Name: liblalt53_variants funcotatedb37
Variants: 13825
Novel Variants: 8882 (Not in latest DbSNP Build)
| Type | Total Variants | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| Total SNVs | 13825 | 5715 0|1 | 7292 0/1 | 548 0/1/2 | 104 0/1/2/3 | 22 0/1/2/3/4 | 1 0/1/2/3/4/5 | 1 0/1/2/3/4/5/6 | 142 1|0 |
| Total Gene-associated SNVs | 13825 | 5715 0|1 | 7292 0/1 | 548 0/1/2 | 104 0/1/2/3 | 22 0/1/2/3/4 | 1 0/1/2/3/4/5 | 1 0/1/2/3/4/5/6 | 142 1|0 |
| Type | Total Variants |
|---|---|
| 1 | |
| CODON_CHANGE_PLUS_CODON_DELETION | 263 |
| CODON_CHANGE_PLUS_CODON_INSERTION | 58 |
| CODON_DELETION | 91 |
| CODON_INSERTION | 68 |
| FRAME_SHIFT | 595 |
| FRAME_SHIFT+SPLICE_SITE_REGION | 27 |
| FRAME_SHIFT+START_LOST | 3 |
| FRAME_SHIFT+STOP_GAINED | 24 |
| FRAME_SHIFT+STOP_GAINED+SPLICE_SITE_REGION | 2 |
| MOTIF[MA0014.1:Pax5] | 1 |
| MOTIF[MA0062.1:Gabp] | 1 |
| MOTIF[MA0062.2:Gabp] | 2 |
| MOTIF[MA0079.2:SP1] | 1 |
| MOTIF[MA0099.2:AP1] | 1 |
| MOTIF[MA0105.1:NFKB] | 1 |
| MOTIF[MA0139.1:CTCF] | 5 |
| MOTIF[MA0147.1:Cmyc] | 1 |
| MOTIF[MA0162.1:Egr1] | 2 |
| NON_SYNONYMOUS_CODING | 2400 |
| NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION | 57 |
| PROTEIN_PROTEIN_INTERACTION_LOCUS | 5 |
| PROTEIN_STRUCTURAL_INTERACTION_LOCUS | 62 |
| SPLICE_SITE_REGION | 5 |
| SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_INSERTION | 1 |
| SPLICE_SITE_REGION+CODON_INSERTION | 2 |
| SPLICE_SITE_REGION+SYNONYMOUS_CODING | 28 |
| SPLICE_SITE_REGION+SYNONYMOUS_STOP | 1 |
| START_GAINED | 23 |
| START_LOST | 6 |
| START_LOST+SPLICE_SITE_REGION | 1 |
| STOP_GAINED | 116 |
| STOP_GAINED+CODON_CHANGE_PLUS_CODON_INSERTION | 4 |
| STOP_GAINED+CODON_INSERTION | 2 |
| STOP_GAINED+SPLICE_SITE_REGION | 2 |
| STOP_GAINED+SPLICE_SITE_REGION+CODON_CHANGE_PLUS_CODON_DELETION | 1 |
| STOP_LOST | 3 |
| SYNONYMOUS_CODING | 1007 |
| None | 0 |
| Type | Total Variants |
|---|---|
| base_qual | 9 |
| base_qual;clustered_events | 1 |
| base_qual;clustered_events;contamination;haplotype | 12 |
| base_qual;clustered_events;contamination;haplotype;map_qual;orientation;weak_evidence | 1 |
| base_qual;clustered_events;contamination;haplotype;map_qual;weak_evidence | 1 |
| base_qual;clustered_events;contamination;haplotype;normal_artifact;weak_evidence | 4 |
| base_qual;clustered_events;contamination;haplotype;orientation;panel_of_normals | 1 |
| base_qual;clustered_events;contamination;haplotype;panel_of_normals | 4 |
| base_qual;clustered_events;contamination;haplotype;strand_bias | 2 |
| base_qual;clustered_events;contamination;haplotype;weak_evidence | 28 |
| base_qual;clustered_events;haplotype | 15 |
| base_qual;clustered_events;haplotype;strand_bias | 3 |
| base_qual;clustered_events;haplotype;strand_bias;weak_evidence | 2 |
| base_qual;clustered_events;haplotype;weak_evidence | 37 |
| base_qual;clustered_events;strand_bias | 5 |
| base_qual;clustered_events;strand_bias;weak_evidence | 3 |
| base_qual;clustered_events;weak_evidence | 1 |
| base_qual;contamination | 1 |
| base_qual;contamination;germline;multiallelic;slippage;weak_evidence | 1 |
| base_qual;contamination;germline;slippage;weak_evidence | 5 |
| base_qual;contamination;germline;weak_evidence | 3 |
| base_qual;contamination;haplotype | 1 |
| base_qual;contamination;haplotype;orientation;weak_evidence | 1 |
| base_qual;contamination;haplotype;weak_evidence | 13 |
| base_qual;contamination;slippage | 2 |
| base_qual;contamination;slippage;weak_evidence | 2 |
| base_qual;contamination;weak_evidence | 5 |
| base_qual;fragment | 1 |
| base_qual;fragment;haplotype | 1 |
| base_qual;germline;haplotype;weak_evidence | 1 |
| base_qual;germline;normal_artifact;weak_evidence | 1 |
| base_qual;haplotype | 19 |
| base_qual;haplotype;strand_bias | 12 |
| base_qual;haplotype;strand_bias;weak_evidence | 3 |
| base_qual;haplotype;weak_evidence | 41 |
| base_qual;multiallelic;strand_bias | 1 |
| base_qual;normal_artifact;panel_of_normals;strand_bias;weak_evidence | 1 |
