Name: combined sample_62.variant24
Variants: 161794
Novel Variants: 5659 (Not in latest DbSNP Build)

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION133
CODON_CHANGE_PLUS_CODON_INSERTION102
CODON_DELETION66
CODON_INSERTION99
FRAME_SHIFT362
FRAME_SHIFT+SPLICE_SITE_REGION44
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED7
FRAME_SHIFT+STOP_LOST3
GENE_FUSION1
GENE_FUSION_REVERESE2
MOTIF_DELETED17
MOTIF[MA0003.1:Ap2alpha]37
MOTIF[MA0014.1:Pax5]7
MOTIF[MA0016.1:RXRA]4
MOTIF[MA0024.1:E2F1]13
MOTIF[MA0035.2:Gata1]2
MOTIF[MA0036.1:Gata2]2
MOTIF[MA0047.1:FOXA2]1
MOTIF[MA0058.1:Max]23
MOTIF[MA0059.1:Cmyc]6
MOTIF[MA0062.1:Gabp]15
MOTIF[MA0062.2:Gabp]47
MOTIF[MA0065.2:PPARG]2
MOTIF[MA0079.1:SP1]27
MOTIF[MA0079.2:SP1]55
MOTIF[MA0080.1:PU1]4
MOTIF[MA0080.2:PU1]4
MOTIF[MA0083.1:Srf]3
MOTIF[MA0093.1:USF1]9
MOTIF[MA0095.1:Yy1]17
MOTIF[MA0099.1:Cfos]2
MOTIF[MA0099.2:AP1]4
MOTIF[MA0105.1:NFKB]1
MOTIF[MA0114.1:HNF4A]14
MOTIF[MA0138.1:Nrsf]2
MOTIF[MA0138.2:Nrsf]7
MOTIF[MA0139.1:CTCF]109
MOTIF[MA0140.1:Tal1]2
MOTIF[MA0147.1:Cmyc]18
MOTIF[MA0148.1:FOXA1]1
MOTIF[MA0154.1:EBF]5
MOTIF[MA0159.1:RXR]1
MOTIF[MA0162.1:Egr1]70
MOTIF[MA0239.1:Pax5]1
NON_SYNONYMOUS_CODING12215
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION252
NON_SYNONYMOUS_START1
PROTEIN_PROTEIN_INTERACTION_LOCUS6
PROTEIN_STRUCTURAL_INTERACTION_LOCUS261
SPLICE_SITE_REGION121
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_DELETION3
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING255
START_GAINED611
START_LOST16
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED130
STOP_GAINED+CODON_CHANGE_PLUS_CODON_DELETION1
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION2
STOP_LOST30
STOP_LOST+SPLICE_SITE_REGION2
SYNONYMOUS_CODING12292
SYNONYMOUS_STOP10
TRANSCRIPT11
None0

Type Total Variants
2373
MISSENSE12516
NONSENSE132
SILENT12557
None0

Type Total Variants
HIGH873
LOW13557
MODERATE12872
MODIFIER276
None0

Type Total Variants
DRAGENHardINDEL109
DRAGENHardSNP1309
PASS160376

Quality Value
Min30.06
Average1617.39308015131
Max160266.0

Read Depth Value
Min0
Average100.04451339357455
Max4952

Type Total Variants
None0
2|21
23

Chromossome Total Variants
115617
106741
119869
128579
132956
145386
155550
167045
178808
183195
1910599
211325
204040
212571
224055
38910
46797
57024
69592
78216
85989
96468
X2284
Y178