Name: ldp546
Variants: 3063
Novel Variants: 11 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 3063 1590 0/1 1473 1/1
Total Gene-associated SNVs 3063 1590 0/1 1473 1/1

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION1
CODON_CHANGE_PLUS_CODON_INSERTION1
CODON_DELETION1
CODON_INSERTION2
FRAME_SHIFT4
MOTIF[MA0003.1:Ap2alpha]1
MOTIF[MA0062.2:Gabp]1
MOTIF[MA0138.2:Nrsf]1
MOTIF[MA0139.1:CTCF]1
MOTIF[MA0147.1:Cmyc]1
NON_SYNONYMOUS_CODING120
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION1
PROTEIN_PROTEIN_INTERACTION_LOCUS1
PROTEIN_STRUCTURAL_INTERACTION_LOCUS2
SPLICE_SITE_REGION+SYNONYMOUS_CODING1
START_GAINED3
STOP_GAINED1
SYNONYMOUS_CODING151
None0

Type Total Variants
20
MISSENSE121
NONSENSE1
SILENT152
None0

Type Total Variants
HIGH8
LOW158
MODERATE126
MODIFIER2
None0

Type Total Variants
.3063

Quality Value
Min30.23
Average281.740626836437
Max2290.0

Read Depth Value
Min2
Average21.714005876591578
Max113

Type Total Variants
None0

Chromossome Total Variants
1328
10143
11101
12204
1394
1470
1584
1653
1782
1835
19137
2229
2095
2134
2267
3149
4222
5192
6180
7212
8109
9143
X100