Name: combined sample_59.variant21
Variants: 159089
Novel Variants: 5478 (Not in latest DbSNP Build)

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION137
CODON_CHANGE_PLUS_CODON_INSERTION110
CODON_DELETION61
CODON_INSERTION100
FRAME_SHIFT340
FRAME_SHIFT+SPLICE_SITE_REGION44
FRAME_SHIFT+START_LOST5
FRAME_SHIFT+STOP_GAINED6
FRAME_SHIFT+STOP_LOST4
GENE_FUSION1
GENE_FUSION_REVERESE2
MOTIF_DELETED16
MOTIF[MA0003.1:Ap2alpha]49
MOTIF[MA0014.1:Pax5]7
MOTIF[MA0016.1:RXRA]5
MOTIF[MA0024.1:E2F1]13
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0047.1:FOXA2]1
MOTIF[MA0047.2:FOXA2]1
MOTIF[MA0058.1:Max]21
MOTIF[MA0059.1:Cmyc]8
MOTIF[MA0062.1:Gabp]10
MOTIF[MA0062.2:Gabp]52
MOTIF[MA0065.1:PPARG]2
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]19
MOTIF[MA0079.2:SP1]48
MOTIF[MA0080.1:PU1]6
MOTIF[MA0080.2:PU1]6
MOTIF[MA0083.1:Srf]2
MOTIF[MA0093.1:USF1]8
MOTIF[MA0095.1:Yy1]15
MOTIF[MA0099.1:Cfos]2
MOTIF[MA0099.2:AP1]4
MOTIF[MA0105.1:NFKB]1
MOTIF[MA0114.1:HNF4A]13
MOTIF[MA0115.1:RNR1H2]1
MOTIF[MA0138.1:Nrsf]1
MOTIF[MA0138.2:Nrsf]12
MOTIF[MA0139.1:CTCF]116
MOTIF[MA0140.1:Tal1]2
MOTIF[MA0147.1:Cmyc]20
MOTIF[MA0154.1:EBF]7
MOTIF[MA0159.1:RXR]2
MOTIF[MA0162.1:Egr1]66
MOTIF[MA0239.1:Pax5]1
NON_SYNONYMOUS_CODING12057
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION252
NON_SYNONYMOUS_START1
PROTEIN_PROTEIN_INTERACTION_LOCUS3
PROTEIN_STRUCTURAL_INTERACTION_LOCUS266
SPLICE_SITE_REGION130
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_DELETION1
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING263
START_GAINED599
START_LOST12
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED145
STOP_GAINED+CODON_INSERTION2
STOP_GAINED+SPLICE_SITE_REGION4
STOP_LOST30
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING11981
SYNONYMOUS_STOP13
TRANSCRIPT8
None0

Type Total Variants
2362
MISSENSE12355
NONSENSE149
SILENT12257
None0

Type Total Variants
HIGH868
LOW13266
MODERATE12720
MODIFIER269
None0

Type Total Variants
DRAGENHardINDEL89
DRAGENHardSNP1287
PASS157713

Quality Value
Min30.01
Average1625.30572924589
Max246343.0

Read Depth Value
Min0
Average105.58676589833364
Max4305

Type Total Variants
None0
2|22
24
5|51

Chromossome Total Variants
115526
106642
119608
128808
133006
145561
155548
166981
178701
183002
1910299
210848
203942
212403
223991
39151
46793
56765
69454
78014
85647
96142
X2147
Y110