Name: fam5 cleaned 3405_16
Variants: 199346
Novel Variants: 3409 (Not in latest DbSNP Build)

Type Total Variants
39
CODON_CHANGE_PLUS_CODON_DELETION97
CODON_CHANGE_PLUS_CODON_DELETION+SPLICE_SITE_REGION1
CODON_CHANGE_PLUS_CODON_INSERTION70
CODON_DELETION54
CODON_DELETION+SPLICE_SITE_REGION1
CODON_INSERTION63
CODON_INSERTION+SPLICE_SITE_REGION1
FRAME_SHIFT183
FRAME_SHIFT+SPLICE_SITE_REGION34
FRAME_SHIFT+START_LOST6
FRAME_SHIFT+STOP_GAINED6
FRAME_SHIFT+STOP_LOST2
GENE_FUSION_REVERESE1
MOTIF_DELETED1
MOTIF[MA0003.1:Ap2alpha]9
MOTIF[MA0014.1:Pax5]4
MOTIF[MA0016.1:RXRA]3
MOTIF[MA0024.1:E2F1]1
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0047.2:FOXA2]2
MOTIF[MA0058.1:Max]14
MOTIF[MA0059.1:Cmyc]3
MOTIF[MA0062.1:Gabp]9
MOTIF[MA0062.2:Gabp]22
MOTIF[MA0065.1:PPARG]2
MOTIF[MA0079.1:SP1]6
MOTIF[MA0079.2:SP1]11
MOTIF[MA0080.1:PU1]2
MOTIF[MA0080.2:PU1]2
MOTIF[MA0083.1:Srf]1
MOTIF[MA0093.1:USF1]9
MOTIF[MA0095.1:Yy1]7
MOTIF[MA0099.1:Cfos]1
MOTIF[MA0099.2:AP1]1
MOTIF[MA0105.1:NFKB]1
MOTIF[MA0114.1:HNF4A]10
MOTIF[MA0138.1:Nrsf]1
MOTIF[MA0138.2:Nrsf]7
MOTIF[MA0139.1:CTCF]110
MOTIF[MA0140.1:Tal1]1
MOTIF[MA0147.1:Cmyc]7
MOTIF[MA0148.1:FOXA1]3
MOTIF[MA0154.1:EBF]5
MOTIF[MA0159.1:RXR]1
MOTIF[MA0162.1:Egr1]19
NON_SYNONYMOUS_CODING9876
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION226
NON_SYNONYMOUS_START1
PROTEIN_PROTEIN_INTERACTION_LOCUS4
PROTEIN_STRUCTURAL_INTERACTION_LOCUS249
SPLICE_SITE_REGION48
SPLICE_SITE_REGION+SYNONYMOUS_CODING241
START_GAINED235
START_LOST15
START_LOST+CODON_CHANGE_PLUS_CODON_DELETION1
STOP_GAINED79
STOP_GAINED+CODON_CHANGE_PLUS_CODON_INSERTION1
STOP_GAINED+SPLICE_SITE_REGION1
STOP_LOST27
STOP_LOST+SPLICE_SITE_REGION2
SYNONYMOUS_CODING10974
SYNONYMOUS_STOP11
TRANSCRIPT1
None0

Type Total Variants
1373
MISSENSE10147
NONSENSE80
SILENT11226
None0

Type Total Variants
HIGH611
LOW11617
MODERATE10389
MODIFIER209
None0

Type Total Variants
PASS199346

Quality Value
Min0.0
Average643.460174771503
Max3070.0

Read Depth Value
Min0
Average25.10230453583217
Max2262

Type Total Variants
None0

Chromossome Total Variants
116782
109323
1110943
129909
134686
146553
157790
167544
179400
184161
1910986
215524
205315
213585
224762
310491
410181
59656
69842
710369
87824
98438
M39
X4943
Y300