| base_qual;normal_artifact;strand_bias;weak_evidence | 2 |
| base_qual;strand_bias | 26 |
| base_qual;strand_bias;weak_evidence | 37 |
| base_qual;weak_evidence | 39 |
| clustered_events | 189 |
| clustered_events;contamination | 33 |
| clustered_events;contamination;fragment;haplotype;map_qual;orientation | 1 |
| clustered_events;contamination;fragment;haplotype;map_qual;weak_evidence | 2 |
| clustered_events;contamination;fragment;haplotype;panel_of_normals;strand_bias | 1 |
| clustered_events;contamination;fragment;haplotype;strand_bias;weak_evidence | 2 |
| clustered_events;contamination;germline | 1 |
| clustered_events;contamination;germline;haplotype | 8 |
| clustered_events;contamination;germline;haplotype;map_qual | 1 |
| clustered_events;contamination;germline;haplotype;map_qual;normal_artifact | 1 |
| clustered_events;contamination;germline;haplotype;normal_artifact | 1 |
| clustered_events;contamination;germline;haplotype;normal_artifact;weak_evidence | 4 |
| clustered_events;contamination;germline;haplotype;weak_evidence | 25 |
| clustered_events;contamination;germline;map_qual | 2 |
| clustered_events;contamination;germline;map_qual;weak_evidence | 1 |
| clustered_events;contamination;germline;multiallelic | 1 |
| clustered_events;contamination;germline;slippage;weak_evidence | 1 |
| clustered_events;contamination;germline;weak_evidence | 4 |
| clustered_events;contamination;haplotype | 288 |
| clustered_events;contamination;haplotype;map_qual | 74 |
| clustered_events;contamination;haplotype;map_qual;normal_artifact | 23 |
| clustered_events;contamination;haplotype;map_qual;normal_artifact;orientation | 1 |
| clustered_events;contamination;haplotype;map_qual;normal_artifact;panel_of_normals;strand_bias | 2 |
| clustered_events;contamination;haplotype;map_qual;normal_artifact;strand_bias | 1 |
| clustered_events;contamination;haplotype;map_qual;normal_artifact;weak_evidence | 9 |
| clustered_events;contamination;haplotype;map_qual;orientation | 2 |
| clustered_events;contamination;haplotype;map_qual;orientation;strand_bias | 1 |
| clustered_events;contamination;haplotype;map_qual;panel_of_normals | 8 |
| clustered_events;contamination;haplotype;map_qual;panel_of_normals;strand_bias;weak_evidence | 1 |
| clustered_events;contamination;haplotype;map_qual;panel_of_normals;weak_evidence | 1 |
| clustered_events;contamination;haplotype;map_qual;strand_bias | 3 |
| clustered_events;contamination;haplotype;map_qual;strand_bias;weak_evidence | 2 |
| clustered_events;contamination;haplotype;map_qual;weak_evidence | 11 |
| clustered_events;contamination;haplotype;normal_artifact | 82 |
| clustered_events;contamination;haplotype;normal_artifact;panel_of_normals | 8 |
| clustered_events;contamination;haplotype;normal_artifact;panel_of_normals;slippage | 2 |
| clustered_events;contamination;haplotype;normal_artifact;panel_of_normals;strand_bias | 6 |
| clustered_events;contamination;haplotype;normal_artifact;panel_of_normals;strand_bias;weak_evidence | 2 |
| clustered_events;contamination;haplotype;normal_artifact;slippage | 1 |
| clustered_events;contamination;haplotype;normal_artifact;strand_bias | 27 |
| clustered_events;contamination;haplotype;normal_artifact;strand_bias;weak_evidence | 14 |
| clustered_events;contamination;haplotype;normal_artifact;weak_evidence | 80 |
| clustered_events;contamination;haplotype;orientation | 10 |
| clustered_events;contamination;haplotype;orientation;panel_of_normals;weak_evidence | 1 |
| clustered_events;contamination;haplotype;orientation;weak_evidence | 9 |
| clustered_events;contamination;haplotype;panel_of_normals | 19 |
| clustered_events;contamination;haplotype;panel_of_normals;position | 1 |
| clustered_events;contamination;haplotype;panel_of_normals;slippage | 1 |
| clustered_events;contamination;haplotype;panel_of_normals;weak_evidence | 9 |
| clustered_events;contamination;haplotype;position | 2 |
