Name: trf_44289
Variants: 5366
Novel Variants: 84 (Not in latest DbSNP Build)

Type Total Variants
Total SNVs 5366 2911 0/1 26 ./1 6 1/0 2423 1/1
Total Gene-associated SNVs 5366 2911 0/1 26 ./1 6 1/0 2423 1/1

Type Total Variants
CODON_CHANGE_PLUS_CODON_DELETION3
CODON_CHANGE_PLUS_CODON_INSERTION3
CODON_INSERTION1
FRAME_SHIFT1
FRAME_SHIFT+SPLICE_SITE_REGION1
GENE_FUSION1
MOTIF[MA0003.1:Ap2alpha]1
MOTIF[MA0024.1:E2F1]1
MOTIF[MA0036.1:Gata2]1
MOTIF[MA0058.1:Max]2
MOTIF[MA0062.1:Gabp]2
MOTIF[MA0062.2:Gabp]2
MOTIF[MA0079.1:SP1]2
MOTIF[MA0095.1:Yy1]1
MOTIF[MA0114.1:HNF4A]1
MOTIF[MA0139.1:CTCF]4
MOTIF[MA0147.1:Cmyc]1
MOTIF[MA0162.1:Egr1]3
NON_SYNONYMOUS_CODING400
NON_SYNONYMOUS_CODING+SPLICE_SITE_REGION8
PROTEIN_STRUCTURAL_INTERACTION_LOCUS23
SPLICE_SITE_REGION4
SPLICE_SITE_REGION+SYNONYMOUS_CODING14
START_GAINED14
START_LOST1
STOP_GAINED1
STOP_LOST1
SYNONYMOUS_CODING573
None0

Type Total Variants
79
MISSENSE403
NONSENSE1
SILENT587
None0

Type Total Variants
HIGH29
LOW615
MODERATE415
MODIFIER11
None0

Type Total Variants
PASS5366

Quality Value
Min0.04
Average854.540357808427
Max14152.1

Read Depth Value
Min0
Average44.343645173313455
Max447

Type Total Variants
None0
-61
3,31
2,21
3|29
-54
-5|-51
3|2|21
2|26
.,.25
228
318
2|2|21
61
5|5|5|5|51
52
5|21
2|2,2|21
6|21
5|51
2|51
.634

Chromossome Total Variants
1644
10394
11206
12353
1378
14203
1585
16250
17289
1883
19295
2454
20102
2159
22189
3268
4190
5260
6309
7277
8166
9164
X48