Name: dossier4-di450-2-b00h4r3_hg19_snp annot
Variants: 2876
Novel Variants: 26 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 2876 1621 0/1 1251 1/1 4 1/2
Total Gene-associated SNVs 2876 1621 0/1 1251 1/1 4 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION1
CODON_CHANGE_PLUS_CODON_INSERTION2
CODON_DELETION1
CODON_INSERTION1
FRAME_SHIFT1
FRAME_SHIFT+SPLICE_SITE_REGION1
MOTIF[MA0062.2:Gabp]1
MOTIF[MA0065.2:PPARG]1
MOTIF[MA0139.1:CTCF]2
MOTIF[MA0162.1:Egr1]1
NON_SYNONYMOUS_CODING162
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION6
PROTEIN_PROTEIN_INTERACTION_LOCUS1
PROTEIN_STRUCTURAL_INTERACTION_LOCUS7
SPLICE_SITE_REGION2
SPLICE_SITE_REGION+SYNONYMOUS_CODING8
START_GAINED7
STOP_GAINED1
SYNONYMOUS_CODING308
None0

Type Total Variants
29
MISSENSE168
NONSENSE1
SILENT316
None0

Type Total Variants
HIGH11
LOW325
MODERATE173
MODIFIER5
None0

Type Total Variants
.2806
LowQual70

Quality Value
Min10.9
Average741.92254172463
Max5601.73

Read Depth Value
Min1
Average34.43011126564673
Max96

Type Total Variants
None0

Chromossome Total Variants
1197
1081
11132
12136
1345
1451
15167
16119
1770
1858
19102
2218
2064
2142
22103
3176
474
5139
6164
7148
8134
9251
X205