| clustered_events;contamination;haplotype;slippage;weak_evidence | 2 |
| clustered_events;contamination;haplotype;strand_bias | 39 |
| clustered_events;contamination;haplotype;strand_bias;weak_evidence | 13 |
| clustered_events;contamination;haplotype;weak_evidence | 602 |
| clustered_events;contamination;map_qual | 13 |
| clustered_events;contamination;map_qual;normal_artifact | 8 |
| clustered_events;contamination;map_qual;normal_artifact;orientation | 2 |
| clustered_events;contamination;map_qual;normal_artifact;panel_of_normals | 5 |
| clustered_events;contamination;map_qual;normal_artifact;panel_of_normals;weak_evidence | 1 |
| clustered_events;contamination;map_qual;normal_artifact;slippage;weak_evidence | 1 |
| clustered_events;contamination;map_qual;normal_artifact;strand_bias | 2 |
| clustered_events;contamination;map_qual;normal_artifact;strand_bias;weak_evidence | 1 |
| clustered_events;contamination;map_qual;normal_artifact;weak_evidence | 3 |
| clustered_events;contamination;map_qual;orientation | 3 |
| clustered_events;contamination;map_qual;orientation;panel_of_normals | 1 |
| clustered_events;contamination;map_qual;panel_of_normals | 3 |
| clustered_events;contamination;map_qual;panel_of_normals;weak_evidence | 6 |
| clustered_events;contamination;map_qual;weak_evidence | 2 |
| clustered_events;contamination;multiallelic | 5 |
| clustered_events;contamination;multiallelic;normal_artifact | 1 |
| clustered_events;contamination;multiallelic;normal_artifact;panel_of_normals | 2 |
| clustered_events;contamination;multiallelic;panel_of_normals | 1 |
| clustered_events;contamination;multiallelic;slippage;weak_evidence | 1 |
| clustered_events;contamination;multiallelic;weak_evidence | 1 |
| clustered_events;contamination;normal_artifact | 20 |
| clustered_events;contamination;normal_artifact;panel_of_normals | 12 |
| clustered_events;contamination;normal_artifact;panel_of_normals;slippage | 2 |
| clustered_events;contamination;normal_artifact;panel_of_normals;slippage;weak_evidence | 5 |
| clustered_events;contamination;normal_artifact;panel_of_normals;strand_bias | 2 |
| clustered_events;contamination;normal_artifact;panel_of_normals;strand_bias;weak_evidence | 1 |
| clustered_events;contamination;normal_artifact;panel_of_normals;weak_evidence | 3 |
| clustered_events;contamination;normal_artifact;slippage | 3 |
| clustered_events;contamination;normal_artifact;slippage;weak_evidence | 3 |
| clustered_events;contamination;normal_artifact;weak_evidence | 6 |
| clustered_events;contamination;orientation | 2 |
| clustered_events;contamination;orientation;panel_of_normals;weak_evidence | 1 |
| clustered_events;contamination;orientation;weak_evidence | 2 |
| clustered_events;contamination;panel_of_normals | 7 |
| clustered_events;contamination;panel_of_normals;slippage | 3 |
| clustered_events;contamination;panel_of_normals;slippage;weak_evidence | 2 |
| clustered_events;contamination;panel_of_normals;weak_evidence | 7 |
| clustered_events;contamination;slippage | 3 |
| clustered_events;contamination;slippage;strand_bias;weak_evidence | 1 |
| clustered_events;contamination;slippage;weak_evidence | 2 |
| clustered_events;contamination;strand_bias | 3 |
| clustered_events;contamination;strand_bias;weak_evidence | 2 |
| clustered_events;contamination;weak_evidence | 23 |
| clustered_events;fragment;haplotype;map_qual | 5 |
| clustered_events;fragment;haplotype;map_qual;weak_evidence | 1 |
| clustered_events;fragment;haplotype;normal_artifact | 1 |
| clustered_events;fragment;haplotype;weak_evidence | 2 |
| clustered_events;germline | 8 |
| clustered_events;germline;haplotype | 22 |
| clustered_events;germline;haplotype;map_qual | 6 |
| clustered_events;germline;haplotype;map_qual;normal_artifact | 1 |
| clustered_events;germline;haplotype;map_qual;panel_of_normals | 1 |
| clustered_events;germline;haplotype;strand_bias | 1 |
