Name: fam3 AWK
Variants: 37078
Novel Variants: 436 (Not in latest DbSNP Build)

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION62
CODON_CHANGE_PLUS_CODON_INSERTION40
CODON_DELETION32
CODON_INSERTION35
FRAME_SHIFT124
FRAME_SHIFT+SPLICE_SITE_REGION22
FRAME_SHIFT+START_LOST3
FRAME_SHIFT+STOP_GAINED5
FRAME_SHIFT+STOP_LOST3
MOTIF[MA0003.1:Ap2alpha]4
MOTIF[MA0024.1:E2F1]2
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0058.1:Max]4
MOTIF[MA0059.1:Cmyc]1
MOTIF[MA0062.1:Gabp]2
MOTIF[MA0062.2:Gabp]7
MOTIF[MA0079.1:SP1]1
MOTIF[MA0079.2:SP1]3
MOTIF[MA0080.1:PU1]1
MOTIF[MA0095.1:Yy1]4
MOTIF[MA0114.1:HNF4A]2
MOTIF[MA0139.1:CTCF]14
MOTIF[MA0147.1:Cmyc]2
MOTIF[MA0162.1:Egr1]4
NON_SYNONYMOUS_CODING8413
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION198
PROTEIN_PROTEIN_INTERACTION_LOCUS6
PROTEIN_STRUCTURAL_INTERACTION_LOCUS234
SPLICE_SITE_REGION16
SPLICE_SITE_REGION+CODON_DELETION1
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING193
START_GAINED146
START_LOST10
STOP_GAINED64
STOP_GAINED+SPLICE_SITE_REGION1
STOP_LOST17
STOP_LOST+SPLICE_SITE_REGION4
SYNONYMOUS_CODING9607
SYNONYMOUS_STOP9
TRANSCRIPT1
None0

Type Total Variants
783
MISSENSE8642
NONSENSE65
SILENT9809
None0

Type Total Variants
HIGH493
LOW9997
MODERATE8782
MODIFIER27
None0

Type Total Variants
PASS37078

Quality Value
Min11.0
Average719.908075948005
Max3853.93

Read Depth Value
Min5
Average119.96143265548304
Max1085

Type Total Variants
None0
2|22
24

Chromossome Total Variants
13854
101567
112509
122018
13687
141143
151244
161623
172354
18611
192766
22424
20889
21479
22803
31910
41474
51634
62130
71582
81392
91492
X489
Y4