Name: combined sample_40.variant4
Variants: 160850
Novel Variants: 5832 (Not in latest DbSNP Build)

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION126
CODON_CHANGE_PLUS_CODON_DELETION+SPLICE_SITE_REGION1
CODON_CHANGE_PLUS_CODON_INSERTION111
CODON_DELETION54
CODON_DELETION+SPLICE_SITE_REGION1
CODON_INSERTION111
CODON_INSERTION+SPLICE_SITE_REGION1
FRAME_SHIFT365
FRAME_SHIFT+SPLICE_SITE_REGION44
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED8
FRAME_SHIFT+STOP_LOST4
GENE_FUSION4
GENE_FUSION_REVERESE3
MOTIF_DELETED15
MOTIF[MA0003.1:Ap2alpha]42
MOTIF[MA0014.1:Pax5]5
MOTIF[MA0016.1:RXRA]4
MOTIF[MA0024.1:E2F1]11
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0047.2:FOXA2]1
MOTIF[MA0058.1:Max]15
MOTIF[MA0059.1:Cmyc]7
MOTIF[MA0062.1:Gabp]12
MOTIF[MA0062.2:Gabp]50
MOTIF[MA0065.1:PPARG]1
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]14
MOTIF[MA0079.2:SP1]58
MOTIF[MA0080.1:PU1]2
MOTIF[MA0080.2:PU1]5
MOTIF[MA0093.1:USF1]10
MOTIF[MA0095.1:Yy1]12
MOTIF[MA0099.1:Cfos]2
MOTIF[MA0099.2:AP1]2
MOTIF[MA0105.1:NFKB]1
MOTIF[MA0114.1:HNF4A]13
MOTIF[MA0115.1:RNR1H2]1
MOTIF[MA0138.1:Nrsf]1
MOTIF[MA0138.2:Nrsf]5
MOTIF[MA0139.1:CTCF]123
MOTIF[MA0140.1:Tal1]1
MOTIF[MA0147.1:Cmyc]23
MOTIF[MA0148.1:FOXA1]1
MOTIF[MA0154.1:EBF]6
MOTIF[MA0159.1:RXR]1
MOTIF[MA0162.1:Egr1]85
MOTIF[MA0239.1:Pax5]1
NON_SYNONYMOUS_CODING12118
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION245
NON_SYNONYMOUS_START1
PROTEIN_PROTEIN_INTERACTION_LOCUS2
PROTEIN_STRUCTURAL_INTERACTION_LOCUS285
SPLICE_SITE_REGION126
SPLICE_SITE_REGION+SYNONYMOUS_CODING249
SPLICE_SITE_REGION+SYNONYMOUS_STOP1
START_GAINED610
START_LOST13
START_LOST+CODON_CHANGE_PLUS_CODON_DELETION1
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED122
STOP_GAINED+CODON_INSERTION2
STOP_GAINED+SPLICE_SITE_REGION3
STOP_LOST30
STOP_LOST+SPLICE_SITE_REGION4
SYNONYMOUS_CODING12184
SYNONYMOUS_STOP19
TRANSCRIPT9
None0

Type Total Variants
2406
MISSENSE12411
NONSENSE125
SILENT12453
None0

Type Total Variants
HIGH895
LOW13451
MODERATE12768
MODIFIER281
None0

Type Total Variants
DRAGENHardINDEL113
DRAGENHardSNP1460
PASS159277

Quality Value
Min30.01
Average1639.97071451664
Max246343.0

Read Depth Value
Min0
Average105.41281317998136
Max5029

Type Total Variants
None0

Chromossome Total Variants
115318
106861
119515
128720
133050
145522
155504
166854
178930
183125
1910179
211196
203973
212436
224064
39193
47011
57030
69424
78325
85864
96370
X2228
Y158