Name: fam5 cleaned 3403_16
Variants: 196801
Novel Variants: 3382 (Not in latest DbSNP Build)

Type Total Variants
39
CODON_CHANGE_PLUS_CODON_DELETION109
CODON_CHANGE_PLUS_CODON_DELETION+SPLICE_SITE_REGION1
CODON_CHANGE_PLUS_CODON_INSERTION76
CODON_DELETION61
CODON_DELETION+SPLICE_SITE_REGION1
CODON_INSERTION72
CODON_INSERTION+SPLICE_SITE_REGION1
FRAME_SHIFT200
FRAME_SHIFT+SPLICE_SITE_REGION32
FRAME_SHIFT+START_LOST5
FRAME_SHIFT+STOP_GAINED4
FRAME_SHIFT+STOP_LOST1
GENE_FUSION1
GENE_FUSION_REVERESE1
MOTIF[MA0003.1:Ap2alpha]14
MOTIF[MA0014.1:Pax5]3
MOTIF[MA0016.1:RXRA]2
MOTIF[MA0024.1:E2F1]3
MOTIF[MA0035.2:Gata1]1
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0047.1:FOXA2]1
MOTIF[MA0047.2:FOXA2]2
MOTIF[MA0058.1:Max]14
MOTIF[MA0059.1:Cmyc]3
MOTIF[MA0062.1:Gabp]7
MOTIF[MA0062.2:Gabp]17
MOTIF[MA0065.1:PPARG]2
MOTIF[MA0074.1:RXRA]1
MOTIF[MA0079.1:SP1]4
MOTIF[MA0079.2:SP1]12
MOTIF[MA0080.2:PU1]2
MOTIF[MA0093.1:USF1]10
MOTIF[MA0095.1:Yy1]5
MOTIF[MA0099.1:Cfos]1
MOTIF[MA0099.2:AP1]3
MOTIF[MA0105.1:NFKB]1
MOTIF[MA0114.1:HNF4A]11
MOTIF[MA0115.1:RNR1H2]1
MOTIF[MA0138.2:Nrsf]7
MOTIF[MA0139.1:CTCF]127
MOTIF[MA0147.1:Cmyc]4
MOTIF[MA0148.1:FOXA1]2
MOTIF[MA0154.1:EBF]8
MOTIF[MA0159.1:RXR]2
MOTIF[MA0162.1:Egr1]13
NON_SYNONYMOUS_CODING10266
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION229
PROTEIN_PROTEIN_INTERACTION_LOCUS5
PROTEIN_STRUCTURAL_INTERACTION_LOCUS260
SPLICE_SITE_REGION43
SPLICE_SITE_REGION+SYNONYMOUS_CODING253
START_GAINED250
START_LOST14
STOP_GAINED84
STOP_GAINED+CODON_CHANGE_PLUS_CODON_INSERTION2
STOP_GAINED+SPLICE_SITE_REGION3
STOP_LOST23
STOP_LOST+SPLICE_SITE_REGION2
SYNONYMOUS_CODING11214
SYNONYMOUS_STOP8
TRANSCRIPT1
None0

Type Total Variants
1449
MISSENSE10534
NONSENSE87
SILENT11475
None0

Type Total Variants
HIGH637
LOW11866
MODERATE10816
MODIFIER226
None0

Type Total Variants
PASS196801

Quality Value
Min0.0
Average633.989507167138
Max3070.0

Read Depth Value
Min0
Average24.58565251192829
Max1946

Type Total Variants
None0

Chromossome Total Variants
117250
108961
1110486
1210410
134854
147373
157523
167375
179691
184185
1910806
214995
204816
213588
224629
310657
49463
59368
69816
710445
87315
98054
M39
X4360
Y342