Name: muestra1_s1
Variants: 8942
Novel Variants: 245 (Not in latest DbSNP Build)
| Type | Total Variants |
|---|---|
| CODON_CHANGE_PLUS_CODON_DELETION | 24 |
| CODON_CHANGE_PLUS_CODON_INSERTION | 18 |
| CODON_DELETION | 8 |
| CODON_INSERTION | 11 |
| FRAME_SHIFT | 19 |
| FRAME_SHIFT+SPLICE_SITE_REGION | 10 |
| FRAME_SHIFT+START_LOST | 1 |
| FRAME_SHIFT+STOP_LOST | 1 |
| MOTIF[MA0024.1:E2F1] | 1 |
| MOTIF[MA0062.1:Gabp] | 1 |
| MOTIF[MA0079.2:SP1] | 1 |
| MOTIF[MA0139.1:CTCF] | 2 |
| NON_SYNONYMOUS_CODING | 2987 |
| NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION | 91 |
| PROTEIN_PROTEIN_INTERACTION_LOCUS | 1 |
| PROTEIN_STRUCTURAL_INTERACTION_LOCUS | 70 |
| SPLICE_SITE_REGION | 4 |
| SPLICE_SITE_REGION+SYNONYMOUS_CODING | 78 |
| START_GAINED | 11 |
| START_LOST | 4 |
| STOP_GAINED | 25 |
| STOP_GAINED+SPLICE_SITE_REGION | 1 |
| STOP_LOST | 7 |
| SYNONYMOUS_CODING | 3680 |
| SYNONYMOUS_STOP | 2 |
| None | 0 |
| Type | Total Variants |
|---|---|
| None | 0 |
| Type | Total Variants |
|---|---|
| LowGQ;LowGQX | 129 |
| LowGQ;LowGQX;LowMQ | 1 |
| LowGQ;LowGQX;LowMQ;LowQD;SB | 12 |
| LowGQ;LowGQX;LowMQ;SB | 4 |
| LowGQ;LowGQX;SB | 50 |
| LowGQX | 13 |
| LowGQX;LowMQ;LowQD;SB | 7 |
| LowGQX;LowQD | 69 |
| LowGQX;LowQD;SB | 142 |
| LowGQX;SB | 13 |
| LowMQ | 3 |
| LowMQ;LowQD | 4 |
| LowMQ;LowQD;SB | 12 |
| LowMQ;SB | 5 |
| LowQD | 117 |
| LowQD;SB | 111 |
| PASS | 8052 |
| SB | 198 |
| Quality | Value |
|---|---|
| Min | 3.08 |
| Average | 1563.7333583091 |
| Max | 21261.01 |
| Read Depth | Value |
|---|---|
| Min | 1 |
| Average | 81.93659136658465 |
| Max | 331 |