Name: paolo_maccallini_indel
Variants: 20252
Novel Variants: 2057 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 20252 12580 0/1 6933 1/1 739 1/2
Total Gene-associated SNVs 20252 12580 0/1 6933 1/1 739 1/2

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION144
CODON_CHANGE_PLUS_CODON_INSERTION95
CODON_DELETION57
CODON_INSERTION77
FRAME_SHIFT278
FRAME_SHIFT+SPLICE_SITE_REGION41
FRAME_SHIFT+START_LOST3
FRAME_SHIFT+STOP_GAINED5
FRAME_SHIFT+STOP_LOST5
GENE_FUSION1
GENE_FUSION_REVERESE1
MOTIF_DELETED6
MOTIF[MA0003.1:Ap2alpha]8
MOTIF[MA0047.1:FOXA2]1
MOTIF[MA0058.1:Max]1
MOTIF[MA0062.1:Gabp]2
MOTIF[MA0062.2:Gabp]4
MOTIF[MA0079.1:SP1]2
MOTIF[MA0079.2:SP1]9
MOTIF[MA0099.1:Cfos]1
MOTIF[MA0114.1:HNF4A]1
MOTIF[MA0139.1:CTCF]8
MOTIF[MA0154.1:EBF]1
MOTIF[MA0162.1:Egr1]7
PROTEIN_STRUCTURAL_INTERACTION_LOCUS2
SPLICE_SITE_REGION9
SPLICE_SITE_REGION+CODON_DELETION1
SPLICE_SITE_REGION+CODON_INSERTION2
START_LOST+CODON_DELETION2
STOP_GAINED+CODON_CHANGE_PLUS_CODON_DELETION1
TRANSCRIPT4
None0

Type Total Variants
779
None0

Type Total Variants
HIGH339
LOW60
MODERATE376
MODIFIER4
None0

Type Total Variants
PASS20252

Quality Value
Min11.12
Average891.243828263798
Max74873.8

Read Depth Value
Min0
Average46.84371913885048
Max1436

Type Total Variants
None0

Chromossome Total Variants
11943
10825
111153
121279
13415
14756
15637
16759
171121
18364
191182
21571
20493
21323
22437
31149
4930
5971
6933
71177
8703
9747
X375
Y9