Name: combined sample_71.variant32
Variants: 157914
Novel Variants: 5302 (Not in latest DbSNP Build)

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION136
CODON_CHANGE_PLUS_CODON_DELETION+SPLICE_SITE_REGION1
CODON_CHANGE_PLUS_CODON_INSERTION104
CODON_DELETION54
CODON_DELETION+SPLICE_SITE_REGION2
CODON_INSERTION98
CODON_INSERTION+SPLICE_SITE_REGION1
FRAME_SHIFT362
FRAME_SHIFT+SPLICE_SITE_REGION45
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED7
FRAME_SHIFT+STOP_LOST4
GENE_FUSION_REVERESE3
MOTIF_DELETED12
MOTIF[MA0003.1:Ap2alpha]49
MOTIF[MA0014.1:Pax5]4
MOTIF[MA0016.1:RXRA]5
MOTIF[MA0024.1:E2F1]9
MOTIF[MA0035.2:Gata1]2
MOTIF[MA0036.1:Gata2]2
MOTIF[MA0047.1:FOXA2]1
MOTIF[MA0058.1:Max]17
MOTIF[MA0059.1:Cmyc]9
MOTIF[MA0062.1:Gabp]18
MOTIF[MA0062.2:Gabp]48
MOTIF[MA0065.1:PPARG]2
MOTIF[MA0065.2:PPARG]2
MOTIF[MA0079.1:SP1]13
MOTIF[MA0079.2:SP1]47
MOTIF[MA0080.1:PU1]3
MOTIF[MA0080.2:PU1]5
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]4
MOTIF[MA0095.1:Yy1]15
MOTIF[MA0099.1:Cfos]2
MOTIF[MA0099.2:AP1]3
MOTIF[MA0114.1:HNF4A]14
MOTIF[MA0115.1:RNR1H2]1
MOTIF[MA0138.1:Nrsf]2
MOTIF[MA0138.2:Nrsf]10
MOTIF[MA0139.1:CTCF]114
MOTIF[MA0140.1:Tal1]1
MOTIF[MA0147.1:Cmyc]21
MOTIF[MA0148.1:FOXA1]1
MOTIF[MA0154.1:EBF]7
MOTIF[MA0159.1:RXR]1
MOTIF[MA0162.1:Egr1]65
MOTIF[MA0239.1:Pax5]1
NON_SYNONYMOUS_CODING11909
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION256
NON_SYNONYMOUS_START2
PROTEIN_PROTEIN_INTERACTION_LOCUS4
PROTEIN_STRUCTURAL_INTERACTION_LOCUS268
SPLICE_SITE_REGION122
SPLICE_SITE_REGION+SYNONYMOUS_CODING255
START_GAINED580
START_LOST9
START_LOST+CODON_CHANGE_PLUS_CODON_DELETION1
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
START_LOST+CODON_DELETION1
STOP_GAINED121
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION2
STOP_LOST26
STOP_LOST+SPLICE_SITE_REGION4
SYNONYMOUS_CODING11945
SYNONYMOUS_STOP11
TRANSCRIPT12
None0

Type Total Variants
2322
MISSENSE12206
NONSENSE123
SILENT12211
None0

Type Total Variants
HIGH863
LOW13173
MODERATE12561
MODIFIER265
None0

Type Total Variants
DRAGENHardINDEL107
DRAGENHardSNP1179
PASS156628

Quality Value
Min30.01
Average1627.42155173068
Max160266.0

Read Depth Value
Min0
Average92.46846384741062
Max4217

Type Total Variants
None0

Chromossome Total Variants
115068
106785
119747
128699
133124
145206
155448
166602
178797
183011
199928
210915
204017
212309
224235
38996
46794
56864
68917
78255
85880
95998
X2161
Y158