##fileformat=VCFv4.2 ##FILTER= ##FILTER= 60.0 || MQ < 40.0 || HaplotypeScore > 13.0 || MappingQualityRankSum < -12.5 || ReadPosRankSum < -8.0"> ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##GATKCommandLine.HaplotypeCaller= ##GATKCommandLine.SelectVariants= ##GATKCommandLine.VariantFiltration= 60.0 || MQ < 40.0 || HaplotypeScore > 13.0 || MappingQualityRankSum < -12.5 || ReadPosRankSum < -8.0] filterName=[my_snp_filter] genotypeFilterExpression=[] genotypeFilterName=[] clusterSize=3 clusterWindowSize=0 maskExtension=0 maskName=Mask filterNotInMask=false missingValuesInExpressionsShouldEvaluateAsFailing=false invalidatePreviousFilters=false invertFilterExpression=false invertGenotypeFilterExpression=false setFilteredGtToNocall=false filter_reads_with_N_cigar=false filter_mismatching_base_and_quals=false filter_bases_not_stored=false"> ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##reference=file:///PUBLIC/source/HW/Disease/database/genome/human/hg38/bwa_index_whole/hg38.fa ##source=SelectVariants #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT SKAZ004 chr1 17385 . G A 134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.942;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=6.608;MLEAC=1;MLEAF=0.500;MQ=44.14;MQRankSum=0.126;QD=2.64;ReadPosRankSum=-1.900;SOR=0.129 GT:AD:DP:GQ:PL 0/1:41,10:51:99:163,0,1249 chr1 17697 . G C 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.617;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.00;MQRankSum=0.000;QD=2.69;ReadPosRankSum=0.212;SOR=0.069 GT:AD:DP:GQ:PL 0/1:14,3:17:74:74,0,521 chr1 69511 . A G 5845.77 PASS AC=2;AF=1.00;AN=2;DP=196;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.69;QD=29.83;SOR=0.845 GT:AD:DP:GQ:PL 1/1:0,196:196:99:5874,588,0 chr1 120983 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.39;MQRankSum=-0.431;QD=12.44;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,79 chr1 121009 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.47;MQRankSum=-0.431;QD=17.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:57:81,0,57 chr1 183598 . C G 135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.410;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=5.233;MLEAC=1;MLEAF=0.500;MQ=42.99;MQRankSum=-2.440;QD=3.99;ReadPosRankSum=-1.946;SOR=2.331 GT:AD:DP:GQ:PL 0/1:27,7:34:99:164,0,806 chr1 184267 . C T 57.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.605;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=2.932;MLEAC=1;MLEAF=0.500;MQ=42.33;MQRankSum=-0.660;QD=4.81;ReadPosRankSum=-0.183;SOR=1.828 GT:AD:DP:GQ:PL 0/1:9,3:12:86:86,0,305 chr1 187102 . C G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.89;MQRankSum=-0.253;QD=8.80;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:31:81,0,31 chr1 264680 . C T 131.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.344;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.83;MQRankSum=-3.090;QD=8.78;ReadPosRankSum=-0.067;SOR=0.646 GT:AD:DP:GQ:PL 0/1:10,5:15:99:160,0,429 chr1 264681 . A G 131.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.247;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.46;MQRankSum=-2.857;QD=9.41;ReadPosRankSum=0.627;SOR=1.112 GT:AD:DP:GQ:PL 0/1:10,4:14:99:160,0,429 chr1 264718 . C T 65.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.158;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=46.94;MQRankSum=-2.989;QD=5.06;ReadPosRankSum=-0.469;SOR=0.836 GT:AD:DP:GQ:PL 0/1:9,4:13:94:94,0,312 chr1 264730 . T A 139.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.833;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=2.632;MLEAC=1;MLEAF=0.500;MQ=46.85;MQRankSum=-2.429;QD=11.65;ReadPosRankSum=-0.773;SOR=2.303 GT:AD:DP:GQ:PL 0/1:6,6:12:99:168,0,146 chr1 264815 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=43.69;MQRankSum=0.253;QD=9.35;ReadPosRankSum=1.036;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,100 chr1 779968 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 803830 . A G 73.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.03;QD=18.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:101,12,0 chr1 817341 . A G 1495.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.79;SOR=3.109 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1524,129,0 chr1 818045 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.70;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 826893 . G A 5719.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.470;ClippingRankSum=0.000;DP=187;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.74;MQRankSum=-2.186;QD=30.59;ReadPosRankSum=-0.802;SOR=0.892 GT:AD:DP:GQ:PL 1/1:2,185:187:99:5748,510,0 chr1 827209 . G C 1104.10 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.435;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.88;MQRankSum=1.888;QD=30.83;ReadPosRankSum=0.549;SOR=1.542 GT:AD:DP:GQ:PL 1/1:1,27:28:11:1132,11,0 chr1 827212 . C G 1096.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.445;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.55;MQRankSum=1.897;QD=29.67;ReadPosRankSum=0.776;SOR=1.473 GT:AD:DP:GQ:PL 1/1:1,26:27:36:1125,36,0 chr1 827221 . T C 1096.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.504;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.55;MQRankSum=1.897;QD=34.04;ReadPosRankSum=0.842;SOR=1.473 GT:AD:DP:GQ:PL 1/1:1,26:27:36:1125,36,0 chr1 827252 . T A 499.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.06;QD=31.24;SOR=2.049 GT:AD:DP:GQ:PL 1/1:0,16:16:48:528,48,0 chr1 835538 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 841742 . A T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.93;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 847767 . C T 474.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.154;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=1.189;MLEAC=1;MLEAF=0.500;MQ=59.46;MQRankSum=1.399;QD=11.87;ReadPosRankSum=-0.338;SOR=0.914 GT:AD:DP:GQ:PL 0/1:21,19:40:99:503,0,574 chr1 847924 . T C 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.83;QD=32.42;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 856883 . A G 5196.77 PASS AC=2;AF=1.00;AN=2;DP=169;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.65;QD=30.75;SOR=1.739 GT:AD:DP:GQ:PL 1/1:0,169:169:99:5225,507,0 chr1 857100 . C T 4597.77 PASS AC=2;AF=1.00;AN=2;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.62;QD=33.81;SOR=2.007 GT:AD:DP:GQ:PL 1/1:0,136:136:99:4626,409,0 chr1 868735 . G A 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.58;QD=37.76;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 873251 . G A 577.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.99;SOR=2.179 GT:AD:DP:GQ:PL 1/1:0,17:17:51:606,51,0 chr1 873542 . G A 7043.77 PASS AC=2;AF=1.00;AN=2;DP=156;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.28;QD=27.64;SOR=1.379 GT:AD:DP:GQ:PL 1/1:0,156:156:99:7072,485,0 chr1 873548 . C T 7101.77 PASS AC=2;AF=1.00;AN=2;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.54;QD=29.43;SOR=1.222 GT:AD:DP:GQ:PL 1/1:0,161:161:99:7130,488,0 chr1 877371 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 879301 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.56;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 879314 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.56;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 898261 . T C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.59;ReadPosRankSum=-0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:78,0,33 chr1 914618 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 919397 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 924533 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 925308 . G A 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 925398 . A G 176.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.09;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:205,15,0 chr1 925474 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 925628 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 926250 . G A 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.779;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.44;ReadPosRankSum=1.406;SOR=0.527 GT:AD:DP:GQ:PL 0/1:19,10:29:99:331,0,606 chr1 926428 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 929839 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.842;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 930939 . G A 2549.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.11;SOR=1.833 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2578,231,0 chr1 932949 . A C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 933024 . C T 82.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:110,9,0 chr1 933038 . C T 40.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:68,6,0 chr1 933411 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 935523 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 935954 . G T 709.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.093;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=5.507;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.20;ReadPosRankSum=-0.207;SOR=0.186 GT:AD:DP:GQ:PL 0/1:26,24:50:99:738,0,867 chr1 941119 . A G 1125.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.28;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1154,93,0 chr1 942335 . C G 299.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.45;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:328,24,0 chr1 942451 . T C 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.04;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 942934 . G C 2446.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.859;ClippingRankSum=0.000;DP=216;ExcessHet=3.0103;FS=1.049;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.33;ReadPosRankSum=-1.703;SOR=0.778 GT:AD:DP:GQ:PL 0/1:120,96:216:99:2475,0,3139 chr1 944296 . G A 1795.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.82;SOR=3.171 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1824,150,0 chr1 944307 . T C 1564.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.74;SOR=4.565 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1593,123,0 chr1 944858 . A G 3384.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.49;SOR=0.951 GT:AD:DP:GQ:PL 1/1:0,111:111:99:3413,332,0 chr1 946247 . G A 1243.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.425;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=7.015;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=1.447;SOR=0.286 GT:AD:DP:GQ:PL 0/1:46,49:95:99:1272,0,1294 chr1 946653 . G A 2803.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.744;ClippingRankSum=0.000;DP=213;ExcessHet=3.0103;FS=2.578;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.16;ReadPosRankSum=-0.057;SOR=0.898 GT:AD:DP:GQ:PL 0/1:106,107:213:99:2832,0,2929 chr1 946870 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 948245 . A G 3890.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.89;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3919,365,0 chr1 951408 . G A 1756.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.44;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1785,144,0 chr1 951437 . C T 1237.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.28;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1266,96,0 chr1 952180 . A C 10223.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-1.027;ClippingRankSum=0.000;DP=317;ExcessHet=3.0103;FS=3.758;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.35;ReadPosRankSum=-0.703;SOR=0.772 GT:AD:DP:GQ:PL 1/1:1,315:316:99:10252,905,0 chr1 952421 . A G 11355.77 PASS AC=2;AF=1.00;AN=2;DP=321;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.68;SOR=1.182 GT:AD:DP:GQ:PL 1/1:0,321:321:99:11384,963,0 chr1 953259 . T C 23574.77 PASS AC=2;AF=1.00;AN=2;DP=540;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=38.18;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,540:540:99:23603,1642,0 chr1 953279 . T C 23699.77 PASS AC=2;AF=1.00;AN=2;DP=545;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.72;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,545:545:99:23728,1666,0 chr1 953778 . G C 3819.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.94;SOR=1.721 GT:AD:DP:GQ:PL 1/1:0,86:86:99:3848,259,0 chr1 953779 . A C 3819.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.80;SOR=1.721 GT:AD:DP:GQ:PL 1/1:0,86:86:99:3848,259,0 chr1 954258 . G C 1053.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.61;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1082,90,0 chr1 954333 . C A 304.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.11;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:333,24,0 chr1 957365 . G A 1008.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.63;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1037,90,0 chr1 959193 . G A 7994.77 PASS AC=2;AF=1.00;AN=2;DP=222;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.74;SOR=2.434 GT:AD:DP:GQ:PL 1/1:0,222:222:99:8023,667,0 chr1 961096 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 961945 . G C 16366.77 PASS AC=2;AF=1.00;AN=2;DP=518;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.60;SOR=0.905 GT:AD:DP:GQ:PL 1/1:0,518:518:99:16395,1553,0 chr1 962184 . T C 6883.77 PASS AC=2;AF=1.00;AN=2;DP=191;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.155 GT:AD:DP:GQ:PL 1/1:0,191:191:99:6912,572,0 chr1 962943 . T C 4404.77 PASS AC=2;AF=1.00;AN=2;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.41;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,128:128:99:4433,384,0 chr1 964905 . C T 6189.77 PASS AC=2;AF=1.00;AN=2;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.60;SOR=2.973 GT:AD:DP:GQ:PL 1/1:0,136:136:99:6218,418,0 chr1 964906 . A G 6189.77 PASS AC=2;AF=1.00;AN=2;DP=139;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.45;SOR=3.024 GT:AD:DP:GQ:PL 1/1:0,139:139:99:6218,418,0 chr1 965125 . G C 3026.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.014;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=0.512;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=-0.005;SOR=0.760 GT:AD:DP:GQ:PL 0/1:119,112:231:99:3055,0,3288 chr1 965350 . G A 333.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.38;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:30:362,30,0 chr1 966227 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 966272 . A G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.56;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 966728 . C T 3666.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.805;ClippingRankSum=0.000;DP=304;ExcessHet=3.0103;FS=4.565;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=-1.008;SOR=0.496 GT:AD:DP:GQ:PL 0/1:156,148:304:99:3695,0,4219 chr1 973443 . G A 1547.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.768;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=4.304;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.03;ReadPosRankSum=-0.710;SOR=1.191 GT:AD:DP:GQ:PL 0/1:51,52:103:99:1576,0,1476 chr1 973693 . C T 901.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.110;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.46;ReadPosRankSum=-0.325;SOR=0.811 GT:AD:DP:GQ:PL 0/1:37,30:67:99:930,0,1206 chr1 973858 . G C 1053.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.29;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1082,90,0 chr1 973929 . T C 772.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.370;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.31;ReadPosRankSum=-0.461;SOR=0.664 GT:AD:DP:GQ:PL 0/1:26,28:54:99:801,0,651 chr1 974175 . A G 1455.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.98;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1484,114,0 chr1 974388 . A G 5913.77 PASS AC=2;AF=1.00;AN=2;DP=184;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.14;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,184:184:99:5942,552,0 chr1 976215 . A G 2156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.186;ClippingRankSum=0.000;DP=182;ExcessHet=3.0103;FS=2.571;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.92;ReadPosRankSum=0.539;SOR=0.737 GT:AD:DP:GQ:PL 0/1:92,89:181:99:2185,0,2413 chr1 976536 . C T 4750.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.257;ClippingRankSum=0.000;DP=358;ExcessHet=3.0103;FS=5.385;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.38;ReadPosRankSum=0.454;SOR=0.923 GT:AD:DP:GQ:PL 0/1:171,184:355:99:4779,0,4341 chr1 976778 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.03;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 978230 . G A 96.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:125,15,0 chr1 978812 . G C 1394.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.44;SOR=1.312 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1423,129,0 chr1 978953 . C G 1237.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.299;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=1.810;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.28;ReadPosRankSum=1.882;SOR=0.929 GT:AD:DP:GQ:PL 0/1:36,45:81:99:1266,0,955 chr1 979459 . C T 1626.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.212;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.64;ReadPosRankSum=-1.682;SOR=0.779 GT:AD:DP:GQ:PL 0/1:52,52:104:99:1655,0,1461 chr1 979472 . G C 1210.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.985;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=2.950;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.08;ReadPosRankSum=-1.357;SOR=0.432 GT:AD:DP:GQ:PL 0/1:46,40:86:99:1239,0,1390 chr1 979496 . T C 3212.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.55;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,93:93:99:3241,279,0 chr1 979560 . T C 1292.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.330;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.55;ReadPosRankSum=-0.196;SOR=0.761 GT:AD:DP:GQ:PL 0/1:55,48:103:99:1321,0,1516 chr1 979847 . A G 15585.77 PASS AC=2;AF=1.00;AN=2;DP=466;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.52;SOR=0.926 GT:AD:DP:GQ:PL 1/1:0,465:465:99:15614,1396,0 chr1 981169 . A G 3040.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.79;SOR=2.200 GT:AD:DP:GQ:PL 1/1:0,90:90:99:3069,269,0 chr1 981282 . A C 218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.623;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=-1.267;SOR=0.582 GT:AD:DP:GQ:PL 0/1:8,7:15:99:247,0,277 chr1 981935 . G A 267.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.386;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.64;ReadPosRankSum=0.529;SOR=0.818 GT:AD:DP:GQ:PL 0/1:11,12:23:99:296,0,322 chr1 982112 . C T 833.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.006;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=1.928;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.83;ReadPosRankSum=0.530;SOR=0.495 GT:AD:DP:GQ:PL 0/1:44,33:77:99:862,0,1232 chr1 984039 . T C 194.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:223,18,0 chr1 984121 . G T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-0.674;SOR=0.991 GT:AD:DP:GQ:PL 0/1:3,3:6:73:107,0,73 chr1 991241 . A C 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr1 993936 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.27;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 993941 . A C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.44;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 993947 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.41;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 999842 . C A 884.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.570;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.966;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.79;ReadPosRankSum=-0.204;SOR=0.859 GT:AD:DP:GQ:PL 0/1:48,34:82:99:913,0,1483 chr1 1008088 . T C 222.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.85;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:251,24,0 chr1 1008307 . G C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.674;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 1013312 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 1013490 . C G 4735.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.41;SOR=1.736 GT:AD:DP:GQ:PL 1/1:0,115:115:99:4764,349,0 chr1 1013541 . T C 5840.77 PASS AC=2;AF=1.00;AN=2;DP=173;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=1.316 GT:AD:DP:GQ:PL 1/1:0,173:173:99:5869,519,0 chr1 1013855 . G A 3643.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.25;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,90:90:99:3672,271,0 chr1 1014228 . G A 4580.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.793;ClippingRankSum=0.000;DP=328;ExcessHet=3.0103;FS=3.576;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.97;ReadPosRankSum=-0.263;SOR=0.522 GT:AD:DP:GQ:PL 0/1:168,160:328:99:4609,0,5028 chr1 1014274 . A G 10646.77 PASS AC=2;AF=1.00;AN=2;DP=319;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.38;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,319:319:99:10675,957,0 chr1 1014545 . C T 1506.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.48;SOR=2.461 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1535,134,0 chr1 1015336 . A T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 1020217 . G T 485.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.581;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.57;ReadPosRankSum=-0.436;SOR=1.387 GT:AD:DP:GQ:PL 0/1:3,16:19:34:514,0,34 chr1 1022518 . G T 1036.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.384;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=7.434;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.82;ReadPosRankSum=0.000;SOR=0.152 GT:AD:DP:GQ:PL 0/1:39,36:75:99:1065,0,1260 chr1 1023351 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1034835 . G C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 1035987 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1037997 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 1038078 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 1038975 . G A 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 1038976 . T C 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 1039190 . T G 65.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:93,9,0 chr1 1039282 . G T 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 1039753 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1041134 . C A 597.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.04;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:626,45,0 chr1 1041950 . T C 3321.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.97;SOR=2.044 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3350,285,0 chr1 1042190 . G A 4441.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.20;SOR=3.113 GT:AD:DP:GQ:PL 1/1:0,122:122:99:4470,367,0 chr1 1045080 . G A 1330.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.11;SOR=1.949 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1359,108,0 chr1 1045707 . A G 9413.77 PASS AC=2;AF=1.00;AN=2;DP=259;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.23;SOR=1.039 GT:AD:DP:GQ:PL 1/1:0,259:259:99:9442,778,0 chr1 1046551 . A G 5730.77 PASS AC=2;AF=1.00;AN=2;DP=167;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.32;SOR=1.132 GT:AD:DP:GQ:PL 1/1:0,167:167:99:5759,498,0 chr1 1047064 . A G 614.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:643,48,0 chr1 1047082 . T C 465.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.53;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:494,36,0 chr1 1047133 . T C 201.81 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=28.83;ReadPosRankSum=1.465;SOR=0.527 GT:AD:DP:GQ:PL 0/1:1,6:7:20:230,0,20 chr1 1047561 . T C 15940.77 PASS AC=2;AF=1.00;AN=2;DP=489;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.67;SOR=0.980 GT:AD:DP:GQ:PL 1/1:0,488:488:99:15969,1463,0 chr1 1047614 . T C 14629.77 PASS AC=2;AF=1.00;AN=2;DP=432;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.87;SOR=1.083 GT:AD:DP:GQ:PL 1/1:0,432:432:99:14658,1297,0 chr1 1048922 . T C 1171.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.58;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1200,123,0 chr1 1049886 . C T 4866.77 PASS AC=2;AF=1.00;AN=2;DP=148;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.88;SOR=1.067 GT:AD:DP:GQ:PL 1/1:0,148:148:99:4895,444,0 chr1 1050066 . G T 1159.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=0.889;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=26.06;ReadPosRankSum=1.629;SOR=0.275 GT:AD:DP:GQ:PL 1/1:1,32:33:91:1188,91,0 chr1 1050069 . G A 1119.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.288;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=3.136;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.99;ReadPosRankSum=1.601;SOR=0.209 GT:AD:DP:GQ:PL 1/1:2,33:35:84:1148,84,0 chr1 1051063 . C T 3502.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.36;SOR=1.458 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3531,313,0 chr1 1051820 . C T 7291.77 PASS AC=2;AF=1.00;AN=2;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.07;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,214:214:99:7320,641,0 chr1 1052290 . T G 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr1 1053123 . A T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 1053552 . G C 2024.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.75;SOR=1.571 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2053,180,0 chr1 1054900 . C T 967.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.24;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:96:996,96,0 chr1 1055137 . C T 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 1055393 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 1055426 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 1055604 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 1059011 . G T 168.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.14;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:197,18,0 chr1 1062028 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 1067054 . C T 31.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0 chr1 1067673 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1070689 . G A 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=-0.566;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,4:7:70:112,0,70 chr1 1071610 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 1071823 . A G 4545.77 PASS AC=2;AF=1.00;AN=2;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.59;SOR=5.119 GT:AD:DP:GQ:PL 1/1:0,123:123:99:4574,369,0 chr1 1072052 . G A 8642.77 PASS AC=2;AF=1.00;AN=2;DP=250;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.71;SOR=1.841 GT:AD:DP:GQ:PL 1/1:0,249:249:99:8671,745,0 chr1 1072326 . G A 2407.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.311;ClippingRankSum=0.000;DP=172;ExcessHet=3.0103;FS=1.210;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.00;ReadPosRankSum=-2.577;SOR=0.843 GT:AD:DP:GQ:PL 0/1:86,86:172:99:2436,0,2297 chr1 1079456 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.08;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 1079484 . T A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.18;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 1080437 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 1082764 . T C 2174.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.40;SOR=1.316 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2203,177,0 chr1 1083182 . C T 969.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.29;SOR=5.058 GT:AD:DP:GQ:PL 1/1:0,25:25:75:998,75,0 chr1 1083795 . C G 6467.77 PASS AC=2;AF=1.00;AN=2;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.66;SOR=1.497 GT:AD:DP:GQ:PL 1/1:0,144:144:99:6496,442,0 chr1 1083800 . T C 6454.77 PASS AC=2;AF=1.00;AN=2;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.48;SOR=1.406 GT:AD:DP:GQ:PL 1/1:0,144:144:99:6483,439,0 chr1 1085026 . T C 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.06;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 1086035 . A G 5120.77 PASS AC=2;AF=1.00;AN=2;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.53;SOR=2.403 GT:AD:DP:GQ:PL 1/1:0,144:144:99:5149,432,0 chr1 1088064 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 1089921 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 1091327 . C A 5356.77 PASS AC=2;AF=1.00;AN=2;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.48;SOR=1.795 GT:AD:DP:GQ:PL 1/1:0,160:160:99:5385,480,0 chr1 1091421 . T A 8936.77 PASS AC=2;AF=1.00;AN=2;DP=285;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,284:284:99:8965,852,0 chr1 1127664 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 1127861 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1129422 . T C 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr1 1130879 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 1130902 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 1131023 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 1135061 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1135812 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1142582 . C T 560.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:589,45,0 chr1 1159599 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 1161528 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 1161712 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.31;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 1161720 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.30;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 1161907 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 1161955 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 1163334 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1163962 . A C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 1164939 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 1168162 . T C 681.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.50;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:710,51,0 chr1 1173774 . G A 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr1 1173872 . A G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 1174096 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1179830 . G A 568.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.240;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=12.273;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.87;ReadPosRankSum=0.567;SOR=3.142 GT:AD:DP:GQ:PL 0/1:25,16:41:99:597,0,1769 chr1 1179833 . G T 568.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.649;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=12.273;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.87;ReadPosRankSum=-0.049;SOR=3.142 GT:AD:DP:GQ:PL 0/1:25,16:41:99:597,0,1769 chr1 1180931 . A G 212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.501;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.34;ReadPosRankSum=0.586;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:70:241,0,70 chr1 1181173 . C G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 1182018 . A G 1031.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.180;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=3.102;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.64;ReadPosRankSum=-1.728;SOR=0.255 GT:AD:DP:GQ:PL 0/1:28,34:62:99:1060,0,949 chr1 1182832 . T C 2590.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.375;ClippingRankSum=0.000;DP=183;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.16;ReadPosRankSum=2.198;SOR=0.734 GT:AD:DP:GQ:PL 0/1:87,96:183:99:2619,0,2355 chr1 1184277 . G C 732.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.302;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=6.152;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.04;ReadPosRankSum=-1.480;SOR=0.073 GT:AD:DP:GQ:PL 0/1:19,24:43:99:761,0,664 chr1 1184927 . G A 2931.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.860;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=0.568;MLEAC=1;MLEAF=0.500;MQ=58.34;MQRankSum=-0.638;QD=14.44;ReadPosRankSum=-0.296;SOR=0.751 GT:AD:DP:GQ:PL 0/1:96,107:203:99:2960,0,2731 chr1 1185634 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 1197405 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.150;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.15;ReadPosRankSum=1.855;SOR=2.494 GT:AD:DP:GQ:PL 0/1:9,3:12:78:78,0,235 chr1 1197558 . G A 1126.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.330;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=0.783;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.38;ReadPosRankSum=-0.965;SOR=0.807 GT:AD:DP:GQ:PL 0/1:43,48:91:99:1155,0,1021 chr1 1197586 . C A 1060.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.451;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=1.838;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=0.674;SOR=0.829 GT:AD:DP:GQ:PL 0/1:40,40:80:99:1089,0,1099 chr1 1197697 . A G 747.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.577;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=1.142;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.26;ReadPosRankSum=-0.025;SOR=0.498 GT:AD:DP:GQ:PL 0/1:21,25:46:99:776,0,625 chr1 1197874 . G A 715.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.432;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=1.987;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.68;ReadPosRankSum=0.087;SOR=0.223 GT:AD:DP:GQ:PL 0/1:10,19:29:99:744,0,680 chr1 1197893 . T C 649.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.081;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.41;ReadPosRankSum=-0.054;SOR=0.459 GT:AD:DP:GQ:PL 0/1:12,17:29:99:678,0,729 chr1 1199327 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 1212042 . C T 1571.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.210;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.31;ReadPosRankSum=0.800;SOR=0.678 GT:AD:DP:GQ:PL 0/1:74,65:139:99:1600,0,1891 chr1 1213441 . G A 826.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.601;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.954;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.92;ReadPosRankSum=-0.152;SOR=0.721 GT:AD:DP:GQ:PL 0/1:32,32:64:99:855,0,889 chr1 1220403 . C T 131.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.711;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.98;ReadPosRankSum=-0.754;SOR=1.371 GT:AD:DP:GQ:PL 0/1:7,5:12:99:160,0,222 chr1 1220424 . T C 306.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.039;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.17;ReadPosRankSum=-1.121;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,10:16:99:335,0,202 chr1 1220751 . T C 6953.77 PASS AC=2;AF=1.00;AN=2;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.75;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,219:219:99:6982,657,0 chr1 1223251 . A G 4380.77 PASS AC=2;AF=1.00;AN=2;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.96;SOR=1.646 GT:AD:DP:GQ:PL 1/1:0,129:129:99:4409,387,0 chr1 1224137 . T C 1051.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.47;SOR=6.593 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1080,78,0 chr1 1224160 . G A 404.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.24;ReadPosRankSum=0.324;SOR=1.127 GT:AD:DP:GQ:PL 0/1:8,12:20:99:433,0,269 chr1 1228424 . C T 2401.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.231;ClippingRankSum=0.000;DP=202;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.89;ReadPosRankSum=1.951;SOR=0.685 GT:AD:DP:GQ:PL 0/1:107,95:202:99:2430,0,2982 chr1 1229930 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr1 1255305 . G A 2363.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.553;ClippingRankSum=0.000;DP=209;ExcessHet=3.0103;FS=1.782;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.36;ReadPosRankSum=-1.170;SOR=0.851 GT:AD:DP:GQ:PL 0/1:113,95:208:99:2392,0,3198 chr1 1256271 . A G 119.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.241;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.31;ReadPosRankSum=-0.712;SOR=0.941 GT:AD:DP:GQ:PL 0/1:4,5:9:99:148,0,106 chr1 1260503 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1290099 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=56.62;MQRankSum=0.674;QD=10.94;ReadPosRankSum=-1.383;SOR=2.209 GT:AD:DP:GQ:PL 0/1:2,2:4:58:72,0,58 chr1 1290204 . G A 832.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.425;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=2.605;MLEAC=1;MLEAF=0.500;MQ=59.42;MQRankSum=-1.101;QD=16.01;ReadPosRankSum=0.766;SOR=0.387 GT:AD:DP:GQ:PL 0/1:20,32:52:99:861,0,787 chr1 1290232 . G A 1160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.325;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=3.316;MLEAC=1;MLEAF=0.500;MQ=59.77;MQRankSum=0.838;QD=14.88;ReadPosRankSum=0.412;SOR=1.101 GT:AD:DP:GQ:PL 0/1:47,31:78:99:1189,0,1875 chr1 1290261 . C A 1359.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.899;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=1.723;MLEAC=1;MLEAF=0.500;MQ=59.91;MQRankSum=0.887;QD=13.88;ReadPosRankSum=0.611;SOR=0.961 GT:AD:DP:GQ:PL 0/1:56,42:98:99:1388,0,2074 chr1 1290579 . C G 1927.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.826;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=0.554;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.77;ReadPosRankSum=0.236;SOR=0.639 GT:AD:DP:GQ:PL 0/1:105,74:179:99:1956,0,2882 chr1 1290722 . G A 1300.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.154;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=3.407;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.84;ReadPosRankSum=0.126;SOR=0.450 GT:AD:DP:GQ:PL 0/1:69,51:120:99:1329,0,1806 chr1 1290841 . A G 748.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.177;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=0.995;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.37;ReadPosRankSum=-0.586;SOR=0.846 GT:AD:DP:GQ:PL 0/1:30,26:56:99:777,0,778 chr1 1290968 . C G 1409.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.145;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=9.134;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.59;ReadPosRankSum=1.458;SOR=0.816 GT:AD:DP:GQ:PL 0/1:33,52:85:99:1438,0,816 chr1 1294300 . G T 9272.77 PASS AC=2;AF=1.00;AN=2;DP=280;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.12;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,280:280:99:9301,839,0 chr1 1297952 . C T 2427.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.600;ClippingRankSum=0.000;DP=221;ExcessHet=3.0103;FS=1.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.99;ReadPosRankSum=0.038;SOR=0.814 GT:AD:DP:GQ:PL 0/1:128,93:221:99:2456,0,3544 chr1 1298789 . G A 1563.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.541;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=1.964;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.33;ReadPosRankSum=-1.158;SOR=1.057 GT:AD:DP:GQ:PL 0/1:51,51:102:99:1592,0,1389 chr1 1302224 . T C 655.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.15;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,18:18:54:684,54,0 chr1 1303203 . G A 1455.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.053;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=1.669;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.65;ReadPosRankSum=-1.107;SOR=0.885 GT:AD:DP:GQ:PL 0/1:41,52:93:99:1484,0,1026 chr1 1303959 . T G 2148.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.11;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2177,189,0 chr1 1304573 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1306420 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 1306835 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 1307327 . A G 6223.77 PASS AC=2;AF=1.00;AN=2;DP=186;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.46;SOR=1.559 GT:AD:DP:GQ:PL 1/1:0,186:186:99:6252,557,0 chr1 1307603 . G A 301.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.10;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:330,24,0 chr1 1309988 . G A 1030.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.475;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=2.535;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.56;ReadPosRankSum=-0.442;SOR=1.151 GT:AD:DP:GQ:PL 0/1:42,34:76:99:1059,0,1195 chr1 1310624 . A G 7365.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.922;ClippingRankSum=0.000;DP=228;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.45;ReadPosRankSum=0.795;SOR=0.269 GT:AD:DP:GQ:PL 1/1:1,226:227:99:7394,667,0 chr1 1311010 . C G 2567.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.048;ClippingRankSum=0.000;DP=249;ExcessHet=3.0103;FS=2.222;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.40;ReadPosRankSum=0.735;SOR=0.842 GT:AD:DP:GQ:PL 0/1:150,97:247:99:2596,0,4288 chr1 1312114 . T C 1031.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.976;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.58;ReadPosRankSum=1.031;SOR=0.666 GT:AD:DP:GQ:PL 0/1:45,37:82:99:1060,0,1449 chr1 1313807 . G A 9868.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.706;ClippingRankSum=0.000;DP=683;ExcessHet=3.0103;FS=1.754;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.45;ReadPosRankSum=-0.006;SOR=0.550 GT:AD:DP:GQ:PL 0/1:315,368:683:99:9897,0,8505 chr1 1318756 . G A 1500.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.36;SOR=2.531 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1529,126,0 chr1 1318951 . C A 1807.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.126;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=2.161;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=-0.707;SOR=0.910 GT:AD:DP:GQ:PL 0/1:64,74:138:99:1836,0,1675 chr1 1319056 . A G 5767.77 PASS AC=2;AF=1.00;AN=2;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.16;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,130:130:99:5796,394,0 chr1 1319063 . G A 5834.77 PASS AC=2;AF=1.00;AN=2;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.95;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,129:129:99:5863,397,0 chr1 1319461 . C G 5612.77 PASS AC=2;AF=1.00;AN=2;DP=172;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.63;SOR=1.694 GT:AD:DP:GQ:PL 1/1:0,172:172:99:5641,516,0 chr1 1322213 . A G 1057.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.41;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1086,78,0 chr1 1322866 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1324788 . C A 227.88 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.799;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=6.818;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=18.99;ReadPosRankSum=2.744;SOR=0.039 GT:AD:DP:GQ:PL 1/1:4,8:12:16:256,16,0 chr1 1327211 . C T 5873.77 PASS AC=2;AF=1.00;AN=2;DP=175;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.56;SOR=1.379 GT:AD:DP:GQ:PL 1/1:0,175:175:99:5902,526,0 chr1 1327586 . C T 5174.77 PASS AC=2;AF=1.00;AN=2;DP=164;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.55;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,164:164:99:5203,492,0 chr1 1327764 . G A 2676.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.64;SOR=1.788 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2705,246,0 chr1 1327982 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 1331096 . A G 205.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.72;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:234,24,0 chr1 1333467 . T G 8938.77 PASS AC=2;AF=1.00;AN=2;DP=273;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.74;SOR=0.841 GT:AD:DP:GQ:PL 1/1:0,273:273:99:8967,819,0 chr1 1334174 . T C 3078.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.07;SOR=1.190 GT:AD:DP:GQ:PL 1/1:0,96:96:99:3107,288,0 chr1 1334669 . T G 240.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.352;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.52;ReadPosRankSum=0.869;SOR=0.250 GT:AD:DP:GQ:PL 0/1:4,9:13:99:269,0,125 chr1 1336560 . C T 87.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.911;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.16;ReadPosRankSum=-0.572;SOR=0.941 GT:AD:DP:GQ:PL 0/1:13,4:17:99:116,0,458 chr1 1337736 . A G 2423.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.68;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2452,237,0 chr1 1337898 . A G 503.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.49;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:532,48,0 chr1 1338862 . A G 644.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.57;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:673,51,0 chr1 1338970 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 1340697 . G A 148.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.180;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.53;ReadPosRankSum=0.480;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,6:9:98:177,0,98 chr1 1341079 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 1341098 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 1341432 . G A 565.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.14;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:594,45,0 chr1 1342153 . T C 5418.77 PASS AC=2;AF=1.00;AN=2;DP=167;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.45;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,167:167:99:5447,500,0 chr1 1342453 . G A 1870.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.451;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.41;ReadPosRankSum=-1.570;SOR=0.632 GT:AD:DP:GQ:PL 0/1:42,72:114:99:1899,0,1072 chr1 1342857 . T C 4612.77 PASS AC=2;AF=1.00;AN=2;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.94;QD=34.68;SOR=2.506 GT:AD:DP:GQ:PL 1/1:0,133:133:99:4641,398,0 chr1 1344634 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 1349110 . G A 1544.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.76;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1573,129,0 chr1 1352965 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 1353091 . C T 1682.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.09;SOR=4.271 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1711,135,0 chr1 1353203 . C G 6484.77 PASS AC=2;AF=1.00;AN=2;DP=187;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.68;SOR=1.727 GT:AD:DP:GQ:PL 1/1:0,187:187:99:6513,561,0 chr1 1353443 . A G 4070.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.97;SOR=1.036 GT:AD:DP:GQ:PL 1/1:0,106:106:99:4099,319,0 chr1 1354531 . G A 3424.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.33;SOR=2.454 GT:AD:DP:GQ:PL 1/1:0,96:96:99:3453,288,0 chr1 1356602 . A C 31.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.97;ReadPosRankSum=-0.854;SOR=2.303 GT:AD:DP:GQ:PL 0/1:6,2:8:60:60,0,156 chr1 1356747 . A C 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.485;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=16.320;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.38;ReadPosRankSum=1.485;SOR=4.172 GT:AD:DP:GQ:PL 0/1:21,7:28:99:179,0,748 chr1 1356751 . A C 152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.442;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=16.660;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.66;ReadPosRankSum=1.795;SOR=4.170 GT:AD:DP:GQ:PL 0/1:20,7:27:99:181,0,741 chr1 1356752 . G C 152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.594;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=16.660;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.66;ReadPosRankSum=1.795;SOR=4.170 GT:AD:DP:GQ:PL 0/1:20,7:27:99:181,0,741 chr1 1356757 . G C 146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.499;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=19.859;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.24;ReadPosRankSum=1.745;SOR=4.168 GT:AD:DP:GQ:PL 0/1:21,7:28:99:175,0,800 chr1 1357046 . C G 343.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.38;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:30:372,30,0 chr1 1358384 . G C 2126.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.091;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=1.044;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.13;ReadPosRankSum=-0.068;SOR=0.793 GT:AD:DP:GQ:PL 0/1:144,89:233:99:2155,0,3978 chr1 1358907 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 1359548 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 1361231 . G C 5125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.167;ClippingRankSum=0.000;DP=407;ExcessHet=3.0103;FS=1.101;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.59;ReadPosRankSum=1.889;SOR=0.580 GT:AD:DP:GQ:PL 0/1:211,196:407:99:5154,0,5456 chr1 1361311 . C G 10336.77 PASS AC=2;AF=1.00;AN=2;DP=329;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.42;SOR=1.313 GT:AD:DP:GQ:PL 1/1:0,329:329:99:10365,987,0 chr1 1361438 . C G 2281.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.52;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2310,174,0 chr1 1371178 . T C 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 1373602 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 1373805 . T C 4012.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.312;ClippingRankSum=0.000;DP=265;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.94;MQRankSum=-0.888;QD=15.14;ReadPosRankSum=0.797;SOR=0.667 GT:AD:DP:GQ:PL 0/1:118,147:265:99:4041,0,3286 chr1 1374694 . C G 1490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.759;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=1.475;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.74;ReadPosRankSum=0.362;SOR=0.849 GT:AD:DP:GQ:PL 0/1:56,61:117:99:1519,0,1443 chr1 1374801 . A G 1071.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.086;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=3.692;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.74;ReadPosRankSum=1.489;SOR=0.391 GT:AD:DP:GQ:PL 0/1:66,44:110:99:1100,0,1656 chr1 1376054 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1387698 . A G 1396.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.647;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=1.671;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.69;ReadPosRankSum=-2.636;SOR=0.536 GT:AD:DP:GQ:PL 0/1:54,48:102:99:1425,0,1711 chr1 1388248 . C A 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=0.431;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,148 chr1 1390134 . T A 318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.627;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=1.576;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.81;ReadPosRankSum=0.588;SOR=1.051 GT:AD:DP:GQ:PL 0/1:15,12:27:99:347,0,455 chr1 1395346 . A G 1067.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.372;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=5.953;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.18;ReadPosRankSum=-0.297;SOR=1.349 GT:AD:DP:GQ:PL 0/1:39,42:81:99:1096,0,909 chr1 1398056 . C A 712.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.76;ReadPosRankSum=-0.178;SOR=1.536 GT:AD:DP:GQ:PL 0/1:10,20:30:99:741,0,327 chr1 1399922 . C T 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=-0.272;SOR=1.270 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr1 1400410 . A G 1686.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.673;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=0.732;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.06;ReadPosRankSum=-0.641;SOR=0.574 GT:AD:DP:GQ:PL 0/1:49,56:105:99:1715,0,1520 chr1 1402457 . A G 201.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.385;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.18;ReadPosRankSum=0.210;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,7:10:96:230,0,96 chr1 1405805 . A G 2794.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.955;ClippingRankSum=0.000;DP=254;ExcessHet=3.0103;FS=0.459;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.05;ReadPosRankSum=0.619;SOR=0.731 GT:AD:DP:GQ:PL 0/1:140,113:253:99:2823,0,3820 chr1 1419135 . C G 1798.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.421;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=0.669;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.67;ReadPosRankSum=-0.078;SOR=0.599 GT:AD:DP:GQ:PL 0/1:75,67:142:99:1827,0,2038 chr1 1419214 . A G 2709.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.003;ClippingRankSum=0.000;DP=228;ExcessHet=3.0103;FS=3.789;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.88;ReadPosRankSum=-0.479;SOR=0.474 GT:AD:DP:GQ:PL 0/1:127,101:228:99:2738,0,3506 chr1 1420203 . C A 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-1.068;SOR=2.258 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr1 1425936 . G A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 1426175 . T C 296.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.426;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.13;ReadPosRankSum=-1.007;SOR=0.859 GT:AD:DP:GQ:PL 0/1:10,11:21:99:325,0,308 chr1 1426261 . C T 204.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.856;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=1.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.75;ReadPosRankSum=0.525;SOR=1.162 GT:AD:DP:GQ:PL 0/1:12,9:21:99:233,0,302 chr1 1428004 . G C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,139 chr1 1428015 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,139 chr1 1436079 . A G 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=-0.253;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr1 1439454 . A G 763.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.656;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.93;ReadPosRankSum=1.154;SOR=0.843 GT:AD:DP:GQ:PL 0/1:38,26:64:99:792,0,1274 chr1 1451787 . A C 64.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.589;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.94;ReadPosRankSum=-0.939;SOR=0.067 GT:AD:DP:GQ:PL 0/1:18,4:22:93:93,0,646 chr1 1451968 . C T 3030.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.175;ClippingRankSum=0.000;DP=255;ExcessHet=3.0103;FS=5.477;MLEAC=1;MLEAF=0.500;MQ=59.97;MQRankSum=0.000;QD=11.93;ReadPosRankSum=-0.205;SOR=1.048 GT:AD:DP:GQ:PL 0/1:141,113:254:99:3059,0,4039 chr1 1452346 . A G 2732.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.876;ClippingRankSum=0.000;DP=224;ExcessHet=3.0103;FS=1.028;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.20;ReadPosRankSum=0.859;SOR=0.701 GT:AD:DP:GQ:PL 0/1:115,109:224:99:2761,0,3175 chr1 1452384 . G A 2474.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.202;ClippingRankSum=0.000;DP=208;ExcessHet=3.0103;FS=1.073;MLEAC=1;MLEAF=0.500;MQ=59.85;MQRankSum=-2.214;QD=11.90;ReadPosRankSum=0.399;SOR=0.608 GT:AD:DP:GQ:PL 0/1:114,94:208:99:2503,0,3030 chr1 1452511 . A G 1175.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.455;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.63;MQRankSum=-2.025;QD=14.34;ReadPosRankSum=2.539;SOR=0.851 GT:AD:DP:GQ:PL 0/1:41,41:82:99:1204,0,1227 chr1 1452540 . G A 864.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.584;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=3.407;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.96;ReadPosRankSum=0.126;SOR=0.296 GT:AD:DP:GQ:PL 0/1:20,31:51:99:893,0,648 chr1 1454315 . C T 704.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.536;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.92;MQRankSum=2.640;QD=11.19;ReadPosRankSum=-2.675;SOR=0.825 GT:AD:DP:GQ:PL 0/1:39,24:63:99:733,0,1255 chr1 1454506 . G A 2316.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.447;ClippingRankSum=0.000;DP=194;ExcessHet=3.0103;FS=1.116;MLEAC=1;MLEAF=0.500;MQ=59.76;MQRankSum=-2.404;QD=11.94;ReadPosRankSum=-0.366;SOR=0.595 GT:AD:DP:GQ:PL 0/1:102,92:194:99:2345,0,2627 chr1 1454770 . T C 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.57;MQRankSum=-1.465;QD=22.82;ReadPosRankSum=-1.068;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr1 1455337 . A G 1884.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.462;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=0.708;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.58;ReadPosRankSum=-0.779;SOR=0.777 GT:AD:DP:GQ:PL 0/1:46,75:121:99:1913,0,1026 chr1 1455495 . C T 1785.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.259;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.26;MQRankSum=0.370;QD=15.66;ReadPosRankSum=-0.576;SOR=0.750 GT:AD:DP:GQ:PL 0/1:49,65:114:99:1814,0,1296 chr1 1455617 . T G 1698.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.098;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=6.437;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.73;ReadPosRankSum=-0.229;SOR=0.307 GT:AD:DP:GQ:PL 0/1:49,59:108:99:1727,0,1517 chr1 1455924 . T C 2336.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.597;ClippingRankSum=0.000;DP=182;ExcessHet=3.0103;FS=4.634;MLEAC=1;MLEAF=0.500;MQ=58.57;MQRankSum=-3.968;QD=12.84;ReadPosRankSum=-0.998;SOR=1.071 GT:AD:DP:GQ:PL 0/1:96,86:182:99:2365,0,2507 chr1 1456051 . C T 299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.710;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=18.939;MLEAC=1;MLEAF=0.500;MQ=41.13;MQRankSum=-1.679;QD=8.10;ReadPosRankSum=0.447;SOR=2.435 GT:AD:DP:GQ:PL 0/1:26,11:37:99:328,0,949 chr1 1456079 . T C 338.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.767;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=9.424;MLEAC=1;MLEAF=0.500;MQ=40.86;MQRankSum=-3.108;QD=6.91;ReadPosRankSum=-1.096;SOR=0.829 GT:AD:DP:GQ:PL 0/1:34,15:49:99:367,0,1139 chr1 1457033 . A C 500.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.069;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=1.676;MLEAC=1;MLEAF=0.500;MQ=59.83;MQRankSum=-3.159;QD=12.52;ReadPosRankSum=-0.599;SOR=0.307 GT:AD:DP:GQ:PL 0/1:22,18:40:99:529,0,731 chr1 1457059 . A G 856.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.416;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=1.393;MLEAC=1;MLEAF=0.500;MQ=59.87;MQRankSum=-3.295;QD=15.58;ReadPosRankSum=-0.009;SOR=0.379 GT:AD:DP:GQ:PL 0/1:32,23:55:99:885,0,1980 chr1 1457060 . T C 856.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.805;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=2.780;MLEAC=1;MLEAF=0.500;MQ=59.88;MQRankSum=-3.315;QD=14.77;ReadPosRankSum=0.249;SOR=0.357 GT:AD:DP:GQ:PL 0/1:34,24:58:99:885,0,1980 chr1 1457071 . C T 919.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.171;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=1.095;MLEAC=1;MLEAF=0.500;MQ=59.91;MQRankSum=-3.103;QD=12.26;ReadPosRankSum=-1.081;SOR=0.439 GT:AD:DP:GQ:PL 0/1:42,33:75:99:948,0,1358 chr1 1457342 . A C 509.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.634;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=3.153;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.93;ReadPosRankSum=1.354;SOR=0.083 GT:AD:DP:GQ:PL 0/1:16,16:32:99:538,0,553 chr1 1459247 . G A 1817.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.527;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=0.585;MLEAC=1;MLEAF=0.500;MQ=43.03;MQRankSum=0.200;QD=11.43;ReadPosRankSum=0.547;SOR=0.636 GT:AD:DP:GQ:PL 0/1:82,77:159:99:1846,0,2113 chr1 1460603 . T C 433.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=3.174;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.07;ReadPosRankSum=1.364;SOR=0.172 GT:AD:DP:GQ:PL 0/1:14,13:27:99:462,0,503 chr1 1468856 . C T 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.75;MQRankSum=-0.243;QD=17.29;ReadPosRankSum=-0.615;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,7:13:99:253,0,211 chr1 1471785 . C T 265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.253;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.61;ReadPosRankSum=0.438;SOR=0.976 GT:AD:DP:GQ:PL 0/1:7,9:16:99:294,0,210 chr1 1471992 . T C 125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.58;MQRankSum=-1.981;QD=17.97;ReadPosRankSum=1.180;SOR=0.527 GT:AD:DP:GQ:PL 0/1:2,5:7:62:154,0,62 chr1 1472158 . C G 409.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.910;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=4.102;MLEAC=1;MLEAF=0.500;MQ=46.74;MQRankSum=-3.681;QD=22.76;ReadPosRankSum=0.972;SOR=2.546 GT:AD:DP:GQ:PL 0/1:7,11:18:99:438,0,501 chr1 1472174 . T C 580.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.293;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=6.794;MLEAC=1;MLEAF=0.500;MQ=49.86;MQRankSum=-4.947;QD=19.36;ReadPosRankSum=1.010;SOR=2.797 GT:AD:DP:GQ:PL 0/1:14,16:30:99:609,0,684 chr1 1472360 . G A 684.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.351;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=1.317;MLEAC=1;MLEAF=0.500;MQ=43.54;MQRankSum=-1.209;QD=15.56;ReadPosRankSum=-1.560;SOR=0.465 GT:AD:DP:GQ:PL 0/1:16,28:44:99:713,0,424 chr1 1477970 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 1477985 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 1477987 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 1478504 . A G 387.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.716;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.52;MQRankSum=-4.056;QD=7.32;ReadPosRankSum=0.849;SOR=0.793 GT:AD:DP:GQ:PL 0/1:40,13:53:99:416,0,2479 chr1 1478519 . A G 333.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.756;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=3.168;MLEAC=1;MLEAF=0.500;MQ=58.68;MQRankSum=-4.561;QD=5.66;ReadPosRankSum=-2.108;SOR=1.286 GT:AD:DP:GQ:PL 0/1:47,12:59:99:362,0,2621 chr1 1479205 . A C 226.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.576;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.97;MQRankSum=-4.582;QD=2.20;ReadPosRankSum=-1.866;SOR=0.743 GT:AD:DP:GQ:PL 0/1:85,18:103:99:255,0,2148 chr1 1479334 . A G 248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.37;MQRankSum=-4.152;QD=12.44;ReadPosRankSum=-0.874;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,10:20:99:277,0,358 chr1 1481959 . C T 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=1.224;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:218,0,176 chr1 1482316 . C G 616.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.188;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=1.980;MLEAC=1;MLEAF=0.500;MQ=53.94;MQRankSum=-8.687;QD=7.71;ReadPosRankSum=-1.462;SOR=0.914 GT:AD:DP:GQ:PL 0/1:55,25:80:99:645,0,1511 chr1 1482402 . A G 938.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.041;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=6.444;MLEAC=1;MLEAF=0.500;MQ=51.87;MQRankSum=-9.986;QD=7.82;ReadPosRankSum=1.144;SOR=1.344 GT:AD:DP:GQ:PL 0/1:77,43:120:99:967,0,2441 chr1 1482624 . T C 2564.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.528;ClippingRankSum=0.000;DP=215;ExcessHet=3.0103;FS=2.359;MLEAC=1;MLEAF=0.500;MQ=55.11;MQRankSum=-12.008;QD=11.93;ReadPosRankSum=-0.345;SOR=0.548 GT:AD:DP:GQ:PL 0/1:115,100:215:99:2593,0,3023 chr1 1483151 . G A 377.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.94;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:406,30,0 chr1 1485642 . A G 614.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.051;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.60;ReadPosRankSum=-1.569;SOR=0.552 GT:AD:DP:GQ:PL 0/1:36,22:58:99:643,0,1149 chr1 1486151 . C A 4107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.958;ClippingRankSum=0.000;DP=375;ExcessHet=3.0103;FS=1.220;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.98;ReadPosRankSum=-0.005;SOR=0.612 GT:AD:DP:GQ:PL 0/1:199,175:374:99:4136,0,5441 chr1 1486611 . G A 1552.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.816;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=2.437;MLEAC=1;MLEAF=0.500;MQ=40.53;MQRankSum=0.287;QD=11.67;ReadPosRankSum=0.138;SOR=0.959 GT:AD:DP:GQ:PL 0/1:74,59:133:99:1581,0,1982 chr1 1487887 . A G 2222.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.515;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=0.588;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.07;ReadPosRankSum=-1.473;SOR=0.791 GT:AD:DP:GQ:PL 0/1:74,84:158:99:2251,0,1869 chr1 1489315 . G A 3317.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.358;ClippingRankSum=0.000;DP=258;ExcessHet=3.0103;FS=3.712;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.86;ReadPosRankSum=-1.287;SOR=0.954 GT:AD:DP:GQ:PL 0/1:134,124:258:99:3346,0,3729 chr1 1489916 . C T 595.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.103;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=1.602;MLEAC=1;MLEAF=0.500;MQ=59.51;MQRankSum=-0.629;QD=17.52;ReadPosRankSum=-0.733;SOR=1.276 GT:AD:DP:GQ:PL 0/1:11,23:34:99:624,0,256 chr1 1490027 . A G 121.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.45;MQRankSum=-1.501;QD=12.18;ReadPosRankSum=-0.150;SOR=0.307 GT:AD:DP:GQ:PL 0/1:6,4:10:99:150,0,317 chr1 1490032 . A G 121.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.45;MQRankSum=-1.501;QD=12.18;ReadPosRankSum=-0.637;SOR=0.307 GT:AD:DP:GQ:PL 0/1:6,4:10:99:150,0,317 chr1 1490046 . G A 196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.898;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.187;MLEAC=1;MLEAF=0.500;MQ=58.31;MQRankSum=-1.465;QD=13.12;ReadPosRankSum=-0.174;SOR=1.371 GT:AD:DP:GQ:PL 0/1:9,6:15:99:225,0,455 chr1 1490047 . A G 196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.949;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.187;MLEAC=1;MLEAF=0.500;MQ=58.31;MQRankSum=-1.465;QD=13.12;ReadPosRankSum=-0.298;SOR=1.371 GT:AD:DP:GQ:PL 0/1:9,6:15:99:225,0,455 chr1 1490320 . T C 7230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.042;ClippingRankSum=0.000;DP=499;ExcessHet=3.0103;FS=1.106;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.49;ReadPosRankSum=-0.620;SOR=0.665 GT:AD:DP:GQ:PL 0/1:225,274:499:99:7259,0,5692 chr1 1495204 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 1503593 . A G 2151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.422;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.37;ReadPosRankSum=0.805;SOR=0.737 GT:AD:DP:GQ:PL 0/1:57,83:140:99:2180,0,1489 chr1 1504889 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 1512376 . G C 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.260;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=51.80;MQRankSum=-1.884;QD=15.08;ReadPosRankSum=-0.355;SOR=3.056 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,111 chr1 1512720 . A G 904.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.186;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.51;MQRankSum=-1.539;QD=19.25;ReadPosRankSum=-1.392;SOR=0.569 GT:AD:DP:GQ:PL 0/1:16,31:47:99:933,0,381 chr1 1513923 . G C 130.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.17;QD=26.18;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:159,15,0 chr1 1516000 . T C 3383.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.796;ClippingRankSum=0.000;DP=297;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.29;MQRankSum=-3.136;QD=11.39;ReadPosRankSum=-2.031;SOR=0.684 GT:AD:DP:GQ:PL 0/1:158,139:297:99:3412,0,4173 chr1 1516109 . T C 2263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.981;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.02;MQRankSum=-2.367;QD=20.03;ReadPosRankSum=0.540;SOR=0.641 GT:AD:DP:GQ:PL 0/1:55,58:113:99:2292,0,2930 chr1 1516110 . G A 2263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.314;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.04;MQRankSum=-2.320;QD=19.86;ReadPosRankSum=0.332;SOR=0.660 GT:AD:DP:GQ:PL 0/1:55,59:114:99:2292,0,2930 chr1 1517958 . C T 432.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.879;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=1.639;MLEAC=1;MLEAF=0.500;MQ=54.79;MQRankSum=-2.398;QD=11.10;ReadPosRankSum=-0.583;SOR=1.194 GT:AD:DP:GQ:PL 0/1:25,14:39:99:461,0,1853 chr1 1517976 . T C 362.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.949;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=2.208;MLEAC=1;MLEAF=0.500;MQ=58.14;MQRankSum=-2.366;QD=12.96;ReadPosRankSum=0.319;SOR=0.247 GT:AD:DP:GQ:PL 0/1:18,10:28:99:391,0,1730 chr1 1517993 . A G 304.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.839;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=2.114;MLEAC=1;MLEAF=0.500;MQ=58.95;MQRankSum=-1.803;QD=12.70;ReadPosRankSum=0.861;SOR=0.283 GT:AD:DP:GQ:PL 0/1:15,9:24:99:333,0,1414 chr1 1518827 . C T 2172.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.113;ClippingRankSum=0.000;DP=414;ExcessHet=3.0103;FS=0.618;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.26;ReadPosRankSum=-0.223;SOR=0.611 GT:AD:DP:GQ:PL 0/1:303,110:413:99:2201,0,8279 chr1 1519934 . T G 217.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.22;ReadPosRankSum=-0.619;SOR=1.863 GT:AD:DP:GQ:PL 0/1:2,6:8:66:246,0,66 chr1 1519938 . T C 217.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.22;ReadPosRankSum=-0.619;SOR=1.863 GT:AD:DP:GQ:PL 0/1:2,6:8:66:246,0,66 chr1 1520097 . C T 674.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.563;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=2.277;MLEAC=1;MLEAF=0.500;MQ=50.19;MQRankSum=-5.860;QD=10.54;ReadPosRankSum=-0.276;SOR=1.057 GT:AD:DP:GQ:PL 0/1:39,25:64:99:703,0,1028 chr1 1522652 . C T 436.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.94;MQRankSum=-1.487;QD=16.80;ReadPosRankSum=-0.627;SOR=0.693 GT:AD:DP:GQ:PL 0/1:13,13:26:99:465,0,465 chr1 1522693 . A G 944.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.054;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.93;MQRankSum=0.826;QD=16.01;ReadPosRankSum=0.099;SOR=0.495 GT:AD:DP:GQ:PL 0/1:29,30:59:99:973,0,942 chr1 1522770 . T C 1653.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.246;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=0.667;MLEAC=1;MLEAF=0.500;MQ=59.04;MQRankSum=-0.095;QD=12.62;ReadPosRankSum=-2.210;SOR=0.597 GT:AD:DP:GQ:PL 0/1:65,66:131:99:1682,0,1710 chr1 1522905 . A G 1499.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.986;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=2.144;MLEAC=1;MLEAF=0.500;MQ=56.05;MQRankSum=-6.858;QD=10.71;ReadPosRankSum=-1.163;SOR=0.885 GT:AD:DP:GQ:PL 0/1:77,63:140:99:1528,0,2104 chr1 1523022 . A G 501.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.849;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=1.266;MLEAC=1;MLEAF=0.500;MQ=51.49;MQRankSum=-6.832;QD=9.65;ReadPosRankSum=0.364;SOR=0.916 GT:AD:DP:GQ:PL 0/1:32,20:52:99:530,0,960 chr1 1523187 . A G 97.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.17;MQRankSum=-1.501;QD=9.78;ReadPosRankSum=-0.552;SOR=0.307 GT:AD:DP:GQ:PL 0/1:6,4:10:99:126,0,221 chr1 1524202 . G A 2411.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.671;ClippingRankSum=0.000;DP=188;ExcessHet=3.0103;FS=0.552;MLEAC=1;MLEAF=0.500;MQ=53.78;MQRankSum=-0.094;QD=12.83;ReadPosRankSum=1.011;SOR=0.774 GT:AD:DP:GQ:PL 0/1:93,95:188:99:2440,0,2310 chr1 1525526 . C T 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=-0.090;SOR=1.022 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,189 chr1 1527386 . C T 775.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.841;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=3.057;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.04;ReadPosRankSum=1.087;SOR=1.329 GT:AD:DP:GQ:PL 0/1:19,24:43:99:804,0,528 chr1 1533754 . T C 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.97;MQRankSum=-2.823;QD=10.88;ReadPosRankSum=0.524;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:137,0,221 chr1 1533841 . T C 989.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.937;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=3.269;MLEAC=1;MLEAF=0.500;MQ=46.10;MQRankSum=-7.992;QD=12.07;ReadPosRankSum=2.359;SOR=1.511 GT:AD:DP:GQ:PL 0/1:50,32:82:99:1018,0,1570 chr1 1533855 . G A 1353.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.763;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=8.410;MLEAC=1;MLEAF=0.500;MQ=46.10;MQRankSum=-8.624;QD=13.14;ReadPosRankSum=0.095;SOR=2.030 GT:AD:DP:GQ:PL 0/1:59,44:103:99:1382,0,1806 chr1 1533883 . G T 1938.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.224;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=0.706;MLEAC=1;MLEAF=0.500;MQ=49.90;MQRankSum=-3.261;QD=13.01;ReadPosRankSum=-2.069;SOR=0.819 GT:AD:DP:GQ:PL 0/1:77,72:149:99:1967,0,2175 chr1 1534166 . G A 3786.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.64;QD=34.74;SOR=2.368 GT:AD:DP:GQ:PL 1/1:0,109:109:99:3815,323,0 chr1 1534218 . C G 2811.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.50;QD=32.07;SOR=1.850 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2840,202,0 chr1 1534219 . G C 2853.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=45.95;QD=33.09;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2882,205,0 chr1 1534226 . C T 1256.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.558;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=2.466;MLEAC=1;MLEAF=0.500;MQ=42.30;MQRankSum=0.390;QD=22.05;ReadPosRankSum=-1.245;SOR=0.388 GT:AD:DP:GQ:PL 0/1:18,39:57:99:1285,0,556 chr1 1538787 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 1540421 . C T 374.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.883;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.85;ReadPosRankSum=-1.177;SOR=0.420 GT:AD:DP:GQ:PL 0/1:8,13:21:99:403,0,254 chr1 1541864 . T C 1022.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.421;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=3.505;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.94;ReadPosRankSum=-1.175;SOR=0.241 GT:AD:DP:GQ:PL 0/1:24,33:57:99:1051,0,751 chr1 1543806 . C A 1403.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.351;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=3.346;MLEAC=1;MLEAF=0.500;MQ=59.79;MQRankSum=-1.011;QD=14.18;ReadPosRankSum=-0.181;SOR=0.363 GT:AD:DP:GQ:PL 0/1:51,48:99:99:1432,0,1582 chr1 1543953 . A G 3031.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.978;ClippingRankSum=0.000;DP=229;ExcessHet=3.0103;FS=1.026;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.30;ReadPosRankSum=-0.215;SOR=0.597 GT:AD:DP:GQ:PL 0/1:115,113:228:99:3060,0,2999 chr1 1544846 . C T 1414.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.301;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=0.656;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.14;ReadPosRankSum=1.602;SOR=0.610 GT:AD:DP:GQ:PL 0/1:67,60:127:99:1443,0,1619 chr1 1558975 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1573654 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1574445 . A G 2693.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.628;ClippingRankSum=0.000;DP=212;ExcessHet=3.0103;FS=3.155;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.77;ReadPosRankSum=0.891;SOR=0.949 GT:AD:DP:GQ:PL 0/1:108,103:211:99:2722,0,2714 chr1 1575344 . C T 1858.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.690;ClippingRankSum=0.000;DP=130;ExcessHet=3.0103;FS=2.289;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.30;ReadPosRankSum=0.049;SOR=0.475 GT:AD:DP:GQ:PL 0/1:60,70:130:99:1887,0,1626 chr1 1575421 . C T 966.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.681;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=8.982;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.24;ReadPosRankSum=0.732;SOR=0.091 GT:AD:DP:GQ:PL 0/1:21,32:53:99:995,0,670 chr1 1577506 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 1594817 . A C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.52;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 1594820 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.06;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 1595649 . A G 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 1596449 . G A 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 1596529 . A G 134.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:163,15,0 chr1 1596882 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 1599234 . T C 1124.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.68;SOR=4.548 GT:AD:DP:GQ:PL 1/1:0,30:30:89:1153,89,0 chr1 1623412 . T C 1088.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.50;SOR=3.407 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1117,90,0 chr1 1624591 . C T 1236.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.31;SOR=4.112 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1265,99,0 chr1 1624723 . C T 1863.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.220;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.80;ReadPosRankSum=2.338;SOR=0.720 GT:AD:DP:GQ:PL 0/1:82,76:158:99:1892,0,2127 chr1 1627057 . C G 5368.77 PASS AC=2;AF=1.00;AN=2;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.81;SOR=1.334 GT:AD:DP:GQ:PL 1/1:0,145:145:99:5397,436,0 chr1 1627156 . G A 2214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.452;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=2.975;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.57;ReadPosRankSum=-1.507;SOR=0.976 GT:AD:DP:GQ:PL 0/1:70,82:152:99:2243,0,2183 chr1 1627515 . C T 2048.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.92;SOR=2.066 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2077,167,0 chr1 1635543 . T C 46.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:21:75,0,21 chr1 1638657 . A G 2436.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.637;ClippingRankSum=0.000;DP=254;ExcessHet=3.0103;FS=1.055;MLEAC=1;MLEAF=0.500;MQ=48.44;MQRankSum=-0.449;QD=9.59;ReadPosRankSum=-1.310;SOR=0.788 GT:AD:DP:GQ:PL 0/1:147,107:254:99:2465,0,3643 chr1 1638714 . G A 1731.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.272;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=2.496;MLEAC=1;MLEAF=0.500;MQ=54.58;MQRankSum=1.019;QD=11.62;ReadPosRankSum=2.088;SOR=1.092 GT:AD:DP:GQ:PL 0/1:89,60:149:99:1760,0,2856 chr1 1640475 . C G 3444.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-6.017;ClippingRankSum=0.000;DP=487;ExcessHet=3.0103;FS=19.112;MLEAC=1;MLEAF=0.500;MQ=42.21;MQRankSum=-3.277;QD=7.07;ReadPosRankSum=1.483;SOR=1.182 GT:AD:DP:GQ:PL 0/1:304,183:487:99:3473,0,8140 chr1 1645377 . T A 4303.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=402;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.60;MQRankSum=-1.165;QD=10.73;ReadPosRankSum=1.551;SOR=0.719 GT:AD:DP:GQ:PL 0/1:216,185:401:99:4332,0,5175 chr1 1646398 . G A 489.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.767;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=19.304;MLEAC=1;MLEAF=0.500;MQ=56.63;MQRankSum=-8.620;QD=5.10;ReadPosRankSum=0.474;SOR=2.891 GT:AD:DP:GQ:PL 0/1:73,23:96:99:518,0,1999 chr1 1646565 . G T 1017.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.180;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=2.461;MLEAC=1;MLEAF=0.500;MQ=50.98;MQRankSum=-5.126;QD=8.63;ReadPosRankSum=-1.458;SOR=0.956 GT:AD:DP:GQ:PL 0/1:73,45:118:99:1046,0,1997 chr1 1646841 . C T 3837.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.445;ClippingRankSum=0.000;DP=337;ExcessHet=3.0103;FS=0.828;MLEAC=1;MLEAF=0.500;MQ=56.72;MQRankSum=0.163;QD=11.46;ReadPosRankSum=0.792;SOR=0.628 GT:AD:DP:GQ:PL 0/1:179,156:335:99:3866,0,4629 chr1 1647480 . A G 727.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.644;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=11.766;MLEAC=1;MLEAF=0.500;MQ=46.54;MQRankSum=-1.732;QD=7.13;ReadPosRankSum=0.601;SOR=0.146 GT:AD:DP:GQ:PL 0/1:78,24:102:99:756,0,4773 chr1 1647483 . G T 724.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.155;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=9.440;MLEAC=1;MLEAF=0.500;MQ=46.28;MQRankSum=-1.636;QD=7.04;ReadPosRankSum=0.532;SOR=0.161 GT:AD:DP:GQ:PL 0/1:79,24:103:99:753,0,4808 chr1 1647519 . G C 282.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.059;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=13.233;MLEAC=1;MLEAF=0.500;MQ=48.52;MQRankSum=-4.956;QD=2.01;ReadPosRankSum=-0.026;SOR=1.222 GT:AD:DP:GQ:PL 0/1:116,25:141:99:311,0,3282 chr1 1648134 . T C 500.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.475;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=15.711;MLEAC=1;MLEAF=0.500;MQ=56.25;MQRankSum=-12.812;QD=2.42;ReadPosRankSum=1.944;SOR=1.643 GT:AD:DP:GQ:PL 0/1:172,35:207:99:529,0,4505 chr1 1660386 . T C 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=46.33;MQRankSum=-0.967;QD=8.44;ReadPosRankSum=0.674;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:40:62,0,40 chr1 1664417 . G A 7650.77 PASS AC=2;AF=1.00;AN=2;DP=232;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.75;QD=32.98;SOR=1.028 GT:AD:DP:GQ:PL 1/1:0,232:232:99:7679,695,0 chr1 1668108 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.78;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1668449 . A G 2733.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.875;ClippingRankSum=0.000;DP=274;ExcessHet=3.0103;FS=37.460;MLEAC=1;MLEAF=0.500;MQ=42.78;MQRankSum=9.514;QD=9.98;ReadPosRankSum=0.381;SOR=1.329 GT:AD:DP:GQ:PL 0/1:169,105:274:99:2762,0,3765 chr1 1668501 . C T 1934.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.768;ClippingRankSum=0.000;DP=203;ExcessHet=3.0103;FS=34.044;MLEAC=1;MLEAF=0.500;MQ=48.21;MQRankSum=-10.794;QD=9.53;ReadPosRankSum=-0.296;SOR=2.266 GT:AD:DP:GQ:PL 0/1:119,84:203:99:1963,0,3140 chr1 1668535 . A C 1393.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.295;ClippingRankSum=0.000;DP=177;ExcessHet=3.0103;FS=34.247;MLEAC=1;MLEAF=0.500;MQ=51.83;MQRankSum=-11.201;QD=7.87;ReadPosRankSum=-1.280;SOR=2.814 GT:AD:DP:GQ:PL 0/1:117,60:177:99:1422,0,3158 chr1 1671097 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 1671148 . C T 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr1 1671348 . G T 3190.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.68;SOR=2.252 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3219,275,0 chr1 1671724 . C T 733.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.744;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=3.468;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.34;ReadPosRankSum=0.000;SOR=2.019 GT:AD:DP:GQ:PL 0/1:18,22:40:99:762,0,591 chr1 1671797 . G A 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.823;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr1 1687521 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 1703565 . T C 18919.77 PASS AC=2;AF=1.00;AN=2;DP=609;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.57;QD=31.17;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,607:607:99:18948,1819,0 chr1 1704180 . T C 2800.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.28;QD=33.74;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2829,247,0 chr1 1704310 . C A 3003.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.47;QD=34.93;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,86:86:99:3032,258,0 chr1 1704605 . G A 15378.77 PASS AC=2;AF=1.00;AN=2;DP=475;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.12;QD=32.38;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,475:475:99:15407,1420,0 chr1 1704835 . C T 5157.77 PASS AC=2;AF=1.00;AN=2;DP=142;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.44;QD=29.95;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,142:142:99:5186,426,0 chr1 1706566 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1714932 . G T 1059.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.32;QD=26.93;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1088,84,0 chr1 1714988 . T G 482.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.97;QD=32.18;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:45:511,45,0 chr1 1715011 . G A 425.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.06;QD=28.03;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:36:454,36,0 chr1 1716247 . A C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.98;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 1716588 . T C 1264.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.42;SOR=6.932 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1293,93,0 chr1 1718824 . G T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 1718971 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 1719368 . T C 1300.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.52;SOR=1.788 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1329,120,0 chr1 1719406 . G A 1566.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.13;SOR=1.036 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1595,156,0 chr1 1720462 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.37;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr1 1720472 . C A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 1720498 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 1721565 . T C 5425.77 PASS AC=2;AF=1.00;AN=2;DP=162;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.52;QD=33.49;SOR=1.684 GT:AD:DP:GQ:PL 1/1:0,162:162:99:5454,489,0 chr1 1721589 . C T 6021.77 PASS AC=2;AF=1.00;AN=2;DP=195;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.11;QD=30.88;SOR=1.087 GT:AD:DP:GQ:PL 1/1:0,195:195:99:6050,585,0 chr1 1721864 . T C 630.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.37;QD=25.51;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:51:659,51,0 chr1 1721922 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 1725582 . T C 65.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.42;MQRankSum=-0.566;QD=7.31;ReadPosRankSum=1.981;SOR=1.022 GT:AD:DP:GQ:PL 0/1:6,3:9:94:94,0,213 chr1 1729196 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1730405 . G C 6801.77 PASS AC=2;AF=1.00;AN=2;DP=213;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.43;QD=31.93;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,213:213:99:6830,640,0 chr1 1732166 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.61;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 1732392 . C T 7927.77 PASS AC=2;AF=1.00;AN=2;DP=250;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.84;SOR=1.076 GT:AD:DP:GQ:PL 1/1:0,249:249:99:7956,746,0 chr1 1732580 . T C 5296.77 PASS AC=2;AF=1.00;AN=2;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.17;SOR=1.671 GT:AD:DP:GQ:PL 1/1:0,155:155:99:5325,465,0 chr1 1732685 . T C 2258.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.27;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2287,210,0 chr1 1737789 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.28;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 1738295 . G T 2185.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.36;QD=32.14;SOR=1.542 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2214,204,0 chr1 1753774 . C G 3316.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.23;SOR=3.030 GT:AD:DP:GQ:PL 1/1:0,85:85:99:3345,256,0 chr1 1754601 . G T 5111.77 PASS AC=2;AF=1.00;AN=2;DP=152;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.63;SOR=1.488 GT:AD:DP:GQ:PL 1/1:0,152:152:99:5140,455,0 chr1 1755504 . T C 4738.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.47;SOR=1.856 GT:AD:DP:GQ:PL 1/1:0,111:111:99:4767,334,0 chr1 1755523 . C T 3901.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.41;SOR=1.967 GT:AD:DP:GQ:PL 1/1:0,85:85:99:3930,265,0 chr1 1756186 . T C 1935.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.38;SOR=2.468 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1964,174,0 chr1 1756753 . A G 5894.77 PASS AC=2;AF=1.00;AN=2;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.47;SOR=1.596 GT:AD:DP:GQ:PL 1/1:0,171:171:99:5923,513,0 chr1 1757030 . C G 2406.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.95;SOR=3.407 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2435,187,0 chr1 1757074 . G T 1639.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.56;SOR=1.501 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1668,123,0 chr1 1758323 . T C 829.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,23:23:69:858,69,0 chr1 1765220 . A G 1738.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.30;SOR=2.880 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1767,147,0 chr1 1782275 . T G 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 1787640 . G A 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.95;ReadPosRankSum=0.253;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:98,0,68 chr1 1821925 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 1892085 . G C 945.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.880;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.997;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.03;ReadPosRankSum=-0.105;SOR=0.507 GT:AD:DP:GQ:PL 0/1:28,31:59:99:974,0,958 chr1 1892483 . A G 7408.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.763;ClippingRankSum=0.000;DP=213;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=34.78;ReadPosRankSum=-0.584;SOR=0.331 GT:AD:DP:GQ:PL 1/1:1,212:213:99:7437,598,0 chr1 1915022 . C T 148.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.180;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.53;ReadPosRankSum=1.559;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,6:9:98:177,0,98 chr1 1915143 . A G 1042.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.094;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=-0.955;SOR=0.774 GT:AD:DP:GQ:PL 0/1:27,34:61:99:1071,0,762 chr1 1917295 . A G 154.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.35;ReadPosRankSum=-0.022;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:183,0,101 chr1 1918697 . C T 281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.81;ReadPosRankSum=1.277;SOR=1.214 GT:AD:DP:GQ:PL 0/1:13,9:22:99:310,0,477 chr1 1922882 . A G 1318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.594;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=2.866;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.93;ReadPosRankSum=-0.660;SOR=1.314 GT:AD:DP:GQ:PL 0/1:25,38:63:99:1347,0,800 chr1 1924011 . A G 1090.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.940;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=5.365;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=1.142;SOR=0.140 GT:AD:DP:GQ:PL 0/1:19,33:52:99:1119,0,635 chr1 1924659 . C T 631.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.979;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=5.375;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.15;ReadPosRankSum=1.157;SOR=0.184 GT:AD:DP:GQ:PL 0/1:30,22:52:99:660,0,1017 chr1 1927692 . C T 7116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.146;ClippingRankSum=0.000;DP=551;ExcessHet=3.0103;FS=2.441;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.94;ReadPosRankSum=1.529;SOR=0.531 GT:AD:DP:GQ:PL 0/1:287,263:550:99:7145,0,7909 chr1 1930142 . C A 3655.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.540;ClippingRankSum=0.000;DP=304;ExcessHet=3.0103;FS=2.561;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.03;ReadPosRankSum=1.565;SOR=0.558 GT:AD:DP:GQ:PL 0/1:155,149:304:99:3684,0,4182 chr1 1930586 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 1938771 . G A 1723.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.996;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=3.272;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.36;ReadPosRankSum=0.508;SOR=0.272 GT:AD:DP:GQ:PL 0/1:64,56:120:99:1752,0,2210 chr1 1939978 . T C 262.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.90;ReadPosRankSum=-0.799;SOR=1.445 GT:AD:DP:GQ:PL 0/1:4,8:12:99:291,0,119 chr1 1942186 . G A 2921.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.968;ClippingRankSum=0.000;DP=237;ExcessHet=3.0103;FS=3.659;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.38;ReadPosRankSum=-0.117;SOR=0.958 GT:AD:DP:GQ:PL 0/1:127,109:236:99:2950,0,3425 chr1 1943706 . C T 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr1 1943828 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 1955420 . C T 1533.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.142;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.57;ReadPosRankSum=0.752;SOR=0.752 GT:AD:DP:GQ:PL 0/1:60,62:122:99:1562,0,1514 chr1 1955580 . A G 1129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.018;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=7.607;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.56;ReadPosRankSum=-0.779;SOR=1.313 GT:AD:DP:GQ:PL 0/1:61,46:107:99:1158,0,1623 chr1 1955806 . G A 2013.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.858;ClippingRankSum=0.000;DP=183;ExcessHet=3.0103;FS=1.827;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.00;ReadPosRankSum=0.100;SOR=0.657 GT:AD:DP:GQ:PL 0/1:103,80:183:99:2042,0,2882 chr1 1956754 . C A 6573.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.902;ClippingRankSum=0.000;DP=509;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.92;ReadPosRankSum=-0.982;SOR=0.696 GT:AD:DP:GQ:PL 0/1:270,239:509:99:6602,0,7238 chr1 1956891 . C T 2995.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.899;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=7.707;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.36;ReadPosRankSum=0.410;SOR=0.271 GT:AD:DP:GQ:PL 0/1:94,101:195:99:3024,0,2968 chr1 1956930 . A G 1922.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.486;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=8.882;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.31;ReadPosRankSum=-0.045;SOR=0.055 GT:AD:DP:GQ:PL 0/1:46,59:105:99:1951,0,1580 chr1 1957014 . G A 233.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.38;ReadPosRankSum=0.210;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,7:10:95:262,0,95 chr1 1963738 . C T 1768.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.112;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.23;ReadPosRankSum=0.348;SOR=0.715 GT:AD:DP:GQ:PL 0/1:38,59:97:99:1797,0,1110 chr1 1964101 . A G 204.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.246;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=3.039;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.38;ReadPosRankSum=1.189;SOR=1.911 GT:AD:DP:GQ:PL 0/1:11,7:18:99:233,0,371 chr1 1964746 . T C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 1964784 . C T 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.91;ReadPosRankSum=0.524;SOR=0.307 GT:AD:DP:GQ:PL 0/1:9,5:14:99:167,0,333 chr1 1965001 . G A 1664.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.199;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.17;ReadPosRankSum=1.613;SOR=0.721 GT:AD:DP:GQ:PL 0/1:78,71:149:99:1693,0,2157 chr1 1965114 . C T 894.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.099;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.992;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.33;ReadPosRankSum=-1.710;SOR=0.917 GT:AD:DP:GQ:PL 0/1:44,35:79:99:923,0,1393 chr1 1965567 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 1966030 . A G 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr1 1966152 . C T 285.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.673;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.04;ReadPosRankSum=-0.693;SOR=0.223 GT:AD:DP:GQ:PL 0/1:9,10:19:99:314,0,319 chr1 1966314 . C G 1961.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.391;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=2.132;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=-1.053;SOR=0.933 GT:AD:DP:GQ:PL 0/1:77,74:151:99:1990,0,2037 chr1 1966606 . G A 377.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.759;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.79;ReadPosRankSum=1.370;SOR=0.622 GT:AD:DP:GQ:PL 0/1:22,13:35:99:406,0,740 chr1 1967499 . G A 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 1968422 . C T 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.000;SOR=0.061 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 1968747 . T C 1430.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.250;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.55;ReadPosRankSum=0.260;SOR=0.765 GT:AD:DP:GQ:PL 0/1:36,56:92:99:1459,0,988 chr1 1968793 . T C 2786.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.18;SOR=0.897 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2815,252,0 chr1 1968893 . A G 1595.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.009;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.939;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.80;ReadPosRankSum=-0.179;SOR=0.495 GT:AD:DP:GQ:PL 0/1:30,40:70:99:1624,0,1105 chr1 1968900 . A G 1560.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.863;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=2.083;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.62;ReadPosRankSum=-0.730;SOR=0.430 GT:AD:DP:GQ:PL 0/1:29,40:69:99:1589,0,1087 chr1 1969006 . C T 1215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.428;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=34.74;ReadPosRankSum=-1.383;SOR=1.112 GT:AD:DP:GQ:PL 0/1:5,30:35:99:1244,0,118 chr1 1969015 . A G 1440.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.24;SOR=2.694 GT:AD:DP:GQ:PL 1/1:0,31:31:99:1469,99,0 chr1 1971027 . A C 146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.070;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.34;ReadPosRankSum=0.194;SOR=0.693 GT:AD:DP:GQ:PL 0/1:14,6:20:99:175,0,411 chr1 1971864 . C T 3618.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.36;SOR=6.759 GT:AD:DP:GQ:PL 1/1:0,89:89:99:3647,268,0 chr1 1971918 . G C 3008.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.768;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=0.658;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.35;ReadPosRankSum=1.613;SOR=0.585 GT:AD:DP:GQ:PL 0/1:93,103:196:99:3037,0,2766 chr1 1972273 . C A 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.11;ReadPosRankSum=0.979;SOR=0.180 GT:AD:DP:GQ:PL 0/1:8,8:16:99:286,0,254 chr1 1974351 . A G 1392.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.404;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=6.242;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.33;ReadPosRankSum=-0.054;SOR=2.036 GT:AD:DP:GQ:PL 0/1:35,41:76:99:1421,0,1049 chr1 1984586 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 1984595 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 1984601 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 1985451 . C T 1774.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.762;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=2.340;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.55;ReadPosRankSum=0.188;SOR=0.934 GT:AD:DP:GQ:PL 0/1:57,65:122:99:1803,0,1469 chr1 1985619 . A G 176.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.949;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.78;ReadPosRankSum=1.217;SOR=1.230 GT:AD:DP:GQ:PL 0/1:9,6:15:99:205,0,297 chr1 1986752 . A G 528.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.56;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,14:14:42:557,42,0 chr1 1987049 . A G 6331.77 PASS AC=2;AF=1.00;AN=2;DP=188;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.86;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,187:187:99:6360,562,0 chr1 1987096 . A T 1958.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.483;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.15;ReadPosRankSum=-0.103;SOR=0.661 GT:AD:DP:GQ:PL 0/1:74,75:149:99:1987,0,1996 chr1 1987145 . C T 1428.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.276;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=4.013;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.48;ReadPosRankSum=-0.114;SOR=1.148 GT:AD:DP:GQ:PL 0/1:54,52:106:99:1457,0,1547 chr1 1987156 . G A 1291.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.611;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=9.089;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.85;ReadPosRankSum=0.531;SOR=1.796 GT:AD:DP:GQ:PL 0/1:45,42:87:99:1320,0,1311 chr1 1989803 . A G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 1990864 . C T 2065.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.51;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2094,210,0 chr1 1991835 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 1991841 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 2004049 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 2004070 . T C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:81,0,33 chr1 2021813 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 2024545 . C T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 2024923 . G A 7506.77 PASS AC=2;AF=1.00;AN=2;DP=228;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.92;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,228:228:99:7535,683,0 chr1 2025598 . T C 10981.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.113;ClippingRankSum=0.000;DP=815;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=0.275;SOR=0.649 GT:AD:DP:GQ:PL 0/1:406,409:815:99:11010,0,10851 chr1 2025860 . C T 1310.