Name: combined sample_70.variant31
Variants: 159887
Novel Variants: 5645 (Not in latest DbSNP Build)

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION131
CODON_CHANGE_PLUS_CODON_INSERTION125
CODON_DELETION66
CODON_INSERTION99
FRAME_SHIFT365
FRAME_SHIFT+SPLICE_SITE_REGION42
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED8
FRAME_SHIFT+STOP_GAINED+SPLICE_SITE_REGION1
FRAME_SHIFT+STOP_LOST4
GENE_FUSION_REVERESE2
MOTIF_DELETED14
MOTIF[MA0003.1:Ap2alpha]45
MOTIF[MA0014.1:Pax5]11
MOTIF[MA0016.1:RXRA]1
MOTIF[MA0024.1:E2F1]12
MOTIF[MA0035.2:Gata1]2
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0058.1:Max]19
MOTIF[MA0059.1:Cmyc]9
MOTIF[MA0062.1:Gabp]17
MOTIF[MA0062.2:Gabp]48
MOTIF[MA0065.1:PPARG]2
MOTIF[MA0065.2:PPARG]2
MOTIF[MA0079.1:SP1]14
MOTIF[MA0079.2:SP1]53
MOTIF[MA0080.1:PU1]4
MOTIF[MA0080.2:PU1]5
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]6
MOTIF[MA0095.1:Yy1]14
MOTIF[MA0099.2:AP1]2
MOTIF[MA0105.1:NFKB]2
MOTIF[MA0114.1:HNF4A]12
MOTIF[MA0115.1:RNR1H2]1
MOTIF[MA0138.2:Nrsf]9
MOTIF[MA0139.1:CTCF]106
MOTIF[MA0147.1:Cmyc]22
MOTIF[MA0148.1:FOXA1]2
MOTIF[MA0154.1:EBF]6
MOTIF[MA0159.1:RXR]1
MOTIF[MA0162.1:Egr1]70
MOTIF[MA0239.1:Pax5]1
NON_SYNONYMOUS_CODING11993
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION238
NON_SYNONYMOUS_START3
PROTEIN_PROTEIN_INTERACTION_LOCUS4
PROTEIN_STRUCTURAL_INTERACTION_LOCUS267
SPLICE_SITE_REGION122
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_DELETION3
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING267
START_GAINED606
START_LOST11
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED132
STOP_GAINED+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION3
STOP_LOST26
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING12118
SYNONYMOUS_STOP11
TRANSCRIPT5
None0

Type Total Variants
2373
MISSENSE12274
NONSENSE135
SILENT12396
None0

Type Total Variants
HIGH875
LOW13392
MODERATE12657
MODIFIER254
None0

Type Total Variants
DRAGENHardINDEL102
DRAGENHardSNP1355
PASS158430

Quality Value
Min30.01
Average1617.69185262092
Max246343.0

Read Depth Value
Min1
Average104.48740047658659
Max5063

Type Total Variants
None0
41
2|22
26
5|51

Chromossome Total Variants
115678
106692
119418
128622
132956
145637
155479
167021
179012
182945
1910214
211003
203934
212451
223950
39019
46628
56892
69309
78414
85805
96271
X2396
Y141