Name: combined sample_98.variant43
Variants: 161068
Novel Variants: 5113 (Not in latest DbSNP Build)

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION133
CODON_CHANGE_PLUS_CODON_INSERTION114
CODON_DELETION66
CODON_INSERTION98
FRAME_SHIFT363
FRAME_SHIFT+SPLICE_SITE_REGION42
FRAME_SHIFT+START_LOST3
FRAME_SHIFT+STOP_GAINED8
FRAME_SHIFT+STOP_GAINED+SPLICE_SITE_REGION1
FRAME_SHIFT+STOP_LOST6
GENE_FUSION1
GENE_FUSION_REVERESE5
MOTIF_DELETED12
MOTIF[MA0003.1:Ap2alpha]45
MOTIF[MA0014.1:Pax5]4
MOTIF[MA0016.1:RXRA]5
MOTIF[MA0024.1:E2F1]14
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0047.1:FOXA2]1
MOTIF[MA0047.2:FOXA2]1
MOTIF[MA0058.1:Max]22
MOTIF[MA0059.1:Cmyc]11
MOTIF[MA0062.1:Gabp]9
MOTIF[MA0062.2:Gabp]49
MOTIF[MA0065.1:PPARG]1
MOTIF[MA0065.2:PPARG]2
MOTIF[MA0079.1:SP1]16
MOTIF[MA0079.2:SP1]63
MOTIF[MA0080.1:PU1]3
MOTIF[MA0080.2:PU1]5
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]6
MOTIF[MA0095.1:Yy1]16
MOTIF[MA0099.2:AP1]4
MOTIF[MA0105.1:NFKB]1
MOTIF[MA0114.1:HNF4A]14
MOTIF[MA0115.1:RNR1H2]1
MOTIF[MA0138.2:Nrsf]10
MOTIF[MA0139.1:CTCF]114
MOTIF[MA0140.1:Tal1]2
MOTIF[MA0147.1:Cmyc]17
MOTIF[MA0148.1:FOXA1]2
MOTIF[MA0154.1:EBF]9
MOTIF[MA0159.1:RXR]5
MOTIF[MA0162.1:Egr1]74
MOTIF[MA0239.1:Pax5]1
NON_SYNONYMOUS_CODING12189
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION239
NON_SYNONYMOUS_START1
PROTEIN_PROTEIN_INTERACTION_LOCUS6
PROTEIN_STRUCTURAL_INTERACTION_LOCUS254
SPLICE_SITE_REGION129
SPLICE_SITE_REGION+CODON_DELETION2
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING272
START_GAINED625
START_LOST11
START_LOST+CODON_CHANGE_PLUS_CODON_DELETION1
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED131
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION2
STOP_LOST29
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING12327
SYNONYMOUS_STOP16
TRANSCRIPT9
None0

Type Total Variants
2411
MISSENSE12472
NONSENSE133
SILENT12615
None0

Type Total Variants
HIGH868
LOW13647
MODERATE12842
MODIFIER274
None0

Type Total Variants
DRAGENHardINDEL99
DRAGENHardSNP1177
PASS159792

Quality Value
Min30.01
Average1621.78542180943
Max160266.0

Read Depth Value
Min0
Average88.87683462885241
Max4471

Type Total Variants
None0
41
2|21
24
31
5|51

Chromossome Total Variants
115140
106519
119734
129153
132965
145407
155546
166899
179236
183051
1910250
211089
203847
212502
223859
38886
47082
56936
69555
78165
85719
96546
X2860
Y122