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.171;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=3.040;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.24;ReadPosRankSum=-1.250;SOR=2.137 GT:AD:DP:GQ:PL 0/1:46,40:86:99:1339,0,1662 chr1 2027416 . T C 565.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.447;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=2.191;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.29;ReadPosRankSum=-1.029;SOR=1.702 GT:AD:DP:GQ:PL 0/1:19,18:37:99:594,0,614 chr1 2027822 . A G 1439.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.86;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1468,108,0 chr1 2029235 . C T 760.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.918;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=3.261;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.03;ReadPosRankSum=-0.545;SOR=0.850 GT:AD:DP:GQ:PL 0/1:37,32:69:99:789,0,1015 chr1 2029487 . T C 2346.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.07;SOR=4.840 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2375,178,0 chr1 2029969 . C T 2316.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.437;ClippingRankSum=0.000;DP=182;ExcessHet=3.0103;FS=4.345;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.87;ReadPosRankSum=-0.760;SOR=0.438 GT:AD:DP:GQ:PL 0/1:92,88:180:99:2345,0,2421 chr1 2033373 . T G 43.79 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.95;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:23:72,0,23 chr1 2035177 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2035220 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2037392 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 2037520 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2039950 . G C 125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.97;ReadPosRankSum=-0.712;SOR=1.981 GT:AD:DP:GQ:PL 0/1:2,5:7:28:154,0,28 chr1 2048285 . C A 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=-0.524;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,4:6:31:115,0,31 chr1 2056364 . G A 308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.023;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.65;ReadPosRankSum=0.416;SOR=0.509 GT:AD:DP:GQ:PL 0/1:20,12:32:99:337,0,625 chr1 2056554 . T C 1848.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.267;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=0.569;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.00;ReadPosRankSum=1.635;SOR=0.611 GT:AD:DP:GQ:PL 0/1:89,79:168:99:1877,0,2198 chr1 2059575 . A G 4361.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.582;ClippingRankSum=0.000;DP=319;ExcessHet=3.0103;FS=2.422;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.72;ReadPosRankSum=-0.321;SOR=0.566 GT:AD:DP:GQ:PL 0/1:156,162:318:99:4390,0,4093 chr1 2059684 . G A 3214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.189;ClippingRankSum=0.000;DP=265;ExcessHet=3.0103;FS=0.464;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.18;ReadPosRankSum=1.271;SOR=0.759 GT:AD:DP:GQ:PL 0/1:132,132:264:99:3243,0,3506 chr1 2059734 . A G 2141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.050;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=2.824;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.67;ReadPosRankSum=-0.061;SOR=1.022 GT:AD:DP:GQ:PL 0/1:75,71:146:99:2170,0,2202 chr1 2059802 . C G 466.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.795;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.11;ReadPosRankSum=-0.762;SOR=0.283 GT:AD:DP:GQ:PL 0/1:27,15:42:99:495,0,985 chr1 2059863 . G A 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.047;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.91;ReadPosRankSum=-1.004;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,4:14:99:125,0,341 chr1 2069856 . A C 42.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 2070417 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2074301 . T C 2683.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.521;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.49;ReadPosRankSum=-0.914;SOR=0.896 GT:AD:DP:GQ:PL 1/1:1,90:91:99:2712,258,0 chr1 2074366 . C G 296.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.493;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.27;ReadPosRankSum=0.770;SOR=0.509 GT:AD:DP:GQ:PL 0/1:20,12:32:99:325,0,677 chr1 2076235 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2077003 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.126;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,129 chr1 2077005 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.126;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,129 chr1 2088267 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 2103940 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 2104360 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2104538 . G T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 2106487 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 2106488 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 2108280 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 2112545 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 2126584 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 2135551 . C T 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.502;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.91;ReadPosRankSum=0.296;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,5:13:99:170,0,275 chr1 2152298 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 2175401 . T C 882.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.95;SOR=6.593 GT:AD:DP:GQ:PL 1/1:0,26:26:76:911,76,0 chr1 2175457 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.21;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 2187100 . T C 1196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.560;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=3.715;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.98;ReadPosRankSum=-0.303;SOR=1.096 GT:AD:DP:GQ:PL 0/1:62,47:109:99:1225,0,1666 chr1 2189679 . C T 3127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.368;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.42;ReadPosRankSum=3.383;SOR=0.706 GT:AD:DP:GQ:PL 0/1:116,117:233:99:3156,0,3082 chr1 2213543 . G T 751.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.458;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=1.839;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=-0.671;SOR=0.938 GT:AD:DP:GQ:PL 0/1:64,33:97:99:780,0,1733 chr1 2287526 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.00;MQRankSum=-0.431;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:62:81,0,62 chr1 2287529 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.00;MQRankSum=-0.431;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:62:81,0,62 chr1 2294894 . T A 59.22 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=19.74;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,2:3:4:86,4,0 chr1 2302812 . A G 669.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.36;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:51:698,51,0 chr1 2303193 . G A 1760.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.281;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=3.423;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.92;ReadPosRankSum=-1.231;SOR=1.017 GT:AD:DP:GQ:PL 0/1:55,63:118:99:1789,0,1627 chr1 2303464 . C T 2003.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.289;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.16;ReadPosRankSum=0.820;SOR=0.613 GT:AD:DP:GQ:PL 0/1:71,53:124:99:2032,0,4199 chr1 2303470 . C T 1984.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.025;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.68;ReadPosRankSum=-0.273;SOR=0.727 GT:AD:DP:GQ:PL 0/1:66,53:119:99:2013,0,4164 chr1 2303580 . T C 308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.579;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=6.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.70;ReadPosRankSum=0.997;SOR=0.041 GT:AD:DP:GQ:PL 0/1:10,11:21:99:337,0,337 chr1 2304217 . G A 413.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.273;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=3.965;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.55;ReadPosRankSum=-0.581;SOR=0.199 GT:AD:DP:GQ:PL 0/1:9,16:25:99:442,0,369 chr1 2304223 . G A 304.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.208;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.70;ReadPosRankSum=0.715;SOR=0.917 GT:AD:DP:GQ:PL 0/1:15,9:24:99:333,0,603 chr1 2304233 . C T 346.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.231;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=-0.637;SOR=0.627 GT:AD:DP:GQ:PL 0/1:13,10:23:99:375,0,558 chr1 2305809 . A G 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.765;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=-0.262;SOR=0.223 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,128 chr1 2315634 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 2319918 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 2321320 . A G 1762.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.56;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1791,153,0 chr1 2324037 . C T 874.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.746;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=5.820;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.83;ReadPosRankSum=-0.294;SOR=0.234 GT:AD:DP:GQ:PL 0/1:27,32:59:99:903,0,821 chr1 2324194 . G A 3500.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.03;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,106:106:99:3529,318,0 chr1 2325423 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 2333737 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 2337131 . A G 278.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.85;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:307,24,0 chr1 2337141 . G A 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=-1.368;SOR=0.446 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,146 chr1 2337211 . C G 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=0.652;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,112 chr1 2337239 . T C 200.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:229,18,0 chr1 2337298 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.53;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 2337299 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.81;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 2342466 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 2344510 . C G 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 2344761 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2346801 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2351827 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.35;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 2351874 . C G 223.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.434;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.65;ReadPosRankSum=0.349;SOR=1.085 GT:AD:DP:GQ:PL 0/1:5,7:12:99:252,0,139 chr1 2353459 . T G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 2355508 . A G 4176.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.49;SOR=1.006 GT:AD:DP:GQ:PL 1/1:0,137:137:99:4205,410,0 chr1 2355671 . C T 216.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.135;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.45;ReadPosRankSum=0.238;SOR=2.030 GT:AD:DP:GQ:PL 0/1:7,8:15:99:245,0,209 chr1 2357308 . T C 445.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.26;ReadPosRankSum=-0.465;SOR=0.352 GT:AD:DP:GQ:PL 0/1:9,13:22:99:474,0,310 chr1 2357413 . G A 1450.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.081;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=3.193;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=0.414;SOR=0.379 GT:AD:DP:GQ:PL 0/1:53,50:103:99:1479,0,1626 chr1 2358817 . G A 558.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.030;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.10;ReadPosRankSum=-0.513;SOR=1.445 GT:AD:DP:GQ:PL 0/1:20,17:37:99:587,0,716 chr1 2358849 . T C 245.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.260;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.29;ReadPosRankSum=0.588;SOR=1.179 GT:AD:DP:GQ:PL 0/1:12,8:20:99:274,0,480 chr1 2358850 . G C 378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.112;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.94;ReadPosRankSum=-0.549;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,12:20:99:407,0,300 chr1 2358911 . G T 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=0.000;SOR=0.148 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr1 2374713 . C T 769.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.76;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,21:21:63:798,63,0 chr1 2376590 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 2377643 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2378754 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.674;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,109 chr1 2379031 . A T 1819.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.735;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=4.124;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=-0.170;SOR=0.432 GT:AD:DP:GQ:PL 0/1:81,71:152:99:1848,0,2220 chr1 2381344 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2381504 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2384876 . A G 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 2384965 . C T 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=-0.355;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:145,0,145 chr1 2385144 . C T 658.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.058;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=2.535;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=0.091;SOR=1.255 GT:AD:DP:GQ:PL 0/1:21,28:49:99:687,0,478 chr1 2385259 . C T 382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.550;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=2.870;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.35;ReadPosRankSum=-1.143;SOR=0.339 GT:AD:DP:GQ:PL 0/1:20,17:37:99:411,0,644 chr1 2387214 . G A 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=-0.108;SOR=0.446 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,112 chr1 2395636 . C T 328.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.30;ReadPosRankSum=0.248;SOR=0.793 GT:AD:DP:GQ:PL 0/1:9,10:19:99:357,0,319 chr1 2397275 . A G 1357.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.695;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=7.313;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.93;ReadPosRankSum=0.033;SOR=0.222 GT:AD:DP:GQ:PL 0/1:56,49:105:99:1386,0,1791 chr1 2401201 . T C 175.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.426;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.55;ReadPosRankSum=-1.755;SOR=1.402 GT:AD:DP:GQ:PL 0/1:8,6:14:99:204,0,226 chr1 2405593 . C T 461.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.521;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.49;ReadPosRankSum=-1.220;SOR=0.534 GT:AD:DP:GQ:PL 0/1:11,17:28:99:490,0,307 chr1 2406098 . C G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 2407130 . T C 376.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.159;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.77;ReadPosRankSum=0.619;SOR=0.324 GT:AD:DP:GQ:PL 0/1:20,12:32:99:405,0,690 chr1 2407219 . G A 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=-0.366;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr1 2408761 . T C 2815.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.077;ClippingRankSum=0.000;DP=260;ExcessHet=3.0103;FS=5.935;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.83;ReadPosRankSum=1.508;SOR=1.041 GT:AD:DP:GQ:PL 0/1:151,109:260:99:2844,0,4217 chr1 2409065 . C T 115.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.079;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.81;ReadPosRankSum=-0.238;SOR=0.693 GT:AD:DP:GQ:PL 0/1:12,5:17:99:144,0,416 chr1 2410634 . G T 691.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.363;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=2.694;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.87;ReadPosRankSum=0.270;SOR=0.869 GT:AD:DP:GQ:PL 0/1:20,21:41:99:720,0,712 chr1 2411061 . G A 218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.111;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=-1.087;SOR=1.609 GT:AD:DP:GQ:PL 0/1:8,7:15:99:247,0,255 chr1 2427316 . G C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.86;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 2427319 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 2430201 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 2430227 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 2435655 . C T 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=-0.712;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:28:120,0,28 chr1 2436793 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 2441419 . T C 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 2441515 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2444067 . C T 104.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:132,12,0 chr1 2450100 . C T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 2450129 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 2452317 . A G 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=0.524;SOR=1.447 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr1 2453756 . C T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 2453797 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2456397 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 2456400 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 2456409 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 2456474 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 2457005 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 2457384 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 2457389 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 2459276 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 2465741 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2466557 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 2467680 . A G 4687.77 PASS AC=2;AF=1.00;AN=2;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.65;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,107:107:99:4716,328,0 chr1 2467710 . A G 4812.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.39;SOR=0.946 GT:AD:DP:GQ:PL 1/1:0,113:113:99:4841,343,0 chr1 2468165 . G C 103.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:131,9,0 chr1 2468175 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 2472415 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2473606 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2476439 . C T 62.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.876;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.010;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.28;ReadPosRankSum=0.210;SOR=0.105 GT:AD:DP:GQ:PL 0/1:6,4:10:91:91,0,186 chr1 2477222 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 2477944 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 2478453 . A G 2405.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.032;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=0.705;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.95;ReadPosRankSum=1.102;SOR=0.572 GT:AD:DP:GQ:PL 0/1:53,81:134:99:2434,0,1456 chr1 2480012 . A G 2959.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.641;ClippingRankSum=0.000;DP=220;ExcessHet=3.0103;FS=8.607;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.45;ReadPosRankSum=-1.845;SOR=1.050 GT:AD:DP:GQ:PL 0/1:116,104:220:99:2988,0,3343 chr1 2487186 . C T 2197.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.316;ClippingRankSum=0.000;DP=186;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.82;ReadPosRankSum=-1.403;SOR=0.683 GT:AD:DP:GQ:PL 0/1:100,86:186:99:2226,0,2909 chr1 2489151 . T C 6055.77 PASS AC=2;AF=1.00;AN=2;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.46;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,159:159:99:6084,478,0 chr1 2489351 . G T 6469.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.397;ClippingRankSum=0.000;DP=517;ExcessHet=3.0103;FS=1.110;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.54;ReadPosRankSum=0.990;SOR=0.837 GT:AD:DP:GQ:PL 0/1:255,261:516:99:6498,0,6453 chr1 2489474 . A G 2196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.144;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=5.307;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.55;ReadPosRankSum=-0.480;SOR=1.405 GT:AD:DP:GQ:PL 0/1:83,68:151:99:2225,0,2632 chr1 2489678 . C T 2106.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.651;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=0.862;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.84;ReadPosRankSum=-1.478;SOR=0.856 GT:AD:DP:GQ:PL 0/1:65,68:133:99:2135,0,1981 chr1 2491175 . G A 1960.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.266;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=2.124;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.90;ReadPosRankSum=1.194;SOR=0.921 GT:AD:DP:GQ:PL 0/1:75,77:152:99:1989,0,1898 chr1 2492978 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2494553 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 2495327 . A G 255.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.113;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.05;ReadPosRankSum=-0.790;SOR=1.179 GT:AD:DP:GQ:PL 0/1:9,8:17:99:284,0,201 chr1 2496273 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.674;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr1 2497435 . T C 4865.77 PASS AC=2;AF=1.00;AN=2;DP=158;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.80;SOR=10.138 GT:AD:DP:GQ:PL 1/1:0,158:158:99:4894,452,0 chr1 2499031 . G T 348.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.397;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.63;ReadPosRankSum=0.299;SOR=0.765 GT:AD:DP:GQ:PL 0/1:18,12:30:99:377,0,593 chr1 2499178 . C T 752.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.185;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=3.880;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.97;ReadPosRankSum=0.783;SOR=0.744 GT:AD:DP:GQ:PL 0/1:75,33:108:99:781,0,1898 chr1 2502461 . C T 383.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.582;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.92;ReadPosRankSum=-0.213;SOR=0.802 GT:AD:DP:GQ:PL 0/1:26,17:43:99:412,0,753 chr1 2503817 . C T 545.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.031;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=3.093;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.05;ReadPosRankSum=0.322;SOR=1.321 GT:AD:DP:GQ:PL 0/1:17,17:34:99:574,0,569 chr1 2508763 . G A 1001.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.377;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=4.471;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=2.551;SOR=0.330 GT:AD:DP:GQ:PL 0/1:47,39:86:99:1030,0,1262 chr1 2509197 . C T 348.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.486;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.906;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.95;ReadPosRankSum=0.522;SOR=0.330 GT:AD:DP:GQ:PL 0/1:13,12:25:99:377,0,400 chr1 2509919 . T C 1610.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.357;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=3.872;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.95;ReadPosRankSum=-0.106;SOR=0.409 GT:AD:DP:GQ:PL 0/1:39,62:101:99:1639,0,1136 chr1 2509953 . T C 1928.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.194;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=11.422;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.07;ReadPosRankSum=0.368;SOR=0.238 GT:AD:DP:GQ:PL 0/1:58,70:128:99:1957,0,1652 chr1 2511286 . C A 2503.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.271;ClippingRankSum=0.000;DP=188;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.46;ReadPosRankSum=-1.684;SOR=0.717 GT:AD:DP:GQ:PL 0/1:94,92:186:99:2532,0,2800 chr1 2513967 . A G 2295.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.186;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=2.794;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-0.281;SOR=0.917 GT:AD:DP:GQ:PL 0/1:74,86:160:99:2324,0,2034 chr1 2514560 . T C 315.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.440;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.74;ReadPosRankSum=0.463;SOR=0.458 GT:AD:DP:GQ:PL 0/1:7,9:16:99:344,0,267 chr1 2514561 . C T 315.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.111;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.05;ReadPosRankSum=0.904;SOR=0.368 GT:AD:DP:GQ:PL 0/1:7,8:15:99:344,0,267 chr1 2514568 . G T 292.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.559;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=32.53;ReadPosRankSum=1.593;SOR=0.941 GT:AD:DP:GQ:PL 0/1:4,5:9:99:321,0,186 chr1 2514573 . A G 175.77 PASS AC=1;AF=0.500;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;QD=31.38;SOR=1.981 GT:AD:DP:GQ:PL 0/1:0,5:5:69:204,0,69 chr1 2514577 . T C 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.03;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr1 2514579 . T C 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.49;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr1 2514580 . G A 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.09;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr1 2514590 . G T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.39;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 2515441 . A G 2646.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.561;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=0.616;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.48;ReadPosRankSum=-0.073;SOR=0.807 GT:AD:DP:GQ:PL 0/1:79,92:171:99:2675,0,2166 chr1 2515521 . T C 1245.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.230;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=3.479;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.80;ReadPosRankSum=0.007;SOR=0.330 GT:AD:DP:GQ:PL 0/1:32,38:70:99:1274,0,1092 chr1 2518272 . G A 2355.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.235;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.80;ReadPosRankSum=-1.030;SOR=0.727 GT:AD:DP:GQ:PL 0/1:83,101:184:99:2384,0,1983 chr1 2518687 . C T 3162.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.353;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=6.572;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.05;ReadPosRankSum=1.623;SOR=1.216 GT:AD:DP:GQ:PL 0/1:79,87:166:99:3191,0,4077 chr1 2518704 . C A 2861.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.745;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.85;ReadPosRankSum=1.140;SOR=0.764 GT:AD:DP:GQ:PL 0/1:58,73:131:99:2890,0,3541 chr1 2518955 . A G 408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.852;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=3.128;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=1.219;SOR=0.123 GT:AD:DP:GQ:PL 0/1:11,14:25:99:437,0,378 chr1 2520664 . A G 1873.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.779;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=0.656;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.64;ReadPosRankSum=1.030;SOR=0.604 GT:AD:DP:GQ:PL 0/1:92,69:161:99:1902,0,2558 chr1 2520918 . G A 2212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.429;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=8.674;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.00;ReadPosRankSum=-1.140;SOR=1.408 GT:AD:DP:GQ:PL 0/1:85,73:158:99:2241,0,2411 chr1 2521130 . T C 3551.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.83;SOR=2.108 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3580,315,0 chr1 2523270 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 2539247 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2556327 . T C 4088.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.008;ClippingRankSum=0.000;DP=306;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.36;ReadPosRankSum=1.713;SOR=0.687 GT:AD:DP:GQ:PL 0/1:152,154:306:99:4117,0,4040 chr1 2556959 . C T 62.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:90,9,0 chr1 2557169 . T C 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr1 2559010 . A G 4103.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.547;ClippingRankSum=0.000;DP=268;ExcessHet=3.0103;FS=0.447;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.31;ReadPosRankSum=-1.087;SOR=0.688 GT:AD:DP:GQ:PL 0/1:118,150:268:99:4132,0,3151 chr1 2559232 . C T 3092.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.803;ClippingRankSum=0.000;DP=232;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.33;ReadPosRankSum=0.759;SOR=0.695 GT:AD:DP:GQ:PL 0/1:119,113:232:99:3121,0,3213 chr1 2559459 . C A 975.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.364;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=18.170;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.51;ReadPosRankSum=-0.560;SOR=1.715 GT:AD:DP:GQ:PL 0/1:98,52:150:99:1004,0,2263 chr1 2559766 . C T 3299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.650;ClippingRankSum=0.000;DP=211;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.64;ReadPosRankSum=-0.666;SOR=0.670 GT:AD:DP:GQ:PL 0/1:89,122:211:99:3328,0,2638 chr1 2559867 . G A 4905.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.581;ClippingRankSum=0.000;DP=366;ExcessHet=3.0103;FS=6.055;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=0.868;SOR=0.515 GT:AD:DP:GQ:PL 0/1:165,200:365:99:4934,0,4112 chr1 2560864 . G A 1329.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.872;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=2.944;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.22;ReadPosRankSum=-0.565;SOR=0.283 GT:AD:DP:GQ:PL 0/1:30,43:73:99:1358,0,927 chr1 2563377 . C T 801.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.582;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.06;ReadPosRankSum=0.364;SOR=1.055 GT:AD:DP:GQ:PL 0/1:20,27:47:99:830,0,645 chr1 2565143 . G C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.90;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 2565214 . A G 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.009;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.25;ReadPosRankSum=-0.639;SOR=0.527 GT:AD:DP:GQ:PL 0/1:9,6:15:99:137,0,229 chr1 2565478 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 2581013 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 2586747 . A G 537.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.61;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,16:16:48:566,48,0 chr1 2588863 . T C 1343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.121;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.80;ReadPosRankSum=-1.022;SOR=0.761 GT:AD:DP:GQ:PL 0/1:54,51:105:99:1372,0,1397 chr1 2589061 . G A 1118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.068;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.92;ReadPosRankSum=1.909;SOR=0.784 GT:AD:DP:GQ:PL 0/1:32,43:75:99:1147,0,805 chr1 2589088 . T C 982.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.335;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.20;ReadPosRankSum=0.189;SOR=0.804 GT:AD:DP:GQ:PL 0/1:21,33:54:99:1011,0,644 chr1 2591773 . G C 821.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.749;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=2.454;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.67;ReadPosRankSum=0.438;SOR=1.179 GT:AD:DP:GQ:PL 0/1:30,26:56:99:850,0,956 chr1 2592191 . A G 58.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.547;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.52;ReadPosRankSum=0.255;SOR=0.495 GT:AD:DP:GQ:PL 0/1:10,3:13:87:87,0,289 chr1 2592766 . C T 2085.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.518;ClippingRankSum=0.000;DP=154;ExcessHet=3.0103;FS=0.626;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.54;ReadPosRankSum=-0.815;SOR=0.601 GT:AD:DP:GQ:PL 0/1:71,83:154:99:2114,0,1911 chr1 2593018 . T C 273.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.825;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=8.921;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.14;ReadPosRankSum=-1.174;SOR=0.027 GT:AD:DP:GQ:PL 0/1:17,10:27:99:302,0,628 chr1 2594221 . G A 768.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.732;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=5.226;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.47;ReadPosRankSum=-1.372;SOR=0.109 GT:AD:DP:GQ:PL 0/1:25,19:44:99:797,0,1902 chr1 2594226 . T C 765.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.308;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=5.150;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.95;ReadPosRankSum=-1.599;SOR=0.117 GT:AD:DP:GQ:PL 0/1:27,21:48:99:794,0,1941 chr1 2595307 . A G 1351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.589;ClippingRankSum=0.000;DP=148;ExcessHet=3.0103;FS=0.625;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.13;ReadPosRankSum=1.484;SOR=0.625 GT:AD:DP:GQ:PL 0/1:93,55:148:99:1380,0,2293 chr1 2596239 . A G 1871.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.973;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=10.940;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.09;ReadPosRankSum=-0.479;SOR=1.824 GT:AD:DP:GQ:PL 0/1:62,62:124:99:1900,0,1750 chr1 2596694 . T C 4807.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.531;ClippingRankSum=0.000;DP=350;ExcessHet=3.0103;FS=0.815;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.82;ReadPosRankSum=-0.631;SOR=0.638 GT:AD:DP:GQ:PL 0/1:162,186:348:99:4836,0,3964 chr1 2597243 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2597921 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2597998 . C T 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 2598497 . G A 1123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.511;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=5.093;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.02;ReadPosRankSum=0.068;SOR=0.332 GT:AD:DP:GQ:PL 0/1:57,45:102:99:1152,0,1679 chr1 2598973 . G A 782.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.048;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.09;ReadPosRankSum=1.311;SOR=1.121 GT:AD:DP:GQ:PL 0/1:17,24:41:99:811,0,484 chr1 2603362 . G C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 2604174 . C A 972.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.011;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=4.189;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.31;ReadPosRankSum=-0.347;SOR=0.679 GT:AD:DP:GQ:PL 0/1:51,35:86:99:1001,0,1632 chr1 2604319 . A G 1685.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.068;ClippingRankSum=0.000;DP=145;ExcessHet=3.0103;FS=2.154;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.71;ReadPosRankSum=-0.109;SOR=0.932 GT:AD:DP:GQ:PL 0/1:76,68:144:99:1714,0,1883 chr1 2604456 . C T 123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=5.798;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.51;ReadPosRankSum=0.418;SOR=0.027 GT:AD:DP:GQ:PL 0/1:14,5:19:99:152,0,525 chr1 2605656 . G A 1172.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.871;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=1.758;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=-2.033;SOR=0.981 GT:AD:DP:GQ:PL 0/1:55,43:98:99:1201,0,1458 chr1 2605790 . C T 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.921;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=4.472;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.63;ReadPosRankSum=-0.132;SOR=2.833 GT:AD:DP:GQ:PL 0/1:5,9:14:99:331,0,135 chr1 2606025 . A G 32.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.55;ReadPosRankSum=-1.645;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:61:61,0,69 chr1 2606381 . C T 2632.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.932;ClippingRankSum=0.000;DP=243;ExcessHet=3.0103;FS=2.955;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.83;ReadPosRankSum=0.533;SOR=0.525 GT:AD:DP:GQ:PL 0/1:134,109:243:99:2661,0,3569 chr1 2606399 . C T 2354.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.105;ClippingRankSum=0.000;DP=199;ExcessHet=3.0103;FS=6.439;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.83;ReadPosRankSum=-1.016;SOR=0.390 GT:AD:DP:GQ:PL 0/1:106,93:199:99:2383,0,3074 chr1 2606770 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 2606910 . G A 925.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.265;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.629;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.52;ReadPosRankSum=1.644;SOR=0.384 GT:AD:DP:GQ:PL 0/1:20,30:50:99:954,0,639 chr1 2607567 . T C 93.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0 chr1 2607742 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2609830 . A G 3933.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.332;ClippingRankSum=0.000;DP=342;ExcessHet=3.0103;FS=0.825;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.50;ReadPosRankSum=1.429;SOR=0.763 GT:AD:DP:GQ:PL 0/1:188,154:342:99:3962,0,5005 chr1 2611214 . A G 888.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.762;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=2.668;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.14;ReadPosRankSum=0.460;SOR=0.361 GT:AD:DP:GQ:PL 0/1:17,32:49:99:917,0,446 chr1 2620632 . T C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 2629296 . A G 325.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.379;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=2.907;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.58;ReadPosRankSum=0.123;SOR=1.260 GT:AD:DP:GQ:PL 0/1:29,14:43:99:354,0,651 chr1 2629443 . G A 1449.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.155;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.970;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.65;ReadPosRankSum=-0.245;SOR=0.534 GT:AD:DP:GQ:PL 0/1:25,39:64:99:1478,0,1376 chr1 2629464 . T G 1360.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.909;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.944;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.62;ReadPosRankSum=1.036;SOR=0.539 GT:AD:DP:GQ:PL 0/1:30,36:66:99:1389,0,1525 chr1 2632573 . G A 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=-0.842;SOR=0.223 GT:AD:DP:GQ:PL 0/1:3,4:7:99:112,0,104 chr1 2632744 . T C 160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.751;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.86;ReadPosRankSum=0.105;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,6:9:64:189,0,64 chr1 2640384 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2641760 . A G 5286.77 PASS AC=2;AF=1.00;AN=2;DP=156;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.89;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,156:156:99:5315,469,0 chr1 2645016 . T C 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 2653084 . A C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.44;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:57:81,0,57 chr1 2653099 . A G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.82;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,79 chr1 2653720 . G T 74.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.55;MQRankSum=-1.282;QD=12.46;ReadPosRankSum=-0.431;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,4:6:72:103,0,72 chr1 2653773 . C T 74.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.01;MQRankSum=-0.328;QD=10.68;ReadPosRankSum=0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,3:7:99:103,0,118 chr1 2653784 . C G 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.57;MQRankSum=-1.036;QD=16.15;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:75:109,0,75 chr1 2653947 . A T 85.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.108;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.17;MQRankSum=-1.068;QD=12.25;ReadPosRankSum=-0.792;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,3:7:99:114,0,201 chr1 2653962 . A C 38.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.91;MQRankSum=1.803;QD=4.85;ReadPosRankSum=-1.345;SOR=1.034 GT:AD:DP:GQ:PL 0/1:5,3:8:67:67,0,198 chr1 2654001 . T C 136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.73;MQRankSum=0.000;QD=27.35;ReadPosRankSum=0.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:72:165,0,72 chr1 2654009 . C A 136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.73;MQRankSum=0.000;QD=27.35;ReadPosRankSum=0.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:72:165,0,72 chr1 2654052 . C A 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=43.51;MQRankSum=-1.645;QD=18.35;ReadPosRankSum=0.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:75:120,0,75 chr1 2654064 . C G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=46.73;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=-0.431;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,78 chr1 2654077 . G T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.43;MQRankSum=-1.645;QD=9.35;ReadPosRankSum=-0.674;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,100 chr1 2654526 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.34;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 2655023 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.16;MQRankSum=-0.431;QD=17.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:81:81,0,232 chr1 2655034 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.16;MQRankSum=-0.431;QD=17.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:81:81,0,232 chr1 2655036 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.16;MQRankSum=-0.431;QD=17.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:81:81,0,232 chr1 2655047 . G C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.99;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,303 chr1 2655067 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.99;MQRankSum=0.000;QD=12.44;ReadPosRankSum=1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,303 chr1 2655093 . C A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.99;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,303 chr1 2783493 . C T 400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.70;ReadPosRankSum=-0.133;SOR=0.693 GT:AD:DP:GQ:PL 0/1:12,12:24:99:429,0,429 chr1 2783572 . G C 1418.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.987;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.91;ReadPosRankSum=-0.256;SOR=0.793 GT:AD:DP:GQ:PL 0/1:51,51:102:99:1447,0,1375 chr1 2787906 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 2869580 . G A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=-0.967;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,81 chr1 2870129 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2876667 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 2882147 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2887713 . C G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 2892184 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2893003 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 2894453 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2904407 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 2923260 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 2923268 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 2923787 . A G 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 2923800 . T C 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 2925148 . T A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 2925149 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.80;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr1 2926499 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 2926912 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 2927025 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2927502 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2932625 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2936438 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2966599 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 2972054 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 2980171 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 3067523 . C A 3695.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.294;ClippingRankSum=0.000;DP=295;ExcessHet=3.0103;FS=0.904;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.57;ReadPosRankSum=-0.912;SOR=0.627 GT:AD:DP:GQ:PL 0/1:155,139:294:99:3724,0,4195 chr1 3069321 . C G 421.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.826;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=3.038;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.61;ReadPosRankSum=2.880;SOR=1.961 GT:AD:DP:GQ:PL 0/1:18,13:31:99:450,0,589 chr1 3093753 . A T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr1 3093763 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr1 3118663 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3127617 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3135937 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3156991 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3168276 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.75;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 3168313 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.75;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 3168341 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.75;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 3168351 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.75;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 3170283 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 3170289 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 3200824 . C T 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.524;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 3200876 . A G 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=0.842;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,137 chr1 3259126 . G A 73.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:101,12,0 chr1 3260916 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3269756 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.92;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:76:76,0,84 chr1 3269791 . T C 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.92;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:76:76,0,84 chr1 3269793 . A G 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.92;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:76:76,0,84 chr1 3286838 . A G 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 3295189 . C T 91.03 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.34;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:12:119,12,0 chr1 3295629 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 3296027 . G C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 3300870 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3330825 . T C 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr1 3347626 . A C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 3347733 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3356261 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3356499 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3363689 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3374575 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3378408 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 3396100 . C T 418.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.888;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.17;ReadPosRankSum=1.938;SOR=0.610 GT:AD:DP:GQ:PL 0/1:5,11:16:99:447,0,361 chr1 3396103 . C T 418.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.888;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.17;ReadPosRankSum=2.187;SOR=0.610 GT:AD:DP:GQ:PL 0/1:5,11:16:99:447,0,361 chr1 3396718 . G A 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.19;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:69:69,0,71 chr1 3399449 . C G 31.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.59;ReadPosRankSum=-0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:60:60,0,75 chr1 3402897 . C T 1170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.379;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=1.823;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=-1.619;SOR=0.943 GT:AD:DP:GQ:PL 0/1:47,45:92:99:1199,0,1245 chr1 3403110 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 3403117 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 3408770 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 3410985 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 3411038 . T G 216.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.22;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:245,18,0 chr1 3411241 . C T 1827.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.237;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.726;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.49;ReadPosRankSum=-0.162;SOR=0.849 GT:AD:DP:GQ:PL 0/1:59,59:118:99:1856,0,1666 chr1 3411794 . T C 6755.77 PASS AC=2;AF=1.00;AN=2;DP=195;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.64;SOR=1.867 GT:AD:DP:GQ:PL 1/1:0,195:195:99:6784,586,0 chr1 3413017 . G A 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.68;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:3,4:7:99:145,0,104 chr1 3416119 . T C 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr1 3418328 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3424195 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 3424976 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 3425545 . G T 1945.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.371;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=3.406;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.51;ReadPosRankSum=-2.394;SOR=0.430 GT:AD:DP:GQ:PL 0/1:66,78:144:99:1974,0,1856 chr1 3425966 . G A 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.617;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=8.528;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.44;ReadPosRankSum=0.615;SOR=0.031 GT:AD:DP:GQ:PL 0/1:15,5:20:99:117,0,566 chr1 3426095 . G A 795.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.328;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=3.157;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.47;ReadPosRankSum=0.842;SOR=1.095 GT:AD:DP:GQ:PL 0/1:44,32:76:99:824,0,1242 chr1 3426240 . G T 751.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.665;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=1.892;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.06;ReadPosRankSum=-1.196;SOR=1.000 GT:AD:DP:GQ:PL 0/1:53,30:83:99:780,0,1395 chr1 3433570 . T C 31.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.671;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.65;ReadPosRankSum=1.504;SOR=0.072 GT:AD:DP:GQ:PL 0/1:10,2:12:60:60,0,554 chr1 3433609 . T C 1272.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.660;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.18;ReadPosRankSum=-0.893;SOR=0.052 GT:AD:DP:GQ:PL 0/1:28,42:70:99:1310,0,1174 chr1 3433845 . G A 2444.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.784;ClippingRankSum=0.000;DP=183;ExcessHet=3.0103;FS=2.842;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=0.803;SOR=0.501 GT:AD:DP:GQ:PL 0/1:88,94:182:99:2473,0,2377 chr1 3437385 . A G 93.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0 chr1 3439841 . A C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 3440071 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 3444450 . A T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 3445244 . T C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:81,0,33 chr1 3445251 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 3456293 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3458230 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3462993 . G T 200.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.099;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.831;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.56;ReadPosRankSum=0.234;SOR=2.093 GT:AD:DP:GQ:PL 0/1:14,7:21:99:229,0,487 chr1 3466474 . G A 259.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=4.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.29;ReadPosRankSum=0.578;SOR=0.174 GT:AD:DP:GQ:PL 0/1:12,11:23:99:288,0,364 chr1 3467029 . G T 556.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.373;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=9.226;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.31;ReadPosRankSum=-0.966;SOR=0.027 GT:AD:DP:GQ:PL 0/1:35,19:54:99:585,0,1293 chr1 3467101 . G A 1656.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.043;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=1.426;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.35;ReadPosRankSum=-0.404;SOR=0.848 GT:AD:DP:GQ:PL 0/1:100,60:160:99:1685,0,2824 chr1 3467334 . A G 3123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.836;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=7.162;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.24;ReadPosRankSum=1.078;SOR=0.337 GT:AD:DP:GQ:PL 0/1:96,109:205:99:3152,0,2902 chr1 3467488 . C T 90.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.951;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=2.769;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.67;ReadPosRankSum=0.516;SOR=1.609 GT:AD:DP:GQ:PL 0/1:12,4:16:99:119,0,419 chr1 3468565 . G A 63.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.303;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.11;ReadPosRankSum=-0.712;SOR=0.148 GT:AD:DP:GQ:PL 0/1:5,2:7:92:92,0,325 chr1 3468575 . G T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.921;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.47;ReadPosRankSum=-1.534;SOR=1.270 GT:AD:DP:GQ:PL 0/1:5,3:8:99:104,0,325 chr1 3468662 . G C 1023.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.710;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.96;ReadPosRankSum=0.347;SOR=0.941 GT:AD:DP:GQ:PL 0/1:24,30:54:99:1052,0,789 chr1 3468686 . C A 1376.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.850;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=2.968;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.12;ReadPosRankSum=-0.201;SOR=0.337 GT:AD:DP:GQ:PL 0/1:32,44:76:99:1405,0,1006 chr1 3468692 . A G 3260.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.00;SOR=3.345 GT:AD:DP:GQ:PL 1/1:0,79:79:99:3289,238,0 chr1 3468766 . T C 5521.77 PASS AC=2;AF=1.00;AN=2;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.29;SOR=1.289 GT:AD:DP:GQ:PL 1/1:0,171:171:99:5550,513,0 chr1 3471944 . G A 647.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.883;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.22;ReadPosRankSum=-0.677;SOR=0.563 GT:AD:DP:GQ:PL 0/1:26,23:49:99:676,0,834 chr1 3473163 . C T 5013.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.264;ClippingRankSum=0.000;DP=416;ExcessHet=3.0103;FS=1.753;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.08;ReadPosRankSum=1.269;SOR=0.552 GT:AD:DP:GQ:PL 0/1:213,202:415:99:5042,0,5643 chr1 3473674 . T A 3470.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.55;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3499,329,0 chr1 3474458 . G A 118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.88;ReadPosRankSum=0.175;SOR=1.911 GT:AD:DP:GQ:PL 0/1:5,5:10:99:147,0,179 chr1 3477686 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 3477892 . T C 5466.77 PASS AC=2;AF=1.00;AN=2;DP=169;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.35;SOR=1.568 GT:AD:DP:GQ:PL 1/1:0,169:169:99:5495,506,0 chr1 3478076 . A G 3710.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.904;ClippingRankSum=0.000;DP=304;ExcessHet=3.0103;FS=1.940;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.21;ReadPosRankSum=0.701;SOR=0.576 GT:AD:DP:GQ:PL 0/1:154,150:304:99:3739,0,4111 chr1 3478110 . T C 8159.77 PASS AC=2;AF=1.00;AN=2;DP=237;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.43;SOR=2.137 GT:AD:DP:GQ:PL 1/1:0,237:237:99:8188,712,0 chr1 3478475 . G A 6044.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.720;ClippingRankSum=0.000;DP=511;ExcessHet=3.0103;FS=0.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.85;ReadPosRankSum=-1.455;SOR=0.757 GT:AD:DP:GQ:PL 0/1:265,245:510:99:6073,0,6899 chr1 3478665 . T C 1641.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.17;SOR=4.125 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1670,126,0 chr1 3480045 . C T 1548.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.373;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.65;ReadPosRankSum=0.786;SOR=1.103 GT:AD:DP:GQ:PL 0/1:31,44:75:99:1577,0,1030 chr1 3480498 . G A 1255.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.255;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=0.718;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.31;ReadPosRankSum=-0.616;SOR=0.582 GT:AD:DP:GQ:PL 0/1:63,48:111:99:1284,0,1726 chr1 3480624 . T C 1821.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.60;SOR=2.701 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1850,150,0 chr1 3490227 . A G 343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.92;ReadPosRankSum=0.944;SOR=1.473 GT:AD:DP:GQ:PL 0/1:5,10:15:99:372,0,164 chr1 3490443 . G A 1514.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.083;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.00;ReadPosRankSum=-1.750;SOR=0.675 GT:AD:DP:GQ:PL 0/1:42,59:101:99:1543,0,1031 chr1 3491155 . T A 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.150;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=6.021;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=-0.319;SOR=2.788 GT:AD:DP:GQ:PL 0/1:1,3:4:51:123,0,51 chr1 3493657 . C G 1809.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.590;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=2.595;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.25;ReadPosRankSum=-0.888;SOR=0.439 GT:AD:DP:GQ:PL 0/1:58,69:127:99:1838,0,1632 chr1 3495690 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.842;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 3495854 . G A 605.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.234;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.89;ReadPosRankSum=0.403;SOR=0.634 GT:AD:DP:GQ:PL 0/1:24,23:47:99:634,0,691 chr1 3496080 . G A 664.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.888;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.038;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.31;ReadPosRankSum=-0.615;SOR=0.874 GT:AD:DP:GQ:PL 0/1:28,26:54:99:693,0,703 chr1 3496162 . C T 311.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.652;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.13;ReadPosRankSum=-0.229;SOR=0.430 GT:AD:DP:GQ:PL 0/1:14,14:28:99:340,0,387 chr1 3496429 . G A 135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.142;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.05;ReadPosRankSum=-1.094;SOR=1.609 GT:AD:DP:GQ:PL 0/1:10,5:15:99:164,0,338 chr1 3496862 . A G 553.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=1.550;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.46;ReadPosRankSum=0.135;SOR=0.303 GT:AD:DP:GQ:PL 0/1:15,15:30:99:582,0,978 chr1 3496870 . C T 519.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.119;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=3.831;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.79;ReadPosRankSum=-0.866;SOR=0.180 GT:AD:DP:GQ:PL 0/1:11,14:25:99:548,0,832 chr1 3497541 . C T 2057.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.908;ClippingRankSum=0.000;DP=170;ExcessHet=3.0103;FS=2.656;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.10;ReadPosRankSum=0.050;SOR=0.902 GT:AD:DP:GQ:PL 0/1:88,82:170:99:2086,0,2514 chr1 3499885 . C A 2605.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.731;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.89;ReadPosRankSum=-0.372;SOR=0.705 GT:AD:DP:GQ:PL 0/1:86,89:175:99:2634,0,2338 chr1 3500567 . A G 2810.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.541;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=1.615;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=1.600;SOR=0.572 GT:AD:DP:GQ:PL 0/1:128,105:233:99:2839,0,3430 chr1 3501396 . G A 1089.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.598;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=4.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.85;ReadPosRankSum=0.790;SOR=0.369 GT:AD:DP:GQ:PL 0/1:44,48:92:99:1118,0,1193 chr1 3501607 . A G 386.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.20;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,11:11:33:415,33,0 chr1 3501898 . C T 2181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.023;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=2.674;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=2.206;SOR=0.518 GT:AD:DP:GQ:PL 0/1:80,91:171:99:2210,0,1996 chr1 3502001 . T C 1784.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.41;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1813,150,0 chr1 3505022 . C T 1041.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.325;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=1.685;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.63;ReadPosRankSum=-0.922;SOR=0.502 GT:AD:DP:GQ:PL 0/1:58,40:98:99:1070,0,1549 chr1 3505094 . A T 1476.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.770;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.91;ReadPosRankSum=0.547;SOR=0.700 GT:AD:DP:GQ:PL 0/1:69,55:124:99:1505,0,1894 chr1 3507824 . G A 4689.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.463;ClippingRankSum=0.000;DP=335;ExcessHet=3.0103;FS=1.354;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.04;ReadPosRankSum=-1.213;SOR=0.612 GT:AD:DP:GQ:PL 0/1:166,168:334:99:4718,0,4647 chr1 3508866 . A G 674.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.310;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=1.756;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.30;ReadPosRankSum=0.129;SOR=0.339 GT:AD:DP:GQ:PL 0/1:18,21:39:99:703,0,622 chr1 3511596 . T G 2352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.900;ClippingRankSum=0.000;DP=174;ExcessHet=3.0103;FS=0.571;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.52;ReadPosRankSum=0.067;SOR=0.622 GT:AD:DP:GQ:PL 0/1:89,85:174:99:2381,0,2397 chr1 3511860 . G C 625.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.295;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.55;ReadPosRankSum=-0.621;SOR=0.836 GT:AD:DP:GQ:PL 0/1:25,18:43:99:654,0,1814 chr1 3511864 . C T 625.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.681;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=3.491;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=-0.016;SOR=1.402 GT:AD:DP:GQ:PL 0/1:25,16:41:99:654,0,1814 chr1 3512044 . G A 1056.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.801;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=2.860;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.24;ReadPosRankSum=0.252;SOR=1.051 GT:AD:DP:GQ:PL 0/1:52,42:94:99:1085,0,1343 chr1 3515714 . C G 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=-0.699;SOR=0.120 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,217 chr1 3524083 . T C 2272.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.42;SOR=2.105 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2301,204,0 chr1 3524379 . A C 706.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.028;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.10;ReadPosRankSum=0.335;SOR=0.903 GT:AD:DP:GQ:PL 0/1:14,23:37:99:735,0,439 chr1 3531350 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 3546340 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 3567673 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3567751 . C G 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 3577965 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3579417 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 3579490 . G C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 3579764 . T C 1148.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.82;SOR=2.368 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1177,105,0 chr1 3579915 . T C 2280.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.82;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2309,220,0 chr1 3580381 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 3587896 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.88;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 3587907 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 3587914 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 3587916 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 3587922 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 3587923 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 3587933 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 3588517 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3595777 . C T 350.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.89;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:33:379,33,0 chr1 3595952 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 3595982 . G A 79.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:108,15,0 chr1 3596236 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 3599672 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3600216 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3602293 . A C 355.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.02;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:384,30,0 chr1 3602380 . T C 1141.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.86;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1170,111,0 chr1 3602598 . G A 869.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.385;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=0.801;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.97;ReadPosRankSum=-2.508;SOR=0.552 GT:AD:DP:GQ:PL 0/1:62,35:97:99:898,0,1653 chr1 3607265 . T C 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 3607333 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 3607352 . A C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.25;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 3607354 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.50;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 3609043 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3611380 . C G 4431.77 PASS AC=2;AF=1.00;AN=2;DP=137;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.35;SOR=1.246 GT:AD:DP:GQ:PL 1/1:0,137:137:99:4460,411,0 chr1 3611518 . T C 1186.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.90;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1215,102,0 chr1 3611973 . C A 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.253;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr1 3612277 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3612825 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3614658 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 3620798 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.08;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 3627214 . T G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.16;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 3627782 . T C 1061.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.776;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.931;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.24;ReadPosRankSum=1.686;SOR=0.399 GT:AD:DP:GQ:PL 0/1:20,30:50:99:1090,0,685 chr1 3631426 . A G 5024.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.293;ClippingRankSum=0.000;DP=392;ExcessHet=3.0103;FS=2.127;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.82;ReadPosRankSum=0.560;SOR=0.588 GT:AD:DP:GQ:PL 0/1:203,189:392:99:5053,0,5511 chr1 3631572 . T C 11180.77 PASS AC=2;AF=1.00;AN=2;DP=320;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.95;SOR=0.951 GT:AD:DP:GQ:PL 1/1:0,319:319:99:11209,958,0 chr1 3631778 . G A 1080.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.932;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=7.897;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=0.379;SOR=0.190 GT:AD:DP:GQ:PL 0/1:41,40:81:99:1109,0,1313 chr1 3631885 . A G 227.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.54;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:256,21,0 chr1 3631978 . T C 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.42;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 3633288 . G A 852.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.80;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,26:26:78:881,78,0 chr1 3636216 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.86;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 3636791 . G A 942.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.897;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=5.063;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.71;ReadPosRankSum=1.701;SOR=0.223 GT:AD:DP:GQ:PL 0/1:28,32:60:99:971,0,887 chr1 3637225 . T C 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr1 3638527 . T C 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.489;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.10;ReadPosRankSum=-0.619;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:149,0,102 chr1 3638864 . G T 1406.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.804;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=0.794;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.93;ReadPosRankSum=-0.916;SOR=0.557 GT:AD:DP:GQ:PL 0/1:43,58:101:99:1435,0,1115 chr1 3638898 . C T 733.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.794;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.95;ReadPosRankSum=-0.646;SOR=0.701 GT:AD:DP:GQ:PL 0/1:39,28:67:99:762,0,1075 chr1 3647040 . G T 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=0.566;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,137 chr1 3647667 . C G 1196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.837;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.34;ReadPosRankSum=0.796;SOR=0.545 GT:AD:DP:GQ:PL 0/1:33,36:69:99:1225,0,1067 chr1 3650142 . G A 628.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.733;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.49;ReadPosRankSum=-0.209;SOR=0.957 GT:AD:DP:GQ:PL 0/1:15,19:34:99:657,0,478 chr1 3651980 . G A 92.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:120,9,0 chr1 3669668 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3669686 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 3669719 . C T 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.084;SOR=3.258 GT:AD:DP:GQ:PL 0/1:2,4:6:31:149,0,31 chr1 3676442 . G T 142.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.40;ReadPosRankSum=-0.712;SOR=0.527 GT:AD:DP:GQ:PL 0/1:2,5:7:45:171,0,45 chr1 3682042 . A G 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=-0.253;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr1 3682336 . G A 2412.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.991;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=5.519;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.46;ReadPosRankSum=-0.107;SOR=0.977 GT:AD:DP:GQ:PL 0/1:62,62:124:99:2441,0,2840 chr1 3682346 . C T 2358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.262;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=2.296;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.18;ReadPosRankSum=-0.316;SOR=0.941 GT:AD:DP:GQ:PL 0/1:62,61:123:99:2387,0,2881 chr1 3684559 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:32:75,0,32 chr1 3695869 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3698489 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 3698518 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 3698592 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3703143 . T A 88.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:116,12,0 chr1 3705620 . A G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 3707302 . T A 820.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.18;ReadPosRankSum=-1.201;SOR=1.270 GT:AD:DP:GQ:PL 0/1:14,23:37:99:849,0,473 chr1 3709954 . A G 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr1 3710087 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3723521 . C G 431.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.137;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=18.787;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.08;ReadPosRankSum=0.701;SOR=0.948 GT:AD:DP:GQ:PL 0/1:40,21:61:99:460,0,1251 chr1 3727117 . G A 2164.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.455;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=0.535;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.04;ReadPosRankSum=-0.959;SOR=0.741 GT:AD:DP:GQ:PL 0/1:108,88:196:99:2193,0,2784 chr1 3728190 . T C 3674.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.789;ClippingRankSum=0.000;DP=285;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=0.041;SOR=0.704 GT:AD:DP:GQ:PL 0/1:139,144:283:99:3703,0,3661 chr1 3728241 . A G 3494.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.358;ClippingRankSum=0.000;DP=270;ExcessHet=3.0103;FS=0.442;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.04;ReadPosRankSum=-0.758;SOR=0.662 GT:AD:DP:GQ:PL 0/1:133,135:268:99:3523,0,3270 chr1 3728313 . A C 2313.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.391;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=2.287;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.55;ReadPosRankSum=0.156;SOR=0.513 GT:AD:DP:GQ:PL 0/1:76,83:159:99:2342,0,1923 chr1 3728488 . A G 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=-0.210;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr1 3729280 . G A 1072.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.719;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.77;ReadPosRankSum=-1.305;SOR=0.659 GT:AD:DP:GQ:PL 0/1:41,43:84:99:1101,0,1121 chr1 3730855 . G A 467.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.730;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=5.327;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.69;ReadPosRankSum=-1.725;SOR=0.185 GT:AD:DP:GQ:PL 0/1:21,19:40:99:496,0,621 chr1 3731313 . T C 745.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.790;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.84;ReadPosRankSum=0.541;SOR=0.559 GT:AD:DP:GQ:PL 0/1:36,27:63:99:774,0,1088 chr1 3731398 . T C 2191.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.136;ClippingRankSum=0.000;DP=174;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.60;ReadPosRankSum=0.289;SOR=0.721 GT:AD:DP:GQ:PL 0/1:89,85:174:99:2220,0,2467 chr1 3731704 . T C 325.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.15;ReadPosRankSum=0.577;SOR=0.793 GT:AD:DP:GQ:PL 0/1:9,10:19:99:354,0,309 chr1 3731781 . G A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=6.021;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.674;SOR=2.788 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 3732998 . G A 4019.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.542;ClippingRankSum=0.000;DP=265;ExcessHet=3.0103;FS=4.131;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.23;ReadPosRankSum=0.077;SOR=0.496 GT:AD:DP:GQ:PL 0/1:120,144:264:99:4048,0,3229 chr1 3733230 . A C 804.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.983;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.88;ReadPosRankSum=0.917;SOR=0.880 GT:AD:DP:GQ:PL 0/1:21,24:45:99:833,0,682 chr1 3733241 . A G 742.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.790;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=5.225;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.07;ReadPosRankSum=-1.347;SOR=1.733 GT:AD:DP:GQ:PL 0/1:15,22:37:99:771,0,425 chr1 3743093 . G A 3984.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.736;ClippingRankSum=0.000;DP=291;ExcessHet=3.0103;FS=2.072;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.79;ReadPosRankSum=0.024;SOR=0.572 GT:AD:DP:GQ:PL 0/1:139,150:289:99:4013,0,3753 chr1 3745509 . G A 1867.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.896;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.44;ReadPosRankSum=-0.276;SOR=0.715 GT:AD:DP:GQ:PL 0/1:60,61:121:99:1896,0,1723 chr1 3746281 . A G 1925.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.877;ClippingRankSum=0.000;DP=155;ExcessHet=3.0103;FS=3.730;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-1.320;SOR=0.462 GT:AD:DP:GQ:PL 0/1:81,74:155:99:1954,0,2275 chr1 3746493 . A T 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.207;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=-0.349;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,6:12:99:180,0,215 chr1 3752637 . A G 9610.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.105;ClippingRankSum=0.000;DP=513;ExcessHet=3.0103;FS=1.746;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.92;ReadPosRankSum=0.603;SOR=0.543 GT:AD:DP:GQ:PL 0/1:262,246:508:99:9639,0,12027 chr1 3752641 . C G 9535.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.140;ClippingRankSum=0.000;DP=522;ExcessHet=3.0103;FS=1.743;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.44;ReadPosRankSum=1.147;SOR=0.537 GT:AD:DP:GQ:PL 0/1:268,249:517:99:9564,0,12037 chr1 3756932 . T G 1130.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.251;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=5.066;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.93;ReadPosRankSum=-0.314;SOR=0.211 GT:AD:DP:GQ:PL 0/1:34,37:71:99:1159,0,1041 chr1 3761369 . T C 3512.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.869;ClippingRankSum=0.000;DP=261;ExcessHet=3.0103;FS=2.727;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.51;ReadPosRankSum=-1.106;SOR=0.547 GT:AD:DP:GQ:PL 0/1:129,131:260:99:3541,0,3340 chr1 3761657 . G C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 3762334 . A G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 3762390 . G A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 3762575 . T C 266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.801;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=3.682;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.26;ReadPosRankSum=1.248;SOR=0.442 GT:AD:DP:GQ:PL 0/1:13,13:26:99:295,0,329 chr1 3767543 . T A 711.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.14;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:740,54,0 chr1 3772285 . A G 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr1 3774700 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 3776185 . G T 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.526;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.447;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.38;ReadPosRankSum=-0.483;SOR=0.223 GT:AD:DP:GQ:PL 0/1:8,7:15:99:244,0,315 chr1 3776186 . C T 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.917;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.60;ReadPosRankSum=0.296;SOR=0.330 GT:AD:DP:GQ:PL 0/1:8,5:13:99:244,0,315 chr1 3776232 . G A 134.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.98;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:163,15,0 chr1 3776922 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3776947 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3777110 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3778591 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 3778741 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3781453 . G A 727.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.530;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=1.995;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.70;ReadPosRankSum=-1.003;SOR=0.868 GT:AD:DP:GQ:PL 0/1:39,29:68:99:756,0,1152 chr1 3781660 . G C 398.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.283;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.39;ReadPosRankSum=-1.802;SOR=0.507 GT:AD:DP:GQ:PL 0/1:19,16:35:99:427,0,536 chr1 3784887 . C T 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.842;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 3784927 . A G 623.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.48;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:652,48,0 chr1 3785016 . G C 768.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.540;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=2.134;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.36;ReadPosRankSum=1.087;SOR=0.458 GT:AD:DP:GQ:PL 0/1:61,31:92:99:797,0,1895 chr1 3785099 . T C 1563.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.188;ClippingRankSum=0.000;DP=170;ExcessHet=3.0103;FS=2.798;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.20;ReadPosRankSum=-0.164;SOR=0.930 GT:AD:DP:GQ:PL 0/1:104,66:170:99:1592,0,2748 chr1 3785258 . G A 1589.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.014;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=3.367;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.28;ReadPosRankSum=-1.180;SOR=0.371 GT:AD:DP:GQ:PL 0/1:47,45:92:99:1618,0,2888 chr1 3785268 . C A 1354.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.290;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=2.534;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.83;ReadPosRankSum=-0.453;SOR=0.403 GT:AD:DP:GQ:PL 0/1:41,35:76:99:1383,0,2747 chr1 3788662 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3796348 . C T 976.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.222;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.01;ReadPosRankSum=0.594;SOR=0.642 GT:AD:DP:GQ:PL 0/1:26,35:61:99:1005,0,630 chr1 3796533 . G T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.099;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.05;ReadPosRankSum=0.000;SOR=1.329 GT:AD:DP:GQ:PL 0/1:10,4:14:99:113,0,342 chr1 3801458 . G A 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-1.834;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr1 3801505 . C T 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.876;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=-0.076;SOR=2.179 GT:AD:DP:GQ:PL 0/1:5,6:11:99:218,0,130 chr1 3801680 . A G 238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.938;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.92;ReadPosRankSum=-1.352;SOR=0.368 GT:AD:DP:GQ:PL 0/1:6,10:16:99:267,0,168 chr1 3805724 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3806377 . C T 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.49;MQRankSum=-0.842;QD=7.95;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 3806631 . A G 283.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.60;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:312,21,0 chr1 3806639 . T C 283.80 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.39;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:21:312,21,0 chr1 3806663 . A C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 3807765 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3807808 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3808024 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3815539 . T C 8454.77 PASS AC=2;AF=1.00;AN=2;DP=261;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.52;SOR=1.241 GT:AD:DP:GQ:PL 1/1:0,260:260:99:8483,780,0 chr1 3815608 . C T 4582.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.45;SOR=2.653 GT:AD:DP:GQ:PL 1/1:0,137:137:99:4611,409,0 chr1 3815888 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 3816032 . G T 2495.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.24;SOR=3.578 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2524,201,0 chr1 3816075 . T A 3164.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.03;SOR=2.179 GT:AD:DP:GQ:PL 1/1:0,93:93:99:3193,279,0 chr1 3816143 . T C 5737.77 PASS AC=2;AF=1.00;AN=2;DP=173;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.17;SOR=1.352 GT:AD:DP:GQ:PL 1/1:0,173:173:99:5766,519,0 chr1 3816218 . T C 7327.77 PASS AC=2;AF=1.00;AN=2;DP=225;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.57;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,225:225:99:7356,676,0 chr1 3821768 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3825615 . G A 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.51;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 3825930 . C A 1508.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.457;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=1.394;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.70;ReadPosRankSum=0.492;SOR=0.829 GT:AD:DP:GQ:PL 0/1:69,60:129:99:1537,0,1894 chr1 3826545 . A G 2588.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.53;SOR=0.986 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2617,181,0 chr1 3826568 . T C 2808.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.50;SOR=1.196 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2837,199,0 chr1 3826755 . G A 4638.77 PASS AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.56;SOR=0.915 GT:AD:DP:GQ:PL 1/1:0,147:147:99:4667,441,0 chr1 3826786 . G C 4602.77 PASS AC=2;AF=1.00;AN=2;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.96;SOR=1.318 GT:AD:DP:GQ:PL 1/1:0,144:144:99:4631,432,0 chr1 3829223 . T C 2432.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.31;SOR=1.048 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2461,249,0 chr1 3829552 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3829690 . T C 1022.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.36;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1051,78,0 chr1 3830019 . G T 807.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.996;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.266;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.96;ReadPosRankSum=0.469;SOR=0.446 GT:AD:DP:GQ:PL 0/1:26,28:54:99:836,0,813 chr1 3830025 . C G 1980.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.32;SOR=2.400 GT:AD:DP:GQ:PL 1/1:0,48:48:99:2009,144,0 chr1 3831039 . T C 2143.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.37;SOR=4.029 GT:AD:DP:GQ:PL 1/1:0,57:57:99:2172,171,0 chr1 3832793 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3833603 . G A 345.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.51;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:374,27,0 chr1 3834167 . T G 251.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.59;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:280,21,0 chr1 3834895 . C A 646.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.302;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.76;ReadPosRankSum=0.993;SOR=0.793 GT:AD:DP:GQ:PL 0/1:28,27:55:99:675,0,732 chr1 3836175 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 3836293 . A G 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=2.722;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:218,0,170 chr1 3836449 . G C 295.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.732;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.38;ReadPosRankSum=1.160;SOR=0.693 GT:AD:DP:GQ:PL 0/1:12,14:26:99:324,0,399 chr1 3836467 . C T 152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.624;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.64;ReadPosRankSum=-0.714;SOR=0.569 GT:AD:DP:GQ:PL 0/1:13,10:23:99:181,0,502 chr1 3836751 . G C 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=0.728;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,262 chr1 3839111 . T C 7186.77 PASS AC=2;AF=1.00;AN=2;DP=220;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.67;SOR=1.336 GT:AD:DP:GQ:PL 1/1:0,220:220:99:7215,660,0 chr1 3839305 . T C 324.78 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.59;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:24:353,24,0 chr1 3839311 . T G 283.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.48;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:312,21,0 chr1 3839491 . A G 369.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.091;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=2.291;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.08;ReadPosRankSum=-0.490;SOR=1.445 GT:AD:DP:GQ:PL 0/1:11,12:23:99:398,0,322 chr1 3839556 . A G 723.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.354;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.248;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=0.053;SOR=0.446 GT:AD:DP:GQ:PL 0/1:20,28:48:99:752,0,611 chr1 3839755 . C T 559.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.272;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.13;ReadPosRankSum=0.423;SOR=0.600 GT:AD:DP:GQ:PL 0/1:17,20:37:99:588,0,497 chr1 3843220 . A G 3139.77 PASS AC=2;AF=1.00;AN=2;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.62;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,106:106:99:3168,318,0 chr1 3844915 . C T 3273.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.196;ClippingRankSum=0.000;DP=242;ExcessHet=3.0103;FS=0.981;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.53;ReadPosRankSum=-0.081;SOR=0.764 GT:AD:DP:GQ:PL 0/1:122,120:242:99:3302,0,3347 chr1 3845086 . A G 2494.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.17;SOR=2.271 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2523,218,0 chr1 3845516 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 3848404 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 3848415 . C A 149.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.75;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:177,12,0 chr1 3848491 . C T 420.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.990;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.04;ReadPosRankSum=0.159;SOR=0.507 GT:AD:DP:GQ:PL 0/1:7,13:20:99:449,0,232 chr1 3848985 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 3848999 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 3852469 . A T 3882.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.107;ClippingRankSum=0.000;DP=209;ExcessHet=3.0103;FS=1.200;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.67;ReadPosRankSum=-0.918;SOR=0.575 GT:AD:DP:GQ:PL 0/1:107,101:208:99:3911,0,5734 chr1 3852470 . A T 3882.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.806;ClippingRankSum=0.000;DP=209;ExcessHet=3.0103;FS=1.200;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.67;ReadPosRankSum=-0.733;SOR=0.575 GT:AD:DP:GQ:PL 0/1:107,101:208:99:3911,0,5734 chr1 3852698 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 3857566 . A G 1627.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.882;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.59;ReadPosRankSum=-1.323;SOR=0.713 GT:AD:DP:GQ:PL 0/1:27,42:69:99:1656,0,1535 chr1 3857574 . T C 1685.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.774;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.09;ReadPosRankSum=-0.484;SOR=0.764 GT:AD:DP:GQ:PL 0/1:29,44:73:99:1714,0,1566 chr1 3857732 . A G 735.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.561;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=1.430;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.87;ReadPosRankSum=0.035;SOR=0.463 GT:AD:DP:GQ:PL 0/1:13,26:39:99:764,0,380 chr1 3857748 . T C 580.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.268;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=1.938;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.36;ReadPosRankSum=1.605;SOR=0.380 GT:AD:DP:GQ:PL 0/1:10,20:30:99:609,0,323 chr1 3858890 . C G 2893.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.82;SOR=2.749 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2922,240,0 chr1 3866044 . C T 1541.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.145;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.813;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.32;ReadPosRankSum=0.042;SOR=0.848 GT:AD:DP:GQ:PL 0/1:39,50:89:99:1570,0,1156 chr1 3868811 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3869582 . C G 398.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.751;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.693;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.39;ReadPosRankSum=1.167;SOR=0.318 GT:AD:DP:GQ:PL 0/1:19,16:35:99:427,0,620 chr1 3869681 . G A 1306.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.409;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=3.624;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.77;ReadPosRankSum=-1.445;SOR=1.066 GT:AD:DP:GQ:PL 0/1:63,48:111:99:1335,0,1617 chr1 3869846 . G A 1260.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.740;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.960;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.04;ReadPosRankSum=-0.064;SOR=0.956 GT:AD:DP:GQ:PL 0/1:31,43:74:99:1289,0,822 chr1 3870012 . C G 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.035;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=1.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.42;ReadPosRankSum=-1.902;SOR=1.162 GT:AD:DP:GQ:PL 0/1:12,9:21:99:331,0,667 chr1 3870025 . T G 187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.057;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.43;ReadPosRankSum=0.320;SOR=0.619 GT:AD:DP:GQ:PL 0/1:12,6:18:99:216,0,676 chr1 3870181 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 3870623 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.126;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 3872813 . C T 1516.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.575;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.06;ReadPosRankSum=-1.799;SOR=0.756 GT:AD:DP:GQ:PL 0/1:37,47:84:99:1545,0,1137 chr1 3873098 . A G 554.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.259;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.90;ReadPosRankSum=0.223;SOR=0.906 GT:AD:DP:GQ:PL 0/1:14,17:31:99:583,0,491 chr1 3891029 . G C 5213.77 PASS AC=2;AF=1.00;AN=2;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.79;SOR=0.958 GT:AD:DP:GQ:PL 1/1:0,159:159:99:5242,477,0 chr1 3904770 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3912190 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 3924464 . G C 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr1 3928928 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 3954215 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 3954268 . G T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 3954280 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 3959115 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 3959637 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 4010556 . C T 152.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.47;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:181,18,0 chr1 4032086 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 4040244 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 4055516 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 4060439 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 4060531 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 4060534 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.07;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 4067740 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 4067769 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 4081292 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 4087901 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 4087963 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 4105944 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 4127434 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 4127761 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 4132430 . C T 75.10 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.77;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:11:103,11,0 chr1 4137927 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 4157360 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 4175623 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 4175708 . G A 288.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.25;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:33:317,33,0 chr1 4216024 . T C 111.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:139,12,0 chr1 4216133 . G C 138.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:166,12,0 chr1 4328825 . T C 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 4376848 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 4396217 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 4426035 . A G 239.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:24:268,24,0 chr1 4446265 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 4473200 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 4473212 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 4482840 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 4508840 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 4512774 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 4513074 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 4513097 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 4514077 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 4542951 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 4617475 . C G 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 4617669 . T C 145.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.18;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:174,15,0 chr1 4623650 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 4625588 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 4650421 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 4650426 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 4654263 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 4654467 . G T 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=0.967;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,4:6:31:115,0,31 chr1 4666304 . G C 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 4666394 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 4666472 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 4711993 . T C 1904.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.611;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=-0.334;SOR=0.744 GT:AD:DP:GQ:PL 0/1:70,72:142:99:1933,0,1799 chr1 4721091 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 4727059 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 4736949 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 4740972 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 4744686 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 4755417 . G A 113.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.78;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:142,15,0 chr1 4772095 . T A 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.335;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=-1.158;SOR=0.527 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,418 chr1 4774791 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 4779203 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 4785863 . G T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 4787534 . C T 1873.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.489;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=1.376;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.38;ReadPosRankSum=-0.320;SOR=0.555 GT:AD:DP:GQ:PL 0/1:72,68:140:99:1902,0,2076 chr1 4787785 . G A 10962.77 PASS AC=2;AF=1.00;AN=2;DP=331;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.12;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,331:331:99:10991,994,0 chr1 4789324 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 4794265 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 4831962 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 4831966 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 4881794 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 4979320 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 4984077 . G T 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 4984078 . G A 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 4986170 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 5021113 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 5131768 . G C 136.