Name: allfamilies BIR
Variants: 37739
Novel Variants: 430 (Not in latest DbSNP Build)
| Type | Total Variants |
|---|---|
| CODON_CHANGE_PLUS_CODON_DELETION | 59 |
| CODON_CHANGE_PLUS_CODON_DELETION+SPLICE_SITE_REGION | 1 |
| CODON_CHANGE_PLUS_CODON_INSERTION | 40 |
| CODON_DELETION | 32 |
| CODON_INSERTION | 40 |
| CODON_INSERTION+SPLICE_SITE_REGION | 1 |
| FRAME_SHIFT | 113 |
| FRAME_SHIFT+SPLICE_SITE_REGION | 21 |
| FRAME_SHIFT+START_LOST | 2 |
| FRAME_SHIFT+STOP_GAINED | 5 |
| FRAME_SHIFT+STOP_LOST | 2 |
| MOTIF[MA0003.1:Ap2alpha] | 5 |
| MOTIF[MA0024.1:E2F1] | 3 |
| MOTIF[MA0035.2:Gata1] | 1 |
| MOTIF[MA0047.1:FOXA2] | 1 |
| MOTIF[MA0058.1:Max] | 5 |
| MOTIF[MA0062.1:Gabp] | 2 |
| MOTIF[MA0062.2:Gabp] | 3 |
| MOTIF[MA0079.1:SP1] | 2 |
| MOTIF[MA0079.2:SP1] | 5 |
| MOTIF[MA0080.2:PU1] | 1 |
| MOTIF[MA0093.1:USF1] | 1 |
| MOTIF[MA0095.1:Yy1] | 2 |
| MOTIF[MA0114.1:HNF4A] | 1 |
| MOTIF[MA0139.1:CTCF] | 12 |
| MOTIF[MA0147.1:Cmyc] | 2 |
| MOTIF[MA0154.1:EBF] | 1 |
| MOTIF[MA0162.1:Egr1] | 5 |
| NON_SYNONYMOUS_CODING | 8530 |
| NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION | 195 |
| PROTEIN_PROTEIN_INTERACTION_LOCUS | 4 |
| PROTEIN_STRUCTURAL_INTERACTION_LOCUS | 218 |
| SPLICE_SITE_REGION | 18 |
| SPLICE_SITE_REGION+SYNONYMOUS_CODING | 224 |
| START_GAINED | 124 |
| START_LOST | 7 |
| STOP_GAINED | 65 |
| STOP_GAINED+CODON_INSERTION | 1 |
| STOP_LOST | 17 |
| STOP_LOST+SPLICE_SITE_REGION | 3 |
| SYNONYMOUS_CODING | 9720 |
| SYNONYMOUS_STOP | 10 |
| TRANSCRIPT | 1 |
| None | 0 |
| Type | Total Variants |
|---|---|
| None | 0 |
| Type | Total Variants |
|---|---|
| PASS | 37739 |
| Quality | Value |
|---|---|
| Min | 10.0 |
| Average | 1025.75325705769 |
| Max | 3854.15 |
| Read Depth | Value |
|---|---|
| Min | 5 |
| Average | 145.28127401361985 |
| Max | 1960 |
| Type | Total Variants |
|---|---|
| None | 0 |