| clustered_events;germline;map_qual | 4 |
| clustered_events;germline;map_qual;multiallelic;normal_artifact | 1 |
| clustered_events;germline;map_qual;multiallelic;normal_artifact;panel_of_normals | 1 |
| clustered_events;germline;map_qual;normal_artifact | 2 |
| clustered_events;germline;multiallelic | 1 |
| clustered_events;germline;multiallelic;normal_artifact | 32 |
| clustered_events;germline;multiallelic;normal_artifact;panel_of_normals | 10 |
| clustered_events;germline;multiallelic;normal_artifact;slippage | 2 |
| clustered_events;germline;multiallelic;normal_artifact;strand_bias | 1 |
| clustered_events;germline;multiallelic;normal_artifact;weak_evidence | 1 |
| clustered_events;germline;normal_artifact | 1 |
| clustered_events;germline;normal_artifact;slippage;weak_evidence | 1 |
| clustered_events;haplotype | 1310 |
| clustered_events;haplotype;map_qual | 112 |
| clustered_events;haplotype;map_qual;normal_artifact | 21 |
| clustered_events;haplotype;map_qual;normal_artifact;orientation | 1 |
| clustered_events;haplotype;map_qual;normal_artifact;panel_of_normals | 8 |
| clustered_events;haplotype;map_qual;normal_artifact;panel_of_normals;strand_bias | 2 |
| clustered_events;haplotype;map_qual;normal_artifact;strand_bias | 2 |
| clustered_events;haplotype;map_qual;normal_artifact;weak_evidence | 2 |
| clustered_events;haplotype;map_qual;orientation | 4 |
| clustered_events;haplotype;map_qual;orientation;panel_of_normals | 1 |
| clustered_events;haplotype;map_qual;panel_of_normals | 13 |
| clustered_events;haplotype;map_qual;strand_bias | 2 |
| clustered_events;haplotype;map_qual;weak_evidence | 13 |
| clustered_events;haplotype;normal_artifact | 215 |
| clustered_events;haplotype;normal_artifact;orientation | 4 |
| clustered_events;haplotype;normal_artifact;orientation;panel_of_normals | 1 |
| clustered_events;haplotype;normal_artifact;panel_of_normals | 38 |
| clustered_events;haplotype;normal_artifact;panel_of_normals;strand_bias | 1 |
| clustered_events;haplotype;normal_artifact;panel_of_normals;strand_bias;weak_evidence | 1 |
| clustered_events;haplotype;normal_artifact;position | 1 |
| clustered_events;haplotype;normal_artifact;slippage | 1 |
| clustered_events;haplotype;normal_artifact;strand_bias | 15 |
| clustered_events;haplotype;normal_artifact;strand_bias;weak_evidence | 6 |
| clustered_events;haplotype;normal_artifact;weak_evidence | 38 |
| clustered_events;haplotype;orientation | 25 |
| clustered_events;haplotype;orientation;strand_bias | 4 |
| clustered_events;haplotype;orientation;weak_evidence | 12 |
| clustered_events;haplotype;panel_of_normals | 47 |
| clustered_events;haplotype;panel_of_normals;strand_bias | 1 |
| clustered_events;haplotype;position | 1 |
| clustered_events;haplotype;position;strand_bias | 1 |
| clustered_events;haplotype;slippage | 1 |
| clustered_events;haplotype;strand_bias | 73 |
| clustered_events;haplotype;strand_bias;weak_evidence | 8 |
| clustered_events;haplotype;weak_evidence | 383 |
| clustered_events;map_qual | 45 |
| clustered_events;map_qual;multiallelic;normal_artifact;panel_of_normals | 1 |
| clustered_events;map_qual;multiallelic;normal_artifact;strand_bias | 1 |
| clustered_events;map_qual;normal_artifact | 24 |
| clustered_events;map_qual;normal_artifact;orientation | 1 |
| clustered_events;map_qual;normal_artifact;panel_of_normals | 17 |
| clustered_events;map_qual;normal_artifact;panel_of_normals;strand_bias | 1 |
| clustered_events;map_qual;normal_artifact;panel_of_normals;weak_evidence | 1 |
| clustered_events;map_qual;normal_artifact;strand_bias | 4 |
| clustered_events;map_qual;normal_artifact;weak_evidence | 3 |
| clustered_events;map_qual;orientation | 2 |
| clustered_events;map_qual;orientation;strand_bias | 1 |
| clustered_events;map_qual;panel_of_normals | 17 |
| clustered_events;map_qual;strand_bias | 2 |
| clustered_events;map_qual;weak_evidence | 5 |
| clustered_events;multiallelic | 22 |