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.81;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:165,18,0 chr1 5151074 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 5188162 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 5227048 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 5227099 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 5233305 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 5288854 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 5291302 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 5311874 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 5368157 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 5482379 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 5484599 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 5523722 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 5523954 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 5563905 . C T 1205.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.316;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=1.908;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.89;ReadPosRankSum=1.407;SOR=0.965 GT:AD:DP:GQ:PL 0/1:40,41:81:99:1234,0,1184 chr1 5598866 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 5598873 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 5617715 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 5645218 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 5647031 . A C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 5647059 . T C 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr1 5647102 . G A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 5656544 . T C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 5656573 . A C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 5668462 . A C 32.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.79;MQRankSum=-0.967;QD=10.92;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:61,0,33 chr1 5671227 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 5671247 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 5672408 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 5672412 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 5672415 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 5672417 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 5672421 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 5674114 . T C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.92;MQRankSum=-0.431;QD=17.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:36:81,0,36 chr1 5674132 . T C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.92;MQRankSum=-0.431;QD=17.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:36:81,0,36 chr1 5674187 . A T 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.92;MQRankSum=-0.431;QD=13.92;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:36:70,0,36 chr1 5674196 . A C 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.92;MQRankSum=-0.431;QD=13.92;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:36:70,0,36 chr1 5709342 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 5739062 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 5746494 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 5748033 . A C 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-1.036;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr1 5751064 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 5798883 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 5813711 . A G 475.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.934;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=2.754;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.04;ReadPosRankSum=0.504;SOR=0.223 GT:AD:DP:GQ:PL 0/1:3,16:19:57:504,0,57 chr1 5836947 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 5837044 . G A 171.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.48;ReadPosRankSum=-0.319;SOR=0.595 GT:AD:DP:GQ:PL 0/1:1,7:8:18:200,0,18 chr1 5840973 . C A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 5841004 . T C 165.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.18;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:194,15,0 chr1 5841010 . T A 141.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.22;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:169,12,0 chr1 5844520 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 5847764 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 5862777 . C A 1686.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.980;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=0.646;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.40;ReadPosRankSum=-0.726;SOR=0.582 GT:AD:DP:GQ:PL 0/1:68,68:136:99:1715,0,1949 chr1 5863212 . G A 2084.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.208;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=0.704;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.45;ReadPosRankSum=0.439;SOR=0.825 GT:AD:DP:GQ:PL 0/1:84,71:155:99:2113,0,2447 chr1 5863728 . T G 353.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.817;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=1.357;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.83;ReadPosRankSum=0.122;SOR=1.095 GT:AD:DP:GQ:PL 0/1:21,15:36:99:382,0,531 chr1 5864679 . C T 429.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.003;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.35;ReadPosRankSum=-0.358;SOR=0.569 GT:AD:DP:GQ:PL 0/1:15,13:28:99:458,0,530 chr1 5865741 . C T 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=0.180;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,112 chr1 5866598 . G A 865.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.088;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.67;ReadPosRankSum=-0.682;SOR=0.656 GT:AD:DP:GQ:PL 0/1:30,29:59:99:894,0,940 chr1 5873599 . C A 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=0.842;SOR=0.368 GT:AD:DP:GQ:PL 0/1:2,4:6:53:115,0,53 chr1 5874430 . A G 2602.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.213;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=4.398;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.87;ReadPosRankSum=-0.427;SOR=0.727 GT:AD:DP:GQ:PL 0/1:78,97:175:99:2631,0,1992 chr1 5877031 . T C 3130.77 PASS AC=2;AF=1.00;AN=2;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.70;SOR=2.557 GT:AD:DP:GQ:PL 1/1:0,87:87:99:3159,261,0 chr1 5877108 . G A 2272.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.124;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.54;ReadPosRankSum=-0.701;SOR=0.638 GT:AD:DP:GQ:PL 0/1:116,81:197:99:2301,0,3535 chr1 5877331 . C T 10453.77 PASS AC=2;AF=1.00;AN=2;DP=327;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.17;SOR=1.440 GT:AD:DP:GQ:PL 1/1:0,325:325:99:10482,974,0 chr1 5877353 . A C 3871.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.954;ClippingRankSum=0.000;DP=270;ExcessHet=3.0103;FS=0.489;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=0.249;SOR=0.746 GT:AD:DP:GQ:PL 0/1:132,137:269:99:3900,0,3602 chr1 5879484 . T G 3436.77 PASS AC=2;AF=1.00;AN=2;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.12;SOR=1.008 GT:AD:DP:GQ:PL 1/1:0,107:107:99:3465,321,0 chr1 5881123 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 5886890 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 5888617 . G A 2380.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.14;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2409,237,0 chr1 5890770 . T C 1749.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.324;ClippingRankSum=0.000;DP=148;ExcessHet=3.0103;FS=0.747;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.82;ReadPosRankSum=2.411;SOR=0.549 GT:AD:DP:GQ:PL 0/1:85,63:148:99:1778,0,2513 chr1 5893434 . A C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.45;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 5893439 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.89;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 5893727 . G A 178.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.54;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:207,21,0 chr1 5904931 . T C 4138.77 PASS AC=2;AF=1.00;AN=2;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.58;SOR=2.978 GT:AD:DP:GQ:PL 1/1:0,115:115:99:4167,346,0 chr1 5905119 . A G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.524;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 5905764 . G C 2330.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.699;ClippingRankSum=0.000;DP=198;ExcessHet=3.0103;FS=1.104;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.77;ReadPosRankSum=0.388;SOR=0.796 GT:AD:DP:GQ:PL 0/1:110,88:198:99:2359,0,3011 chr1 5906059 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.85;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 5909402 . A G 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.589;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-1.981;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,170 chr1 5934866 . G C 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=0.524;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:31:115,0,31 chr1 5947386 . C T 216.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.42;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:245,18,0 chr1 5947756 . A G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=1.645;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 5948531 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 5949653 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 5962272 . A G 94.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0 chr1 5967107 . C A 1688.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.82;SOR=2.737 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1717,138,0 chr1 5967192 . A G 3816.77 PASS AC=2;AF=1.00;AN=2;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.90;SOR=1.188 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3845,348,0 chr1 5967490 . C T 508.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.255;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=1.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.06;ReadPosRankSum=-2.054;SOR=1.040 GT:AD:DP:GQ:PL 0/1:27,19:46:99:537,0,820 chr1 5975668 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 5977693 . G A 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 5977708 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 5978523 . G C 3415.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.96;SOR=2.882 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3444,286,0 chr1 5986372 . C G 358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.044;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=0.038;SOR=0.616 GT:AD:DP:GQ:PL 0/1:12,11:23:99:387,0,419 chr1 5994206 . C A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 5999169 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 5999899 . T C 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:101,0,30 chr1 5999926 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.95;ReadPosRankSum=-0.842;SOR=2.833 GT:AD:DP:GQ:PL 0/1:2,3:5:35:78,0,35 chr1 6012143 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 6034028 . G T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 6034075 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 6035139 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 6039279 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 6040253 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 6043419 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 6044655 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 6066080 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 6066148 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 6072986 . G C 338.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.19;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:367,27,0 chr1 6073245 . C G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 6073279 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 6073641 . C T 2376.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.049;ClippingRankSum=0.000;DP=190;ExcessHet=3.0103;FS=2.779;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.64;ReadPosRankSum=-0.672;SOR=0.959 GT:AD:DP:GQ:PL 0/1:99,89:188:99:2405,0,2832 chr1 6073918 . G T 493.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.814;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=6.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.34;ReadPosRankSum=-0.015;SOR=0.055 GT:AD:DP:GQ:PL 0/1:19,21:40:99:522,0,644 chr1 6079109 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 6084854 . A G 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.619;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.85;ReadPosRankSum=-0.854;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,2:8:59:59,0,192 chr1 6085124 . C A 4638.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.915;ClippingRankSum=0.000;DP=368;ExcessHet=3.0103;FS=4.004;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.61;ReadPosRankSum=-0.666;SOR=0.903 GT:AD:DP:GQ:PL 0/1:182,186:368:99:4667,0,4785 chr1 6085305 . A G 2194.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.109;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.63;ReadPosRankSum=-1.527;SOR=0.693 GT:AD:DP:GQ:PL 0/1:75,75:150:99:2223,0,2239 chr1 6085405 . T G 626.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.59;ReadPosRankSum=0.214;SOR=0.957 GT:AD:DP:GQ:PL 0/1:14,18:32:99:655,0,488 chr1 6091183 . G A 935.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.010;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.13;ReadPosRankSum=0.459;SOR=0.657 GT:AD:DP:GQ:PL 0/1:25,33:58:99:964,0,736 chr1 6095272 . T C 1211.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.897;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=1.970;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=0.057;SOR=0.965 GT:AD:DP:GQ:PL 0/1:53,42:95:99:1240,0,1481 chr1 6110003 . C T 494.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.726;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=1.156;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.76;ReadPosRankSum=0.986;SOR=0.446 GT:AD:DP:GQ:PL 0/1:25,21:46:99:523,0,554 chr1 6111932 . C A 8175.77 PASS AC=2;AF=1.00;AN=2;DP=255;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.06;SOR=1.491 GT:AD:DP:GQ:PL 1/1:0,255:255:99:8204,765,0 chr1 6112780 . C T 989.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.08;SOR=4.255 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1018,78,0 chr1 6112815 . G A 1761.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.07;SOR=3.702 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1790,147,0 chr1 6113589 . A G 1034.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.74;SOR=3.334 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1063,87,0 chr1 6115447 . G C 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr1 6121240 . G A 642.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.250;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=4.930;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.04;ReadPosRankSum=0.683;SOR=1.118 GT:AD:DP:GQ:PL 0/1:36,28:64:99:671,0,934 chr1 6123787 . T C 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 6124032 . A G 2320.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.13;SOR=1.352 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2349,204,0 chr1 6124132 . A G 2055.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2084,200,0 chr1 6124226 . A G 834.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.05;SOR=4.712 GT:AD:DP:GQ:PL 1/1:0,21:21:63:863,63,0 chr1 6124860 . C G 552.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.979;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=5.940;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.63;ReadPosRankSum=0.413;SOR=0.211 GT:AD:DP:GQ:PL 0/1:27,25:52:99:581,0,767 chr1 6125004 . G A 1029.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.700;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=2.898;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.81;ReadPosRankSum=-0.336;SOR=1.099 GT:AD:DP:GQ:PL 0/1:68,37:105:99:1058,0,2021 chr1 6125472 . G A 3353.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.998;ClippingRankSum=0.000;DP=245;ExcessHet=3.0103;FS=2.896;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.74;ReadPosRankSum=0.247;SOR=0.896 GT:AD:DP:GQ:PL 0/1:108,136:244:99:3382,0,2695 chr1 6128002 . A G 1052.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.469;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.83;ReadPosRankSum=1.004;SOR=0.562 GT:AD:DP:GQ:PL 0/1:38,33:71:99:1081,0,1436 chr1 6128317 . G A 1753.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.293;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.86;ReadPosRankSum=-0.330;SOR=0.693 GT:AD:DP:GQ:PL 0/1:59,59:118:99:1782,0,1859 chr1 6128486 . G A 2514.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.269;ClippingRankSum=0.000;DP=186;ExcessHet=3.0103;FS=0.575;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.52;ReadPosRankSum=2.314;SOR=0.636 GT:AD:DP:GQ:PL 0/1:101,85:186:99:2543,0,2795 chr1 6128719 . G C 2572.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.711;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=6.081;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.98;ReadPosRankSum=0.265;SOR=1.170 GT:AD:DP:GQ:PL 0/1:77,84:161:99:2601,0,2285 chr1 6130551 . A G 414.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.91;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,13:13:39:443,39,0 chr1 6134287 . T G 3318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.883;ClippingRankSum=0.000;DP=227;ExcessHet=3.0103;FS=1.666;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.62;ReadPosRankSum=0.888;SOR=0.576 GT:AD:DP:GQ:PL 0/1:101,126:227:99:3347,0,2616 chr1 6134900 . G A 2216.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.753;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=6.725;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.20;ReadPosRankSum=-0.100;SOR=1.235 GT:AD:DP:GQ:PL 0/1:92,76:168:99:2245,0,2620 chr1 6134964 . C T 3189.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.23;SOR=4.698 GT:AD:DP:GQ:PL 1/1:0,78:78:99:3218,235,0 chr1 6135149 . G A 950.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.026;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=4.617;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.32;ReadPosRankSum=1.013;SOR=0.304 GT:AD:DP:GQ:PL 0/1:48,36:84:99:979,0,1479 chr1 6135433 . G A 765.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.928;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.29;ReadPosRankSum=-0.580;SOR=0.850 GT:AD:DP:GQ:PL 0/1:22,25:47:99:794,0,641 chr1 6135488 . C T 264.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.37;ReadPosRankSum=-0.281;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,8:13:99:293,0,170 chr1 6135538 . A C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 6136433 . A G 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=0.699;SOR=2.179 GT:AD:DP:GQ:PL 0/1:5,6:11:99:218,0,176 chr1 6136457 . G A 223.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=-1.184;SOR=1.230 GT:AD:DP:GQ:PL 0/1:8,8:16:99:252,0,252 chr1 6136809 . A G 4127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.440;ClippingRankSum=0.000;DP=311;ExcessHet=3.0103;FS=5.091;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.32;ReadPosRankSum=0.299;SOR=0.692 GT:AD:DP:GQ:PL 0/1:154,156:310:99:4156,0,4128 chr1 6136883 . A G 4928.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.345;ClippingRankSum=0.000;DP=260;ExcessHet=3.0103;FS=1.541;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.96;ReadPosRankSum=0.249;SOR=0.805 GT:AD:DP:GQ:PL 0/1:131,129:260:99:4957,0,6304 chr1 6136891 . T A 4732.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.808;ClippingRankSum=0.000;DP=243;ExcessHet=3.0103;FS=0.489;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.48;ReadPosRankSum=-0.991;SOR=0.628 GT:AD:DP:GQ:PL 0/1:120,123:243:99:4761,0,6015 chr1 6137032 . A G 774.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.37;ReadPosRankSum=-1.397;SOR=0.243 GT:AD:DP:GQ:PL 0/1:19,21:40:99:803,0,876 chr1 6137047 . G A 595.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.938;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.62;ReadPosRankSum=-1.037;SOR=0.200 GT:AD:DP:GQ:PL 0/1:16,16:32:99:624,0,778 chr1 6137101 . C T 149.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.72;ReadPosRankSum=0.842;SOR=0.148 GT:AD:DP:GQ:PL 0/1:4,4:8:99:178,0,451 chr1 6137105 . G C 149.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.72;ReadPosRankSum=-0.135;SOR=0.330 GT:AD:DP:GQ:PL 0/1:3,5:8:99:178,0,451 chr1 6140825 . A C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 6144101 . G A 6042.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.354;ClippingRankSum=0.000;DP=445;ExcessHet=3.0103;FS=2.452;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.58;ReadPosRankSum=-1.103;SOR=0.891 GT:AD:DP:GQ:PL 0/1:218,227:445:99:6071,0,5911 chr1 6144206 . A G 11614.77 PASS AC=2;AF=1.00;AN=2;DP=355;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.72;SOR=1.435 GT:AD:DP:GQ:PL 1/1:0,355:355:99:11643,1065,0 chr1 6144351 . G A 838.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.310;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.51;ReadPosRankSum=-0.723;SOR=1.206 GT:AD:DP:GQ:PL 0/1:17,26:43:99:867,0,541 chr1 6147157 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 6147835 . C T 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=-0.842;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr1 6148694 . T C 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 6149303 . T C 1412.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.355;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=5.638;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.56;ReadPosRankSum=1.591;SOR=1.350 GT:AD:DP:GQ:PL 0/1:49,48:97:99:1441,0,1353 chr1 6149677 . G A 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:33:123,0,33 chr1 6149691 . T C 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:33:123,0,33 chr1 6150712 . C T 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:48:123,0,48 chr1 6150714 . A G 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:48:123,0,48 chr1 6150910 . G A 718.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.434;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=1.916;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.87;ReadPosRankSum=-0.329;SOR=0.968 GT:AD:DP:GQ:PL 0/1:48,33:81:99:747,0,1283 chr1 6151123 . G A 1077.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.622;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=3.095;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.14;ReadPosRankSum=0.487;SOR=1.119 GT:AD:DP:GQ:PL 0/1:43,39:82:99:1106,0,1185 chr1 6151280 . T C 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.79;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr1 6152296 . G A 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=0.241;SOR=1.329 GT:AD:DP:GQ:PL 0/1:6,4:10:99:137,0,186 chr1 6152348 . G A 223.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.192;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=-0.273;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,8:16:99:252,0,286 chr1 6152783 . T C 475.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.983;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.86;ReadPosRankSum=-0.896;SOR=0.327 GT:AD:DP:GQ:PL 0/1:15,15:30:99:504,0,491 chr1 6152810 . G A 287.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=-0.269;SOR=0.527 GT:AD:DP:GQ:PL 0/1:11,9:20:99:316,0,399 chr1 6152881 . G A 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=1.579;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,144 chr1 6155676 . C G 3983.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.270;ClippingRankSum=0.000;DP=293;ExcessHet=3.0103;FS=1.942;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.60;ReadPosRankSum=0.964;SOR=0.574 GT:AD:DP:GQ:PL 0/1:144,149:293:99:4012,0,3668 chr1 6167852 . G C 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:63,0,33 chr1 6177013 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 6192383 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 6197766 . T C 402.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.493;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.85;ReadPosRankSum=-0.196;SOR=0.622 GT:AD:DP:GQ:PL 0/1:16,18:34:99:431,0,450 chr1 6197796 . G A 448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.933;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.22;ReadPosRankSum=-0.428;SOR=0.627 GT:AD:DP:GQ:PL 0/1:18,22:40:99:477,0,502 chr1 6206733 . G C 1180.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.941;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.755;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.81;ReadPosRankSum=-0.718;SOR=0.861 GT:AD:DP:GQ:PL 0/1:50,50:100:99:1209,0,1366 chr1 6206934 . G C 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=0.842;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr1 6207221 . G A 160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.86;ReadPosRankSum=1.732;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,6:9:98:189,0,98 chr1 6207258 . G A 71.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.586;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.52;ReadPosRankSum=0.533;SOR=0.693 GT:AD:DP:GQ:PL 0/1:7,4:11:99:100,0,174 chr1 6212077 . A G 1970.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.694;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.08;ReadPosRankSum=-0.867;SOR=0.643 GT:AD:DP:GQ:PL 0/1:68,72:140:99:1999,0,2025 chr1 6212869 . C G 1262.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.305;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=3.845;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.30;ReadPosRankSum=-0.035;SOR=0.330 GT:AD:DP:GQ:PL 0/1:33,40:73:99:1291,0,1083 chr1 6218354 . A G 3467.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.332;ClippingRankSum=0.000;DP=265;ExcessHet=3.0103;FS=1.473;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=-0.762;SOR=0.807 GT:AD:DP:GQ:PL 0/1:135,130:265:99:3496,0,3834 chr1 6245232 . C A 1676.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.54;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1705,150,0 chr1 6245243 . C A 1710.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.54;SOR=1.094 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1739,153,0 chr1 6247195 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 6249259 . C G 527.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.351;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=7.066;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.89;ReadPosRankSum=1.267;SOR=2.303 GT:AD:DP:GQ:PL 0/1:21,17:38:99:556,0,592 chr1 6253878 . C T 4887.77 PASS AC=2;AF=1.00;AN=2;DP=142;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.42;SOR=1.373 GT:AD:DP:GQ:PL 1/1:0,142:142:99:4916,427,0 chr1 6254289 . A G 2738.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.46;SOR=4.235 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2767,217,0 chr1 6254419 . C T 1677.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.77;SOR=3.516 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1706,135,0 chr1 6254762 . T C 10096.77 PASS AC=2;AF=1.00;AN=2;DP=307;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.10;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,305:305:99:10125,915,0 chr1 6258531 . G C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 6258559 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 6260255 . G C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 6260523 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 6260648 . A G 80.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0 chr1 6260718 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 6261254 . T C 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr1 6266632 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 6295005 . G C 2364.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.552;ClippingRankSum=0.000;DP=212;ExcessHet=3.0103;FS=5.086;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.15;ReadPosRankSum=-0.691;SOR=1.065 GT:AD:DP:GQ:PL 0/1:123,89:212:99:2393,0,3519 chr1 6295561 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 6295569 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 6308766 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 6327216 . G A 168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.853;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=2.762;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.38;ReadPosRankSum=-2.523;SOR=1.536 GT:AD:DP:GQ:PL 0/1:12,6:18:99:197,0,367 chr1 6327267 . T C 382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.229;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.700;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-1.293;SOR=1.206 GT:AD:DP:GQ:PL 0/1:21,14:35:99:411,0,658 chr1 6327468 . G C 1965.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.361;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=0.588;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.52;ReadPosRankSum=-1.691;SOR=0.775 GT:AD:DP:GQ:PL 0/1:81,76:157:99:1994,0,1963 chr1 6327596 . C G 811.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.352;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=5.504;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.45;ReadPosRankSum=-0.757;SOR=0.184 GT:AD:DP:GQ:PL 0/1:15,29:44:99:840,0,424 chr1 6327724 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 6333385 . A G 1430.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.108;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.790;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.66;ReadPosRankSum=0.170;SOR=0.842 GT:AD:DP:GQ:PL 0/1:64,49:113:99:1459,0,1909 chr1 6339600 . A G 3592.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.578;ClippingRankSum=0.000;DP=260;ExcessHet=3.0103;FS=2.151;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.82;ReadPosRankSum=-0.587;SOR=0.571 GT:AD:DP:GQ:PL 0/1:118,142:260:99:3621,0,3072 chr1 6339651 . A G 2820.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.359;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=0.708;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.06;ReadPosRankSum=0.453;SOR=0.566 GT:AD:DP:GQ:PL 0/1:72,76:148:99:2849,0,2572 chr1 6339664 . T C 2607.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.659;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.76;ReadPosRankSum=0.794;SOR=0.780 GT:AD:DP:GQ:PL 0/1:66,66:132:99:2636,0,2398 chr1 6339720 . A G 957.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.445;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.42;ReadPosRankSum=-0.449;SOR=1.670 GT:AD:DP:GQ:PL 0/1:26,26:52:99:986,0,990 chr1 6339737 . C T 708.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.243;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.16;ReadPosRankSum=-0.244;SOR=1.609 GT:AD:DP:GQ:PL 0/1:19,18:37:99:737,0,741 chr1 6343108 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=1.645;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 6349593 . C G 427.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.344;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=6.368;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.84;ReadPosRankSum=-0.302;SOR=2.833 GT:AD:DP:GQ:PL 0/1:15,12:27:99:456,0,1101 chr1 6349602 . A T 459.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.429;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=3.038;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.83;ReadPosRankSum=0.562;SOR=1.961 GT:AD:DP:GQ:PL 0/1:18,13:31:99:488,0,1175 chr1 6353094 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 6360430 . T A 853.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.059;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.82;ReadPosRankSum=1.329;SOR=0.804 GT:AD:DP:GQ:PL 0/1:15,26:41:99:882,0,462 chr1 6395835 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 6413234 . A G 2060.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.265;ClippingRankSum=0.000;DP=209;ExcessHet=3.0103;FS=1.102;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.86;ReadPosRankSum=1.196;SOR=0.597 GT:AD:DP:GQ:PL 0/1:129,80:209:99:2089,0,3391 chr1 6416056 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 6429806 . C T 891.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.781;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.202;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.86;ReadPosRankSum=-0.608;SOR=0.982 GT:AD:DP:GQ:PL 0/1:29,31:60:99:920,0,827 chr1 6430165 . C A 187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.198;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=0.940;SOR=0.175 GT:AD:DP:GQ:PL 0/1:7,7:14:99:216,0,250 chr1 6440487 . G A 211.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.24;ReadPosRankSum=-0.913;SOR=0.495 GT:AD:DP:GQ:PL 0/1:9,7:16:99:240,0,328 chr1 6440859 . T C 1639.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.841;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=0.732;MLEAC=1;MLEAF=0.500;MQ=59.34;MQRankSum=-2.967;QD=15.32;ReadPosRankSum=-0.049;SOR=0.615 GT:AD:DP:GQ:PL 0/1:51,56:107:99:1668,0,1399 chr1 6448062 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 6448565 . A G 987.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.259;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=1.128;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.37;ReadPosRankSum=0.862;SOR=0.468 GT:AD:DP:GQ:PL 0/1:25,26:51:99:1016,0,1224 chr1 6448573 . G T 1053.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.010;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=3.901;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.51;ReadPosRankSum=-0.217;SOR=0.314 GT:AD:DP:GQ:PL 0/1:25,29:54:99:1082,0,1215 chr1 6448652 . T C 1240.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.408;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.814;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.43;ReadPosRankSum=0.675;SOR=0.888 GT:AD:DP:GQ:PL 0/1:43,43:86:99:1269,0,1116 chr1 6448812 . C T 459.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.426;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.130;SOR=0.671 GT:AD:DP:GQ:PL 0/1:25,18:43:99:488,0,711 chr1 6451522 . A G 2606.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.566;ClippingRankSum=0.000;DP=170;ExcessHet=3.0103;FS=9.156;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.61;ReadPosRankSum=1.951;SOR=1.597 GT:AD:DP:GQ:PL 0/1:83,84:167:99:2635,0,2054 chr1 6476406 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 6482270 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 6485330 . A T 424.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.420;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.88;ReadPosRankSum=-0.549;SOR=0.801 GT:AD:DP:GQ:PL 0/1:23,20:43:99:453,0,513 chr1 6485779 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 6490445 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 6492439 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 6496949 . A C 962.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.507;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.03;ReadPosRankSum=0.310;SOR=0.774 GT:AD:DP:GQ:PL 0/1:61,35:96:99:991,0,1782 chr1 6499744 . C T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 6508327 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 6511864 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 6518867 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 6519547 . C T 1649.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.847;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=2.686;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.00;ReadPosRankSum=1.417;SOR=0.456 GT:AD:DP:GQ:PL 0/1:45,65:110:99:1678,0,1126 chr1 6519593 . G C 721.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.461;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.23;ReadPosRankSum=-0.482;SOR=0.522 GT:AD:DP:GQ:PL 0/1:32,27:59:99:750,0,1041 chr1 6525744 . C T 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=1.732;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,179 chr1 6526010 . C T 2924.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.47;SOR=1.378 GT:AD:DP:GQ:PL 1/1:0,96:96:99:2953,288,0 chr1 6531406 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 6531464 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 6531877 . T C 1079.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.533;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=1.058;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=-0.262;SOR=0.871 GT:AD:DP:GQ:PL 0/1:49,35:84:99:1108,0,1407 chr1 6532317 . A G 1580.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.136;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=7.730;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.87;ReadPosRankSum=-1.771;SOR=0.268 GT:AD:DP:GQ:PL 0/1:54,60:114:99:1609,0,1606 chr1 6533305 . G A 2091.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.504;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=4.006;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.25;ReadPosRankSum=-1.320;SOR=0.801 GT:AD:DP:GQ:PL 0/1:119,85:204:99:2120,0,3122 chr1 6541713 . T C 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=-0.998;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:259,0,134 chr1 6542181 . C A 158.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.21;ReadPosRankSum=-1.485;SOR=0.569 GT:AD:DP:GQ:PL 0/1:7,6:13:99:187,0,263 chr1 6542213 . C G 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=0.712;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr1 6542222 . A G 270.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.07;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:299,21,0 chr1 6543091 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 6549499 . C A 546.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.64;ReadPosRankSum=0.278;SOR=0.756 GT:AD:DP:GQ:PL 0/1:15,16:31:99:575,0,582 chr1 6549791 . A G 2709.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.05;SOR=1.882 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2738,246,0 chr1 6549836 . G A 811.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.367;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=2.659;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.57;ReadPosRankSum=0.071;SOR=1.148 GT:AD:DP:GQ:PL 0/1:21,28:49:99:840,0,525 chr1 6549898 . C T 331.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.46;ReadPosRankSum=1.884;SOR=0.793 GT:AD:DP:GQ:PL 0/1:9,10:19:99:360,0,319 chr1 6550306 . T C 420.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.823;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=3.038;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.57;ReadPosRankSum=-1.205;SOR=1.961 GT:AD:DP:GQ:PL 0/1:18,13:31:99:449,0,576 chr1 6550322 . C T 566.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.905;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.91;ReadPosRankSum=-1.944;SOR=0.495 GT:AD:DP:GQ:PL 0/1:21,17:38:99:595,0,693 chr1 6554170 . G A 301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.327;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.16;ReadPosRankSum=-0.493;SOR=0.645 GT:AD:DP:GQ:PL 0/1:22,15:37:99:330,0,557 chr1 6554331 . A C 2105.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.56;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,48:48:99:2134,147,0 chr1 6554355 . A G 2463.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.66;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2492,175,0 chr1 6554475 . G A 884.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.579;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.816;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.53;ReadPosRankSum=-0.148;SOR=0.804 GT:AD:DP:GQ:PL 0/1:48,36:84:99:913,0,1161 chr1 6554593 . C G 487.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.710;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=1.086;SOR=0.681 GT:AD:DP:GQ:PL 0/1:21,17:38:99:516,0,621 chr1 6555630 . A G 1790.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=2.106;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.07;ReadPosRankSum=-0.693;SOR=1.000 GT:AD:DP:GQ:PL 0/1:38,47:85:99:1819,0,2304 chr1 6555635 . C T 1746.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.198;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=3.702;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.05;ReadPosRankSum=-0.402;SOR=1.271 GT:AD:DP:GQ:PL 0/1:38,45:83:99:1775,0,2310 chr1 6566446 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 6570024 . G A 36.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:64,6,0 chr1 6571259 . G A 996.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.741;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=2.045;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.77;ReadPosRankSum=0.107;SOR=1.364 GT:AD:DP:GQ:PL 0/1:18,30:48:99:1025,0,537 chr1 6571371 . C T 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=1.465;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,152 chr1 6575171 . A G 3850.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.919;ClippingRankSum=0.000;DP=256;ExcessHet=3.0103;FS=3.485;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.04;ReadPosRankSum=1.223;SOR=0.516 GT:AD:DP:GQ:PL 0/1:121,135:256:99:3879,0,3509 chr1 6576401 . C T 2330.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.850;ClippingRankSum=0.000;DP=199;ExcessHet=3.0103;FS=0.531;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.71;ReadPosRankSum=-1.002;SOR=0.743 GT:AD:DP:GQ:PL 0/1:107,92:199:99:2359,0,2951 chr1 6576825 . C T 2828.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.212;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=2.783;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.37;ReadPosRankSum=-0.791;SOR=1.054 GT:AD:DP:GQ:PL 0/1:93,91:184:99:2857,0,2955 chr1 6577253 . A G 586.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:615,45,0 chr1 6579787 . G T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.180;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 6586960 . T C 2017.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.233;ClippingRankSum=0.000;DP=148;ExcessHet=3.0103;FS=3.868;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.63;ReadPosRankSum=-0.524;SOR=0.945 GT:AD:DP:GQ:PL 0/1:72,76:148:99:2046,0,2043 chr1 6588220 . C G 7123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.771;ClippingRankSum=0.000;DP=561;ExcessHet=3.0103;FS=1.755;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.70;ReadPosRankSum=-0.004;SOR=0.539 GT:AD:DP:GQ:PL 0/1:294,267:561:99:7152,0,8226 chr1 6593596 . G A 4141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.065;ClippingRankSum=0.000;DP=313;ExcessHet=3.0103;FS=0.878;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.23;ReadPosRankSum=-1.877;SOR=0.750 GT:AD:DP:GQ:PL 0/1:168,145:313:99:4170,0,4816 chr1 6621684 . C T 1808.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.945;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=2.395;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.75;ReadPosRankSum=0.071;SOR=1.083 GT:AD:DP:GQ:PL 0/1:53,55:108:99:1837,0,1605 chr1 6634453 . G T 2563.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.850;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=0.824;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.91;ReadPosRankSum=0.251;SOR=0.604 GT:AD:DP:GQ:PL 0/1:52,65:117:99:2592,0,2027 chr1 6634454 . A T 2560.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.486;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=0.830;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.52;ReadPosRankSum=0.287;SOR=0.531 GT:AD:DP:GQ:PL 0/1:53,66:119:99:2589,0,2048 chr1 6634457 . C G 1377.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.490;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=1.705;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.29;ReadPosRankSum=0.459;SOR=0.958 GT:AD:DP:GQ:PL 0/1:69,53:122:99:1406,0,2677 chr1 6635742 . A G 1740.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.022;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=3.624;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.95;ReadPosRankSum=-1.116;SOR=0.973 GT:AD:DP:GQ:PL 0/1:104,71:175:99:1769,0,2729 chr1 6644575 . A G 6642.77 PASS AC=2;AF=1.00;AN=2;DP=224;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.66;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,224:224:99:6671,672,0 chr1 6645296 . A G 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=-0.847;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,140 chr1 6645814 . G C 6142.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.372;ClippingRankSum=0.000;DP=465;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.24;ReadPosRankSum=-0.820;SOR=0.709 GT:AD:DP:GQ:PL 0/1:236,228:464:99:6171,0,6174 chr1 6651916 . A C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 6758720 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 6806918 . G A 1409.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.464;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=3.884;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.84;ReadPosRankSum=-0.175;SOR=1.258 GT:AD:DP:GQ:PL 0/1:44,45:89:99:1438,0,1297 chr1 6825226 . T C 799.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.247;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=3.941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.79;ReadPosRankSum=-0.456;SOR=1.362 GT:AD:DP:GQ:PL 0/1:28,30:58:99:828,0,681 chr1 6940402 . A T 393.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.999;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=1.922;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.69;ReadPosRankSum=-0.295;SOR=1.329 GT:AD:DP:GQ:PL 0/1:6,14:20:99:422,0,122 chr1 6941550 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 6950799 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 6962506 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 6962752 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 7009192 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 7011355 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 7034218 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 7034365 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 7039206 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 7051829 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 7052687 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 7053002 . T G 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=-0.084;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,115 chr1 7095194 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 7106971 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 7111626 . C G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 7222774 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 7229546 . T G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.28;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 7229552 . T G 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.21;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr1 7229559 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.98;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 7229717 . G A 957.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.292;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=2.439;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.51;ReadPosRankSum=0.416;SOR=0.486 GT:AD:DP:GQ:PL 0/1:17,41:58:99:986,0,367 chr1 7229899 . A G 247.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.24;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:276,21,0 chr1 7256286 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 7256895 . A G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:74:81,0,74 chr1 7256897 . G C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:74:81,0,74 chr1 7309586 . G A 155.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.92;QD=31.18;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:184,15,0 chr1 7309605 . C T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.92;MQRankSum=0.253;QD=9.55;ReadPosRankSum=0.674;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 7343642 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 7351991 . A G 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr1 7355725 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 7355727 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 7371276 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 7371601 . T G 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.253;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr1 7376701 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 7388584 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 7388589 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.26;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 7404967 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 7405116 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 7419713 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 7420310 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 7426257 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 7467764 . C T 389.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.269;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.51;ReadPosRankSum=-0.692;SOR=0.878 GT:AD:DP:GQ:PL 0/1:26,15:41:99:418,0,764 chr1 7474404 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 7477070 . G T 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 7478354 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 7478377 . T C 149.03 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.93;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:12:177,12,0 chr1 7478397 . T C 149.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.14;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:177,12,0 chr1 7513631 . A T 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr1 7534699 . A G 856.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.06;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,22:22:66:885,66,0 chr1 7535173 . G A 259.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:288,24,0 chr1 7536912 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 7549444 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 7550521 . T C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.000;SOR=0.859 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 7550779 . C G 38.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr1 7608286 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 7631950 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 7632021 . G T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 7640292 . G C 1170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.512;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=2.007;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.73;ReadPosRankSum=-1.340;SOR=1.251 GT:AD:DP:GQ:PL 0/1:40,30:70:99:1199,0,2816 chr1 7640293 . G A 1170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.515;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=2.015;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.82;ReadPosRankSum=-1.302;SOR=1.270 GT:AD:DP:GQ:PL 0/1:42,32:74:99:1199,0,2816 chr1 7640614 . C T 2303.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.655;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=1.512;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.87;ReadPosRankSum=0.072;SOR=0.869 GT:AD:DP:GQ:PL 0/1:101,78:179:99:2332,0,3139 chr1 7657582 . C A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.38;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 7657587 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.44;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 7663897 . G A 5146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.668;ClippingRankSum=0.000;DP=330;ExcessHet=3.0103;FS=1.835;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=2.346;SOR=0.813 GT:AD:DP:GQ:PL 0/1:145,185:330:99:5175,0,3937 chr1 7665795 . A G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 7670829 . G A 1505.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.676;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=1.025;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.21;ReadPosRankSum=-2.087;SOR=0.889 GT:AD:DP:GQ:PL 0/1:55,51:106:99:1534,0,1629 chr1 7671816 . T C 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.180;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,112 chr1 7672136 . G T 2510.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.257;ClippingRankSum=0.000;DP=199;ExcessHet=3.0103;FS=1.098;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.62;ReadPosRankSum=1.697;SOR=0.791 GT:AD:DP:GQ:PL 0/1:98,101:199:99:2539,0,2455 chr1 7677342 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-1.036;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 7677891 . T C 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.84;ReadPosRankSum=-0.152;SOR=0.976 GT:AD:DP:GQ:PL 0/1:6,8:14:99:292,0,208 chr1 7685073 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 7689814 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 7691329 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 7698802 . C G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.07;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 7732351 . C T 2652.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.45;SOR=2.395 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2681,231,0 chr1 7736581 . A G 1944.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.96;SOR=1.903 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1973,177,0 chr1 7737474 . C T 5691.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.478;ClippingRankSum=0.000;DP=423;ExcessHet=3.0103;FS=0.521;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=0.593;SOR=0.698 GT:AD:DP:GQ:PL 0/1:216,206:422:99:5720,0,5988 chr1 7737674 . T A 4211.77 PASS AC=2;AF=1.00;AN=2;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.56;SOR=1.791 GT:AD:DP:GQ:PL 1/1:0,108:108:99:4240,325,0 chr1 7745148 . G T 373.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.15;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,12:12:35:402,35,0 chr1 7747837 . A G 3759.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.82;SOR=1.207 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3788,366,0 chr1 7747971 . G T 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=0.132;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,137 chr1 7750954 . G A 1501.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.95;SOR=2.352 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1530,141,0 chr1 7751155 . A G 3079.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.48;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3108,276,0 chr1 7752338 . A G 597.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.87;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:626,45,0 chr1 7766287 . C T 393.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.742;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.58;ReadPosRankSum=0.729;SOR=0.653 GT:AD:DP:GQ:PL 0/1:19,15:34:99:422,0,509 chr1 7771292 . C A 536.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.537;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=4.590;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.42;ReadPosRankSum=-0.564;SOR=0.255 GT:AD:DP:GQ:PL 0/1:18,22:40:99:565,0,479 chr1 7772229 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 7779345 . G T 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=0.732;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:98:185,0,98 chr1 7785635 . T C 1471.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1500,138,0 chr1 7798865 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 7801008 . A G 168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.853;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.38;ReadPosRankSum=0.279;SOR=0.512 GT:AD:DP:GQ:PL 0/1:12,6:18:99:197,0,347 chr1 7801244 . T C 377.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.45;ReadPosRankSum=0.688;SOR=0.631 GT:AD:DP:GQ:PL 0/1:19,14:33:99:406,0,577 chr1 7801285 . G A 248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.959;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=1.242;SOR=1.302 GT:AD:DP:GQ:PL 0/1:11,8:19:99:277,0,390 chr1 7802839 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 7803884 . T G 1123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.102;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=1.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.61;ReadPosRankSum=1.220;SOR=0.456 GT:AD:DP:GQ:PL 0/1:34,38:72:99:1152,0,1076 chr1 7803970 . G A 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=-0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr1 7808665 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.76;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 7809673 . C T 46.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:21:75,0,21 chr1 7809855 . G C 2642.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.32;SOR=2.043 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2671,231,0 chr1 7809988 . T C 1991.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.685;ClippingRankSum=0.000;DP=167;ExcessHet=3.0103;FS=1.216;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.07;ReadPosRankSum=-0.830;SOR=0.824 GT:AD:DP:GQ:PL 0/1:86,79:165:99:2020,0,2162 chr1 7810084 . A C 3277.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.13;SOR=1.586 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3306,306,0 chr1 7810655 . A C 1529.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.362;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=9.358;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.34;ReadPosRankSum=-1.663;SOR=1.663 GT:AD:DP:GQ:PL 0/1:71,53:124:99:1558,0,2102 chr1 7819879 . G A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.440;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,104 chr1 7820409 . A G 1270.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.68;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,30:30:93:1299,93,0 chr1 7820419 . C G 612.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.380;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.13;ReadPosRankSum=0.372;SOR=0.818 GT:AD:DP:GQ:PL 0/1:18,20:38:99:641,0,538 chr1 7820727 . C G 878.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.261;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=1.115;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.95;ReadPosRankSum=1.311;SOR=0.910 GT:AD:DP:GQ:PL 0/1:31,32:63:99:907,0,854 chr1 7827188 . G A 2130.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.217;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=11.892;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.46;ReadPosRankSum=-0.202;SOR=0.317 GT:AD:DP:GQ:PL 0/1:86,85:171:99:2159,0,2220 chr1 7827433 . T C 6828.77 PASS AC=2;AF=1.00;AN=2;DP=208;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.99;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,207:207:99:6857,622,0 chr1 7827545 . G A 3318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.112;ClippingRankSum=0.000;DP=238;ExcessHet=3.0103;FS=2.227;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.18;ReadPosRankSum=-2.015;SOR=0.544 GT:AD:DP:GQ:PL 0/1:108,126:234:99:3347,0,3017 chr1 7828098 . T C 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr1 7829744 . C G 1439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.266;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.36;ReadPosRankSum=-0.205;SOR=0.801 GT:AD:DP:GQ:PL 0/1:40,48:88:99:1468,0,1088 chr1 7829887 . A G 3481.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.416;ClippingRankSum=0.000;DP=243;ExcessHet=3.0103;FS=1.558;MLEAC=1;MLEAF=0.500;MQ=59.71;MQRankSum=2.199;QD=14.33;ReadPosRankSum=-0.471;SOR=0.810 GT:AD:DP:GQ:PL 0/1:111,132:243:99:3510,0,3146 chr1 7830204 . A G 2815.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.770;ClippingRankSum=0.000;DP=172;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.37;ReadPosRankSum=-0.043;SOR=0.691 GT:AD:DP:GQ:PL 0/1:72,100:172:99:2844,0,1832 chr1 7836012 . T C 617.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.651;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.44;ReadPosRankSum=0.203;SOR=0.646 GT:AD:DP:GQ:PL 0/1:16,24:40:99:646,0,472 chr1 7846416 . G T 4827.77 PASS AC=2;AF=1.00;AN=2;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=1.362 GT:AD:DP:GQ:PL 1/1:0,144:144:99:4856,432,0 chr1 7846947 . G A 839.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.040;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.84;ReadPosRankSum=-0.477;SOR=0.821 GT:AD:DP:GQ:PL 0/1:23,30:53:99:868,0,605 chr1 7849677 . C T 1522.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.10;SOR=1.464 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1551,138,0 chr1 7851182 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 7860363 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 7900087 . T C 57.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:85,9,0 chr1 7921065 . G A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-0.385;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 7938903 . T G 4291.77 PASS AC=2;AF=1.00;AN=2;DP=126;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.06;SOR=2.157 GT:AD:DP:GQ:PL 1/1:0,126:126:99:4320,378,0 chr1 7941904 . A G 54.52 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 7942371 . C T 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.63;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:98:98,0,110 chr1 7942584 . C G 127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.421;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.56;ReadPosRankSum=-1.465;SOR=0.693 GT:AD:DP:GQ:PL 0/1:16,7:23:99:156,0,414 chr1 7965663 . A C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.524;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 7969434 . T G 784.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.169;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.77;ReadPosRankSum=-0.456;SOR=0.627 GT:AD:DP:GQ:PL 0/1:23,34:57:99:813,0,569 chr1 7969449 . G A 640.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.253;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.93;ReadPosRankSum=1.220;SOR=0.487 GT:AD:DP:GQ:PL 0/1:20,26:46:99:669,0,484 chr1 7969450 . G A 1700.73 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.21;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1738,141,0 chr1 7970994 . G A 3330.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.094;ClippingRankSum=0.000;DP=259;ExcessHet=3.0103;FS=3.419;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.91;ReadPosRankSum=0.022;SOR=0.687 GT:AD:DP:GQ:PL 0/1:130,128:258:99:3359,0,3241 chr1 8004497 . A G 400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.035;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.83;ReadPosRankSum=0.570;SOR=0.673 GT:AD:DP:GQ:PL 0/1:20,17:37:99:429,0,522 chr1 8013869 . G T 2513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.865;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=2.629;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.97;ReadPosRankSum=-0.029;SOR=0.924 GT:AD:DP:GQ:PL 0/1:88,92:180:99:2542,0,2611 chr1 8015693 . C T 407.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.46;ReadPosRankSum=-0.200;SOR=1.292 GT:AD:DP:GQ:PL 0/1:7,12:19:99:436,0,235 chr1 8023991 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 8026467 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 8057507 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.253;SOR=2.833 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 8061762 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8061768 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8091602 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 8108504 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8108505 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8129149 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 8130513 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 8130647 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 8150890 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 8178018 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 8178080 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 8201333 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 8213491 . C T 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr1 8223958 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8223959 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8223999 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 8224091 . C G 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr1 8224092 . A G 87.28 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.02;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:9:115,9,0 chr1 8224100 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8224121 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8224190 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 8249588 . T C 111.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:140,15,0 chr1 8262533 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8262543 . G A 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr1 8275972 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8275977 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8276004 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 8307315 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8307318 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8314593 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8314598 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8314646 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8314652 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8314685 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 8314756 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.46;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 8314780 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.51;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 8314815 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8314824 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8324208 . T C 3045.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.46;SOR=1.167 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3074,300,0 chr1 8329882 . A G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=6.021;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=2.788 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 8329948 . A G 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=-1.068;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,140 chr1 8329991 . G A 232.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.020;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=3.256;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.63;ReadPosRankSum=0.954;SOR=0.105 GT:AD:DP:GQ:PL 0/1:6,8:14:99:261,0,208 chr1 8330186 . T C 1529.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.782;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=2.814;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.77;ReadPosRankSum=-1.182;SOR=0.439 GT:AD:DP:GQ:PL 0/1:42,55:97:99:1558,0,1176 chr1 8330435 . A G 9580.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.614;ClippingRankSum=0.000;DP=316;ExcessHet=3.0103;FS=4.241;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.32;ReadPosRankSum=-1.449;SOR=1.105 GT:AD:DP:GQ:PL 1/1:1,315:316:99:9609,922,0 chr1 8330828 . G A 3017.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.027;ClippingRankSum=0.000;DP=269;ExcessHet=3.0103;FS=1.480;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.26;ReadPosRankSum=-0.094;SOR=0.602 GT:AD:DP:GQ:PL 0/1:155,113:268:99:3046,0,4167 chr1 8335285 . G A 745.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.277;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=2.899;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.86;ReadPosRankSum=-1.098;SOR=1.702 GT:AD:DP:GQ:PL 0/1:35,23:58:99:774,0,1271 chr1 8337579 . T C 457.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.92;QD=31.10;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:486,36,0 chr1 8337743 . C T 4901.77 PASS AC=2;AF=1.00;AN=2;DP=148;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.12;SOR=1.562 GT:AD:DP:GQ:PL 1/1:0,148:148:99:4930,444,0 chr1 8338774 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 8339795 . G A 380.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.157;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=1.269;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.86;ReadPosRankSum=-0.216;SOR=0.477 GT:AD:DP:GQ:PL 0/1:25,18:43:99:409,0,711 chr1 8344109 . T A 363.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.07;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,11:11:33:392,33,0 chr1 8349079 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 8358584 . C A 5669.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.34;SOR=1.170 GT:AD:DP:GQ:PL 1/1:0,125:125:99:5698,382,0 chr1 8358590 . T C 5614.77 PASS AC=2;AF=1.00;AN=2;DP=126;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.93;SOR=1.234 GT:AD:DP:GQ:PL 1/1:0,126:126:99:5643,379,0 chr1 8361032 . C T 842.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.236;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.24;ReadPosRankSum=0.007;SOR=0.648 GT:AD:DP:GQ:PL 0/1:41,34:75:99:871,0,1127 chr1 8361143 . T C 2505.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.86;SOR=1.288 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2534,222,0 chr1 8362616 . T C 4498.77 PASS AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.46;SOR=1.260 GT:AD:DP:GQ:PL 1/1:0,143:143:99:4527,428,0 chr1 8403116 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 8429380 . T C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 8466082 . G A 3965.77 PASS AC=2;AF=1.00;AN=2;DP=130;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.51;SOR=0.966 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3994,390,0 chr1 8497260 . C G 2051.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.40;SOR=3.952 GT:AD:DP:GQ:PL 1/1:0,55:55:99:2080,165,0 chr1 8497631 . A C 2915.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.62;SOR=3.528 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2944,237,0 chr1 8556779 . T G 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr1 8638988 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 8639020 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 8685417 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 8698735 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 8778672 . G A 109.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:138,15,0 chr1 8795994 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8795999 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8796004 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 8813668 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 8836658 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 8864223 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.68;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 8865053 . T C 343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.92;ReadPosRankSum=-2.261;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,10:15:99:372,0,164 chr1 8865870 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 8866693 . T C 2466.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.78;SOR=8.255 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2495,183,0 chr1 8866809 . C T 137.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=5.756;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.84;ReadPosRankSum=0.284;SOR=0.651 GT:AD:DP:GQ:PL 0/1:9,5:14:99:166,0,331 chr1 8868066 . G T 993.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.736;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.84;ReadPosRankSum=0.945;SOR=0.741 GT:AD:DP:GQ:PL 0/1:60,41:101:99:1022,0,1552 chr1 8870310 . T C 2941.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.61;SOR=1.450 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2970,255,0 chr1 8870326 . G A 3345.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.80;SOR=1.212 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3374,306,0 chr1 8871404 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 8875090 . A G 710.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.05;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:739,54,0 chr1 8893698 . A G 229.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.494;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=5.497;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.32;ReadPosRankSum=0.280;SOR=2.419 GT:AD:DP:GQ:PL 0/1:7,8:15:99:258,0,167 chr1 8894471 . C G 122.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.24;MQRankSum=-0.489;QD=15.35;ReadPosRankSum=1.611;SOR=0.330 GT:AD:DP:GQ:PL 0/1:3,5:8:99:151,0,101 chr1 8922212 . C T 88.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:116,12,0 chr1 8922246 . G C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 8931242 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 8949155 . C T 1188.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.094;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=1.400;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.29;ReadPosRankSum=-1.264;SOR=0.450 GT:AD:DP:GQ:PL 0/1:27,38:65:99:1217,0,864 chr1 8949347 . C T 3489.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.039;ClippingRankSum=0.000;DP=270;ExcessHet=3.0103;FS=9.472;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.93;ReadPosRankSum=-0.225;SOR=0.736 GT:AD:DP:GQ:PL 0/1:142,128:270:99:3518,0,3848 chr1 8949385 . A C 3653.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.421;ClippingRankSum=0.000;DP=281;ExcessHet=3.0103;FS=3.940;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.00;ReadPosRankSum=0.492;SOR=0.823 GT:AD:DP:GQ:PL 0/1:146,135:281:99:3682,0,3823 chr1 8949647 . C T 299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.06;ReadPosRankSum=0.375;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,9:13:99:328,0,126 chr1 8951478 . G A 4478.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.037;ClippingRankSum=0.000;DP=367;ExcessHet=3.0103;FS=2.243;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.20;ReadPosRankSum=-0.442;SOR=0.820 GT:AD:DP:GQ:PL 0/1:195,172:367:99:4507,0,5277 chr1 8951527 . T G 4845.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.196;ClippingRankSum=0.000;DP=426;ExcessHet=3.0103;FS=0.520;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.38;ReadPosRankSum=0.485;SOR=0.724 GT:AD:DP:GQ:PL 0/1:232,194:426:99:4874,0,5958 chr1 8951663 . G T 2855.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.199;ClippingRankSum=0.000;DP=222;ExcessHet=3.0103;FS=1.809;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.86;ReadPosRankSum=1.078;SOR=0.567 GT:AD:DP:GQ:PL 0/1:113,109:222:99:2884,0,3166 chr1 8957032 . C T 1885.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.312;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=3.336;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.05;ReadPosRankSum=-0.359;SOR=1.347 GT:AD:DP:GQ:PL 0/1:43,56:99:99:1914,0,1378 chr1 8959162 . T C 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.192;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.11;ReadPosRankSum=0.736;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,8:16:99:286,0,262 chr1 8967840 . G T 2703.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.384;ClippingRankSum=0.000;DP=215;ExcessHet=3.0103;FS=1.919;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.58;ReadPosRankSum=-0.278;SOR=0.526 GT:AD:DP:GQ:PL 0/1:113,102:215:99:2732,0,3127 chr1 9007083 . G A 793.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.35;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:822,60,0 chr1 9009872 . T C 231.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.18;ReadPosRankSum=-1.001;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,7:10:95:260,0,95 chr1 9010426 . T A 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.79;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 9013320 . G A 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.842;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,145 chr1 9013424 . C A 880.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.007;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.57;ReadPosRankSum=-0.837;SOR=2.049 GT:AD:DP:GQ:PL 0/1:20,25:45:99:909,0,639 chr1 9013742 . C T 4520.77 PASS AC=2;AF=1.00;AN=2;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.24;SOR=2.134 GT:AD:DP:GQ:PL 1/1:0,136:136:99:4549,408,0 chr1 9014802 . C T 1823.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.565;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=1.505;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.36;ReadPosRankSum=0.059;SOR=0.900 GT:AD:DP:GQ:PL 0/1:58,69:127:99:1852,0,1541 chr1 9014873 . G A 1961.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.20;SOR=3.830 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1990,156,0 chr1 9015310 . G C 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=0.812;SOR=1.022 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,189 chr1 9017997 . G A 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr1 9018014 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 9019095 . C T 975.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.769;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=6.240;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.74;ReadPosRankSum=-0.933;SOR=0.050 GT:AD:DP:GQ:PL 0/1:31,31:62:99:1004,0,1108 chr1 9023329 . C T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.62;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 9024865 . T C 5418.77 PASS AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.89;SOR=4.055 GT:AD:DP:GQ:PL 1/1:0,143:143:99:5447,430,0 chr1 9028965 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 9032753 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 9032861 . C T 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.842;SOR=2.245 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr1 9038171 . C T 385.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.675;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.43;ReadPosRankSum=0.195;SOR=0.569 GT:AD:DP:GQ:PL 0/1:13,12:25:99:414,0,434 chr1 9047790 . G T 1477.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.570;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=2.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.68;ReadPosRankSum=-0.285;SOR=1.036 GT:AD:DP:GQ:PL 0/1:56,52:108:99:1506,0,1502 chr1 9057312 . A G 638.73 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.645;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.03;ReadPosRankSum=0.385;SOR=3.258 GT:AD:DP:GQ:PL 1/1:1,21:22:54:676,54,0 chr1 9058537 . C A 552.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.23;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:581,42,0 chr1 9060966 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 9061085 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 9061139 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 9061448 . T A 55.03 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=13.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:83,12,0 chr1 9061478 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 9069808 . G A 248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.084;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.58;ReadPosRankSum=0.972;SOR=0.818 GT:AD:DP:GQ:PL 0/1:7,8:15:99:277,0,230 chr1 9104141 . G A 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-0.792;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr1 9105626 . G A 4709.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.472;ClippingRankSum=0.000;DP=344;ExcessHet=3.0103;FS=6.362;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.69;ReadPosRankSum=-0.636;SOR=0.454 GT:AD:DP:GQ:PL 0/1:166,178:344:99:4738,0,4114 chr1 9106285 . C T 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=0.000;SOR=1.492 GT:AD:DP:GQ:PL 0/1:3,4:7:70:112,0,70 chr1 9106413 . T C 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=0.524;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr1 9108515 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 9109660 . C T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.126;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr1 9109683 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 9110878 . T C 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-1.345;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr1 9111179 . G T 3373.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.042;ClippingRankSum=0.000;DP=288;ExcessHet=3.0103;FS=2.550;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.71;ReadPosRankSum=-0.512;SOR=0.798 GT:AD:DP:GQ:PL 0/1:156,132:288:99:3402,0,4155 chr1 9122082 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 9122096 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 9128817 . T C 2974.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.545;ClippingRankSum=0.000;DP=199;ExcessHet=3.0103;FS=2.774;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=-0.093;SOR=0.512 GT:AD:DP:GQ:PL 0/1:96,103:199:99:3003,0,2804 chr1 9128908 . G C 1566.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.323;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=7.671;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.34;ReadPosRankSum=0.233;SOR=1.789 GT:AD:DP:GQ:PL 0/1:32,49:81:99:1595,0,922 chr1 9129293 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 9129298 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 9144717 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 9146298 . C T 35.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.751;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.97;ReadPosRankSum=1.242;SOR=0.593 GT:AD:DP:GQ:PL 0/1:6,3:9:64:64,0,189 chr1 9210061 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 9244672 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 9246790 . T C 1898.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.718;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=4.716;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.69;ReadPosRankSum=-1.254;SOR=1.262 GT:AD:DP:GQ:PL 0/1:60,61:121:99:1927,0,1821 chr1 9247839 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 9247955 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 9247978 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 9261182 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 9264154 . C T 3373.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.506;ClippingRankSum=0.000;DP=246;ExcessHet=3.0103;FS=9.010;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.71;ReadPosRankSum=-2.352;SOR=0.649 GT:AD:DP:GQ:PL 0/1:123,123:246:99:3402,0,3480 chr1 9264512 . T C 2367.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.656;ClippingRankSum=0.000;DP=200;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.84;ReadPosRankSum=-0.023;SOR=0.732 GT:AD:DP:GQ:PL 0/1:112,88:200:99:2396,0,3112 chr1 9264611 . A G 3273.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.640;ClippingRankSum=0.000;DP=251;ExcessHet=3.0103;FS=1.551;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.04;ReadPosRankSum=-1.847;SOR=0.596 GT:AD:DP:GQ:PL 0/1:132,119:251:99:3302,0,3920 chr1 9281567 . G A 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=-1.645;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr1 9281635 . G A 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=-1.981;SOR=0.180 GT:AD:DP:GQ:PL 0/1:2,5:7:63:120,0,63 chr1 9281691 . C T 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=1.834;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,4:6:66:115,0,66 chr1 9281727 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 9292749 . G T 133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.29;ReadPosRankSum=1.282;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,4:6:80:162,0,80 chr1 9293063 . C G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=1.150;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 9293105 . G T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 9293872 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 9352551 . G T 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 9352728 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 9356092 . G A 5457.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.227;ClippingRankSum=0.000;DP=459;ExcessHet=3.0103;FS=1.756;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.89;ReadPosRankSum=-0.069;SOR=0.817 GT:AD:DP:GQ:PL 0/1:253,206:459:99:5486,0,7034 chr1 9356793 . A G 939.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.167;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=1.071;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.24;ReadPosRankSum=-0.100;SOR=0.970 GT:AD:DP:GQ:PL 0/1:38,33:71:99:968,0,1066 chr1 9356903 . G A 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.842;SOR=0.223 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 9377092 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 9383281 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 9424619 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 9494145 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 9494152 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 9495108 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 9495139 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 9519905 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 9540728 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 9567045 . G A 221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.385;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=5.229;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.18;ReadPosRankSum=0.264;SOR=3.383 GT:AD:DP:GQ:PL 0/1:3,7:10:94:250,0,94 chr1 9567463 . A G 1809.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.390;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=0.602;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.45;ReadPosRankSum=-0.359;SOR=0.617 GT:AD:DP:GQ:PL 0/1:86,72:158:99:1838,0,2132 chr1 9573665 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 9588910 . C A 157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.003;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.27;ReadPosRankSum=-0.849;SOR=0.694 GT:AD:DP:GQ:PL 0/1:5,9:14:99:186,0,119 chr1 9598407 . T G 8616.77 PASS AC=2;AF=1.00;AN=2;DP=249;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.61;SOR=2.218 GT:AD:DP:GQ:PL 1/1:0,249:249:99:8645,748,0 chr1 9598649 . G A 2931.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.225;ClippingRankSum=0.000;DP=217;ExcessHet=3.0103;FS=10.204;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.51;ReadPosRankSum=1.054;SOR=1.447 GT:AD:DP:GQ:PL 0/1:116,101:217:99:2960,0,3216 chr1 9598751 . A G 1549.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.38;SOR=5.943 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1578,117,0 chr1 9601003 . A G 628.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.09;SOR=2.419 GT:AD:DP:GQ:PL 1/1:0,19:19:57:657,57,0 chr1 9601610 . G A 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=0.319;SOR=1.329 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr1 9604763 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 9604764 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 9610425 . T A 2755.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.42;SOR=1.233 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2784,255,0 chr1 9610776 . C T 1632.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.367;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=2.414;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.27;ReadPosRankSum=-0.134;SOR=0.972 GT:AD:DP:GQ:PL 0/1:62,61:123:99:1661,0,1669 chr1 9611657 . C G 1609.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.455;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=1.263;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.31;ReadPosRankSum=-0.191;SOR=0.498 GT:AD:DP:GQ:PL 0/1:43,50:93:99:1638,0,1397 chr1 9612033 . G A 622.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.342;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.32;ReadPosRankSum=-0.744;SOR=1.143 GT:AD:DP:GQ:PL 0/1:14,20:34:99:651,0,414 chr1 9631917 . C G 105.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 9654119 . G A 9473.77 PASS AC=2;AF=1.00;AN=2;DP=283;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.48;SOR=0.988 GT:AD:DP:GQ:PL 1/1:0,283:283:99:9502,848,0 chr1 9654481 . T G 1391.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.041;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=1.177;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.18;ReadPosRankSum=-1.366;SOR=1.026 GT:AD:DP:GQ:PL 0/1:44,37:81:99:1420,0,2703 chr1 9710807 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 9715402 . G A 849.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.241;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=2.034;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.08;ReadPosRankSum=1.501;SOR=0.330 GT:AD:DP:GQ:PL 0/1:20,27:47:99:878,0,655 chr1 9716281 . A G 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 9719813 . T C 1067.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.395;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.875;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.80;ReadPosRankSum=-1.666;SOR=1.364 GT:AD:DP:GQ:PL 0/1:27,33:60:99:1096,0,835 chr1 9721585 . C T 1342.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.633;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.798;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=-1.807;SOR=0.585 GT:AD:DP:GQ:PL 0/1:52,48:100:99:1371,0,1465 chr1 9722708 . C T 433.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.015;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=2.931;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.84;ReadPosRankSum=0.016;SOR=0.323 GT:AD:DP:GQ:PL 0/1:22,18:40:99:462,0,582 chr1 9724365 . C T 1285.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.693;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=0.665;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.18;ReadPosRankSum=0.062;SOR=0.775 GT:AD:DP:GQ:PL 0/1:87,53:140:99:1314,0,2530 chr1 9725135 . G A 1016.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.295;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.87;ReadPosRankSum=1.077;SOR=0.355 GT:AD:DP:GQ:PL 0/1:48,31:79:99:1045,0,1754 chr1 9726787 . G C 1697.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.153;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=0.719;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=-1.484;SOR=0.825 GT:AD:DP:GQ:PL 0/1:65,61:126:99:1726,0,1846 chr1 9731581 . G A 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=2.533;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=-1.408;SOR=1.518 GT:AD:DP:GQ:PL 0/1:5,7:12:99:256,0,173 chr1 9734247 . C T 858.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.156;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.67;ReadPosRankSum=0.309;SOR=0.420 GT:AD:DP:GQ:PL 0/1:18,28:46:99:887,0,577 chr1 9734924 . C T 1890.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.117;ClippingRankSum=0.000;DP=186;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.17;ReadPosRankSum=0.393;SOR=0.714 GT:AD:DP:GQ:PL 0/1:112,74:186:99:1919,0,3202 chr1 9735192 . G A 2447.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.094;ClippingRankSum=0.000;DP=189;ExcessHet=3.0103;FS=1.905;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=1.950;SOR=0.859 GT:AD:DP:GQ:PL 0/1:100,89:189:99:2476,0,2854 chr1 9735661 . C T 1541.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.325;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.994;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.58;ReadPosRankSum=1.348;SOR=0.892 GT:AD:DP:GQ:PL 0/1:43,50:93:99:1570,0,1328 chr1 9741283 . G A 3683.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.433;ClippingRankSum=0.000;DP=261;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.11;ReadPosRankSum=1.142;SOR=0.704 GT:AD:DP:GQ:PL 0/1:124,137:261:99:3712,0,3233 chr1 9744635 . C T 2544.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.766;ClippingRankSum=0.000;DP=170;ExcessHet=3.0103;FS=3.301;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.06;ReadPosRankSum=0.825;SOR=0.994 GT:AD:DP:GQ:PL 0/1:80,89:169:99:2573,0,2453 chr1 9751377 . A G 450.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.47;ReadPosRankSum=-0.318;SOR=1.230 GT:AD:DP:GQ:PL 0/1:8,13:21:99:479,0,271 chr1 9751483 . A G 1637.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.975;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=3.944;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.62;ReadPosRankSum=0.495;SOR=0.398 GT:AD:DP:GQ:PL 0/1:51,61:112:99:1666,0,1419 chr1 9754906 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 9755314 . G A 433.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.518;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=11.903;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.72;ReadPosRankSum=0.541;SOR=3.556 GT:AD:DP:GQ:PL 0/1:23,14:37:99:462,0,677 chr1 9756562 . T C 2471.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.52;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2500,228,0 chr1 9783128 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 9795471 . C T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 9823820 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 9823902 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 9831696 . C T 65.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:93,9,0 chr1 9862668 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 9864352 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 9864405 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 9881193 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 9910721 . A G 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 9932671 . G A 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-0.842;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr1 9936649 . C T 750.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.010;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=2.454;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=-1.119;SOR=0.368 GT:AD:DP:GQ:PL 0/1:26,30:56:99:779,0,646 chr1 9951013 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 9954328 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 9967482 . G A 415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.88;ReadPosRankSum=-1.496;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,12:19:99:444,0,235 chr1 9973446 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 9975951 . G A 266.90 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.140;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=29.66;ReadPosRankSum=-0.765;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,8:9:15:295,0,15 chr1 10008117 . G A 1112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.45;ReadPosRankSum=-1.073;SOR=0.746 GT:AD:DP:GQ:PL 0/1:36,41:77:99:1141,0,985 chr1 10022363 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 10046717 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 10095225 . A G 131.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:160,15,0 chr1 10130826 . A T 2453.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.06;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2482,237,0 chr1 10158243 . C G 310.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.870;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.95;ReadPosRankSum=-0.115;SOR=0.350 GT:AD:DP:GQ:PL 0/1:16,10:26:99:339,0,578 chr1 10175454 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.01;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 10175462 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.01;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 10187255 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 10219250 . T C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 10219290 . A G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 10258594 . C G 982.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.394;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=0.740;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.45;ReadPosRankSum=-0.819;SOR=0.776 GT:AD:DP:GQ:PL 0/1:63,41:104:99:1011,0,1572 chr1 10261996 . G A 1129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.749;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=0.784;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-1.573;SOR=0.665 GT:AD:DP:GQ:PL 0/1:48,43:91:99:1158,0,1187 chr1 10262095 . A G 796.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.202;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=6.592;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.72;ReadPosRankSum=0.076;SOR=1.513 GT:AD:DP:GQ:PL 0/1:36,32:68:99:825,0,957 chr1 10267349 . A T 1015.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.760;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=6.102;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.02;ReadPosRankSum=-0.435;SOR=0.223 GT:AD:DP:GQ:PL 0/1:40,38:78:99:1044,0,1242 chr1 10267809 . A G 286.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.12;ReadPosRankSum=-1.497;SOR=1.112 GT:AD:DP:GQ:PL 0/1:6,9:15:99:315,0,162 chr1 10268280 . C T 1099.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.179;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.41;ReadPosRankSum=0.604;SOR=0.830 GT:AD:DP:GQ:PL 0/1:23,44:67:99:1128,0,477 chr1 10272044 . C T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 10274866 . C T 149.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.429;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=5.727;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.49;ReadPosRankSum=0.000;SOR=2.409 GT:AD:DP:GQ:PL 0/1:14,6:20:99:178,0,422 chr1 10275257 . G A 835.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.82;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,24:24:72:864,72,0 chr1 10282294 . C T 355.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.138;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.702;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.48;ReadPosRankSum=2.025;SOR=0.387 GT:AD:DP:GQ:PL 0/1:18,13:31:99:384,0,579 chr1 10282571 . G A 1466.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.34;SOR=2.409 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1495,132,0 chr1 10295776 . C T 1868.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.439;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=0.638;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.21;ReadPosRankSum=1.606;SOR=0.811 GT:AD:DP:GQ:PL 0/1:84,69:153:99:1897,0,2455 chr1 10296504 . C A 578.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.833;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=2.755;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.67;ReadPosRankSum=0.960;SOR=0.166 GT:AD:DP:GQ:PL 0/1:9,19:28:99:607,0,291 chr1 10296790 . A G 1131.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.880;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.921;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.89;ReadPosRankSum=-0.465;SOR=0.839 GT:AD:DP:GQ:PL 0/1:29,38:67:99:1160,0,938 chr1 10297348 . A G 233.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.38;ReadPosRankSum=-0.728;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,7:10:95:262,0,95 chr1 10334478 . C G 2189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.832;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=1.277;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.51;ReadPosRankSum=2.541;SOR=0.572 GT:AD:DP:GQ:PL 0/1:93,82:175:99:2218,0,2677 chr1 10343424 . G A 522.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.91;ReadPosRankSum=-0.111;SOR=1.136 GT:AD:DP:GQ:PL 0/1:10,15:25:99:551,0,342 chr1 10360860 . G A 1748.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.897;ClippingRankSum=0.000;DP=143;ExcessHet=3.0103;FS=4.037;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.23;ReadPosRankSum=1.013;SOR=1.047 GT:AD:DP:GQ:PL 0/1:76,67:143:99:1777,0,1977 chr1 10360879 . C T 1977.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.226;ClippingRankSum=0.000;DP=155;ExcessHet=3.0103;FS=2.024;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=0.134;SOR=0.906 GT:AD:DP:GQ:PL 0/1:80,75:155:99:2006,0,2146 chr1 10365808 . C T 403.