Name: sample_hardfiltered
Variants: 1392
Novel Variants: 88 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 1392 541 0/1 847 1/1 4 1/2
Total Gene-associated SNVs 1392 541 0/1 847 1/1 4 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION1
CODON_CHANGE_PLUS_CODON_INSERTION3
FRAME_SHIFT5
MOTIF[MA0139.1:CTCF]1
MOTIF[MA0162.1:Egr1]1
NON_SYNONYMOUS_CODING56
PROTEIN_STRUCTURAL_INTERACTION_LOCUS4
SPLICE_SITE_REGION+SYNONYMOUS_CODING2
START_GAINED1
SYNONYMOUS_CODING78
None0

Type Total Variants
16
MISSENSE56
SILENT80
None0

Type Total Variants
HIGH9
LOW82
MODERATE60
MODIFIER1
None0

Type Total Variants
FisherStrand5
FisherStrand;QualDepth;ReadPosRankSumTest1
FisherStrand;ReadPosRankSumTest1
LowQual319
LowQual;QualByDepth12
LowQual;QualDepth;ReadPosRankSumTest1
LowQual;ReadPosRankSumTest16
LowQual;RMSMapping1
PASS600
QualByDepth6
QualDepth;ReadPosRankSumTest2
ReadPosRankSumTest422
RMSMapping6

Quality Value
Min10.15
Average741.058584770124
Max18143.77

Read Depth Value
Min1
Average36.13433908045977
Max816

Type Total Variants
None0

Chromossome Total Variants
176
10147
1196
1255
1437
1557
16107
1754
1948
2175
201
2291
33
486
649
7168
826
9102
X14