Name: combined sample_56.variant19
Variants: 161621
Novel Variants: 5583 (Not in latest DbSNP Build)

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION128
CODON_CHANGE_PLUS_CODON_INSERTION117
CODON_DELETION69
CODON_INSERTION102
FRAME_SHIFT351
FRAME_SHIFT+SPLICE_SITE_REGION44
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED6
FRAME_SHIFT+STOP_LOST5
GENE_FUSION4
GENE_FUSION_REVERESE1
MOTIF_DELETED16
MOTIF[MA0003.1:Ap2alpha]44
MOTIF[MA0014.1:Pax5]7
MOTIF[MA0016.1:RXRA]3
MOTIF[MA0024.1:E2F1]12
MOTIF[MA0035.2:Gata1]2
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0047.1:FOXA2]2
MOTIF[MA0047.2:FOXA2]1
MOTIF[MA0058.1:Max]20
MOTIF[MA0059.1:Cmyc]10
MOTIF[MA0062.1:Gabp]12
MOTIF[MA0062.2:Gabp]53
MOTIF[MA0065.1:PPARG]1
MOTIF[MA0065.2:PPARG]3
MOTIF[MA0079.1:SP1]20
MOTIF[MA0079.2:SP1]63
MOTIF[MA0080.1:PU1]1
MOTIF[MA0080.2:PU1]8
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]8
MOTIF[MA0095.1:Yy1]15
MOTIF[MA0099.1:Cfos]1
MOTIF[MA0099.2:AP1]6
MOTIF[MA0105.1:NFKB]1
MOTIF[MA0114.1:HNF4A]10
MOTIF[MA0138.1:Nrsf]1
MOTIF[MA0138.2:Nrsf]14
MOTIF[MA0139.1:CTCF]116
MOTIF[MA0147.1:Cmyc]17
MOTIF[MA0148.1:FOXA1]1
MOTIF[MA0154.1:EBF]7
MOTIF[MA0162.1:Egr1]69
MOTIF[MA0239.1:Pax5]1
NON_SYNONYMOUS_CODING12326
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION240
NON_SYNONYMOUS_START3
PROTEIN_PROTEIN_INTERACTION_LOCUS5
PROTEIN_STRUCTURAL_INTERACTION_LOCUS274
SPLICE_SITE_REGION119
SPLICE_SITE_REGION+CODON_DELETION1
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING275
START_GAINED659
START_LOST15
START_LOST+CODON_CHANGE_PLUS_CODON_DELETION1
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED140
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION2
STOP_LOST26
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING12368
SYNONYMOUS_STOP13
TRANSCRIPT7
None0

Type Total Variants
2447
MISSENSE12613
NONSENSE142
SILENT12656
None0

Type Total Variants
HIGH883
LOW13726
MODERATE12984
MODIFIER265
None0

Type Total Variants
DRAGENHardINDEL93
DRAGENHardSNP1260
PASS160268

Quality Value
Min30.01
Average1623.57775499469
Max246343.0

Read Depth Value
Min0
Average101.09689953657012
Max3976

Type Total Variants
None0
2|22
21
5|51

Chromossome Total Variants
115031
106674
119710
129095
132960
145418
155616
167302
179090
183015
1910474
211072
203949
212338
224132
38976
46961
57187
68975
78425
85646
96474
X2880
Y221