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.476;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=4.337;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.25;ReadPosRankSum=-0.586;SOR=2.694 GT:AD:DP:GQ:PL 0/1:7,12:19:99:432,0,223 chr1 10368394 . G A 953.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.683;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.618;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.34;ReadPosRankSum=1.112;SOR=1.085 GT:AD:DP:GQ:PL 0/1:22,30:52:99:982,0,648 chr1 10371100 . T C 898.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.047;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=0.794;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.27;ReadPosRankSum=0.790;SOR=0.568 GT:AD:DP:GQ:PL 0/1:57,40:97:99:927,0,1452 chr1 10375112 . T C 518.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=2.987;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.97;ReadPosRankSum=-0.907;SOR=1.292 GT:AD:DP:GQ:PL 0/1:24,16:40:99:547,0,879 chr1 10375266 . C A 1160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.381;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=0.662;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.00;ReadPosRankSum=0.165;SOR=0.596 GT:AD:DP:GQ:PL 0/1:72,57:129:99:1189,0,1857 chr1 10399722 . G A 2507.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.312;ClippingRankSum=0.000;DP=178;ExcessHet=3.0103;FS=0.587;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=-1.066;SOR=0.760 GT:AD:DP:GQ:PL 0/1:84,94:178:99:2536,0,2332 chr1 10400428 . T C 2022.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.627;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=2.001;MLEAC=1;MLEAF=0.500;MQ=59.87;MQRankSum=0.000;QD=17.29;ReadPosRankSum=-1.883;SOR=1.027 GT:AD:DP:GQ:PL 0/1:54,63:117:99:2051,0,1585 chr1 10411732 . A T 436.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.80;ReadPosRankSum=-0.671;SOR=0.693 GT:AD:DP:GQ:PL 0/1:13,13:26:99:465,0,465 chr1 10413139 . C T 1594.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.866;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=3.967;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.91;ReadPosRankSum=-1.024;SOR=1.016 GT:AD:DP:GQ:PL 0/1:99,62:161:99:1623,0,2652 chr1 10419578 . C G 6691.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.964;ClippingRankSum=0.000;DP=463;ExcessHet=3.0103;FS=0.518;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.45;ReadPosRankSum=0.123;SOR=0.647 GT:AD:DP:GQ:PL 0/1:211,252:463:99:6720,0,5330 chr1 10419621 . G A 6526.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.481;ClippingRankSum=0.000;DP=487;ExcessHet=3.0103;FS=0.525;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.40;ReadPosRankSum=-0.639;SOR=0.622 GT:AD:DP:GQ:PL 0/1:223,264:487:99:6555,0,6002 chr1 10430228 . T C 199.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.903;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.98;ReadPosRankSum=0.610;SOR=1.863 GT:AD:DP:GQ:PL 0/1:3,7:10:61:228,0,61 chr1 10430482 . G C 261.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.017;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.44;ReadPosRankSum=-0.961;SOR=0.465 GT:AD:DP:GQ:PL 0/1:21,10:31:99:290,0,647 chr1 10430493 . G C 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.310;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.12;ReadPosRankSum=-1.448;SOR=0.527 GT:AD:DP:GQ:PL 0/1:20,12:32:99:256,0,669 chr1 10430711 . C T 172.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.097;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.71;ReadPosRankSum=-0.914;SOR=0.399 GT:AD:DP:GQ:PL 0/1:4,7:11:99:201,0,147 chr1 10431152 . G A 196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.875;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.89;ReadPosRankSum=-0.852;SOR=0.399 GT:AD:DP:GQ:PL 0/1:4,7:11:99:225,0,134 chr1 10432883 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 10436886 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 10436887 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 10440279 . T A 976.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.237;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=1.278;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.78;ReadPosRankSum=-0.891;SOR=1.112 GT:AD:DP:GQ:PL 0/1:22,25:47:99:1005,0,1201 chr1 10440280 . T A 976.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.620;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.201;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.35;ReadPosRankSum=-1.171;SOR=0.941 GT:AD:DP:GQ:PL 0/1:22,26:48:99:1005,0,1201 chr1 10442653 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 10451487 . C T 1043.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.051;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=4.782;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.58;ReadPosRankSum=-0.391;SOR=1.015 GT:AD:DP:GQ:PL 0/1:28,39:67:99:1072,0,650 chr1 10451532 . T C 947.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.644;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=2.983;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.88;ReadPosRankSum=0.716;SOR=0.345 GT:AD:DP:GQ:PL 0/1:20,33:53:99:976,0,607 chr1 10469137 . T C 1333.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.465;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.67;ReadPosRankSum=2.426;SOR=0.814 GT:AD:DP:GQ:PL 0/1:34,46:80:99:1362,0,975 chr1 10495200 . C T 942.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.048;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=0.479;SOR=0.622 GT:AD:DP:GQ:PL 0/1:36,34:70:99:971,0,1043 chr1 10506038 . C A 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 10535983 . C T 241.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.493;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.18;ReadPosRankSum=1.501;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,8:10:53:270,0,53 chr1 10536284 . C T 1235.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.387;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.15;ReadPosRankSum=0.182;SOR=0.711 GT:AD:DP:GQ:PL 0/1:48,46:94:99:1264,0,1343 chr1 10536331 . A G 2290.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.19;SOR=2.070 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2319,201,0 chr1 10536473 . A G 273.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.22;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:302,24,0 chr1 10574114 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 10580381 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 10618598 . T C 1547.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.98;SOR=3.664 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1576,123,0 chr1 10622187 . C T 81.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:109,9,0 chr1 10654237 . G C 4305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.343;ClippingRankSum=0.000;DP=336;ExcessHet=3.0103;FS=7.319;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.81;ReadPosRankSum=-1.057;SOR=1.047 GT:AD:DP:GQ:PL 0/1:173,163:336:99:4334,0,4834 chr1 10654345 . C T 2371.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.371;ClippingRankSum=0.000;DP=199;ExcessHet=3.0103;FS=4.163;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.92;ReadPosRankSum=-1.203;SOR=0.611 GT:AD:DP:GQ:PL 0/1:122,77:199:99:2400,0,4102 chr1 10657398 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 10734838 . A G 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 10738432 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 10738495 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 10739520 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 10742195 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 10743393 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 10752360 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 10772804 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.524;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 10794416 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 10795581 . C G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 10819668 . G A 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.26;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:62,0,33 chr1 10823257 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 10830714 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 10834401 . C G 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr1 10834667 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 10837633 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 10845033 . A T 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr1 10850012 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 10904113 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 10935263 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 10946512 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 10958666 . A G 4556.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.159;ClippingRankSum=0.000;DP=353;ExcessHet=3.0103;FS=1.740;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=0.076;SOR=0.742 GT:AD:DP:GQ:PL 0/1:173,179:352:99:4585,0,4559 chr1 10964296 . A G 1318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.872;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.35;ReadPosRankSum=-0.481;SOR=0.737 GT:AD:DP:GQ:PL 0/1:30,46:76:99:1347,0,854 chr1 10964324 . A G 1021.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.077;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.988;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.75;ReadPosRankSum=0.016;SOR=0.549 GT:AD:DP:GQ:PL 0/1:27,34:61:99:1050,0,659 chr1 10964338 . T C 850.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.009;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=3.901;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.75;ReadPosRankSum=0.429;SOR=0.314 GT:AD:DP:GQ:PL 0/1:25,29:54:99:879,0,673 chr1 10975993 . T C 762.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.312;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=2.754;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.13;ReadPosRankSum=0.040;SOR=0.340 GT:AD:DP:GQ:PL 0/1:26,28:54:99:791,0,744 chr1 10990967 . T G 155.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.18;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:184,15,0 chr1 10991469 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 10991713 . C T 100.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.18;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:129,15,0 chr1 11002220 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 11003657 . G A 93.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr1 11012522 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11012828 . C T 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=-0.084;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,81 chr1 11019020 . A G 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=1.242;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,106 chr1 11027467 . G A 2973.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.202;ClippingRankSum=0.000;DP=273;ExcessHet=3.0103;FS=1.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.97;ReadPosRankSum=-0.522;SOR=0.801 GT:AD:DP:GQ:PL 0/1:136,135:271:99:3002,0,3456 chr1 11027778 . T C 459.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.736;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.54;ReadPosRankSum=-1.707;SOR=1.863 GT:AD:DP:GQ:PL 0/1:5,13:18:99:488,0,143 chr1 11030859 . C A 856.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.859;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.08;ReadPosRankSum=-1.164;SOR=0.756 GT:AD:DP:GQ:PL 0/1:50,35:85:99:885,0,1464 chr1 11034608 . G A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.69;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:107,0,30 chr1 11034982 . C T 347.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.747;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=11.020;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.49;ReadPosRankSum=0.948;SOR=0.039 GT:AD:DP:GQ:PL 0/1:10,14:24:99:376,0,311 chr1 11044619 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 11044655 . G A 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-0.084;SOR=0.039 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr1 11044788 . T C 254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.422;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=4.320;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=0.947;SOR=0.827 GT:AD:DP:GQ:PL 0/1:9,10:19:99:283,0,235 chr1 11045049 . C T 2777.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.481;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=0.667;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.87;ReadPosRankSum=0.591;SOR=0.794 GT:AD:DP:GQ:PL 0/1:55,72:127:99:2806,0,3155 chr1 11045065 . C T 2854.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.343;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.54;ReadPosRankSum=0.911;SOR=0.719 GT:AD:DP:GQ:PL 0/1:62,77:139:99:2883,0,3249 chr1 11046302 . T C 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.55;ReadPosRankSum=-2.041;SOR=0.473 GT:AD:DP:GQ:PL 0/1:8,6:14:99:176,0,292 chr1 11047382 . G T 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr1 11054883 . G T 721.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.644;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.956;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.46;ReadPosRankSum=-0.255;SOR=0.941 GT:AD:DP:GQ:PL 0/1:36,33:69:99:750,0,891 chr1 11055004 . G A 990.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.771;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.43;ReadPosRankSum=0.868;SOR=0.619 GT:AD:DP:GQ:PL 0/1:45,50:95:99:1019,0,1075 chr1 11059078 . G A 587.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.504;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.799;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.51;ReadPosRankSum=-0.297;SOR=0.362 GT:AD:DP:GQ:PL 0/1:6,19:25:99:616,0,175 chr1 11059120 . C T 407.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.825;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.99;ReadPosRankSum=-0.095;SOR=0.656 GT:AD:DP:GQ:PL 0/1:20,14:34:99:436,0,695 chr1 11059536 . G T 430.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.181;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=2.395;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.95;ReadPosRankSum=0.933;SOR=1.569 GT:AD:DP:GQ:PL 0/1:11,13:24:99:459,0,375 chr1 11059842 . T C 1377.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.04;SOR=1.775 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1406,129,0 chr1 11065809 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11066342 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11066375 . C G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 11066433 . A G 260.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.24;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:289,21,0 chr1 11066460 . C T 362.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:33:391,33,0 chr1 11066512 . C A 1201.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=2.517 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1230,99,0 chr1 11066884 . C T 1862.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=2.753 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1891,167,0 chr1 11067365 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 11067388 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 11067454 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 11067814 . A G 178.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.38;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:207,15,0 chr1 11067944 . A G 1380.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.01;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1409,111,0 chr1 11068272 . A G 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.41;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 11068597 . G A 3030.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.94;SOR=1.559 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3059,276,0 chr1 11069377 . T C 325.78 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.60;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:24:354,24,0 chr1 11069380 . T C 325.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.40;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:354,24,0 chr1 11069791 . A G 1728.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.10;SOR=2.880 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1757,147,0 chr1 11070586 . A G 334.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.99;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:363,27,0 chr1 11072160 . G A 1901.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.67;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1930,185,0 chr1 11072744 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11073986 . C T 683.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.396;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=3.371;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.68;ReadPosRankSum=-2.040;SOR=1.035 GT:AD:DP:GQ:PL 0/1:35,29:64:99:712,0,906 chr1 11074100 . T G 2346.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.25;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2375,192,0 chr1 11074139 . A T 1103.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.024;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.15;ReadPosRankSum=-0.883;SOR=0.620 GT:AD:DP:GQ:PL 0/1:36,42:78:99:1132,0,1085 chr1 11076209 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11077572 . T C 3290.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.720;ClippingRankSum=0.000;DP=227;ExcessHet=3.0103;FS=0.531;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.50;ReadPosRankSum=-2.250;SOR=0.626 GT:AD:DP:GQ:PL 0/1:113,114:227:99:3319,0,3172 chr1 11077721 . C T 482.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.966;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=9.613;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.78;ReadPosRankSum=-0.928;SOR=2.224 GT:AD:DP:GQ:PL 0/1:38,17:55:99:511,0,1066 chr1 11081130 . C G 8327.77 PASS AC=2;AF=1.00;AN=2;DP=257;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.40;SOR=1.261 GT:AD:DP:GQ:PL 1/1:0,257:257:99:8356,770,0 chr1 11091722 . A G 669.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.35;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:698,51,0 chr1 11095708 . C T 251.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.006;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=-1.711;SOR=0.512 GT:AD:DP:GQ:PL 0/1:10,8:18:99:280,0,351 chr1 11097822 . A G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.674;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 11098048 . C T 1746.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.565;ClippingRankSum=0.000;DP=154;ExcessHet=3.0103;FS=1.349;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.34;ReadPosRankSum=-1.426;SOR=0.575 GT:AD:DP:GQ:PL 0/1:89,65:154:99:1775,0,2524 chr1 11099514 . G A 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.000;SOR=2.494 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 11099932 . T C 898.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.013;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.98;ReadPosRankSum=-1.193;SOR=0.475 GT:AD:DP:GQ:PL 0/1:21,29:50:99:927,0,627 chr1 11103253 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11108472 . A G 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.489;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr1 11109619 . C T 1197.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.550;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=1.722;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.93;ReadPosRankSum=-0.438;SOR=0.527 GT:AD:DP:GQ:PL 0/1:42,44:86:99:1226,0,1037 chr1 11111169 . C T 981.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.238;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.64;ReadPosRankSum=0.111;SOR=0.773 GT:AD:DP:GQ:PL 0/1:35,37:72:99:1010,0,957 chr1 11114677 . T C 617.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.428;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.71;ReadPosRankSum=-2.111;SOR=0.708 GT:AD:DP:GQ:PL 0/1:21,21:42:99:646,0,668 chr1 11114794 . G A 823.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=2.070;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.29;ReadPosRankSum=1.289;SOR=0.587 GT:AD:DP:GQ:PL 0/1:29,33:62:99:852,0,738 chr1 11122204 . G A 1805.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.260;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=3.311;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.45;ReadPosRankSum=-2.778;SOR=1.133 GT:AD:DP:GQ:PL 0/1:65,60:125:99:1843,0,1743 chr1 11124432 . C T 1694.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.734;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=5.402;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.65;ReadPosRankSum=-0.029;SOR=1.451 GT:AD:DP:GQ:PL 0/1:44,52:96:99:1723,0,1211 chr1 11125342 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 11126840 . A G 1837.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.833;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=2.397;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.71;ReadPosRankSum=0.737;SOR=0.507 GT:AD:DP:GQ:PL 0/1:50,67:117:99:1866,0,1558 chr1 11127836 . T C 2919.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.64;SOR=2.084 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2948,246,0 chr1 11128825 . C A 438.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.321;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=1.342;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.55;ReadPosRankSum=0.566;SOR=0.399 GT:AD:DP:GQ:PL 0/1:20,18:38:99:467,0,547 chr1 11129020 . T C 977.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.015;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=5.510;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.50;ReadPosRankSum=-0.892;SOR=0.513 GT:AD:DP:GQ:PL 0/1:45,40:85:99:1006,0,1250 chr1 11129994 . A T 1586.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.443;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=3.770;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.44;ReadPosRankSum=1.361;SOR=1.281 GT:AD:DP:GQ:PL 0/1:39,52:91:99:1615,0,1024 chr1 11130124 . G A 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-1.368;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 11130673 . G A 3351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.217;ClippingRankSum=0.000;DP=262;ExcessHet=3.0103;FS=2.718;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=1.719;SOR=0.879 GT:AD:DP:GQ:PL 0/1:132,129:261:99:3380,0,3438 chr1 11134342 . G A 3103.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.953;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=3.853;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.33;ReadPosRankSum=1.074;SOR=0.385 GT:AD:DP:GQ:PL 0/1:60,79:139:99:3132,0,3921 chr1 11134343 . G C 3103.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.734;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=3.852;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.17;ReadPosRankSum=1.314;SOR=0.373 GT:AD:DP:GQ:PL 0/1:61,79:140:99:3132,0,3921 chr1 11134769 . G A 358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.003;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=0.366;SOR=0.551 GT:AD:DP:GQ:PL 0/1:13,11:24:99:387,0,437 chr1 11134817 . G A 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.85;ReadPosRankSum=-0.464;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,2:8:59:59,0,226 chr1 11139461 . T C 4861.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.259;ClippingRankSum=0.000;DP=356;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.66;ReadPosRankSum=1.204;SOR=0.682 GT:AD:DP:GQ:PL 0/1:191,165:356:99:4890,0,5876 chr1 11139484 . G A 6249.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.200;ClippingRankSum=0.000;DP=455;ExcessHet=3.0103;FS=1.202;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.74;ReadPosRankSum=-0.837;SOR=0.825 GT:AD:DP:GQ:PL 0/1:234,221:455:99:6278,0,6685 chr1 11139824 . G T 210.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.40;ReadPosRankSum=0.121;SOR=0.425 GT:AD:DP:GQ:PL 0/1:10,7:17:99:239,0,362 chr1 11145001 . C T 1478.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.956;ClippingRankSum=0.000;DP=145;ExcessHet=3.0103;FS=2.151;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.27;ReadPosRankSum=0.148;SOR=0.917 GT:AD:DP:GQ:PL 0/1:81,63:144:99:1507,0,2304 chr1 11150047 . C T 514.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.028;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.75;ReadPosRankSum=0.644;SOR=0.582 GT:AD:DP:GQ:PL 0/1:12,17:29:99:543,0,348 chr1 11156846 . T C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.524;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 11167281 . C T 312.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.295;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=3.388;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.03;ReadPosRankSum=-1.163;SOR=0.144 GT:AD:DP:GQ:PL 0/1:13,11:24:99:341,0,459 chr1 11167308 . C T 296.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.127;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=2.006;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.99;ReadPosRankSum=0.547;SOR=1.329 GT:AD:DP:GQ:PL 0/1:21,12:33:99:325,0,574 chr1 11189732 . G C 5110.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.373;ClippingRankSum=0.000;DP=388;ExcessHet=3.0103;FS=0.366;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.21;ReadPosRankSum=-0.311;SOR=0.663 GT:AD:DP:GQ:PL 0/1:193,194:387:99:5139,0,5062 chr1 11190102 . G C 206.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.191;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=-0.492;SOR=1.022 GT:AD:DP:GQ:PL 0/1:12,7:19:99:235,0,407 chr1 11212411 . C G 1935.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.384;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=0.613;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.33;ReadPosRankSum=0.239;SOR=0.800 GT:AD:DP:GQ:PL 0/1:84,73:157:99:1964,0,2282 chr1 11216284 . C T 1514.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.666;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=2.599;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.52;ReadPosRankSum=1.102;SOR=0.433 GT:AD:DP:GQ:PL 0/1:56,56:112:99:1543,0,1490 chr1 11216296 . C A 1402.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.361;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=12.869;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.17;ReadPosRankSum=-0.031;SOR=0.163 GT:AD:DP:GQ:PL 0/1:47,52:99:99:1431,0,1369 chr1 11218106 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11218232 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 11228561 . G A 1777.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.113;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=0.909;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.87;ReadPosRankSum=-0.181;SOR=0.856 GT:AD:DP:GQ:PL 0/1:55,57:112:99:1806,0,1763 chr1 11228576 . G C 2042.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.410;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.91;ReadPosRankSum=0.524;SOR=0.676 GT:AD:DP:GQ:PL 0/1:69,68:137:99:2071,0,2138 chr1 11228701 . G A 13756.77 PASS AC=2;AF=1.00;AN=2;DP=415;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.15;SOR=1.261 GT:AD:DP:GQ:PL 1/1:0,415:415:99:13785,1244,0 chr1 11229104 . G A 418.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.26;ReadPosRankSum=0.196;SOR=1.493 GT:AD:DP:GQ:PL 0/1:6,12:18:99:447,0,196 chr1 11232609 . T A 173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=1.781;SOR=0.340 GT:AD:DP:GQ:PL 0/1:10,6:16:99:202,0,368 chr1 11232696 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 11233090 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11233143 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 11233160 . G T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 11234417 . T A 1227.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.96;SOR=4.680 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1256,96,0 chr1 11237705 . T C 3907.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.98;SOR=1.736 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3936,345,0 chr1 11238733 . T C 762.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.58;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,19:19:57:791,57,0 chr1 11240281 . A G 2128.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.926;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=2.119;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=0.715;SOR=0.512 GT:AD:DP:GQ:PL 0/1:77,81:158:99:2157,0,2226 chr1 11241657 . A G 3330.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.001;ClippingRankSum=0.000;DP=292;ExcessHet=3.0103;FS=7.114;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.45;ReadPosRankSum=-1.723;SOR=1.062 GT:AD:DP:GQ:PL 0/1:157,134:291:99:3359,0,4105 chr1 11243030 . C T 319.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.90;ReadPosRankSum=0.802;SOR=0.481 GT:AD:DP:GQ:PL 0/1:13,10:23:99:348,0,473 chr1 11253671 . G A 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=-0.792;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,112 chr1 11254279 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 11257263 . C T 1708.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.525;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=0.898;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.86;ReadPosRankSum=0.850;SOR=0.830 GT:AD:DP:GQ:PL 0/1:57,58:115:99:1737,0,1642 chr1 11257875 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11258179 . C T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 11258706 . C G 305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.599;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=4.472;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.84;ReadPosRankSum=-0.714;SOR=2.833 GT:AD:DP:GQ:PL 0/1:5,9:14:99:334,0,133 chr1 11258750 . G C 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.842;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 11259530 . A G 847.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.923;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=2.610;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.30;ReadPosRankSum=1.588;SOR=1.209 GT:AD:DP:GQ:PL 0/1:22,30:52:99:876,0,558 chr1 11285972 . C G 3032.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.211;ClippingRankSum=0.000;DP=209;ExcessHet=3.0103;FS=0.505;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.51;ReadPosRankSum=-1.853;SOR=0.638 GT:AD:DP:GQ:PL 0/1:104,105:209:99:3061,0,2716 chr1 11302340 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 11348001 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11348087 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 11364038 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11392929 . G A 54.52 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 11396548 . T C 54.10 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=13.52;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:11:82,11,0 chr1 11421901 . A G 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 11434455 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 11437173 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11439331 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 11440190 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11440240 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11449442 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 11453995 . T C 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 11476750 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 11489444 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.11;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 11502219 . C T 601.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.00;SOR=2.712 GT:AD:DP:GQ:PL 1/1:0,17:17:51:630,51,0 chr1 11513068 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 11514309 . C G 4809.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.85;SOR=2.372 GT:AD:DP:GQ:PL 1/1:0,138:138:99:4838,415,0 chr1 11515203 . G T 1100.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.23;SOR=5.353 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1129,87,0 chr1 11515274 . A G 2595.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.17;SOR=2.995 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2624,219,0 chr1 11519413 . G A 3117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.769;ClippingRankSum=0.000;DP=246;ExcessHet=3.0103;FS=3.076;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.67;ReadPosRankSum=0.449;SOR=0.506 GT:AD:DP:GQ:PL 0/1:124,122:246:99:3146,0,3460 chr1 11524571 . C T 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 11533583 . A G 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=3.590;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=1.127;SOR=0.116 GT:AD:DP:GQ:PL 0/1:9,7:16:99:244,0,327 chr1 11534343 . T C 1393.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.118;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=1.602;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.52;ReadPosRankSum=1.629;SOR=0.860 GT:AD:DP:GQ:PL 0/1:69,52:121:99:1422,0,1878 chr1 11534944 . C A 3239.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.817;ClippingRankSum=0.000;DP=261;ExcessHet=3.0103;FS=0.953;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.41;ReadPosRankSum=0.666;SOR=0.627 GT:AD:DP:GQ:PL 0/1:126,135:261:99:3268,0,3344 chr1 11535238 . C G 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=-0.431;SOR=0.941 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr1 11536398 . C T 1172.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.988;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=9.650;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.47;ReadPosRankSum=-0.966;SOR=1.611 GT:AD:DP:GQ:PL 0/1:66,46:112:99:1201,0,1670 chr1 11536705 . C T 479.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.175;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=5.909;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.88;ReadPosRankSum=-1.702;SOR=1.532 GT:AD:DP:GQ:PL 0/1:34,20:54:99:508,0,1004 chr1 11539099 . C A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 11559120 . G C 32.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.92;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:61,0,33 chr1 11568258 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.65;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 11568268 . G C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.70;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 11568275 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.39;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 11635046 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11647532 . G C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 11648995 . C G 1945.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.910 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1974,175,0 chr1 11649707 . G T 746.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.469;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.21;ReadPosRankSum=0.578;SOR=0.693 GT:AD:DP:GQ:PL 0/1:16,25:41:99:775,0,435 chr1 11654311 . T G 223.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.754;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=1.708;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=-0.097;SOR=1.371 GT:AD:DP:GQ:PL 0/1:21,9:30:99:252,0,583 chr1 11658138 . A G 1578.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.744;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=3.921;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.33;ReadPosRankSum=0.848;SOR=2.303 GT:AD:DP:GQ:PL 0/1:30,44:74:99:1607,0,996 chr1 11664881 . A C 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 11664891 . G C 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 11668837 . G A 4426.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.539;ClippingRankSum=0.000;DP=349;ExcessHet=3.0103;FS=2.281;MLEAC=1;MLEAF=0.500;MQ=59.49;MQRankSum=-0.012;QD=12.72;ReadPosRankSum=-1.198;SOR=0.641 GT:AD:DP:GQ:PL 0/1:183,165:348:99:4455,0,5158 chr1 11671120 . G C 615.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.017;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=2.634;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.99;ReadPosRankSum=0.712;SOR=0.184 GT:AD:DP:GQ:PL 0/1:7,21:28:99:644,0,208 chr1 11673992 . C G 1225.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.243;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.92;ReadPosRankSum=-3.067;SOR=0.941 GT:AD:DP:GQ:PL 0/1:39,38:77:99:1254,0,1286 chr1 11675205 . C T 2108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.519;ClippingRankSum=0.000;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.60;ReadPosRankSum=0.802;SOR=0.714 GT:AD:DP:GQ:PL 0/1:80,75:155:99:2137,0,1996 chr1 11675320 . G C 1051.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.89;SOR=3.690 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1080,81,0 chr1 11675595 . G A 3685.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.200;ClippingRankSum=0.000;DP=268;ExcessHet=3.0103;FS=5.336;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.75;ReadPosRankSum=0.158;SOR=0.442 GT:AD:DP:GQ:PL 0/1:135,133:268:99:3714,0,3752 chr1 11675784 . C A 4983.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.470;ClippingRankSum=0.000;DP=385;ExcessHet=3.0103;FS=2.695;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.94;ReadPosRankSum=-0.472;SOR=0.837 GT:AD:DP:GQ:PL 0/1:192,193:385:99:5012,0,5367 chr1 11675820 . A G 4921.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.743;ClippingRankSum=0.000;DP=338;ExcessHet=3.0103;FS=10.035;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.60;ReadPosRankSum=-0.901;SOR=0.390 GT:AD:DP:GQ:PL 0/1:162,175:337:99:4950,0,4589 chr1 11676353 . C T 133.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:161,12,0 chr1 11676994 . G C 3135.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=1.354 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3164,284,0 chr1 11680301 . A G 5285.77 PASS AC=2;AF=1.00;AN=2;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.10;SOR=1.818 GT:AD:DP:GQ:PL 1/1:0,155:155:99:5314,465,0 chr1 11680755 . A C 346.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.77;ReadPosRankSum=0.627;SOR=1.765 GT:AD:DP:GQ:PL 0/1:4,10:14:99:375,0,125 chr1 11691567 . C A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 11706367 . C T 1017.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.573;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=2.015;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.33;ReadPosRankSum=-0.231;SOR=0.420 GT:AD:DP:GQ:PL 0/1:33,38:71:99:1046,0,985 chr1 11706832 . A G 550.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.716;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.74;ReadPosRankSum=0.178;SOR=0.515 GT:AD:DP:GQ:PL 0/1:15,20:35:99:579,0,488 chr1 11712172 . A G 1646.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.664;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.11;ReadPosRankSum=0.820;SOR=0.730 GT:AD:DP:GQ:PL 0/1:55,54:109:99:1675,0,1764 chr1 11712246 . A G 2153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.240;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.17;ReadPosRankSum=0.011;SOR=0.667 GT:AD:DP:GQ:PL 0/1:67,75:142:99:2182,0,1923 chr1 11719442 . T C 1489.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.22;SOR=2.726 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1518,123,0 chr1 11722724 . G C 3507.77 PASS AC=2;AF=1.00;AN=2;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.04;SOR=0.903 GT:AD:DP:GQ:PL 1/1:0,113:113:99:3536,339,0 chr1 11722829 . C T 1149.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.74;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1178,125,0 chr1 11724929 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11732598 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11739991 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 11741030 . G A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 11747369 . C T 3380.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.82;SOR=1.352 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3409,309,0 chr1 11749678 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11749788 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 11764076 . A C 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr1 11764185 . A C 1744.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.43;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1773,138,0 chr1 11764246 . T C 3052.77 PASS AC=2;AF=1.00;AN=2;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.50;SOR=2.223 GT:AD:DP:GQ:PL 1/1:0,87:87:99:3081,261,0 chr1 11764289 . G A 4217.77 PASS AC=2;AF=1.00;AN=2;DP=134;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.95;SOR=1.294 GT:AD:DP:GQ:PL 1/1:0,132:132:99:4246,395,0 chr1 11764499 . A G 3449.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.11;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,82:82:99:3478,250,0 chr1 11764518 . T C 3011.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.29;SOR=2.483 GT:AD:DP:GQ:PL 1/1:0,67:67:99:3040,205,0 chr1 11764521 . C T 2896.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.84;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2925,196,0 chr1 11764564 . T C 1545.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.58;SOR=7.328 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1574,114,0 chr1 11765794 . G C 1968.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.85;SOR=2.753 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1997,168,0 chr1 11766573 . C T 7631.77 PASS AC=2;AF=1.00;AN=2;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.85;SOR=1.698 GT:AD:DP:GQ:PL 1/1:0,219:219:99:7660,658,0 chr1 11767123 . A G 2813.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.40;SOR=2.245 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2842,240,0 chr1 11767247 . A G 3941.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.85;SOR=1.532 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3970,360,0 chr1 11767298 . A G 2129.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.43;SOR=1.512 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2158,209,0 chr1 11768181 . G A 3521.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.57;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3550,300,0 chr1 11768262 . G A 3743.77 PASS AC=2;AF=1.00;AN=2;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.13;SOR=0.946 GT:AD:DP:GQ:PL 1/1:0,113:113:99:3772,339,0 chr1 11768537 . G A 352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.210;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.05;ReadPosRankSum=-0.760;SOR=0.430 GT:AD:DP:GQ:PL 0/1:4,12:16:99:381,0,114 chr1 11771558 . C T 7051.77 PASS AC=2;AF=1.00;AN=2;DP=218;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.35;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,218:218:99:7080,654,0 chr1 11771699 . A G 2430.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.50;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2459,189,0 chr1 11772043 . T A 4975.77 PASS AC=2;AF=1.00;AN=2;DP=158;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.49;SOR=1.290 GT:AD:DP:GQ:PL 1/1:0,158:158:99:5004,473,0 chr1 11772254 . G C 3919.77 PASS AC=2;AF=1.00;AN=2;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.26;SOR=3.300 GT:AD:DP:GQ:PL 1/1:0,108:108:99:3948,324,0 chr1 11776261 . G A 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.76;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 11776384 . T C 2574.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.10;SOR=1.569 GT:AD:DP:GQ:PL 1/1:0,57:57:99:2603,175,0 chr1 11776385 . G A 2574.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.60;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2603,175,0 chr1 11776571 . T C 2424.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.57;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2453,204,0 chr1 11776625 . C T 1959.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.66;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1988,179,0 chr1 11776811 . A G 706.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.89;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,20:20:60:735,60,0 chr1 11777242 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 11778791 . G T 4361.77 PASS AC=2;AF=1.00;AN=2;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.90;QD=32.55;SOR=1.072 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4390,394,0 chr1 11779909 . G A 673.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.63;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,22:22:66:702,66,0 chr1 11779941 . T C 461.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.78;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,15:15:45:490,45,0 chr1 11782087 . C G 2815.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.34;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2844,246,0 chr1 11784273 . C T 5218.77 PASS AC=2;AF=1.00;AN=2;DP=166;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.44;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,166:166:99:5247,497,0 chr1 11784770 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.12;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 11785056 . G A 1028.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.19;SOR=2.694 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1057,93,0 chr1 11785112 . T G 1825.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.20;SOR=2.024 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1854,165,0 chr1 11785461 . G C 299.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.42;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:328,24,0 chr1 11787702 . C T 1914.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.81;SOR=1.159 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1943,165,0 chr1 11788822 . A G 2723.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.86;SOR=2.395 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2752,231,0 chr1 11789390 . A G 5139.77 PASS AC=2;AF=1.00;AN=2;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.38;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,154:154:99:5168,462,0 chr1 11791061 . A G 3413.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.46;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,83:83:99:3442,250,0 chr1 11794400 . G A 4295.77 PASS AC=2;AF=1.00;AN=2;DP=134;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.06;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4324,402,0 chr1 11794698 . G A 7617.77 PASS AC=2;AF=1.00;AN=2;DP=236;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.28;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,236:236:99:7646,706,0 chr1 11800063 . T C 806.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.11;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:835,60,0 chr1 11800626 . T C 404.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.73;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,12:12:36:433,36,0 chr1 11806987 . T C 1881.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.85;SOR=2.876 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1910,162,0 chr1 11811651 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 11816360 . C T 748.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.86;SOR=3.160 GT:AD:DP:GQ:PL 1/1:0,21:21:63:777,63,0 chr1 11824498 . A G 7876.77 PASS AC=2;AF=1.00;AN=2;DP=239;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.10;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,238:238:99:7905,715,0 chr1 11839978 . G A 2909.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.69;SOR=3.373 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2938,240,0 chr1 11890334 . T C 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr1 11890521 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11901073 . G C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.72;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 11901078 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.94;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 11910946 . C G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.52;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 11911288 . T C 889.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.79;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,25:25:75:918,75,0 chr1 11915109 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 11922316 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.02;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 11922487 . T C 4657.77 PASS AC=2;AF=1.00;AN=2;DP=146;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.90;SOR=1.831 GT:AD:DP:GQ:PL 1/1:0,146:146:99:4686,437,0 chr1 11923149 . A G 16710.77 PASS AC=2;AF=1.00;AN=2;DP=519;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.20;QD=32.20;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,519:519:99:16739,1556,0 chr1 11926478 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 11944942 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 11949898 . C T 2901.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.644;ClippingRankSum=0.000;DP=250;ExcessHet=3.0103;FS=0.463;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.61;ReadPosRankSum=0.415;SOR=0.644 GT:AD:DP:GQ:PL 0/1:129,121:250:99:2930,0,3314 chr1 11952923 . G A 177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.78;ReadPosRankSum=-0.210;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,6:10:99:206,0,136 chr1 11955097 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.126;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.95;ReadPosRankSum=-1.036;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:57:78,0,57 chr1 11958321 . C G 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.349;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.06;ReadPosRankSum=-0.424;SOR=0.754 GT:AD:DP:GQ:PL 0/1:5,7:12:99:221,0,136 chr1 11964178 . C T 2150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.733;ClippingRankSum=0.000;DP=214;ExcessHet=3.0103;FS=0.505;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=0.079;SOR=0.624 GT:AD:DP:GQ:PL 0/1:118,95:213:99:2179,0,2809 chr1 11965296 . T C 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.98;ReadPosRankSum=0.550;SOR=1.112 GT:AD:DP:GQ:PL 0/1:6,9:15:99:298,0,206 chr1 11966033 . A G 633.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.280;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.11;ReadPosRankSum=-0.621;SOR=0.538 GT:AD:DP:GQ:PL 0/1:15,20:35:99:662,0,476 chr1 11967147 . C T 913.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.057;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.32;ReadPosRankSum=0.795;SOR=0.627 GT:AD:DP:GQ:PL 0/1:25,31:56:99:942,0,667 chr1 11967251 . G A 236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.31;ReadPosRankSum=1.480;SOR=0.368 GT:AD:DP:GQ:PL 0/1:2,7:9:56:265,0,56 chr1 11970938 . A G 183.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.42;ReadPosRankSum=-1.242;SOR=1.170 GT:AD:DP:GQ:PL 0/1:3,6:9:86:212,0,86 chr1 11973056 . A G 2095.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.096;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=0.814;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.46;ReadPosRankSum=-0.047;SOR=0.537 GT:AD:DP:GQ:PL 0/1:64,56:120:99:2124,0,4051 chr1 11973063 . G C 1971.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.376;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=0.847;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.61;ReadPosRankSum=-0.183;SOR=0.527 GT:AD:DP:GQ:PL 0/1:60,52:112:99:2000,0,3971 chr1 11992348 . G A 723.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.64;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:752,54,0 chr1 11996383 . C T 623.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.228;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=5.350;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.90;ReadPosRankSum=1.464;SOR=2.192 GT:AD:DP:GQ:PL 0/1:42,21:63:99:652,0,1462 chr1 12002148 . A G 4061.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.206;ClippingRankSum=0.000;DP=296;ExcessHet=3.0103;FS=2.079;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.72;ReadPosRankSum=1.748;SOR=0.560 GT:AD:DP:GQ:PL 0/1:143,153:296:99:4090,0,3920 chr1 12002304 . C G 415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.539;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.34;ReadPosRankSum=2.357;SOR=1.402 GT:AD:DP:GQ:PL 0/1:16,13:29:99:444,0,546 chr1 12002450 . T G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.11;ReadPosRankSum=0.000;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,4:7:70:78,0,70 chr1 12006987 . T G 1448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.416;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.00;ReadPosRankSum=0.197;SOR=0.862 GT:AD:DP:GQ:PL 0/1:21,42:63:99:1477,0,654 chr1 12007448 . G T 465.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.682;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.88;ReadPosRankSum=-0.633;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,14:18:99:494,0,113 chr1 12011623 . A G 1204.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.361;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.145;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.08;ReadPosRankSum=-0.853;SOR=0.523 GT:AD:DP:GQ:PL 0/1:18,42:60:99:1233,0,404 chr1 12022869 . A G 1163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.429;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=-1.023;SOR=0.743 GT:AD:DP:GQ:PL 0/1:50,46:96:99:1192,0,1289 chr1 12031153 . T C 584.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.186;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.62;ReadPosRankSum=0.801;SOR=0.409 GT:AD:DP:GQ:PL 0/1:20,20:40:99:613,0,611 chr1 12052663 . C T 31.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.611;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.97;ReadPosRankSum=0.619;SOR=2.303 GT:AD:DP:GQ:PL 0/1:6,2:8:60:60,0,127 chr1 12082060 . T C 61.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:89,9,0 chr1 12084162 . A G 1151.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.88;SOR=2.049 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1180,102,0 chr1 12084605 . T A 8061.77 PASS AC=2;AF=1.00;AN=2;DP=182;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.11;SOR=1.166 GT:AD:DP:GQ:PL 1/1:0,182:182:99:8090,551,0 chr1 12084610 . C T 8080.77 PASS AC=2;AF=1.00;AN=2;DP=182;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.22;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,182:182:99:8109,554,0 chr1 12104380 . C T 6260.77 PASS AC=2;AF=1.00;AN=2;DP=189;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.13;SOR=1.560 GT:AD:DP:GQ:PL 1/1:0,189:189:99:6289,568,0 chr1 12109343 . C T 1090.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=3.806;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=8.966;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=27.40;ReadPosRankSum=-0.987;SOR=5.353 GT:AD:DP:GQ:PL 1/1:2,29:31:44:1119,44,0 chr1 12111621 . A G 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 12115761 . A G 8680.77 PASS AC=2;AF=1.00;AN=2;DP=264;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.88;SOR=1.470 GT:AD:DP:GQ:PL 1/1:0,264:264:99:8709,792,0 chr1 12120067 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 12123117 . A C 1718.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.42;SOR=2.786 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1747,141,0 chr1 12138578 . T C 1557.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.099;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=3.046;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.05;ReadPosRankSum=-0.469;SOR=0.518 GT:AD:DP:GQ:PL 0/1:80,61:141:99:1586,0,2173 chr1 12153460 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 12153461 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 12204298 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 12207208 . A G 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-0.272;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr1 12218875 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 12259937 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 12279562 . A T 864.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.059;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=1.866;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.09;ReadPosRankSum=1.716;SOR=0.644 GT:AD:DP:GQ:PL 0/1:40,38:78:99:893,0,1029 chr1 12282542 . T G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 12314005 . A T 221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.84;ReadPosRankSum=-0.886;SOR=0.693 GT:AD:DP:GQ:PL 0/1:7,7:14:99:250,0,250 chr1 12335566 . T C 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=1.383;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,217 chr1 12341811 . A C 2981.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.258;ClippingRankSum=0.000;DP=198;ExcessHet=3.0103;FS=1.866;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.14;ReadPosRankSum=-0.616;SOR=0.854 GT:AD:DP:GQ:PL 0/1:92,105:197:99:3010,0,2689 chr1 12363383 . G C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.25;ReadPosRankSum=0.842;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:72:72,0,140 chr1 12368983 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 12478671 . G A 3080.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.257;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=0.495;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.22;ReadPosRankSum=-0.285;SOR=0.645 GT:AD:DP:GQ:PL 0/1:117,116:233:99:3109,0,3107 chr1 12507106 . C T 2652.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.370;ClippingRankSum=0.000;DP=167;ExcessHet=3.0103;FS=1.252;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.98;ReadPosRankSum=1.034;SOR=0.573 GT:AD:DP:GQ:PL 0/1:76,90:166:99:2681,0,2227 chr1 12523231 . T C 104.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:132,9,0 chr1 12523253 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 12568608 . A G 519.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.246;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.99;ReadPosRankSum=-1.111;SOR=1.022 GT:AD:DP:GQ:PL 0/1:11,15:26:99:548,0,349 chr1 12578936 . C T 6088.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.442;ClippingRankSum=0.000;DP=406;ExcessHet=3.0103;FS=0.520;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.03;ReadPosRankSum=1.696;SOR=0.748 GT:AD:DP:GQ:PL 0/1:194,211:405:99:6117,0,5336 chr1 12578990 . T C 4964.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.084;ClippingRankSum=0.000;DP=312;ExcessHet=3.0103;FS=0.429;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.91;ReadPosRankSum=-0.505;SOR=0.748 GT:AD:DP:GQ:PL 0/1:145,167:312:99:4993,0,4134 chr1 12579140 . G A 3807.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.697;ClippingRankSum=0.000;DP=249;ExcessHet=3.0103;FS=2.789;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.29;ReadPosRankSum=0.334;SOR=0.799 GT:AD:DP:GQ:PL 0/1:110,139:249:99:3836,0,2990 chr1 12579361 . T C 3475.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.304;ClippingRankSum=0.000;DP=335;ExcessHet=3.0103;FS=1.813;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.38;ReadPosRankSum=-0.304;SOR=0.796 GT:AD:DP:GQ:PL 0/1:185,150:335:99:3504,0,4583 chr1 12607397 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 12616201 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 12621096 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 12622849 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 12622903 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 12623011 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 12623096 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 12623117 . C A 52.88 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.63;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:16:81,0,16 chr1 12627807 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 12627856 . A G 100.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:128,9,0 chr1 12658804 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 12824757 . T C 209.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.198;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.39;MQRankSum=-3.623;QD=14.98;ReadPosRankSum=-0.697;SOR=1.828 GT:AD:DP:GQ:PL 0/1:7,7:14:99:238,0,216 chr1 12827195 . C G 505.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.074;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.11;MQRankSum=-3.419;QD=9.73;ReadPosRankSum=1.443;SOR=0.866 GT:AD:DP:GQ:PL 0/1:30,22:52:99:534,0,824 chr1 12827690 . C T 4516.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.405;ClippingRankSum=0.000;DP=328;ExcessHet=3.0103;FS=0.835;MLEAC=1;MLEAF=0.500;MQ=54.05;MQRankSum=-1.804;QD=13.77;ReadPosRankSum=1.614;SOR=0.764 GT:AD:DP:GQ:PL 0/1:158,170:328:99:4545,0,4210 chr1 12827720 . T G 10294.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.254;ClippingRankSum=0.000;DP=325;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.09;MQRankSum=2.024;QD=31.68;ReadPosRankSum=-1.359;SOR=0.790 GT:AD:DP:GQ:PL 1/1:2,323:325:99:10323,925,0 chr1 12828529 . C A 225.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.057;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=16.621;MLEAC=1;MLEAF=0.500;MQ=40.12;MQRankSum=-1.286;QD=4.34;ReadPosRankSum=-1.604;SOR=3.891 GT:AD:DP:GQ:PL 0/1:42,10:52:99:254,0,1220 chr1 12828981 . G C 251.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.227;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.53;MQRankSum=-0.138;QD=17.98;ReadPosRankSum=1.227;SOR=1.022 GT:AD:DP:GQ:PL 0/1:6,8:14:99:280,0,174 chr1 12829022 . G T 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.97;MQRankSum=0.187;QD=20.98;ReadPosRankSum=-1.876;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:259,0,134 chr1 12829144 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 12838192 . A G 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.741;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.98;ReadPosRankSum=-0.605;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,6:11:99:149,0,142 chr1 12838525 . G C 292.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.667;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=3.408;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.81;ReadPosRankSum=1.713;SOR=1.473 GT:AD:DP:GQ:PL 0/1:31,12:43:99:321,0,978 chr1 12838849 . C T 1310.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.645;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=8.989;MLEAC=1;MLEAF=0.500;MQ=56.13;MQRankSum=-2.313;QD=8.68;ReadPosRankSum=-0.163;SOR=1.370 GT:AD:DP:GQ:PL 0/1:95,56:151:99:1339,0,2548 chr1 12838910 . C T 338.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.510;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=17.443;MLEAC=1;MLEAF=0.500;MQ=52.03;MQRankSum=-6.402;QD=3.99;ReadPosRankSum=-2.292;SOR=3.951 GT:AD:DP:GQ:PL 0/1:69,16:85:99:367,0,2057 chr1 12847924 . T C 5589.77 PASS AC=2;AF=1.00;AN=2;DP=172;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.65;QD=32.50;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,172:172:99:5618,516,0 chr1 12848032 . C T 446.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=7.287;MLEAC=1;MLEAF=0.500;MQ=49.08;MQRankSum=-2.452;QD=3.15;ReadPosRankSum=1.580;SOR=1.318 GT:AD:DP:GQ:PL 0/1:117,25:142:99:475,0,3466 chr1 12880195 . C A 77.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.421;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=5.643;MLEAC=1;MLEAF=0.500;MQ=49.32;MQRankSum=-2.241;QD=3.53;ReadPosRankSum=0.714;SOR=0.031 GT:AD:DP:GQ:PL 0/1:16,6:22:99:106,0,570 chr1 12893339 . G A 1825.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.453;ClippingRankSum=0.000;DP=289;ExcessHet=3.0103;FS=1.003;MLEAC=1;MLEAF=0.500;MQ=56.69;MQRankSum=2.583;QD=6.32;ReadPosRankSum=-0.584;SOR=0.616 GT:AD:DP:GQ:PL 0/1:208,81:289:99:1854,0,6008 chr1 12893425 . T C 414.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.321;ClippingRankSum=0.000;DP=193;ExcessHet=3.0103;FS=32.900;MLEAC=1;MLEAF=0.500;MQ=50.20;MQRankSum=-6.728;QD=2.15;ReadPosRankSum=-0.801;SOR=3.996 GT:AD:DP:GQ:PL 0/1:166,27:193:99:443,0,4555 chr1 12893437 . C G 1060.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.539;ClippingRankSum=0.000;DP=167;ExcessHet=3.0103;FS=0.713;MLEAC=1;MLEAF=0.500;MQ=49.72;MQRankSum=-0.620;QD=6.35;ReadPosRankSum=0.220;SOR=0.763 GT:AD:DP:GQ:PL 0/1:120,47:167:99:1089,0,3447 chr1 12893472 . T C 818.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.520;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=1.155;MLEAC=1;MLEAF=0.500;MQ=46.12;MQRankSum=-3.422;QD=7.65;ReadPosRankSum=0.967;SOR=0.473 GT:AD:DP:GQ:PL 0/1:75,32:107:99:847,0,2444 chr1 12893629 . T C 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=45.56;MQRankSum=-1.981;QD=4.82;ReadPosRankSum=0.366;SOR=2.258 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,142 chr1 12895136 . T G 1134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.336;ClippingRankSum=0.000;DP=167;ExcessHet=3.0103;FS=9.442;MLEAC=1;MLEAF=0.500;MQ=52.54;MQRankSum=-11.039;QD=6.80;ReadPosRankSum=-1.246;SOR=1.437 GT:AD:DP:GQ:PL 0/1:113,54:167:99:1163,0,3357 chr1 12926613 . C T 561.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.562;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.33;MQRankSum=0.256;QD=10.60;ReadPosRankSum=2.285;SOR=0.622 GT:AD:DP:GQ:PL 0/1:25,28:53:99:590,0,523 chr1 12937302 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.01;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 13104656 . C G 1241.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.040;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.53;MQRankSum=-1.239;QD=12.42;ReadPosRankSum=0.740;SOR=0.627 GT:AD:DP:GQ:PL 0/1:51,49:100:99:1270,0,1340 chr1 13104762 . C A 1799.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.183;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=0.653;MLEAC=1;MLEAF=0.500;MQ=51.99;MQRankSum=-0.083;QD=14.28;ReadPosRankSum=-1.936;SOR=0.630 GT:AD:DP:GQ:PL 0/1:61,65:126:99:1828,0,1632 chr1 13105548 . G A 570.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.393;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.70;MQRankSum=0.176;QD=13.92;ReadPosRankSum=0.532;SOR=0.542 GT:AD:DP:GQ:PL 0/1:18,23:41:99:599,0,424 chr1 13116000 . G A 1774.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.831;ClippingRankSum=0.000;DP=266;ExcessHet=3.0103;FS=6.053;MLEAC=1;MLEAF=0.500;MQ=52.51;MQRankSum=-4.586;QD=6.70;ReadPosRankSum=-0.672;SOR=0.693 GT:AD:DP:GQ:PL 0/1:173,92:265:99:1803,0,4773 chr1 13116101 . G T 773.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.225;ClippingRankSum=0.000;DP=189;ExcessHet=3.0103;FS=46.044;MLEAC=1;MLEAF=0.500;MQ=57.11;MQRankSum=-12.512;QD=4.12;ReadPosRankSum=0.139;SOR=3.676 GT:AD:DP:GQ:PL 0/1:151,37:188:99:802,0,4523 chr1 13174955 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 13178951 . G A 4831.77 PASS AC=2;AF=1.00;AN=2;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=45.13;QD=31.38;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,154:154:99:4860,462,0 chr1 13179319 . T C 59.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.21;QD=19.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:87,9,0 chr1 13224727 . A G 1475.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.477;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=1.012;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.94;ReadPosRankSum=0.719;SOR=0.914 GT:AD:DP:GQ:PL 0/1:36,38:74:99:1504,0,1862 chr1 13224737 . G C 1589.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.434;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=1.958;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.39;ReadPosRankSum=-0.468;SOR=0.967 GT:AD:DP:GQ:PL 0/1:39,43:82:99:1618,0,1875 chr1 13224919 . T A 3744.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.830;ClippingRankSum=0.000;DP=289;ExcessHet=3.0103;FS=2.596;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.96;ReadPosRankSum=-0.284;SOR=0.550 GT:AD:DP:GQ:PL 0/1:139,150:289:99:3773,0,3743 chr1 13225001 . A G 11343.77 PASS AC=2;AF=1.00;AN=2;DP=359;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.98;QD=31.69;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,358:358:99:11372,1072,0 chr1 13225068 . A G 5191.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.157;ClippingRankSum=0.000;DP=350;ExcessHet=3.0103;FS=3.421;MLEAC=1;MLEAF=0.500;MQ=59.95;MQRankSum=0.077;QD=14.88;ReadPosRankSum=-0.449;SOR=0.866 GT:AD:DP:GQ:PL 0/1:166,183:349:99:5220,0,4679 chr1 13225208 . C G 6030.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.703;ClippingRankSum=0.000;DP=383;ExcessHet=3.0103;FS=1.674;MLEAC=1;MLEAF=0.500;MQ=59.26;MQRankSum=-0.612;QD=15.75;ReadPosRankSum=-1.144;SOR=0.654 GT:AD:DP:GQ:PL 0/1:166,217:383:99:6059,0,4547 chr1 13225325 . T C 3100.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.003;ClippingRankSum=0.000;DP=192;ExcessHet=3.0103;FS=2.260;MLEAC=1;MLEAF=0.500;MQ=48.52;MQRankSum=-0.385;QD=16.15;ReadPosRankSum=-0.943;SOR=0.510 GT:AD:DP:GQ:PL 0/1:85,107:192:99:3129,0,2585 chr1 13225359 . A G 4620.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.70;QD=29.18;SOR=5.013 GT:AD:DP:GQ:PL 1/1:0,117:117:99:4649,352,0 chr1 13226025 . G A 1861.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.259;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.80;MQRankSum=-4.272;QD=15.01;ReadPosRankSum=-0.415;SOR=0.686 GT:AD:DP:GQ:PL 0/1:73,51:124:99:1890,0,2921 chr1 13226028 . C T 1861.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.907;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.74;MQRankSum=-4.313;QD=15.26;ReadPosRankSum=-0.425;SOR=0.700 GT:AD:DP:GQ:PL 0/1:72,50:122:99:1890,0,2921 chr1 13226052 . T C 1266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.903;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.96;MQRankSum=-5.232;QD=11.11;ReadPosRankSum=0.367;SOR=0.709 GT:AD:DP:GQ:PL 0/1:66,48:114:99:1295,0,2025 chr1 13226098 . G T 1260.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.755;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=1.050;MLEAC=1;MLEAF=0.500;MQ=53.94;MQRankSum=-6.597;QD=15.96;ReadPosRankSum=1.090;SOR=0.505 GT:AD:DP:GQ:PL 0/1:45,34:79:99:1289,0,1854 chr1 13226100 . A G 1260.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.443;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=2.334;MLEAC=1;MLEAF=0.500;MQ=53.86;MQRankSum=-6.530;QD=16.16;ReadPosRankSum=0.902;SOR=0.427 GT:AD:DP:GQ:PL 0/1:44,34:78:99:1289,0,1854 chr1 13226110 . G C 1236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.118;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=1.102;MLEAC=1;MLEAF=0.500;MQ=53.06;MQRankSum=-6.185;QD=17.92;ReadPosRankSum=0.060;SOR=0.470 GT:AD:DP:GQ:PL 0/1:38,31:69:99:1265,0,1606 chr1 13226209 . G A 223.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.887;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.831;MLEAC=1;MLEAF=0.500;MQ=54.81;MQRankSum=-3.763;QD=11.19;ReadPosRankSum=0.238;SOR=1.609 GT:AD:DP:GQ:PL 0/1:13,7:20:99:252,0,501 chr1 13226222 . T A 190.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.625;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.84;MQRankSum=-3.825;QD=11.22;ReadPosRankSum=-0.352;SOR=0.963 GT:AD:DP:GQ:PL 0/1:11,6:17:99:219,0,444 chr1 13226260 . G C 173.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.16;QD=28.97;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:202,18,0 chr1 13231461 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 13237656 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 13245418 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 13245868 . C T 803.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.355;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=4.386;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.00;ReadPosRankSum=0.330;SOR=1.473 GT:AD:DP:GQ:PL 0/1:39,28:67:99:832,0,1207 chr1 13246759 . T C 3107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.597;ClippingRankSum=0.000;DP=229;ExcessHet=3.0103;FS=0.482;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.57;ReadPosRankSum=0.241;SOR=0.738 GT:AD:DP:GQ:PL 0/1:112,117:229:99:3136,0,3186 chr1 13247199 . A G 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.221;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.07;MQRankSum=0.732;QD=15.08;ReadPosRankSum=0.000;SOR=1.911 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,145 chr1 13260128 . G C 848.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.360;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=1.053;MLEAC=1;MLEAF=0.500;MQ=42.70;MQRankSum=2.724;QD=8.49;ReadPosRankSum=-1.023;SOR=0.484 GT:AD:DP:GQ:PL 0/1:63,37:100:99:877,0,1932 chr1 13260152 . C A 2163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.247;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=10.339;MLEAC=1;MLEAF=0.500;MQ=41.94;MQRankSum=-2.570;QD=18.82;ReadPosRankSum=0.105;SOR=1.780 GT:AD:DP:GQ:PL 0/1:44,71:115:99:2192,0,1016 chr1 13318367 . C T 356.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.562;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.62;MQRankSum=-5.057;QD=10.19;ReadPosRankSum=-0.019;SOR=0.883 GT:AD:DP:GQ:PL 0/1:20,15:35:99:385,0,548 chr1 13318452 . A G 350.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.592;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=5.114;MLEAC=1;MLEAF=0.500;MQ=47.05;MQRankSum=-5.862;QD=3.90;ReadPosRankSum=0.151;SOR=1.329 GT:AD:DP:GQ:PL 0/1:68,22:90:99:379,0,2027 chr1 13321611 . A T 395.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.491;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=2.395;MLEAC=1;MLEAF=0.500;MQ=49.81;MQRankSum=-1.568;QD=16.49;ReadPosRankSum=-1.520;SOR=1.569 GT:AD:DP:GQ:PL 0/1:11,13:24:99:424,0,319 chr1 13369246 . T C 2774.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.229;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=18.498;MLEAC=1;MLEAF=0.500;MQ=54.46;MQRankSum=-10.297;QD=11.91;ReadPosRankSum=1.513;SOR=1.661 GT:AD:DP:GQ:PL 0/1:155,78:233:99:2803,0,10059 chr1 13369247 . G A 2774.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.104;ClippingRankSum=0.000;DP=235;ExcessHet=3.0103;FS=18.520;MLEAC=1;MLEAF=0.500;MQ=54.51;MQRankSum=-10.359;QD=11.81;ReadPosRankSum=1.909;SOR=1.668 GT:AD:DP:GQ:PL 0/1:157,78:235:99:2803,0,10059 chr1 13369358 . G A 2315.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.172;ClippingRankSum=0.000;DP=351;ExcessHet=3.0103;FS=13.978;MLEAC=1;MLEAF=0.500;MQ=53.05;MQRankSum=-18.030;QD=6.62;ReadPosRankSum=0.607;SOR=0.923 GT:AD:DP:GQ:PL 0/1:237,113:350:99:2344,0,6934 chr1 13369384 . G A 2107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.725;ClippingRankSum=0.000;DP=350;ExcessHet=3.0103;FS=24.765;MLEAC=1;MLEAF=0.500;MQ=53.03;MQRankSum=-17.188;QD=6.02;ReadPosRankSum=2.482;SOR=1.465 GT:AD:DP:GQ:PL 0/1:246,104:350:99:2136,0,7182 chr1 13369423 . C G 1603.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.677;ClippingRankSum=0.000;DP=312;ExcessHet=3.0103;FS=28.770;MLEAC=1;MLEAF=0.500;MQ=53.37;MQRankSum=-16.050;QD=5.14;ReadPosRankSum=-0.547;SOR=1.886 GT:AD:DP:GQ:PL 0/1:225,87:312:99:1632,0,6892 chr1 13371119 . T C 562.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.425;ClippingRankSum=0.000;DP=264;ExcessHet=3.0103;FS=46.092;MLEAC=1;MLEAF=0.500;MQ=48.10;MQRankSum=-7.762;QD=2.14;ReadPosRankSum=-0.383;SOR=2.831 GT:AD:DP:GQ:PL 0/1:210,53:263:99:591,0,5923 chr1 13371759 . A G 271.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.507;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=7.116;MLEAC=1;MLEAF=0.500;MQ=52.81;MQRankSum=-5.155;QD=4.94;ReadPosRankSum=-0.189;SOR=1.905 GT:AD:DP:GQ:PL 0/1:43,12:55:99:300,0,1175 chr1 13384965 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 13390071 . A G 119.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.241;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.52;MQRankSum=-1.593;QD=13.31;ReadPosRankSum=-1.559;SOR=0.368 GT:AD:DP:GQ:PL 0/1:4,5:9:99:148,0,106 chr1 13392079 . T C 2680.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.059;ClippingRankSum=0.000;DP=181;ExcessHet=3.0103;FS=0.549;MLEAC=1;MLEAF=0.500;MQ=56.46;MQRankSum=-7.585;QD=14.81;ReadPosRankSum=-0.067;SOR=0.611 GT:AD:DP:GQ:PL 0/1:84,97:181:99:2709,0,2195 chr1 13392592 . T G 63.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.80;ReadPosRankSum=1.501;SOR=0.180 GT:AD:DP:GQ:PL 0/1:8,3:11:92:92,0,289 chr1 13416079 . T C 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=0.571;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:256,0,173 chr1 13418237 . C G 5311.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.510;ClippingRankSum=0.000;DP=347;ExcessHet=3.0103;FS=3.573;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.40;ReadPosRankSum=0.436;SOR=0.531 GT:AD:DP:GQ:PL 0/1:142,203:345:99:5340,0,3635 chr1 13420757 . C G 2841.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.195;ClippingRankSum=0.000;DP=250;ExcessHet=3.0103;FS=2.879;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.37;ReadPosRankSum=0.555;SOR=0.537 GT:AD:DP:GQ:PL 0/1:137,113:250:99:2870,0,3835 chr1 13438798 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 13438816 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 13438916 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 13475948 . C T 4309.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.110;ClippingRankSum=0.000;DP=317;ExcessHet=3.0103;FS=0.411;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.60;ReadPosRankSum=-1.875;SOR=0.650 GT:AD:DP:GQ:PL 0/1:157,160:317:99:4338,0,4265 chr1 13483615 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 13488517 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 13504122 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 13545947 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 13545964 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 13545969 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 13554959 . G T 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-0.084;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr1 13574722 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 13583922 . C T 3454.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.209;ClippingRankSum=0.000;DP=241;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.34;ReadPosRankSum=-0.427;SOR=0.677 GT:AD:DP:GQ:PL 0/1:112,129:241:99:3483,0,3081 chr1 13607360 . A G 7611.77 PASS AC=2;AF=1.00;AN=2;DP=216;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.15;SOR=2.462 GT:AD:DP:GQ:PL 1/1:0,216:216:99:7640,648,0 chr1 13610327 . G T 2604.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.83;SOR=2.272 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2633,231,0 chr1 13610594 . G T 3726.77 PASS AC=2;AF=1.00;AN=2;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.19;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,109:109:99:3755,327,0 chr1 13610786 . T C 563.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.92;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,16:16:48:592,48,0 chr1 13611404 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 13613519 . C T 221.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.61;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:250,18,0 chr1 13614369 . C G 4542.77 PASS AC=2;AF=1.00;AN=2;DP=152;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.08;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,151:151:99:4571,453,0 chr1 13615578 . A G 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 13616236 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 13628493 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 13715814 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.842;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 13730763 . G A 278.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.411;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.91;ReadPosRankSum=1.400;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,10:14:90:307,0,90 chr1 13732900 . T C 792.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.054;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=2.197;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.49;ReadPosRankSum=0.177;SOR=0.418 GT:AD:DP:GQ:PL 0/1:37,32:69:99:821,0,976 chr1 13769962 . T A 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.74;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 13770140 . A T 1284.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.433;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=0.685;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.12;ReadPosRankSum=-2.239;SOR=0.804 GT:AD:DP:GQ:PL 0/1:73,54:127:99:1313,0,1959 chr1 13770326 . T C 1037.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.341;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.30;ReadPosRankSum=-0.546;SOR=0.693 GT:AD:DP:GQ:PL 0/1:26,34:60:99:1066,0,757 chr1 13773268 . C T 4626.77 PASS AC=2;AF=1.00;AN=2;DP=139;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.29;SOR=1.939 GT:AD:DP:GQ:PL 1/1:0,139:139:99:4655,417,0 chr1 13773403 . A G 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.58;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr1 13778129 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 13778644 . T A 4006.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=0.850;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.83;ReadPosRankSum=0.160;SOR=0.716 GT:AD:DP:GQ:PL 1/1:7,132:139:99:4035,120,0 chr1 13778803 . G A 3727.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.05;SOR=1.279 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3756,315,0 chr1 13782619 . A G 3015.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.27;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,88:88:99:3044,263,0 chr1 13810695 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 13811998 . G A 210.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.13;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:239,18,0 chr1 13816508 . A G 7298.77 PASS AC=2;AF=1.00;AN=2;DP=238;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.67;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,238:238:99:7327,713,0 chr1 13823010 . C A 573.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.75;SOR=2.712 GT:AD:DP:GQ:PL 1/1:0,17:17:51:602,51,0 chr1 13823106 . C T 1875.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.91;SOR=1.823 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1904,171,0 chr1 13823127 . T C 2303.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.31;SOR=1.194 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2332,228,0 chr1 13823349 . T A 865.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.11;SOR=4.003 GT:AD:DP:GQ:PL 1/1:0,23:23:69:894,69,0 chr1 13823621 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 13825722 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 13893691 . A G 4185.77 PASS AC=2;AF=1.00;AN=2;DP=127;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.96;SOR=1.397 GT:AD:DP:GQ:PL 1/1:0,127:127:99:4214,381,0 chr1 13894447 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 13943685 . C A 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 13948338 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 13952698 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 13952702 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 14126681 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.23;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 14126690 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.31;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 14129040 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 14141087 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 14141098 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 14417476 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 14478378 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 14593164 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 14598535 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 14598609 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 14625347 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 14712275 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 14712295 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 14777522 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 14787303 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 14787308 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 14787311 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 14789379 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 14798724 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 14885357 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 14888198 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 14909452 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 14924821 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 14930105 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 14930112 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 14930930 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 14930979 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 14945460 . C T 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 14959545 . G A 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr1 15021144 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 15021158 . G C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 15037054 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 15060132 . T C 4280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.118;ClippingRankSum=0.000;DP=297;ExcessHet=3.0103;FS=2.532;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.41;ReadPosRankSum=1.358;SOR=0.862 GT:AD:DP:GQ:PL 0/1:143,154:297:99:4309,0,3943 chr1 15063365 . A G 208.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=1.691;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:237,0,328 chr1 15063366 . A C 208.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.876;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=1.691;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:237,0,328 chr1 15063649 . A G 2275.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.102;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=0.713;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.62;ReadPosRankSum=-0.798;SOR=0.591 GT:AD:DP:GQ:PL 0/1:51,65:116:99:2304,0,3247 chr1 15063682 . C T 1721.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.330;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.26;ReadPosRankSum=-0.618;SOR=0.690 GT:AD:DP:GQ:PL 0/1:37,44:81:99:1750,0,3032 chr1 15063715 . G A 1079.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.641;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=3.290;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.63;ReadPosRankSum=0.397;SOR=1.530 GT:AD:DP:GQ:PL 0/1:28,27:55:99:1108,0,2432 chr1 15081115 . A T 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.253;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr1 15095159 . A G 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.484;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 15095289 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 15101438 . C T 609.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.88;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,18:18:54:638,54,0 chr1 15101486 . G A 1972.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.67;SOR=3.528 GT:AD:DP:GQ:PL 1/1:0,52:52:99:2001,156,0 chr1 15101862 . T C 2925.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.18;SOR=3.698 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2954,235,0 chr1 15102012 . C T 343.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.38;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:372,30,0 chr1 15103156 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.86;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 15103200 . G C 301.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.97;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:330,24,0 chr1 15103732 . G C 267.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.47;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:296,24,0 chr1 15104437 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 15112494 . G A 6857.77 PASS AC=2;AF=1.00;AN=2;DP=206;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.29;SOR=1.241 GT:AD:DP:GQ:PL 1/1:0,206:206:99:6886,618,0 chr1 15114335 . T C 225.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.123;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.29;ReadPosRankSum=-1.218;SOR=1.179 GT:AD:DP:GQ:PL 0/1:12,8:20:99:254,0,441 chr1 15114533 . T C 2084.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.032;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=3.880;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.18;ReadPosRankSum=-0.102;SOR=0.826 GT:AD:DP:GQ:PL 0/1:63,84:147:99:2113,0,1563 chr1 15114779 . C T 425.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.83;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:454,36,0 chr1 15117792 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 15118147 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 15118272 . C A 86.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:114,9,0 chr1 15118276 . C G 86.28 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.04;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:9:114,9,0 chr1 15140225 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 15146686 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 15148420 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 15163891 . T C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 15164369 . T A 2426.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.93;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2455,228,0 chr1 15167043 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 15171231 . T C 11164.77 PASS AC=2;AF=1.00;AN=2;DP=346;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.36;SOR=1.126 GT:AD:DP:GQ:PL 1/1:0,345:345:99:11193,1034,0 chr1 15171348 . T A 8759.77 PASS AC=2;AF=1.00;AN=2;DP=254;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.49;SOR=1.986 GT:AD:DP:GQ:PL 1/1:0,254:254:99:8788,762,0 chr1 15171458 . A G 2053.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.15;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,54:54:99:2082,162,0 chr1 15171956 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 15179579 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 15182449 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 15184315 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.96;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 15184317 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.57;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 15184441 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 15184561 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 15186859 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 15186995 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 15187588 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 15191161 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 15191165 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 15192607 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 15192921 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 15213669 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 15214902 . C T 118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.20;ReadPosRankSum=0.210;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:99:147,0,240 chr1 15214903 . A G 118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.88;ReadPosRankSum=-0.431;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:147,0,240 chr1 15214911 . C T 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.908;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=0.230;SOR=0.399 GT:AD:DP:GQ:PL 0/1:4,7:11:99:259,0,147 chr1 15214916 . G A 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.473;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=-0.718;SOR=1.112 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,282 chr1 15215041 . C T 3254.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.00;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,93:93:99:3283,279,0 chr1 15215111 . T C 2957.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.064;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=3.570;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.99;ReadPosRankSum=0.371;SOR=0.975 GT:AD:DP:GQ:PL 0/1:82,103:185:99:2986,0,2124 chr1 15215577 . G A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-0.385;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 15226336 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 15239541 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 15239607 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 15242925 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 15242975 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 15251699 . T C 1061.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.417;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=2.993;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.41;ReadPosRankSum=0.962;SOR=0.313 GT:AD:DP:GQ:PL 0/1:24,37:61:99:1090,0,707 chr1 15272529 . G A 966.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-4.240;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=7.032;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.01;ReadPosRankSum=-0.238;SOR=0.088 GT:AD:DP:GQ:PL 0/1:34,35:69:99:995,0,1212 chr1 15272573 . G A 690.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.363;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.85;ReadPosRankSum=-1.092;SOR=0.743 GT:AD:DP:GQ:PL 0/1:20,21:41:99:719,0,709 chr1 15272664 . G T 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.27;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr1 15272668 . G C 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.83;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr1 15316722 . G A 210.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.64;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:239,18,0 chr1 15344987 . G A 1304.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.96;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1333,108,0 chr1 15358499 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-0.189;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 15374856 . T G 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.839;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.41;ReadPosRankSum=-0.564;SOR=0.446 GT:AD:DP:GQ:PL 0/1:8,6:14:99:174,0,277 chr1 15374860 . G T 168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.903;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.88;ReadPosRankSum=0.411;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,6:10:99:197,0,144 chr1 15375801 . T G 359.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.622;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=1.441;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.58;ReadPosRankSum=-1.143;SOR=0.430 GT:AD:DP:GQ:PL 0/1:19,15:34:99:388,0,554 chr1 15381279 . A G 2551.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.568;ClippingRankSum=0.000;DP=189;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.50;ReadPosRankSum=1.449;SOR=0.651 GT:AD:DP:GQ:PL 0/1:93,96:189:99:2580,0,2572 chr1 15381724 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 15382044 . A G 3707.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.312;ClippingRankSum=0.000;DP=241;ExcessHet=3.0103;FS=1.612;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.45;ReadPosRankSum=1.008;SOR=0.574 GT:AD:DP:GQ:PL 0/1:108,132:240:99:3736,0,2960 chr1 15382811 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=1.036;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 15382881 . G A 243.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.077;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=4.075;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.60;ReadPosRankSum=-1.370;SOR=0.086 GT:AD:DP:GQ:PL 0/1:14,9:23:99:272,0,504 chr1 15383016 . G A 1201.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.967;ClippingRankSum=0.000;DP=176;ExcessHet=3.0103;FS=0.653;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.28;ReadPosRankSum=2.363;SOR=0.801 GT:AD:DP:GQ:PL 0/1:108,57:165:99:1230,0,4527 chr1 15383020 . A G 1574.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.158;ClippingRankSum=0.000;DP=188;ExcessHet=3.0103;FS=0.644;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=2.745;SOR=0.775 GT:AD:DP:GQ:PL 0/1:116,57:173:99:1612,0,4678 chr1 15383145 . T C 2832.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.506;ClippingRankSum=0.000;DP=268;ExcessHet=3.0103;FS=2.085;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.151;SOR=0.571 GT:AD:DP:GQ:PL 0/1:149,116:265:99:2861,0,3672 chr1 15383336 . C T 334.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.274;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.74;ReadPosRankSum=-0.400;SOR=0.914 GT:AD:DP:GQ:PL 0/1:9,11:20:99:363,0,282 chr1 15383479 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.967;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 15383730 . C T 1616.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.972;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=3.183;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.07;ReadPosRankSum=0.698;SOR=1.012 GT:AD:DP:GQ:PL 0/1:70,64:134:99:1645,0,1942 chr1 15383915 . G C 1373.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.642;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=0.739;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.60;ReadPosRankSum=-0.243;SOR=0.788 GT:AD:DP:GQ:PL 0/1:57,52:109:99:1402,0,1502 chr1 15388346 . G C 574.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.187;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=8.860;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.95;ReadPosRankSum=1.422;SOR=0.045 GT:AD:DP:GQ:PL 0/1:6,18:24:99:603,0,178 chr1 15388657 . C T 435.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.241;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=0.730;SOR=1.721 GT:AD:DP:GQ:PL 0/1:14,14:28:99:464,0,458 chr1 15391342 . A G 429.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.759;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.92;ReadPosRankSum=1.774;SOR=0.770 GT:AD:DP:GQ:PL 0/1:13,14:27:99:458,0,379 chr1 15397347 . G A 2281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.230;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=0.604;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.17;ReadPosRankSum=-0.178;SOR=0.628 GT:AD:DP:GQ:PL 0/1:74,87:161:99:2310,0,1876 chr1 15397537 . A G 1198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.329;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=2.195;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.32;ReadPosRankSum=0.189;SOR=0.431 GT:AD:DP:GQ:PL 0/1:46,44:90:99:1227,0,1400 chr1 15442237 . A G 167.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.58;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:196,15,0 chr1 15445562 . G T 1958.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.493;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=3.987;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=-0.854;SOR=1.154 GT:AD:DP:GQ:PL 0/1:73,66:139:99:1987,0,2131 chr1 15446438 . A G 828.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.020;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.25;ReadPosRankSum=0.367;SOR=0.655 GT:AD:DP:GQ:PL 0/1:26,25:51:99:857,0,895 chr1 15456586 . T C 1194.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.401;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.75;ReadPosRankSum=-0.057;SOR=0.627 GT:AD:DP:GQ:PL 0/1:38,43:81:99:1223,0,930 chr1 15456886 . C T 554.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.961;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=0.429;SOR=0.507 GT:AD:DP:GQ:PL 0/1:20,17:37:99:583,0,677 chr1 15457276 . A G 286.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.34;ReadPosRankSum=1.244;SOR=0.527 GT:AD:DP:GQ:PL 0/1:11,9:20:99:315,0,399 chr1 15461774 . A C 2712.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.212;ClippingRankSum=0.000;DP=232;ExcessHet=3.0103;FS=2.924;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.69;ReadPosRankSum=-0.462;SOR=0.662 GT:AD:DP:GQ:PL 0/1:126,106:232:99:2741,0,3049 chr1 15461996 . C T 661.