| clustered_events;multiallelic;normal_artifact | 20 |
| clustered_events;multiallelic;normal_artifact;panel_of_normals | 11 |
| clustered_events;multiallelic;normal_artifact;slippage | 1 |
| clustered_events;multiallelic;orientation | 2 |
| clustered_events;multiallelic;panel_of_normals | 4 |
| clustered_events;multiallelic;weak_evidence | 1 |
| clustered_events;normal_artifact | 123 |
| clustered_events;normal_artifact;panel_of_normals | 52 |
| clustered_events;normal_artifact;panel_of_normals;slippage | 1 |
| clustered_events;normal_artifact;slippage | 1 |
| clustered_events;normal_artifact;slippage;weak_evidence | 1 |
| clustered_events;normal_artifact;strand_bias | 2 |
| clustered_events;normal_artifact;weak_evidence | 8 |
| clustered_events;orientation | 11 |
| clustered_events;orientation;weak_evidence | 1 |
| clustered_events;panel_of_normals | 47 |
| clustered_events;panel_of_normals;weak_evidence | 4 |
| clustered_events;slippage | 1 |
| clustered_events;strand_bias | 2 |
| clustered_events;weak_evidence | 13 |
| contamination | 79 |
| contamination;fragment;germline;weak_evidence | 1 |
| contamination;fragment;haplotype;weak_evidence | 1 |
| contamination;fragment;map_qual;weak_evidence | 1 |
| contamination;germline | 10 |
| contamination;germline;haplotype | 3 |
| contamination;germline;haplotype;map_qual;panel_of_normals | 1 |
| contamination;germline;haplotype;map_qual;weak_evidence | 3 |
| contamination;germline;haplotype;normal_artifact;weak_evidence | 1 |
| contamination;germline;haplotype;slippage;weak_evidence | 4 |
| contamination;germline;haplotype;weak_evidence | 7 |
| contamination;germline;map_qual | 4 |
| contamination;germline;map_qual;normal_artifact | 2 |
| contamination;germline;map_qual;weak_evidence | 8 |
| contamination;germline;multiallelic | 1 |
| contamination;germline;multiallelic;normal_artifact | 3 |
| contamination;germline;multiallelic;normal_artifact;panel_of_normals;slippage;weak_evidence | 2 |
| contamination;germline;multiallelic;normal_artifact;panel_of_normals;weak_evidence | 3 |
| contamination;germline;multiallelic;normal_artifact;slippage | 2 |
| contamination;germline;multiallelic;normal_artifact;slippage;weak_evidence | 14 |
| contamination;germline;multiallelic;normal_artifact;weak_evidence | 9 |
| contamination;germline;multiallelic;panel_of_normals;slippage;weak_evidence | 1 |
| contamination;germline;multiallelic;panel_of_normals;weak_evidence | 1 |
| contamination;germline;multiallelic;slippage;weak_evidence | 3 |
| contamination;germline;multiallelic;weak_evidence | 7 |
| contamination;germline;normal_artifact;panel_of_normals;slippage | 1 |
| contamination;germline;normal_artifact;panel_of_normals;slippage;weak_evidence | 5 |
| contamination;germline;normal_artifact;slippage;weak_evidence | 15 |
| contamination;germline;normal_artifact;weak_evidence | 4 |
| contamination;germline;panel_of_normals;slippage;weak_evidence | 13 |
| contamination;germline;panel_of_normals;weak_evidence | 6 |
| contamination;germline;position | 1 |
| contamination;germline;slippage | 2 |
| contamination;germline;slippage;weak_evidence | 100 |
| contamination;germline;weak_evidence | 60 |
| contamination;haplotype | 75 |
| contamination;haplotype;map_qual | 7 |
| contamination;haplotype;map_qual;normal_artifact | 1 |
| contamination;haplotype;map_qual;normal_artifact;panel_of_normals | 3 |
| contamination;haplotype;map_qual;normal_artifact;panel_of_normals;strand_bias | 2 |
| contamination;haplotype;map_qual;normal_artifact;panel_of_normals;weak_evidence | 1 |
| contamination;haplotype;map_qual;normal_artifact;strand_bias | 2 |
| contamination;haplotype;map_qual;normal_artifact;strand_bias;weak_evidence | 3 |
| contamination;haplotype;map_qual;normal_artifact;weak_evidence | 3 |
| contamination;haplotype;map_qual;orientation | 2 |
| contamination;haplotype;map_qual;panel_of_normals | 7 |
| contamination;haplotype;map_qual;strand_bias | 1 |
