Name: gpp10314_20120828021333_nucseek
Variants: 996
Novel Variants: 10 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 996 611 0/1 383 1/1 2 1/2
Total Gene-associated SNVs 996 611 0/1 383 1/1 2 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION4
CODON_CHANGE_PLUS_CODON_INSERTION3
FRAME_SHIFT1
MOTIF[MA0079.1:SP1]1
MOTIF[MA0095.1:Yy1]1
MOTIF[MA0139.1:CTCF]1
NON_SYNONYMOUS_CODING335
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION10
PROTEIN_STRUCTURAL_INTERACTION_LOCUS40
SPLICE_SITE_REGION2
SPLICE_SITE_REGION+SYNONYMOUS_CODING7
START_GAINED5
STOP_GAINED2
SYNONYMOUS_CODING433
None0

Type Total Variants
58
MISSENSE345
NONSENSE2
SILENT440
None0

Type Total Variants
HIGH43
LOW449
MODERATE352
MODIFIER1
None0

Type Total Variants
LowQual14
PASS982

Quality Value
Min4.77
Average10119.8745983934
Max32767.01

Read Depth Value
Min1
Average614.5853413654619
Max4966

Type Total Variants
None0

Chromossome Total Variants
195
1063
1148
1264
1319
1440
1515
1657
1757
1817
1952
266
2024
219
2241
346
444
550
667
747
830
935
X10