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.799;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.32;ReadPosRankSum=0.399;SOR=0.598 GT:AD:DP:GQ:PL 0/1:45,26:71:99:690,0,1189 chr1 15462135 . G A 486.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.855;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=3.108;MLEAC=1;MLEAF=0.500;MQ=59.59;MQRankSum=0.000;QD=11.06;ReadPosRankSum=0.409;SOR=1.270 GT:AD:DP:GQ:PL 0/1:26,18:44:99:515,0,749 chr1 15462198 . C T 278.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.22;MQRankSum=0.000;QD=12.12;ReadPosRankSum=-0.630;SOR=0.368 GT:AD:DP:GQ:PL 0/1:14,9:23:99:307,0,512 chr1 15462508 . T C 180.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.426;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.91;ReadPosRankSum=0.874;SOR=1.402 GT:AD:DP:GQ:PL 0/1:8,6:14:99:209,0,217 chr1 15462585 . T G 1051.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.086;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.53;ReadPosRankSum=1.628;SOR=0.762 GT:AD:DP:GQ:PL 0/1:29,31:60:99:1080,0,978 chr1 15462681 . C T 2784.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.766;ClippingRankSum=0.000;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.01;ReadPosRankSum=0.404;SOR=0.700 GT:AD:DP:GQ:PL 0/1:117,97:214:99:2813,0,3430 chr1 15462802 . A C 5929.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.369;ClippingRankSum=0.000;DP=470;ExcessHet=3.0103;FS=1.740;MLEAC=1;MLEAF=0.500;MQ=59.97;MQRankSum=0.000;QD=12.67;ReadPosRankSum=0.373;SOR=0.603 GT:AD:DP:GQ:PL 0/1:238,230:468:99:5958,0,6142 chr1 15462951 . C G 2288.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.068;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=2.767;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.23;ReadPosRankSum=0.616;SOR=1.158 GT:AD:DP:GQ:PL 0/1:59,60:119:99:2317,0,4050 chr1 15462955 . T A 2243.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.977;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.68;ReadPosRankSum=-0.122;SOR=0.769 GT:AD:DP:GQ:PL 0/1:55,59:114:99:2272,0,4022 chr1 15463045 . G A 252.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.11;ReadPosRankSum=-1.019;SOR=0.752 GT:AD:DP:GQ:PL 0/1:17,8:25:99:281,0,1252 chr1 15463050 . G C 255.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.474;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.12;ReadPosRankSum=-0.759;SOR=0.693 GT:AD:DP:GQ:PL 0/1:16,7:23:99:284,0,1215 chr1 15471821 . C T 130.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.68;ReadPosRankSum=0.566;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:159,0,208 chr1 15471822 . A G 130.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.68;ReadPosRankSum=0.566;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:159,0,208 chr1 15481703 . C T 347.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.978;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=0.808;SOR=0.724 GT:AD:DP:GQ:PL 0/1:17,11:28:99:376,0,520 chr1 15482207 . C T 1906.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.545;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=13.842;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.02;ReadPosRankSum=0.916;SOR=2.063 GT:AD:DP:GQ:PL 0/1:75,61:136:99:1935,0,2212 chr1 15482272 . G A 4145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.930;ClippingRankSum=0.000;DP=298;ExcessHet=3.0103;FS=2.591;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.91;ReadPosRankSum=-0.116;SOR=0.549 GT:AD:DP:GQ:PL 0/1:138,160:298:99:4174,0,3743 chr1 15482377 . G A 4875.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.297;ClippingRankSum=0.000;DP=360;ExcessHet=3.0103;FS=10.607;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.54;ReadPosRankSum=-0.621;SOR=1.131 GT:AD:DP:GQ:PL 0/1:176,184:360:99:4904,0,4438 chr1 15482541 . G A 619.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.085;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.66;MQRankSum=-0.919;QD=16.75;ReadPosRankSum=1.005;SOR=0.749 GT:AD:DP:GQ:PL 0/1:18,19:37:99:648,0,601 chr1 15483381 . G A 1064.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.836;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.92;MQRankSum=0.876;QD=15.21;ReadPosRankSum=0.978;SOR=0.659 GT:AD:DP:GQ:PL 0/1:29,41:70:99:1093,0,763 chr1 15485937 . A G 4916.77 PASS AC=2;AF=1.00;AN=2;DP=148;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.22;SOR=2.088 GT:AD:DP:GQ:PL 1/1:0,148:148:99:4945,443,0 chr1 15487256 . C T 3118.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.15;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3147,291,0 chr1 15567026 . A C 1006.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.012;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=1.349;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.49;ReadPosRankSum=-1.281;SOR=0.976 GT:AD:DP:GQ:PL 0/1:32,33:65:99:1035,0,935 chr1 15567793 . C T 1558.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.222;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=6.154;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.91;ReadPosRankSum=-0.258;SOR=1.425 GT:AD:DP:GQ:PL 0/1:46,52:98:99:1587,0,1354 chr1 15673991 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 15678362 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 15720057 . T G 565.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.159;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=3.038;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.25;ReadPosRankSum=-1.006;SOR=0.152 GT:AD:DP:GQ:PL 0/1:13,18:31:99:594,0,435 chr1 15725089 . C T 916.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.95;SOR=2.387 GT:AD:DP:GQ:PL 1/1:0,27:27:81:945,81,0 chr1 15730127 . G T 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.566;SOR=1.022 GT:AD:DP:GQ:PL 0/1:3,4:7:70:146,0,70 chr1 15731107 . G T 2742.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.425;ClippingRankSum=0.000;DP=211;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.00;ReadPosRankSum=0.073;SOR=0.733 GT:AD:DP:GQ:PL 0/1:109,102:211:99:2771,0,2998 chr1 15768557 . C T 3584.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.664;ClippingRankSum=0.000;DP=279;ExcessHet=3.0103;FS=4.129;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=0.858;SOR=0.930 GT:AD:DP:GQ:PL 0/1:145,134:279:99:3613,0,3705 chr1 15768821 . C T 1132.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.07;SOR=5.353 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1161,87,0 chr1 15770398 . C T 789.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.935;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=1.530;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.49;ReadPosRankSum=0.854;SOR=1.051 GT:AD:DP:GQ:PL 0/1:25,26:51:99:818,0,722 chr1 15770439 . C T 3148.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.99;SOR=2.758 GT:AD:DP:GQ:PL 1/1:0,90:90:99:3177,270,0 chr1 15770742 . G A 2294.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.11;SOR=3.370 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2323,183,0 chr1 15783174 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 15784320 . G A 599.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.199;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.95;ReadPosRankSum=0.869;SOR=1.051 GT:AD:DP:GQ:PL 0/1:23,20:43:99:628,0,820 chr1 15799142 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 15822806 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 15835691 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 15889457 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 15916125 . C A 825.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.233;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.57;ReadPosRankSum=1.162;SOR=0.836 GT:AD:DP:GQ:PL 0/1:18,29:47:99:854,0,530 chr1 15918867 . G A 71.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.521;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.42;ReadPosRankSum=0.166;SOR=0.412 GT:AD:DP:GQ:PL 0/1:16,5:21:99:100,0,502 chr1 15929149 . C T 1593.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.779;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.28;ReadPosRankSum=-1.397;SOR=0.658 GT:AD:DP:GQ:PL 0/1:67,53:120:99:1622,0,2085 chr1 15929512 . T C 2711.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.07;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2740,246,0 chr1 15933318 . A G 5434.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-1.449;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=2.405;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.94;ReadPosRankSum=0.511;SOR=0.850 GT:AD:DP:GQ:PL 1/1:3,162:165:99:5463,370,0 chr1 15934421 . C T 5408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.396;ClippingRankSum=0.000;DP=425;ExcessHet=3.0103;FS=0.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=-0.671;SOR=0.629 GT:AD:DP:GQ:PL 0/1:219,205:424:99:5437,0,6209 chr1 15935909 . C T 2026.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.833;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=0.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.69;ReadPosRankSum=-0.981;SOR=0.576 GT:AD:DP:GQ:PL 0/1:68,70:138:99:2055,0,2057 chr1 15936957 . A G 707.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.93;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,19:19:57:736,57,0 chr1 15937769 . G A 4214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.649;ClippingRankSum=0.000;DP=244;ExcessHet=3.0103;FS=6.062;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.27;ReadPosRankSum=1.268;SOR=0.929 GT:AD:DP:GQ:PL 0/1:107,137:244:99:4243,0,3043 chr1 15938927 . A G 3328.77 PASS AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.01;SOR=1.925 GT:AD:DP:GQ:PL 1/1:0,104:104:99:3357,312,0 chr1 15940876 . C G 95.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:123,9,0 chr1 15944685 . T C 1918.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.627;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=1.393;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.65;ReadPosRankSum=-0.054;SOR=0.840 GT:AD:DP:GQ:PL 0/1:64,67:131:99:1947,0,1643 chr1 15944765 . G A 2130.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.011;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=1.806;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.58;ReadPosRankSum=-0.813;SOR=0.840 GT:AD:DP:GQ:PL 0/1:97,87:184:99:2159,0,2494 chr1 15945755 . A G 2075.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.80;SOR=1.823 GT:AD:DP:GQ:PL 1/1:0,57:57:99:2104,171,0 chr1 15945914 . C T 3330.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.211;ClippingRankSum=0.000;DP=259;ExcessHet=3.0103;FS=4.448;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.86;ReadPosRankSum=0.403;SOR=0.992 GT:AD:DP:GQ:PL 0/1:137,122:259:99:3359,0,3784 chr1 15948274 . C T 4272.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.986;ClippingRankSum=0.000;DP=283;ExcessHet=3.0103;FS=4.022;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.10;ReadPosRankSum=-0.570;SOR=0.949 GT:AD:DP:GQ:PL 0/1:133,150:283:99:4301,0,3577 chr1 15948752 . C T 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:32:74,0,32 chr1 15958847 . G A 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 15960027 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 15990021 . T C 503.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.49;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:48:532,48,0 chr1 15990136 . T C 257.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.03;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:286,21,0 chr1 15991211 . A G 864.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.82;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,29:29:87:893,87,0 chr1 15992737 . A G 1134.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.52;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1163,108,0 chr1 15993367 . G C 294.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.054;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.53;ReadPosRankSum=0.963;SOR=0.709 GT:AD:DP:GQ:PL 0/1:15,13:28:99:323,0,389 chr1 15993462 . C T 239.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.020;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.13;ReadPosRankSum=-0.736;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,8:14:99:268,0,208 chr1 15993533 . G A 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=-0.674;SOR=0.132 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,107 chr1 15994004 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 15996072 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 15996090 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 15997280 . A C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 15997436 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 16004321 . C T 2506.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.167;ClippingRankSum=0.000;DP=205;ExcessHet=3.0103;FS=1.716;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.23;ReadPosRankSum=1.445;SOR=0.825 GT:AD:DP:GQ:PL 0/1:107,98:205:99:2535,0,2687 chr1 16004406 . C T 1530.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.878;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=3.770;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-1.740;SOR=1.357 GT:AD:DP:GQ:PL 0/1:43,48:91:99:1559,0,1250 chr1 16004442 . C T 659.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.018;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.94;ReadPosRankSum=1.163;SOR=0.926 GT:AD:DP:GQ:PL 0/1:30,21:51:99:688,0,993 chr1 16006076 . C T 4420.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.029;ClippingRankSum=0.000;DP=339;ExcessHet=3.0103;FS=2.334;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.08;ReadPosRankSum=0.984;SOR=0.844 GT:AD:DP:GQ:PL 0/1:180,158:338:99:4449,0,5173 chr1 16015154 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 16015238 . T C 190.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.105;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.67;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:6,7:13:99:219,0,212 chr1 16015651 . T C 2021.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.134;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.55;ReadPosRankSum=-0.009;SOR=0.676 GT:AD:DP:GQ:PL 0/1:64,75:139:99:2050,0,1676 chr1 16015742 . A G 862.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.261;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=3.628;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.50;ReadPosRankSum=-1.870;SOR=1.247 GT:AD:DP:GQ:PL 0/1:42,33:75:99:891,0,1173 chr1 16015855 . A T 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=-0.175;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,147 chr1 16016353 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16016802 . C T 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.319;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.72;ReadPosRankSum=0.792;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,2:8:66:66,0,416 chr1 16016827 . T C 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.875;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.16;ReadPosRankSum=-1.501;SOR=1.112 GT:AD:DP:GQ:PL 0/1:7,4:11:99:140,0,449 chr1 16017320 . C A 669.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.380;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.34;ReadPosRankSum=0.378;SOR=0.648 GT:AD:DP:GQ:PL 0/1:21,20:41:99:698,0,692 chr1 16017340 . C T 297.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.495;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.91;ReadPosRankSum=1.425;SOR=0.622 GT:AD:DP:GQ:PL 0/1:13,12:25:99:326,0,466 chr1 16017865 . A G 1289.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.604;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.75;ReadPosRankSum=-0.390;SOR=0.647 GT:AD:DP:GQ:PL 0/1:70,50:120:99:1318,0,1914 chr1 16017907 . G A 1158.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.394;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.82;ReadPosRankSum=1.085;SOR=0.651 GT:AD:DP:GQ:PL 0/1:71,47:118:99:1187,0,1942 chr1 16017999 . G A 1052.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.004;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=5.100;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.74;ReadPosRankSum=0.200;SOR=1.197 GT:AD:DP:GQ:PL 0/1:58,40:98:99:1081,0,1712 chr1 16018130 . C G 577.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.639;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=3.804;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.14;ReadPosRankSum=-0.228;SOR=0.340 GT:AD:DP:GQ:PL 0/1:34,23:57:99:606,0,1100 chr1 16018188 . C T 535.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.525;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.39;ReadPosRankSum=1.909;SOR=0.693 GT:AD:DP:GQ:PL 0/1:20,20:40:99:564,0,601 chr1 16018235 . T C 362.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.068;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.12;ReadPosRankSum=-1.918;SOR=0.914 GT:AD:DP:GQ:PL 0/1:11,13:24:99:391,0,319 chr1 16018363 . C T 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-1.180;SOR=2.258 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,150 chr1 16018873 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.80;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:31:81,0,31 chr1 16018898 . T C 35.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.15;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:64,0,34 chr1 16019124 . T C 454.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.569;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=5.420;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.28;ReadPosRankSum=-0.906;SOR=1.781 GT:AD:DP:GQ:PL 0/1:32,17:49:99:483,0,913 chr1 16019240 . C T 1735.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.593;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=2.118;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.57;ReadPosRankSum=0.101;SOR=0.527 GT:AD:DP:GQ:PL 0/1:82,68:150:99:1764,0,2283 chr1 16019683 . C G 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=4.260;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=0.319;SOR=2.833 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr1 16021588 . A T 74.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.68;ReadPosRankSum=-0.366;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:28:103,0,28 chr1 16022585 . G A 387.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.253;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=4.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.51;ReadPosRankSum=0.377;SOR=2.170 GT:AD:DP:GQ:PL 0/1:18,13:31:99:416,0,488 chr1 16022965 . T C 152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.99;MQRankSum=-2.057;QD=16.97;ReadPosRankSum=-0.241;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:181,0,140 chr1 16023628 . C G 494.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.991;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.51;ReadPosRankSum=-1.515;SOR=0.527 GT:AD:DP:GQ:PL 0/1:8,15:23:99:523,0,265 chr1 16024642 . C G 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.44;ReadPosRankSum=-1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:70,0,37 chr1 16024711 . C T 258.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=6.990;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.88;ReadPosRankSum=-0.493;SOR=4.407 GT:AD:DP:GQ:PL 0/1:2,8:10:53:287,0,53 chr1 16024780 . A G 603.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.254;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=2.648;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.48;ReadPosRankSum=-0.546;SOR=2.043 GT:AD:DP:GQ:PL 0/1:12,19:31:99:632,0,340 chr1 16026442 . G A 639.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.946;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.30;ReadPosRankSum=0.755;SOR=0.719 GT:AD:DP:GQ:PL 0/1:29,23:52:99:668,0,744 chr1 16026905 . T C 1033.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=2.890;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.56;ReadPosRankSum=-0.391;SOR=0.295 GT:AD:DP:GQ:PL 0/1:35,36:71:99:1062,0,1056 chr1 16026987 . A G 280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.026;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.04;ReadPosRankSum=1.099;SOR=0.473 GT:AD:DP:GQ:PL 0/1:11,9:20:99:309,0,331 chr1 16029143 . T A 661.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.137;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=8.463;MLEAC=1;MLEAF=0.500;MQ=57.05;MQRankSum=0.824;QD=14.08;ReadPosRankSum=-1.175;SOR=1.777 GT:AD:DP:GQ:PL 0/1:23,24:47:99:690,0,649 chr1 16030006 . G A 1142.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.600;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=3.879;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.90;ReadPosRankSum=-0.252;SOR=0.388 GT:AD:DP:GQ:PL 0/1:51,45:96:99:1171,0,1433 chr1 16030375 . G A 1007.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.003;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.40;ReadPosRankSum=-0.544;SOR=0.532 GT:AD:DP:GQ:PL 0/1:38,32:70:99:1036,0,1323 chr1 16030953 . A G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.72;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,155 chr1 16030955 . A G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.72;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,155 chr1 16031653 . T C 2360.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.639;ClippingRankSum=0.000;DP=188;ExcessHet=3.0103;FS=1.207;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.56;ReadPosRankSum=0.764;SOR=0.841 GT:AD:DP:GQ:PL 0/1:97,91:188:99:2389,0,2546 chr1 16032025 . T C 392.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.943;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=1.446;MLEAC=1;MLEAF=0.500;MQ=59.93;MQRankSum=-1.292;QD=9.35;ReadPosRankSum=-0.468;SOR=1.144 GT:AD:DP:GQ:PL 0/1:27,15:42:99:421,0,782 chr1 16032190 . C G 1323.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.947;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=0.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.79;ReadPosRankSum=-0.541;SOR=0.825 GT:AD:DP:GQ:PL 0/1:42,54:96:99:1352,0,1057 chr1 16032437 . T C 2146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.421;ClippingRankSum=0.000;DP=174;ExcessHet=3.0103;FS=6.651;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.34;ReadPosRankSum=0.807;SOR=1.188 GT:AD:DP:GQ:PL 0/1:86,88:174:99:2175,0,2129 chr1 16032556 . C A 2062.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.009;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=0.636;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.13;ReadPosRankSum=0.768;SOR=0.777 GT:AD:DP:GQ:PL 0/1:67,79:146:99:2091,0,1712 chr1 16032557 . A G 5619.77 PASS AC=2;AF=1.00;AN=2;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.32;SOR=1.378 GT:AD:DP:GQ:PL 1/1:0,145:145:99:5648,435,0 chr1 16032611 . C T 1298.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.565;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=1.021;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.44;ReadPosRankSum=-0.874;SOR=0.492 GT:AD:DP:GQ:PL 0/1:33,46:79:99:1327,0,901 chr1 16032628 . A G 886.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.918;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=5.777;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.30;ReadPosRankSum=-0.376;SOR=0.169 GT:AD:DP:GQ:PL 0/1:29,33:62:99:915,0,884 chr1 16033332 . A G 587.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.257;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=1.386;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.47;ReadPosRankSum=0.431;SOR=0.997 GT:AD:DP:GQ:PL 0/1:17,21:38:99:616,0,545 chr1 16033821 . A T 662.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.185;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=23.780;MLEAC=1;MLEAF=0.500;MQ=50.66;MQRankSum=-1.969;QD=19.49;ReadPosRankSum=1.283;SOR=4.511 GT:AD:DP:GQ:PL 0/1:15,19:34:99:691,0,512 chr1 16035242 . A G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.297;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.97;MQRankSum=-1.814;QD=2.62;ReadPosRankSum=-0.505;SOR=0.836 GT:AD:DP:GQ:PL 0/1:16,3:19:78:78,0,896 chr1 16035253 . T C 183.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.674;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=2.793;MLEAC=1;MLEAF=0.500;MQ=40.02;MQRankSum=-1.085;QD=7.99;ReadPosRankSum=-2.830;SOR=1.828 GT:AD:DP:GQ:PL 0/1:16,7:23:99:212,0,884 chr1 16035380 . A G 3335.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.88;QD=26.51;SOR=2.885 GT:AD:DP:GQ:PL 1/1:0,90:90:99:3364,271,0 chr1 16035421 . G A 2383.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.867;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=8.497;MLEAC=1;MLEAF=0.500;MQ=49.92;MQRankSum=0.401;QD=14.99;ReadPosRankSum=-0.377;SOR=1.294 GT:AD:DP:GQ:PL 0/1:70,89:159:99:2412,0,1649 chr1 16035624 . T C 1420.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.342;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.31;MQRankSum=-5.275;QD=26.31;ReadPosRankSum=-0.933;SOR=0.885 GT:AD:DP:GQ:PL 0/1:19,35:54:99:1449,0,978 chr1 16035630 . G C 1215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.053;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.63;MQRankSum=-5.449;QD=26.43;ReadPosRankSum=-0.899;SOR=0.500 GT:AD:DP:GQ:PL 0/1:17,29:46:99:1244,0,991 chr1 16035633 . C T 1096.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.507;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.00;MQRankSum=-5.738;QD=24.93;ReadPosRankSum=-0.712;SOR=0.446 GT:AD:DP:GQ:PL 0/1:17,27:44:99:1125,0,916 chr1 16036048 . C G 4915.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.036;ClippingRankSum=0.000;DP=259;ExcessHet=3.0103;FS=1.136;MLEAC=1;MLEAF=0.500;MQ=51.03;MQRankSum=-11.872;QD=18.98;ReadPosRankSum=-1.469;SOR=0.792 GT:AD:DP:GQ:PL 0/1:129,130:259:99:4944,0,5108 chr1 16036066 . C G 5231.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.517;ClippingRankSum=0.000;DP=315;ExcessHet=3.0103;FS=1.481;MLEAC=1;MLEAF=0.500;MQ=52.54;MQRankSum=-12.068;QD=16.61;ReadPosRankSum=0.179;SOR=0.796 GT:AD:DP:GQ:PL 0/1:165,150:315:99:5260,0,5930 chr1 16036126 . G A 16226.77 PASS AC=2;AF=1.00;AN=2;DP=507;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.52;QD=32.20;SOR=1.116 GT:AD:DP:GQ:PL 1/1:0,504:504:99:16255,1510,0 chr1 16036166 . A C 6772.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.214;ClippingRankSum=0.000;DP=593;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.45;MQRankSum=-8.365;QD=11.46;ReadPosRankSum=-0.253;SOR=0.654 GT:AD:DP:GQ:PL 0/1:317,274:591:99:6801,0,8283 chr1 16036217 . C T 8544.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.746;ClippingRankSum=0.000;DP=486;ExcessHet=3.0103;FS=2.480;MLEAC=1;MLEAF=0.500;MQ=59.56;MQRankSum=-4.478;QD=17.65;ReadPosRankSum=0.711;SOR=0.901 GT:AD:DP:GQ:PL 0/1:258,226:484:99:8573,0,9984 chr1 16036224 . C T 8234.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.234;ClippingRankSum=0.000;DP=463;ExcessHet=3.0103;FS=2.474;MLEAC=1;MLEAF=0.500;MQ=59.38;MQRankSum=-3.926;QD=17.79;ReadPosRankSum=0.398;SOR=0.873 GT:AD:DP:GQ:PL 0/1:248,215:463:99:8263,0,9770 chr1 16036547 . C T 134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.145;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=19.864;MLEAC=1;MLEAF=0.500;MQ=57.86;MQRankSum=-5.470;QD=4.21;ReadPosRankSum=0.521;SOR=2.785 GT:AD:DP:GQ:PL 0/1:24,8:32:99:163,0,690 chr1 16039651 . A G 296.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.753;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=19.632;MLEAC=1;MLEAF=0.500;MQ=57.28;MQRankSum=-4.010;QD=9.27;ReadPosRankSum=-0.676;SOR=3.429 GT:AD:DP:GQ:PL 0/1:21,11:32:99:325,0,530 chr1 16039672 . G A 183.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.164;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=3.969;MLEAC=1;MLEAF=0.500;MQ=56.25;MQRankSum=-5.082;QD=6.56;ReadPosRankSum=0.188;SOR=1.863 GT:AD:DP:GQ:PL 0/1:20,8:28:99:212,0,513 chr1 16039718 . T C 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.495;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.23;MQRankSum=-3.656;QD=5.84;ReadPosRankSum=-0.653;SOR=0.465 GT:AD:DP:GQ:PL 0/1:15,5:20:99:145,0,471 chr1 16039739 . T G 671.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.96;QD=29.10;SOR=2.712 GT:AD:DP:GQ:PL 1/1:0,17:17:51:700,51,0 chr1 16039870 . C G 38.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.66;MQRankSum=1.345;QD=4.85;ReadPosRankSum=1.803;SOR=1.034 GT:AD:DP:GQ:PL 0/1:5,3:8:67:67,0,150 chr1 16043720 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 16044404 . G A 769.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.74;SOR=2.636 GT:AD:DP:GQ:PL 1/1:0,21:21:63:798,63,0 chr1 16044572 . G T 2107.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=0.854 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2136,195,0 chr1 16044787 . G A 261.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=56.83;MQRankSum=-1.812;QD=18.70;ReadPosRankSum=-1.426;SOR=2.303 GT:AD:DP:GQ:PL 0/1:6,8:14:99:290,0,208 chr1 16045377 . C G 544.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.05;SOR=1.739 GT:AD:DP:GQ:PL 1/1:0,17:17:51:573,51,0 chr1 16045437 . A C 1445.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.50;SOR=2.247 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1474,123,0 chr1 16045508 . G C 2266.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.63;SOR=1.288 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2295,222,0 chr1 16045788 . T G 296.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:27:325,27,0 chr1 16046416 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16046476 . G A 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.12;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 16046629 . A G 2580.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=1.638 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2609,249,0 chr1 16046787 . A G 2233.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.85;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2262,204,0 chr1 16047835 . A G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.33;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 16048038 . G C 1927.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.42;SOR=1.009 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1956,168,0 chr1 16048127 . C G 1548.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.98;SOR=1.157 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1577,150,0 chr1 16048161 . A G 1961.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.25;SOR=1.316 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1990,176,0 chr1 16048499 . C T 5237.77 PASS AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.12;QD=29.03;SOR=1.063 GT:AD:DP:GQ:PL 1/1:0,143:143:99:5266,430,0 chr1 16048568 . C G 7405.77 PASS AC=2;AF=1.00;AN=2;DP=166;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.80;QD=33.94;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,166:166:99:7434,500,0 chr1 16048569 . A C 7405.77 PASS AC=2;AF=1.00;AN=2;DP=165;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.88;QD=35.04;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,165:165:99:7434,500,0 chr1 16048715 . G A 698.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.943;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=1.396;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.26;ReadPosRankSum=0.402;SOR=1.066 GT:AD:DP:GQ:PL 0/1:35,22:57:99:727,0,1141 chr1 16048859 . C T 741.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.25;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:69:770,69,0 chr1 16049343 . C G 1513.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.28;SOR=1.157 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1542,150,0 chr1 16049696 . C T 1535.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.69;QD=30.63;SOR=3.003 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1564,123,0 chr1 16049737 . A T 2796.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.60;QD=32.94;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2825,190,0 chr1 16049783 . G A 3221.77 PASS AC=2;AF=1.00;AN=2;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.81;QD=32.54;SOR=1.145 GT:AD:DP:GQ:PL 1/1:0,99:99:99:3250,296,0 chr1 16049824 . T C 3846.77 PASS AC=2;AF=1.00;AN=2;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.16;SOR=0.918 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3875,348,0 chr1 16049963 . T C 2371.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.88;SOR=1.819 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2400,210,0 chr1 16050224 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 16050321 . C G 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-1.111;SOR=3.258 GT:AD:DP:GQ:PL 0/1:2,4:6:31:149,0,31 chr1 16050336 . C T 276.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.68;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:30:305,30,0 chr1 16050613 . G C 1704.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.018;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=0.601;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.93;ReadPosRankSum=1.517;SOR=0.774 GT:AD:DP:GQ:PL 0/1:90,66:156:99:1733,0,2541 chr1 16052513 . C T 6243.77 PASS AC=2;AF=1.00;AN=2;DP=174;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.27;SOR=2.847 GT:AD:DP:GQ:PL 1/1:0,174:174:99:6272,523,0 chr1 16053701 . T C 6361.77 PASS AC=2;AF=1.00;AN=2;DP=200;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.82;QD=31.81;SOR=1.384 GT:AD:DP:GQ:PL 1/1:0,200:200:99:6390,600,0 chr1 16053748 . A G 2137.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.757;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=3.992;MLEAC=1;MLEAF=0.500;MQ=57.74;MQRankSum=-5.990;QD=16.83;ReadPosRankSum=-1.479;SOR=0.374 GT:AD:DP:GQ:PL 0/1:67,60:127:99:2166,0,2560 chr1 16053757 . C T 1952.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.204;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.44;MQRankSum=-6.345;QD=17.13;ReadPosRankSum=-1.133;SOR=0.716 GT:AD:DP:GQ:PL 0/1:63,51:114:99:1981,0,2529 chr1 16053908 . A T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.24;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 16054065 . G A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,115 chr1 16054087 . C T 38.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.319;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.85;ReadPosRankSum=0.135;SOR=1.034 GT:AD:DP:GQ:PL 0/1:5,3:8:67:67,0,116 chr1 16054139 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.79;ReadPosRankSum=-0.431;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,4:6:66:81,0,66 chr1 16054374 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 16055084 . A G 113.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.169;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.34;ReadPosRankSum=0.000;SOR=0.120 GT:AD:DP:GQ:PL 0/1:6,5:11:99:142,0,194 chr1 16055128 . G A 212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.309;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.52;ReadPosRankSum=0.852;SOR=0.399 GT:AD:DP:GQ:PL 0/1:10,7:17:99:241,0,332 chr1 16055223 . T C 2854.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.34;SOR=3.007 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2883,208,0 chr1 16055227 . C T 778.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.375;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=2.574;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.52;ReadPosRankSum=-0.339;SOR=0.338 GT:AD:DP:GQ:PL 0/1:46,28:74:99:807,0,1535 chr1 16055297 . T A 2090.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.105;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=2.017;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.23;ReadPosRankSum=1.144;SOR=0.903 GT:AD:DP:GQ:PL 0/1:93,78:171:99:2119,0,2477 chr1 16055321 . C T 2463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.949;ClippingRankSum=0.000;DP=204;ExcessHet=3.0103;FS=3.333;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.14;ReadPosRankSum=1.105;SOR=0.939 GT:AD:DP:GQ:PL 0/1:111,92:203:99:2492,0,2887 chr1 16055591 . C T 1456.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.046;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=1.555;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.12;ReadPosRankSum=2.596;SOR=0.884 GT:AD:DP:GQ:PL 0/1:60,51:111:99:1485,0,1839 chr1 16055706 . G A 3011.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.250;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=0.477;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.93;ReadPosRankSum=-0.572;SOR=0.738 GT:AD:DP:GQ:PL 0/1:113,120:233:99:3040,0,2812 chr1 16056010 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 16056089 . T C 128.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:156,12,0 chr1 16056107 . A G 142.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:170,12,0 chr1 16056154 . T C 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=4.260;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.489;SOR=0.061 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr1 16056223 . T C 310.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.80;ReadPosRankSum=-2.065;SOR=0.465 GT:AD:DP:GQ:PL 0/1:12,9:21:99:339,0,516 chr1 16056235 . C T 411.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.224;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.73;ReadPosRankSum=-0.551;SOR=0.368 GT:AD:DP:GQ:PL 0/1:18,12:30:99:440,0,680 chr1 16056296 . G C 863.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.963;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=13.596;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.89;ReadPosRankSum=1.694;SOR=2.569 GT:AD:DP:GQ:PL 0/1:40,27:67:99:892,0,1088 chr1 16056336 . T A 1644.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.955;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=8.788;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.13;ReadPosRankSum=-0.344;SOR=1.609 GT:AD:DP:GQ:PL 0/1:54,42:96:99:1673,0,2195 chr1 16056339 . T A 1704.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.840;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=11.936;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.71;ReadPosRankSum=-3.590;SOR=1.755 GT:AD:DP:GQ:PL 0/1:56,46:102:99:1733,0,2189 chr1 16056382 . A G 4568.77 PASS AC=2;AF=1.00;AN=2;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.60;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,116:116:99:4597,355,0 chr1 16056385 . T A 1431.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.565;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=7.047;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.24;ReadPosRankSum=1.289;SOR=0.594 GT:AD:DP:GQ:PL 0/1:61,56:117:99:1460,0,1685 chr1 16056772 . A G 381.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.681;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.93;ReadPosRankSum=0.624;SOR=0.705 GT:AD:DP:GQ:PL 0/1:15,17:32:99:410,0,379 chr1 16056841 . G C 851.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.31;QD=30.18;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,18:18:60:880,60,0 chr1 16056853 . C T 410.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.301;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=2.066;MLEAC=1;MLEAF=0.500;MQ=53.44;MQRankSum=-1.808;QD=17.12;ReadPosRankSum=-2.182;SOR=0.223 GT:AD:DP:GQ:PL 0/1:8,16:24:99:439,0,246 chr1 16056953 . A C 1492.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.90;QD=29.86;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1521,150,0 chr1 16057020 . C T 691.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.123;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=1.206;MLEAC=1;MLEAF=0.500;MQ=45.08;MQRankSum=-1.990;QD=16.47;ReadPosRankSum=-1.179;SOR=0.478 GT:AD:DP:GQ:PL 0/1:17,25:42:99:720,0,456 chr1 16057079 . A T 245.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.579;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=10.310;MLEAC=1;MLEAF=0.500;MQ=40.77;MQRankSum=-3.178;QD=4.92;ReadPosRankSum=-0.832;SOR=3.245 GT:AD:DP:GQ:PL 0/1:39,11:50:99:274,0,1605 chr1 16057086 . G T 1716.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.206;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=13.063;MLEAC=1;MLEAF=0.500;MQ=40.31;MQRankSum=2.870;QD=31.21;ReadPosRankSum=0.296;SOR=0.029 GT:AD:DP:GQ:PL 0/1:12,43:55:99:1745,0,374 chr1 16057110 . A G 2022.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.724;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=3.119;MLEAC=1;MLEAF=0.500;MQ=42.52;MQRankSum=1.035;QD=26.62;ReadPosRankSum=0.662;SOR=0.320 GT:AD:DP:GQ:PL 0/1:23,53:76:99:2051,0,735 chr1 16057173 . T G 5163.77 PASS AC=2;AF=1.00;AN=2;DP=163;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.31;QD=31.68;SOR=1.482 GT:AD:DP:GQ:PL 1/1:0,163:163:99:5192,489,0 chr1 16057247 . C G 3764.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.570;ClippingRankSum=0.000;DP=225;ExcessHet=3.0103;FS=1.679;MLEAC=1;MLEAF=0.500;MQ=55.21;MQRankSum=-2.596;QD=16.73;ReadPosRankSum=-0.017;SOR=0.755 GT:AD:DP:GQ:PL 0/1:84,141:225:99:3793,0,1923 chr1 16057313 . G C 976.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.984;ClippingRankSum=0.000;DP=174;ExcessHet=3.0103;FS=4.088;MLEAC=1;MLEAF=0.500;MQ=51.81;MQRankSum=-7.758;QD=5.61;ReadPosRankSum=-0.317;SOR=1.069 GT:AD:DP:GQ:PL 0/1:126,48:174:99:1005,0,3880 chr1 16057419 . C T 682.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.132;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=2.237;MLEAC=1;MLEAF=0.500;MQ=51.36;MQRankSum=1.190;QD=8.87;ReadPosRankSum=0.829;SOR=0.437 GT:AD:DP:GQ:PL 0/1:50,27:77:99:711,0,1442 chr1 16057491 . G A 352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.89;MQRankSum=0.934;QD=13.57;ReadPosRankSum=0.338;SOR=0.446 GT:AD:DP:GQ:PL 0/1:15,11:26:99:381,0,548 chr1 16057529 . T A 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=0.711;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:173,0,256 chr1 16057561 . G A 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 16058491 . G T 409.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.100;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.48;MQRankSum=-3.577;QD=16.39;ReadPosRankSum=0.242;SOR=0.960 GT:AD:DP:GQ:PL 0/1:14,11:25:99:438,0,935 chr1 16058503 . G C 526.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.387;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=2.127;MLEAC=1;MLEAF=0.500;MQ=57.79;MQRankSum=-3.068;QD=16.46;ReadPosRankSum=0.447;SOR=1.402 GT:AD:DP:GQ:PL 0/1:18,14:32:99:555,0,1166 chr1 16058504 . G A 526.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.387;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=2.127;MLEAC=1;MLEAF=0.500;MQ=57.79;MQRankSum=-3.068;QD=16.46;ReadPosRankSum=0.467;SOR=1.402 GT:AD:DP:GQ:PL 0/1:18,14:32:99:555,0,1166 chr1 16058547 . G A 685.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.079;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.77;MQRankSum=-0.997;QD=12.47;ReadPosRankSum=-1.000;SOR=0.824 GT:AD:DP:GQ:PL 0/1:31,24:55:99:714,0,963 chr1 16058680 . G A 1378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.966;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=3.033;MLEAC=1;MLEAF=0.500;MQ=44.88;MQRankSum=-0.905;QD=9.57;ReadPosRankSum=2.927;SOR=0.979 GT:AD:DP:GQ:PL 0/1:83,61:144:99:1407,0,1995 chr1 16058753 . C T 1802.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.925;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=2.410;MLEAC=1;MLEAF=0.500;MQ=42.63;MQRankSum=2.860;QD=25.39;ReadPosRankSum=4.867;SOR=0.372 GT:AD:DP:GQ:PL 0/1:23,48:71:99:1831,0,605 chr1 16058755 . A G 2691.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.22;QD=32.73;SOR=1.926 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2720,192,0 chr1 16058828 . A G 1354.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.46;QD=33.17;SOR=1.839 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1383,93,0 chr1 16058835 . G T 1276.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.25;QD=29.45;SOR=1.688 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1305,87,0 chr1 16059302 . C G 7643.77 PASS AC=2;AF=1.00;AN=2;DP=237;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.97;QD=32.25;SOR=1.723 GT:AD:DP:GQ:PL 1/1:0,237:237:99:7672,712,0 chr1 16059320 . G A 2717.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.441;ClippingRankSum=0.000;DP=280;ExcessHet=3.0103;FS=1.541;MLEAC=1;MLEAF=0.500;MQ=53.69;MQRankSum=1.820;QD=9.71;ReadPosRankSum=-0.434;SOR=0.818 GT:AD:DP:GQ:PL 0/1:170,110:280:99:2746,0,4439 chr1 16059485 . G A 9183.77 PASS AC=2;AF=1.00;AN=2;DP=301;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.23;QD=30.92;SOR=1.750 GT:AD:DP:GQ:PL 1/1:0,297:297:99:9212,882,0 chr1 16059513 . T C 8392.77 PASS AC=2;AF=1.00;AN=2;DP=253;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.07;QD=33.17;SOR=2.183 GT:AD:DP:GQ:PL 1/1:0,253:253:99:8421,758,0 chr1 16059752 . T C 714.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.46;QD=32.30;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,18:18:54:743,54,0 chr1 16059921 . G A 2135.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=2.001;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.22;MQRankSum=-0.767;QD=30.08;ReadPosRankSum=2.024;SOR=0.910 GT:AD:DP:GQ:PL 1/1:2,69:71:99:2164,178,0 chr1 16059952 . G C 1801.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.36;QD=31.61;SOR=1.692 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1830,171,0 chr1 16060000 . C T 664.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.246;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=3.592;MLEAC=1;MLEAF=0.500;MQ=51.20;MQRankSum=-0.419;QD=17.97;ReadPosRankSum=0.209;SOR=1.467 GT:AD:DP:GQ:PL 0/1:16,21:37:99:693,0,406 chr1 16060724 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16060950 . A G 89.90 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.98;ReadPosRankSum=-0.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:15:118,0,15 chr1 16060971 . G A 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:63:123,0,63 chr1 16060974 . A G 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:63:123,0,63 chr1 16061979 . G A 194.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.248;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.22;MQRankSum=0.114;QD=17.71;ReadPosRankSum=1.264;SOR=0.293 GT:AD:DP:GQ:PL 0/1:3,8:11:99:223,0,102 chr1 16061990 . T C 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.057;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.963;MLEAC=1;MLEAF=0.500;MQ=44.83;MQRankSum=0.000;QD=6.91;ReadPosRankSum=-1.086;SOR=1.981 GT:AD:DP:GQ:PL 0/1:10,4:14:99:125,0,367 chr1 16062039 . C T 311.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.035;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.25;MQRankSum=-3.253;QD=12.99;ReadPosRankSum=1.877;SOR=0.382 GT:AD:DP:GQ:PL 0/1:12,12:24:99:340,0,361 chr1 16062061 . C T 1456.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.88;QD=31.39;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1485,99,0 chr1 16062070 . C G 691.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.159;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=3.227;MLEAC=1;MLEAF=0.500;MQ=50.43;MQRankSum=4.540;QD=18.70;ReadPosRankSum=0.015;SOR=1.379 GT:AD:DP:GQ:PL 0/1:18,19:37:99:720,0,699 chr1 16062085 . C T 648.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.367;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=1.356;MLEAC=1;MLEAF=0.500;MQ=51.39;MQRankSum=-4.979;QD=15.45;ReadPosRankSum=0.039;SOR=0.384 GT:AD:DP:GQ:PL 0/1:24,18:42:99:677,0,903 chr1 16062151 . T C 1503.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.12;QD=30.69;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1532,147,0 chr1 16062214 . G T 573.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.254;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.15;MQRankSum=-2.571;QD=16.39;ReadPosRankSum=-1.415;SOR=0.732 GT:AD:DP:GQ:PL 0/1:14,21:35:99:602,0,377 chr1 16062242 . G A 357.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.069;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=1.946;MLEAC=1;MLEAF=0.500;MQ=56.57;MQRankSum=3.314;QD=12.78;ReadPosRankSum=-1.045;SOR=0.298 GT:AD:DP:GQ:PL 0/1:15,13:28:99:386,0,508 chr1 16062271 . C T 869.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.49;QD=28.57;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,24:24:72:898,72,0 chr1 16062531 . T C 64.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.49;MQRankSum=0.842;QD=12.95;ReadPosRankSum=-0.126;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:69:93,0,69 chr1 16064493 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16064561 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 16069823 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 16076437 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 16083661 . A C 98.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.645;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.75;ReadPosRankSum=1.645;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:99:127,0,108 chr1 16083675 . C G 95.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.96;ReadPosRankSum=1.834;SOR=3.258 GT:AD:DP:GQ:PL 0/1:2,4:6:99:124,0,188 chr1 16083683 . G C 101.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=6.990;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.35;ReadPosRankSum=1.282;SOR=3.229 GT:AD:DP:GQ:PL 0/1:1,4:5:69:130,0,69 chr1 16084284 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 16103930 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 16104212 . T C 240.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.734;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=8.218;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.38;ReadPosRankSum=-0.324;SOR=0.367 GT:AD:DP:GQ:PL 0/1:7,11:18:99:269,0,204 chr1 16104278 . T C 285.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.020;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.41;ReadPosRankSum=0.522;SOR=0.473 GT:AD:DP:GQ:PL 0/1:6,8:14:99:314,0,368 chr1 16104280 . A G 285.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.105;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.98;ReadPosRankSum=1.065;SOR=0.368 GT:AD:DP:GQ:PL 0/1:6,7:13:99:314,0,368 chr1 16104294 . G A 188.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.16;ReadPosRankSum=0.748;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,6:11:99:217,0,176 chr1 16124918 . C T 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr1 16125272 . G A 2485.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.822;ClippingRankSum=0.000;DP=183;ExcessHet=3.0103;FS=0.584;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.62;ReadPosRankSum=0.163;SOR=0.753 GT:AD:DP:GQ:PL 0/1:82,88:170:99:2514,0,2226 chr1 16138178 . G A 3630.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.848;ClippingRankSum=0.000;DP=241;ExcessHet=3.0103;FS=2.249;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.07;ReadPosRankSum=1.238;SOR=0.864 GT:AD:DP:GQ:PL 0/1:107,134:241:99:3659,0,2872 chr1 16148206 . G A 347.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.84;ReadPosRankSum=-1.082;SOR=1.765 GT:AD:DP:GQ:PL 0/1:4,10:14:99:376,0,125 chr1 16148553 . G A 4714.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.049;ClippingRankSum=0.000;DP=387;ExcessHet=3.0103;FS=1.662;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.18;ReadPosRankSum=-0.565;SOR=0.802 GT:AD:DP:GQ:PL 0/1:212,175:387:99:4743,0,6054 chr1 16148628 . C T 7971.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.160;ClippingRankSum=0.000;DP=462;ExcessHet=3.0103;FS=3.194;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=-0.948;SOR=0.785 GT:AD:DP:GQ:PL 0/1:251,211:462:99:8000,0,9890 chr1 16148631 . C T 8031.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.077;ClippingRankSum=0.000;DP=462;ExcessHet=3.0103;FS=3.194;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.38;ReadPosRankSum=-0.727;SOR=0.769 GT:AD:DP:GQ:PL 0/1:252,210:462:99:8060,0,9907 chr1 16166367 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 16167021 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 16169195 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16169207 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16169351 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 16169376 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 16169419 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 16173418 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 16174490 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16174941 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16175684 . G T 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.000;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr1 16175761 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 16187874 . A G 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr1 16198158 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 16198374 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 16198561 . G T 1810.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.22;SOR=1.278 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1839,174,0 chr1 16199054 . C T 4185.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.73;SOR=1.777 GT:AD:DP:GQ:PL 1/1:0,117:117:99:4214,351,0 chr1 16199392 . G C 1818.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.03;SOR=4.849 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1847,141,0 chr1 16199471 . T C 386.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.68;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:415,30,0 chr1 16201738 . G A 5081.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=38.51;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,138:138:99:5110,414,0 chr1 16202226 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 16202622 . T C 2430.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.30;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2459,218,0 chr1 16203323 . C T 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.85;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr1 16203329 . C T 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.18;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr1 16203370 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 16206308 . G A 7500.77 PASS AC=2;AF=1.00;AN=2;DP=252;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.88;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,251:251:99:7529,741,0 chr1 16206353 . A G 8070.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=0.028;ClippingRankSum=0.000;DP=251;ExcessHet=3.0103;FS=2.055;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.15;ReadPosRankSum=0.954;SOR=0.247 GT:AD:DP:GQ:PL 1/1:4,247:251:99:8099,621,0 chr1 16206527 . C T 1903.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.51;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1932,158,0 chr1 16206601 . C T 601.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.52;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:630,42,0 chr1 16206610 . G C 598.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.31;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:627,42,0 chr1 16206763 . C T 630.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.67;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:66:659,66,0 chr1 16207322 . T C 745.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.01;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:63:774,63,0 chr1 16207507 . C G 5606.77 PASS AC=2;AF=1.00;AN=2;DP=150;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.06;SOR=3.198 GT:AD:DP:GQ:PL 1/1:0,150:150:99:5635,451,0 chr1 16207760 . C G 5668.77 PASS AC=2;AF=1.00;AN=2;DP=153;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.56;SOR=2.758 GT:AD:DP:GQ:PL 1/1:0,153:153:99:5697,460,0 chr1 16208151 . C G 3201.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=1.469 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3230,291,0 chr1 16208235 . G A 1296.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.96;SOR=2.649 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1325,105,0 chr1 16208426 . A G 270.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.85;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:299,24,0 chr1 16209309 . G C 522.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.52;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:551,42,0 chr1 16216680 . A C 4975.77 PASS AC=2;AF=1.00;AN=2;DP=150;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.17;SOR=1.895 GT:AD:DP:GQ:PL 1/1:0,150:150:99:5004,450,0 chr1 16347882 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 16398974 . T C 632.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.833;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.37;ReadPosRankSum=-0.081;SOR=0.723 GT:AD:DP:GQ:PL 0/1:39,22:61:99:661,0,1251 chr1 16405015 . C G 6600.77 PASS AC=2;AF=1.00;AN=2;DP=207;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.89;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,207:207:99:6629,621,0 chr1 16405151 . T C 5168.77 PASS AC=2;AF=1.00;AN=2;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.35;SOR=1.625 GT:AD:DP:GQ:PL 1/1:0,155:155:99:5197,464,0 chr1 16427818 . G C 1478.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.070;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=1.252;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.50;ReadPosRankSum=-0.602;SOR=0.923 GT:AD:DP:GQ:PL 0/1:55,47:102:99:1507,0,1819 chr1 16441011 . T C 605.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.71;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:634,48,0 chr1 16450309 . C T 418.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.70;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:33:447,33,0 chr1 16450373 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 16451770 . G T 3629.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.41;SOR=1.739 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3658,335,0 chr1 16456500 . C T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 16460433 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 16466725 . G T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 16470226 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 16476395 . G A 1030.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.97;QD=32.21;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1059,96,0 chr1 16476772 . T C 376.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.09;QD=34.25;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:33:405,33,0 chr1 16478250 . T C 1027.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.58;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,22:22:72:1056,72,0 chr1 16478258 . T C 1069.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.21;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,25:25:75:1098,75,0 chr1 16482476 . G C 1430.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.79;SOR=1.559 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1459,135,0 chr1 16483760 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 16484576 . T C 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.69;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr1 16486571 . C T 297.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.78;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:30:326,30,0 chr1 16498993 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16499112 . A T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 16499137 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16509644 . A T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.46;MQRankSum=-1.383;QD=11.69;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:75,0,37 chr1 16509664 . C G 67.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.91;MQRankSum=-1.645;QD=13.55;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:96,0,34 chr1 16509718 . T A 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=45.72;MQRankSum=-1.150;QD=23.69;ReadPosRankSum=1.150;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:58:123,0,58 chr1 16509719 . C A 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=45.72;MQRankSum=-1.150;QD=23.69;ReadPosRankSum=1.150;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:58:123,0,58 chr1 16535637 . T C 112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.53;MQRankSum=-2.189;QD=16.11;ReadPosRankSum=-0.108;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,3:7:99:141,0,156 chr1 16535646 . C G 112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.16;MQRankSum=-2.450;QD=14.10;ReadPosRankSum=-0.566;SOR=1.981 GT:AD:DP:GQ:PL 0/1:4,4:8:99:141,0,156 chr1 16535663 . C T 285.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.611;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=3.245;MLEAC=1;MLEAF=0.500;MQ=52.43;MQRankSum=-2.935;QD=15.04;ReadPosRankSum=-0.493;SOR=1.942 GT:AD:DP:GQ:PL 0/1:9,10:19:99:314,0,281 chr1 16535691 . G A 185.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.133;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.93;MQRankSum=-0.382;QD=4.53;ReadPosRankSum=-1.151;SOR=0.661 GT:AD:DP:GQ:PL 0/1:32,9:41:99:214,0,1053 chr1 16535717 . C T 186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.045;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.43;MQRankSum=-0.040;QD=3.06;ReadPosRankSum=-0.711;SOR=0.362 GT:AD:DP:GQ:PL 0/1:51,10:61:99:215,0,1723 chr1 16535801 . G C 3419.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.778;ClippingRankSum=0.000;DP=338;ExcessHet=3.0103;FS=4.492;MLEAC=1;MLEAF=0.500;MQ=43.27;MQRankSum=-3.046;QD=10.12;ReadPosRankSum=2.850;SOR=0.437 GT:AD:DP:GQ:PL 0/1:200,138:338:99:3448,0,5909 chr1 16535959 . T G 6861.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=13.067;ClippingRankSum=0.000;DP=804;ExcessHet=3.0103;FS=16.358;MLEAC=1;MLEAF=0.500;MQ=43.85;MQRankSum=-22.884;QD=8.53;ReadPosRankSum=-5.693;SOR=1.165 GT:AD:DP:GQ:PL 0/1:599,205:804:99:6890,0,30366 chr1 16535966 . T A 6960.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=14.116;ClippingRankSum=0.000;DP=830;ExcessHet=3.0103;FS=8.533;MLEAC=1;MLEAF=0.500;MQ=43.95;MQRankSum=-23.802;QD=8.39;ReadPosRankSum=-6.756;SOR=0.907 GT:AD:DP:GQ:PL 0/1:616,214:830:99:6989,0,30604 chr1 16536007 . A G 4187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=11.781;ClippingRankSum=0.000;DP=883;ExcessHet=3.0103;FS=8.535;MLEAC=1;MLEAF=0.500;MQ=44.70;MQRankSum=-23.240;QD=4.74;ReadPosRankSum=0.675;SOR=1.113 GT:AD:DP:GQ:PL 0/1:667,216:883:99:4216,0,18118 chr1 16536559 . A G 787.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.54;QD=26.96;SOR=3.716 GT:AD:DP:GQ:PL 1/1:0,20:20:60:816,60,0 chr1 16538773 . A G 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=7.068;MLEAC=1;MLEAF=0.500;MQ=58.04;MQRankSum=-1.611;QD=9.10;ReadPosRankSum=0.022;SOR=2.807 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr1 16538875 . G T 469.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.241;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.00;MQRankSum=-0.829;QD=16.20;ReadPosRankSum=1.339;SOR=0.465 GT:AD:DP:GQ:PL 0/1:16,13:29:99:498,0,702 chr1 16538928 . G T 139.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.339;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=9.149;MLEAC=1;MLEAF=0.500;MQ=54.12;MQRankSum=-0.537;QD=3.78;ReadPosRankSum=-0.781;SOR=0.387 GT:AD:DP:GQ:PL 0/1:26,11:37:99:168,0,739 chr1 16538957 . A G 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.539;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=18.352;MLEAC=1;MLEAF=0.500;MQ=51.14;MQRankSum=-0.993;QD=3.47;ReadPosRankSum=0.385;SOR=2.792 GT:AD:DP:GQ:PL 0/1:34,8:42:99:174,0,920 chr1 16540981 . C A 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=41.56;MQRankSum=0.126;QD=18.35;ReadPosRankSum=-0.842;SOR=2.833 GT:AD:DP:GQ:PL 0/1:2,3:5:99:120,0,139 chr1 16545305 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.450;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.85;ReadPosRankSum=-0.366;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:75:75,0,143 chr1 16549068 . A G 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.981;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=5.441;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.82;ReadPosRankSum=1.068;SOR=0.027 GT:AD:DP:GQ:PL 0/1:5,2:7:69:69,0,484 chr1 16549071 . A G 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.981;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=5.441;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.82;ReadPosRankSum=1.465;SOR=0.027 GT:AD:DP:GQ:PL 0/1:5,2:7:69:69,0,484 chr1 16549077 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.645;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.75;ReadPosRankSum=1.036;SOR=0.061 GT:AD:DP:GQ:PL 0/1:3,2:5:72:72,0,417 chr1 16567674 . C A 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.79;MQRankSum=1.718;QD=5.97;ReadPosRankSum=1.068;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,146 chr1 16574752 . G T 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.881;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=4.681;MLEAC=1;MLEAF=0.500;MQ=42.57;MQRankSum=-4.256;QD=2.14;ReadPosRankSum=0.258;SOR=2.015 GT:AD:DP:GQ:PL 0/1:59,12:71:99:180,0,1916 chr1 16575173 . T C 1254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.074;ClippingRankSum=0.000;DP=154;ExcessHet=3.0103;FS=7.359;MLEAC=1;MLEAF=0.500;MQ=48.67;MQRankSum=-4.076;QD=8.15;ReadPosRankSum=2.044;SOR=0.757 GT:AD:DP:GQ:PL 0/1:98,56:154:99:1283,0,2733 chr1 16575219 . G A 4158.77 PASS AC=2;AF=1.00;AN=2;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.46;QD=31.75;SOR=1.521 GT:AD:DP:GQ:PL 1/1:0,131:131:99:4187,393,0 chr1 16576232 . G C 1566.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.887;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=2.709;MLEAC=1;MLEAF=0.500;MQ=40.34;MQRankSum=-2.365;QD=10.45;ReadPosRankSum=0.645;SOR=0.467 GT:AD:DP:GQ:PL 0/1:83,67:150:99:1595,0,2281 chr1 16576255 . T C 508.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.181;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=2.781;MLEAC=1;MLEAF=0.500;MQ=40.14;MQRankSum=-1.770;QD=2.47;ReadPosRankSum=-0.192;SOR=0.979 GT:AD:DP:GQ:PL 0/1:170,36:206:99:537,0,4629 chr1 16576655 . T C 2048.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.77;QD=34.10;SOR=5.747 GT:AD:DP:GQ:PL 1/1:0,54:54:99:2077,162,0 chr1 16577179 . C T 157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.596;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.63;MQRankSum=-3.938;QD=5.63;ReadPosRankSum=-3.694;SOR=1.085 GT:AD:DP:GQ:PL 0/1:22,6:28:99:186,0,1280 chr1 16577188 . T A 221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.885;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=2.599;MLEAC=1;MLEAF=0.500;MQ=50.72;MQRankSum=-4.401;QD=6.93;ReadPosRankSum=-3.050;SOR=1.721 GT:AD:DP:GQ:PL 0/1:24,8:32:99:250,0,1355 chr1 16577191 . G C 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.479;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=6.715;MLEAC=1;MLEAF=0.500;MQ=48.59;MQRankSum=1.519;QD=3.99;ReadPosRankSum=1.911;SOR=0.069 GT:AD:DP:GQ:PL 0/1:31,9:40:99:188,0,1052 chr1 16579483 . C T 170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.602;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=4.393;MLEAC=1;MLEAF=0.500;MQ=43.41;MQRankSum=-2.609;QD=15.52;ReadPosRankSum=0.000;SOR=2.833 GT:AD:DP:GQ:PL 0/1:4,7:11:99:199,0,100 chr1 16580622 . G C 527.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.378;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=1.298;MLEAC=1;MLEAF=0.500;MQ=54.55;MQRankSum=-0.799;QD=8.65;ReadPosRankSum=-0.917;SOR=0.425 GT:AD:DP:GQ:PL 0/1:39,22:61:99:556,0,1192 chr1 16581585 . G A 621.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.286;ClippingRankSum=0.000;DP=191;ExcessHet=3.0103;FS=20.051;MLEAC=1;MLEAF=0.500;MQ=48.80;MQRankSum=-8.431;QD=3.26;ReadPosRankSum=0.525;SOR=0.149 GT:AD:DP:GQ:PL 0/1:147,44:191:99:650,0,4540 chr1 16581620 . A G 1357.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.224;ClippingRankSum=0.000;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.88;MQRankSum=4.260;QD=9.36;ReadPosRankSum=1.452;SOR=0.725 GT:AD:DP:GQ:PL 0/1:93,52:145:99:1386,0,2534 chr1 16581686 . C T 403.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.993;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=46.70;MQRankSum=-6.253;QD=5.77;ReadPosRankSum=3.075;SOR=0.793 GT:AD:DP:GQ:PL 0/1:46,24:70:99:432,0,1394 chr1 16581780 . T G 90.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.273;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=44.81;MQRankSum=-2.408;QD=6.05;ReadPosRankSum=0.088;SOR=1.609 GT:AD:DP:GQ:PL 0/1:10,5:15:99:119,0,356 chr1 16581812 . A C 31.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.112;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.78;MQRankSum=-0.967;QD=3.18;ReadPosRankSum=0.282;SOR=0.976 GT:AD:DP:GQ:PL 0/1:8,2:10:60:60,0,482 chr1 16582419 . G A 182.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=45.36;MQRankSum=-1.647;QD=7.31;ReadPosRankSum=-0.102;SOR=0.223 GT:AD:DP:GQ:PL 0/1:17,8:25:99:211,0,619 chr1 16582494 . C T 98.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.911;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=4.192;MLEAC=1;MLEAF=0.500;MQ=43.85;MQRankSum=-1.576;QD=3.19;ReadPosRankSum=0.158;SOR=0.141 GT:AD:DP:GQ:PL 0/1:23,8:31:99:127,0,695 chr1 16583569 . A G 3802.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.592;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=8.635;MLEAC=1;MLEAF=0.500;MQ=49.11;MQRankSum=-7.643;QD=21.13;ReadPosRankSum=1.042;SOR=1.404 GT:AD:DP:GQ:PL 0/1:54,126:180:99:3831,0,1335 chr1 16585448 . T A 520.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.099;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.20;MQRankSum=0.077;QD=19.29;ReadPosRankSum=-0.661;SOR=0.804 GT:AD:DP:GQ:PL 0/1:13,14:27:99:549,0,591 chr1 16585451 . G A 541.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.760;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.12;MQRankSum=0.074;QD=19.35;ReadPosRankSum=-0.564;SOR=0.914 GT:AD:DP:GQ:PL 0/1:13,15:28:99:570,0,588 chr1 16585804 . A G 85.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.451;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.66;MQRankSum=-4.478;QD=3.43;ReadPosRankSum=0.297;SOR=0.859 GT:AD:DP:GQ:PL 0/1:19,6:25:99:114,0,685 chr1 16585820 . T A 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.923;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.98;MQRankSum=1.496;QD=5.84;ReadPosRankSum=-0.046;SOR=0.976 GT:AD:DP:GQ:PL 0/1:15,5:20:99:145,0,502 chr1 16585835 . C T 565.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.31;QD=25.19;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:594,45,0 chr1 16586589 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.90;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 16586685 . G A 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=40.41;MQRankSum=0.000;QD=13.92;ReadPosRankSum=-0.967;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:70,0,33 chr1 16586921 . G C 690.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.317;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.74;MQRankSum=1.338;QD=10.96;ReadPosRankSum=-0.531;SOR=0.627 GT:AD:DP:GQ:PL 0/1:38,25:63:99:719,0,1199 chr1 16587117 . G A 451.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.204;ClippingRankSum=0.000;DP=174;ExcessHet=3.0103;FS=3.738;MLEAC=1;MLEAF=0.500;MQ=48.68;MQRankSum=-7.594;QD=2.60;ReadPosRankSum=1.388;SOR=1.133 GT:AD:DP:GQ:PL 0/1:142,32:174:99:480,0,4062 chr1 16587665 . G A 4483.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=5.078;ClippingRankSum=0.000;DP=263;ExcessHet=3.0103;FS=6.354;MLEAC=1;MLEAF=0.500;MQ=47.99;MQRankSum=-13.790;QD=17.11;ReadPosRankSum=-0.428;SOR=1.074 GT:AD:DP:GQ:PL 0/1:143,119:262:99:4512,0,5649 chr1 16587673 . C G 4506.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=5.812;ClippingRankSum=0.000;DP=273;ExcessHet=3.0103;FS=7.991;MLEAC=1;MLEAF=0.500;MQ=48.48;MQRankSum=-14.180;QD=16.57;ReadPosRankSum=0.396;SOR=1.147 GT:AD:DP:GQ:PL 0/1:152,120:272:99:4535,0,5866 chr1 16587757 . C T 3192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.904;ClippingRankSum=0.000;DP=408;ExcessHet=3.0103;FS=5.095;MLEAC=1;MLEAF=0.500;MQ=46.94;MQRankSum=-10.193;QD=7.84;ReadPosRankSum=-0.989;SOR=0.860 GT:AD:DP:GQ:PL 0/1:250,157:407:99:3221,0,6583 chr1 16587811 . A G 3616.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.293;ClippingRankSum=0.000;DP=370;ExcessHet=3.0103;FS=2.862;MLEAC=1;MLEAF=0.500;MQ=47.41;MQRankSum=-10.642;QD=9.78;ReadPosRankSum=2.364;SOR=0.861 GT:AD:DP:GQ:PL 0/1:219,151:370:99:3645,0,5933 chr1 16587898 . G T 795.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.842;ClippingRankSum=0.000;DP=199;ExcessHet=3.0103;FS=14.709;MLEAC=1;MLEAF=0.500;MQ=51.70;MQRankSum=-8.232;QD=4.00;ReadPosRankSum=0.352;SOR=1.889 GT:AD:DP:GQ:PL 0/1:156,43:199:99:824,0,5992 chr1 16587901 . C T 2427.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.736;ClippingRankSum=0.000;DP=186;ExcessHet=3.0103;FS=14.076;MLEAC=1;MLEAF=0.500;MQ=51.59;MQRankSum=-12.802;QD=13.05;ReadPosRankSum=-1.271;SOR=1.718 GT:AD:DP:GQ:PL 0/1:109,77:186:99:2456,0,3078 chr1 16587920 . A G 1233.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.404;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=16.448;MLEAC=1;MLEAF=0.500;MQ=51.49;MQRankSum=-11.469;QD=8.57;ReadPosRankSum=0.086;SOR=2.342 GT:AD:DP:GQ:PL 0/1:93,51:144:99:1262,0,2753 chr1 16589863 . G C 1616.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.064;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=10.181;MLEAC=1;MLEAF=0.500;MQ=43.69;MQRankSum=-1.458;QD=22.77;ReadPosRankSum=-0.812;SOR=1.588 GT:AD:DP:GQ:PL 0/1:18,53:71:99:1645,0,280 chr1 16590108 . C A 2828.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=45.07;QD=34.08;SOR=2.010 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2857,248,0 chr1 16590328 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.34;MQRankSum=-0.431;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 16592077 . C T 404.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.635;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.35;MQRankSum=-0.760;QD=7.94;ReadPosRankSum=-1.192;SOR=0.659 GT:AD:DP:GQ:PL 0/1:35,16:51:99:433,0,1136 chr1 16604762 . C T 321.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.196;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.12;MQRankSum=1.428;QD=4.88;ReadPosRankSum=1.025;SOR=0.693 GT:AD:DP:GQ:PL 0/1:48,18:66:99:350,0,1276 chr1 16604995 . C A 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=2.881;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.48;ReadPosRankSum=0.718;SOR=0.197 GT:AD:DP:GQ:PL 0/1:4,8:12:99:286,0,131 chr1 16605059 . T C 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=1.068;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:63:120,0,63 chr1 16605610 . T C 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.92;ReadPosRankSum=-0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:73,0,33 chr1 16605649 . A C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 16606909 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.56;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16608168 . C T 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.70;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 16608312 . C T 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.000;SOR=2.245 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr1 16608410 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 16608788 . T C 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-1.036;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 16608889 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 16610846 . C T 138.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.14;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:167,18,0 chr1 16611139 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 16611163 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 16613222 . G C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 16613670 . C G 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=1.645;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 16613699 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.20;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 16614712 . T C 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr1 16614817 . A G 132.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:161,15,0 chr1 16615572 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16618732 . G T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 16619009 . C T 134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.658;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.88;MQRankSum=-1.106;QD=2.81;ReadPosRankSum=-0.152;SOR=0.836 GT:AD:DP:GQ:PL 0/1:39,9:48:99:163,0,1110 chr1 16619771 . G C 107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.489;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=1.921;MLEAC=1;MLEAF=0.500;MQ=54.21;MQRankSum=1.069;QD=2.84;ReadPosRankSum=1.477;SOR=1.302 GT:AD:DP:GQ:PL 0/1:32,6:38:99:136,0,1070 chr1 16620040 . T C 247.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.818;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=4.434;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.26;ReadPosRankSum=1.277;SOR=1.802 GT:AD:DP:GQ:PL 0/1:13,9:22:99:276,0,341 chr1 16620067 . C A 90.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.951;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.67;ReadPosRankSum=1.548;SOR=0.527 GT:AD:DP:GQ:PL 0/1:12,4:16:99:119,0,419 chr1 16620359 . A G 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr1 16620569 . G C 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=56.04;MQRankSum=1.803;QD=10.10;ReadPosRankSum=1.242;SOR=1.447 GT:AD:DP:GQ:PL 0/1:4,4:8:99:109,0,104 chr1 16621342 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16621505 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16621978 . C T 1247.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.642;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.85;ReadPosRankSum=-1.049;SOR=0.619 GT:AD:DP:GQ:PL 0/1:36,48:84:99:1276,0,933 chr1 16621979 . C G 3369.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.19;SOR=1.039 GT:AD:DP:GQ:PL 1/1:0,85:85:99:3398,256,0 chr1 16622227 . C T 384.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.193;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.73;ReadPosRankSum=-1.635;SOR=0.368 GT:AD:DP:GQ:PL 0/1:9,14:23:99:413,0,307 chr1 16623568 . C A 35.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.015;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.35;MQRankSum=0.812;QD=3.97;ReadPosRankSum=0.447;SOR=0.593 GT:AD:DP:GQ:PL 0/1:6,3:9:64:64,0,155 chr1 16623851 . A C 1654.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.231;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=3.742;MLEAC=1;MLEAF=0.500;MQ=59.68;MQRankSum=1.525;QD=9.97;ReadPosRankSum=1.997;SOR=0.849 GT:AD:DP:GQ:PL 0/1:106,60:166:99:1683,0,2817 chr1 16624014 . G C 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.928;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=10.110;MLEAC=1;MLEAF=0.500;MQ=57.40;MQRankSum=-6.840;QD=2.65;ReadPosRankSum=-1.128;SOR=2.833 GT:AD:DP:GQ:PL 0/1:50,8:58:99:182,0,2835 chr1 16624016 . G C 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.073;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=7.647;MLEAC=1;MLEAF=0.500;MQ=57.62;MQRankSum=-6.690;QD=2.70;ReadPosRankSum=-0.541;SOR=2.613 GT:AD:DP:GQ:PL 0/1:50,7:57:99:182,0,2835 chr1 16624213 . T G 400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.069;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.70;ReadPosRankSum=-0.399;SOR=0.693 GT:AD:DP:GQ:PL 0/1:12,12:24:99:429,0,325 chr1 16624288 . T A 163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.789;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.99;ReadPosRankSum=0.038;SOR=0.725 GT:AD:DP:GQ:PL 0/1:31,10:41:99:192,0,932 chr1 16624385 . T C 811.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.719;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.972;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.53;ReadPosRankSum=-0.561;SOR=0.855 GT:AD:DP:GQ:PL 0/1:33,27:60:99:840,0,1043 chr1 16624394 . G A 123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.980;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=1.322;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.17;ReadPosRankSum=-0.582;SOR=1.153 GT:AD:DP:GQ:PL 0/1:46,11:57:99:152,0,1620 chr1 16624529 . T C 725.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.258;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.72;MQRankSum=-0.624;QD=31.56;ReadPosRankSum=0.049;SOR=1.981 GT:AD:DP:GQ:PL 0/1:3,20:23:54:754,0,54 chr1 16625405 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 16625406 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 16625565 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 16625765 . T C 187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.991;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.71;ReadPosRankSum=0.895;SOR=0.569 GT:AD:DP:GQ:PL 0/1:20,8:28:99:216,0,694 chr1 16625986 . A G 1809.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.821;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.10;ReadPosRankSum=-1.404;SOR=0.741 GT:AD:DP:GQ:PL 0/1:39,61:100:99:1838,0,1010 chr1 16626015 . G A 228.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.417;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=2.283;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.54;ReadPosRankSum=-0.679;SOR=1.009 GT:AD:DP:GQ:PL 0/1:73,17:90:99:257,0,2293 chr1 16626127 . T G 282.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.824;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=9.331;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.79;ReadPosRankSum=-0.908;SOR=0.136 GT:AD:DP:GQ:PL 0/1:45,14:59:99:311,0,1461 chr1 16626208 . C T 370.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.013;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.141;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.00;ReadPosRankSum=1.383;SOR=0.526 GT:AD:DP:GQ:PL 0/1:38,15:53:99:399,0,1257 chr1 16626498 . C G 2276.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.300;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.65;MQRankSum=-1.402;QD=21.89;ReadPosRankSum=-0.178;SOR=0.624 GT:AD:DP:GQ:PL 0/1:22,82:104:99:2305,0,369 chr1 16626626 . C T 2628.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.866;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=2.860;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.86;ReadPosRankSum=1.152;SOR=1.113 GT:AD:DP:GQ:PL 0/1:45,81:126:99:2657,0,1415 chr1 16626917 . C G 469.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.003;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=1.399;MLEAC=1;MLEAF=0.500;MQ=48.73;MQRankSum=-2.261;QD=5.40;ReadPosRankSum=1.628;SOR=0.933 GT:AD:DP:GQ:PL 0/1:68,19:87:99:498,0,2401 chr1 16626929 . G A 173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.68;MQRankSum=-2.195;QD=2.45;ReadPosRankSum=-0.552;SOR=0.637 GT:AD:DP:GQ:PL 0/1:61,10:71:99:202,0,2265 chr1 16627177 . C T 1735.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.440;ClippingRankSum=0.000;DP=314;ExcessHet=3.0103;FS=3.582;MLEAC=1;MLEAF=0.500;MQ=57.13;MQRankSum=0.304;QD=5.55;ReadPosRankSum=-1.121;SOR=0.988 GT:AD:DP:GQ:PL 0/1:237,76:313:99:1764,0,7358 chr1 16627394 . G C 1694.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.201;ClippingRankSum=0.000;DP=402;ExcessHet=3.0103;FS=1.517;MLEAC=1;MLEAF=0.500;MQ=58.31;MQRankSum=-15.054;QD=4.23;ReadPosRankSum=-0.393;SOR=0.921 GT:AD:DP:GQ:PL 0/1:312,89:401:99:1723,0,9834 chr1 16628633 . A G 556.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.103;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=0.784;MLEAC=1;MLEAF=0.500;MQ=59.85;MQRankSum=-2.605;QD=4.22;ReadPosRankSum=-0.825;SOR=0.558 GT:AD:DP:GQ:PL 0/1:102,30:132:99:585,0,2900 chr1 16628722 . C T 428.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.840;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.87;MQRankSum=0.710;QD=2.88;ReadPosRankSum=0.461;SOR=0.626 GT:AD:DP:GQ:PL 0/1:120,29:149:99:457,0,3670 chr1 16628794 . A G 296.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.815;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=4.992;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.72;ReadPosRankSum=1.193;SOR=1.408 GT:AD:DP:GQ:PL 0/1:89,20:109:99:325,0,2743 chr1 16630627 . T C 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.80;QD=32.83;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 16630720 . A G 353.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.30;QD=29.48;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:36:382,36,0 chr1 16630751 . A G 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.160;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.086;MLEAC=1;MLEAF=0.500;MQ=59.58;MQRankSum=0.625;QD=2.24;ReadPosRankSum=0.426;SOR=1.270 GT:AD:DP:GQ:PL 0/1:16,4:20:73:73,0,460 chr1 16630812 . C T 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.506;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=3.647;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.71;ReadPosRankSum=-0.341;SOR=1.565 GT:AD:DP:GQ:PL 0/1:31,8:39:99:173,0,923 chr1 16630951 . T G 1915.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1944,186,0 chr1 16631488 . C T 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.233;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.174;MLEAC=1;MLEAF=0.500;MQ=59.70;MQRankSum=0.815;QD=3.80;ReadPosRankSum=0.494;SOR=0.473 GT:AD:DP:GQ:PL 0/1:46,14:60:99:256,0,1298 chr1 16631568 . C T 103.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.668;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.53;MQRankSum=0.730;QD=2.73;ReadPosRankSum=-1.262;SOR=0.563 GT:AD:DP:GQ:PL 0/1:31,7:38:99:132,0,1141 chr1 16631569 . A G 1022.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.870;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.53;MQRankSum=-0.754;QD=26.91;ReadPosRankSum=-0.756;SOR=1.082 GT:AD:DP:GQ:PL 0/1:9,29:38:99:1051,0,181 chr1 16631646 . G A 59.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.105;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.869;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.98;ReadPosRankSum=0.466;SOR=0.086 GT:AD:DP:GQ:PL 0/1:11,4:15:88:88,0,380 chr1 16631660 . C T 56.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.505;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=6.117;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.55;ReadPosRankSum=1.550;SOR=0.072 GT:AD:DP:GQ:PL 0/1:12,4:16:85:85,0,385 chr1 16633020 . G A 54.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.91;ReadPosRankSum=-0.098;SOR=0.425 GT:AD:DP:GQ:PL 0/1:11,3:14:83:83,0,417 chr1 16633056 . T C 201.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.415;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.76;ReadPosRankSum=0.027;SOR=0.409 GT:AD:DP:GQ:PL 0/1:17,9:26:99:230,0,530 chr1 16633107 . C T 531.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.300;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=2.659;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.85;ReadPosRankSum=0.830;SOR=0.382 GT:AD:DP:GQ:PL 0/1:28,21:49:99:560,0,771 chr1 16633117 . A G 748.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.880;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.87;MQRankSum=-0.914;QD=13.14;ReadPosRankSum=1.599;SOR=0.683 GT:AD:DP:GQ:PL 0/1:27,30:57:99:777,0,741 chr1 16633319 . C T 328.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.857;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=5.558;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.65;ReadPosRankSum=0.452;SOR=0.155 GT:AD:DP:GQ:PL 0/1:27,16:43:99:357,0,896 chr1 16633339 . G T 206.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.684;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=5.281;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.27;ReadPosRankSum=-0.695;SOR=2.391 GT:AD:DP:GQ:PL 0/1:25,8:33:99:235,0,806 chr1 16635268 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 16636738 . T C 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.566;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,112 chr1 16636854 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 16636932 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 16637412 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 16637437 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 16637688 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 16638302 . G T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 16638842 . G C 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=-0.253;SOR=1.447 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr1 16639637 . C G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.77;MQRankSum=-1.645;QD=7.95;ReadPosRankSum=1.036;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 16642625 . A G 1336.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.085;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=45.54;MQRankSum=-4.315;QD=9.09;ReadPosRankSum=-1.540;SOR=0.620 GT:AD:DP:GQ:PL 0/1:101,46:147:99:1365,0,3721 chr1 16642650 . T C 1581.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.191;ClippingRankSum=0.000;DP=209;ExcessHet=3.0103;FS=3.727;MLEAC=1;MLEAF=0.500;MQ=49.70;MQRankSum=1.552;QD=7.68;ReadPosRankSum=0.856;SOR=0.322 GT:AD:DP:GQ:PL 0/1:148,58:206:99:1610,0,5432 chr1 16642751 . G A 7868.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.957;ClippingRankSum=0.000;DP=751;ExcessHet=3.0103;FS=0.550;MLEAC=1;MLEAF=0.500;MQ=58.86;MQRankSum=-8.147;QD=10.51;ReadPosRankSum=0.087;SOR=0.746 GT:AD:DP:GQ:PL 0/1:433,316:749:99:7897,0,11872 chr1 16642886 . C T 22637.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.565;ClippingRankSum=0.000;DP=982;ExcessHet=3.0103;FS=0.616;MLEAC=1;MLEAF=0.500;MQ=53.49;MQRankSum=-14.423;QD=23.08;ReadPosRankSum=0.110;SOR=0.593 GT:AD:DP:GQ:PL 0/1:236,745:981:99:22666,0,4957 chr1 16643220 . A G 1692.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.681;ClippingRankSum=0.000;DP=176;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.98;MQRankSum=1.016;QD=9.62;ReadPosRankSum=-0.433;SOR=0.602 GT:AD:DP:GQ:PL 0/1:117,59:176:99:1721,0,3841 chr1 16644262 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 16644289 . G T 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=-0.842;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,81 chr1 16644574 . G C 296.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.98;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:33:325,33,0 chr1 16644816 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 16644876 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 16645058 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.55;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 16645298 . G C 749.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.622;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=6.430;MLEAC=1;MLEAF=0.500;MQ=56.43;MQRankSum=-4.023;QD=13.15;ReadPosRankSum=-0.933;SOR=0.126 GT:AD:DP:GQ:PL 0/1:31,26:57:99:778,0,1061 chr1 16645367 . A G 2081.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.343;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.86;MQRankSum=-2.773;QD=17.06;ReadPosRankSum=-0.410;SOR=0.880 GT:AD:DP:GQ:PL 0/1:61,61:122:99:2110,0,2114 chr1 16645371 . G T 3856.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.780;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=3.309;MLEAC=1;MLEAF=0.500;MQ=58.99;MQRankSum=-1.666;QD=30.61;ReadPosRankSum=-0.639;SOR=1.609 GT:AD:DP:GQ:PL 0/1:26,100:126:99:3885,0,605 chr1 16645453 . C G 6102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.948;ClippingRankSum=0.000;DP=462;ExcessHet=3.0103;FS=2.315;MLEAC=1;MLEAF=0.500;MQ=59.57;MQRankSum=-3.696;QD=13.21;ReadPosRankSum=0.854;SOR=0.495 GT:AD:DP:GQ:PL 0/1:257,205:462:99:6131,0,8396 chr1 16645572 . C T 3669.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.364;ClippingRankSum=0.000;DP=1119;ExcessHet=3.0103;FS=5.194;MLEAC=1;MLEAF=0.500;MQ=50.09;MQRankSum=-5.849;QD=3.28;ReadPosRankSum=0.418;SOR=0.998 GT:AD:DP:GQ:PL 0/1:962,157:1119:99:3698,0,47167 chr1 16645573 . A G 3667.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.979;ClippingRankSum=0.000;DP=1120;ExcessHet=3.0103;FS=5.194;MLEAC=1;MLEAF=0.500;MQ=50.04;MQRankSum=-5.641;QD=3.27;ReadPosRankSum=0.489;SOR=0.967 GT:AD:DP:GQ:PL 0/1:962,158:1120:99:3696,0,47174 chr1 16645639 . C T 4186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.300;ClippingRankSum=0.000;DP=919;ExcessHet=3.0103;FS=7.904;MLEAC=1;MLEAF=0.500;MQ=51.38;MQRankSum=-15.861;QD=4.69;ReadPosRankSum=-0.775;SOR=1.305 GT:AD:DP:GQ:PL 0/1:689,203:892:99:4215,0,20299 chr1 16645799 . T C 800.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.381;ClippingRankSum=0.000;DP=164;ExcessHet=3.0103;FS=1.514;MLEAC=1;MLEAF=0.500;MQ=55.63;MQRankSum=-8.118;QD=4.97;ReadPosRankSum=2.800;SOR=0.329 GT:AD:DP:GQ:PL 0/1:126,35:161:99:829,0,4455 chr1 16645843 . T C 517.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.453;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=7.001;MLEAC=1;MLEAF=0.500;MQ=53.84;MQRankSum=-2.146;QD=4.88;ReadPosRankSum=0.029;SOR=2.215 GT:AD:DP:GQ:PL 0/1:85,21:106:99:546,0,3208 chr1 16645972 . C T 112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.352;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=3.041;MLEAC=1;MLEAF=0.500;MQ=50.94;MQRankSum=-0.203;QD=8.67;ReadPosRankSum=-1.525;SOR=2.215 GT:AD:DP:GQ:PL 0/1:9,4:13:99:141,0,345 chr1 16645975 . T C 112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.139;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=2.881;MLEAC=1;MLEAF=0.500;MQ=50.11;MQRankSum=-0.058;QD=9.40;ReadPosRankSum=-2.071;SOR=1.721 GT:AD:DP:GQ:PL 0/1:8,4:12:99:141,0,345 chr1 16645981 . G A 73.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.248;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.11;MQRankSum=-0.679;QD=6.71;ReadPosRankSum=-1.602;SOR=1.371 GT:AD:DP:GQ:PL 0/1:8,3:11:99:102,0,327 chr1 16645994 . C A 198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.515;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=46.44;MQRankSum=-2.515;QD=22.09;ReadPosRankSum=-0.366;SOR=0.804 GT:AD:DP:GQ:PL 0/1:3,6:9:99:227,0,102 chr1 16646031 . G T 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=52.13;MQRankSum=-1.834;QD=6.29;ReadPosRankSum=0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,115 chr1 16646425 . C T 10138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.616;ClippingRankSum=0.000;DP=867;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.99;MQRankSum=0.927;QD=11.71;ReadPosRankSum=0.721;SOR=0.708 GT:AD:DP:GQ:PL 0/1:467,399:866:99:10167,0,12466 chr1 16646445 . G A 2181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.741;ClippingRankSum=0.000;DP=908;ExcessHet=3.0103;FS=0.712;MLEAC=1;MLEAF=0.500;MQ=59.99;MQRankSum=-2.201;QD=2.40;ReadPosRankSum=0.940;SOR=0.559 GT:AD:DP:GQ:PL 0/1:753,155:908:99:2210,0,21651 chr1 16646657 . A G 2696.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.172;ClippingRankSum=0.000;DP=751;ExcessHet=3.0103;FS=2.288;MLEAC=1;MLEAF=0.500;MQ=59.67;MQRankSum=-12.811;QD=3.60;ReadPosRankSum=0.882;SOR=0.917 GT:AD:DP:GQ:PL 0/1:601,148:749:99:2725,0,17267 chr1 16646689 . G A 2474.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.825;ClippingRankSum=0.000;DP=729;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.69;MQRankSum=-4.849;QD=3.40;ReadPosRankSum=0.530;SOR=0.692 GT:AD:DP:GQ:PL 0/1:580,147:727:99:2503,0,16951 chr1 16647424 . A G 3073.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-7.436;ClippingRankSum=0.000;DP=994;ExcessHet=3.0103;FS=14.234;MLEAC=1;MLEAF=0.500;MQ=42.28;MQRankSum=-5.936;QD=3.09;ReadPosRankSum=1.780;SOR=0.632 GT:AD:DP:GQ:PL 0/1:761,233:994:99:3102,0,20593 chr1 16647526 . G A 1990.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.707;ClippingRankSum=0.000;DP=874;ExcessHet=3.0103;FS=2.553;MLEAC=1;MLEAF=0.500;MQ=46.34;MQRankSum=-8.520;QD=2.28;ReadPosRankSum=-0.469;SOR=0.879 GT:AD:DP:GQ:PL 0/1:725,149:874:99:2019,0,20579 chr1 16647654 . C A 520.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.477;ClippingRankSum=0.000;DP=189;ExcessHet=3.0103;FS=20.257;MLEAC=1;MLEAF=0.500;MQ=42.32;MQRankSum=-6.511;QD=2.76;ReadPosRankSum=0.041;SOR=3.766 GT:AD:DP:GQ:PL 0/1:158,31:189:99:549,0,5337 chr1 16648016 . G A 2777.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.605;ClippingRankSum=0.000;DP=732;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.79;MQRankSum=-2.026;QD=3.79;ReadPosRankSum=0.654;SOR=0.719 GT:AD:DP:GQ:PL 0/1:580,152:732:99:2806,0,16926 chr1 16648142 . T C 6822.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.014;ClippingRankSum=0.000;DP=680;ExcessHet=3.0103;FS=1.805;MLEAC=1;MLEAF=0.500;MQ=40.15;MQRankSum=-7.573;QD=10.03;ReadPosRankSum=-0.236;SOR=0.859 GT:AD:DP:GQ:PL 0/1:395,285:680:99:6851,0,10208 chr1 16648374 . G C 4940.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.170;ClippingRankSum=0.000;DP=398;ExcessHet=3.0103;FS=1.784;MLEAC=1;MLEAF=0.500;MQ=57.72;MQRankSum=-1.135;QD=12.57;ReadPosRankSum=1.019;SOR=0.588 GT:AD:DP:GQ:PL 0/1:218,175:393:99:4969,0,6441 chr1 16649499 . T C 1557.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.343;ClippingRankSum=0.000;DP=449;ExcessHet=3.0103;FS=40.735;MLEAC=1;MLEAF=0.500;MQ=46.59;MQRankSum=-9.689;QD=3.47;ReadPosRankSum=1.030;SOR=1.787 GT:AD:DP:GQ:PL 0/1:363,86:449:99:1586,0,10204 chr1 16649537 . A C 3212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.486;ClippingRankSum=0.000;DP=413;ExcessHet=3.0103;FS=5.617;MLEAC=1;MLEAF=0.500;MQ=52.52;MQRankSum=4.740;QD=7.78;ReadPosRankSum=0.580;SOR=1.117 GT:AD:DP:GQ:PL 0/1:289,124:413:99:3241,0,8232 chr1 16650310 . G A 915.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.176;ClippingRankSum=0.000;DP=210;ExcessHet=3.0103;FS=10.613;MLEAC=1;MLEAF=0.500;MQ=50.81;MQRankSum=-7.398;QD=4.36;ReadPosRankSum=-1.546;SOR=2.291 GT:AD:DP:GQ:PL 0/1:174,36:210:99:944,0,10238 chr1 16650312 . C T 915.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.793;ClippingRankSum=0.000;DP=199;ExcessHet=3.0103;FS=8.698;MLEAC=1;MLEAF=0.500;MQ=51.68;MQRankSum=-7.444;QD=4.60;ReadPosRankSum=-0.703;SOR=1.972 GT:AD:DP:GQ:PL 0/1:166,33:199:99:944,0,10238 chr1 16650330 . C A 434.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.178;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=4.460;MLEAC=1;MLEAF=0.500;MQ=54.95;MQRankSum=-7.673;QD=2.84;ReadPosRankSum=3.516;SOR=1.482 GT:AD:DP:GQ:PL 0/1:129,24:153:99:463,0,4537 chr1 16650528 . C A 132.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.71;QD=26.58;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:161,15,0 chr1 16650588 . T G 61.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.20;QD=20.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:89,9,0 chr1 16658344 . C G 98.77 PASS AC=1;AF=0.500;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.52;QD=32.92;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,2:3:12:81,0,12 chr1 16658430 . G A 113.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.10;MQRankSum=-1.282;QD=18.96;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:72:142,0,72 chr1 16658446 . C T 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.24;MQRankSum=-1.036;QD=18.35;ReadPosRankSum=1.036;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:75:120,0,75 chr1 16658452 . T G 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.24;MQRankSum=-1.036;QD=18.35;ReadPosRankSum=1.036;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:75:120,0,75 chr1 16680437 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.53;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16681360 . C T 343.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.58;QD=34.38;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:30:372,30,0 chr1 16685900 . G A 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.385;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.45;MQRankSum=-2.638;QD=7.68;ReadPosRankSum=-2.394;SOR=1.061 GT:AD:DP:GQ:PL 0/1:7,3:10:99:105,0,285 chr1 16685909 . T G 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.385;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.45;MQRankSum=-2.638;QD=7.68;ReadPosRankSum=-2.394;SOR=1.061 GT:AD:DP:GQ:PL 0/1:7,3:10:99:105,0,285 chr1 16685917 . G A 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.385;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.45;MQRankSum=-2.638;QD=7.68;ReadPosRankSum=-1.834;SOR=1.061 GT:AD:DP:GQ:PL 0/1:7,3:10:99:105,0,285 chr1 16685918 . C T 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.385;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.45;MQRankSum=-2.638;QD=7.68;ReadPosRankSum=-1.569;SOR=1.061 GT:AD:DP:GQ:PL 0/1:7,3:10:99:105,0,285 chr1 16685924 . A G 73.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.097;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.88;MQRankSum=-2.744;QD=6.71;ReadPosRankSum=-1.083;SOR=1.179 GT:AD:DP:GQ:PL 0/1:8,3:11:99:102,0,307 chr1 16685945 . C T 73.