Name: cds 3405_16
Variants: 21850
Novel Variants: 152 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 21850 226 0|1 13177 0/1 7 0/2 4 1 11 1|0 8409 1/1 15 1/2 1 2/3
Total Gene-associated SNVs 21850 226 0|1 13177 0/1 7 0/2 4 1 11 1|0 8409 1/1 15 1/2 1 2/3

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION94
CODON_CHANGE_PLUS_CODON_DELETION+SPLICE_SITE_REGION1
CODON_CHANGE_PLUS_CODON_INSERTION63
CODON_DELETION50
CODON_INSERTION62
FRAME_SHIFT134
FRAME_SHIFT+SPLICE_SITE_REGION27
FRAME_SHIFT+START_LOST4
FRAME_SHIFT+STOP_GAINED5
MOTIF[MA0079.1:SP1]1
MOTIF[MA0095.1:Yy1]2
MOTIF[MA0162.1:Egr1]1
NON_SYNONYMOUS_CODING9189
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION201
NON_SYNONYMOUS_START1
PROTEIN_PROTEIN_INTERACTION_LOCUS4
PROTEIN_STRUCTURAL_INTERACTION_LOCUS249
SPLICE_SITE_REGION1
SPLICE_SITE_REGION+SYNONYMOUS_CODING229
START_GAINED5
START_LOST11
START_LOST+CODON_CHANGE_PLUS_CODON_DELETION1
STOP_GAINED60
STOP_GAINED+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION1
STOP_LOST14
STOP_LOST+SPLICE_SITE_REGION1
SYNONYMOUS_CODING10579
SYNONYMOUS_STOP1
None0

Type Total Variants
705
MISSENSE9417
NONSENSE61
SILENT10809
None0

Type Total Variants
HIGH512
LOW10820
MODERATE9660
None0

Type Total Variants
PASS21850

Quality Value
Min15.0
Average1291.28086956522
Max3070.0

Read Depth Value
Min0
Average60.98855835240275
Max629

Type Total Variants
None0

Chromossome Total Variants
12154
10885
111627
121038
13371
14653
15729
16906
171219
18362
191802
21528
20596
21259
22522
31045
4880
51050
6974
71141
8740
9896
X470
Y3