Name: muestra2_s1
Variants: 9176
Novel Variants: 254 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 9176 5538 0/1 1 1 3586 1/1 51 1/2
Total Gene-associated SNVs 9176 5538 0/1 1 1 3586 1/1 51 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION29
CODON_CHANGE_PLUS_CODON_INSERTION18
CODON_DELETION10
CODON_INSERTION10
FRAME_SHIFT19
FRAME_SHIFT+SPLICE_SITE_REGION9
FRAME_SHIFT+START_LOST1
MOTIF[MA0003.1:Ap2alpha]1
MOTIF[MA0024.1:E2F1]1
MOTIF[MA0079.2:SP1]1
MOTIF[MA0139.1:CTCF]1
NON_SYNONYMOUS_CODING3133
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION76
NON_SYNONYMOUS_START1
PROTEIN_PROTEIN_INTERACTION_LOCUS1
PROTEIN_STRUCTURAL_INTERACTION_LOCUS77
SPLICE_SITE_REGION4
SPLICE_SITE_REGION+SYNONYMOUS_CODING85
START_GAINED4
START_LOST2
STOP_GAINED38
STOP_LOST8
SYNONYMOUS_CODING3709
SYNONYMOUS_STOP1
None0

Type Total Variants
186
MISSENSE3220
NONSENSE38
SILENT3795
None0

Type Total Variants
HIGH155
LOW3806
MODERATE3276
MODIFIER2
None0

Type Total Variants
LowGQ1
LowGQ;LowGQX130
LowGQ;LowGQX;LowMQ4
LowGQ;LowGQX;LowMQ;LowQD;SB12
LowGQ;LowGQX;LowMQ;SB4
LowGQ;LowGQX;LowQD;SB1
LowGQ;LowGQX;SB56
LowGQX13
LowGQX;LowMQ;LowQD;SB10
LowGQX;LowQD75
LowGQX;LowQD;SB138
LowGQX;SB9
LowMQ10
LowMQ;LowQD7
LowMQ;LowQD;SB25
LowMQ;SB13
LowQD102
LowQD;SB117
PASS8251
SB198

Quality Value
Min3.03
Average1687.30555361814
Max23957.36

Read Depth Value
Min1
Average88.86192240627724
Max445

Type Total Variants
None0
2|21
24

Chromossome Total Variants
1845
10355
11571
12469
13162
14197
15332
16482
17417
18148
19559
2697
20172
21119
22227
3469
4384
5386
6953
7385
8307
9365
X170
Y5