Name: paolo_maccallini_indel
Variants: 20252
Novel Variants: 2057 (Not in latest DbSNP Build)
| Type | Total Variants |
|---|---|
| CODON_CHANGE_PLUS_CODON_DELETION | 144 |
| CODON_CHANGE_PLUS_CODON_INSERTION | 95 |
| CODON_DELETION | 57 |
| CODON_INSERTION | 77 |
| FRAME_SHIFT | 278 |
| FRAME_SHIFT+SPLICE_SITE_REGION | 41 |
| FRAME_SHIFT+START_LOST | 3 |
| FRAME_SHIFT+STOP_GAINED | 5 |
| FRAME_SHIFT+STOP_LOST | 5 |
| GENE_FUSION | 1 |
| GENE_FUSION_REVERESE | 1 |
| MOTIF_DELETED | 6 |
| MOTIF[MA0003.1:Ap2alpha] | 8 |
| MOTIF[MA0047.1:FOXA2] | 1 |
| MOTIF[MA0058.1:Max] | 1 |
| MOTIF[MA0062.1:Gabp] | 2 |
| MOTIF[MA0062.2:Gabp] | 4 |
| MOTIF[MA0079.1:SP1] | 2 |
| MOTIF[MA0079.2:SP1] | 9 |
| MOTIF[MA0099.1:Cfos] | 1 |
| MOTIF[MA0114.1:HNF4A] | 1 |
| MOTIF[MA0139.1:CTCF] | 8 |
| MOTIF[MA0154.1:EBF] | 1 |
| MOTIF[MA0162.1:Egr1] | 7 |
| PROTEIN_STRUCTURAL_INTERACTION_LOCUS | 2 |
| SPLICE_SITE_REGION | 9 |
| SPLICE_SITE_REGION+CODON_DELETION | 1 |
| SPLICE_SITE_REGION+CODON_INSERTION | 2 |
| START_LOST+CODON_DELETION | 2 |
| STOP_GAINED+CODON_CHANGE_PLUS_CODON_DELETION | 1 |
| TRANSCRIPT | 4 |
| None | 0 |
| Type | Total Variants |
|---|---|
| PASS | 20252 |
| Quality | Value |
|---|---|
| Min | 11.12 |
| Average | 891.243828263699 |
| Max | 74873.8 |
| Read Depth | Value |
|---|---|
| Min | 0 |
| Average | 46.84371913885048 |
| Max | 1436 |
| Type | Total Variants |
|---|---|
| None | 0 |