Name: combined sample_64.variant26
Variants: 160962
Novel Variants: 5256 (Not in latest DbSNP Build)

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION125
CODON_CHANGE_PLUS_CODON_INSERTION106
CODON_DELETION62
CODON_INSERTION102
FRAME_SHIFT401
FRAME_SHIFT+SPLICE_SITE_REGION42
FRAME_SHIFT+START_LOST3
FRAME_SHIFT+STOP_GAINED6
FRAME_SHIFT+STOP_LOST4
GENE_FUSION1
GENE_FUSION_REVERESE2
MOTIF_DELETED13
MOTIF[MA0003.1:Ap2alpha]40
MOTIF[MA0014.1:Pax5]6
MOTIF[MA0016.1:RXRA]3
MOTIF[MA0024.1:E2F1]11
MOTIF[MA0035.2:Gata1]2
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0047.1:FOXA2]1
MOTIF[MA0047.2:FOXA2]1
MOTIF[MA0058.1:Max]16
MOTIF[MA0059.1:Cmyc]8
MOTIF[MA0062.1:Gabp]11
MOTIF[MA0062.2:Gabp]46
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]15
MOTIF[MA0079.2:SP1]59
MOTIF[MA0080.1:PU1]6
MOTIF[MA0080.2:PU1]5
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]8
MOTIF[MA0095.1:Yy1]17
MOTIF[MA0099.1:Cfos]2
MOTIF[MA0099.2:AP1]2
MOTIF[MA0105.1:NFKB]1
MOTIF[MA0114.1:HNF4A]11
MOTIF[MA0138.1:Nrsf]1
MOTIF[MA0138.2:Nrsf]11
MOTIF[MA0139.1:CTCF]98
MOTIF[MA0140.1:Tal1]1
MOTIF[MA0147.1:Cmyc]18
MOTIF[MA0148.1:FOXA1]1
MOTIF[MA0154.1:EBF]5
MOTIF[MA0162.1:Egr1]88
MOTIF[MA0239.1:Pax5]1
NON_SYNONYMOUS_CODING12254
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION246
NON_SYNONYMOUS_START1
PROTEIN_PROTEIN_INTERACTION_LOCUS7
PROTEIN_STRUCTURAL_INTERACTION_LOCUS266
SPLICE_SITE_REGION131
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_DELETION1
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING267
START_GAINED651
START_LOST12
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED136
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION3
STOP_LOST28
STOP_LOST+SPLICE_SITE_REGION4
SYNONYMOUS_CODING12284
SYNONYMOUS_STOP15
TRANSCRIPT8
None0

Type Total Variants
2433
MISSENSE12545
NONSENSE139
SILENT12566
None0

Type Total Variants
HIGH917
LOW13615
MODERATE12898
MODIFIER253
None0

Type Total Variants
DRAGENHardINDEL92
DRAGENHardSNP1252
PASS159618

Quality Value
Min30.0
Average1619.5162481828
Max246343.0

Read Depth Value
Min0
Average103.99327791652688
Max2685

Type Total Variants
None0
41
2|22
23
5|51

Chromossome Total Variants
115719
106548
119904
128799
132842
145499
155613
166795
178880
182926
1910736
210686
203875
212362
224001
39288
46903
57112
69766
78154
85767
96409
X2206
Y172