Name: mo-mi-abdi1130 final
Variants: 112427
Novel Variants: 2050 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 112427 66138 0/1 45745 1/1 544 1/2
Total Gene-associated SNVs 112427 66138 0/1 45745 1/1 544 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION138
CODON_CHANGE_PLUS_CODON_INSERTION95
CODON_DELETION49
CODON_INSERTION80
FRAME_SHIFT290
FRAME_SHIFT+SPLICE_SITE_REGION41
FRAME_SHIFT+START_LOST3
FRAME_SHIFT+STOP_GAINED6
FRAME_SHIFT+STOP_LOST6
GENE_FUSION_REVERESE1
MOTIF_DELETED8
MOTIF[MA0003.1:Ap2alpha]19
MOTIF[MA0016.1:RXRA]2
MOTIF[MA0024.1:E2F1]4
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]2
MOTIF[MA0047.1:FOXA2]2
MOTIF[MA0058.1:Max]12
MOTIF[MA0059.1:Cmyc]4
MOTIF[MA0062.1:Gabp]5
MOTIF[MA0062.2:Gabp]19
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]3
MOTIF[MA0079.2:SP1]19
MOTIF[MA0080.1:PU1]3
MOTIF[MA0080.2:PU1]1
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]3
MOTIF[MA0095.1:Yy1]9
MOTIF[MA0099.1:Cfos]1
MOTIF[MA0099.2:AP1]3
MOTIF[MA0114.1:HNF4A]9
MOTIF[MA0138.1:Nrsf]1
MOTIF[MA0138.2:Nrsf]5
MOTIF[MA0139.1:CTCF]82
MOTIF[MA0140.1:Tal1]1
MOTIF[MA0147.1:Cmyc]7
MOTIF[MA0154.1:EBF]4
MOTIF[MA0162.1:Egr1]21
NON_SYNONYMOUS_CODING11416
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION244
NON_SYNONYMOUS_START1
PROTEIN_PROTEIN_INTERACTION_LOCUS4
PROTEIN_STRUCTURAL_INTERACTION_LOCUS234
SPLICE_SITE_REGION32
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_DELETION2
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING252
SPLICE_SITE_REGION+SYNONYMOUS_STOP1
START_GAINED239
START_LOST15
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED116
STOP_GAINED+SPLICE_SITE_REGION1
STOP_LOST29
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING11705
SYNONYMOUS_STOP10
TRANSCRIPT2
None0

Type Total Variants
1477
MISSENSE11708
NONSENSE117
SILENT11968
None0

Type Total Variants
HIGH750
LOW12365
MODERATE12026
MODIFIER129
None0

Type Total Variants
MG_INDEL_Filter290
MG_SNP_Filter5819
PASS106318

Quality Value
Min30.04
Average2092.75307951336
Max86224.77

Read Depth Value
Min0
Average99.21800812971973
Max3315

Type Total Variants
None0

Chromossome Total Variants
111514
105075
117282
126420
132000
144187
154218
165263
176535
181970
197939
27575
202687
211579
222932
35351
44577
54799
64552
76541
83410
94515
X1385
Y121