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.097;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.88;MQRankSum=-2.744;QD=6.71;ReadPosRankSum=0.381;SOR=1.179 GT:AD:DP:GQ:PL 0/1:8,3:11:99:102,0,307 chr1 16685954 . C T 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.45;MQRankSum=-2.638;QD=7.68;ReadPosRankSum=1.001;SOR=0.892 GT:AD:DP:GQ:PL 0/1:7,3:10:99:105,0,285 chr1 16685957 . C T 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.45;MQRankSum=-2.638;QD=7.68;ReadPosRankSum=1.411;SOR=0.892 GT:AD:DP:GQ:PL 0/1:7,3:10:99:105,0,285 chr1 16685960 . A C 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.45;MQRankSum=-2.638;QD=7.68;ReadPosRankSum=1.411;SOR=0.892 GT:AD:DP:GQ:PL 0/1:7,3:10:99:105,0,285 chr1 16685969 . T C 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.903;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.45;MQRankSum=-2.638;QD=7.68;ReadPosRankSum=1.192;SOR=0.892 GT:AD:DP:GQ:PL 0/1:7,3:10:99:105,0,285 chr1 16685975 . T C 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.015;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.92;MQRankSum=-2.515;QD=8.53;ReadPosRankSum=0.967;SOR=0.593 GT:AD:DP:GQ:PL 0/1:6,3:9:99:105,0,285 chr1 16685978 . C A 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.015;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.92;MQRankSum=-2.515;QD=8.86;ReadPosRankSum=0.480;SOR=0.593 GT:AD:DP:GQ:PL 0/1:6,3:9:99:108,0,243 chr1 16685981 . T C 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.25;MQRankSum=-2.369;QD=9.97;ReadPosRankSum=0.135;SOR=0.307 GT:AD:DP:GQ:PL 0/1:5,3:8:99:108,0,243 chr1 16685986 . T G 82.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.25;MQRankSum=-2.369;QD=10.35;ReadPosRankSum=0.135;SOR=0.307 GT:AD:DP:GQ:PL 0/1:5,3:8:99:111,0,201 chr1 16685987 . T C 82.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.25;MQRankSum=-2.369;QD=10.35;ReadPosRankSum=0.135;SOR=0.307 GT:AD:DP:GQ:PL 0/1:5,3:8:99:111,0,201 chr1 16686019 . G C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.20;MQRankSum=-1.383;QD=12.44;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,78 chr1 16686029 . A G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.32;MQRankSum=-0.967;QD=17.59;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:36:81,0,36 chr1 16686492 . G T 333.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.33;QD=33.38;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:362,30,0 chr1 16696631 . C G 5689.77 PASS AC=2;AF=1.00;AN=2;DP=172;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.69;QD=33.08;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,172:172:99:5718,516,0 chr1 16697016 . C A 6182.77 PASS AC=2;AF=1.00;AN=2;DP=188;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.60;QD=32.89;SOR=2.380 GT:AD:DP:GQ:PL 1/1:0,188:188:99:6211,563,0 chr1 16699456 . C T 396.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.665;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=2.754;MLEAC=1;MLEAF=0.500;MQ=56.25;MQRankSum=-0.209;QD=20.88;ReadPosRankSum=-0.537;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,14:19:99:425,0,152 chr1 16717230 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 16717537 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 16717840 . T G 822.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.47;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,22:22:66:851,66,0 chr1 16717899 . C T 458.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.168;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=0.384;SOR=0.730 GT:AD:DP:GQ:PL 0/1:20,15:35:99:487,0,628 chr1 16717962 . G C 2830.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.77;SOR=2.026 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2859,240,0 chr1 16718016 . T C 5295.77 PASS AC=2;AF=1.00;AN=2;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.89;SOR=1.258 GT:AD:DP:GQ:PL 1/1:0,161:161:99:5324,483,0 chr1 16718167 . G C 2087.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.080;ClippingRankSum=0.000;DP=176;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.85;MQRankSum=-0.453;QD=11.86;ReadPosRankSum=0.516;SOR=0.690 GT:AD:DP:GQ:PL 0/1:92,84:176:99:2116,0,2481 chr1 16718200 . A G 1884.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.300;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=2.461;MLEAC=1;MLEAF=0.500;MQ=59.80;MQRankSum=-0.933;QD=14.39;ReadPosRankSum=0.897;SOR=0.500 GT:AD:DP:GQ:PL 0/1:62,69:131:99:1913,0,1712 chr1 16718598 . G A 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.37;MQRankSum=-0.319;QD=11.44;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:74,0,30 chr1 16718705 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16719699 . A G 176.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.80;MQRankSum=0.524;QD=11.78;ReadPosRankSum=0.203;SOR=0.399 GT:AD:DP:GQ:PL 0/1:9,6:15:99:205,0,319 chr1 16719866 . A T 2895.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.030;ClippingRankSum=0.000;DP=201;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.41;ReadPosRankSum=1.743;SOR=0.707 GT:AD:DP:GQ:PL 0/1:100,101:201:99:2924,0,2883 chr1 16719961 . T C 5818.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.493;ClippingRankSum=0.000;DP=440;ExcessHet=3.0103;FS=2.458;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.22;ReadPosRankSum=-0.854;SOR=0.513 GT:AD:DP:GQ:PL 0/1:220,220:440:99:5847,0,6142 chr1 16720100 . T C 4498.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.081;ClippingRankSum=0.000;DP=356;ExcessHet=3.0103;FS=0.397;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.64;ReadPosRankSum=-1.295;SOR=0.658 GT:AD:DP:GQ:PL 0/1:192,164:356:99:4527,0,5057 chr1 16720118 . C T 3763.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.092;ClippingRankSum=0.000;DP=296;ExcessHet=3.0103;FS=0.450;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.72;ReadPosRankSum=-1.008;SOR=0.658 GT:AD:DP:GQ:PL 0/1:159,137:296:99:3792,0,4605 chr1 16720203 . C G 2045.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.739;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=12.561;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.49;ReadPosRankSum=-0.583;SOR=0.138 GT:AD:DP:GQ:PL 0/1:49,68:117:99:2074,0,1516 chr1 16720301 . G A 943.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.89;QD=32.65;SOR=3.098 GT:AD:DP:GQ:PL 1/1:0,26:26:78:972,78,0 chr1 16720336 . A G 154.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.852;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.73;MQRankSum=0.748;QD=14.07;ReadPosRankSum=2.722;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,6:11:99:183,0,164 chr1 16720579 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 16721030 . C T 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=-0.842;SOR=2.245 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr1 16725809 . G A 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.84;MQRankSum=-0.674;QD=23.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:33:123,0,33 chr1 16725819 . G C 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.03;MQRankSum=-1.036;QD=18.35;ReadPosRankSum=1.645;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:55:120,0,55 chr1 16725873 . T C 83.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.150;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.16;MQRankSum=-0.319;QD=20.96;ReadPosRankSum=-1.150;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:18:112,0,18 chr1 16725904 . A G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.16;MQRankSum=-0.431;QD=17.59;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:36:81,0,36 chr1 16725905 . T C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.16;MQRankSum=-0.431;QD=17.59;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:36:81,0,36 chr1 16725927 . G T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 16725938 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 16726000 . A G 221.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.98;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:250,18,0 chr1 16726023 . T C 221.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.85;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:250,18,0 chr1 16726131 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.16;MQRankSum=-0.431;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 16726144 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.16;MQRankSum=-0.431;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 16727182 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 16727185 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 16727194 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 16727752 . G T 65.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.108;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.40;ReadPosRankSum=-0.652;SOR=0.446 GT:AD:DP:GQ:PL 0/1:4,3:7:94:94,0,242 chr1 16728051 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.01;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 16748826 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.32;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=-0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,290 chr1 16748830 . T A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.32;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,290 chr1 16748833 . A T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.32;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,290 chr1 16757082 . C T 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.41;MQRankSum=-3.201;QD=4.47;ReadPosRankSum=1.175;SOR=0.100 GT:AD:DP:GQ:PL 0/1:39,12:51:99:256,0,1359 chr1 16757102 . G A 493.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.659;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=7.372;MLEAC=1;MLEAF=0.500;MQ=43.94;MQRankSum=-2.331;QD=5.68;ReadPosRankSum=-0.215;SOR=0.058 GT:AD:DP:GQ:PL 0/1:63,24:87:99:522,0,2083 chr1 16757157 . C T 2183.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.067;ClippingRankSum=0.000;DP=241;ExcessHet=3.0103;FS=4.085;MLEAC=1;MLEAF=0.500;MQ=40.12;MQRankSum=-2.243;QD=9.10;ReadPosRankSum=0.944;SOR=1.031 GT:AD:DP:GQ:PL 0/1:145,95:240:99:2212,0,3768 chr1 16758670 . G C 2320.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.20;QD=30.54;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2349,228,0 chr1 16759176 . C G 4592.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.601;ClippingRankSum=0.000;DP=403;ExcessHet=3.0103;FS=4.324;MLEAC=1;MLEAF=0.500;MQ=40.18;MQRankSum=-9.950;QD=11.40;ReadPosRankSum=3.089;SOR=1.027 GT:AD:DP:GQ:PL 0/1:264,139:403:99:4621,0,7538 chr1 16759182 . G A 2209.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.623;ClippingRankSum=0.000;DP=417;ExcessHet=3.0103;FS=2.740;MLEAC=1;MLEAF=0.500;MQ=41.16;MQRankSum=-8.603;QD=5.31;ReadPosRankSum=2.270;SOR=0.958 GT:AD:DP:GQ:PL 0/1:296,120:416:99:2238,0,11422 chr1 16759217 . C T 2233.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-4.374;ClippingRankSum=0.000;DP=453;ExcessHet=3.0103;FS=17.179;MLEAC=1;MLEAF=0.500;MQ=41.70;MQRankSum=-6.630;QD=4.94;ReadPosRankSum=-1.117;SOR=1.514 GT:AD:DP:GQ:PL 0/1:316,136:452:99:2262,0,9002 chr1 16759339 . G T 10691.77 PASS AC=2;AF=1.00;AN=2;DP=340;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.37;QD=31.45;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,340:340:99:10720,1020,0 chr1 16760870 . C G 8186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=9.900;ClippingRankSum=0.000;DP=436;ExcessHet=3.0103;FS=35.441;MLEAC=1;MLEAF=0.500;MQ=41.75;MQRankSum=-17.739;QD=18.82;ReadPosRankSum=-1.304;SOR=2.146 GT:AD:DP:GQ:PL 0/1:169,266:435:99:8215,0,4655 chr1 16760937 . G T 3246.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.657;ClippingRankSum=0.000;DP=870;ExcessHet=3.0103;FS=5.931;MLEAC=1;MLEAF=0.500;MQ=48.02;MQRankSum=3.590;QD=3.73;ReadPosRankSum=0.697;SOR=0.329 GT:AD:DP:GQ:PL 0/1:702,168:870:99:3275,0,19741 chr1 16760970 . G A 12988.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-4.357;ClippingRankSum=0.000;DP=1089;ExcessHet=3.0103;FS=3.257;MLEAC=1;MLEAF=0.500;MQ=48.89;MQRankSum=-14.717;QD=11.94;ReadPosRankSum=2.394;SOR=0.917 GT:AD:DP:GQ:PL 0/1:525,563:1088:99:13017,0,13796 chr1 16761036 . G A 3093.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.341;ClippingRankSum=0.000;DP=1160;ExcessHet=3.0103;FS=0.689;MLEAC=1;MLEAF=0.500;MQ=50.83;MQRankSum=11.644;QD=2.67;ReadPosRankSum=0.620;SOR=0.608 GT:AD:DP:GQ:PL 0/1:954,206:1160:99:3122,0,25935 chr1 16761087 . G A 10058.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=5.556;ClippingRankSum=0.000;DP=872;ExcessHet=3.0103;FS=1.160;MLEAC=1;MLEAF=0.500;MQ=49.50;MQRankSum=-26.011;QD=11.55;ReadPosRankSum=-5.291;SOR=0.821 GT:AD:DP:GQ:PL 0/1:491,380:871:99:10087,0,13556 chr1 16761098 . C T 3312.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.760;ClippingRankSum=0.000;DP=765;ExcessHet=3.0103;FS=0.672;MLEAC=1;MLEAF=0.500;MQ=49.40;MQRankSum=-15.735;QD=4.33;ReadPosRankSum=-3.634;SOR=0.751 GT:AD:DP:GQ:PL 0/1:597,168:765:99:3341,0,17773 chr1 16764634 . G A 613.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.205;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.55;MQRankSum=-1.200;QD=13.34;ReadPosRankSum=-0.486;SOR=0.693 GT:AD:DP:GQ:PL 0/1:23,23:46:99:642,0,670 chr1 16773626 . A G 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.18;MQRankSum=-0.431;QD=12.26;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:65,0,33 chr1 16786369 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.33;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16856620 . A G 301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=3.222;MLEAC=1;MLEAF=0.500;MQ=51.35;MQRankSum=-4.079;QD=14.37;ReadPosRankSum=-0.519;SOR=2.476 GT:AD:DP:GQ:PL 0/1:11,10:21:99:330,0,396 chr1 16856958 . A G 183.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.11;MQRankSum=-3.753;QD=9.19;ReadPosRankSum=-0.333;SOR=0.446 GT:AD:DP:GQ:PL 0/1:11,9:20:99:212,0,385 chr1 16858942 . C T 221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.063;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.78;MQRankSum=-3.548;QD=11.67;ReadPosRankSum=0.369;SOR=0.582 GT:AD:DP:GQ:PL 0/1:10,9:19:99:250,0,327 chr1 16868650 . G C 1697.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.314;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=9.329;MLEAC=1;MLEAF=0.500;MQ=47.40;MQRankSum=-11.542;QD=10.55;ReadPosRankSum=1.512;SOR=1.214 GT:AD:DP:GQ:PL 0/1:86,75:161:99:1726,0,2342 chr1 16868892 . A C 638.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.285;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=2.622;MLEAC=1;MLEAF=0.500;MQ=41.07;MQRankSum=-1.573;QD=5.55;ReadPosRankSum=0.321;SOR=0.922 GT:AD:DP:GQ:PL 0/1:81,34:115:99:667,0,3427 chr1 16868896 . G C 1857.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.379;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=1.470;MLEAC=1;MLEAF=0.500;MQ=41.72;MQRankSum=-2.147;QD=15.88;ReadPosRankSum=1.120;SOR=0.738 GT:AD:DP:GQ:PL 0/1:58,59:117:99:1886,0,1373 chr1 16868918 . C T 1331.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.062;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.694;MLEAC=1;MLEAF=0.500;MQ=42.90;MQRankSum=-2.244;QD=11.68;ReadPosRankSum=-0.927;SOR=0.614 GT:AD:DP:GQ:PL 0/1:55,59:114:99:1360,0,1272 chr1 16868977 . T C 1229.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.391;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.984;MLEAC=1;MLEAF=0.500;MQ=47.99;MQRankSum=-2.882;QD=17.57;ReadPosRankSum=0.744;SOR=0.858 GT:AD:DP:GQ:PL 0/1:27,43:70:99:1258,0,687 chr1 16869012 . A G 403.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.250;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.00;MQRankSum=-0.197;QD=8.97;ReadPosRankSum=0.948;SOR=0.495 GT:AD:DP:GQ:PL 0/1:30,15:45:99:432,0,1124 chr1 16869022 . T G 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.852;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.70;MQRankSum=-4.470;QD=3.89;ReadPosRankSum=0.184;SOR=0.737 GT:AD:DP:GQ:PL 0/1:30,9:39:99:180,0,1114 chr1 16869028 . C T 124.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.371;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.63;MQRankSum=3.036;QD=3.56;ReadPosRankSum=0.041;SOR=0.425 GT:AD:DP:GQ:PL 0/1:28,7:35:99:153,0,1068 chr1 16869040 . G C 667.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.639;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.20;MQRankSum=-3.716;QD=20.87;ReadPosRankSum=-0.288;SOR=0.602 GT:AD:DP:GQ:PL 0/1:13,19:32:99:696,0,412 chr1 16869055 . A G 58.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.612;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.73;MQRankSum=-2.741;QD=2.26;ReadPosRankSum=-0.195;SOR=0.576 GT:AD:DP:GQ:PL 0/1:21,5:26:87:87,0,834 chr1 16869085 . C T 325.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.453;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=3.222;MLEAC=1;MLEAF=0.500;MQ=56.01;MQRankSum=-3.827;QD=15.51;ReadPosRankSum=-0.176;SOR=2.476 GT:AD:DP:GQ:PL 0/1:11,10:21:99:354,0,362 chr1 16869140 . C T 202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.545;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.48;MQRankSum=-3.440;QD=15.60;ReadPosRankSum=0.615;SOR=1.609 GT:AD:DP:GQ:PL 0/1:7,6:13:99:231,0,276 chr1 16869141 . T C 202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.105;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.48;MQRankSum=-3.440;QD=15.60;ReadPosRankSum=0.615;SOR=1.609 GT:AD:DP:GQ:PL 0/1:7,6:13:99:231,0,276 chr1 16870862 . G A 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.48;MQRankSum=-2.369;QD=9.10;ReadPosRankSum=-0.366;SOR=1.270 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,151 chr1 16872203 . A T 162.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.293;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.44;MQRankSum=-3.344;QD=6.51;ReadPosRankSum=0.792;SOR=0.223 GT:AD:DP:GQ:PL 0/1:17,8:25:99:191,0,623 chr1 16872404 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.64;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16883829 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 16883830 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 16889487 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 16905080 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16922005 . A G 542.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.824;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=1.757;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.88;ReadPosRankSum=1.354;SOR=1.230 GT:AD:DP:GQ:PL 0/1:8,18:26:99:571,0,188 chr1 16922390 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.842;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,98 chr1 16922900 . A G 886.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.633;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=3.480;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.42;ReadPosRankSum=0.659;SOR=1.552 GT:AD:DP:GQ:PL 0/1:25,29:54:99:915,0,729 chr1 16924560 . C T 1108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.111;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.803;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.89;ReadPosRankSum=-0.744;SOR=0.593 GT:AD:DP:GQ:PL 0/1:41,45:86:99:1137,0,1114 chr1 16927937 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 16930859 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 16931820 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 16931832 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 16938368 . A G 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=-1.125;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:259,0,134 chr1 16938676 . A G 509.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.016;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=8.670;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.21;ReadPosRankSum=3.060;SOR=0.544 GT:AD:DP:GQ:PL 0/1:12,16:28:99:538,0,341 chr1 16938832 . A G 2166.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.558;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=0.695;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.41;ReadPosRankSum=-0.341;SOR=0.607 GT:AD:DP:GQ:PL 0/1:52,80:132:99:2195,0,1332 chr1 16940153 . C T 319.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.074;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.90;ReadPosRankSum=-1.510;SOR=1.075 GT:AD:DP:GQ:PL 0/1:9,14:23:99:348,0,205 chr1 16940807 . A G 802.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.796;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.02;ReadPosRankSum=-0.372;SOR=0.730 GT:AD:DP:GQ:PL 0/1:51,38:89:99:831,0,1287 chr1 16944256 . G A 874.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.480;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=5.559;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.62;ReadPosRankSum=-0.136;SOR=1.159 GT:AD:DP:GQ:PL 0/1:22,34:56:99:903,0,580 chr1 16945941 . A G 629.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.963;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.11;MQRankSum=-4.067;QD=10.86;ReadPosRankSum=1.255;SOR=0.598 GT:AD:DP:GQ:PL 0/1:34,24:58:99:658,0,888 chr1 16946008 . G T 745.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.160;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.26;MQRankSum=-3.560;QD=11.84;ReadPosRankSum=-0.387;SOR=0.648 GT:AD:DP:GQ:PL 0/1:33,30:63:99:774,0,882 chr1 16946997 . C T 258.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.875;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=4.374;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.95;ReadPosRankSum=0.212;SOR=0.159 GT:AD:DP:GQ:PL 0/1:14,12:26:99:287,0,552 chr1 16946998 . A C 397.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.779;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=4.374;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.30;ReadPosRankSum=-0.242;SOR=1.916 GT:AD:DP:GQ:PL 0/1:12,14:26:99:426,0,462 chr1 16948607 . C G 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-0.431;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 16949127 . G T 293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.370;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=3.222;MLEAC=1;MLEAF=0.500;MQ=45.61;MQRankSum=0.807;QD=19.58;ReadPosRankSum=-0.311;SOR=2.147 GT:AD:DP:GQ:PL 0/1:4,11:15:89:322,0,89 chr1 16950727 . T A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.66;MQRankSum=-0.319;QD=12.69;ReadPosRankSum=-0.674;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 16953527 . A T 379.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.187;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=3.482;MLEAC=1;MLEAF=0.500;MQ=55.28;MQRankSum=0.357;QD=13.10;ReadPosRankSum=0.158;SOR=1.479 GT:AD:DP:GQ:PL 0/1:18,11:29:99:408,0,4701 chr1 16953530 . T C 379.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.012;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=3.482;MLEAC=1;MLEAF=0.500;MQ=55.28;MQRankSum=0.357;QD=13.10;ReadPosRankSum=0.023;SOR=1.479 GT:AD:DP:GQ:PL 0/1:18,11:29:99:408,0,4701 chr1 16953550 . T C 340.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.441;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=1.653;MLEAC=1;MLEAF=0.500;MQ=54.71;MQRankSum=0.404;QD=13.11;ReadPosRankSum=-0.343;SOR=1.270 GT:AD:DP:GQ:PL 0/1:16,10:26:99:369,0,4982 chr1 16953556 . T C 298.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.902;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=7.228;MLEAC=1;MLEAF=0.500;MQ=53.48;MQRankSum=0.343;QD=12.45;ReadPosRankSum=0.368;SOR=2.419 GT:AD:DP:GQ:PL 0/1:16,8:24:99:327,0,4985 chr1 16953562 . G A 301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.500;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=7.196;MLEAC=1;MLEAF=0.500;MQ=52.69;MQRankSum=0.065;QD=12.57;ReadPosRankSum=-0.418;SOR=2.391 GT:AD:DP:GQ:PL 0/1:15,9:24:99:330,0,4863 chr1 16953566 . G T 265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.799;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.172;MLEAC=1;MLEAF=0.500;MQ=51.56;MQRankSum=0.116;QD=12.66;ReadPosRankSum=-0.507;SOR=1.609 GT:AD:DP:GQ:PL 0/1:13,8:21:99:294,0,4598 chr1 16953590 . C T 232.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.505;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=46.75;MQRankSum=0.612;QD=14.55;ReadPosRankSum=-0.217;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,6:16:99:261,0,4025 chr1 16953612 . T C 112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.736;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.29;MQRankSum=0.228;QD=8.67;ReadPosRankSum=0.293;SOR=0.804 GT:AD:DP:GQ:PL 0/1:9,4:13:99:141,0,3328 chr1 16953623 . G T 70.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.79;MQRankSum=-1.030;QD=6.43;ReadPosRankSum=0.992;SOR=0.180 GT:AD:DP:GQ:PL 0/1:8,3:11:99:99,0,3331 chr1 16953625 . G T 73.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.79;MQRankSum=-1.030;QD=6.71;ReadPosRankSum=0.778;SOR=0.180 GT:AD:DP:GQ:PL 0/1:8,3:11:99:102,0,3016 chr1 16954508 . T C 178.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.331;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.52;ReadPosRankSum=1.322;SOR=0.859 GT:AD:DP:GQ:PL 0/1:10,7:17:99:207,0,333 chr1 16955930 . G A 456.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.559;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=2.709;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=-0.980;SOR=0.873 GT:AD:DP:GQ:PL 0/1:23,19:42:99:485,0,665 chr1 16956078 . G A 942.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.381;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.075;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.46;ReadPosRankSum=0.280;SOR=0.811 GT:AD:DP:GQ:PL 0/1:21,33:54:99:971,0,543 chr1 16958527 . A G 552.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.030;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=1.992;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.06;ReadPosRankSum=-0.341;SOR=1.460 GT:AD:DP:GQ:PL 0/1:13,16:29:99:581,0,353 chr1 16958803 . C T 369.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.696;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.33;ReadPosRankSum=-1.558;SOR=0.693 GT:AD:DP:GQ:PL 0/1:15,15:30:99:398,0,434 chr1 16961144 . C T 63.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.189;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.11;ReadPosRankSum=0.566;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,3:7:92:92,0,108 chr1 16965366 . G C 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr1 16967165 . G C 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=-0.842;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr1 16969184 . T C 4778.77 PASS AC=2;AF=1.00;AN=2;DP=148;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.29;SOR=1.141 GT:AD:DP:GQ:PL 1/1:0,148:148:99:4807,444,0 chr1 16970794 . C T 469.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.415;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=29.36;ReadPosRankSum=-0.870;SOR=1.863 GT:AD:DP:GQ:PL 0/1:2,14:16:35:498,0,35 chr1 16972519 . A C 524.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.23;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:553,39,0 chr1 16974953 . C T 783.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.093;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.42;MQRankSum=-0.951;QD=19.12;ReadPosRankSum=-0.107;SOR=1.096 GT:AD:DP:GQ:PL 0/1:17,24:41:99:812,0,553 chr1 16975177 . T C 2294.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.047;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.71;ReadPosRankSum=0.646;SOR=0.683 GT:AD:DP:GQ:PL 0/1:74,82:156:99:2323,0,2053 chr1 16975285 . A G 1760.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.016;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=2.377;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.05;ReadPosRankSum=0.664;SOR=0.539 GT:AD:DP:GQ:PL 0/1:54,63:117:99:1789,0,1471 chr1 16977094 . C T 2849.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.357;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.90;ReadPosRankSum=0.767;SOR=0.711 GT:AD:DP:GQ:PL 0/1:101,104:205:99:2878,0,2869 chr1 16977297 . C T 1631.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.45;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1660,129,0 chr1 16980375 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 16984307 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 16986248 . C T 842.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.759;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=1.022;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.32;ReadPosRankSum=-0.718;SOR=0.862 GT:AD:DP:GQ:PL 0/1:25,30:55:99:871,0,743 chr1 16986662 . G A 1023.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.955;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=1.273;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.51;ReadPosRankSum=0.909;SOR=0.996 GT:AD:DP:GQ:PL 0/1:30,32:62:99:1052,0,1018 chr1 16986848 . G A 1940.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.575;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=0.601;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.28;ReadPosRankSum=-0.051;SOR=0.791 GT:AD:DP:GQ:PL 0/1:73,85:158:99:1969,0,1910 chr1 16986959 . G A 1314.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.643;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=0.713;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.05;ReadPosRankSum=-1.417;SOR=0.821 GT:AD:DP:GQ:PL 0/1:64,55:119:99:1343,0,1914 chr1 16987159 . C T 3543.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.593;ClippingRankSum=0.000;DP=256;ExcessHet=3.0103;FS=0.967;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.84;ReadPosRankSum=0.634;SOR=0.614 GT:AD:DP:GQ:PL 0/1:124,132:256:99:3572,0,3344 chr1 16988207 . C T 8124.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.081;ClippingRankSum=0.000;DP=532;ExcessHet=3.0103;FS=1.795;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.33;ReadPosRankSum=-0.797;SOR=0.562 GT:AD:DP:GQ:PL 0/1:257,273:530:99:8153,0,7637 chr1 16988447 . G A 7092.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.638;ClippingRankSum=0.000;DP=490;ExcessHet=3.0103;FS=0.559;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.50;ReadPosRankSum=0.436;SOR=0.626 GT:AD:DP:GQ:PL 0/1:238,251:489:99:7121,0,6373 chr1 16991570 . T C 1131.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.343;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.86;ReadPosRankSum=-0.820;SOR=0.960 GT:AD:DP:GQ:PL 0/1:25,32:57:99:1160,0,805 chr1 16992516 . G A 2016.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.276;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=0.579;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.37;ReadPosRankSum=-0.397;SOR=0.782 GT:AD:DP:GQ:PL 0/1:88,75:163:99:2045,0,2643 chr1 16992792 . C T 912.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.064;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.846;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.49;ReadPosRankSum=0.429;SOR=0.890 GT:AD:DP:GQ:PL 0/1:49,38:87:99:941,0,1309 chr1 16996703 . A T 254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.496;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=4.228;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.58;ReadPosRankSum=0.882;SOR=0.148 GT:AD:DP:GQ:PL 0/1:12,10:22:99:283,0,333 chr1 16996954 . T C 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.75;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 17001705 . A T 107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.090;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=-0.022;SOR=0.330 GT:AD:DP:GQ:PL 0/1:3,5:8:70:136,0,70 chr1 17001806 . T C 338.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.283;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=1.860;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.40;ReadPosRankSum=0.126;SOR=1.432 GT:AD:DP:GQ:PL 0/1:10,12:22:99:367,0,305 chr1 17005181 . A G 2062.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.748;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=7.658;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.32;ReadPosRankSum=-1.519;SOR=1.314 GT:AD:DP:GQ:PL 0/1:71,73:144:99:2091,0,1850 chr1 17011965 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 17013444 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 17021461 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 17023743 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17027493 . T G 166.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.83;ReadPosRankSum=-0.566;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,6:7:21:195,0,21 chr1 17028892 . T C 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 17032891 . T C 944.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.001;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=1.738;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.50;ReadPosRankSum=-0.856;SOR=0.307 GT:AD:DP:GQ:PL 0/1:26,28:54:99:973,0,840 chr1 17033181 . C A 4389.77 PASS AC=2;AF=1.00;AN=2;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=1.936 GT:AD:DP:GQ:PL 1/1:0,132:132:99:4418,396,0 chr1 17044657 . T C 401.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.205;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.47;ReadPosRankSum=-1.809;SOR=0.963 GT:AD:DP:GQ:PL 0/1:10,13:23:99:430,0,349 chr1 17044999 . C T 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.139;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.56;ReadPosRankSum=0.431;SOR=0.941 GT:AD:DP:GQ:PL 0/1:8,4:12:99:131,0,252 chr1 17054002 . G T 1289.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.24;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1318,120,0 chr1 17064506 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 17064519 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 17064530 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 17065565 . G C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 17068985 . G A 1678.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.288;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.76;ReadPosRankSum=-1.374;SOR=0.693 GT:AD:DP:GQ:PL 0/1:61,61:122:99:1707,0,1859 chr1 17069026 . G A 2958.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.418;ClippingRankSum=0.000;DP=221;ExcessHet=3.0103;FS=0.526;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.51;ReadPosRankSum=1.141;SOR=0.652 GT:AD:DP:GQ:PL 0/1:108,111:219:99:2987,0,2836 chr1 17069518 . T C 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.91;ReadPosRankSum=-1.442;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,5:13:99:170,0,295 chr1 17069913 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.01;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 17070003 . T C 463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.745;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.49;ReadPosRankSum=0.452;SOR=0.693 GT:AD:DP:GQ:PL 0/1:16,16:32:99:492,0,448 chr1 17070208 . T C 2028.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.415;ClippingRankSum=0.000;DP=186;ExcessHet=3.0103;FS=5.179;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.97;ReadPosRankSum=0.257;SOR=1.008 GT:AD:DP:GQ:PL 0/1:103,82:185:99:2057,0,2668 chr1 17070381 . C A 198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.180;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=5.229;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.63;ReadPosRankSum=-0.614;SOR=0.041 GT:AD:DP:GQ:PL 0/1:21,9:30:99:227,0,782 chr1 17071571 . G C 3477.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.091;ClippingRankSum=0.000;DP=194;ExcessHet=3.0103;FS=1.275;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.93;ReadPosRankSum=-0.968;SOR=0.821 GT:AD:DP:GQ:PL 0/1:102,92:194:99:3506,0,6293 chr1 17071574 . T C 3477.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.345;ClippingRankSum=0.000;DP=190;ExcessHet=3.0103;FS=1.308;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.30;ReadPosRankSum=-0.656;SOR=0.807 GT:AD:DP:GQ:PL 0/1:101,89:190:99:3506,0,6293 chr1 17074788 . C T 1040.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.512;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.52;ReadPosRankSum=-0.196;SOR=0.796 GT:AD:DP:GQ:PL 0/1:28,35:63:99:1069,0,778 chr1 17075245 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17075353 . T C 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=-1.668;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,224 chr1 17075621 . G T 2854.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.212;ClippingRankSum=0.000;DP=222;ExcessHet=3.0103;FS=1.665;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.86;ReadPosRankSum=1.159;SOR=0.584 GT:AD:DP:GQ:PL 0/1:115,107:222:99:2883,0,3154 chr1 17075640 . T C 3334.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.730;ClippingRankSum=0.000;DP=239;ExcessHet=3.0103;FS=1.594;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.95;ReadPosRankSum=-0.805;SOR=0.583 GT:AD:DP:GQ:PL 0/1:120,119:239:99:3363,0,3309 chr1 17075664 . G A 4150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.790;ClippingRankSum=0.000;DP=286;ExcessHet=3.0103;FS=1.449;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.51;ReadPosRankSum=-1.895;SOR=0.584 GT:AD:DP:GQ:PL 0/1:143,143:286:99:4179,0,3977 chr1 17075760 . C T 4676.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.236;ClippingRankSum=0.000;DP=354;ExcessHet=3.0103;FS=0.800;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.21;ReadPosRankSum=1.053;SOR=0.717 GT:AD:DP:GQ:PL 0/1:176,178:354:99:4705,0,4600 chr1 17075852 . C T 9353.77 PASS AC=2;AF=1.00;AN=2;DP=289;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.37;SOR=1.017 GT:AD:DP:GQ:PL 1/1:0,289:289:99:9382,868,0 chr1 17075923 . A G 2505.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.118;ClippingRankSum=0.000;DP=164;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.28;ReadPosRankSum=0.333;SOR=0.743 GT:AD:DP:GQ:PL 0/1:72,92:164:99:2534,0,2709 chr1 17075925 . A G 1754.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.283;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.83;ReadPosRankSum=0.332;SOR=0.639 GT:AD:DP:GQ:PL 0/1:93,69:162:99:1783,0,3667 chr1 17076071 . T C 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.000;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 17076111 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.95;ReadPosRankSum=0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:69:78,0,69 chr1 17077769 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17079314 . G A 3535.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.642;ClippingRankSum=0.000;DP=267;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.24;ReadPosRankSum=-1.088;SOR=0.675 GT:AD:DP:GQ:PL 0/1:132,135:267:99:3564,0,3687 chr1 17079421 . C T 3182.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.435;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=7.547;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.65;ReadPosRankSum=0.174;SOR=0.316 GT:AD:DP:GQ:PL 0/1:73,89:162:99:3211,0,2529 chr1 17079454 . C T 2766.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.778;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=6.995;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.87;ReadPosRankSum=0.076;SOR=0.266 GT:AD:DP:GQ:PL 0/1:50,71:121:99:2795,0,1889 chr1 17079520 . C T 1872.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.46;SOR=4.271 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1901,135,0 chr1 17079550 . C T 544.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.141;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.46;ReadPosRankSum=0.942;SOR=1.220 GT:AD:DP:GQ:PL 0/1:11,17:28:99:573,0,341 chr1 17082522 . G A 1012.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.524;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=1.996;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.89;ReadPosRankSum=0.148;SOR=0.476 GT:AD:DP:GQ:PL 0/1:51,42:93:99:1041,0,1577 chr1 17082746 . G A 1215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.754;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.47;ReadPosRankSum=0.014;SOR=0.826 GT:AD:DP:GQ:PL 0/1:42,42:84:99:1244,0,1185 chr1 17082887 . T C 106.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.25;ReadPosRankSum=-1.068;SOR=0.527 GT:AD:DP:GQ:PL 0/1:2,5:7:63:135,0,63 chr1 17083869 . G A 1999.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.711;ClippingRankSum=0.000;DP=186;ExcessHet=3.0103;FS=1.860;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.81;ReadPosRankSum=0.177;SOR=0.555 GT:AD:DP:GQ:PL 0/1:103,82:185:99:2028,0,2766 chr1 17084062 . G A 104.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.48;ReadPosRankSum=-0.903;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:133,0,220 chr1 17086275 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17086626 . A C 4363.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.511;ClippingRankSum=0.000;DP=316;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.81;ReadPosRankSum=-0.532;SOR=0.685 GT:AD:DP:GQ:PL 0/1:155,161:316:99:4392,0,4049 chr1 17086964 . G A 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=1.177;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:259,0,131 chr1 17092388 . A G 6327.77 PASS AC=2;AF=1.00;AN=2;DP=156;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.61;SOR=2.716 GT:AD:DP:GQ:PL 1/1:0,155:155:99:6356,475,0 chr1 17092399 . A G 2671.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.081;ClippingRankSum=0.000;DP=176;ExcessHet=3.0103;FS=1.405;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.27;ReadPosRankSum=0.570;SOR=0.870 GT:AD:DP:GQ:PL 0/1:82,93:175:99:2700,0,2323 chr1 17092529 . G A 4486.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.210;ClippingRankSum=0.000;DP=373;ExcessHet=3.0103;FS=1.219;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=0.177;SOR=0.766 GT:AD:DP:GQ:PL 0/1:189,183:372:99:4515,0,4924 chr1 17092571 . T C 4051.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.433;ClippingRankSum=0.000;DP=312;ExcessHet=3.0103;FS=1.373;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=0.835;SOR=0.782 GT:AD:DP:GQ:PL 0/1:157,155:312:99:4080,0,3939 chr1 17093903 . C G 656.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.233;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.64;ReadPosRankSum=0.206;SOR=1.247 GT:AD:DP:GQ:PL 0/1:21,21:42:99:685,0,681 chr1 17095697 . G A 546.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.381;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=1.388;SOR=1.179 GT:AD:DP:GQ:PL 0/1:24,17:41:99:575,0,844 chr1 17095731 . C T 955.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.388;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=1.281;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.85;ReadPosRankSum=-0.443;SOR=0.489 GT:AD:DP:GQ:PL 0/1:38,31:69:99:984,0,1231 chr1 17095807 . T C 2522.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.055;ClippingRankSum=0.000;DP=172;ExcessHet=3.0103;FS=4.924;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.67;ReadPosRankSum=-0.604;SOR=1.132 GT:AD:DP:GQ:PL 0/1:86,86:172:99:2551,0,2309 chr1 17096115 . A G 570.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.361;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=3.103;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.43;ReadPosRankSum=1.264;SOR=2.206 GT:AD:DP:GQ:PL 0/1:20,17:37:99:599,0,689 chr1 17096165 . C T 167.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.32;ReadPosRankSum=0.643;SOR=0.255 GT:AD:DP:GQ:PL 0/1:12,6:18:99:196,0,446 chr1 17103279 . G T 612.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.020;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.32;ReadPosRankSum=-0.015;SOR=0.409 GT:AD:DP:GQ:PL 0/1:20,20:40:99:641,0,647 chr1 17104782 . G T 650.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.08;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,18:18:54:679,54,0 chr1 17105123 . A G 2005.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.99;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,54:54:99:2034,162,0 chr1 17105186 . C A 531.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.64;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:560,45,0 chr1 17106631 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17106663 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 17118274 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17163088 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 17163142 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 17163207 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 17212457 . C T 120.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:148,12,0 chr1 17212482 . G C 88.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:116,12,0 chr1 17212600 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 17222685 . G A 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.68;ReadPosRankSum=-1.068;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:145,0,104 chr1 17223730 . T C 5517.77 PASS AC=2;AF=1.00;AN=2;DP=178;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.00;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,178:178:99:5546,534,0 chr1 17223808 . T C 2001.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.153;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=2.187;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.71;ReadPosRankSum=-0.266;SOR=0.952 GT:AD:DP:GQ:PL 0/1:73,73:146:99:2030,0,2017 chr1 17224106 . G A 802.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.22;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,20:20:60:831,60,0 chr1 17224539 . A T 1974.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.05;SOR=3.872 GT:AD:DP:GQ:PL 1/1:0,53:53:99:2003,159,0 chr1 17225448 . C A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 17226380 . A G 865.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.92;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,28:28:84:894,84,0 chr1 17228821 . C G 876.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.578;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.63;ReadPosRankSum=-1.588;SOR=0.727 GT:AD:DP:GQ:PL 0/1:59,32:91:99:905,0,1746 chr1 17230544 . T C 1870.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.632;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=0.814;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.56;ReadPosRankSum=0.813;SOR=0.811 GT:AD:DP:GQ:PL 0/1:76,62:138:99:1899,0,2108 chr1 17230638 . A C 3483.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.062;ClippingRankSum=0.000;DP=333;ExcessHet=3.0103;FS=0.833;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.46;ReadPosRankSum=-1.542;SOR=0.636 GT:AD:DP:GQ:PL 0/1:185,148:333:99:3512,0,4588 chr1 17230683 . C T 3860.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.302;ClippingRankSum=0.000;DP=346;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=0.073;SOR=0.714 GT:AD:DP:GQ:PL 0/1:187,159:346:99:3889,0,4813 chr1 17230815 . G A 1047.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.741;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=0.898;SOR=0.596 GT:AD:DP:GQ:PL 0/1:44,35:79:99:1076,0,1463 chr1 17230931 . C G 234.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.259;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=6.021;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.67;ReadPosRankSum=0.997;SOR=0.078 GT:AD:DP:GQ:PL 0/1:6,10:16:99:263,0,203 chr1 17237472 . T C 1639.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.035;ClippingRankSum=0.000;DP=172;ExcessHet=3.0103;FS=1.243;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.53;ReadPosRankSum=-1.481;SOR=0.567 GT:AD:DP:GQ:PL 0/1:101,71:172:99:1668,0,2503 chr1 17238331 . G C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.73;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 17238352 . C T 193.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.39;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:222,15,0 chr1 17238400 . G C 396.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.68;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:425,33,0 chr1 17238495 . T C 681.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.264;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.23;ReadPosRankSum=0.751;SOR=0.598 GT:AD:DP:GQ:PL 0/1:22,20:42:99:710,0,692 chr1 17239036 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 17243791 . T C 340.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.441;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.810;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.20;ReadPosRankSum=1.905;SOR=1.375 GT:AD:DP:GQ:PL 0/1:11,13:24:99:369,0,319 chr1 17243971 . T C 2285.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.896;ClippingRankSum=0.000;DP=178;ExcessHet=3.0103;FS=6.548;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=-0.215;SOR=0.380 GT:AD:DP:GQ:PL 0/1:92,86:178:99:2314,0,2575 chr1 17244646 . T A 815.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.360;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=3.056;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.60;ReadPosRankSum=-2.521;SOR=1.236 GT:AD:DP:GQ:PL 0/1:33,27:60:99:844,0,982 chr1 17249150 . A C 3969.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.822;ClippingRankSum=0.000;DP=309;ExcessHet=3.0103;FS=2.463;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.89;ReadPosRankSum=0.396;SOR=0.559 GT:AD:DP:GQ:PL 0/1:158,150:308:99:3998,0,4180 chr1 17255011 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 17259515 . G A 2826.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.010;ClippingRankSum=0.000;DP=219;ExcessHet=3.0103;FS=9.380;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.03;ReadPosRankSum=0.946;SOR=0.335 GT:AD:DP:GQ:PL 0/1:109,108:217:99:2855,0,3008 chr1 17259639 . A G 4792.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.809;ClippingRankSum=0.000;DP=366;ExcessHet=3.0103;FS=1.695;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=0.292;SOR=0.608 GT:AD:DP:GQ:PL 0/1:180,186:366:99:4821,0,4741 chr1 17260011 . T C 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-0.431;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 17266649 . C G 1381.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.640;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.95;ReadPosRankSum=-1.177;SOR=0.777 GT:AD:DP:GQ:PL 0/1:30,47:77:99:1410,0,784 chr1 17266821 . G A 2194.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.320;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=0.653;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.68;ReadPosRankSum=-1.165;SOR=0.788 GT:AD:DP:GQ:PL 0/1:60,80:140:99:2223,0,1511 chr1 17270686 . A G 755.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.212;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=1.589;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.89;ReadPosRankSum=1.196;SOR=0.334 GT:AD:DP:GQ:PL 0/1:11,29:40:99:784,0,293 chr1 17271226 . A G 905.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.779;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.76;ReadPosRankSum=-0.675;SOR=0.580 GT:AD:DP:GQ:PL 0/1:23,28:51:99:934,0,695 chr1 17274924 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17277942 . C T 3123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.350;ClippingRankSum=0.000;DP=252;ExcessHet=3.0103;FS=2.832;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.45;ReadPosRankSum=-0.225;SOR=0.537 GT:AD:DP:GQ:PL 0/1:132,119:251:99:3152,0,3822 chr1 17280077 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 17281858 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17282953 . G T 1560.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.492;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=8.166;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.15;ReadPosRankSum=0.912;SOR=0.202 GT:AD:DP:GQ:PL 0/1:38,53:91:99:1589,0,1199 chr1 17308541 . G C 2226.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.62;SOR=2.194 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2255,189,0 chr1 17308577 . A G 1458.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.92;SOR=1.954 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1487,129,0 chr1 17308646 . C A 704.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=2.531 GT:AD:DP:GQ:PL 1/1:0,20:20:60:733,60,0 chr1 17308742 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17333940 . T C 1152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.875;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=1.725;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.53;ReadPosRankSum=-1.077;SOR=0.489 GT:AD:DP:GQ:PL 0/1:58,42:100:99:1181,0,1655 chr1 17336687 . T C 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.97;ReadPosRankSum=0.000;SOR=1.802 GT:AD:DP:GQ:PL 0/1:5,2:7:63:63,0,120 chr1 17340052 . G A 389.82 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.878;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.36;ReadPosRankSum=-0.399;SOR=1.863 GT:AD:DP:GQ:PL 0/1:2,14:16:19:418,0,19 chr1 17345906 . G A 879.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.669;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=8.334;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.17;ReadPosRankSum=-1.500;SOR=0.105 GT:AD:DP:GQ:PL 0/1:28,30:58:99:908,0,926 chr1 17347727 . C T 196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.875;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.89;ReadPosRankSum=1.501;SOR=0.148 GT:AD:DP:GQ:PL 0/1:4,7:11:99:225,0,134 chr1 17354782 . T C 2433.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.02;SOR=3.511 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2462,195,0 chr1 17354929 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 17356546 . T C 9955.77 PASS AC=2;AF=1.00;AN=2;DP=299;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.30;SOR=1.306 GT:AD:DP:GQ:PL 1/1:0,299:299:99:9984,897,0 chr1 17356662 . A G 3381.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.55;SOR=3.118 GT:AD:DP:GQ:PL 1/1:0,94:94:99:3410,282,0 chr1 17356786 . C A 356.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.12;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:30:385,30,0 chr1 17358679 . T C 3437.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.97;SOR=1.856 GT:AD:DP:GQ:PL 1/1:0,111:111:99:3466,289,0 chr1 17358971 . C A 1661.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.24;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1690,150,0 chr1 17363459 . C T 489.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.98;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:518,42,0 chr1 17372065 . A C 519.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.60;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,14:14:42:548,42,0 chr1 17372230 . C T 5122.77 PASS AC=2;AF=1.00;AN=2;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=1.656 GT:AD:DP:GQ:PL 1/1:0,154:154:99:5151,462,0 chr1 17372396 . C T 5437.77 PASS AC=2;AF=1.00;AN=2;DP=174;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.16;SOR=1.377 GT:AD:DP:GQ:PL 1/1:0,164:164:99:5466,493,0 chr1 17372466 . T C 2778.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.31;SOR=1.995 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2807,258,0 chr1 17372522 . A G 1435.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1464,120,0 chr1 17372890 . G A 1989.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.03;SOR=7.658 GT:AD:DP:GQ:PL 1/1:0,45:45:99:2018,135,0 chr1 17372968 . C T 4735.77 PASS AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.12;SOR=1.948 GT:AD:DP:GQ:PL 1/1:0,143:143:99:4764,429,0 chr1 17373379 . C A 522.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.58;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:551,42,0 chr1 17373465 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 17381106 . T C 7313.77 PASS AC=2;AF=1.00;AN=2;DP=242;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.22;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,242:242:99:7342,726,0 chr1 17381244 . T C 3274.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.42;SOR=2.208 GT:AD:DP:GQ:PL 1/1:0,98:98:99:3303,294,0 chr1 17381262 . C T 3152.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.17;SOR=2.649 GT:AD:DP:GQ:PL 1/1:0,72:72:99:3181,217,0 chr1 17381263 . G C 3152.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=2.551 GT:AD:DP:GQ:PL 1/1:0,69:69:99:3181,217,0 chr1 17381303 . C T 1612.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.83;SOR=4.271 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1641,134,0 chr1 17381436 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17382271 . T C 802.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.76;SOR=4.712 GT:AD:DP:GQ:PL 1/1:0,21:21:63:831,63,0 chr1 17388143 . A G 726.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.60;SOR=2.030 GT:AD:DP:GQ:PL 1/1:0,23:23:69:755,69,0 chr1 17388215 . A C 1600.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.06;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1629,141,0 chr1 17388369 . T C 4199.77 PASS AC=2;AF=1.00;AN=2;DP=126;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.33;SOR=0.862 GT:AD:DP:GQ:PL 1/1:0,126:126:99:4228,378,0 chr1 17388586 . C T 4790.77 PASS AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.50;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,143:143:99:4819,429,0 chr1 17388640 . T C 5641.77 PASS AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.21;SOR=1.186 GT:AD:DP:GQ:PL 1/1:0,151:151:99:5670,454,0 chr1 17388980 . T C 2718.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.41;SOR=2.332 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2747,237,0 chr1 17390065 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 17390664 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17390817 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17390858 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 17391250 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17391274 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17391368 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 17391399 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 17391873 . C T 890.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.90;SOR=6.273 GT:AD:DP:GQ:PL 1/1:0,22:22:66:919,66,0 chr1 17391923 . T C 1384.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.72;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1413,110,0 chr1 17392254 . C T 3898.77 PASS AC=2;AF=1.00;AN=2;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.50;SOR=2.200 GT:AD:DP:GQ:PL 1/1:0,113:113:99:3927,339,0 chr1 17393665 . C T 369.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.45;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:27:398,27,0 chr1 17393666 . T G 369.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.89;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:398,27,0 chr1 17393943 . T C 10695.77 PASS AC=2;AF=1.00;AN=2;DP=319;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=1.260 GT:AD:DP:GQ:PL 1/1:0,319:319:99:10724,958,0 chr1 17394119 . A C 9407.77 PASS AC=2;AF=1.00;AN=2;DP=269;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.97;SOR=1.024 GT:AD:DP:GQ:PL 1/1:0,269:269:99:9436,807,0 chr1 17394598 . G A 518.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.31;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:547,42,0 chr1 17394892 . C T 2132.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.18;SOR=4.693 GT:AD:DP:GQ:PL 1/1:0,55:55:99:2161,165,0 chr1 17395211 . T G 4065.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.85;SOR=3.564 GT:AD:DP:GQ:PL 1/1:0,94:94:99:4094,282,0 chr1 17395348 . A C 597.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.49;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,15:15:45:626,45,0 chr1 17395931 . A C 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.18;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr1 17395935 . C T 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.85;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr1 17398515 . T C 882.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.52;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,36:36:99:911,107,0 chr1 17398862 . C G 6656.77 PASS AC=2;AF=1.00;AN=2;DP=215;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.96;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,215:215:99:6685,645,0 chr1 17401576 . G A 1366.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.79;SOR=4.863 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1395,105,0 chr1 17401623 . A G 551.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.61;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,15:15:45:580,45,0 chr1 17404621 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17404944 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17410082 . A G 2101.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.99;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,54:54:99:2130,162,0 chr1 17413324 . T C 3155.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.87;SOR=2.160 GT:AD:DP:GQ:PL 1/1:0,96:96:99:3184,287,0 chr1 17413861 . G A 2492.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.47;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2521,210,0 chr1 17421931 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17425593 . C T 4969.77 PASS AC=2;AF=1.00;AN=2;DP=148;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.58;SOR=2.208 GT:AD:DP:GQ:PL 1/1:0,148:148:99:4998,443,0 chr1 17430720 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17439260 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 17457062 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 17457071 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 17506649 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 17515356 . T C 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr1 17574028 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17576055 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17581010 . A G 1612.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.50;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1641,126,0 chr1 17581080 . C T 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.11;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 17581112 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 17587219 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 17588351 . C T 1365.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=2.557;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=12.672;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.07;ReadPosRankSum=0.845;SOR=5.782 GT:AD:DP:GQ:PL 1/1:1,36:37:99:1394,101,0 chr1 17603485 . C G 2293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.443;ClippingRankSum=0.000;DP=173;ExcessHet=3.0103;FS=2.028;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=0.813;SOR=0.865 GT:AD:DP:GQ:PL 0/1:88,85:173:99:2322,0,2532 chr1 17612831 . C G 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.289;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=0.349;SOR=1.329 GT:AD:DP:GQ:PL 0/1:6,6:12:99:180,0,168 chr1 17634317 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.21;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 17634850 . C T 3172.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.688;ClippingRankSum=0.000;DP=216;ExcessHet=3.0103;FS=4.898;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.69;ReadPosRankSum=-1.056;SOR=0.406 GT:AD:DP:GQ:PL 0/1:107,109:216:99:3201,0,3204 chr1 17683617 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 17691027 . T C 1291.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.76;SOR=1.900 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1320,125,0 chr1 17691063 . A G 2048.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.04;SOR=1.284 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2077,198,0 chr1 17691209 . C T 1899.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.23;SOR=1.249 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1928,194,0 chr1 17694911 . T C 7581.77 PASS AC=2;AF=1.00;AN=2;DP=237;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,237:237:99:7610,711,0 chr1 17695372 . T C 780.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.47;SOR=4.712 GT:AD:DP:GQ:PL 1/1:0,21:21:63:809,63,0 chr1 17696617 . A G 313.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:342,27,0 chr1 17696659 . A G 598.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,15:15:45:627,45,0 chr1 17696795 . C T 1659.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.20;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1688,148,0 chr1 17696870 . C T 4753.77 PASS AC=2;AF=1.00;AN=2;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.75;SOR=1.999 GT:AD:DP:GQ:PL 1/1:0,132:132:99:4782,396,0 chr1 17697014 . T C 9859.77 PASS AC=2;AF=1.00;AN=2;DP=290;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.00;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,290:290:99:9888,874,0 chr1 17697195 . A G 8383.77 PASS AC=2;AF=1.00;AN=2;DP=256;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.75;SOR=1.033 GT:AD:DP:GQ:PL 1/1:0,256:256:99:8412,768,0 chr1 17698299 . T G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 17779003 . G A 38.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.150;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:67,0,30 chr1 17823015 . G T 4883.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.340;ClippingRankSum=0.000;DP=346;ExcessHet=3.0103;FS=1.461;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.16;ReadPosRankSum=-0.530;SOR=0.603 GT:AD:DP:GQ:PL 0/1:171,174:345:99:4912,0,4765 chr1 17823071 . C A 6683.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.647;ClippingRankSum=0.000;DP=524;ExcessHet=3.0103;FS=1.114;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.80;ReadPosRankSum=0.074;SOR=0.580 GT:AD:DP:GQ:PL 0/1:263,259:522:99:6712,0,6974 chr1 17836062 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 17837091 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 17837098 . A C 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr1 17839799 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 17852191 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 17854144 . C T 100.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.718;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.40;ReadPosRankSum=-0.566;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:38:129,0,38 chr1 17882567 . T A 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 17893333 . G A 59.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:87,9,0 chr1 17907617 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 17952691 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 17957764 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 17965830 . G C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 17966263 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 17966269 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 18016470 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18038399 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18048231 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 18079333 . A C 86.94 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.39;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:14:115,14,0 chr1 18080131 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18081681 . G A 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 18108024 . G C 140.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.18;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:169,15,0 chr1 18108487 . T C 128.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.46;ReadPosRankSum=-0.967;SOR=0.941 GT:AD:DP:GQ:PL 0/1:1,5:6:24:157,0,24 chr1 18144370 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 18178557 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18195542 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18209906 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 18227851 . T C 1897.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.103;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=0.685;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.65;ReadPosRankSum=-0.427;SOR=0.597 GT:AD:DP:GQ:PL 0/1:72,67:139:99:1926,0,2126 chr1 18227862 . C T 2137.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.426;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=1.364;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.53;ReadPosRankSum=0.290;SOR=0.560 GT:AD:DP:GQ:PL 0/1:83,75:158:99:2166,0,2503 chr1 18273332 . T C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,133 chr1 18273333 . T G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,133 chr1 18322651 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 18323612 . G C 166.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.83;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:195,21,0 chr1 18335089 . T C 2980.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.774;ClippingRankSum=0.000;DP=219;ExcessHet=3.0103;FS=4.170;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.61;ReadPosRankSum=-0.126;SOR=0.451 GT:AD:DP:GQ:PL 0/1:106,113:219:99:3009,0,2855 chr1 18346711 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18359174 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 18359219 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 18373457 . A T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 18376069 . A G 635.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.85;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:51:664,51,0 chr1 18376494 . T C 1819.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.44;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1848,138,0 chr1 18376714 . C G 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.61;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr1 18377050 . G A 10458.77 PASS AC=2;AF=1.00;AN=2;DP=323;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=1.480 GT:AD:DP:GQ:PL 1/1:0,322:322:99:10487,966,0 chr1 18378368 . A G 823.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.867;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.28;ReadPosRankSum=2.074;SOR=0.737 GT:AD:DP:GQ:PL 0/1:36,37:73:99:852,0,871 chr1 18409980 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18424276 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 18432138 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18439569 . A G 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr1 18467263 . C A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 18473753 . A G 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr1 18480643 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 18480845 . T C 1807.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.52;SOR=4.317 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1836,138,0 chr1 18481403 . C G 7548.77 PASS AC=2;AF=1.00;AN=2;DP=227;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.25;SOR=1.353 GT:AD:DP:GQ:PL 1/1:0,227:227:99:7577,681,0 chr1 18481444 . C A 3531.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.280;ClippingRankSum=0.000;DP=275;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=-0.526;SOR=0.697 GT:AD:DP:GQ:PL 0/1:151,124:275:99:3560,0,4460 chr1 18481459 . C A 4595.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.296;ClippingRankSum=0.000;DP=295;ExcessHet=3.0103;FS=0.437;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.58;ReadPosRankSum=0.463;SOR=0.738 GT:AD:DP:GQ:PL 0/1:135,160:295:99:4624,0,3792 chr1 18481798 . C A 8885.77 PASS AC=2;AF=1.00;AN=2;DP=270;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.03;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,269:269:99:8914,807,0 chr1 18481971 . T A 5383.77 PASS AC=2;AF=1.00;AN=2;DP=149;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.25;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,149:149:99:5412,447,0 chr1 18482032 . A C 6105.77 PASS AC=2;AF=1.00;AN=2;DP=168;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.74;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,168:168:99:6134,505,0 chr1 18482217 . G C 2860.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.125;ClippingRankSum=0.000;DP=222;ExcessHet=3.0103;FS=7.475;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.89;ReadPosRankSum=0.421;SOR=0.676 GT:AD:DP:GQ:PL 0/1:116,106:222:99:2889,0,3087 chr1 18483402 . A T 1382.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.70;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1411,102,0 chr1 18483422 . G A 424.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.056;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.34;ReadPosRankSum=0.200;SOR=0.195 GT:AD:DP:GQ:PL 0/1:13,13:26:99:453,0,452 chr1 18483850 . G T 1870.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.11;SOR=2.790 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1899,156,0 chr1 18483990 . G A 3083.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.134;ClippingRankSum=0.000;DP=178;ExcessHet=3.0103;FS=2.615;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.32;ReadPosRankSum=0.302;SOR=0.599 GT:AD:DP:GQ:PL 0/1:96,82:178:99:3112,0,4885 chr1 18483992 . A C 3080.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.938;ClippingRankSum=0.000;DP=173;ExcessHet=3.0103;FS=1.182;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.81;ReadPosRankSum=0.517;SOR=0.598 GT:AD:DP:GQ:PL 0/1:94,79:173:99:3109,0,4923 chr1 18502610 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 18567269 . T C 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 18567274 . A G 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 18589440 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18691637 . A C 369.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.555;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=3.203;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.08;ReadPosRankSum=0.763;SOR=0.089 GT:AD:DP:GQ:PL 0/1:11,12:23:99:398,0,334 chr1 18691911 . G A 1917.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.682;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=5.100;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.78;ReadPosRankSum=-1.663;SOR=0.807 GT:AD:DP:GQ:PL 0/1:116,80:196:99:1946,0,3205 chr1 18691938 . A C 1790.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.232;ClippingRankSum=0.000;DP=193;ExcessHet=3.0103;FS=1.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.28;ReadPosRankSum=0.901;SOR=0.837 GT:AD:DP:GQ:PL 0/1:118,75:193:99:1819,0,3118 chr1 18700745 . A G 916.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.655;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=0.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.79;ReadPosRankSum=1.926;SOR=0.917 GT:AD:DP:GQ:PL 0/1:28,34:62:99:945,0,699 chr1 18703052 . A G 387.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.929;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=5.969;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.86;ReadPosRankSum=-1.936;SOR=0.086 GT:AD:DP:GQ:PL 0/1:9,14:23:99:416,0,307 chr1 18713981 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 18716507 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 18719694 . T C 31.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0 chr1 18720820 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 18721231 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18721268 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 18725995 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,146 chr1 18725997 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,146 chr1 18739738 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18743735 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18744688 . A G 259.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.177;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.37;ReadPosRankSum=0.906;SOR=0.346 GT:AD:DP:GQ:PL 0/1:13,8:21:99:288,0,523 chr1 18744689 . A G 247.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.057;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.26;ReadPosRankSum=0.906;SOR=0.307 GT:AD:DP:GQ:PL 0/1:14,8:22:99:285,0,565 chr1 18769068 . C T 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.022;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.10;ReadPosRankSum=-0.921;SOR=0.799 GT:AD:DP:GQ:PL 0/1:3,5:8:55:117,0,55 chr1 18769252 . A G 95.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.18;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:124,15,0 chr1 18782416 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 18782428 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 18805126 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18813023 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 18818547 . G T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 18818605 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18818643 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18819139 . G T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 18821663 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18821740 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 18821747 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 18825849 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 18825945 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18826487 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 18832447 . T C 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 18832756 . A T 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 18832981 . C A 59.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.015;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.64;ReadPosRankSum=0.992;SOR=0.959 GT:AD:DP:GQ:PL 0/1:6,3:9:88:88,0,223 chr1 18833002 . C G 197.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.72;ReadPosRankSum=0.319;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,6:8:66:226,0,66 chr1 18833163 . A G 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr1 18833666 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18838033 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 18839800 . G A 7619.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.850;ClippingRankSum=0.000;DP=503;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.24;ReadPosRankSum=0.537;SOR=0.704 GT:AD:DP:GQ:PL 0/1:229,271:500:99:7648,0,6096 chr1 18849141 . C T 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 18849760 . C T 365.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.635;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=2.251;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.55;ReadPosRankSum=-0.126;SOR=0.283 GT:AD:DP:GQ:PL 0/1:14,13:27:99:394,0,453 chr1 18850037 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 18850038 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 18859635 . G C 10120.77 PASS AC=2;AF=1.00;AN=2;DP=317;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.93;SOR=0.792 GT:AD:DP:GQ:PL 1/1:0,317:317:99:10149,951,0 chr1 18859752 . G A 2544.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.831;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.29;ReadPosRankSum=0.303;SOR=0.688 GT:AD:DP:GQ:PL 0/1:112,95:207:99:2573,0,3051 chr1 18859766 . C T 6085.77 PASS AC=2;AF=1.00;AN=2;DP=181;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.81;SOR=1.759 GT:AD:DP:GQ:PL 1/1:0,180:180:99:6114,540,0 chr1 18859826 . G C 3832.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.62;SOR=2.419 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3861,310,0 chr1 18872727 . C T 515.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.378;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.84;ReadPosRankSum=0.935;SOR=1.270 GT:AD:DP:GQ:PL 0/1:10,16:26:99:544,0,339 chr1 18872979 . T A 3596.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.212;ClippingRankSum=0.000;DP=286;ExcessHet=3.0103;FS=1.399;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.58;ReadPosRankSum=0.185;SOR=0.780 GT:AD:DP:GQ:PL 0/1:144,142:286:99:3625,0,3690 chr1 18873229 . G A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.99;ReadPosRankSum=-2.333;SOR=0.120 GT:AD:DP:GQ:PL 0/1:13,4:17:99:113,0,488 chr1 18874414 . G C 2043.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.206;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=1.359;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.259;SOR=0.536 GT:AD:DP:GQ:PL 0/1:87,74:161:99:2072,0,2501 chr1 18874690 . G C 589.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.722;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.243;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.83;ReadPosRankSum=-0.485;SOR=0.421 GT:AD:DP:GQ:PL 0/1:36,24:60:99:618,0,1073 chr1 18874789 . G A 160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.08;ReadPosRankSum=1.133;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:189,0,137 chr1 18875462 . A G 3657.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.212;ClippingRankSum=0.000;DP=340;ExcessHet=3.0103;FS=0.399;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.79;ReadPosRankSum=1.886;SOR=0.659 GT:AD:DP:GQ:PL 0/1:198,141:339:99:3686,0,5183 chr1 18876013 . T C 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.807;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=3.282;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=0.305;SOR=2.303 GT:AD:DP:GQ:PL 0/1:7,5:12:99:173,0,188 chr1 18876276 . T C 4767.77 PASS AC=2;AF=1.00;AN=2;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.11;SOR=1.079 GT:AD:DP:GQ:PL 1/1:0,144:144:99:4796,432,0 chr1 18876402 . G A 1466.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.011;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=0.691;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.83;ReadPosRankSum=0.100;SOR=0.773 GT:AD:DP:GQ:PL 0/1:66,58:124:99:1495,0,1759 chr1 18876423 . T C 1799.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.997;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=5.458;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.31;ReadPosRankSum=-0.131;SOR=1.284 GT:AD:DP:GQ:PL 0/1:58,46:104:99:1828,0,3250 chr1 18876432 . T C 1769.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.745;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=5.532;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.52;ReadPosRankSum=-0.577;SOR=1.289 GT:AD:DP:GQ:PL 0/1:55,46:101:99:1798,0,3155 chr1 18877503 . C G 3951.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.438;ClippingRankSum=0.000;DP=408;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.71;ReadPosRankSum=-2.237;SOR=0.682 GT:AD:DP:GQ:PL 0/1:213,156:369:99:3980,0,5957 chr1 18877660 . G A 3282.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.60;QD=29.41;SOR=2.804 GT:AD:DP:GQ:PL 1/1:0,77:77:99:3311,234,0 chr1 18877679 . A G 2984.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.98;SOR=3.393 GT:AD:DP:GQ:PL 1/1:0,68:68:99:3013,208,0 chr1 18882450 . A G 1584.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.25;SOR=3.109 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1613,129,0 chr1 18883049 . A G 3291.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.29;SOR=1.659 GT:AD:DP:GQ:PL 1/1:0,96:96:99:3320,288,0 chr1 18889134 . T C 439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.290;SOR=0.770 GT:AD:DP:GQ:PL 0/1:12,13:25:99:468,0,426 chr1 18889340 . T C 10037.77 PASS AC=2;AF=1.00;AN=2;DP=318;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.57;SOR=1.197 GT:AD:DP:GQ:PL 1/1:0,318:318:99:10066,952,0 chr1 18904983 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 18917095 . A G 2563.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.538;ClippingRankSum=0.000;DP=212;ExcessHet=3.0103;FS=3.171;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.09;ReadPosRankSum=0.639;SOR=0.507 GT:AD:DP:GQ:PL 0/1:109,103:212:99:2592,0,2799 chr1 18918184 . C T 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=0.175;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,179 chr1 18929663 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 18934299 . C T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 18950432 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.59;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 18950441 . T A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.80;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 18955538 . T C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.842;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 18956450 . G A 454.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.337;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=2.031;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.19;ReadPosRankSum=-0.876;SOR=0.352 GT:AD:DP:GQ:PL 0/1:10,15:25:99:483,0,308 chr1 18956487 . A C 686.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.35;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,18:18:54:715,54,0 chr1 18959158 . G T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 18978262 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 19029894 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 19030260 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 19030310 . A G 72.90 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=-0.524;SOR=1.447 GT:AD:DP:GQ:PL 0/1:1,4:5:15:101,0,15 chr1 19048300 . T C 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 19058344 . G C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 19059498 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 19064138 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 19077373 . C G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.126;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 19081886 . T C 443.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.610;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.32;ReadPosRankSum=0.376;SOR=0.527 GT:AD:DP:GQ:PL 0/1:15,16:31:99:472,0,463 chr1 19084635 . A G 3625.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.552;ClippingRankSum=0.000;DP=293;ExcessHet=3.0103;FS=0.426;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=0.590;SOR=0.640 GT:AD:DP:GQ:PL 0/1:146,146:292:99:3654,0,3849 chr1 19084950 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 19085970 . C T 1071.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.092;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.29;ReadPosRankSum=0.206;SOR=0.836 GT:AD:DP:GQ:PL 0/1:29,33:62:99:1100,0,960 chr1 19086767 . T A 2673.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.589;ClippingRankSum=0.000;DP=250;ExcessHet=3.0103;FS=1.537;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.74;ReadPosRankSum=-0.484;SOR=0.591 GT:AD:DP:GQ:PL 0/1:140,109:249:99:2702,0,3919 chr1 19086926 . T G 1480.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.232;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=6.328;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.04;ReadPosRankSum=1.101;SOR=0.316 GT:AD:DP:GQ:PL 0/1:64,59:123:99:1509,0,1983 chr1 19088810 . C T 753.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.088;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.22;ReadPosRankSum=-0.049;SOR=0.766 GT:AD:DP:GQ:PL 0/1:30,27:57:99:782,0,911 chr1 19093898 . G A 1213.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.284;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.11;ReadPosRankSum=0.751;SOR=0.693 GT:AD:DP:GQ:PL 0/1:46,40:86:99:1242,0,1487 chr1 19095352 . G T 277.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.115;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.34;ReadPosRankSum=-0.618;SOR=0.569 GT:AD:DP:GQ:PL 0/1:9,8:17:99:306,0,587 chr1 19095362 . A G 315.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.593;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.077;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.57;ReadPosRankSum=-0.659;SOR=0.235 GT:AD:DP:GQ:PL 0/1:8,9:17:99:344,0,584 chr1 19096913 . G T 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=0.000;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr1 19097071 . T C 82.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.35;ReadPosRankSum=-0.816;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:111,0,143 chr1 19099705 . G A 590.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.025;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.413;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-0.601;SOR=0.377 GT:AD:DP:GQ:PL 0/1:22,23:45:99:619,0,638 chr1 19105367 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.82;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 19106955 . A G 889.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.099;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.970;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.69;ReadPosRankSum=1.745;SOR=0.836 GT:AD:DP:GQ:PL 0/1:31,34:65:99:918,0,822 chr1 19107118 . T A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 19110691 . G T 1575.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.010;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=7.162;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.73;ReadPosRankSum=1.727;SOR=1.478 GT:AD:DP:GQ:PL 0/1:54,53:107:99:1604,0,1554 chr1 19113613 . A G 1437.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.104;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=2.721;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.32;ReadPosRankSum=-2.713;SOR=1.284 GT:AD:DP:GQ:PL 0/1:39,44:83:99:1466,0,1204 chr1 19114718 . A G 736.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.023;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.68;ReadPosRankSum=0.501;SOR=0.578 GT:AD:DP:GQ:PL 0/1:25,22:47:99:765,0,903 chr1 19115233 . T A 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.323;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=5.315;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.22;ReadPosRankSum=1.334;SOR=0.086 GT:AD:DP:GQ:PL 0/1:8,9:17:99:253,0,254 chr1 19119894 . T C 54.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.48;ReadPosRankSum=0.728;SOR=0.836 GT:AD:DP:GQ:PL 0/1:7,3:10:83:83,0,255 chr1 19120093 . C T 1114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.323;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.39;ReadPosRankSum=0.542;SOR=0.567 GT:AD:DP:GQ:PL 0/1:30,38:68:99:1143,0,947 chr1 19121004 . T C 318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.290;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.26;ReadPosRankSum=0.735;SOR=0.430 GT:AD:DP:GQ:PL 0/1:15,11:26:99:347,0,514 chr1 19121349 . C G 1728.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.858;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.01;ReadPosRankSum=0.287;SOR=0.675 GT:AD:DP:GQ:PL 0/1:77,67:144:99:1757,0,2189 chr1 19121832 . C T 806.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.846;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=-1.220;SOR=0.580 GT:AD:DP:GQ:PL 0/1:39,29:68:99:835,0,1034 chr1 19122114 . C G 339.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.163;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=3.139;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.88;ReadPosRankSum=0.301;SOR=0.129 GT:AD:DP:GQ:PL 0/1:8,11:19:99:368,0,277 chr1 19144168 . T C 1281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.291;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=1.785;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.40;ReadPosRankSum=0.197;SOR=0.468 GT:AD:DP:GQ:PL 0/1:43,46:89:99:1310,0,1183 chr1 19144255 . G C 577.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.509;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=4.183;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.56;ReadPosRankSum=-0.165;SOR=0.284 GT:AD:DP:GQ:PL 0/1:27,23:50:99:606,0,737 chr1 19160345 . T C 689.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.102;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.16;ReadPosRankSum=-1.006;SOR=0.693 GT:AD:DP:GQ:PL 0/1:13,23:36:99:718,0,352 chr1 19162345 . C A 569.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.965;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=3.632;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.99;ReadPosRankSum=0.945;SOR=2.160 GT:AD:DP:GQ:PL 0/1:13,17:30:99:598,0,406 chr1 19165363 . T C 1010.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.063;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=0.782;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.21;ReadPosRankSum=0.489;SOR=0.818 GT:AD:DP:GQ:PL 0/1:61,38:99:99:1039,0,1736 chr1 19173066 . T C 2265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.813;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=1.266;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.52;ReadPosRankSum=-0.411;SOR=0.826 GT:AD:DP:GQ:PL 0/1:74,82:156:99:2294,0,2150 chr1 19173341 . G C 1460.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.863;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=3.554;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.16;ReadPosRankSum=2.042;SOR=0.406 GT:AD:DP:GQ:PL 0/1:60,51:111:99:1489,0,1729 chr1 19173834 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 19174235 . G A 1435.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.926;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.32;ReadPosRankSum=0.650;SOR=0.575 GT:AD:DP:GQ:PL 0/1:39,49:88:99:1464,0,1182 chr1 19183900 . A G 1886.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.968;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=0.674;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.22;ReadPosRankSum=-0.639;SOR=0.595 GT:AD:DP:GQ:PL 0/1:57,67:124:99:1915,0,1475 chr1 19199091 . T C 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=0.842;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,137 chr1 19227605 . T G 539.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.483;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.87;ReadPosRankSum=0.666;SOR=1.708 GT:AD:DP:GQ:PL 0/1:16,16:32:99:568,0,536 chr1 19231219 . G C 788.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.088;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.84;ReadPosRankSum=-0.672;SOR=0.741 GT:AD:DP:GQ:PL 0/1:30,27:57:99:817,0,907 chr1 19240387 . C T 1726.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.627;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=0.633;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.51;ReadPosRankSum=-0.780;SOR=0.780 GT:AD:DP:GQ:PL 0/1:73,65:138:99:1755,0,1851 chr1 19256906 . A G 3833.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.77;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3862,351,0 chr1 19268643 . C T 2335.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.833;ClippingRankSum=0.000;DP=174;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.50;ReadPosRankSum=0.081;SOR=0.723 GT:AD:DP:GQ:PL 0/1:83,90:173:99:2364,0,2061 chr1 19269398 . G A 1366.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.387;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=9.400;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.11;ReadPosRankSum=1.109;SOR=1.560 GT:AD:DP:GQ:PL 0/1:70,53:123:99:1395,0,1834 chr1 19269630 . C T 868.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.650;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=2.070;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.59;ReadPosRankSum=-1.525;SOR=0.970 GT:AD:DP:GQ:PL 0/1:33,36:69:99:897,0,859 chr1 19269662 . G T 1097.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.369;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.33;ReadPosRankSum=0.926;SOR=0.633 GT:AD:DP:GQ:PL 0/1:43,46:89:99:1126,0,1120 chr1 19270347 . G A 1007.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.329;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.07;MQRankSum=1.173;QD=17.68;ReadPosRankSum=-0.250;SOR=0.804 GT:AD:DP:GQ:PL 0/1:27,30:57:99:1036,0,934 chr1 19282760 . T C 6067.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.221;ClippingRankSum=0.000;DP=471;ExcessHet=3.0103;FS=0.520;MLEAC=1;MLEAF=0.500;MQ=59.44;MQRankSum=-2.955;QD=12.91;ReadPosRankSum=0.484;SOR=0.714 GT:AD:DP:GQ:PL 0/1:237,233:470:99:6096,0,6272 chr1 19283028 . G A 850.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.841;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.84;MQRankSum=-0.929;QD=11.65;ReadPosRankSum=1.578;SOR=0.768 GT:AD:DP:GQ:PL 0/1:41,32:73:99:879,0,1112 chr1 19284733 . G A 2510.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.762;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=3.026;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.56;ReadPosRankSum=-0.546;SOR=0.960 GT:AD:DP:GQ:PL 0/1:75,68:143:99:2539,0,4253 chr1 19284747 . T C 2425.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.592;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=6.641;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.24;ReadPosRankSum=0.350;SOR=1.237 GT:AD:DP:GQ:PL 0/1:70,63:133:99:2454,0,4087 chr1 19284916 . C G 958.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.24;SOR=1.382 GT:AD:DP:GQ:PL 1/1:0,28:28:84:987,84,0 chr1 19285415 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 19285755 . G A 574.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.648;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.68;MQRankSum=1.013;QD=16.90;ReadPosRankSum=-1.050;SOR=0.247 GT:AD:DP:GQ:PL 0/1:16,18:34:99:603,0,557 chr1 19308883 . C T 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-0.842;SOR=1.492 GT:AD:DP:GQ:PL 0/1:3,4:7:70:146,0,70 chr1 19311815 . A G 176.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.409;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.69;ReadPosRankSum=-0.087;SOR=0.892 GT:AD:DP:GQ:PL 0/1:14,9:23:99:205,0,377 chr1 19316179 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 19324488 . C T 584.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.926;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.26;ReadPosRankSum=0.234;SOR=1.022 GT:AD:DP:GQ:PL 0/1:21,20:41:99:613,0,589 chr1 19324608 . A G 2290.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.613;ClippingRankSum=0.000;DP=165;ExcessHet=3.0103;FS=1.282;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=0.817;SOR=0.553 GT:AD:DP:GQ:PL 0/1:81,84:165:99:2319,0,2078 chr1 19324783 . G A 1575.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.114;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.986;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.13;ReadPosRankSum=0.399;SOR=0.913 GT:AD:DP:GQ:PL 0/1:40,52:92:99:1604,0,1090 chr1 19324806 . T C 1072.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.019;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.33;ReadPosRankSum=0.370;SOR=0.760 GT:AD:DP:GQ:PL 0/1:34,36:70:99:1101,0,958 chr1 19324836 . C T 807.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.212;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.56;ReadPosRankSum=-2.339;SOR=0.458 GT:AD:DP:GQ:PL 0/1:21,25:46:99:836,0,693 chr1 19324891 . G T 90.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.951;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.67;ReadPosRankSum=0.685;SOR=0.527 GT:AD:DP:GQ:PL 0/1:12,4:16:99:119,0,413 chr1 19325189 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,79 chr1 19325196 . G C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:57:81,0,57 chr1 19325569 . G A 3392.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.062;ClippingRankSum=0.000;DP=247;ExcessHet=3.0103;FS=4.331;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.90;ReadPosRankSum=1.235;SOR=0.978 GT:AD:DP:GQ:PL 0/1:119,125:244:99:3421,0,3300 chr1 19325638 . T G 272.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.360;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=14.396;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.37;ReadPosRankSum=1.551;SOR=0.876 GT:AD:DP:GQ:PL 0/1:90,25:115:99:301,0,3584 chr1 19326148 . A C 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=0.825;SOR=0.293 GT:AD:DP:GQ:PL 0/1:5,7:12:99:256,0,168 chr1 19326190 . G C 268.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.394;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=-0.244;SOR=0.538 GT:AD:DP:GQ:PL 0/1:9,11:20:99:297,0,248 chr1 19326762 . A G 971.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.617;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.00;ReadPosRankSum=-0.843;SOR=0.271 GT:AD:DP:GQ:PL 0/1:25,29:54:99:1000,0,876 chr1 19326815 . G A 289.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.133;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.05;ReadPosRankSum=0.273;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,10:17:99:318,0,242 chr1 19342623 . A G 399.