Name: hsm03
Variants: 55422
Novel Variants: 6157 (Not in latest DbSNP Build)
| Type | Total Variants |
|---|---|
| CODON_CHANGE_PLUS_CODON_INSERTION | 1 |
| FRAME_SHIFT | 2 |
| MOTIF[MA0003.1:Ap2alpha] | 5 |
| MOTIF[MA0014.1:Pax5] | 1 |
| MOTIF[MA0036.1:Gata2] | 1 |
| MOTIF[MA0047.1:FOXA2] | 1 |
| MOTIF[MA0047.2:FOXA2] | 3 |
| MOTIF[MA0058.1:Max] | 1 |
| MOTIF[MA0059.1:Cmyc] | 3 |
| MOTIF[MA0062.1:Gabp] | 1 |
| MOTIF[MA0062.2:Gabp] | 3 |
| MOTIF[MA0065.2:PPARG] | 1 |
| MOTIF[MA0079.1:SP1] | 1 |
| MOTIF[MA0079.2:SP1] | 1 |
| MOTIF[MA0083.1:Srf] | 1 |
| MOTIF[MA0093.1:USF1] | 3 |
| MOTIF[MA0095.1:Yy1] | 1 |
| MOTIF[MA0099.1:Cfos] | 3 |
| MOTIF[MA0099.2:AP1] | 1 |
| MOTIF[MA0114.1:HNF4A] | 2 |
| MOTIF[MA0138.2:Nrsf] | 2 |
| MOTIF[MA0139.1:CTCF] | 17 |
| MOTIF[MA0147.1:Cmyc] | 3 |
| MOTIF[MA0154.1:EBF] | 1 |
| MOTIF[MA0162.1:Egr1] | 4 |
| NON_SYNONYMOUS_CODING | 264 |
| NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION | 7 |
| PROTEIN_PROTEIN_INTERACTION_LOCUS | 1 |
| PROTEIN_STRUCTURAL_INTERACTION_LOCUS | 5 |
| SPLICE_SITE_REGION | 2 |
| SPLICE_SITE_REGION+SYNONYMOUS_CODING | 4 |
| START_GAINED | 35 |
| STOP_GAINED | 9 |
| SYNONYMOUS_CODING | 270 |
| SYNONYMOUS_STOP | 1 |
| None | 0 |
| Type | Total Variants |
|---|---|
| . | 55422 |
| Quality | Value |
|---|---|
| Min | 3.0 |
| Average | 45.8063404424236 |
| Max | 3070.0 |
| Read Depth | Value |
|---|---|
| Min | 1 |
| Average | 11.2202374508318 |
| Max | 2373 |
| Type | Total Variants |
|---|---|
| None | 0 |