Name: anotado
Variants: 31911
Novel Variants: 31547 (Not in latest DbSNP Build)
| Type | Total Variants |
|---|---|
| 124 | |
| CODON_CHANGE_PLUS_CODON_DELETION | 24 |
| CODON_CHANGE_PLUS_CODON_INSERTION | 23 |
| CODON_DELETION | 26 |
| CODON_INSERTION | 31 |
| FRAME_SHIFT | 510 |
| FRAME_SHIFT+SPLICE_SITE_REGION | 16 |
| FRAME_SHIFT+STOP_GAINED | 17 |
| FRAME_SHIFT+STOP_LOST | 1 |
| MOTIF_DELETED | 3 |
| MOTIF[MA0016.1:RXRA] | 1 |
| MOTIF[MA0059.1:Cmyc] | 2 |
| MOTIF[MA0062.1:Gabp] | 3 |
| MOTIF[MA0062.2:Gabp] | 1 |
| MOTIF[MA0065.1:PPARG] | 1 |
| MOTIF[MA0079.1:SP1] | 2 |
| MOTIF[MA0079.2:SP1] | 2 |
| MOTIF[MA0080.1:PU1] | 1 |
| MOTIF[MA0083.1:Srf] | 1 |
| MOTIF[MA0093.1:USF1] | 1 |
| MOTIF[MA0095.1:Yy1] | 1 |
| MOTIF[MA0114.1:HNF4A] | 1 |
| MOTIF[MA0138.2:Nrsf] | 4 |
| MOTIF[MA0139.1:CTCF] | 21 |
| MOTIF[MA0147.1:Cmyc] | 3 |
| MOTIF[MA0148.1:FOXA1] | 2 |
| MOTIF[MA0162.1:Egr1] | 3 |
| PROTEIN_STRUCTURAL_INTERACTION_LOCUS | 5 |
| SPLICE_SITE_REGION | 5 |
| SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION | 2 |
| SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_INSERTION | 1 |
| STOP_GAINED+CODON_CHANGE_PLUS_CODON_INSERTION | 3 |
| STOP_GAINED+CODON_INSERTION | 1 |
| None | 0 |
| Type | Total Variants |
|---|---|
| . | 31911 |
| Quality | Value |
|---|---|
| Min | 30.02 |
| Average | 269.470344081988 |
| Max | 14418.03 |
| Read Depth | Value |
|---|---|
| Min | 1 |
| Average | 13.782300774027764 |
| Max | 556 |
| Type | Total Variants |
|---|---|
| None | 0 |