Name: combined sample_39.variant3
Variants: 162050
Novel Variants: 6227 (Not in latest DbSNP Build)

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION135
CODON_CHANGE_PLUS_CODON_DELETION+SPLICE_SITE_REGION1
CODON_CHANGE_PLUS_CODON_INSERTION112
CODON_DELETION56
CODON_DELETION+SPLICE_SITE_REGION1
CODON_INSERTION104
CODON_INSERTION+SPLICE_SITE_REGION1
FRAME_SHIFT378
FRAME_SHIFT+SPLICE_SITE_REGION47
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+START_LOST+SPLICE_SITE_REGION1
FRAME_SHIFT+STOP_GAINED4
FRAME_SHIFT+STOP_LOST5
GENE_FUSION2
GENE_FUSION_REVERESE1
MOTIF_DELETED16
MOTIF[MA0003.1:Ap2alpha]49
MOTIF[MA0014.1:Pax5]8
MOTIF[MA0016.1:RXRA]5
MOTIF[MA0024.1:E2F1]10
MOTIF[MA0035.2:Gata1]2
MOTIF[MA0036.1:Gata2]2
MOTIF[MA0047.2:FOXA2]3
MOTIF[MA0058.1:Max]19
MOTIF[MA0059.1:Cmyc]8
MOTIF[MA0062.1:Gabp]11
MOTIF[MA0062.2:Gabp]46
MOTIF[MA0079.1:SP1]17
MOTIF[MA0079.2:SP1]61
MOTIF[MA0080.1:PU1]3
MOTIF[MA0080.2:PU1]8
MOTIF[MA0093.1:USF1]8
MOTIF[MA0095.1:Yy1]15
MOTIF[MA0099.1:Cfos]2
MOTIF[MA0099.2:AP1]6
MOTIF[MA0114.1:HNF4A]13
MOTIF[MA0138.1:Nrsf]1
MOTIF[MA0138.2:Nrsf]9
MOTIF[MA0139.1:CTCF]104
MOTIF[MA0140.1:Tal1]3
MOTIF[MA0147.1:Cmyc]23
MOTIF[MA0148.1:FOXA1]1
MOTIF[MA0154.1:EBF]7
MOTIF[MA0159.1:RXR]2
MOTIF[MA0162.1:Egr1]88
MOTIF[MA0239.1:Pax5]1
NON_SYNONYMOUS_CODING12103
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION259
NON_SYNONYMOUS_START2
PROTEIN_PROTEIN_INTERACTION_LOCUS2
PROTEIN_STRUCTURAL_INTERACTION_LOCUS265
SPLICE_SITE_REGION139
SPLICE_SITE_REGION+SYNONYMOUS_CODING272
SPLICE_SITE_REGION+SYNONYMOUS_STOP1
START_GAINED615
START_LOST15
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
START_LOST+CODON_DELETION2
START_LOST+SPLICE_SITE_REGION1
STOP_GAINED131
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION4
STOP_LOST27
STOP_LOST+SPLICE_SITE_REGION2
SYNONYMOUS_CODING12235
SYNONYMOUS_STOP15
TRANSCRIPT10
None0

Type Total Variants
2438
MISSENSE12409
NONSENSE135
SILENT12523
None0

Type Total Variants
HIGH893
LOW13566
MODERATE12772
MODIFIER274
None0

Type Total Variants
DRAGENHardINDEL129
DRAGENHardSNP1443
PASS160478

Quality Value
Min30.01
Average1649.50797525455
Max246343.0

Read Depth Value
Min0
Average123.60759642085776
Max6044

Type Total Variants
None0

Chromossome Total Variants
115431
107026
119800
129103
133036
145390
155532
166779
178924
182966
1910805
211165
203971
212393
224080
39013
47065
57207
69233
78294
85814
96645
X2193
Y185