Name: gpp10315_20120828021333_nucseek
Variants: 985
Novel Variants: 9 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 985 586 0/1 398 1/1 1 1/2
Total Gene-associated SNVs 985 586 0/1 398 1/1 1 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION5
CODON_CHANGE_PLUS_CODON_INSERTION3
CODON_INSERTION1
FRAME_SHIFT2
MOTIF[MA0024.1:E2F1]1
MOTIF[MA0079.1:SP1]1
MOTIF[MA0095.1:Yy1]1
MOTIF[MA0139.1:CTCF]1
NON_SYNONYMOUS_CODING332
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION9
PROTEIN_STRUCTURAL_INTERACTION_LOCUS38
SPLICE_SITE_REGION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING6
START_GAINED6
START_LOST1
STOP_GAINED1
SYNONYMOUS_CODING408
None0

Type Total Variants
60
MISSENSE342
NONSENSE1
SILENT414
None0

Type Total Variants
HIGH42
LOW423
MODERATE350
MODIFIER2
None0

Type Total Variants
LowQual16
PASS969

Quality Value
Min3.01
Average10519.0843045684
Max32767.01

Read Depth Value
Min1
Average618.9055837563452
Max3812

Type Total Variants
None0

Chromossome Total Variants
1103
1066
1152
1249
1317
1439
1510
1660
1767
1817
1943
260
2017
218
2240
348
436
562
668
747
832
934
X10