Name: dels
Variants: 4552
Novel Variants: 4552 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 4552 635 0|1 1016 0/1 1653 1|0 1248 1|1
Total Gene-associated SNVs 4552 635 0|1 1016 0/1 1653 1|0 1248 1|1

Type Total Variants
44
CODON_CHANGE_PLUS_CODON_DELETION3
EXON_DELETED27
EXON_DELETED+SPLICE_SITE_REGION4
FEATURE_FUSION42
FRAME_SHIFT8
FRAME_SHIFT+START_LOST1
FRAME_SHIFT+START_LOST+SPLICE_SITE_REGION5
FRAME_SHIFT+STOP_LOST4
FRAME_SHIFT+STOP_LOST+SPLICE_SITE_REGION5
GENE_DELETED5
GENE_FUSION29
GENE_FUSION+FRAME_SHIFT12
GENE_FUSION_REVERESE2
MOTIF_DELETED80
MOTIF[MA0079.2:SP1]1
MOTIF[MA0095.1:Yy1]1
MOTIF[MA0114.1:HNF4A]1
MOTIF[MA0139.1:CTCF]9
MOTIF[MA0148.1:FOXA1]1
PROTEIN_STRUCTURAL_INTERACTION_LOCUS3
SPLICE_SITE_REGION20
START_LOST+CODON_DELETION+SPLICE_SITE_REGION3
STOP_LOST+CODON_DELETION5
TRANSCRIPT5
TRANSCRIPT_DELETED2
None0

Type Total Variants
322
None0

Type Total Variants
HIGH115
LOW155
MODERATE3
MODIFIER49
None0

Type Total Variants
PASS4514
SEG_DUP38

Quality Value
Min0.0
Average30.7291300527241
Max225.0

Read Depth Value
Min0
Average0.0
Max0

Type Total Variants
None0

Chromossome Total Variants
1329
10193
11216
12203
13152
14128
15119
16124
17157
18119
19143
2370
20111
2162
2281
3268
4306
5269
6291
7289
8237
9209
X176