Mendel,MD | Dashboard

Name: mk267 final
Variants: 98730
Novel Variants: 1138 (Not in latest DbSNP Build)

Type	Total Variants
Total SNVs	98730	58543 0/1	40010 1/1	177 1/2
Total Gene-associated SNVs	98730	58543 0/1	40010 1/1	177 1/2

Type	Total Variants
CODON_CHANGE_PLUS_CODON_DELETION	148
CODON_CHANGE_PLUS_CODON_INSERTION	87
CODON_DELETION	49
CODON_INSERTION	80
FRAME_SHIFT	255
FRAME_SHIFT+SPLICE_SITE_REGION	42
FRAME_SHIFT+START_LOST	4
FRAME_SHIFT+STOP_GAINED	3
FRAME_SHIFT+STOP_LOST	3
GENE_FUSION	1
GENE_FUSION_REVERESE	1
MOTIF_DELETED	4
MOTIF[MA0003.1:Ap2alpha]	16
MOTIF[MA0014.1:Pax5]	4
MOTIF[MA0016.1:RXRA]	1
MOTIF[MA0024.1:E2F1]	1
MOTIF[MA0035.2:Gata1]	1
MOTIF[MA0036.1:Gata2]	2
MOTIF[MA0047.2:FOXA2]	1
MOTIF[MA0058.1:Max]	10
MOTIF[MA0059.1:Cmyc]	2
MOTIF[MA0062.1:Gabp]	2
MOTIF[MA0062.2:Gabp]	26
MOTIF[MA0065.2:PPARG]	1
MOTIF[MA0079.1:SP1]	2
MOTIF[MA0079.2:SP1]	18
MOTIF[MA0080.1:PU1]	1
MOTIF[MA0080.2:PU1]	2
MOTIF[MA0083.1:Srf]	1
MOTIF[MA0093.1:USF1]	4
MOTIF[MA0095.1:Yy1]	8
MOTIF[MA0099.1:Cfos]	1
MOTIF[MA0099.2:AP1]	2
MOTIF[MA0114.1:HNF4A]	4
MOTIF[MA0138.2:Nrsf]	3
MOTIF[MA0139.1:CTCF]	72
MOTIF[MA0147.1:Cmyc]	7
MOTIF[MA0148.1:FOXA1]	1
MOTIF[MA0154.1:EBF]	3
MOTIF[MA0159.1:RXR]	1
MOTIF[MA0162.1:Egr1]	26
NON_SYNONYMOUS_CODING	11256
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION	234
NON_SYNONYMOUS_START	1
PROTEIN_PROTEIN_INTERACTION_LOCUS	5
PROTEIN_STRUCTURAL_INTERACTION_LOCUS	257
SPLICE_SITE_REGION	28
SPLICE_SITE_REGION+CODON_DELETION	2
SPLICE_SITE_REGION+CODON_INSERTION	1
SPLICE_SITE_REGION+SYNONYMOUS_CODING	253
START_GAINED	228
START_LOST	16
START_LOST+CODON_CHANGE_PLUS_CODON_DELETION	1
START_LOST+CODON_CHANGE_PLUS_CODON_INSERTION	1
STOP_GAINED	122
STOP_GAINED+CODON_INSERTION	1
STOP_GAINED+SPLICE_SITE_REGION	3
STOP_LOST	20
STOP_LOST+SPLICE_SITE_REGION	3
SYNONYMOUS_CODING	11674
SYNONYMOUS_STOP	12
TRANSCRIPT	1
None	0

Type	Total Variants
None	0