Name: combined sample_92.variant37
Variants: 167421
Novel Variants: 5488 (Not in latest DbSNP Build)

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION135
CODON_CHANGE_PLUS_CODON_INSERTION109
CODON_DELETION52
CODON_INSERTION123
FRAME_SHIFT373
FRAME_SHIFT+SPLICE_SITE_REGION43
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED9
FRAME_SHIFT+STOP_LOST3
GENE_FUSION1
GENE_FUSION_REVERESE2
MOTIF_DELETED12
MOTIF[MA0003.1:Ap2alpha]43
MOTIF[MA0014.1:Pax5]7
MOTIF[MA0016.1:RXRA]5
MOTIF[MA0024.1:E2F1]8
MOTIF[MA0036.1:Gata2]2
MOTIF[MA0047.1:FOXA2]1
MOTIF[MA0047.2:FOXA2]3
MOTIF[MA0058.1:Max]22
MOTIF[MA0059.1:Cmyc]13
MOTIF[MA0062.1:Gabp]15
MOTIF[MA0062.2:Gabp]50
MOTIF[MA0065.1:PPARG]1
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]22
MOTIF[MA0079.2:SP1]51
MOTIF[MA0080.1:PU1]1
MOTIF[MA0080.2:PU1]4
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]8
MOTIF[MA0095.1:Yy1]14
MOTIF[MA0099.1:Cfos]1
MOTIF[MA0099.2:AP1]4
MOTIF[MA0114.1:HNF4A]16
MOTIF[MA0115.1:RNR1H2]1
MOTIF[MA0138.2:Nrsf]9
MOTIF[MA0139.1:CTCF]123
MOTIF[MA0140.1:Tal1]3
MOTIF[MA0147.1:Cmyc]22
MOTIF[MA0148.1:FOXA1]2
MOTIF[MA0154.1:EBF]4
MOTIF[MA0159.1:RXR]2
MOTIF[MA0162.1:Egr1]80
MOTIF[MA0239.1:Pax5]1
NON_SYNONYMOUS_CODING12784
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION261
NON_SYNONYMOUS_START3
PROTEIN_PROTEIN_INTERACTION_LOCUS5
PROTEIN_STRUCTURAL_INTERACTION_LOCUS286
SPLICE_SITE_REGION128
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_DELETION2
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING283
START_GAINED658
START_LOST14
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
START_LOST+CODON_DELETION1
STOP_GAINED133
STOP_GAINED+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION2
STOP_LOST28
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING12972
SYNONYMOUS_STOP10
TRANSCRIPT12
None0

Type Total Variants
2503
MISSENSE13093
NONSENSE135
SILENT13265
None0

Type Total Variants
HIGH910
LOW14326
MODERATE13468
MODIFIER292
None0

Type Total Variants
DRAGENHardINDEL85
DRAGENHardSNP1266
PASS166070

Quality Value
Min30.0
Average1607.10465455348
Max160266.0

Read Depth Value
Min0
Average92.97765513286863
Max4137

Type Total Variants
None0
2|21
26

Chromossome Total Variants
115980
107510
1110499
129433
133019
145861
155496
167257
178853
183127
1910637
211578
204569
212397
223926
39412
47027
57436
69701
78455
86290
96398
X2438
Y122