Name: lapatrada pol indel
Variants: 21443
Novel Variants: 2182 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 21443 14822 0/1 5973 1/1 648 1/2
Total Gene-associated SNVs 21443 14822 0/1 5973 1/1 648 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION158
CODON_CHANGE_PLUS_CODON_INSERTION104
CODON_DELETION58
CODON_INSERTION84
FRAME_SHIFT286
FRAME_SHIFT+SPLICE_SITE_REGION44
FRAME_SHIFT+START_LOST3
FRAME_SHIFT+STOP_GAINED7
FRAME_SHIFT+STOP_LOST5
GENE_FUSION2
GENE_FUSION_REVERESE2
MOTIF_DELETED7
MOTIF[MA0003.1:Ap2alpha]8
MOTIF[MA0016.1:RXRA]1
MOTIF[MA0058.1:Max]2
MOTIF[MA0062.1:Gabp]3
MOTIF[MA0062.2:Gabp]8
MOTIF[MA0079.1:SP1]1
MOTIF[MA0079.2:SP1]7
MOTIF[MA0080.2:PU1]1
MOTIF[MA0095.1:Yy1]1
MOTIF[MA0099.2:AP1]1
MOTIF[MA0114.1:HNF4A]1
MOTIF[MA0138.2:Nrsf]1
MOTIF[MA0139.1:CTCF]11
MOTIF[MA0154.1:EBF]1
MOTIF[MA0162.1:Egr1]14
PROTEIN_STRUCTURAL_INTERACTION_LOCUS1
SPLICE_SITE_REGION2
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_DELETION2
SPLICE_SITE_REGION+CODON_INSERTION1
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
START_LOST+CODON_DELETION2
TRANSCRIPT2
None0

Type Total Variants
833
None0

Type Total Variants
HIGH353
LOW70
MODERATE408
MODIFIER2
None0

Type Total Variants
PASS21443

Quality Value
Min11.12
Average948.166873571511
Max38506.8

Read Depth Value
Min0
Average49.92435759921653
Max3089

Type Total Variants
None0

Chromossome Total Variants
12075
10895
111079
121270
13444
14812
15743
16892
171223
18391
191384
21533
20523
21337
22487
31196
4937
51003
6927
71248
8740
9817
X468
Y19