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.039;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.81;ReadPosRankSum=0.441;SOR=0.622 GT:AD:DP:GQ:PL 0/1:14,13:27:99:428,0,451 chr1 19349067 . C T 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=0.566;SOR=0.086 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,146 chr1 19382083 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 19382124 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 19384943 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 19413680 . A T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 19466411 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 19491383 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 19541965 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 19542126 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 19542156 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 19546640 . A G 125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.97;ReadPosRankSum=1.068;SOR=0.636 GT:AD:DP:GQ:PL 0/1:2,5:7:62:154,0,62 chr1 19564940 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 19596819 . T A 674.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.463;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.097;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.50;ReadPosRankSum=-0.208;SOR=0.984 GT:AD:DP:GQ:PL 0/1:26,28:54:99:703,0,618 chr1 19643117 . A G 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.80;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr1 19651974 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 19652402 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 19654958 . A G 311.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.98;ReadPosRankSum=0.943;SOR=1.981 GT:AD:DP:GQ:PL 0/1:3,9:12:89:340,0,89 chr1 19655298 . A G 2827.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.838;ClippingRankSum=0.000;DP=244;ExcessHet=3.0103;FS=0.991;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=-0.675;SOR=0.778 GT:AD:DP:GQ:PL 0/1:136,108:244:99:2856,0,3686 chr1 19665573 . T C 328.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.89;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:33:357,33,0 chr1 19672508 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 19694500 . A G 6579.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.315;ClippingRankSum=0.000;DP=326;ExcessHet=3.0103;FS=4.256;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.18;ReadPosRankSum=-0.783;SOR=0.734 GT:AD:DP:GQ:PL 0/1:158,168:326:99:6608,0,8303 chr1 19694501 . C T 6579.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.325;ClippingRankSum=0.000;DP=326;ExcessHet=3.0103;FS=2.957;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.18;ReadPosRankSum=-0.248;SOR=0.777 GT:AD:DP:GQ:PL 0/1:160,166:326:99:6608,0,8303 chr1 19700408 . C G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 19700469 . C T 128.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.46;ReadPosRankSum=-0.674;SOR=0.941 GT:AD:DP:GQ:PL 0/1:1,5:6:24:157,0,24 chr1 19700556 . A C 606.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.794;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=5.994;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.48;ReadPosRankSum=-3.393;SOR=2.494 GT:AD:DP:GQ:PL 0/1:26,19:45:99:635,0,878 chr1 19700911 . G A 1642.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.762;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=1.674;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.80;ReadPosRankSum=-0.673;SOR=0.930 GT:AD:DP:GQ:PL 0/1:62,57:119:99:1671,0,1789 chr1 19700930 . T G 1319.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.280;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.884;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=0.284;SOR=0.810 GT:AD:DP:GQ:PL 0/1:53,45:98:99:1348,0,1381 chr1 19702119 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 19702120 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 19722592 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 19739640 . T C 856.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.32;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,22:22:66:885,66,0 chr1 19746218 . C T 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-1.465;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,154 chr1 19746653 . G A 590.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.265;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=3.445;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.07;ReadPosRankSum=0.484;SOR=0.146 GT:AD:DP:GQ:PL 0/1:23,19:42:99:619,0,822 chr1 19763373 . G C 180.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.14;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:209,18,0 chr1 19763386 . C G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.000;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 19763412 . A G 160.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.81;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:189,18,0 chr1 19763452 . G A 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.645;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.126;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:110,0,34 chr1 19766847 . T C 41.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:69,6,0 chr1 19766850 . C T 41.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.73;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:69,6,0 chr1 19770373 . G T 338.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.93;ReadPosRankSum=-1.326;SOR=1.061 GT:AD:DP:GQ:PL 0/1:7,10:17:99:367,0,241 chr1 19770613 . G A 2885.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.002;ClippingRankSum=0.000;DP=195;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.88;ReadPosRankSum=-0.085;SOR=0.676 GT:AD:DP:GQ:PL 0/1:87,107:194:99:2914,0,2220 chr1 19770792 . T G 1307.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.570;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=4.260;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.21;ReadPosRankSum=0.370;SOR=0.370 GT:AD:DP:GQ:PL 0/1:48,51:99:99:1336,0,1442 chr1 19770877 . T C 1264.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.77;SOR=2.964 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1293,105,0 chr1 19771115 . C A 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.18;ReadPosRankSum=-0.689;SOR=1.112 GT:AD:DP:GQ:PL 0/1:6,9:15:99:331,0,205 chr1 19771118 . G A 656.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.21;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:685,48,0 chr1 19771329 . G A 3528.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.223;ClippingRankSum=0.000;DP=252;ExcessHet=3.0103;FS=2.792;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.00;ReadPosRankSum=0.514;SOR=0.527 GT:AD:DP:GQ:PL 0/1:112,140:252:99:3557,0,2955 chr1 19771448 . G T 4835.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.15;SOR=2.169 GT:AD:DP:GQ:PL 1/1:0,138:138:99:4864,414,0 chr1 19771573 . A G 417.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.473;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.41;ReadPosRankSum=0.000;SOR=0.818 GT:AD:DP:GQ:PL 0/1:17,12:29:99:446,0,720 chr1 19771586 . C A 349.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.507;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.57;ReadPosRankSum=-0.798;SOR=0.846 GT:AD:DP:GQ:PL 0/1:14,10:24:99:378,0,610 chr1 19771649 . A G 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,115 chr1 19778811 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 19780525 . G A 3152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.282;ClippingRankSum=0.000;DP=278;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.34;ReadPosRankSum=0.908;SOR=0.690 GT:AD:DP:GQ:PL 0/1:147,131:278:99:3181,0,3728 chr1 19814067 . A C 307.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.161;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=-0.509;SOR=0.984 GT:AD:DP:GQ:PL 0/1:17,10:27:99:336,0,591 chr1 19814480 . G T 2644.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.260;ClippingRankSum=0.000;DP=205;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.90;ReadPosRankSum=0.409;SOR=0.675 GT:AD:DP:GQ:PL 0/1:103,102:205:99:2673,0,2856 chr1 19890367 . G A 794.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.058;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=2.548;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-0.740;SOR=0.327 GT:AD:DP:GQ:PL 0/1:32,32:64:99:823,0,974 chr1 19923017 . G A 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.19;ReadPosRankSum=-0.674;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:69,0,30 chr1 19923843 . A G 421.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.58;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:450,30,0 chr1 19923846 . A G 421.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.82;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:450,30,0 chr1 19924032 . G A 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr1 19978572 . C T 2946.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.111;ClippingRankSum=0.000;DP=174;ExcessHet=3.0103;FS=15.079;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.94;ReadPosRankSum=-0.302;SOR=1.290 GT:AD:DP:GQ:PL 0/1:76,98:174:99:2975,0,2075 chr1 20068908 . C A 2569.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=2.599 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2598,224,0 chr1 20069375 . G A 544.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.63;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:573,42,0 chr1 20090385 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 20109281 . A T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 20110398 . G C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 20115561 . T C 5208.77 PASS AC=2;AF=1.00;AN=2;DP=164;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=0.995 GT:AD:DP:GQ:PL 1/1:0,164:164:99:5237,492,0 chr1 20116094 . T C 890.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.273;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.27;ReadPosRankSum=-0.949;SOR=0.560 GT:AD:DP:GQ:PL 0/1:14,26:40:99:919,0,464 chr1 20116198 . C T 1713.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.189;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=1.464;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.82;ReadPosRankSum=-0.491;SOR=0.882 GT:AD:DP:GQ:PL 0/1:83,62:145:99:1742,0,2334 chr1 20116660 . G A 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.30;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 20144799 . G A 1170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.152;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.45;ReadPosRankSum=-0.121;SOR=0.527 GT:AD:DP:GQ:PL 0/1:44,37:81:99:1199,0,1464 chr1 20164025 . T C 3118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.133;ClippingRankSum=0.000;DP=289;ExcessHet=3.0103;FS=5.464;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.87;ReadPosRankSum=0.109;SOR=0.583 GT:AD:DP:GQ:PL 0/1:161,126:287:99:3147,0,4286 chr1 20174949 . T C 1327.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.675;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=0.716;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=-0.473;SOR=0.596 GT:AD:DP:GQ:PL 0/1:59,53:112:99:1356,0,1490 chr1 20177217 . G A 842.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.146;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=5.461;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.07;ReadPosRankSum=-1.085;SOR=0.111 GT:AD:DP:GQ:PL 0/1:13,27:40:99:871,0,423 chr1 20282621 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 20290797 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 20291178 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 20291737 . G C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 20293136 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 20294380 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 20294859 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 20306787 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 20310550 . C T 645.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.187;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=3.043;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.92;ReadPosRankSum=0.750;SOR=0.256 GT:AD:DP:GQ:PL 0/1:25,25:50:99:674,0,777 chr1 20310881 . T C 874.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.64;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,26:26:78:903,78,0 chr1 20317451 . G C 901.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.698;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=1.952;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=-0.187;SOR=1.154 GT:AD:DP:GQ:PL 0/1:40,28:68:99:930,0,1379 chr1 20318259 . G A 1212.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.14;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1241,90,0 chr1 20319722 . T G 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=-0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr1 20319881 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 20321678 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 20321886 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 20323321 . T C 3018.77 PASS AC=2;AF=1.00;AN=2;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.70;SOR=1.836 GT:AD:DP:GQ:PL 1/1:0,87:87:99:3047,261,0 chr1 20327641 . C T 31.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0 chr1 20330331 . A G 2515.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.188;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.63;ReadPosRankSum=0.060;SOR=0.693 GT:AD:DP:GQ:PL 0/1:73,88:161:99:2544,0,2039 chr1 20330859 . T C 10066.77 PASS AC=2;AF=1.00;AN=2;DP=321;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.36;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,321:321:99:10095,962,0 chr1 20333191 . A G 293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.32;ReadPosRankSum=-0.886;SOR=0.693 GT:AD:DP:GQ:PL 0/1:9,9:18:99:322,0,318 chr1 20336445 . A G 3101.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.662;ClippingRankSum=0.000;DP=231;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=1.394;SOR=0.675 GT:AD:DP:GQ:PL 0/1:115,116:231:99:3130,0,3073 chr1 20337332 . A T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 20337568 . A G 746.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.172;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.66;ReadPosRankSum=1.316;SOR=0.841 GT:AD:DP:GQ:PL 0/1:35,24:59:99:775,0,1062 chr1 20338163 . T A 442.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.171;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.45;ReadPosRankSum=0.650;SOR=0.859 GT:AD:DP:GQ:PL 0/1:11,13:24:99:471,0,375 chr1 20345340 . C A 4386.77 PASS AC=2;AF=1.00;AN=2;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.74;SOR=1.721 GT:AD:DP:GQ:PL 1/1:0,130:130:99:4415,390,0 chr1 20345468 . G A 7988.77 PASS AC=2;AF=1.00;AN=2;DP=258;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.96;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,258:258:99:8017,773,0 chr1 20345608 . C T 4442.77 PASS AC=2;AF=1.00;AN=2;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.67;SOR=1.716 GT:AD:DP:GQ:PL 1/1:0,136:136:99:4471,407,0 chr1 20350439 . T A 1506.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.25;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1535,114,0 chr1 20350704 . G C 335.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.711;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=7.375;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.65;ReadPosRankSum=0.900;SOR=3.145 GT:AD:DP:GQ:PL 0/1:8,10:18:99:364,0,246 chr1 20351040 . C T 1171.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.955;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=5.798;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.29;ReadPosRankSum=-1.769;SOR=1.518 GT:AD:DP:GQ:PL 0/1:43,39:82:99:1200,0,1277 chr1 20352058 . A G 3484.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.584;ClippingRankSum=0.000;DP=267;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.05;ReadPosRankSum=-0.609;SOR=0.676 GT:AD:DP:GQ:PL 0/1:131,136:267:99:3513,0,3210 chr1 20354267 . A G 4329.77 PASS AC=2;AF=1.00;AN=2;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.31;SOR=1.665 GT:AD:DP:GQ:PL 1/1:0,130:130:99:4358,390,0 chr1 20400246 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 20408959 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 20408972 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 20409859 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 20483283 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.55;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 20483290 . T G 152.03 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.08;QD=25.19;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:12:180,12,0 chr1 20483301 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.32;QD=30.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 20483309 . C T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.32;QD=28.86;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 20483313 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.32;QD=34.84;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 20498414 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 20503067 . G A 1394.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.70;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1423,132,0 chr1 20508117 . C A 251.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.712;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=-0.061;SOR=1.445 GT:AD:DP:GQ:PL 0/1:10,8:18:99:280,0,297 chr1 20520243 . G A 825.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.41;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,24:24:72:854,72,0 chr1 20533761 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 20562069 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 20562115 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 20562128 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 20576669 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 20576688 . G C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.89;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 20576699 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.56;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 20576702 . G T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.55;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 20576714 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 20577019 . T G 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 20577041 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 20577052 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 20602146 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 20605281 . A G 279.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:27:308,27,0 chr1 20605335 . A T 179.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.86;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:208,15,0 chr1 20613765 . T A 5982.77 PASS AC=2;AF=1.00;AN=2;DP=178;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.80;SOR=1.369 GT:AD:DP:GQ:PL 1/1:0,177:177:99:6011,532,0 chr1 20633737 . C T 723.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=1.493 GT:AD:DP:GQ:PL 1/1:0,18:18:54:752,54,0 chr1 20637835 . A G 1521.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.08;SOR=3.365 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1550,126,0 chr1 20638882 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 20640387 . C T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.44;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 20645418 . G C 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 20645555 . G A 1653.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.45;SOR=1.708 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1682,144,0 chr1 20645847 . G A 751.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.39;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,19:19:57:780,57,0 chr1 20648309 . A G 2608.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2637,249,0 chr1 20650096 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 20650266 . C T 1844.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.54;SOR=2.179 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1873,165,0 chr1 20650728 . A T 3013.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.25;SOR=2.967 GT:AD:DP:GQ:PL 1/1:0,88:88:99:3042,263,0 chr1 20650768 . G A 769.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.933;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=6.256;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.38;ReadPosRankSum=-1.326;SOR=0.061 GT:AD:DP:GQ:PL 0/1:22,25:47:99:798,0,766 chr1 20650872 . C G 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr1 20650956 . G T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 20652339 . T C 4401.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.74;SOR=2.207 GT:AD:DP:GQ:PL 1/1:0,121:121:99:4430,363,0 chr1 20653325 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 20655313 . G A 841.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.51;SOR=4.892 GT:AD:DP:GQ:PL 1/1:0,23:23:69:870,69,0 chr1 20661380 . G C 5342.77 PASS AC=2;AF=1.00;AN=2;DP=158;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.81;SOR=1.451 GT:AD:DP:GQ:PL 1/1:0,158:158:99:5371,475,0 chr1 20664780 . G A 491.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.65;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:42:520,42,0 chr1 20666326 . G C 7506.77 PASS AC=2;AF=1.00;AN=2;DP=221;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=1.789 GT:AD:DP:GQ:PL 1/1:0,221:221:99:7535,664,0 chr1 20666440 . G C 1589.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.68;SOR=4.125 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1618,126,0 chr1 20670847 . G T 316.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.80;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:33:345,33,0 chr1 20672356 . C T 394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.431;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=1.999;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.45;ReadPosRankSum=-1.334;SOR=0.352 GT:AD:DP:GQ:PL 0/1:8,16:24:99:423,0,228 chr1 20683093 . C T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 20683118 . T A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-1.036;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr1 20685601 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 20689994 . C T 226.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.735;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.350;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.34;ReadPosRankSum=0.933;SOR=0.148 GT:AD:DP:GQ:PL 0/1:10,10:20:99:255,0,324 chr1 20690413 . G T 585.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.342;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=4.499;MLEAC=1;MLEAF=0.500;MQ=58.54;MQRankSum=-0.299;QD=16.27;ReadPosRankSum=-0.908;SOR=0.166 GT:AD:DP:GQ:PL 0/1:16,20:36:99:614,0,545 chr1 20698250 . G A 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.242;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=-0.566;SOR=0.148 GT:AD:DP:GQ:PL 0/1:4,4:8:99:109,0,143 chr1 20698408 . C T 1917.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.06;SOR=1.382 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1946,174,0 chr1 20698646 . T C 480.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.660;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.831;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.04;ReadPosRankSum=0.066;SOR=1.863 GT:AD:DP:GQ:PL 0/1:6,14:20:99:509,0,156 chr1 20704409 . G T 1706.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.408;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=2.940;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.34;ReadPosRankSum=-0.821;SOR=1.026 GT:AD:DP:GQ:PL 0/1:64,55:119:99:1735,0,1865 chr1 20713586 . C A 2073.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.677;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.20;ReadPosRankSum=-0.139;SOR=0.719 GT:AD:DP:GQ:PL 0/1:92,78:170:99:2102,0,2344 chr1 20715807 . C G 475.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.072;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.87;ReadPosRankSum=1.656;SOR=0.693 GT:AD:DP:GQ:PL 0/1:16,16:32:99:504,0,572 chr1 20717297 . T C 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.000;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 20717420 . T C 710.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.766;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.53;ReadPosRankSum=1.928;SOR=0.779 GT:AD:DP:GQ:PL 0/1:19,24:43:99:739,0,527 chr1 20717433 . T C 806.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.449;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.81;ReadPosRankSum=1.074;SOR=0.841 GT:AD:DP:GQ:PL 0/1:21,27:48:99:835,0,597 chr1 20717668 . A G 774.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.354;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=4.187;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.07;ReadPosRankSum=-0.415;SOR=1.185 GT:AD:DP:GQ:PL 0/1:65,31:96:99:803,0,1697 chr1 20717726 . A C 2197.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.96;SOR=2.722 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2226,180,0 chr1 20724465 . C T 7099.77 PASS AC=2;AF=1.00;AN=2;DP=203;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.97;SOR=1.356 GT:AD:DP:GQ:PL 1/1:0,203:203:99:7128,609,0 chr1 20728233 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 20730518 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 20756942 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 20757377 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 20761544 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 20765368 . G T 2073.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.080;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=1.922;SOR=0.660 GT:AD:DP:GQ:PL 0/1:83,78:161:99:2102,0,2267 chr1 20771234 . G A 292.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.26;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:9,9:18:99:321,0,290 chr1 20773353 . A G 347.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.395;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=0.466;SOR=0.368 GT:AD:DP:GQ:PL 0/1:18,12:30:99:376,0,627 chr1 20782518 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 20817240 . T A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.16;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 20817281 . A T 457.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.061;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.09;ReadPosRankSum=-0.502;SOR=0.627 GT:AD:DP:GQ:PL 0/1:4,15:19:99:486,0,123 chr1 20839651 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 20840911 . A G 3276.77 PASS AC=2;AF=1.00;AN=2;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.34;SOR=1.077 GT:AD:DP:GQ:PL 1/1:0,108:108:99:3305,324,0 chr1 20849362 . C A 976.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.30;SOR=5.058 GT:AD:DP:GQ:PL 1/1:0,25:25:75:1005,75,0 chr1 20853476 . G A 2011.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.10;SOR=1.903 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2040,177,0 chr1 20853688 . C T 1119.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.254;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=3.668;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.00;ReadPosRankSum=-0.586;SOR=0.307 GT:AD:DP:GQ:PL 0/1:30,40:70:99:1148,0,822 chr1 20853757 . G A 511.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.725;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=1.983;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.28;ReadPosRankSum=-0.159;SOR=0.252 GT:AD:DP:GQ:PL 0/1:7,21:28:99:540,0,175 chr1 20857938 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 20862210 . A T 875.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.584;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.156;SOR=0.706 GT:AD:DP:GQ:PL 0/1:37,32:69:99:913,0,1062 chr1 20862378 . C A 517.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.561;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.49;ReadPosRankSum=-1.888;SOR=1.270 GT:AD:DP:GQ:PL 0/1:11,17:28:99:546,0,341 chr1 20864923 . T G 525.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.624;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.22;ReadPosRankSum=1.189;SOR=0.481 GT:AD:DP:GQ:PL 0/1:10,16:26:99:554,0,267 chr1 20864937 . A G 538.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.552;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.95;ReadPosRankSum=-0.327;SOR=0.551 GT:AD:DP:GQ:PL 0/1:9,18:27:99:567,0,261 chr1 20879650 . T G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.253;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 20892557 . C T 466.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.404;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=1.288;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.53;ReadPosRankSum=0.151;SOR=0.943 GT:AD:DP:GQ:PL 0/1:30,19:49:99:495,0,844 chr1 20892879 . G A 462.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.092;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=2.963;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.29;ReadPosRankSum=-0.069;SOR=0.323 GT:AD:DP:GQ:PL 0/1:21,20:41:99:491,0,584 chr1 20893882 . T G 304.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.496;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.85;ReadPosRankSum=0.336;SOR=0.941 GT:AD:DP:GQ:PL 0/1:10,12:22:99:333,0,249 chr1 20893998 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 20969371 . C T 576.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.716;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=6.773;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.30;ReadPosRankSum=0.663;SOR=1.765 GT:AD:DP:GQ:PL 0/1:34,22:56:99:605,0,890 chr1 20972870 . C A 311.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.98;ReadPosRankSum=-0.524;SOR=1.981 GT:AD:DP:GQ:PL 0/1:3,9:12:89:340,0,89 chr1 20987961 . T C 41.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.69;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:69,6,0 chr1 20987962 . G A 41.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:69,6,0 chr1 20998867 . C A 268.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.411;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.92;ReadPosRankSum=0.202;SOR=0.582 GT:AD:DP:GQ:PL 0/1:6,9:15:99:297,0,171 chr1 21001144 . C T 3698.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.63;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3727,330,0 chr1 21017357 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 21017367 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 21029348 . C G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 21050821 . C T 2307.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.45;SOR=2.139 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2336,206,0 chr1 21168141 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.524;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 21169081 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 21177786 . G A 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.15;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:59,0,34 chr1 21227440 . T C 332.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.165;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.80;ReadPosRankSum=0.814;SOR=0.610 GT:AD:DP:GQ:PL 0/1:5,11:16:99:361,0,160 chr1 21227826 . A G 2112.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.08;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2141,186,0 chr1 21233760 . G C 2005.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.008;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.18;ReadPosRankSum=0.210;SOR=0.722 GT:AD:DP:GQ:PL 0/1:51,73:124:99:2034,0,1385 chr1 21236670 . G A 467.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.248;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.76;ReadPosRankSum=1.303;SOR=0.582 GT:AD:DP:GQ:PL 0/1:18,16:34:99:496,0,612 chr1 21242860 . A G 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr1 21245108 . G A 6079.77 PASS AC=2;AF=1.00;AN=2;DP=188;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.34;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,188:188:99:6108,564,0 chr1 21247229 . G A 6369.77 PASS AC=2;AF=1.00;AN=2;DP=198;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.17;SOR=1.597 GT:AD:DP:GQ:PL 1/1:0,198:198:99:6398,591,0 chr1 21253852 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 21255855 . T C 1666.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.83;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1695,138,0 chr1 21256328 . G T 175.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.40;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:204,15,0 chr1 21257432 . C T 4000.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.79;SOR=2.407 GT:AD:DP:GQ:PL 1/1:0,115:115:99:4029,346,0 chr1 21257480 . A G 6100.77 PASS AC=2;AF=1.00;AN=2;DP=187;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.62;SOR=1.462 GT:AD:DP:GQ:PL 1/1:0,187:187:99:6129,561,0 chr1 21258448 . T C 696.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.42;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,19:19:57:725,57,0 chr1 21260952 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 21345450 . T G 300.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.742;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=1.580;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.57;ReadPosRankSum=-1.757;SOR=0.560 GT:AD:DP:GQ:PL 0/1:13,13:26:99:329,0,363 chr1 21345692 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 21363397 . C A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 21366119 . A G 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 21411527 . A G 1649.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.59;QD=33.90;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1678,141,0 chr1 21411766 . C T 444.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.486;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-1.413;SOR=0.495 GT:AD:DP:GQ:PL 0/1:15,16:31:99:473,0,499 chr1 21415719 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.46;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 21415748 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.46;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 21427222 . T C 293.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.00;QD=34.04;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:322,24,0 chr1 21427500 . G A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 21427790 . A C 3688.77 PASS AC=2;AF=1.00;AN=2;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.00;QD=32.64;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,113:113:99:3717,339,0 chr1 21428503 . C T 4909.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-1.261;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=3.240;MLEAC=2;MLEAF=1.00;MQ=40.02;MQRankSum=0.216;QD=28.06;ReadPosRankSum=-1.047;SOR=0.409 GT:AD:DP:GQ:PL 1/1:1,174:175:99:4938,483,0 chr1 21428854 . C T 2988.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.81;QD=31.13;SOR=1.076 GT:AD:DP:GQ:PL 1/1:0,96:96:99:3017,288,0 chr1 21428960 . G A 864.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.50;QD=25.64;SOR=4.003 GT:AD:DP:GQ:PL 1/1:0,23:23:69:893,69,0 chr1 21429263 . G C 14508.77 PASS AC=2;AF=1.00;AN=2;DP=468;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.62;QD=31.07;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,467:467:99:14537,1400,0 chr1 21429374 . A G 10996.77 PASS AC=2;AF=1.00;AN=2;DP=331;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.88;QD=33.22;SOR=1.308 GT:AD:DP:GQ:PL 1/1:0,331:331:99:11025,993,0 chr1 21429413 . G A 8083.77 PASS AC=2;AF=1.00;AN=2;DP=248;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.86;QD=32.60;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,248:248:99:8112,745,0 chr1 21429515 . G T 2815.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.48;QD=34.76;SOR=3.070 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2844,243,0 chr1 21429576 . G A 967.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.12;QD=35.08;SOR=4.255 GT:AD:DP:GQ:PL 1/1:0,26:26:78:996,78,0 chr1 21429676 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.01;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 21431376 . G A 90.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.01;QD=22.51;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:118,12,0 chr1 21434287 . C T 125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.97;ReadPosRankSum=0.967;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:62:154,0,62 chr1 21436639 . T A 1350.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.16;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1379,126,0 chr1 21440170 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 21452972 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 21459683 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 21459758 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 21468895 . A G 2952.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.18;SOR=1.557 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2981,267,0 chr1 21470926 . T C 176.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.81;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:205,15,0 chr1 21471503 . G A 1217.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.05;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1246,114,0 chr1 21472996 . T C 1662.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.04;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1691,141,0 chr1 21473330 . A G 2033.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.41;SOR=5.018 GT:AD:DP:GQ:PL 1/1:0,51:51:99:2062,153,0 chr1 21473692 . T G 716.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.40;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:745,54,0 chr1 21473726 . C T 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.19;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 21474853 . G A 696.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.90;SOR=2.948 GT:AD:DP:GQ:PL 1/1:0,19:19:57:725,57,0 chr1 21478322 . T G 8265.77 PASS AC=2;AF=1.00;AN=2;DP=244;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.88;SOR=2.026 GT:AD:DP:GQ:PL 1/1:0,244:244:99:8294,731,0 chr1 21478555 . C T 316.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.80;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:33:345,33,0 chr1 21479237 . A G 4101.77 PASS AC=2;AF=1.00;AN=2;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=2.468 GT:AD:DP:GQ:PL 1/1:0,118:118:99:4130,354,0 chr1 21479485 . G A 2522.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.30;SOR=4.080 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2551,201,0 chr1 21479954 . T C 537.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.61;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,16:16:48:566,48,0 chr1 21480126 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 21480128 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 21480131 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 21481371 . A G 93.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.11;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0 chr1 21483031 . A C 241.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.43;QD=34.54;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:270,21,0 chr1 21488186 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 21507501 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 21524969 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 21532957 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 21533014 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 21562523 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 21562650 . A G 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 21563142 . T C 4346.77 PASS AC=2;AF=1.00;AN=2;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.83;SOR=0.996 GT:AD:DP:GQ:PL 1/1:0,141:141:99:4375,423,0 chr1 21563893 . G A 1806.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.53;SOR=6.229 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1835,135,0 chr1 21563971 . A G 6378.77 PASS AC=2;AF=1.00;AN=2;DP=166;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.59;SOR=4.964 GT:AD:DP:GQ:PL 1/1:0,166:166:99:6407,499,0 chr1 21568242 . T C 1623.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.155;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=0.661;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.21;ReadPosRankSum=0.782;SOR=0.791 GT:AD:DP:GQ:PL 0/1:71,62:133:99:1652,0,1772 chr1 21568292 . G T 1069.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.581;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=1.055;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.86;ReadPosRankSum=0.262;SOR=0.551 GT:AD:DP:GQ:PL 0/1:34,38:72:99:1098,0,994 chr1 21568323 . T C 745.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.321;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=9.127;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.76;ReadPosRankSum=2.026;SOR=0.048 GT:AD:DP:GQ:PL 0/1:18,24:42:99:774,0,593 chr1 21568831 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 21570394 . G T 2851.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.240;ClippingRankSum=0.000;DP=222;ExcessHet=3.0103;FS=1.073;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=-0.082;SOR=0.803 GT:AD:DP:GQ:PL 0/1:110,112:222:99:2880,0,2836 chr1 21570425 . G A 2801.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.514;ClippingRankSum=0.000;DP=167;ExcessHet=3.0103;FS=0.628;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.78;ReadPosRankSum=-0.710;SOR=0.627 GT:AD:DP:GQ:PL 0/1:89,78:167:99:2830,0,5031 chr1 21570432 . C T 2676.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.837;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=2.465;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.50;ReadPosRankSum=0.490;SOR=0.964 GT:AD:DP:GQ:PL 0/1:86,67:153:99:2705,0,5015 chr1 21570636 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 21570644 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 21573619 . G A 1629.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.679;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=1.765;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.70;ReadPosRankSum=1.444;SOR=0.970 GT:AD:DP:GQ:PL 0/1:62,57:119:99:1658,0,1789 chr1 21573653 . C G 3528.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.578;ClippingRankSum=0.000;DP=182;ExcessHet=3.0103;FS=2.767;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.39;ReadPosRankSum=0.392;SOR=0.928 GT:AD:DP:GQ:PL 0/1:92,90:182:99:3557,0,4466 chr1 21573658 . T C 3623.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.798;ClippingRankSum=0.000;DP=195;ExcessHet=3.0103;FS=5.413;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.58;ReadPosRankSum=0.281;SOR=1.118 GT:AD:DP:GQ:PL 0/1:99,96:195:99:3652,0,4500 chr1 21573678 . A G 3609.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.498;ClippingRankSum=0.000;DP=250;ExcessHet=3.0103;FS=7.434;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.44;ReadPosRankSum=-1.264;SOR=1.126 GT:AD:DP:GQ:PL 0/1:120,130:250:99:3638,0,3164 chr1 21573903 . A C 3147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.774;ClippingRankSum=0.000;DP=178;ExcessHet=3.0103;FS=8.570;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.78;ReadPosRankSum=0.066;SOR=1.333 GT:AD:DP:GQ:PL 0/1:94,83:177:99:3176,0,3730 chr1 21573904 . G T 3147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.892;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=8.652;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.68;ReadPosRankSum=0.490;SOR=1.358 GT:AD:DP:GQ:PL 0/1:96,82:178:99:3176,0,3730 chr1 21573927 . A G 4601.77 PASS AC=2;AF=1.00;AN=2;DP=137;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.84;SOR=2.134 GT:AD:DP:GQ:PL 1/1:0,136:136:99:4630,407,0 chr1 21573951 . A G 1106.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.008;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=2.931;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.44;ReadPosRankSum=-1.257;SOR=1.060 GT:AD:DP:GQ:PL 0/1:63,43:106:99:1135,0,1705 chr1 21573966 . A C 1394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.039;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=2.382;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.11;ReadPosRankSum=0.517;SOR=0.428 GT:AD:DP:GQ:PL 0/1:28,49:77:99:1423,0,773 chr1 21576457 . C A 2384.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.214;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=1.357;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.93;ReadPosRankSum=-0.462;SOR=1.135 GT:AD:DP:GQ:PL 0/1:61,72:133:99:2413,0,1977 chr1 21576687 . C T 2873.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.309;ClippingRankSum=0.000;DP=218;ExcessHet=3.0103;FS=0.531;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.24;ReadPosRankSum=-1.182;SOR=0.746 GT:AD:DP:GQ:PL 0/1:105,112:217:99:2902,0,2809 chr1 21577774 . A G 1500.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.36;SOR=4.863 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1529,108,0 chr1 21578081 . A G 129.03 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.210;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.51;ReadPosRankSum=1.383;SOR=0.941 GT:AD:DP:GQ:PL 0/1:1,5:6:12:157,0,12 chr1 21584999 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 21598615 . T C 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 21599164 . C T 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 21599694 . C T 289.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.34;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:33:318,33,0 chr1 21601327 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 21601851 . C G 567.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.345;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.20;ReadPosRankSum=-0.575;SOR=0.478 GT:AD:DP:GQ:PL 0/1:24,19:43:99:596,0,845 chr1 21602767 . A G 3396.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.60;SOR=0.748 GT:AD:DP:GQ:PL 1/1:0,111:111:99:3425,333,0 chr1 21604049 . C T 1155.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.451;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=3.088;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=-0.879;SOR=1.329 GT:AD:DP:GQ:PL 0/1:47,42:89:99:1184,0,1535 chr1 21606037 . C A 1205.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.59;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1234,111,0 chr1 21606132 . G A 950.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.801;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=4.468;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.68;ReadPosRankSum=-0.762;SOR=1.060 GT:AD:DP:GQ:PL 0/1:38,37:75:99:979,0,953 chr1 21606700 . C T 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 21608174 . G A 1258.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.299;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=4.394;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=-0.124;SOR=0.341 GT:AD:DP:GQ:PL 0/1:36,48:84:99:1287,0,894 chr1 21608940 . G T 4492.77 PASS AC=2;AF=1.00;AN=2;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.04;SOR=1.066 GT:AD:DP:GQ:PL 1/1:0,136:136:99:4521,408,0 chr1 21609212 . T G 163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.619;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.47;ReadPosRankSum=0.319;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,6:8:59:192,0,59 chr1 21611314 . C G 1036.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.72;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1065,84,0 chr1 21611882 . T G 2049.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.814;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=0.641;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.85;ReadPosRankSum=0.634;SOR=0.607 GT:AD:DP:GQ:PL 0/1:66,72:138:99:2078,0,1940 chr1 21612404 . A G 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 21613000 . G C 1714.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.943;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=0.699;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.99;ReadPosRankSum=0.946;SOR=0.775 GT:AD:DP:GQ:PL 0/1:82,61:143:99:1743,0,2378 chr1 21613248 . G C 1835.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.745;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=3.351;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=-0.442;SOR=1.022 GT:AD:DP:GQ:PL 0/1:76,64:140:99:1864,0,2096 chr1 21613792 . G C 3225.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.779;ClippingRankSum=0.000;DP=223;ExcessHet=3.0103;FS=2.372;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.53;ReadPosRankSum=-1.321;SOR=0.522 GT:AD:DP:GQ:PL 0/1:111,111:222:99:3254,0,3447 chr1 21614062 . C T 2372.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.484;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=1.233;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.96;ReadPosRankSum=-0.570;SOR=0.564 GT:AD:DP:GQ:PL 0/1:81,89:170:99:2401,0,2095 chr1 21614530 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 21617011 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 21617327 . G A 1469.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.563;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=3.545;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.36;ReadPosRankSum=-1.173;SOR=1.101 GT:AD:DP:GQ:PL 0/1:54,56:110:99:1498,0,1482 chr1 21617859 . A G 2689.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.895;ClippingRankSum=0.000;DP=194;ExcessHet=3.0103;FS=0.559;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.94;ReadPosRankSum=1.629;SOR=0.760 GT:AD:DP:GQ:PL 0/1:90,103:193:99:2718,0,2514 chr1 21619376 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 21619903 . T C 628.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.124;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=2.431;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.49;ReadPosRankSum=-0.129;SOR=1.638 GT:AD:DP:GQ:PL 0/1:15,19:34:99:657,0,466 chr1 21619922 . G A 1929.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.18;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1958,159,0 chr1 21620542 . G T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 21620657 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 21620725 . C G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 21626097 . G A 282.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.451;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=-0.282;SOR=0.610 GT:AD:DP:GQ:PL 0/1:11,10:21:99:311,0,397 chr1 21626533 . A C 483.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.240;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=4.501;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.23;ReadPosRankSum=1.982;SOR=1.871 GT:AD:DP:GQ:PL 0/1:19,15:34:99:512,0,632 chr1 21626645 . A G 1105.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.50;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1134,84,0 chr1 21626794 . G A 3212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.082;ClippingRankSum=0.000;DP=247;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.01;ReadPosRankSum=0.557;SOR=0.707 GT:AD:DP:GQ:PL 0/1:126,121:247:99:3241,0,3507 chr1 21626811 . G A 3702.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.295;ClippingRankSum=0.000;DP=303;ExcessHet=3.0103;FS=3.327;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.22;ReadPosRankSum=0.607;SOR=0.524 GT:AD:DP:GQ:PL 0/1:158,145:303:99:3731,0,4519 chr1 21626943 . A G 13306.77 PASS AC=2;AF=1.00;AN=2;DP=432;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.80;SOR=0.951 GT:AD:DP:GQ:PL 1/1:0,432:432:99:13335,1295,0 chr1 21634845 . G A 1198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.665;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=1.584;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.52;ReadPosRankSum=1.025;SOR=0.504 GT:AD:DP:GQ:PL 0/1:61,53:114:99:1227,0,1662 chr1 21634846 . A T 4313.77 PASS AC=2;AF=1.00;AN=2;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.59;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,113:113:99:4342,340,0 chr1 21638309 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 21647421 . A C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 21649430 . G T 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.824;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=2.788;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.61;ReadPosRankSum=0.057;SOR=1.730 GT:AD:DP:GQ:PL 0/1:15,6:21:99:188,0,446 chr1 21650452 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 21651972 . G A 46.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:21:75,0,21 chr1 21656761 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 21657118 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 21659189 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 21659194 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 21682672 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 21687068 . C A 551.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.31;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:580,42,0 chr1 21687278 . G A 1374.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.89;SOR=1.203 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1403,136,0 chr1 21690226 . T C 335.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.67;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:364,27,0 chr1 21723444 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 21724156 . C A 3560.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.59;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,106:106:99:3589,318,0 chr1 21725380 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 21736656 . G A 3617.77 PASS AC=2;AF=1.00;AN=2;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.50;SOR=2.014 GT:AD:DP:GQ:PL 1/1:0,108:108:99:3646,324,0 chr1 21739943 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 21753430 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 21756430 . G A 207.79 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:23:236,23,0 chr1 21763763 . C T 80.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0 chr1 21769346 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 21782877 . G A 3695.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.29;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3724,364,0 chr1 21796997 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 21801722 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 21814713 . A C 3319.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.58;SOR=1.735 GT:AD:DP:GQ:PL 1/1:0,96:96:99:3348,288,0 chr1 21821271 . A G 1326.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.686;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=2.221;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.79;ReadPosRankSum=-1.162;SOR=1.061 GT:AD:DP:GQ:PL 0/1:41,43:84:99:1355,0,1149 chr1 21821671 . G A 1031.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.816;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=1.058;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.74;ReadPosRankSum=-0.728;SOR=0.553 GT:AD:DP:GQ:PL 0/1:33,37:70:99:1060,0,1034 chr1 21821758 . G A 503.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.762;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=1.509;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.79;ReadPosRankSum=0.669;SOR=1.230 GT:AD:DP:GQ:PL 0/1:14,16:30:99:532,0,426 chr1 21823442 . T C 6418.77 PASS AC=2;AF=1.00;AN=2;DP=186;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=1.185 GT:AD:DP:GQ:PL 1/1:0,186:186:99:6447,558,0 chr1 21823764 . C T 1443.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.018;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=3.501;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.36;ReadPosRankSum=-1.319;SOR=1.196 GT:AD:DP:GQ:PL 0/1:46,48:94:99:1472,0,1325 chr1 21829230 . T C 979.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.52;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:75:1008,75,0 chr1 21831196 . G A 7156.77 PASS AC=2;AF=1.00;AN=2;DP=226;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.81;SOR=0.983 GT:AD:DP:GQ:PL 1/1:0,225:225:99:7185,671,0 chr1 21831664 . A G 2512.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.335;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=0.612;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.32;ReadPosRankSum=1.163;SOR=0.639 GT:AD:DP:GQ:PL 0/1:69,85:154:99:2541,0,1839 chr1 21831870 . G A 427.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.512;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=3.419;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.96;ReadPosRankSum=1.347;SOR=0.257 GT:AD:DP:GQ:PL 0/1:14,19:33:99:456,0,418 chr1 21832254 . C A 555.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.803;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.253;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.487;SOR=1.038 GT:AD:DP:GQ:PL 0/1:30,22:52:99:593,0,815 chr1 21833216 . G A 1116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=3.156;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.55;ReadPosRankSum=0.000;SOR=1.177 GT:AD:DP:GQ:PL 0/1:48,41:89:99:1145,0,1296 chr1 21833281 . G A 2336.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.444;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=2.057;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.60;ReadPosRankSum=2.169;SOR=0.923 GT:AD:DP:GQ:PL 0/1:76,84:160:99:2365,0,2160 chr1 21833550 . C T 1547.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.245;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=0.745;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.07;ReadPosRankSum=-1.234;SOR=0.571 GT:AD:DP:GQ:PL 0/1:56,54:110:99:1576,0,1629 chr1 21833647 . T C 1030.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.407;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.990;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.90;ReadPosRankSum=-1.701;SOR=0.543 GT:AD:DP:GQ:PL 0/1:26,35:61:99:1059,0,1025 chr1 21833655 . C T 682.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.674;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.67;ReadPosRankSum=0.395;SOR=0.752 GT:AD:DP:GQ:PL 0/1:36,28:64:99:711,0,1423 chr1 21834222 . T C 127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.97;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:156,0,310 chr1 21834230 . G A 127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.97;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:156,0,310 chr1 21835192 . C T 212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.52;ReadPosRankSum=-1.074;SOR=0.425 GT:AD:DP:GQ:PL 0/1:10,7:17:99:241,0,367 chr1 21835760 . C G 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.109;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=3.358;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.98;ReadPosRankSum=1.142;SOR=0.061 GT:AD:DP:GQ:PL 0/1:7,7:14:99:182,0,249 chr1 21836660 . A C 239.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=29.98;ReadPosRankSum=-0.319;SOR=2.833 GT:AD:DP:GQ:PL 0/1:1,7:8:18:268,0,18 chr1 21836897 . G A 1860.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.627;ClippingRankSum=0.000;DP=130;ExcessHet=3.0103;FS=1.398;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.31;ReadPosRankSum=-0.871;SOR=0.812 GT:AD:DP:GQ:PL 0/1:59,71:130:99:1889,0,1564 chr1 21839408 . A G 5227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.401;ClippingRankSum=0.000;DP=340;ExcessHet=3.0103;FS=1.289;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.38;ReadPosRankSum=-1.119;SOR=0.773 GT:AD:DP:GQ:PL 0/1:154,186:340:99:5256,0,4135 chr1 21839615 . C T 1659.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.312;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=2.617;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.85;ReadPosRankSum=-0.327;SOR=1.282 GT:AD:DP:GQ:PL 0/1:40,53:93:99:1688,0,1197 chr1 21839703 . C T 275.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.707;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=1.685;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.49;ReadPosRankSum=-1.203;SOR=1.230 GT:AD:DP:GQ:PL 0/1:15,9:24:99:304,0,486 chr1 21841112 . C T 2288.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.195;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=2.574;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.748;SOR=0.462 GT:AD:DP:GQ:PL 0/1:61,79:140:99:2317,0,1733 chr1 21841723 . C T 921.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.569;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.02;ReadPosRankSum=0.205;SOR=0.717 GT:AD:DP:GQ:PL 0/1:59,33:92:99:950,0,1764 chr1 21841817 . A G 887.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.121;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.31;ReadPosRankSum=-1.033;SOR=0.685 GT:AD:DP:GQ:PL 0/1:27,31:58:99:916,0,783 chr1 21842308 . T C 2639.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.122;ClippingRankSum=0.000;DP=237;ExcessHet=3.0103;FS=1.593;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.19;ReadPosRankSum=-0.615;SOR=0.573 GT:AD:DP:GQ:PL 0/1:133,103:236:99:2668,0,3573 chr1 21842489 . T C 827.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.431;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.647;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.39;ReadPosRankSum=0.014;SOR=0.377 GT:AD:DP:GQ:PL 0/1:18,27:45:99:856,0,580 chr1 21842646 . G C 228.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.917;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=3.123;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.60;ReadPosRankSum=0.221;SOR=0.141 GT:AD:DP:GQ:PL 0/1:5,8:13:99:257,0,170 chr1 21842729 . C T 660.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.954;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.52;ReadPosRankSum=0.637;SOR=0.400 GT:AD:DP:GQ:PL 0/1:19,21:40:99:689,0,673 chr1 21842960 . G A 1478.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.305;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=2.689;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.08;ReadPosRankSum=1.989;SOR=0.458 GT:AD:DP:GQ:PL 0/1:50,55:105:99:1507,0,1310 chr1 21843190 . G A 1592.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.086;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=8.723;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.62;ReadPosRankSum=-0.654;SOR=2.109 GT:AD:DP:GQ:PL 0/1:55,47:102:99:1621,0,1739 chr1 21843433 . G A 2367.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.089;ClippingRankSum=0.000;DP=172;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.77;ReadPosRankSum=0.029;SOR=0.663 GT:AD:DP:GQ:PL 0/1:87,85:172:99:2396,0,2470 chr1 21845965 . T C 155.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.97;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:184,18,0 chr1 21847933 . T G 5257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.117;ClippingRankSum=0.000;DP=375;ExcessHet=3.0103;FS=0.373;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.02;ReadPosRankSum=1.050;SOR=0.657 GT:AD:DP:GQ:PL 0/1:182,193:375:99:5286,0,4732 chr1 21848107 . A G 6704.77 PASS AC=2;AF=1.00;AN=2;DP=205;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.71;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,205:205:99:6733,616,0 chr1 21849129 . A T 990.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.065;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=4.895;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.57;ReadPosRankSum=-0.303;SOR=0.143 GT:AD:DP:GQ:PL 0/1:37,31:68:99:1019,0,1304 chr1 21849945 . C T 212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.615;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.37;ReadPosRankSum=0.448;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,7:13:99:241,0,211 chr1 21850191 . T A 4390.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.681;ClippingRankSum=0.000;DP=291;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.09;ReadPosRankSum=0.545;SOR=0.695 GT:AD:DP:GQ:PL 0/1:127,164:291:99:4419,0,3367 chr1 21850626 . A G 345.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.989;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.34;ReadPosRankSum=1.123;SOR=0.804 GT:AD:DP:GQ:PL 0/1:6,11:17:99:374,0,199 chr1 21853180 . T C 647.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.767;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=1.582;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.61;ReadPosRankSum=-0.911;SOR=1.264 GT:AD:DP:GQ:PL 0/1:20,19:39:99:676,0,536 chr1 21854055 . T C 4781.77 PASS AC=2;AF=1.00;AN=2;DP=134;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.66;SOR=1.424 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4810,402,0 chr1 21854455 . C T 254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=0.176;SOR=0.941 GT:AD:DP:GQ:PL 0/1:9,8:17:99:283,0,325 chr1 21855230 . G C 122.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.35;ReadPosRankSum=-1.345;SOR=0.330 GT:AD:DP:GQ:PL 0/1:3,5:8:99:151,0,101 chr1 21856978 . A C 7125.77 PASS AC=2;AF=1.00;AN=2;DP=212;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.61;SOR=1.621 GT:AD:DP:GQ:PL 1/1:0,212:212:99:7154,637,0 chr1 21857246 . A G 4718.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.286;ClippingRankSum=0.000;DP=399;ExcessHet=3.0103;FS=1.178;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=1.022;SOR=0.775 GT:AD:DP:GQ:PL 0/1:209,189:398:99:4747,0,5759 chr1 21859741 . A G 6202.77 PASS AC=2;AF=1.00;AN=2;DP=175;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.67;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,175:175:99:6231,525,0 chr1 21864538 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 21864961 . G A 3161.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.64;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,94:94:99:3190,281,0 chr1 21866031 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 21872588 . A T 3617.77 PASS AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.79;SOR=1.094 GT:AD:DP:GQ:PL 1/1:0,104:104:99:3646,312,0 chr1 21872921 . G A 2755.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.710;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=4.971;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.38;ReadPosRankSum=-0.889;SOR=1.031 GT:AD:DP:GQ:PL 0/1:109,97:206:99:2784,0,3136 chr1 21873173 . C T 1083.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.447;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=1.231;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.06;ReadPosRankSum=0.339;SOR=0.397 GT:AD:DP:GQ:PL 0/1:48,35:83:99:1112,0,1604 chr1 21873328 . G A 1738.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.655;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=2.743;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.51;ReadPosRankSum=-0.867;SOR=0.461 GT:AD:DP:GQ:PL 0/1:77,62:139:99:1767,0,2390 chr1 21873587 . C T 1558.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.535;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=-0.605;SOR=0.775 GT:AD:DP:GQ:PL 0/1:65,54:119:99:1587,0,2036 chr1 21873589 . T C 4123.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=2.197;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=3.328;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.83;ReadPosRankSum=0.517;SOR=2.142 GT:AD:DP:GQ:PL 1/1:2,114:116:99:4152,299,0 chr1 21873807 . G A 241.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.603;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.09;ReadPosRankSum=-0.699;SOR=0.777 GT:AD:DP:GQ:PL 0/1:11,9:20:99:270,0,365 chr1 21873980 . C T 1722.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.610;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=1.373;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.39;ReadPosRankSum=-0.779;SOR=0.575 GT:AD:DP:GQ:PL 0/1:67,72:139:99:1751,0,1792 chr1 21874342 . C G 1262.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.57;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1291,120,0 chr1 21874505 . C T 1143.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.483;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.17;ReadPosRankSum=1.023;SOR=0.744 GT:AD:DP:GQ:PL 0/1:55,39:94:99:1172,0,1774 chr1 21875303 . G C 288.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.463;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=1.897;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.189;SOR=1.329 GT:AD:DP:GQ:PL 0/1:12,10:22:99:317,0,333 chr1 21875387 . C T 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 21875616 . C T 3198.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.08;SOR=2.662 GT:AD:DP:GQ:PL 1/1:0,91:91:99:3227,272,0 chr1 21878013 . C T 155.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.97;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:184,18,0 chr1 21878915 . T C 1594.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.76;SOR=1.900 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1623,126,0 chr1 21878973 . T C 2721.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.14;SOR=2.864 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2750,222,0 chr1 21879262 . C A 1653.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.567;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=6.819;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.98;ReadPosRankSum=-1.988;SOR=1.760 GT:AD:DP:GQ:PL 0/1:41,51:92:99:1682,0,1231 chr1 21880156 . T C 10974.77 PASS AC=2;AF=1.00;AN=2;DP=327;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.56;SOR=0.959 GT:AD:DP:GQ:PL 1/1:0,327:327:99:11003,981,0 chr1 21880449 . G A 6017.77 PASS AC=2;AF=1.00;AN=2;DP=173;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.88;SOR=1.057 GT:AD:DP:GQ:PL 1/1:0,171:171:99:6046,513,0 chr1 21880742 . T C 3025.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.25;SOR=1.130 GT:AD:DP:GQ:PL 1/1:0,91:91:99:3054,273,0 chr1 21881537 . C T 1745.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.74;SOR=1.877 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1774,165,0 chr1 21884729 . T C 3995.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.881;ClippingRankSum=0.000;DP=305;ExcessHet=3.0103;FS=2.526;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.19;ReadPosRankSum=-0.431;SOR=0.565 GT:AD:DP:GQ:PL 0/1:149,154:303:99:4024,0,3977 chr1 21885187 . C T 1257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.748;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.72;ReadPosRankSum=0.072;SOR=0.700 GT:AD:DP:GQ:PL 0/1:41,39:80:99:1286,0,1397 chr1 21885632 . C A 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.64;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr1 21887634 . A G 6616.77 PASS AC=2;AF=1.00;AN=2;DP=211;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.51;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,210:210:99:6645,630,0 chr1 21888595 . T C 746.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.72;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,26:26:78:775,78,0 chr1 21889786 . C T 6693.77 PASS AC=2;AF=1.00;AN=2;DP=201;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.30;SOR=1.820 GT:AD:DP:GQ:PL 1/1:0,201:201:99:6722,603,0 chr1 21890615 . G A 5422.77 PASS AC=2;AF=1.00;AN=2;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.71;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,171:171:99:5451,513,0 chr1 21893029 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 21894117 . A T 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:31:115,0,31 chr1 21901746 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 21907931 . G C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.42;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 21910056 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 21953395 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 21957352 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 21966782 . C T 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr1 21966808 . G T 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr1 21973030 . T G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.60;QD=27.79;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 21973361 . C T 1588.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.435;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=2.674;MLEAC=1;MLEAF=0.500;MQ=58.46;MQRankSum=-3.792;QD=14.06;ReadPosRankSum=0.681;SOR=1.018 GT:AD:DP:GQ:PL 0/1:54,59:113:99:1617,0,1317 chr1 21976695 . G A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.80;MQRankSum=-0.967;QD=14.26;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:71,0,33 chr1 21976972 . C T 1231.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.170;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=3.282;MLEAC=1;MLEAF=0.500;MQ=57.58;MQRankSum=3.736;QD=8.93;ReadPosRankSum=-0.845;SOR=1.010 GT:AD:DP:GQ:PL 0/1:86,52:138:99:1260,0,2400 chr1 21977008 . T C 741.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.563;ClippingRankSum=0.000;DP=172;ExcessHet=3.0103;FS=1.631;MLEAC=1;MLEAF=0.500;MQ=58.07;MQRankSum=-10.437;QD=4.36;ReadPosRankSum=3.302;SOR=0.534 GT:AD:DP:GQ:PL 0/1:141,29:170:99:770,0,6364 chr1 21977031 . G A 708.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.016;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=0.770;MLEAC=1;MLEAF=0.500;MQ=58.24;MQRankSum=-10.620;QD=3.98;ReadPosRankSum=0.238;SOR=0.570 GT:AD:DP:GQ:PL 0/1:150,28:178:99:737,0,6756 chr1 21977209 . C A 2768.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.18;SOR=2.777 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2797,243,0 chr1 21977736 . T C 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.88;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr1 21977935 . C G 4471.77 PASS AC=2;AF=1.00;AN=2;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.01;QD=28.80;SOR=1.516 GT:AD:DP:GQ:PL 1/1:0,99:99:99:4500,301,0 chr1 21977936 . C T 4471.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.08;QD=31.50;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,100:100:99:4500,301,0 chr1 21977938 . G C 4471.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.08;QD=24.65;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,100:100:99:4500,301,0 chr1 21978175 . G C 123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.504;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=24.359;MLEAC=1;MLEAF=0.500;MQ=44.63;MQRankSum=-1.337;QD=2.38;ReadPosRankSum=-0.014;SOR=3.898 GT:AD:DP:GQ:PL 0/1:46,6:52:99:152,0,1890 chr1 21978178 . T C 164.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.443;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=21.573;MLEAC=1;MLEAF=0.500;MQ=45.78;MQRankSum=0.176;QD=3.00;ReadPosRankSum=-1.299;SOR=3.023 GT:AD:DP:GQ:PL 0/1:46,9:55:99:193,0,1891 chr1 21978219 . A G 1147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.650;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.93;MQRankSum=-0.795;QD=22.07;ReadPosRankSum=-0.220;SOR=0.770 GT:AD:DP:GQ:PL 0/1:17,35:52:99:1176,0,439 chr1 21978338 . C A 1295.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.933;ClippingRankSum=0.000;DP=172;ExcessHet=3.0103;FS=2.943;MLEAC=1;MLEAF=0.500;MQ=58.37;MQRankSum=-3.873;QD=7.53;ReadPosRankSum=-2.024;SOR=0.461 GT:AD:DP:GQ:PL 0/1:115,57:172:99:1324,0,3067 chr1 21978554 . T C 212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.720;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=3.550;MLEAC=1;MLEAF=0.500;MQ=52.15;MQRankSum=-3.060;QD=3.04;ReadPosRankSum=-0.252;SOR=1.323 GT:AD:DP:GQ:PL 0/1:58,12:70:99:241,0,1756 chr1 21978605 . G A 106.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.071;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.86;MQRankSum=-4.342;QD=4.27;ReadPosRankSum=-0.619;SOR=0.434 GT:AD:DP:GQ:PL 0/1:19,6:25:99:135,0,669 chr1 21978620 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.682;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.81;MQRankSum=-4.257;QD=2.34;ReadPosRankSum=1.018;SOR=0.200 GT:AD:DP:GQ:PL 0/1:17,3:20:75:75,0,1207 chr1 21978623 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.81;MQRankSum=-4.257;QD=2.34;ReadPosRankSum=1.018;SOR=0.200 GT:AD:DP:GQ:PL 0/1:17,3:20:75:75,0,1207 chr1 21978625 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.735;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.63;MQRankSum=-4.136;QD=2.46;ReadPosRankSum=0.907;SOR=0.223 GT:AD:DP:GQ:PL 0/1:16,3:19:75:75,0,1207 chr1 21980759 . G A 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.46;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 21980847 . C T 394.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.44;QD=32.90;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,12:12:36:423,36,0 chr1 21980865 . C G 394.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.44;QD=32.90;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,12:12:36:423,36,0 chr1 21981045 . C T 593.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.27;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,21:21:63:622,63,0 chr1 21982803 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 21982827 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.79;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 21982973 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 21983587 . G A 1619.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.04;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1648,129,0 chr1 21983646 . T G 5154.77 PASS AC=2;AF=1.00;AN=2;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.69;QD=28.84;SOR=2.657 GT:AD:DP:GQ:PL 1/1:0,114:114:99:5183,349,0 chr1 21983652 . C T 5356.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.15;QD=29.16;SOR=2.462 GT:AD:DP:GQ:PL 1/1:0,122:122:99:5385,367,0 chr1 21983697 . T C 1919.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.406;ClippingRankSum=0.000;DP=189;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.89;MQRankSum=-0.400;QD=10.16;ReadPosRankSum=-1.156;SOR=0.708 GT:AD:DP:GQ:PL 0/1:114,75:189:99:1948,0,3325 chr1 21983769 . G C 9562.77 PASS AC=2;AF=1.00;AN=2;DP=298;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.89;QD=32.09;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,298:298:99:9591,895,0 chr1 21983918 . A G 5877.77 PASS AC=2;AF=1.00;AN=2;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.49;QD=32.12;SOR=2.506 GT:AD:DP:GQ:PL 1/1:0,133:133:99:5906,400,0 chr1 21983920 . A G 5877.77 PASS AC=2;AF=1.00;AN=2;DP=126;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.20;QD=28.56;SOR=2.538 GT:AD:DP:GQ:PL 1/1:0,126:126:99:5906,400,0 chr1 21984169 . G T 2993.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.19;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,93:93:99:3022,279,0 chr1 21984181 . C T 2920.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.10;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2949,273,0 chr1 21984232 . G C 2630.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.30;SOR=1.281 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2659,237,0 chr1 21984331 . T C 976.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.87;QD=33.68;SOR=2.546 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1005,87,0 chr1 21984440 . C G 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 21984920 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 21986221 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 21986225 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 21986262 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 21986524 . G T 3732.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.348;ClippingRankSum=0.000;DP=326;ExcessHet=3.0103;FS=1.348;MLEAC=1;MLEAF=0.500;MQ=59.94;MQRankSum=-0.070;QD=11.52;ReadPosRankSum=-1.627;SOR=0.791 GT:AD:DP:GQ:PL 0/1:170,154:324:99:3761,0,4538 chr1 21986668 . T C 8115.77 PASS AC=2;AF=1.00;AN=2;DP=241;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.08;QD=33.82;SOR=1.660 GT:AD:DP:GQ:PL 1/1:0,240:240:99:8144,721,0 chr1 21986704 . C A 2082.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.890;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=1.535;MLEAC=1;MLEAF=0.500;MQ=55.20;MQRankSum=-0.906;QD=13.27;ReadPosRankSum=-1.090;SOR=0.883 GT:AD:DP:GQ:PL 0/1:84,73:157:99:2111,0,2457 chr1 21986878 . G A 358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=4.471;MLEAC=1;MLEAF=0.500;MQ=40.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=-1.107;SOR=0.148 GT:AD:DP:GQ:PL 0/1:13,11:24:99:387,0,471 chr1 21986976 . G C 3655.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.09;QD=28.34;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,94:94:99:3684,283,0 chr1 21987028 . G T 1662.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.042;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=5.923;MLEAC=1;MLEAF=0.500;MQ=50.62;MQRankSum=0.070;QD=10.52;ReadPosRankSum=0.003;SOR=1.160 GT:AD:DP:GQ:PL 0/1:88,70:158:99:1691,0,1967 chr1 21987196 . A T 901.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.63;SOR=3.528 GT:AD:DP:GQ:PL 1/1:0,25:25:75:930,75,0 chr1 21987951 . A C 46.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.52;QD=23.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:74,6,0 chr1 21987977 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.52;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 21987982 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.52;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 21987983 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.52;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 21988966 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 21988969 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 21989169 . C T 187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.057;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.48;MQRankSum=-0.776;QD=10.43;ReadPosRankSum=-0.836;SOR=0.512 GT:AD:DP:GQ:PL 0/1:12,6:18:99:216,0,490 chr1 21989173 . G A 187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.382;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.48;MQRankSum=-0.776;QD=10.43;ReadPosRankSum=-0.652;SOR=0.512 GT:AD:DP:GQ:PL 0/1:12,6:18:99:216,0,490 chr1 21989217 . G A 164.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.234;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.45;MQRankSum=-0.860;QD=7.16;ReadPosRankSum=-0.252;SOR=0.892 GT:AD:DP:GQ:PL 0/1:14,9:23:99:193,0,313 chr1 21998212 . T C 6992.77 PASS AC=2;AF=1.00;AN=2;DP=229;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.93;QD=30.54;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,229:229:99:7021,687,0 chr1 21998437 . A T 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.180;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.11;ReadPosRankSum=0.108;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:86:134,0,86 chr1 22001419 . C T 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.605;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.01;MQRankSum=-0.748;QD=13.43;ReadPosRankSum=0.528;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,205 chr1 22001468 . C G 197.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.91;MQRankSum=-1.366;QD=8.99;ReadPosRankSum=0.282;SOR=0.760 GT:AD:DP:GQ:PL 0/1:15,7:22:99:226,0,560 chr1 22001497 . C A 323.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.390;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=4.266;MLEAC=1;MLEAF=0.500;MQ=58.33;MQRankSum=-2.124;QD=10.12;ReadPosRankSum=-0.941;SOR=0.191 GT:AD:DP:GQ:PL 0/1:19,13:32:99:352,0,663 chr1 22001566 . G C 632.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.730;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=2.359;MLEAC=1;MLEAF=0.500;MQ=57.56;MQRankSum=-6.588;QD=8.55;ReadPosRankSum=2.382;SOR=0.393 GT:AD:DP:GQ:PL 0/1:56,18:74:99:661,0,2271 chr1 22001568 . G T 632.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.689;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=1.009;MLEAC=1;MLEAF=0.500;MQ=57.05;MQRankSum=-6.779;QD=8.44;ReadPosRankSum=1.354;SOR=0.536 GT:AD:DP:GQ:PL 0/1:55,20:75:99:661,0,2271 chr1 22001599 . A G 723.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.736;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.939;MLEAC=1;MLEAF=0.500;MQ=56.40;MQRankSum=-8.081;QD=7.87;ReadPosRankSum=-0.009;SOR=0.919 GT:AD:DP:GQ:PL 0/1:69,23:92:99:752,0,2872 chr1 22001609 . C T 881.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.824;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=1.932;MLEAC=1;MLEAF=0.500;MQ=55.94;MQRankSum=-8.673;QD=9.09;ReadPosRankSum=-2.005;SOR=1.017 GT:AD:DP:GQ:PL 0/1:71,26:97:99:910,0,2913 chr1 22001735 . C G 1839.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.094;ClippingRankSum=0.000;DP=170;ExcessHet=3.0103;FS=4.491;MLEAC=1;MLEAF=0.500;MQ=58.41;MQRankSum=-5.053;QD=10.82;ReadPosRankSum=1.418;SOR=0.583 GT:AD:DP:GQ:PL 0/1:93,77:170:99:1868,0,2358 chr1 22001786 . C T 1812.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.473;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.658;MLEAC=1;MLEAF=0.500;MQ=59.28;MQRankSum=2.889;QD=13.63;ReadPosRankSum=0.759;SOR=0.796 GT:AD:DP:GQ:PL 0/1:67,66:133:99:1841,0,1738 chr1 22002569 . C G 4338.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.091;ClippingRankSum=0.000;DP=402;ExcessHet=3.0103;FS=0.659;MLEAC=1;MLEAF=0.500;MQ=45.95;MQRankSum=-14.308;QD=10.82;ReadPosRankSum=-0.388;SOR=0.739 GT:AD:DP:GQ:PL 0/1:277,124:401:99:4367,0,14548 chr1 22002570 . C T 4339.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.085;ClippingRankSum=0.000;DP=412;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=45.99;MQRankSum=-14.251;QD=10.56;ReadPosRankSum=-0.245;SOR=0.730 GT:AD:DP:GQ:PL 0/1:285,126:411:99:4368,0,14547 chr1 22002727 . G A 3874.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=672;ExcessHet=3.0103;FS=0.600;MLEAC=1;MLEAF=0.500;MQ=52.95;MQRankSum=1.135;QD=5.77;ReadPosRankSum=0.658;SOR=0.756 GT:AD:DP:GQ:PL 0/1:481,190:671:99:3903,0,12745 chr1 22002853 . G A 548.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.184;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=11.745;MLEAC=1;MLEAF=0.500;MQ=55.19;MQRankSum=-3.126;QD=5.23;ReadPosRankSum=1.107;SOR=2.904 GT:AD:DP:GQ:PL 0/1:83,22:105:99:577,0,2976 chr1 22002914 . G C 1714.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.70;QD=30.81;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1743,138,0 chr1 22002924 . T C 212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.028;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=26.114;MLEAC=1;MLEAF=0.500;MQ=52.52;MQRankSum=-3.595;QD=4.73;ReadPosRankSum=-2.116;SOR=4.802 GT:AD:DP:GQ:PL 0/1:35,10:45:99:241,0,1140 chr1 22003152 . T C 831.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.42;QD=34.66;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,24:24:72:860,72,0 chr1 22003239 . G A 466.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.94;QD=33.34;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:495,42,0 chr1 22005078 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 22005081 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 22007195 . T C 1320.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.205;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.870;MLEAC=1;MLEAF=0.500;MQ=58.88;MQRankSum=-2.142;QD=16.93;ReadPosRankSum=-0.948;SOR=0.848 GT:AD:DP:GQ:PL 0/1:36,42:78:99:1349,0,1235 chr1 22009471 . G C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 22009627 . T C 2482.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.180;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=7.362;MLEAC=1;MLEAF=0.500;MQ=59.95;MQRankSum=-1.012;QD=14.78;ReadPosRankSum=1.879;SOR=1.329 GT:AD:DP:GQ:PL 0/1:86,82:168:99:2511,0,2408 chr1 22009784 . C G 10167.77 PASS AC=2;AF=1.00;AN=2;DP=321;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.95;QD=31.87;SOR=1.133 GT:AD:DP:GQ:PL 1/1:0,319:319:99:10196,957,0 chr1 22009812 . C T 4713.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.355;ClippingRankSum=0.000;DP=273;ExcessHet=3.0103;FS=5.085;MLEAC=1;MLEAF=0.500;MQ=59.68;MQRankSum=-1.366;QD=17.27;ReadPosRankSum=0.946;SOR=1.011 GT:AD:DP:GQ:PL 0/1:148,125:273:99:4742,0,5754 chr1 22009815 . G A 4725.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.903;ClippingRankSum=0.000;DP=265;ExcessHet=3.0103;FS=6.042;MLEAC=1;MLEAF=0.500;MQ=59.67;MQRankSum=-1.331;QD=17.83;ReadPosRankSum=0.476;SOR=1.040 GT:AD:DP:GQ:PL 0/1:142,123:265:99:4754,0,5636 chr1 22009878 . C A 2232.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.586;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=5.112;MLEAC=1;MLEAF=0.500;MQ=55.43;MQRankSum=1.008;QD=16.42;ReadPosRankSum=1.880;SOR=0.354 GT:AD:DP:GQ:PL 0/1:60,76:136:99:2261,0,1740 chr1 22010150 . G C 2076.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.047;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.92;MQRankSum=0.266;QD=15.38;ReadPosRankSum=-0.414;SOR=0.804 GT:AD:DP:GQ:PL 0/1:68,67:135:99:2105,0,2146 chr1 22029645 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 22029662 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 22044572 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22053035 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 22059571 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 22079097 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22081613 . G A 5380.77 PASS AC=2;AF=1.00;AN=2;DP=178;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.23;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,178:178:99:5409,534,0 chr1 22120655 . G C 1083.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.24;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1112,90,0 chr1 22120823 . A G 96.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:124,9,0 chr1 22121030 . G A 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.98;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 22130063 . T C 385.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.849;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.69;ReadPosRankSum=-0.472;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,12:17:99:414,0,158 chr1 22143622 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22143914 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 22143958 . G C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 22153666 . A G 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 22153726 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.00;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 22153748 . T C 132.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:160,12,0 chr1 22177348 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22187577 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 22187743 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22205413 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 22208258 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 22210150 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22222326 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 22223557 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 22224465 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 22225948 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 22230986 . A G 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr1 22244933 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 22244969 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 22244988 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.50;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 22244992 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.91;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 22247933 . G A 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr1 22266456 . A G 832.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.315;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.14;ReadPosRankSum=-0.197;SOR=0.655 GT:AD:DP:GQ:PL 0/1:28,27:55:99:861,0,904 chr1 22288153 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 22297049 . C T 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 22297370 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22298064 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22311557 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22378923 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22406451 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 22406483 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22410544 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22411390 . A G 55.14 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.38;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 22418606 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 22489740 . C T 199.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.776;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.49;ReadPosRankSum=-0.809;SOR=0.495 GT:AD:DP:GQ:PL 0/1:9,7:16:99:228,0,328 chr1 22489769 . T C 275.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.241;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.21;ReadPosRankSum=0.705;SOR=0.984 GT:AD:DP:GQ:PL 0/1:17,10:27:99:304,0,547 chr1 22501438 . C T 909.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.737;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=1.907;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.83;ReadPosRankSum=0.158;SOR=1.032 GT:AD:DP:GQ:PL 0/1:49,35:84:99:938,0,1236 chr1 22506250 . A T 365.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.399;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=3.493;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.92;ReadPosRankSum=1.150;SOR=1.569 GT:AD:DP:GQ:PL 0/1:27,14:41:99:394,0,750 chr1 22509184 . A G 1386.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.949;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.27;ReadPosRankSum=1.704;SOR=0.730 GT:AD:DP:GQ:PL 0/1:65,58:123:99:1415,0,1833 chr1 22511356 . C T 787.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.254;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.20;ReadPosRankSum=-0.032;SOR=0.871 GT:AD:DP:GQ:PL 0/1:15,24:39:99:816,0,474 chr1 22519959 . C G 891.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.107;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.455;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.51;ReadPosRankSum=-0.354;SOR=0.352 GT:AD:DP:GQ:PL 0/1:24,30:54:99:920,0,759 chr1 22520216 . G A 5111.77 PASS AC=2;AF=1.00;AN=2;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.19;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,154:154:99:5140,462,0 chr1 22522479 . A C 1077.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.078;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=3.854;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.67;ReadPosRankSum=0.093;SOR=0.399 GT:AD:DP:GQ:PL 0/1:55,46:101:99:1106,0,1482 chr1 22565472 . C T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 22580989 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 22581378 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22586326 . T C 203.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.47;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:232,24,0 chr1 22586421 . C T 408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.772;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.35;ReadPosRankSum=-0.720;SOR=0.793 GT:AD:DP:GQ:PL 0/1:22,14:36:99:437,0,640 chr1 22591161 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 22593411 . C T 4405.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.378;ClippingRankSum=0.000;DP=326;ExcessHet=3.0103;FS=0.410;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.51;ReadPosRankSum=1.417;SOR=0.745 GT:AD:DP:GQ:PL 0/1:158,168:326:99:4434,0,4485 chr1 22595533 . T G 146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=-0.191;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:175,0,215 chr1 22595919 . G A 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.253;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 22596053 . G A 698.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.768;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=-0.586;SOR=0.629 GT:AD:DP:GQ:PL 0/1:25,27:52:99:727,0,681 chr1 22596067 . G A 768.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.705;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=1.022;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.03;ReadPosRankSum=1.311;SOR=0.869 GT:AD:DP:GQ:PL 0/1:32,27:59:99:797,0,819 chr1 22597971 . T C 1344.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.628;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.45;ReadPosRankSum=-0.506;SOR=0.675 GT:AD:DP:GQ:PL 0/1:63,45:108:99:1373,0,2062 chr1 22598290 . C T 1460.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.119;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=5.275;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.32;ReadPosRankSum=2.121;SOR=0.331 GT:AD:DP:GQ:PL 0/1:46,56:102:99:1489,0,1160 chr1 22599922 . G A 43.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:71,6,0 chr1 22600067 . T C 84.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.150;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=6.021;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.21;ReadPosRankSum=1.150;SOR=2.788 GT:AD:DP:GQ:PL 0/1:1,3:4:18:113,0,18 chr1 22600821 . A G 2656.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.664;ClippingRankSum=0.000;DP=193;ExcessHet=3.0103;FS=5.267;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.77;ReadPosRankSum=-1.421;SOR=0.409 GT:AD:DP:GQ:PL 0/1:99,94:193:99:2685,0,2693 chr1 22600833 . T G 2575.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.583;ClippingRankSum=0.000;DP=198;ExcessHet=3.0103;FS=3.290;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.01;ReadPosRankSum=0.279;SOR=0.503 GT:AD:DP:GQ:PL 0/1:103,95:198:99:2604,0,2809 chr1 22601179 . G A 1449.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.968;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.79;ReadPosRankSum=1.085;SOR=0.683 GT:AD:DP:GQ:PL 0/1:67,56:123:99:1478,0,1962 chr1 22601772 . A G 1402.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.362;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=2.673;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.17;ReadPosRankSum=1.706;SOR=0.472 GT:AD:DP:GQ:PL 0/1:42,57:99:99:1431,0,1014 chr1 22601856 . A G 554.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.464;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=3.114;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.90;ReadPosRankSum=-2.139;SOR=0.119 GT:AD:DP:GQ:PL 0/1:14,17:31:99:583,0,479 chr1 22602011 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 22633145 . C A 289.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.631;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.10;ReadPosRankSum=-0.229;SOR=1.781 GT:AD:DP:GQ:PL 0/1:9,9:18:99:318,0,275 chr1 22634725 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 22634730 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 22638945 . A G 3743.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.254;ClippingRankSum=0.000;DP=236;ExcessHet=3.0103;FS=0.488;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.93;ReadPosRankSum=0.511;SOR=0.636 GT:AD:DP:GQ:PL 0/1:112,123:235:99:3772,0,3478 chr1 22644149 . C T 740.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.492;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=2.281;SOR=0.722 GT:AD:DP:GQ:PL 0/1:25,30:55:99:769,0,760 chr1 22644335 . G T 427.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.496;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=1.820;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.45;ReadPosRankSum=0.381;SOR=0.264 GT:AD:DP:GQ:PL 0/1:11,15:26:99:456,0,335 chr1 22644432 . T C 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.532;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.963;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.91;ReadPosRankSum=0.454;SOR=1.981 GT:AD:DP:GQ:PL 0/1:10,4:14:99:125,0,301 chr1 22647804 . C A 629.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.482;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=10.118;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.31;ReadPosRankSum=-0.826;SOR=0.058 GT:AD:DP:GQ:PL 0/1:21,23:44:99:658,0,706 chr1 22661465 . A G 3571.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.728 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3600,306,0 chr1 22677526 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22691017 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 22691071 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 22709747 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22714174 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 22754554 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22754709 . C T 114.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:143,15,0 chr1 22755173 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22765103 . A C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 22775195 . T G 4986.77 PASS AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.92;SOR=1.794 GT:AD:DP:GQ:PL 1/1:0,147:147:99:5015,442,0 chr1 22781032 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22781596 . A G 1200.