Name: 33011510240923_annotated
Variants: 53334
Novel Variants: 277 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 53334 35456 0/1 17818 1/1 60 1/2
Total Gene-associated SNVs 53334 35456 0/1 17818 1/1 60 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION81
CODON_CHANGE_PLUS_CODON_INSERTION56
CODON_CHANGE_PLUS_CODON_INSERTION+SPLICE_SITE_REGION1
CODON_DELETION34
CODON_DELETION+SPLICE_SITE_REGION1
CODON_INSERTION55
CODON_INSERTION+SPLICE_SITE_REGION1
FRAME_SHIFT231
FRAME_SHIFT+SPLICE_SITE_REGION38
FRAME_SHIFT+START_LOST2
FRAME_SHIFT+STOP_GAINED7
FRAME_SHIFT+STOP_LOST2
MOTIF_DELETED1
MOTIF[MA0003.1:Ap2alpha]6
MOTIF[MA0014.1:Pax5]4
MOTIF[MA0016.1:RXRA]1
MOTIF[MA0024.1:E2F1]2
MOTIF[MA0058.1:Max]4
MOTIF[MA0062.1:Gabp]1
MOTIF[MA0062.2:Gabp]13
MOTIF[MA0079.1:SP1]1
MOTIF[MA0079.2:SP1]8
MOTIF[MA0080.1:PU1]1
MOTIF[MA0080.2:PU1]1
MOTIF[MA0093.1:USF1]2
MOTIF[MA0095.1:Yy1]9
MOTIF[MA0099.1:Cfos]1
MOTIF[MA0138.2:Nrsf]1
MOTIF[MA0139.1:CTCF]19
MOTIF[MA0147.1:Cmyc]3
MOTIF[MA0148.1:FOXA1]2
MOTIF[MA0154.1:EBF]1
MOTIF[MA0162.1:Egr1]3
NON_SYNONYMOUS_CODING10956
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION199
PROTEIN_PROTEIN_INTERACTION_LOCUS4
PROTEIN_STRUCTURAL_INTERACTION_LOCUS273
SPLICE_SITE_REGION20
SPLICE_SITE_REGION+SYNONYMOUS_CODING248
START_GAINED107
START_LOST16
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED98
STOP_GAINED+SPLICE_SITE_REGION2
STOP_LOST22
STOP_LOST+SPLICE_SITE_REGION1
SYNONYMOUS_CODING12115
SYNONYMOUS_STOP9
None0

Type Total Variants
998
MISSENSE11194
NONSENSE100
SILENT12372
None0

Type Total Variants
HIGH697
LOW12545
MODERATE11384
MODIFIER38
None0

Type Total Variants
Indel_QC65
PASS52045
SNP_QC1224

Quality Value
Min30.73
Average2076.06342539398
Max33949.77

Read Depth Value
Min0
Average119.08954888063899
Max1518

Type Total Variants
None0

Chromossome Total Variants
15130
102035
113635
122751
13917
141980
151792
162610
172950
18765
194037
23695
201346
21845
221451
32831
42030
52394
62346
73069
81931
92184
X590
Y20