Name: ns4-5
Variants: 104702
Novel Variants: 1231 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 104702 63546 0/1 40950 1/1 206 1/2
Total Gene-associated SNVs 104702 63546 0/1 40950 1/1 206 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION151
CODON_CHANGE_PLUS_CODON_INSERTION86
CODON_DELETION65
CODON_INSERTION83
FRAME_SHIFT279
FRAME_SHIFT+SPLICE_SITE_REGION42
FRAME_SHIFT+START_LOST5
FRAME_SHIFT+STOP_GAINED7
FRAME_SHIFT+STOP_LOST3
GENE_FUSION1
GENE_FUSION_REVERESE2
MOTIF_DELETED1
MOTIF[MA0003.1:Ap2alpha]16
MOTIF[MA0014.1:Pax5]4
MOTIF[MA0016.1:RXRA]2
MOTIF[MA0024.1:E2F1]3
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0047.1:FOXA2]1
MOTIF[MA0058.1:Max]14
MOTIF[MA0059.1:Cmyc]2
MOTIF[MA0062.1:Gabp]5
MOTIF[MA0062.2:Gabp]24
MOTIF[MA0065.1:PPARG]1
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]3
MOTIF[MA0079.2:SP1]17
MOTIF[MA0080.1:PU1]1
MOTIF[MA0080.2:PU1]3
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]1
MOTIF[MA0095.1:Yy1]7
MOTIF[MA0099.2:AP1]2
MOTIF[MA0114.1:HNF4A]9
MOTIF[MA0138.2:Nrsf]4
MOTIF[MA0139.1:CTCF]73
MOTIF[MA0140.1:Tal1]1
MOTIF[MA0147.1:Cmyc]4
MOTIF[MA0154.1:EBF]2
MOTIF[MA0159.1:RXR]3
MOTIF[MA0162.1:Egr1]21
NON_SYNONYMOUS_CODING11658
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION240
PROTEIN_PROTEIN_INTERACTION_LOCUS5
PROTEIN_STRUCTURAL_INTERACTION_LOCUS266
SPLICE_SITE_REGION27
SPLICE_SITE_REGION+CODON_DELETION2
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING261
START_GAINED254
START_LOST14
START_LOST+CODON_CHANGE_PLUS_CODON_DELETION1
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED104
STOP_GAINED+SPLICE_SITE_REGION2
STOP_LOST22
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING12130
SYNONYMOUS_STOP8
TRANSCRIPT1
None0

Type Total Variants
1510
MISSENSE11937
NONSENSE106
SILENT12399
None0

Type Total Variants
HIGH757
LOW12783
MODERATE12286
MODIFIER126
None0

Type Total Variants
MG_INDEL_Filter94
MG_SNP_Filter4035
PASS100573

Quality Value
Min30.29
Average949.914026856819
Max62662.77

Read Depth Value
Min0
Average50.201782200913065
Max2070

Type Total Variants
None0

Chromossome Total Variants
110241
104456
116758
125745
131980
143792
153526
164829
175968
181752
197442
27530
202689
211472
222825
35392
44082
54364
64411
76054
83724
94335
X1235
Y100