Name: combined sample_69.variant30
Variants: 154221
Novel Variants: 4408 (Not in latest DbSNP Build)

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION142
CODON_CHANGE_PLUS_CODON_INSERTION114
CODON_DELETION53
CODON_INSERTION99
FRAME_SHIFT348
FRAME_SHIFT+SPLICE_SITE_REGION43
FRAME_SHIFT+START_LOST6
FRAME_SHIFT+STOP_GAINED8
FRAME_SHIFT+STOP_LOST4
GENE_FUSION_REVERESE2
MOTIF_DELETED11
MOTIF[MA0003.1:Ap2alpha]40
MOTIF[MA0014.1:Pax5]7
MOTIF[MA0016.1:RXRA]4
MOTIF[MA0024.1:E2F1]10
MOTIF[MA0035.2:Gata1]2
MOTIF[MA0036.1:Gata2]2
MOTIF[MA0047.1:FOXA2]1
MOTIF[MA0047.2:FOXA2]1
MOTIF[MA0058.1:Max]25
MOTIF[MA0059.1:Cmyc]8
MOTIF[MA0062.1:Gabp]13
MOTIF[MA0062.2:Gabp]50
MOTIF[MA0065.1:PPARG]1
MOTIF[MA0079.1:SP1]15
MOTIF[MA0079.2:SP1]46
MOTIF[MA0080.1:PU1]2
MOTIF[MA0080.2:PU1]6
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]13
MOTIF[MA0095.1:Yy1]14
MOTIF[MA0099.1:Cfos]2
MOTIF[MA0099.2:AP1]4
MOTIF[MA0114.1:HNF4A]11
MOTIF[MA0115.1:RNR1H2]1
MOTIF[MA0138.1:Nrsf]2
MOTIF[MA0138.2:Nrsf]11
MOTIF[MA0139.1:CTCF]111
MOTIF[MA0140.1:Tal1]2
MOTIF[MA0147.1:Cmyc]18
MOTIF[MA0154.1:EBF]8
MOTIF[MA0159.1:RXR]1
MOTIF[MA0162.1:Egr1]73
MOTIF[MA0239.1:Pax5]1
NON_SYNONYMOUS_CODING11962
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION246
NON_SYNONYMOUS_START4
PROTEIN_PROTEIN_INTERACTION_LOCUS2
PROTEIN_STRUCTURAL_INTERACTION_LOCUS274
SPLICE_SITE_REGION120
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_DELETION2
SPLICE_SITE_REGION+CODON_INSERTION2
SPLICE_SITE_REGION+SYNONYMOUS_CODING270
START_GAINED616
START_LOST11
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
START_LOST+CODON_INSERTION1
STOP_GAINED135
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION4
STOP_LOST30
STOP_LOST+SPLICE_SITE_REGION2
SYNONYMOUS_CODING12194
SYNONYMOUS_STOP14
TRANSCRIPT11
None0

Type Total Variants
2367
MISSENSE12255
NONSENSE139
SILENT12478
None0

Type Total Variants
HIGH872
LOW13480
MODERATE12621
MODIFIER266
None0

Type Total Variants
DRAGENHardINDEL79
DRAGENHardSNP1112
PASS153030

Quality Value
Min30.0
Average1677.77440750613
Max246343.0

Read Depth Value
Min1
Average76.96075112987207
Max3605

Type Total Variants
None0
2|22
25
31

Chromossome Total Variants
114684
106561
119679
128582
132844
145321
155432
166749
178556
182958
1910005
210532
204021
212294
223787
38818
46612
56636
68581
78186
85271
95933
X2049
Y130