| contamination;haplotype;map_qual;strand_bias;weak_evidence | 1 |
| contamination;haplotype;map_qual;weak_evidence | 4 |
| contamination;haplotype;normal_artifact | 12 |
| contamination;haplotype;normal_artifact;orientation | 1 |
| contamination;haplotype;normal_artifact;panel_of_normals | 5 |
| contamination;haplotype;normal_artifact;panel_of_normals;slippage | 1 |
| contamination;haplotype;normal_artifact;panel_of_normals;strand_bias | 1 |
| contamination;haplotype;normal_artifact;position;weak_evidence | 2 |
| contamination;haplotype;normal_artifact;slippage | 1 |
| contamination;haplotype;normal_artifact;slippage;weak_evidence | 6 |
| contamination;haplotype;normal_artifact;strand_bias | 6 |
| contamination;haplotype;normal_artifact;strand_bias;weak_evidence | 7 |
| contamination;haplotype;normal_artifact;weak_evidence | 32 |
| contamination;haplotype;orientation | 9 |
| contamination;haplotype;orientation;panel_of_normals | 1 |
| contamination;haplotype;orientation;weak_evidence | 2 |
| contamination;haplotype;panel_of_normals | 7 |
| contamination;haplotype;panel_of_normals;slippage | 1 |
| contamination;haplotype;panel_of_normals;slippage;strand_bias | 1 |
| contamination;haplotype;panel_of_normals;slippage;weak_evidence | 1 |
| contamination;haplotype;panel_of_normals;strand_bias | 1 |
| contamination;haplotype;panel_of_normals;weak_evidence | 6 |
| contamination;haplotype;position | 1 |
| contamination;haplotype;slippage | 2 |
| contamination;haplotype;slippage;weak_evidence | 13 |
| contamination;haplotype;strand_bias | 3 |
| contamination;haplotype;strand_bias;weak_evidence | 4 |
| contamination;haplotype;weak_evidence | 350 |
| contamination;map_qual | 17 |
| contamination;map_qual;normal_artifact | 15 |
| contamination;map_qual;normal_artifact;orientation;panel_of_normals;weak_evidence | 1 |
| contamination;map_qual;normal_artifact;panel_of_normals | 14 |
| contamination;map_qual;normal_artifact;panel_of_normals;strand_bias | 4 |
| contamination;map_qual;normal_artifact;panel_of_normals;weak_evidence | 3 |
| contamination;map_qual;normal_artifact;strand_bias | 9 |
| contamination;map_qual;normal_artifact;strand_bias;weak_evidence | 2 |
| contamination;map_qual;normal_artifact;weak_evidence | 7 |
| contamination;map_qual;orientation;panel_of_normals;strand_bias | 1 |
| contamination;map_qual;orientation;weak_evidence | 1 |
| contamination;map_qual;panel_of_normals | 10 |
| contamination;map_qual;panel_of_normals;strand_bias | 6 |
| contamination;map_qual;panel_of_normals;strand_bias;weak_evidence | 1 |
| contamination;map_qual;panel_of_normals;weak_evidence | 3 |
| contamination;map_qual;slippage;weak_evidence | 2 |
| contamination;map_qual;strand_bias | 1 |
| contamination;map_qual;strand_bias;weak_evidence | 3 |
| contamination;map_qual;weak_evidence | 23 |
| contamination;multiallelic | 2 |
| contamination;multiallelic;normal_artifact | 2 |
| contamination;multiallelic;normal_artifact;panel_of_normals | 2 |
| contamination;multiallelic;normal_artifact;slippage | 1 |
| contamination;multiallelic;normal_artifact;slippage;weak_evidence | 7 |
| contamination;multiallelic;normal_artifact;weak_evidence | 2 |
| contamination;multiallelic;panel_of_normals;slippage | 1 |
| contamination;multiallelic;panel_of_normals;slippage;weak_evidence | 1 |
| contamination;multiallelic;panel_of_normals;weak_evidence | 3 |
| contamination;multiallelic;slippage | 3 |
| contamination;multiallelic;slippage;weak_evidence | 5 |
| contamination;multiallelic;weak_evidence | 6 |
| contamination;normal_artifact | 26 |
| contamination;normal_artifact;orientation;panel_of_normals | 2 |
| contamination;normal_artifact;orientation;panel_of_normals;strand_bias | 1 |
| contamination;normal_artifact;orientation;panel_of_normals;weak_evidence | 1 |
| contamination;normal_artifact;orientation;strand_bias | 1 |
| contamination;normal_artifact;panel_of_normals | 12 |
