Name: na12877-rep1_s1
Variants: 334
Novel Variants: 2 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 334 211 0/1 122 1/1 1 1/2
Total Gene-associated SNVs 334 211 0/1 122 1/1 1 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION1
CODON_CHANGE_PLUS_CODON_INSERTION4
FRAME_SHIFT1
MOTIF[MA0139.1:CTCF]1
NON_SYNONYMOUS_CODING113
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION6
PROTEIN_STRUCTURAL_INTERACTION_LOCUS7
SPLICE_SITE_REGION+SYNONYMOUS_CODING8
SYNONYMOUS_CODING172
None0

Type Total Variants
14
MISSENSE119
SILENT180
None0

Type Total Variants
HIGH8
LOW180
MODERATE124
MODIFIER1
None0

Type Total Variants
LowGQX;LowQD;SB2
LowMQ1
LowQD2
LowQD;SB1
PASS328

Quality Value
Min9.49
Average4742.37748502994
Max22255.04

Read Depth Value
Min44
Average302.92215568862275
Max821

Type Total Variants
None0

Chromossome Total Variants
130
1012
1113
1211
134
143
154
1613
1712
184
1930
291
207
214
228
312
43
513
624
723
83
96
X4