Name: cds 3422_16
Variants: 22112
Novel Variants: 152 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 22112 238 0|1 14007 0/1 8 0/2 2 1 8 1|0 7834 1/1 15 1/2
Total Gene-associated SNVs 22112 238 0|1 14007 0/1 8 0/2 2 1 8 1|0 7834 1/1 15 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION116
CODON_CHANGE_PLUS_CODON_DELETION+SPLICE_SITE_REGION1
CODON_CHANGE_PLUS_CODON_INSERTION69
CODON_DELETION52
CODON_DELETION+SPLICE_SITE_REGION1
CODON_INSERTION62
FRAME_SHIFT137
FRAME_SHIFT+SPLICE_SITE_REGION29
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED5
MOTIF[MA0095.1:Yy1]2
MOTIF[MA0139.1:CTCF]1
MOTIF[MA0162.1:Egr1]1
NON_SYNONYMOUS_CODING9390
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION192
NON_SYNONYMOUS_START2
PROTEIN_PROTEIN_INTERACTION_LOCUS5
PROTEIN_STRUCTURAL_INTERACTION_LOCUS245
SPLICE_SITE_REGION2
SPLICE_SITE_REGION+SYNONYMOUS_CODING241
START_GAINED3
START_LOST11
START_LOST+CODON_CHANGE_PLUS_CODON_DELETION1
STOP_GAINED55
STOP_GAINED+CODON_CHANGE_PLUS_CODON_INSERTION2
STOP_LOST13
STOP_LOST+SPLICE_SITE_REGION1
SYNONYMOUS_CODING10565
SYNONYMOUS_STOP1
None0

Type Total Variants
738
MISSENSE9609
NONSENSE55
SILENT10807
None0

Type Total Variants
HIGH508
LOW10817
MODERATE9883
MODIFIER1
None0

Type Total Variants
PASS22112

Quality Value
Min16.0
Average1271.59361432706
Max3070.0

Read Depth Value
Min0
Average56.883728292329955
Max684

Type Total Variants
None0

Chromossome Total Variants
12263
10898
111615
121137
13334
14717
15712
16909
171303
18378
191659
21485
20568
21317
22528
31098
4908
51058
6979
71123
8739
9905
X478
Y1