| contamination;normal_artifact;panel_of_normals;slippage | 6 |
| contamination;normal_artifact;panel_of_normals;slippage;weak_evidence | 16 |
| contamination;normal_artifact;panel_of_normals;strand_bias | 1 |
| contamination;normal_artifact;panel_of_normals;weak_evidence | 8 |
| contamination;normal_artifact;slippage | 52 |
| contamination;normal_artifact;slippage;weak_evidence | 103 |
| contamination;normal_artifact;strand_bias | 6 |
| contamination;normal_artifact;strand_bias;weak_evidence | 4 |
| contamination;normal_artifact;weak_evidence | 29 |
| contamination;orientation | 28 |
| contamination;orientation;panel_of_normals | 2 |
| contamination;orientation;panel_of_normals;weak_evidence | 2 |
| contamination;orientation;strand_bias | 2 |
| contamination;orientation;weak_evidence | 67 |
| contamination;panel_of_normals | 23 |
| contamination;panel_of_normals;slippage | 7 |
| contamination;panel_of_normals;slippage;strand_bias;weak_evidence | 1 |
| contamination;panel_of_normals;slippage;weak_evidence | 22 |
| contamination;panel_of_normals;strand_bias | 3 |
| contamination;panel_of_normals;weak_evidence | 18 |
| contamination;slippage | 89 |
| contamination;slippage;strand_bias;weak_evidence | 1 |
| contamination;slippage;weak_evidence | 383 |
| contamination;strand_bias;weak_evidence | 3 |
| contamination;weak_evidence | 331 |
| fragment | 5 |
| fragment;germline;multiallelic;normal_artifact | 1 |
| fragment;haplotype | 1 |
| fragment;orientation;weak_evidence | 1 |
| fragment;weak_evidence | 11 |
| germline | 28 |
| germline;haplotype | 10 |
| germline;haplotype;map_qual | 2 |
| germline;haplotype;map_qual;panel_of_normals | 1 |
| germline;haplotype;panel_of_normals;weak_evidence | 2 |
| germline;haplotype;slippage;weak_evidence | 1 |
| germline;map_qual | 6 |
| germline;map_qual;normal_artifact | 4 |
| germline;map_qual;normal_artifact;strand_bias | 1 |
| germline;multiallelic | 3 |
| germline;multiallelic;normal_artifact | 80 |
| germline;multiallelic;normal_artifact;panel_of_normals | 49 |
| germline;multiallelic;normal_artifact;panel_of_normals;slippage | 41 |
| germline;multiallelic;normal_artifact;panel_of_normals;slippage;weak_evidence | 18 |
| germline;multiallelic;normal_artifact;panel_of_normals;weak_evidence | 12 |
| germline;multiallelic;normal_artifact;slippage | 60 |
| germline;multiallelic;normal_artifact;slippage;weak_evidence | 36 |
| germline;multiallelic;normal_artifact;weak_evidence | 14 |
| germline;multiallelic;panel_of_normals | 1 |
| germline;multiallelic;panel_of_normals;slippage | 2 |
| germline;multiallelic;panel_of_normals;slippage;weak_evidence | 4 |
| germline;multiallelic;panel_of_normals;weak_evidence | 3 |
| germline;multiallelic;slippage | 3 |
| germline;multiallelic;slippage;weak_evidence | 12 |
| germline;multiallelic;weak_evidence | 5 |
| germline;normal_artifact | 6 |
| germline;normal_artifact;panel_of_normals | 3 |
| germline;normal_artifact;panel_of_normals;slippage | 1 |
| germline;normal_artifact;panel_of_normals;slippage;weak_evidence | 6 |
| germline;normal_artifact;panel_of_normals;weak_evidence | 1 |
| germline;normal_artifact;slippage | 11 |
| germline;normal_artifact;slippage;weak_evidence | 33 |
| germline;normal_artifact;weak_evidence | 3 |
| germline;panel_of_normals | 7 |
| germline;panel_of_normals;slippage | 4 |
| germline;panel_of_normals;slippage;weak_evidence | 13 |
| germline;panel_of_normals;weak_evidence | 4 |
| germline;slippage | 9 |
| germline;slippage;weak_evidence | 55 |
| germline;weak_evidence | 6 |
| haplotype | 244 |
| haplotype;map_qual | 22 |
| haplotype;map_qual;normal_artifact | 2 |
| haplotype;map_qual;normal_artifact;panel_of_normals | 4 |
| haplotype;map_qual;normal_artifact;panel_of_normals;slippage;weak_evidence | 1 |
| haplotype;map_qual;orientation;panel_of_normals | 1 |
| haplotype;map_qual;panel_of_normals | 10 |
| haplotype;map_qual;panel_of_normals;strand_bias | 1 |
