Name: 62455815_s29 mvar
Variants: 87431
Novel Variants: 8341 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 87431 54423 0/1 87 0/2 10 0/3 32786 1/1 104 2/2 21 3/3
Total Gene-associated SNVs 87431 54423 0/1 87 0/2 10 0/3 32786 1/1 104 2/2 21 3/3

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION64
CODON_CHANGE_PLUS_CODON_INSERTION81
CODON_DELETION126
CODON_INSERTION125
FRAME_SHIFT183
FRAME_SHIFT+NON_SYNONYMOUS_CODING2
FRAME_SHIFT+SPLICE_SITE_REGION43
FRAME_SHIFT+START_LOST1
FRAME_SHIFT+STOP_GAINED2
FRAME_SHIFT+STOP_GAINED+SPLICE_SITE_REGION2
FRAME_SHIFT+STOP_LOST3
MOTIF[MA0003.1:Ap2alpha]16
MOTIF[MA0014.1:Pax5]2
MOTIF[MA0016.1:RXRA]2
MOTIF[MA0024.1:E2F1]3
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0058.1:Max]10
MOTIF[MA0059.1:Cmyc]3
MOTIF[MA0062.1:Gabp]1
MOTIF[MA0062.2:Gabp]18
MOTIF[MA0065.1:PPARG]3
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]2
MOTIF[MA0079.2:SP1]11
MOTIF[MA0080.2:PU1]2
MOTIF[MA0093.1:USF1]4
MOTIF[MA0095.1:Yy1]4
MOTIF[MA0099.1:Cfos]2
MOTIF[MA0099.2:AP1]1
MOTIF[MA0114.1:HNF4A]1
MOTIF[MA0138.2:Nrsf]5
MOTIF[MA0139.1:CTCF]51
MOTIF[MA0147.1:Cmyc]5
MOTIF[MA0154.1:EBF]1
MOTIF[MA0162.1:Egr1]17
NON_SYNONYMOUS_CODING11818
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION227
NON_SYNONYMOUS_START2
NON_SYNONYMOUS_START+SPLICE_SITE_REGION1
PROTEIN_PROTEIN_INTERACTION_LOCUS5
PROTEIN_STRUCTURAL_INTERACTION_LOCUS266
SPLICE_SITE_REGION32
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION2
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_INSERTION1
SPLICE_SITE_REGION+CODON_DELETION2
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING248
START_GAINED207
START_LOST13
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED133
STOP_GAINED+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED+CODON_INSERTION5
STOP_GAINED+SPLICE_SITE_REGION2
STOP_LOST32
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING12137
SYNONYMOUS_CODING+CODON_DELETION1
SYNONYMOUS_STOP7
TRANSCRIPT1
None0

Type Total Variants
None0

Type Total Variants
HIGH697
LOW12712
MODERATE12448
MODIFIER89
None0

Type Total Variants
PASS87431

Quality Value
Min10.04
Average1288.31698162006
Max51698.8

Read Depth Value
Min0
Average0.0
Max0

Type Total Variants
None0

Chromossome Total Variants
18591
103753
115461
124735
131474
143087
153016
164166
174973
181416
196147
25726
202216
211217
222352
34614
43262
53538
65240
74651
82941
93623
X1159
Y73