Name: muestra3_s1
Variants: 9053
Novel Variants: 213 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 9053 5256 0/1 3759 1/1 38 1/2
Total Gene-associated SNVs 9053 5256 0/1 3759 1/1 38 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION24
CODON_CHANGE_PLUS_CODON_INSERTION14
CODON_DELETION10
CODON_INSERTION12
FRAME_SHIFT26
FRAME_SHIFT+SPLICE_SITE_REGION10
FRAME_SHIFT+START_LOST1
FRAME_SHIFT+STOP_LOST1
MOTIF[MA0024.1:E2F1]1
MOTIF[MA0139.1:CTCF]3
NON_SYNONYMOUS_CODING2981
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION81
PROTEIN_PROTEIN_INTERACTION_LOCUS1
PROTEIN_STRUCTURAL_INTERACTION_LOCUS76
SPLICE_SITE_REGION4
SPLICE_SITE_REGION+SYNONYMOUS_CODING73
START_GAINED9
START_LOST2
STOP_GAINED30
STOP_GAINED+SPLICE_SITE_REGION1
STOP_LOST9
SYNONYMOUS_CODING3715
SYNONYMOUS_STOP1
None0

Type Total Variants
192
MISSENSE3073
NONSENSE31
SILENT3789
None0

Type Total Variants
HIGH157
LOW3805
MODERATE3122
MODIFIER1
None0

Type Total Variants
LowGQ;LowGQX162
LowGQ;LowGQX;LowMQ6
LowGQ;LowGQX;LowMQ;LowQD;SB7
LowGQ;LowGQX;LowMQ;SB4
LowGQ;LowGQX;LowQD;SB1
LowGQ;LowGQX;SB66
LowGQ;SB1
LowGQX12
LowGQX;LowMQ;LowQD2
LowGQX;LowMQ;LowQD;SB11
LowGQX;LowQD58
LowGQX;LowQD;SB115
LowGQX;SB8
LowMQ6
LowMQ;LowQD5
LowMQ;LowQD;SB18
LowMQ;SB9
LowQD85
LowQD;SB80
PASS8204
SB193

Quality Value
Min3.01
Average1419.2471523252
Max20649.09

Read Depth Value
Min1
Average74.06229979012483
Max316

Type Total Variants
None0
41
2|21
23

Chromossome Total Variants
1837
10355
11543
12484
13186
14222
15287
16454
17449
18150
19485
2618
20194
21125
22241
3440
4400
5427
6885
7370
8356
9356
X184
Y5