Name: 94533-0209701724_ms_onbait
Variants: 135578
Novel Variants: 10576 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 135578 82971 0/1 51418 1/1 1189 1/2
Total Gene-associated SNVs 135578 82971 0/1 51418 1/1 1189 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION129
CODON_CHANGE_PLUS_CODON_INSERTION86
CODON_DELETION96
CODON_INSERTION80
FRAME_SHIFT259
FRAME_SHIFT+SPLICE_SITE_REGION39
FRAME_SHIFT+START_LOST5
FRAME_SHIFT+STOP_GAINED4
FRAME_SHIFT+STOP_LOST6
GENE_FUSION1
MOTIF_DELETED3
MOTIF[MA0003.1:Ap2alpha]23
MOTIF[MA0014.1:Pax5]1
MOTIF[MA0016.1:RXRA]3
MOTIF[MA0024.1:E2F1]2
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]2
MOTIF[MA0047.1:FOXA2]1
MOTIF[MA0058.1:Max]20
MOTIF[MA0059.1:Cmyc]1
MOTIF[MA0062.1:Gabp]2
MOTIF[MA0062.2:Gabp]27
MOTIF[MA0065.1:PPARG]1
MOTIF[MA0079.1:SP1]7
MOTIF[MA0079.2:SP1]14
MOTIF[MA0080.1:PU1]2
MOTIF[MA0080.2:PU1]6
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]6
MOTIF[MA0095.1:Yy1]14
MOTIF[MA0099.1:Cfos]2
MOTIF[MA0099.2:AP1]2
MOTIF[MA0114.1:HNF4A]8
MOTIF[MA0138.1:Nrsf]1
MOTIF[MA0138.2:Nrsf]3
MOTIF[MA0139.1:CTCF]85
MOTIF[MA0147.1:Cmyc]7
MOTIF[MA0148.1:FOXA1]1
MOTIF[MA0154.1:EBF]4
MOTIF[MA0159.1:RXR]1
MOTIF[MA0162.1:Egr1]31
NON_SYNONYMOUS_CODING10571
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION227
NON_SYNONYMOUS_START1
PROTEIN_PROTEIN_INTERACTION_LOCUS4
PROTEIN_STRUCTURAL_INTERACTION_LOCUS246
SPLICE_SITE_REGION43
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION1
SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_INSERTION1
SPLICE_SITE_REGION+CODON_DELETION1
SPLICE_SITE_REGION+CODON_INSERTION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING256
START_GAINED307
START_LOST14
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
START_LOST+CODON_DELETION1
STOP_GAINED84
STOP_GAINED+CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION4
STOP_LOST23
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING11200
SYNONYMOUS_STOP12
TRANSCRIPT4
None0

Type Total Variants
1598
MISSENSE10839
NONSENSE88
SILENT11468
None0

Type Total Variants
HIGH695
LOW11949
MODERATE11193
MODIFIER156
None0

Type Total Variants
PASS135578

Quality Value
Min30.55
Average1158744.95495155
Max20670972.52

Read Depth Value
Min0
Average41.08720441369544
Max543

Type Total Variants
None0

Chromossome Total Variants
112987
106040
117970
127106
132924
144720
154953
165587
177352
182395
198628
29587
203174
212011
223070
37472
45920
56056
68733
76767
84765
95445
X1874
Y42