Name: 46651510241455_annotated
Variants: 43886
Novel Variants: 434 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 43886 25155 0/1 18697 1/1 34 1/2
Total Gene-associated SNVs 43886 25155 0/1 18697 1/1 34 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION77
CODON_CHANGE_PLUS_CODON_INSERTION54
CODON_DELETION30
CODON_INSERTION57
FRAME_SHIFT187
FRAME_SHIFT+SPLICE_SITE_REGION36
FRAME_SHIFT+START_LOST1
FRAME_SHIFT+STOP_GAINED5
FRAME_SHIFT+STOP_LOST1
MOTIF_DELETED2
MOTIF[MA0003.1:Ap2alpha]5
MOTIF[MA0014.1:Pax5]2
MOTIF[MA0016.1:RXRA]1
MOTIF[MA0024.1:E2F1]1
MOTIF[MA0035.1:Gata1]1
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0047.2:FOXA2]1
MOTIF[MA0058.1:Max]4
MOTIF[MA0062.2:Gabp]7
MOTIF[MA0079.1:SP1]1
MOTIF[MA0079.2:SP1]2
MOTIF[MA0080.1:PU1]1
MOTIF[MA0095.1:Yy1]5
MOTIF[MA0138.2:Nrsf]1
MOTIF[MA0139.1:CTCF]23
MOTIF[MA0147.1:Cmyc]4
MOTIF[MA0162.1:Egr1]1
NON_SYNONYMOUS_CODING9114
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION169
PROTEIN_PROTEIN_INTERACTION_LOCUS4
PROTEIN_STRUCTURAL_INTERACTION_LOCUS224
SPLICE_SITE_REGION17
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING197
START_GAINED86
START_LOST12
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED83
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION1
STOP_LOST15
STOP_LOST+SPLICE_SITE_REGION2
SYNONYMOUS_CODING9977
SYNONYMOUS_STOP8
None0

Type Total Variants
845
MISSENSE9312
NONSENSE84
SILENT10182
None0

Type Total Variants
HIGH573
LOW10319
MODERATE9502
MODIFIER29
None0

Type Total Variants
Indel_QC61
PASS42581
SNP_QC1244

Quality Value
Min30.77
Average2106.18064918186
Max32562.77

Read Depth Value
Min1
Average108.76933418402224
Max1323

Type Total Variants
None0
2|22
24

Chromossome Total Variants
14361
101858
113167
122343
13830
141690
151484
162033
172378
18614
193153
22908
201163
21659
221110
32241
41811
51833
61933
72436
81533
91739
X584
Y25