Name: combined sample_46.variant10
Variants: 169643
Novel Variants: 5849 (Not in latest DbSNP Build)

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION134
CODON_CHANGE_PLUS_CODON_INSERTION116
CODON_DELETION64
CODON_INSERTION109
FRAME_SHIFT359
FRAME_SHIFT+SPLICE_SITE_REGION44
FRAME_SHIFT+START_LOST6
FRAME_SHIFT+STOP_GAINED7
FRAME_SHIFT+STOP_LOST5
GENE_FUSION1
GENE_FUSION_REVERESE3
MOTIF_DELETED13
MOTIF[MA0003.1:Ap2alpha]46
MOTIF[MA0014.1:Pax5]4
MOTIF[MA0016.1:RXRA]6
MOTIF[MA0024.1:E2F1]13
MOTIF[MA0035.2:Gata1]2
MOTIF[MA0036.1:Gata2]2
MOTIF[MA0047.1:FOXA2]1
MOTIF[MA0047.2:FOXA2]2
MOTIF[MA0058.1:Max]20
MOTIF[MA0059.1:Cmyc]11
MOTIF[MA0062.1:Gabp]14
MOTIF[MA0062.2:Gabp]58
MOTIF[MA0065.1:PPARG]1
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]16
MOTIF[MA0079.2:SP1]61
MOTIF[MA0080.1:PU1]4
MOTIF[MA0080.2:PU1]8
MOTIF[MA0093.1:USF1]9
MOTIF[MA0095.1:Yy1]17
MOTIF[MA0099.2:AP1]4
MOTIF[MA0114.1:HNF4A]14
MOTIF[MA0115.1:RNR1H2]1
MOTIF[MA0138.1:Nrsf]2
MOTIF[MA0138.2:Nrsf]10
MOTIF[MA0139.1:CTCF]114
MOTIF[MA0140.1:Tal1]3
MOTIF[MA0147.1:Cmyc]19
MOTIF[MA0148.1:FOXA1]2
MOTIF[MA0154.1:EBF]9
MOTIF[MA0159.1:RXR]1
MOTIF[MA0162.1:Egr1]68
NON_SYNONYMOUS_CODING12722
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION255
NON_SYNONYMOUS_START1
PROTEIN_PROTEIN_INTERACTION_LOCUS5
PROTEIN_STRUCTURAL_INTERACTION_LOCUS293
SPLICE_SITE_REGION127
SPLICE_SITE_REGION+CODON_DELETION1
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING289
START_GAINED683
START_LOST14
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED154
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION3
STOP_GAINED+SPLICE_SITE_REGION+CODON_INSERTION1
STOP_LOST28
STOP_LOST+SPLICE_SITE_REGION4
SYNONYMOUS_CODING13017
SYNONYMOUS_STOP14
TRANSCRIPT13
None0

Type Total Variants
2530
MISSENSE13024
NONSENSE157
SILENT13320
None0

Type Total Variants
HIGH929
LOW14418
MODERATE13402
MODIFIER282
None0

Type Total Variants
DRAGENHardINDEL105
DRAGENHardSNP1348
PASS168190

Quality Value
Min30.01
Average1591.3973277412
Max160266.0

Read Depth Value
Min0
Average92.65719776235979
Max4844

Type Total Variants
None0
2|22
26
5|51

Chromossome Total Variants
116625
106945
1110362
129039
133061
146178
155966
166920
179525
183214
1910508
211897
204451
212538
224322
39455
47580
57335
69354
78898
86180
96712
X2408
Y170