Name: tsvc_variants_ionxpress_002-4
Variants: 51281
Novel Variants: 2345 (Not in latest DbSNP Build)

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION39
CODON_CHANGE_PLUS_CODON_INSERTION38
CODON_DELETION25
CODON_INSERTION28
FRAME_SHIFT569
FRAME_SHIFT+SPLICE_SITE_REGION29
FRAME_SHIFT+START_LOST3
FRAME_SHIFT+STOP_GAINED5
FRAME_SHIFT+STOP_LOST5
MOTIF[MA0003.1:Ap2alpha]4
MOTIF[MA0016.1:RXRA]1
MOTIF[MA0024.1:E2F1]3
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0058.1:Max]5
MOTIF[MA0059.1:Cmyc]1
MOTIF[MA0062.2:Gabp]8
MOTIF[MA0065.1:PPARG]1
MOTIF[MA0079.1:SP1]1
MOTIF[MA0079.2:SP1]3
MOTIF[MA0080.1:PU1]1
MOTIF[MA0093.1:USF1]1
MOTIF[MA0095.1:Yy1]6
MOTIF[MA0099.1:Cfos]1
MOTIF[MA0114.1:HNF4A]1
MOTIF[MA0139.1:CTCF]21
MOTIF[MA0162.1:Egr1]3
NON_SYNONYMOUS_CODING8958
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION189
PROTEIN_PROTEIN_INTERACTION_LOCUS3
PROTEIN_STRUCTURAL_INTERACTION_LOCUS219
SPLICE_SITE_REGION18
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING218
START_GAINED139
START_LOST7
STOP_GAINED76
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION1
STOP_LOST15
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING9954
SYNONYMOUS_STOP13
TRANSCRIPT1
None0

Type Total Variants
1210
MISSENSE9149
NONSENSE76
SILENT10185
None0

Type Total Variants
HIGH936
LOW10369
MODERATE9279
MODIFIER36
None0

Type Total Variants
PASS51281

Quality Value
Min10.0
Average520.734772917846
Max3855.49

Read Depth Value
Min2
Average110.62804937501218
Max1951

Type Total Variants
None0

Chromossome Total Variants
14991
102238
113436
122573
13983
141542
151671
162204
173144
18887
193635
23714
201192
21762
221012
32901
42090
52551
62838
72321
81816
92059
X716
Y5