Name: mm180104ea
Variants: 168846
Novel Variants: 4138 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 168846 108988 0/1 59145 1/1 713 1/2
Total Gene-associated SNVs 168846 108988 0/1 59145 1/1 713 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION132
CODON_CHANGE_PLUS_CODON_DELETION+SPLICE_SITE_REGION1
CODON_CHANGE_PLUS_CODON_INSERTION87
CODON_DELETION52
CODON_DELETION+SPLICE_SITE_REGION1
CODON_INSERTION77
CODON_INSERTION+SPLICE_SITE_REGION1
FRAME_SHIFT183
FRAME_SHIFT+SPLICE_SITE_REGION43
FRAME_SHIFT+START_LOST6
FRAME_SHIFT+STOP_GAINED3
FRAME_SHIFT+STOP_LOST4
GENE_FUSION1
MOTIF[MA0003.1:Ap2alpha]34
MOTIF[MA0014.1:Pax5]5
MOTIF[MA0016.1:RXRA]6
MOTIF[MA0024.1:E2F1]8
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0047.2:FOXA2]1
MOTIF[MA0058.1:Max]28
MOTIF[MA0059.1:Cmyc]5
MOTIF[MA0062.1:Gabp]14
MOTIF[MA0062.2:Gabp]41
MOTIF[MA0065.1:PPARG]2
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0079.1:SP1]6
MOTIF[MA0079.2:SP1]31
MOTIF[MA0080.1:PU1]1
MOTIF[MA0080.2:PU1]6
MOTIF[MA0083.1:Srf]2
MOTIF[MA0093.1:USF1]5
MOTIF[MA0095.1:Yy1]14
MOTIF[MA0099.2:AP1]3
MOTIF[MA0114.1:HNF4A]10
MOTIF[MA0138.1:Nrsf]1
MOTIF[MA0138.2:Nrsf]6
MOTIF[MA0139.1:CTCF]122
MOTIF[MA0140.1:Tal1]2
MOTIF[MA0147.1:Cmyc]14
MOTIF[MA0154.1:EBF]5
MOTIF[MA0159.1:RXR]1
MOTIF[MA0162.1:Egr1]48
NON_SYNONYMOUS_CODING13761
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION264
NON_SYNONYMOUS_START1
PROTEIN_PROTEIN_INTERACTION_LOCUS3
PROTEIN_STRUCTURAL_INTERACTION_LOCUS288
SPLICE_SITE_REGION37
SPLICE_SITE_REGION+SYNONYMOUS_CODING290
START_GAINED362
START_LOST17
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED159
STOP_GAINED+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION2
STOP_LOST28
STOP_LOST+SPLICE_SITE_REGION5
SYNONYMOUS_CODING13313
SYNONYMOUS_STOP12
TRANSCRIPT2
None0

Type Total Variants
1709
MISSENSE14076
NONSENSE161
SILENT13615
None0

Type Total Variants
HIGH744
LOW14210
MODERATE14376
MODIFIER231
None0

Type Total Variants
.163047
LowQual5799

Quality Value
Min10.17
Average1287.1233188252
Max65449.29

Read Depth Value
Min1
Average91.73305260414816
Max8256

Type Total Variants
None0

Chromossome Total Variants
115839
107717
119223
129537
133137
146208
156312
167714
178864
182789
1911521
211607
204343
212492
224581
39039
46899
56936
610289
79044
85429
97151
X1893
Y282