| haplotype;map_qual;strand_bias | 2 |
| haplotype;map_qual;strand_bias;weak_evidence | 1 |
| haplotype;map_qual;weak_evidence | 10 |
| haplotype;normal_artifact | 61 |
| haplotype;normal_artifact;orientation;panel_of_normals | 1 |
| haplotype;normal_artifact;panel_of_normals | 25 |
| haplotype;normal_artifact;panel_of_normals;slippage | 2 |
| haplotype;normal_artifact;panel_of_normals;slippage;weak_evidence | 1 |
| haplotype;normal_artifact;slippage | 3 |
| haplotype;normal_artifact;slippage;weak_evidence | 1 |
| haplotype;normal_artifact;strand_bias | 3 |
| haplotype;normal_artifact;strand_bias;weak_evidence | 1 |
| haplotype;normal_artifact;weak_evidence | 4 |
| haplotype;orientation | 49 |
| haplotype;orientation;weak_evidence | 4 |
| haplotype;panel_of_normals | 15 |
| haplotype;panel_of_normals;strand_bias;weak_evidence | 1 |
| haplotype;panel_of_normals;weak_evidence | 1 |
| haplotype;position | 2 |
| haplotype;slippage | 2 |
| haplotype;slippage;weak_evidence | 2 |
| haplotype;strand_bias | 4 |
| haplotype;strand_bias;weak_evidence | 3 |
| haplotype;weak_evidence | 139 |
| map_qual | 71 |
| map_qual;multiallelic | 2 |
| map_qual;normal_artifact | 55 |
| map_qual;normal_artifact;orientation | 3 |
| map_qual;normal_artifact;orientation;panel_of_normals | 1 |
| map_qual;normal_artifact;panel_of_normals | 28 |
| map_qual;normal_artifact;panel_of_normals;strand_bias | 5 |
| map_qual;normal_artifact;strand_bias | 12 |
| map_qual;normal_artifact;weak_evidence | 2 |
| map_qual;orientation | 1 |
| map_qual;orientation;panel_of_normals | 1 |
| map_qual;orientation;panel_of_normals;weak_evidence | 1 |
| map_qual;panel_of_normals | 44 |
| map_qual;panel_of_normals;strand_bias | 6 |
| map_qual;panel_of_normals;weak_evidence | 1 |
| map_qual;strand_bias | 4 |
| map_qual;strand_bias;weak_evidence | 1 |
| map_qual;weak_evidence | 33 |
| multiallelic | 5 |
| multiallelic;normal_artifact | 7 |
| multiallelic;normal_artifact;panel_of_normals | 7 |
| multiallelic;normal_artifact;panel_of_normals;slippage | 10 |
| multiallelic;normal_artifact;panel_of_normals;slippage;weak_evidence | 12 |
| multiallelic;normal_artifact;panel_of_normals;weak_evidence | 7 |
| multiallelic;normal_artifact;slippage | 16 |
| multiallelic;normal_artifact;slippage;weak_evidence | 13 |
| multiallelic;normal_artifact;weak_evidence | 1 |
| multiallelic;panel_of_normals | 3 |
| multiallelic;panel_of_normals;slippage | 3 |
| multiallelic;panel_of_normals;slippage;weak_evidence | 2 |
| multiallelic;panel_of_normals;weak_evidence | 11 |
| multiallelic;slippage | 9 |
| multiallelic;slippage;weak_evidence | 8 |
| multiallelic;weak_evidence | 9 |
| normal_artifact | 88 |
| normal_artifact;orientation;panel_of_normals | 1 |
| normal_artifact;orientation;weak_evidence | 2 |
| normal_artifact;panel_of_normals | 68 |
| normal_artifact;panel_of_normals;slippage | 12 |
| normal_artifact;panel_of_normals;slippage;weak_evidence | 16 |
| normal_artifact;panel_of_normals;strand_bias | 3 |
| normal_artifact;panel_of_normals;weak_evidence | 7 |
| normal_artifact;slippage | 25 |
| normal_artifact;slippage;weak_evidence | 62 |
| normal_artifact;strand_bias | 8 |
| normal_artifact;weak_evidence | 21 |
| orientation | 192 |
| orientation;panel_of_normals | 3 |
| orientation;panel_of_normals;strand_bias | 1 |
| orientation;weak_evidence | 106 |
| panel_of_normals | 55 |
| panel_of_normals;slippage | 4 |
| panel_of_normals;slippage;weak_evidence | 14 |
| panel_of_normals;strand_bias | 1 |
| panel_of_normals;weak_evidence | 11 |
| PASS | 1917 |
| position;weak_evidence | 1 |
| slippage | 44 |
| slippage;strand_bias;weak_evidence | 1 |
| slippage;weak_evidence | 85 |
| strand_bias | 19 |
| strand_bias;weak_evidence | 11 |
| weak_evidence | 1992 |
| Quality | Value |
|---|---|
| Min | 0.0 |
| Average | 0.0 |
| Max | 0.0 |
| Read Depth | Value |
|---|---|
| Min | 0 |
| Average | 0.0 |
| Max | 0 |
| Type | Total Variants |
|---|---|
| None | 0 |