Name: tsvc_variants_ioncode_0249
Variants: 36007
Novel Variants: 789 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 36007 23889 0/1 5 0/2 12031 1/1 77 1/2 5 2/2
Total Gene-associated SNVs 36007 23889 0/1 5 0/2 12031 1/1 77 1/2 5 2/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION65
CODON_CHANGE_PLUS_CODON_INSERTION35
CODON_DELETION42
CODON_INSERTION30
FRAME_SHIFT115
FRAME_SHIFT+SPLICE_SITE_REGION28
FRAME_SHIFT+START_LOST1
FRAME_SHIFT+STOP_GAINED2
FRAME_SHIFT+STOP_GAINED+SPLICE_SITE_REGION1
FRAME_SHIFT+STOP_LOST1
MOTIF[MA0003.1:Ap2alpha]4
MOTIF[MA0014.1:Pax5]1
MOTIF[MA0058.1:Max]4
MOTIF[MA0062.1:Gabp]1
MOTIF[MA0062.2:Gabp]3
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]2
MOTIF[MA0079.2:SP1]5
MOTIF[MA0080.1:PU1]1
MOTIF[MA0093.1:USF1]1
MOTIF[MA0095.1:Yy1]3
MOTIF[MA0099.1:Cfos]1
MOTIF[MA0139.1:CTCF]8
MOTIF[MA0147.1:Cmyc]2
MOTIF[MA0162.1:Egr1]2
NON_SYNONYMOUS_CODING8034
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION172
PROTEIN_PROTEIN_INTERACTION_LOCUS3
PROTEIN_STRUCTURAL_INTERACTION_LOCUS226
SPLICE_SITE_REGION11
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING213
START_GAINED126
START_LOST11
STOP_GAINED53
STOP_GAINED+SPLICE_SITE_REGION1
STOP_LOST19
STOP_LOST+SPLICE_SITE_REGION1
SYNONYMOUS_CODING9622
SYNONYMOUS_STOP12
TRANSCRIPT1
None0

Type Total Variants
None0

Type Total Variants
HIGH462
LOW10005
MODERATE8379
MODIFIER19
None0

Type Total Variants
PASS36007

Quality Value
Min10.0
Average359.540024017552
Max2982.21

Read Depth Value
Min24
Average113.5464493015247
Max1033

Type Total Variants
None0

Chromossome Total Variants
13674
101298
112403
121748
13528
141104
151109
161991
172439
18576
193079
22276
201046
21477
22990
31911
41242
51538
61960
71592
81171
91488
X366
Y1