Name: 073_tsvc_variants
Variants: 36237
Novel Variants: 451 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 36237 21097 0/1 8 0/2 15026 1/1 94 1/2 11 2/2 1 3/3
Total Gene-associated SNVs 36237 21097 0/1 8 0/2 15026 1/1 94 1/2 11 2/2 1 3/3

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION52
CODON_CHANGE_PLUS_CODON_DELETION+SPLICE_SITE_REGION1
CODON_CHANGE_PLUS_CODON_INSERTION34
CODON_DELETION25
CODON_INSERTION33
CODON_INSERTION+SPLICE_SITE_REGION1
FRAME_SHIFT133
FRAME_SHIFT+SPLICE_SITE_REGION20
FRAME_SHIFT+START_LOST2
FRAME_SHIFT+STOP_GAINED1
FRAME_SHIFT+STOP_LOST2
MOTIF[MA0003.1:Ap2alpha]3
MOTIF[MA0024.1:E2F1]2
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0058.1:Max]5
MOTIF[MA0062.1:Gabp]2
MOTIF[MA0062.2:Gabp]4
MOTIF[MA0079.1:SP1]2
MOTIF[MA0079.2:SP1]4
MOTIF[MA0095.1:Yy1]3
MOTIF[MA0114.1:HNF4A]2
MOTIF[MA0139.1:CTCF]16
MOTIF[MA0147.1:Cmyc]2
MOTIF[MA0154.1:EBF]1
MOTIF[MA0162.1:Egr1]3
NON_SYNONYMOUS_CODING8121
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION190
PROTEIN_PROTEIN_INTERACTION_LOCUS4
PROTEIN_STRUCTURAL_INTERACTION_LOCUS224
SPLICE_SITE_REGION17
SPLICE_SITE_REGION+SYNONYMOUS_CODING219
START_GAINED112
START_LOST6
STOP_GAINED76
STOP_LOST17
STOP_LOST+SPLICE_SITE_REGION3
SYNONYMOUS_CODING9308
SYNONYMOUS_STOP9
TRANSCRIPT1
None0

Type Total Variants
712
MISSENSE8337
NONSENSE76
SILENT9536
None0

Type Total Variants
HIGH488
LOW9686
MODERATE8457
MODIFIER30
None0

Type Total Variants
PASS36237

Quality Value
Min10.0
Average519.153507467508
Max3853.88

Read Depth Value
Min6
Average104.15081270524603
Max1624

Type Total Variants
None0

Chromossome Total Variants
13695
101530
112490
121884
13706
141125
151184
161565
172236
18589
192658
22559
20855
21477
22739
31894
41428
51545
62034
71635
81297
91483
X629