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.29;SOR=3.545 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1229,96,0 chr1 22787688 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22805044 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 22805045 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 22805046 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 22812633 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 22812675 . G A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 22818328 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22820391 . T C 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 22821048 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 22826181 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 22826202 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 22826780 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 22826790 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 22836912 . A G 94.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0 chr1 22865253 . G T 3042.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.818;ClippingRankSum=0.000;DP=222;ExcessHet=3.0103;FS=0.570;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.71;ReadPosRankSum=0.226;SOR=0.743 GT:AD:DP:GQ:PL 0/1:117,105:222:99:3071,0,3378 chr1 22872909 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22876391 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22876473 . T C 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 22878528 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 22878620 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 22878757 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22879608 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 22882227 . C G 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.29;ReadPosRankSum=1.182;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,7:13:99:253,0,211 chr1 22882432 . G A 2569.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.904;ClippingRankSum=0.000;DP=232;ExcessHet=3.0103;FS=1.028;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.08;ReadPosRankSum=0.003;SOR=0.609 GT:AD:DP:GQ:PL 0/1:124,108:232:99:2598,0,3368 chr1 22882785 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 22890219 . T C 2274.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.148;ClippingRankSum=0.000;DP=192;ExcessHet=3.0103;FS=0.531;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.85;ReadPosRankSum=-0.473;SOR=0.633 GT:AD:DP:GQ:PL 0/1:104,88:192:99:2303,0,2669 chr1 22892694 . C T 779.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.601;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=7.734;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.22;ReadPosRankSum=-0.355;SOR=0.134 GT:AD:DP:GQ:PL 0/1:31,28:59:99:808,0,1010 chr1 22893000 . T C 11701.77 PASS AC=2;AF=1.00;AN=2;DP=355;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.96;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,355:355:99:11730,1065,0 chr1 22896623 . C T 1172.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.468;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.914;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.64;ReadPosRankSum=1.096;SOR=0.579 GT:AD:DP:GQ:PL 0/1:45,41:86:99:1201,0,1314 chr1 22905907 . C T 1480.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.818;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.42;ReadPosRankSum=-0.074;SOR=0.512 GT:AD:DP:GQ:PL 0/1:47,49:96:99:1509,0,1573 chr1 22906376 . G C 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=0.812;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,224 chr1 22907107 . A G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.30;ReadPosRankSum=-0.379;SOR=0.368 GT:AD:DP:GQ:PL 0/1:15,4:19:99:110,0,569 chr1 22910333 . C T 2729.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.726;ClippingRankSum=0.000;DP=188;ExcessHet=3.0103;FS=6.602;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.52;ReadPosRankSum=0.302;SOR=1.143 GT:AD:DP:GQ:PL 0/1:100,88:188:99:2758,0,2896 chr1 22940433 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 22953583 . G A 671.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.984;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=9.596;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.79;ReadPosRankSum=1.105;SOR=1.741 GT:AD:DP:GQ:PL 0/1:16,24:40:99:700,0,458 chr1 22953931 . G T 1320.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.093;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.19;ReadPosRankSum=0.222;SOR=0.715 GT:AD:DP:GQ:PL 0/1:69,49:118:99:1349,0,1936 chr1 22959185 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.40;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 22959709 . C A 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.97;ReadPosRankSum=0.366;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:63:63,0,156 chr1 22959731 . T C 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.799;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.56;ReadPosRankSum=0.114;SOR=0.941 GT:AD:DP:GQ:PL 0/1:8,4:12:99:131,0,264 chr1 22960259 . T G 293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.713;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=6.628;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.77;ReadPosRankSum=0.031;SOR=0.064 GT:AD:DP:GQ:PL 0/1:12,11:23:99:322,0,420 chr1 22963075 . T C 615.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.719;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.39;ReadPosRankSum=-0.162;SOR=0.833 GT:AD:DP:GQ:PL 0/1:24,22:46:99:644,0,670 chr1 22965089 . G A 1056.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.858;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=5.990;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.01;ReadPosRankSum=-0.657;SOR=1.350 GT:AD:DP:GQ:PL 0/1:49,39:88:99:1085,0,1373 chr1 23004004 . G A 152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.987;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=0.289;SOR=1.445 GT:AD:DP:GQ:PL 0/1:6,6:12:99:181,0,146 chr1 23015869 . A G 1934.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.367;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.90;ReadPosRankSum=-1.468;SOR=0.748 GT:AD:DP:GQ:PL 0/1:69,81:150:99:1963,0,1641 chr1 23030371 . G A 87.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.312;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.75;ReadPosRankSum=-0.588;SOR=0.804 GT:AD:DP:GQ:PL 0/1:9,4:13:99:116,0,301 chr1 23053705 . A G 273.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.810;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=2.515;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.78;ReadPosRankSum=-0.521;SOR=0.191 GT:AD:DP:GQ:PL 0/1:16,12:28:99:302,0,551 chr1 23056236 . A G 181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.52;ReadPosRankSum=-1.117;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:210,0,176 chr1 23073439 . C T 823.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.212;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.17;ReadPosRankSum=0.230;SOR=0.686 GT:AD:DP:GQ:PL 0/1:45,36:81:99:852,0,1098 chr1 23079301 . A C 929.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.147;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=2.905;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.81;ReadPosRankSum=-0.730;SOR=0.816 GT:AD:DP:GQ:PL 0/1:50,36:86:99:958,0,1455 chr1 23081219 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 23089225 . T A 226.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.111;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.12;ReadPosRankSum=1.602;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,8:15:99:255,0,241 chr1 23091660 . C T 4591.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.175;ClippingRankSum=0.000;DP=381;ExcessHet=3.0103;FS=7.454;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=1.995;SOR=1.027 GT:AD:DP:GQ:PL 0/1:207,174:381:99:4620,0,5630 chr1 23092768 . G A 4686.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.858;ClippingRankSum=0.000;DP=306;ExcessHet=3.0103;FS=1.412;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.32;ReadPosRankSum=0.247;SOR=0.593 GT:AD:DP:GQ:PL 0/1:137,169:306:99:4715,0,3912 chr1 23092881 . G T 3772.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.301;ClippingRankSum=0.000;DP=188;ExcessHet=3.0103;FS=1.800;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.18;ReadPosRankSum=-1.127;SOR=0.591 GT:AD:DP:GQ:PL 0/1:88,99:187:99:3801,0,5047 chr1 23092890 . C T 3628.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.602;ClippingRankSum=0.000;DP=183;ExcessHet=3.0103;FS=5.245;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.94;ReadPosRankSum=-1.720;SOR=0.780 GT:AD:DP:GQ:PL 0/1:87,95:182:99:3657,0,5044 chr1 23093362 . T C 501.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.773;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.150;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.15;ReadPosRankSum=-0.596;SOR=0.507 GT:AD:DP:GQ:PL 0/1:27,18:45:99:530,0,751 chr1 23105284 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 23142726 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 23192984 . C T 309.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.181;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.08;ReadPosRankSum=0.825;SOR=0.593 GT:AD:DP:GQ:PL 0/1:10,12:22:99:338,0,257 chr1 23194304 . T C 235.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.209;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.23;ReadPosRankSum=-0.259;SOR=1.071 GT:AD:DP:GQ:PL 0/1:13,8:21:99:264,0,445 chr1 23213935 . C T 36.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=12.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:64,9,0 chr1 23213976 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 23217436 . T C 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr1 23225476 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 23225613 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 23251173 . T C 202.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.35;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:231,24,0 chr1 23295198 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 23338018 . T G 308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.75;ReadPosRankSum=-0.543;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,9:13:99:337,0,128 chr1 23343989 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 23343992 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 23344059 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 23362440 . A G 3614.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.287;ClippingRankSum=0.000;DP=277;ExcessHet=3.0103;FS=0.911;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=-1.347;SOR=0.755 GT:AD:DP:GQ:PL 0/1:142,134:276:99:3643,0,3796 chr1 23362590 . G A 3224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.330;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.84;ReadPosRankSum=0.398;SOR=0.705 GT:AD:DP:GQ:PL 0/1:107,126:233:99:3253,0,2817 chr1 23366674 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 23366892 . T C 1233.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.573;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=6.447;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.41;ReadPosRankSum=1.257;SOR=0.174 GT:AD:DP:GQ:PL 0/1:23,44:67:99:1262,0,688 chr1 23366929 . T C 955.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.474;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=20.538;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.11;ReadPosRankSum=0.936;SOR=2.708 GT:AD:DP:GQ:PL 0/1:53,33:86:99:984,0,1481 chr1 23369659 . G A 6100.77 PASS AC=2;AF=1.00;AN=2;DP=182;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.52;SOR=1.961 GT:AD:DP:GQ:PL 1/1:0,182:182:99:6129,546,0 chr1 23371124 . T C 284.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.426;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.49;ReadPosRankSum=2.137;SOR=0.498 GT:AD:DP:GQ:PL 0/1:23,15:38:99:313,0,571 chr1 23371627 . C G 1665.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.769;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=4.478;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.83;ReadPosRankSum=-0.096;SOR=0.320 GT:AD:DP:GQ:PL 0/1:37,62:99:99:1694,0,944 chr1 23374625 . C A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 23384312 . A G 5486.77 PASS AC=2;AF=1.00;AN=2;DP=176;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.17;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,176:176:99:5515,528,0 chr1 23387459 . T G 3223.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.23;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3252,291,0 chr1 23393692 . C T 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=-0.875;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:259,0,134 chr1 23393767 . T G 780.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.594;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=2.044;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.10;ReadPosRankSum=-0.881;SOR=1.352 GT:AD:DP:GQ:PL 0/1:14,23:37:99:809,0,405 chr1 23397690 . C T 1151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.564;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=2.741;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.38;ReadPosRankSum=-0.639;SOR=0.899 GT:AD:DP:GQ:PL 0/1:52,41:93:99:1180,0,1336 chr1 23408748 . G T 5651.77 PASS AC=2;AF=1.00;AN=2;DP=181;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.23;SOR=1.034 GT:AD:DP:GQ:PL 1/1:0,181:181:99:5680,542,0 chr1 23417088 . C G 2325.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.15;SOR=2.869 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2354,192,0 chr1 23424647 . G T 866.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.89;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,30:30:90:895,90,0 chr1 23427040 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 23429020 . T C 1883.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1912,174,0 chr1 23429223 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 23429662 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 23430202 . A G 821.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.87;SOR=2.215 GT:AD:DP:GQ:PL 1/1:0,25:25:75:850,75,0 chr1 23431641 . A G 5573.77 PASS AC=2;AF=1.00;AN=2;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=0.967 GT:AD:DP:GQ:PL 1/1:0,171:171:99:5602,513,0 chr1 23432007 . T A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.191;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.43;SOR=1.371 GT:AD:DP:GQ:PL 0/1:8,3:11:66:66,0,211 chr1 23433915 . A G 502.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.59;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:531,39,0 chr1 23436186 . A G 979.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.79;SOR=2.546 GT:AD:DP:GQ:PL 1/1:0,29:29:86:1008,86,0 chr1 23437656 . C G 1065.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.57;SOR=4.332 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1094,81,0 chr1 23438979 . A G 1662.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=2.059 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1691,135,0 chr1 23442866 . T C 1137.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.03;SOR=2.165 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1166,96,0 chr1 23476645 . A G 219.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.80;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:248,18,0 chr1 23478424 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 23483867 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 23484165 . G A 539.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.74;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,16:16:48:568,48,0 chr1 23484568 . C T 252.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.28;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:30:281,30,0 chr1 23497749 . A C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 23509872 . A G 1794.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.893;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=4.163;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.64;ReadPosRankSum=-0.176;SOR=0.426 GT:AD:DP:GQ:PL 0/1:70,72:142:99:1823,0,2053 chr1 23520972 . C A 1969.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.029;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=5.233;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.81;ReadPosRankSum=-0.162;SOR=0.726 GT:AD:DP:GQ:PL 0/1:65,68:133:99:1998,0,1792 chr1 23521217 . C G 773.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.337;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.38;ReadPosRankSum=-1.251;SOR=0.636 GT:AD:DP:GQ:PL 0/1:39,29:68:99:802,0,1050 chr1 23525295 . G A 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.385;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.63;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:58:74,0,58 chr1 23558739 . C G 807.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.747;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.19;ReadPosRankSum=0.481;SOR=0.820 GT:AD:DP:GQ:PL 0/1:20,27:47:99:836,0,551 chr1 23559007 . T C 9837.77 PASS AC=2;AF=1.00;AN=2;DP=298;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=0.946 GT:AD:DP:GQ:PL 1/1:0,298:298:99:9866,894,0 chr1 23559108 . T C 3012.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.034;ClippingRankSum=0.000;DP=222;ExcessHet=3.0103;FS=2.282;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.57;ReadPosRankSum=0.979;SOR=0.678 GT:AD:DP:GQ:PL 0/1:114,108:222:99:3041,0,3364 chr1 23559576 . C A 312.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.64;ReadPosRankSum=1.783;SOR=0.527 GT:AD:DP:GQ:PL 0/1:11,9:20:99:341,0,814 chr1 23559582 . T C 277.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.43;ReadPosRankSum=2.305;SOR=0.512 GT:AD:DP:GQ:PL 0/1:10,8:18:99:306,0,781 chr1 23585271 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 23587573 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 23624624 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 23639027 . G A 702.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.007;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=1.778;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.34;ReadPosRankSum=0.358;SOR=1.154 GT:AD:DP:GQ:PL 0/1:21,22:43:99:731,0,643 chr1 23639214 . A C 2179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.012;ClippingRankSum=0.000;DP=172;ExcessHet=3.0103;FS=5.488;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.67;ReadPosRankSum=0.498;SOR=1.101 GT:AD:DP:GQ:PL 0/1:90,82:172:99:2208,0,2481 chr1 23639339 . C T 866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.422;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=10.572;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=0.641;SOR=2.170 GT:AD:DP:GQ:PL 0/1:48,28:76:99:895,0,1382 chr1 23640347 . C T 690.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.290;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=2.273;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.79;ReadPosRankSum=0.122;SOR=1.040 GT:AD:DP:GQ:PL 0/1:28,26:54:99:719,0,769 chr1 23642253 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 23644160 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 23657119 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 23659360 . C T 61.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:89,9,0 chr1 23677609 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 23691787 . C G 4532.77 PASS AC=2;AF=1.00;AN=2;DP=139;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.61;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,139:139:99:4561,417,0 chr1 23695947 . A G 6718.77 PASS AC=2;AF=1.00;AN=2;DP=218;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.82;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,218:218:99:6747,653,0 chr1 23757004 . C T 667.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.203;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=1.289;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=1.642;SOR=0.412 GT:AD:DP:GQ:PL 0/1:25,26:51:99:696,0,743 chr1 23766620 . A C 46.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:74,6,0 chr1 23795111 . C T 242.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=5.898;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.56;ReadPosRankSum=1.743;SOR=2.461 GT:AD:DP:GQ:PL 0/1:13,8:21:99:271,0,480 chr1 23802636 . A G 1607.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.818;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=0.723;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=-0.662;SOR=0.785 GT:AD:DP:GQ:PL 0/1:66,60:126:99:1636,0,1935 chr1 23807972 . C T 568.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.858;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.36;ReadPosRankSum=0.971;SOR=0.789 GT:AD:DP:GQ:PL 0/1:27,19:46:99:597,0,943 chr1 23808231 . T C 4098.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.344;ClippingRankSum=0.000;DP=358;ExcessHet=3.0103;FS=9.508;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.45;ReadPosRankSum=0.498;SOR=0.601 GT:AD:DP:GQ:PL 0/1:194,164:358:99:4127,0,5619 chr1 23817442 . A G 1402.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.550;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.22;ReadPosRankSum=1.037;SOR=0.702 GT:AD:DP:GQ:PL 0/1:65,60:125:99:1431,0,1727 chr1 23825506 . C A 3345.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=2.628;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=21.207;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=34.14;ReadPosRankSum=-0.718;SOR=4.842 GT:AD:DP:GQ:PL 1/1:2,96:98:99:3374,268,0 chr1 23826741 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 23853505 . C T 41.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.86;QD=20.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:69,6,0 chr1 23854123 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.47;QD=27.03;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 23854133 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.47;QD=27.23;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 23854472 . T C 1697.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.326;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=0.381;SOR=0.744 GT:AD:DP:GQ:PL 0/1:78,78:156:99:1726,0,1971 chr1 23854687 . C T 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.020;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=-1.949;SOR=1.402 GT:AD:DP:GQ:PL 0/1:8,6:14:99:208,0,258 chr1 23865230 . A G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 23865710 . A G 3137.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.11;SOR=1.559 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3166,276,0 chr1 23865889 . G C 345.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.151;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=2.884;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.34;ReadPosRankSum=0.437;SOR=0.204 GT:AD:DP:GQ:PL 0/1:6,11:17:99:374,0,187 chr1 23865963 . T C 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.589;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-0.241;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,170 chr1 23868258 . G C 1644.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.471;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=5.894;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.58;ReadPosRankSum=-0.550;SOR=1.571 GT:AD:DP:GQ:PL 0/1:38,46:84:99:1673,0,1308 chr1 23868283 . G A 1152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.024;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=1.840;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.59;ReadPosRankSum=-0.647;SOR=1.280 GT:AD:DP:GQ:PL 0/1:26,30:56:99:1181,0,1001 chr1 23868298 . A G 949.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.406;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.59;ReadPosRankSum=-0.095;SOR=0.793 GT:AD:DP:GQ:PL 0/1:21,23:44:99:978,0,855 chr1 23868372 . A C 265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.15;ReadPosRankSum=0.084;SOR=1.445 GT:AD:DP:GQ:PL 0/1:4,8:12:99:294,0,99 chr1 23868408 . C A 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=0.000;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr1 23874672 . G A 8313.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.413;ClippingRankSum=0.000;DP=561;ExcessHet=3.0103;FS=1.746;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.82;ReadPosRankSum=0.017;SOR=0.563 GT:AD:DP:GQ:PL 0/1:252,309:561:99:8342,0,6810 chr1 23882888 . T C 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 23890598 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 23890602 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 23892470 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 23899020 . T C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.10;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 23899040 . T C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 23900856 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 23900866 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 23901444 . C T 203.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.656;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=6.043;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.19;ReadPosRankSum=-0.098;SOR=2.833 GT:AD:DP:GQ:PL 0/1:13,7:20:99:232,0,415 chr1 23901618 . G A 3575.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.74;SOR=1.540 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3604,301,0 chr1 23901642 . G A 4455.77 PASS AC=2;AF=1.00;AN=2;DP=130;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.28;SOR=1.665 GT:AD:DP:GQ:PL 1/1:0,130:130:99:4484,390,0 chr1 23901716 . A G 6609.77 PASS AC=2;AF=1.00;AN=2;DP=191;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.61;SOR=1.277 GT:AD:DP:GQ:PL 1/1:0,191:191:99:6638,572,0 chr1 23901869 . A G 6992.77 PASS AC=2;AF=1.00;AN=2;DP=211;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.14;SOR=1.416 GT:AD:DP:GQ:PL 1/1:0,211:211:99:7021,634,0 chr1 23901918 . C T 6366.77 PASS AC=2;AF=1.00;AN=2;DP=146;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.95;SOR=1.778 GT:AD:DP:GQ:PL 1/1:0,146:146:99:6395,439,0 chr1 23901929 . T C 5735.77 PASS AC=2;AF=1.00;AN=2;DP=127;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.76;SOR=1.845 GT:AD:DP:GQ:PL 1/1:0,127:127:99:5764,388,0 chr1 23901953 . G A 4314.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.77;SOR=2.184 GT:AD:DP:GQ:PL 1/1:0,97:97:99:4343,295,0 chr1 23902104 . C G 993.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.06;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1022,93,0 chr1 23902128 . C T 430.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.692;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=1.414;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.05;ReadPosRankSum=0.724;SOR=0.368 GT:AD:DP:GQ:PL 0/1:15,18:33:99:459,0,460 chr1 23902272 . G C 1731.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.92;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1760,168,0 chr1 23902373 . G A 1290.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.10;SOR=1.552 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1319,117,0 chr1 23902542 . C A 2505.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.54;SOR=1.734 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2534,231,0 chr1 23902616 . A G 3373.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.67;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3402,330,0 chr1 23902786 . T C 1671.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.12;SOR=2.256 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1700,147,0 chr1 23902923 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 23905799 . C A 62.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:90,9,0 chr1 23919784 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 23920098 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 23920240 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 23920311 . C T 90.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.51;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:118,12,0 chr1 23920382 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 23922308 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 23941815 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 23949439 . C T 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.524;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr1 23959592 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 23960737 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 23961914 . A G 95.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.100;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=54.46;MQRankSum=-1.242;QD=11.97;ReadPosRankSum=0.366;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,6:8:59:124,0,59 chr1 23961942 . C T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.56;MQRankSum=-1.150;QD=21.19;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 23967759 . C T 2925.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.46;SOR=1.661 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2954,278,0 chr1 23967872 . A T 1859.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.016;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=2.501;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.06;ReadPosRankSum=-1.066;SOR=0.717 GT:AD:DP:GQ:PL 0/1:45,64:109:99:1888,0,1092 chr1 23967941 . C T 1496.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.103;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=2.908;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.20;ReadPosRankSum=1.585;SOR=1.064 GT:AD:DP:GQ:PL 0/1:35,52:87:99:1525,0,910 chr1 23968097 . G A 580.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.084;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=2.978;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.20;ReadPosRankSum=1.442;SOR=0.301 GT:AD:DP:GQ:PL 0/1:23,21:44:99:609,0,667 chr1 23968137 . C T 497.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.056;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.44;ReadPosRankSum=-1.048;SOR=0.446 GT:AD:DP:GQ:PL 0/1:10,17:27:99:526,0,336 chr1 23971773 . T C 536.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.220;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=9.401;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.77;ReadPosRankSum=-0.384;SOR=0.077 GT:AD:DP:GQ:PL 0/1:11,21:32:99:565,0,329 chr1 23972105 . T C 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=0.000;SOR=0.132 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,107 chr1 23974600 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 23975195 . C A 673.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.585;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.179;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.71;ReadPosRankSum=1.619;SOR=0.982 GT:AD:DP:GQ:PL 0/1:29,24:53:99:702,0,767 chr1 23975231 . T C 1023.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.60;SOR=4.255 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1052,78,0 chr1 23978907 . T C 439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.224;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=19.268;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.56;ReadPosRankSum=-1.204;SOR=4.543 GT:AD:DP:GQ:PL 0/1:21,14:35:99:468,0,499 chr1 23980028 . G A 229.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.98;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,7:10:95:258,0,95 chr1 23980531 . C A 328.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.526;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.44;ReadPosRankSum=0.047;SOR=1.765 GT:AD:DP:GQ:PL 0/1:10,10:20:99:357,0,319 chr1 23983816 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 23983826 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 24013988 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 24022567 . G A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 24032746 . T C 136.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=34.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:164,12,0 chr1 24033852 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 24033875 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 24055808 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 24057329 . T C 1526.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.553;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=3.461;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.74;ReadPosRankSum=-0.307;SOR=0.351 GT:AD:DP:GQ:PL 0/1:43,54:97:99:1555,0,1285 chr1 24059401 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 24061881 . T C 5437.77 PASS AC=2;AF=1.00;AN=2;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=1.845 GT:AD:DP:GQ:PL 1/1:0,170:170:99:5466,509,0 chr1 24064241 . C T 2098.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.635;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=6.348;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.28;ReadPosRankSum=0.441;SOR=1.203 GT:AD:DP:GQ:PL 0/1:73,74:147:99:2127,0,1916 chr1 24066792 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 24067166 . G A 2785.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.475;ClippingRankSum=0.000;DP=241;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.56;ReadPosRankSum=0.437;SOR=0.673 GT:AD:DP:GQ:PL 0/1:128,113:241:99:2814,0,3347 chr1 24067239 . G A 1775.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.218;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.00;ReadPosRankSum=0.635;SOR=0.585 GT:AD:DP:GQ:PL 0/1:54,57:111:99:1804,0,1714 chr1 24068513 . T G 306.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.039;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.17;ReadPosRankSum=-0.187;SOR=1.329 GT:AD:DP:GQ:PL 0/1:6,10:16:99:335,0,202 chr1 24073567 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 24073940 . A T 365.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.25;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:394,33,0 chr1 24074094 . G C 5445.77 PASS AC=2;AF=1.00;AN=2;DP=160;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.04;SOR=2.103 GT:AD:DP:GQ:PL 1/1:0,160:160:99:5474,480,0 chr1 24074143 . C G 7573.77 PASS AC=2;AF=1.00;AN=2;DP=232;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.65;SOR=1.296 GT:AD:DP:GQ:PL 1/1:0,232:232:99:7602,696,0 chr1 24080157 . G A 4307.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.238;ClippingRankSum=0.000;DP=305;ExcessHet=3.0103;FS=3.216;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.17;ReadPosRankSum=-0.286;SOR=0.528 GT:AD:DP:GQ:PL 0/1:146,158:304:99:4336,0,3981 chr1 24080395 . C G 331.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:360,27,0 chr1 24081525 . C G 915.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.023;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=1.817;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.54;ReadPosRankSum=-0.795;SOR=0.960 GT:AD:DP:GQ:PL 0/1:59,37:96:99:944,0,1579 chr1 24082275 . T C 841.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.635;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=1.217;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.51;ReadPosRankSum=1.153;SOR=0.510 GT:AD:DP:GQ:PL 0/1:27,31:58:99:870,0,877 chr1 24082701 . C T 1621.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.156;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=1.352;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.67;ReadPosRankSum=0.174;SOR=0.835 GT:AD:DP:GQ:PL 0/1:75,64:139:99:1650,0,2000 chr1 24084261 . T C 1677.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.985;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=2.639;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.45;ReadPosRankSum=-2.601;SOR=0.435 GT:AD:DP:GQ:PL 0/1:42,60:102:99:1706,0,1024 chr1 24086395 . A T 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr1 24086669 . T C 2801.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.969;ClippingRankSum=0.000;DP=218;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.91;ReadPosRankSum=-0.631;SOR=0.698 GT:AD:DP:GQ:PL 0/1:115,102:217:99:2830,0,2945 chr1 24086937 . T G 391.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.627;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=2.684;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.56;ReadPosRankSum=0.649;SOR=0.195 GT:AD:DP:GQ:PL 0/1:28,13:41:99:420,0,953 chr1 24087041 . C T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-1.036;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr1 24089569 . T C 8583.77 PASS AC=2;AF=1.00;AN=2;DP=226;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.07;SOR=1.729 GT:AD:DP:GQ:PL 1/1:0,225:225:99:8612,682,0 chr1 24089580 . G C 3292.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.655;ClippingRankSum=0.000;DP=248;ExcessHet=3.0103;FS=2.274;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.33;ReadPosRankSum=-0.151;SOR=0.861 GT:AD:DP:GQ:PL 0/1:120,127:247:99:3321,0,3013 chr1 24090138 . T C 3288.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.159;ClippingRankSum=0.000;DP=310;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.678;SOR=0.668 GT:AD:DP:GQ:PL 0/1:153,151:304:99:3317,0,3211 chr1 24090317 . C T 591.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.13;ReadPosRankSum=-0.738;SOR=1.220 GT:AD:DP:GQ:PL 0/1:11,17:28:99:620,0,375 chr1 24092278 . T C 1115.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.622;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=6.756;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.49;ReadPosRankSum=-0.723;SOR=0.250 GT:AD:DP:GQ:PL 0/1:35,42:77:99:1144,0,1092 chr1 24092812 . A G 373.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.67;ReadPosRankSum=-1.173;SOR=1.022 GT:AD:DP:GQ:PL 0/1:8,11:19:99:402,0,277 chr1 24093006 . A G 3897.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.220;ClippingRankSum=0.000;DP=319;ExcessHet=3.0103;FS=3.669;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.22;ReadPosRankSum=0.255;SOR=0.890 GT:AD:DP:GQ:PL 0/1:171,148:319:99:3926,0,4411 chr1 24094844 . G T 3157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.972;ClippingRankSum=0.000;DP=218;ExcessHet=3.0103;FS=1.140;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.49;ReadPosRankSum=-0.688;SOR=0.821 GT:AD:DP:GQ:PL 0/1:106,112:218:99:3186,0,2749 chr1 24094984 . G A 4370.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.531;ClippingRankSum=0.000;DP=314;ExcessHet=3.0103;FS=0.868;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.05;ReadPosRankSum=1.541;SOR=0.642 GT:AD:DP:GQ:PL 0/1:138,173:311:99:4399,0,3727 chr1 24095153 . T C 811.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.060;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.61;ReadPosRankSum=0.000;SOR=0.970 GT:AD:DP:GQ:PL 0/1:27,25:52:99:840,0,869 chr1 24095314 . A G 471.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.984;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.59;ReadPosRankSum=-0.513;SOR=0.257 GT:AD:DP:GQ:PL 0/1:5,15:20:99:500,0,149 chr1 24095385 . C T 1074.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.752;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.79;ReadPosRankSum=-1.496;SOR=0.646 GT:AD:DP:GQ:PL 0/1:27,37:64:99:1103,0,793 chr1 24095460 . C G 2485.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.832;ClippingRankSum=0.000;DP=178;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.96;ReadPosRankSum=0.451;SOR=0.739 GT:AD:DP:GQ:PL 0/1:82,96:178:99:2514,0,1998 chr1 24097751 . T C 589.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.471;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.87;ReadPosRankSum=0.463;SOR=0.892 GT:AD:DP:GQ:PL 0/1:15,18:33:99:618,0,515 chr1 24106320 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.53;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 24107066 . C A 381.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.992;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=3.155;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=-0.891;SOR=0.307 GT:AD:DP:GQ:PL 0/1:14,16:30:99:410,0,358 chr1 24108944 . C A 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.368;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=0.566;SOR=0.086 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,134 chr1 24120626 . C T 555.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.738;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=2.955;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.23;ReadPosRankSum=-0.734;SOR=1.802 GT:AD:DP:GQ:PL 0/1:25,17:42:99:584,0,849 chr1 24121594 . G A 1581.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.429;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.46;ReadPosRankSum=0.876;SOR=0.649 GT:AD:DP:GQ:PL 0/1:74,64:138:99:1610,0,1866 chr1 24121881 . T C 201.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=28.83;ReadPosRankSum=0.792;SOR=2.584 GT:AD:DP:GQ:PL 0/1:1,6:7:21:230,0,21 chr1 24123771 . G A 155.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.795;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=1.585;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.37;ReadPosRankSum=-2.424;SOR=1.140 GT:AD:DP:GQ:PL 0/1:20,9:29:99:184,0,476 chr1 24134307 . T G 2909.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.255;ClippingRankSum=0.000;DP=216;ExcessHet=3.0103;FS=5.629;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=-0.497;SOR=0.430 GT:AD:DP:GQ:PL 0/1:113,103:216:99:2938,0,2893 chr1 24134566 . G A 349.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.91;ReadPosRankSum=-1.135;SOR=2.147 GT:AD:DP:GQ:PL 0/1:3,10:13:86:378,0,86 chr1 24136914 . G T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 24138623 . C T 2988.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.180;ClippingRankSum=0.000;DP=237;ExcessHet=3.0103;FS=2.232;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.66;ReadPosRankSum=0.658;SOR=0.546 GT:AD:DP:GQ:PL 0/1:120,116:236:99:3017,0,3306 chr1 24138819 . C T 221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.384;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.92;ReadPosRankSum=-0.433;SOR=1.105 GT:AD:DP:GQ:PL 0/1:20,8:28:99:250,0,682 chr1 24143324 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 24148033 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 24148687 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 24148762 . G A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 24150637 . C T 114.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:143,15,0 chr1 24153409 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 24156965 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 24157001 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 24157951 . A G 3521.77 PASS AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.86;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,104:104:99:3550,312,0 chr1 24159028 . T C 2918.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.55;SOR=3.042 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2947,240,0 chr1 24159323 . T C 2385.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.77;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2414,181,0 chr1 24159451 . T C 6336.77 PASS AC=2;AF=1.00;AN=2;DP=191;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.35;SOR=1.647 GT:AD:DP:GQ:PL 1/1:0,190:190:99:6365,570,0 chr1 24161270 . T C 1331.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=2.247 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1360,123,0 chr1 24166721 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 24167209 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 24167224 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 24169232 . G A 238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.866;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-1.882;SOR=0.275 GT:AD:DP:GQ:PL 0/1:16,9:25:99:267,0,593 chr1 24180943 . A G 649.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.408;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.41;ReadPosRankSum=0.472;SOR=0.582 GT:AD:DP:GQ:PL 0/1:12,17:29:99:678,0,726 chr1 24180947 . G A 652.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.761;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.18;ReadPosRankSum=-0.667;SOR=0.760 GT:AD:DP:GQ:PL 0/1:10,17:27:99:681,0,692 chr1 24187123 . C A 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=0.180;SOR=0.148 GT:AD:DP:GQ:PL 0/1:4,4:8:99:109,0,143 chr1 24187278 . G A 246.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.060;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.42;ReadPosRankSum=-1.912;SOR=0.892 GT:AD:DP:GQ:PL 0/1:6,10:16:99:275,0,152 chr1 24201549 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.05;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 24201605 . T G 111.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.51;QD=22.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:140,15,0 chr1 24211124 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 24284574 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 24285308 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 24292678 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 24293941 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 24297800 . G A 125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.97;ReadPosRankSum=-0.366;SOR=0.180 GT:AD:DP:GQ:PL 0/1:2,5:7:62:154,0,62 chr1 24298119 . C A 125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.210;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.48;ReadPosRankSum=-0.013;SOR=0.631 GT:AD:DP:GQ:PL 0/1:5,7:12:99:154,0,105 chr1 24298444 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 24342352 . T C 2716.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.05;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2745,222,0 chr1 24346757 . G A 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=1.119;SOR=0.495 GT:AD:DP:GQ:PL 0/1:9,7:16:99:244,0,328 chr1 24346792 . G C 197.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.72;ReadPosRankSum=0.000;SOR=1.863 GT:AD:DP:GQ:PL 0/1:2,6:8:59:226,0,59 chr1 24347376 . A G 5372.77 PASS AC=2;AF=1.00;AN=2;DP=157;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.22;SOR=1.951 GT:AD:DP:GQ:PL 1/1:0,157:157:99:5401,471,0 chr1 24351335 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 24354121 . C T 202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.549;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.53;ReadPosRankSum=1.150;SOR=0.859 GT:AD:DP:GQ:PL 0/1:2,7:9:56:231,0,56 chr1 24354175 . C T 129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.037;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.63;ReadPosRankSum=1.295;SOR=0.693 GT:AD:DP:GQ:PL 0/1:12,5:17:99:158,0,416 chr1 24354425 . C T 1675.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.309;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=-0.281;SOR=0.706 GT:AD:DP:GQ:PL 0/1:57,68:125:99:1704,0,1394 chr1 24357626 . G A 1064.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.318;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=8.139;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.24;ReadPosRankSum=-0.166;SOR=1.519 GT:AD:DP:GQ:PL 0/1:63,41:104:99:1093,0,1705 chr1 24358238 . G A 2157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.229;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=2.296;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.22;ReadPosRankSum=1.250;SOR=0.500 GT:AD:DP:GQ:PL 0/1:59,74:133:99:2186,0,1768 chr1 24361163 . T C 1405.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.02;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1434,111,0 chr1 24361288 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 24363924 . A G 488.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.91;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:517,42,0 chr1 24367937 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 24369259 . C G 4940.77 PASS AC=2;AF=1.00;AN=2;DP=153;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.51;SOR=1.056 GT:AD:DP:GQ:PL 1/1:0,152:152:99:4969,456,0 chr1 24379623 . G A 1134.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.50;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1163,96,0 chr1 24379779 . A G 3879.77 PASS AC=2;AF=1.00;AN=2;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.54;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3908,369,0 chr1 24379802 . T C 3772.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.18;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3801,363,0 chr1 24379920 . T C 1516.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.28;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1545,129,0 chr1 24379971 . A G 856.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.01;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:60:885,60,0 chr1 24383915 . A G 1201.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.540;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=5.835;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.85;ReadPosRankSum=0.483;SOR=1.270 GT:AD:DP:GQ:PL 0/1:74,48:122:99:1230,0,1909 chr1 24391549 . C A 1374.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.664;ClippingRankSum=0.000;DP=130;ExcessHet=3.0103;FS=6.789;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.58;ReadPosRankSum=0.934;SOR=0.535 GT:AD:DP:GQ:PL 0/1:77,53:130:99:1403,0,2015 chr1 24391585 . T C 1296.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.136;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=10.682;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.48;ReadPosRankSum=-0.743;SOR=0.383 GT:AD:DP:GQ:PL 0/1:63,50:113:99:1325,0,1774 chr1 24401188 . C T 664.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.946;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.286;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.21;ReadPosRankSum=-0.017;SOR=0.495 GT:AD:DP:GQ:PL 0/1:19,22:41:99:693,0,473 chr1 24413622 . C A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 24419715 . C T 2417.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.038;ClippingRankSum=0.000;DP=205;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.79;ReadPosRankSum=-1.898;SOR=0.667 GT:AD:DP:GQ:PL 0/1:101,104:205:99:2446,0,2607 chr1 24419943 . G A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.150;SOR=2.093 GT:AD:DP:GQ:PL 0/1:3,3:6:73:107,0,73 chr1 24420977 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.29;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,2:6:72:72,0,180 chr1 24420985 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.29;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,2:6:72:72,0,180 chr1 24436679 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 24436791 . G A 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.94;ReadPosRankSum=-0.674;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:33:112,0,33 chr1 24436795 . A G 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.94;ReadPosRankSum=0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:33:112,0,33 chr1 24436841 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 24441979 . G A 721.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.592;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=5.845;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.04;ReadPosRankSum=-2.651;SOR=1.863 GT:AD:DP:GQ:PL 0/1:26,22:48:99:750,0,771 chr1 24442288 . G C 1452.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.59;SOR=1.556 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1481,126,0 chr1 24442844 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 24447313 . T A 33.41 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=11.14;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:8:61,8,0 chr1 24453365 . T C 1173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.866;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=1.710;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.30;ReadPosRankSum=-1.072;SOR=1.329 GT:AD:DP:GQ:PL 0/1:37,35:72:99:1202,0,1467 chr1 24453383 . C T 1474.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.073;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=3.839;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.69;ReadPosRankSum=0.901;SOR=0.312 GT:AD:DP:GQ:PL 0/1:46,48:94:99:1503,0,1736 chr1 24457649 . A G 970.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.753;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=3.728;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.45;ReadPosRankSum=1.116;SOR=1.730 GT:AD:DP:GQ:PL 0/1:30,29:59:99:999,0,956 chr1 24457707 . T C 1516.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.096;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=0.721;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=-0.249;SOR=0.578 GT:AD:DP:GQ:PL 0/1:60,58:118:99:1545,0,1626 chr1 24457724 . G A 1820.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.532;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=2.166;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=-0.075;SOR=0.526 GT:AD:DP:GQ:PL 0/1:66,73:139:99:1849,0,1677 chr1 24458579 . G A 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr1 24458903 . C T 3475.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.764;ClippingRankSum=0.000;DP=248;ExcessHet=3.0103;FS=2.141;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.02;ReadPosRankSum=-0.564;SOR=0.561 GT:AD:DP:GQ:PL 0/1:119,129:248:99:3504,0,3089 chr1 24466127 . T A 3791.77 PASS AC=2;AF=1.00;AN=2;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.26;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,108:108:99:3820,324,0 chr1 24466856 . G C 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr1 24490239 . T C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 24514278 . G A 542.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.909;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.92;ReadPosRankSum=1.040;SOR=0.641 GT:AD:DP:GQ:PL 0/1:20,19:39:99:571,0,646 chr1 24533127 . G A 572.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.491;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=3.727;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.09;ReadPosRankSum=-0.043;SOR=1.264 GT:AD:DP:GQ:PL 0/1:40,23:63:99:601,0,970 chr1 24533175 . G A 922.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.334;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=2.864;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.49;ReadPosRankSum=-1.937;SOR=1.075 GT:AD:DP:GQ:PL 0/1:49,39:88:99:951,0,1170 chr1 24535214 . G A 1516.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.949;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=2.420;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=-0.204;SOR=0.490 GT:AD:DP:GQ:PL 0/1:62,56:118:99:1545,0,1857 chr1 24592632 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 24595638 . G A 1441.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.292;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=-0.273;SOR=0.688 GT:AD:DP:GQ:PL 0/1:67,52:119:99:1470,0,2032 chr1 24601070 . T C 3610.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.903;ClippingRankSum=0.000;DP=291;ExcessHet=3.0103;FS=3.234;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.41;ReadPosRankSum=1.183;SOR=0.892 GT:AD:DP:GQ:PL 0/1:151,140:291:99:3639,0,3730 chr1 24601134 . C A 2322.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.599;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.98;ReadPosRankSum=-1.031;SOR=0.731 GT:AD:DP:GQ:PL 0/1:93,86:179:99:2351,0,2520 chr1 24601236 . C G 508.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.673;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=1.618;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.72;ReadPosRankSum=0.451;SOR=0.374 GT:AD:DP:GQ:PL 0/1:21,19:40:99:537,0,640 chr1 24662668 . T A 817.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.956;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.95;ReadPosRankSum=2.391;SOR=0.595 GT:AD:DP:GQ:PL 0/1:17,24:41:99:846,0,519 chr1 24663271 . G T 2714.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.50;SOR=1.481 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2743,267,0 chr1 24719242 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 24719374 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 24719392 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 24727198 . G A 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 24771754 . T C 1839.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.92;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1868,147,0 chr1 24771850 . C T 5918.77 PASS AC=2;AF=1.00;AN=2;DP=181;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.70;SOR=1.649 GT:AD:DP:GQ:PL 1/1:0,181:181:99:5947,543,0 chr1 24805711 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 24827201 . G A 1396.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.04;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1425,135,0 chr1 24839591 . G A 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=0.160;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr1 24855784 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 24886746 . C T 49.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:77,6,0 chr1 24897345 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 24897414 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 24897920 . A G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:74:81,0,74 chr1 24897921 . A G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:74:81,0,74 chr1 24907571 . T G 620.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.250;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.78;ReadPosRankSum=1.227;SOR=1.008 GT:AD:DP:GQ:PL 0/1:21,21:42:99:649,0,634 chr1 24914565 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 24914599 . A C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 24927826 . C T 521.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.189;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=3.029;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.10;ReadPosRankSum=0.336;SOR=0.268 GT:AD:DP:GQ:PL 0/1:17,20:37:99:550,0,439 chr1 24929953 . G A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,115 chr1 24931810 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 24935249 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 24964519 . A T 2411.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.739;ClippingRankSum=0.000;DP=190;ExcessHet=3.0103;FS=3.337;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.620;SOR=0.934 GT:AD:DP:GQ:PL 0/1:90,100:190:99:2440,0,2356 chr1 24967338 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 24967411 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 24974050 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 24977453 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 25001162 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 25023695 . G C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=1.036;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 25051953 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 25051988 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 25054297 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 25103248 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 25239714 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 25258485 . G A 184.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.602;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.447;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=0.517;SOR=1.863 GT:AD:DP:GQ:PL 0/1:8,7:15:99:213,0,187 chr1 25272426 . C A 64.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.864;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.94;MQRankSum=-3.346;QD=2.94;ReadPosRankSum=-3.364;SOR=0.818 GT:AD:DP:GQ:PL 0/1:17,5:22:93:93,0,600 chr1 25284544 . G C 6479.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.376;ClippingRankSum=0.000;DP=350;ExcessHet=3.0103;FS=0.440;MLEAC=1;MLEAF=0.500;MQ=57.69;MQRankSum=-5.051;QD=18.57;ReadPosRankSum=1.546;SOR=0.657 GT:AD:DP:GQ:PL 0/1:122,227:349:99:6508,0,3082 chr1 25290908 . T C 601.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.86;QD=26.21;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:630,42,0 chr1 25290915 . G A 601.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.86;QD=30.34;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:630,42,0 chr1 25301905 . T G 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.51;MQRankSum=-2.823;QD=9.68;ReadPosRankSum=-0.531;SOR=1.329 GT:AD:DP:GQ:PL 0/1:6,4:10:99:125,0,220 chr1 25307040 . G C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.674;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 25307714 . G A 3704.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.655;ClippingRankSum=0.000;DP=221;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.95;MQRankSum=1.452;QD=16.76;ReadPosRankSum=0.081;SOR=0.708 GT:AD:DP:GQ:PL 0/1:88,133:221:99:3733,0,2301 chr1 25321858 . T C 346.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.719;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.63;ReadPosRankSum=-1.668;SOR=0.612 GT:AD:DP:GQ:PL 0/1:22,14:36:99:375,0,528 chr1 25351747 . T A 2365.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.54;SOR=1.673 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2394,225,0 chr1 25390648 . C T 2200.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.787;ClippingRankSum=0.000;DP=130;ExcessHet=3.0103;FS=1.097;MLEAC=1;MLEAF=0.500;MQ=56.61;MQRankSum=-0.981;QD=16.93;ReadPosRankSum=0.533;SOR=0.894 GT:AD:DP:GQ:PL 0/1:64,66:130:99:2229,0,2098 chr1 25390874 . C G 6226.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.985;ClippingRankSum=0.000;DP=427;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.78;MQRankSum=0.983;QD=14.58;ReadPosRankSum=0.014;SOR=0.665 GT:AD:DP:GQ:PL 0/1:198,229:427:99:6255,0,5301 chr1 25402439 . G T 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.728;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.11;MQRankSum=-2.638;QD=6.68;ReadPosRankSum=0.308;SOR=0.836 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,228 chr1 25420739 . G C 770.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=5.182;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=17.559;MLEAC=1;MLEAF=0.500;MQ=47.67;MQRankSum=-9.054;QD=5.84;ReadPosRankSum=-1.132;SOR=2.327 GT:AD:DP:GQ:PL 0/1:99,33:132:99:799,0,2827 chr1 25420908 . G T 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.812;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.67;MQRankSum=-2.670;QD=8.56;ReadPosRankSum=-0.571;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:131,0,256 chr1 25439974 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.51;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:90,6,0 chr1 25439997 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 25454177 . C T 654.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.096;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=3.886;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.91;ReadPosRankSum=-0.600;SOR=0.327 GT:AD:DP:GQ:PL 0/1:32,28:60:99:683,0,884 chr1 25454402 . A G 357.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.643;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=3.132;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=0.124;SOR=2.147 GT:AD:DP:GQ:PL 0/1:13,10:23:99:386,0,755 chr1 25456575 . A G 139.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.691;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:168,0,215 chr1 25458960 . A G 543.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.359;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.48;ReadPosRankSum=-0.069;SOR=0.906 GT:AD:DP:GQ:PL 0/1:15,18:33:99:572,0,446 chr1 25491214 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 25533291 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 25543527 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 25566730 . G T 2279.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.63;SOR=4.066 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2308,174,0 chr1 25566751 . T C 3822.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.81;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,82:82:99:3851,259,0 chr1 25566752 . G A 3822.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.85;SOR=4.905 GT:AD:DP:GQ:PL 1/1:0,86:86:99:3851,259,0 chr1 25582314 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 25582383 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 25682759 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 25703927 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 25746952 . T C 251.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.53;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:280,21,0 chr1 25749571 . C G 703.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.99;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,20:20:60:732,60,0 chr1 25763581 . A G 2121.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.20;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2150,204,0 chr1 25771616 . G A 4879.77 PASS AC=2;AF=1.00;AN=2;DP=146;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.65;SOR=1.710 GT:AD:DP:GQ:PL 1/1:0,145:145:99:4908,438,0 chr1 25771842 . G A 3530.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.97;SOR=3.033 GT:AD:DP:GQ:PL 1/1:0,96:96:99:3559,289,0 chr1 25778482 . G A 632.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.09;ReadPosRankSum=0.113;SOR=1.143 GT:AD:DP:GQ:PL 0/1:12,18:30:99:661,0,404 chr1 25780830 . A C 902.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.25;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,24:24:72:931,72,0 chr1 25781197 . C A 12030.77 PASS AC=2;AF=1.00;AN=2;DP=363;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.14;SOR=1.227 GT:AD:DP:GQ:PL 1/1:0,363:363:99:12059,1086,0 chr1 25782746 . A G 2939.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.56;SOR=2.698 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2968,249,0 chr1 25782816 . G C 1208.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.07;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1237,93,0 chr1 25783574 . A G 5331.77 PASS AC=2;AF=1.00;AN=2;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.40;SOR=2.140 GT:AD:DP:GQ:PL 1/1:0,155:155:99:5360,465,0 chr1 25783652 . G A 8752.77 PASS AC=2;AF=1.00;AN=2;DP=271;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.30;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,271:271:99:8781,812,0 chr1 25797259 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 25798120 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 25800529 . G A 234.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.54;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:263,21,0 chr1 25800711 . T G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.23;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 25800712 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.83;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 25800934 . G A 3735.77 PASS AC=2;AF=1.00;AN=2;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.56;SOR=4.219 GT:AD:DP:GQ:PL 1/1:0,99:99:99:3764,297,0 chr1 25801816 . C T 774.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.49;SOR=2.636 GT:AD:DP:GQ:PL 1/1:0,21:21:63:803,63,0 chr1 25804968 . G A 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-1.981;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr1 25805163 . G A 5409.77 PASS AC=2;AF=1.00;AN=2;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.60;SOR=1.762 GT:AD:DP:GQ:PL 1/1:0,161:161:99:5438,482,0 chr1 25806608 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 25809422 . T C 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 25809961 . A C 1705.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.46;SOR=7.523 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1734,126,0 chr1 25811645 . C A 5833.77 PASS AC=2;AF=1.00;AN=2;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.24;SOR=1.031 GT:AD:DP:GQ:PL 1/1:0,155:155:99:5862,466,0 chr1 25811771 . T C 4400.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.89;SOR=1.059 GT:AD:DP:GQ:PL 1/1:0,138:138:99:4429,414,0 chr1 25811960 . A G 488.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.91;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:517,42,0 chr1 25812646 . C T 1832.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.14;SOR=2.970 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1861,152,0 chr1 25812901 . A G 6361.77 PASS AC=2;AF=1.00;AN=2;DP=195;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.62;SOR=1.634 GT:AD:DP:GQ:PL 1/1:0,195:195:99:6390,586,0 chr1 25812953 . G A 3517.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.50;SOR=2.193 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3546,315,0 chr1 25813388 . C G 2361.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.29;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2390,198,0 chr1 25813428 . C T 3740.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.94;SOR=3.111 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3769,313,0 chr1 25814082 . C A 6303.77 PASS AC=2;AF=1.00;AN=2;DP=207;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.45;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,207:207:99:6332,619,0 chr1 25815312 . G T 233.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.98;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:27:262,27,0 chr1 25820023 . G C 376.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.77;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:405,27,0 chr1 25820048 . A C 609.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.08;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:638,45,0 chr1 25820393 . C G 2557.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.75;SOR=1.577 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2586,216,0 chr1 25823532 . C T 6606.77 PASS AC=2;AF=1.00;AN=2;DP=183;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.20;SOR=0.894 GT:AD:DP:GQ:PL 1/1:0,183:183:99:6635,550,0 chr1 25826175 . T C 1968.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.58;SOR=2.628 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1997,159,0 chr1 25826267 . A G 5154.77 PASS AC=2;AF=1.00;AN=2;DP=163;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.62;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,163:163:99:5183,488,0 chr1 25829315 . C T 321.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.18;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:30:350,30,0 chr1 25831846 . C T 920.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.96;SOR=4.892 GT:AD:DP:GQ:PL 1/1:0,23:23:69:949,69,0 chr1 25832471 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 25862134 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 25862152 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 25869113 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 25881887 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 25883673 . C T 73.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:101,12,0 chr1 25888825 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 25901918 . A G 91.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:119,9,0 chr1 25905865 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 25912626 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 25916391 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 25932946 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 25932960 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 25977059 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 25982702 . A C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 25983549 . C A 145.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.63;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:173,12,0 chr1 25983574 . C A 187.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.42;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:216,15,0 chr1 25983722 . T C 1546.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.70;SOR=2.007 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1575,132,0 chr1 25983903 . A G 4133.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.34;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,124:124:99:4162,372,0 chr1 25984345 . G T 1892.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.80;SOR=1.919 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1921,167,0 chr1 25987920 . C T 94.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0 chr1 25988073 . T C 1607.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.32;SOR=3.716 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1636,126,0 chr1 26021932 . C T 58.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:86,6,0 chr1 26021983 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 26023476 . C T 658.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.121;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=2.633;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.76;ReadPosRankSum=-1.349;SOR=1.118 GT:AD:DP:GQ:PL 0/1:30,26:56:99:687,0,832 chr1 26031165 . C A 3651.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.801;ClippingRankSum=0.000;DP=252;ExcessHet=3.0103;FS=5.046;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.49;ReadPosRankSum=1.738;SOR=0.913 GT:AD:DP:GQ:PL 0/1:123,129:252:99:3680,0,3198 chr1 26031176 . G A 3084.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.247;ClippingRankSum=0.000;DP=255;ExcessHet=3.0103;FS=5.845;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.10;ReadPosRankSum=-1.701;SOR=0.759 GT:AD:DP:GQ:PL 0/1:131,124:255:99:3113,0,3696 chr1 26031364 . A G 3034.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,84:84:99:3063,252,0 chr1 26035510 . C T 290.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.457;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.30;ReadPosRankSum=0.928;SOR=1.609 GT:AD:DP:GQ:PL 0/1:10,9:19:99:319,0,326 chr1 26038883 . T G 832.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.104;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=5.349;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.25;ReadPosRankSum=0.071;SOR=0.280 GT:AD:DP:GQ:PL 0/1:36,32:68:99:861,0,985 chr1 26039058 . C T 2972.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.019;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=0.560;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.52;ReadPosRankSum=-0.628;SOR=0.614 GT:AD:DP:GQ:PL 0/1:78,102:180:99:3001,0,2211 chr1 26042063 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 26042296 . C T 164.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.98;ReadPosRankSum=0.905;SOR=0.399 GT:AD:DP:GQ:PL 0/1:9,6:15:99:193,0,331 chr1 26042806 . T C 396.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.12;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,11:11:33:425,33,0 chr1 26043673 . G A 496.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.891;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.80;ReadPosRankSum=-0.704;SOR=0.804 GT:AD:DP:GQ:PL 0/1:20,16:36:99:525,0,557 chr1 26044790 . A G 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=1.242;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr1 26045297 . G A 349.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.80;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:32:378,32,0 chr1 26045653 . A G 3145.77 PASS AC=2;AF=1.00;AN=2;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=2.941 GT:AD:DP:GQ:PL 1/1:0,87:87:99:3174,261,0 chr1 26046114 . G C 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.29;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 26050116 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 26054314 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 26057384 . A G 650.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.887;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.427;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.02;ReadPosRankSum=0.862;SOR=1.179 GT:AD:DP:GQ:PL 0/1:30,20:50:99:679,0,928 chr1 26057522 . A G 786.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.611;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=8.341;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.43;ReadPosRankSum=0.665;SOR=2.254 GT:AD:DP:GQ:PL 0/1:27,24:51:99:815,0,860 chr1 26058199 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 26058512 . T C 5035.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.272;ClippingRankSum=0.000;DP=369;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.65;ReadPosRankSum=0.221;SOR=0.549 GT:AD:DP:GQ:PL 0/1:179,190:369:99:5064,0,4752 chr1 26058659 . G C 3264.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.151;ClippingRankSum=0.000;DP=259;ExcessHet=3.0103;FS=1.590;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.61;ReadPosRankSum=-0.540;SOR=0.572 GT:AD:DP:GQ:PL 0/1:138,121:259:99:3293,0,3718 chr1 26060932 . G A 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-0.566;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr1 26061134 . A C 2578.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.231;ClippingRankSum=0.000;DP=165;ExcessHet=3.0103;FS=2.208;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.63;ReadPosRankSum=0.023;SOR=0.497 GT:AD:DP:GQ:PL 0/1:75,90:165:99:2607,0,2074 chr1 26066838 . C T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 26066856 . C G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 26067014 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 26114227 . A T 857.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.226;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=6.029;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.75;ReadPosRankSum=-0.969;SOR=0.223 GT:AD:DP:GQ:PL 0/1:40,33:73:99:886,0,1207 chr1 26117876 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 26121956 . A G 1452.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.298;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=6.698;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.44;ReadPosRankSum=0.070;SOR=1.035 GT:AD:DP:GQ:PL 0/1:66,61:127:99:1481,0,1760 chr1 26122358 . T C 1129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.519;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=1.518;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.57;ReadPosRankSum=-0.395;SOR=0.522 GT:AD:DP:GQ:PL 0/1:72,46:118:99:1158,0,2073 chr1 26147760 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 26156065 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 26156366 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 26161528 . G A 4778.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.707;ClippingRankSum=0.000;DP=325;ExcessHet=3.0103;FS=0.401;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.70;ReadPosRankSum=-1.458;SOR=0.721 GT:AD:DP:GQ:PL 0/1:154,171:325:99:4807,0,4505 chr1 26164527 . G C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 26164864 . C A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 26165001 . C T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 26165194 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 26170160 . T C 4604.77 PASS AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.32;SOR=1.642 GT:AD:DP:GQ:PL 1/1:0,147:147:99:4633,441,0 chr1 26170379 . A G 3808.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.01;SOR=2.261 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3837,336,0 chr1 26170849 . A C 187.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.31;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:216,18,0 chr1 26171135 . C G 104.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:132,12,0 chr1 26177545 . G A 1503.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.988;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=4.707;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.67;ReadPosRankSum=-0.518;SOR=1.020 GT:AD:DP:GQ:PL 0/1:50,60:110:99:1532,0,1060 chr1 26177705 . C G 642.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.14;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:671,51,0 chr1 26180262 . A G 371.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.609;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=1.882;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.77;ReadPosRankSum=-0.346;SOR=0.264 GT:AD:DP:GQ:PL 0/1:13,14:27:99:400,0,394 chr1 26180299 . A G 484.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=-0.260;SOR=0.498 GT:AD:DP:GQ:PL 0/1:20,20:40:99:513,0,579 chr1 26181096 . A G 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=0.167;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:173,0,255 chr1 26181802 . G A 1615.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.203;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=1.599;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.82;ReadPosRankSum=0.280;SOR=0.526 GT:AD:DP:GQ:PL 0/1:69,57:126:99:1644,0,2048 chr1 26181989 . T C 1938.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.859;ClippingRankSum=0.000;DP=170;ExcessHet=3.0103;FS=1.335;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=-0.178;SOR=0.560 GT:AD:DP:GQ:PL 0/1:96,74:170:99:1967,0,2600 chr1 26185209 . A G 1114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.426;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.53;ReadPosRankSum=-1.641;SOR=0.713 GT:AD:DP:GQ:PL 0/1:69,48:117:99:1143,0,1835 chr1 26190354 . T C 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.37;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 26190776 . A G 965.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.606;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=0.755;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.25;ReadPosRankSum=0.579;SOR=0.586 GT:AD:DP:GQ:PL 0/1:75,42:117:99:994,0,2118 chr1 26191176 . T C 1612.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.219;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=2.794;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.81;ReadPosRankSum=-1.635;SOR=0.444 GT:AD:DP:GQ:PL 0/1:40,62:102:99:1641,0,929 chr1 26191282 . T C 3238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.417;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=2.784;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.37;ReadPosRankSum=0.758;SOR=0.819 GT:AD:DP:GQ:PL 0/1:72,87:159:99:3267,0,3719 chr1 26191303 . A G 3037.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.966;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=2.904;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.25;ReadPosRankSum=-1.057;SOR=0.979 GT:AD:DP:GQ:PL 0/1:73,77:150:99:3066,0,3769 chr1 26191400 . C T 906.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.556;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=1.977;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.06;ReadPosRankSum=0.269;SOR=0.941 GT:AD:DP:GQ:PL 0/1:49,33:82:99:935,0,1459 chr1 26195723 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 26197910 . A G 548.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.504;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=15.205;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-2.150;SOR=2.524 GT:AD:DP:GQ:PL 0/1:49,20:69:99:577,0,1211 chr1 26198029 . G A 1423.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.566;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=0.733;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=-0.736;SOR=0.556 GT:AD:DP:GQ:PL 0/1:53,53:106:99:1452,0,1580 chr1 26198215 . A G 2863.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.502;ClippingRankSum=0.000;DP=223;ExcessHet=3.0103;FS=4.612;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.90;ReadPosRankSum=-0.615;SOR=0.992 GT:AD:DP:GQ:PL 0/1:114,108:222:99:2892,0,3017 chr1 26199857 . G C 1438.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.707;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=10.793;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.70;ReadPosRankSum=-0.561;SOR=0.121 GT:AD:DP:GQ:PL 0/1:55,50:105:99:1467,0,1790 chr1 26199948 . A G 3613.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.110;ClippingRankSum=0.000;DP=279;ExcessHet=3.0103;FS=3.432;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=0.480;SOR=0.918 GT:AD:DP:GQ:PL 0/1:151,128:279:99:3642,0,3751 chr1 26200672 . C A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 26201208 . T C 1429.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.762;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.817;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.43;ReadPosRankSum=0.909;SOR=0.573 GT:AD:DP:GQ:PL 0/1:44,43:87:99:1458,0,1466 chr1 26202270 . G A 175.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.664;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.55;ReadPosRankSum=-0.956;SOR=0.175 GT:AD:DP:GQ:PL 0/1:7,7:14:99:204,0,250 chr1 26202431 . C G 1091.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.567;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.03;ReadPosRankSum=0.424;SOR=0.639 GT:AD:DP:GQ:PL 0/1:55,44:99:99:1120,0,1328 chr1 26202630 . G C 739.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.131;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=1.206;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.13;ReadPosRankSum=-1.906;SOR=0.968 GT:AD:DP:GQ:PL 0/1:34,27:61:99:768,0,1032 chr1 26219373 . T C 607.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.816;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=2.049;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.71;ReadPosRankSum=-0.700;SOR=1.609 GT:AD:DP:GQ:PL 0/1:12,16:28:99:636,0,430 chr1 26219374 . G A 607.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.823;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=2.049;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.71;ReadPosRankSum=-1.002;SOR=1.609 GT:AD:DP:GQ:PL 0/1:12,16:28:99:636,0,430 chr1 26219455 . A C 742.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=1.931 GT:AD:DP:GQ:PL 1/1:0,22:22:66:771,66,0 chr1 26219740 . A T 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:101,0,30 chr1 26220624 . T C 646.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.66;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:675,51,0 chr1 26220688 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 26222455 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 26257507 . T C 765.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.64;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,19:19:57:794,57,0 chr1 26270944 . G A 6655.77 PASS AC=2;AF=1.00;AN=2;DP=200;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.45;SOR=1.106 GT:AD:DP:GQ:PL 1/1:0,199:199:99:6684,596,0 chr1 26271182 . G A 1168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.121;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=3.328;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.57;ReadPosRankSum=-0.040;SOR=0.362 GT:AD:DP:GQ:PL 0/1:50,43:93:99:1197,0,1536 chr1 26271790 . T C 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 26274894 . G A 1185.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.821;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=10.270;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.22;ReadPosRankSum=1.016;SOR=1.799 GT:AD:DP:GQ:PL 0/1:55,42:97:99:1214,0,1520 chr1 26279800 . C T 878.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.702;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.66;ReadPosRankSum=-1.759;SOR=0.675 GT:AD:DP:GQ:PL 0/1:51,40:91:99:907,0,1312 chr1 26280632 . C T 220.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.676;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.98;ReadPosRankSum=-0.502;SOR=1.270 GT:AD:DP:GQ:PL 0/1:5,8:13:99:249,0,124 chr1 26282278 . C T 1046.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.142;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=7.092;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.62;ReadPosRankSum=-1.762;SOR=1.229 GT:AD:DP:GQ:PL 0/1:25,38:63:99:1075,0,655 chr1 26282323 . A G 2245.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.956;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=28.99;ReadPosRankSum=4.286;SOR=0.892 GT:AD:DP:GQ:PL 0/1:7,53:60:91:2274,0,91 chr1 26282602 . A T 3880.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.384;ClippingRankSum=0.000;DP=267;ExcessHet=3.0103;FS=7.479;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.53;ReadPosRankSum=-2.644;SOR=0.780 GT:AD:DP:GQ:PL 0/1:128,139:267:99:3909,0,3473 chr1 26282645 . C T 3775.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.262;ClippingRankSum=0.000;DP=273;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.83;ReadPosRankSum=-0.790;SOR=0.720 GT:AD:DP:GQ:PL 0/1:140,133:273:99:3804,0,3428 chr1 26282768 . C T 2150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.316;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.44;ReadPosRankSum=-1.093;SOR=0.668 GT:AD:DP:GQ:PL 0/1:121,85:206:99:2179,0,3434 chr1 26282816 . G T 6344.77 PASS AC=2;AF=1.00;AN=2;DP=186;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,186:186:99:6373,558,0 chr1 26284400 . A C 8597.77 PASS AC=2;AF=1.00;AN=2;DP=263;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.69;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,263:263:99:8626,789,0 chr1 26285551 . A G 1500.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.27;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1529,144,0 chr1 26293863 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 26293998 . T C 637.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.67;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:666,48,0 chr1 26294507 . A G 496.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.12;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,15:15:45:525,45,0 chr1 26296420 . G A 47.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:75,6,0 chr1 26297836 . G A 720.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.04;SOR=2.531 GT:AD:DP:GQ:PL 1/1:0,20:20:60:749,60,0 chr1 26300792 . A G 1807.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.21;SOR=7.614 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1836,132,0 chr1 26300987 . T C 9533.77 PASS AC=2;AF=1.00;AN=2;DP=290;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.88;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,290:290:99:9562,870,0 chr1 26301310 . G A 231.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:260,21,0 chr1 26302974 . G C 2449.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.41;SOR=2.704 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2478,207,0 chr1 26306290 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 26306340 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 26312510 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 26315598 . C T 163.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.40;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:192,21,0 chr1 26317723 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 26319637 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 26320083 . G A 208.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.778;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.94;ReadPosRankSum=0.872;SOR=0.321 GT:AD:DP:GQ:PL 0/1:13,8:21:99:237,0,480 chr1 26320235 . A G 5760.77 PASS AC=2;AF=1.00;AN=2;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.57;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,132:132:99:5789,400,0 chr1 26320239 . A G 5785.77 PASS AC=2;AF=1.00;AN=2;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.72;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,132:132:99:5814,403,0 chr1 26322060 . G C 10055.77 PASS AC=2;AF=1.00;AN=2;DP=306;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.86;SOR=1.164 GT:AD:DP:GQ:PL 1/1:0,306:306:99:10084,918,0 chr1 26322335 . G A 1438.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.473;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.11;ReadPosRankSum=0.587;SOR=0.793 GT:AD:DP:GQ:PL 0/1:49,53:102:99:1467,0,1392 chr1 26324059 . C A 1363.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.166;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=-0.121;SOR=0.560 GT:AD:DP:GQ:PL 0/1:45,45:90:99:1392,0,1398 chr1 26328077 . C T 515.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.176;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.19;ReadPosRankSum=-0.869;SOR=0.836 GT:AD:DP:GQ:PL 0/1:14,16:30:99:544,0,460 chr1 26328446 . G C 5007.77 PASS AC=2;AF=1.00;AN=2;DP=142;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=2.439 GT:AD:DP:GQ:PL 1/1:0,142:142:99:5036,427,0 chr1 26328717 . C T 5092.77 PASS AC=2;AF=1.00;AN=2;DP=150;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.95;SOR=2.787 GT:AD:DP:GQ:PL 1/1:0,150:150:99:5121,448,0 chr1 26328971 . C T 4170.77 PASS AC=2;AF=1.00;AN=2;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.92;SOR=3.298 GT:AD:DP:GQ:PL 1/1:0,114:114:99:4199,343,0 chr1 26329016 . C A 642.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.175;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.13;ReadPosRankSum=0.148;SOR=1.085 GT:AD:DP:GQ:PL 0/1:32,21:53:99:671,0,1097 chr1 26329123 . A G 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.524;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr1 26331900 . A C 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr1 26336283 . C T 8169.77 PASS AC=2;AF=1.00;AN=2;DP=248;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.94;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,248:248:99:8198,743,0 chr1 26336871 . C T 5076.77 PASS AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.62;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,151:151:99:5105,452,0 chr1 26338477 . C T 3287.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.868;ClippingRankSum=0.000;DP=260;ExcessHet=3.0103;FS=4.103;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=-1.359;SOR=0.682 GT:AD:DP:GQ:PL 0/1:128,132:260:99:3316,0,3273 chr1 26339111 . G C 408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.44;ReadPosRankSum=0.380;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,12:20:99:437,0,270 chr1 26339500 . C G 905.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.89;SOR=4.091 GT:AD:DP:GQ:PL 1/1:0,24:24:72:934,72,0 chr1 26344261 . C T 1871.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.614;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=2.656;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.83;ReadPosRankSum=-0.249;SOR=0.842 GT:AD:DP:GQ:PL 0/1:38,67:105:99:1900,0,1009 chr1 26344593 . G T 4151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.154;ClippingRankSum=0.000;DP=415;ExcessHet=3.0103;FS=0.525;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.00;ReadPosRankSum=1.027;SOR=0.648 GT:AD:DP:GQ:PL 0/1:239,176:415:99:4180,0,6253 chr1 26344757 . A G 2926.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.652;ClippingRankSum=0.000;DP=213;ExcessHet=3.0103;FS=5.849;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.74;ReadPosRankSum=0.460;SOR=0.423 GT:AD:DP:GQ:PL 0/1:108,105:213:99:2955,0,3126 chr1 26346585 . G A 3531.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.243;ClippingRankSum=0.000;DP=241;ExcessHet=3.0103;FS=0.487;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.65;ReadPosRankSum=1.130;SOR=0.642 GT:AD:DP:GQ:PL 0/1:108,133:241:99:3560,0,2797 chr1 26346617 . C T 2920.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.277;ClippingRankSum=0.000;DP=187;ExcessHet=3.0103;FS=0.613;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.62;ReadPosRankSum=-0.029;SOR=0.789 GT:AD:DP:GQ:PL 0/1:83,104:187:99:2949,0,2221 chr1 26346729 . A G 623.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.639;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.90;ReadPosRankSum=0.925;SOR=2.004 GT:AD:DP:GQ:PL 0/1:15,18:33:99:652,0,456 chr1 26374304 . T C 2719.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.17;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2748,246,0 chr1 26398293 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 26403942 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 26425638 . A G 435.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.89;ReadPosRankSum=-0.886;SOR=0.846 GT:AD:DP:GQ:PL 0/1:26,14:40:99:464,0,966 chr1 26426501 . T C 2564.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.250;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=4.254;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.36;ReadPosRankSum=0.011;SOR=1.112 GT:AD:DP:GQ:PL 0/1:78,89:167:99:2593,0,2073 chr1 26439094 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 26469240 . C T 752.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.185;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.68;ReadPosRankSum=-0.352;SOR=0.658 GT:AD:DP:GQ:PL 0/1:22,26:48:99:781,0,633 chr1 26504136 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 26522133 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 26529971 . T G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 26543119 . G A 3314.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.200;ClippingRankSum=0.000;DP=261;ExcessHet=3.0103;FS=8.201;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.75;ReadPosRankSum=-0.470;SOR=1.171 GT:AD:DP:GQ:PL 0/1:133,127:260:99:3343,0,3507 chr1 26546642 . C T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-1.150;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,106 chr1 26546754 . A G 1227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.345;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.44;ReadPosRankSum=1.479;SOR=0.873 GT:AD:DP:GQ:PL 0/1:48,37:85:99:1256,0,1625 chr1 26551899 . G A 2019.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.879;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=7.604;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.26;ReadPosRankSum=-0.691;SOR=0.177 GT:AD:DP:GQ:PL 0/1:51,66:117:99:2048,0,1697 chr1 26553301 . T C 405.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.390;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.90;ReadPosRankSum=0.695;SOR=0.478 GT:AD:DP:GQ:PL 0/1:27,14:41:99:434,0,836 chr1 26553429 . T C 5077.77 PASS AC=2;AF=1.00;AN=2;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.19;SOR=1.504 GT:AD:DP:GQ:PL 1/1:0,153:153:99:5106,459,0 chr1 26555367 . C T 2050.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.377;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=14.199;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.02;ReadPosRankSum=1.040;SOR=0.185 GT:AD:DP:GQ:PL 0/1:58,70:128:99:2079,0,1856 chr1 26556219 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 26557020 . A C 4890.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.641;ClippingRankSum=0.000;DP=410;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.96;ReadPosRankSum=-0.371;SOR=0.685 GT:AD:DP:GQ:PL 0/1:214,195:409:99:4919,0,5391 chr1 26560468 . C G 122.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.35;ReadPosRankSum=1.029;SOR=0.330 GT:AD:DP:GQ:PL 0/1:3,5:8:95:151,0,95 chr1 26573196 . C A 2497.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.451;ClippingRankSum=0.000;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.47;ReadPosRankSum=0.493;SOR=0.741 GT:AD:DP:GQ:PL 0/1:58,85:143:99:2526,0,1574 chr1 26574217 . G A 3009.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.845;ClippingRankSum=0.000;DP=285;ExcessHet=3.0103;FS=5.553;MLEAC=1;MLEAF=0.500;MQ=59.99;MQRankSum=0.000;QD=10.60;ReadPosRankSum=0.725;SOR=1.020 GT:AD:DP:GQ:PL 0/1:161,123:284:99:3038,0,4530 chr1 26574244 . C G 2830.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.645;ClippingRankSum=0.000;DP=270;ExcessHet=3.0103;FS=0.459;MLEAC=1;MLEAF=0.500;MQ=59.99;MQRankSum=0.000;QD=10.52;ReadPosRankSum=0.784;SOR=0.752 GT:AD:DP:GQ:PL 0/1:156,113:269:99:2859,0,4468 chr1 26574314 . G A 1976.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.136;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=5.670;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.20;ReadPosRankSum=-1.426;SOR=1.215 GT:AD:DP:GQ:PL 0/1:99,63:162:99:2005,0,2963 chr1 26641594 . G A 152.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:181,15,0 chr1 26847237 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 26852571 . G T 1004.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.342;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=1.113;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.22;ReadPosRankSum=0.678;SOR=0.454 GT:AD:DP:GQ:PL 0/1:40,36:76:99:1033,0,1204 chr1 26856493 . T G 191.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.40;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:220,21,0 chr1 26884230 . T C 5955.77 PASS AC=2;AF=1.00;AN=2;DP=184;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.37;SOR=1.014 GT:AD:DP:GQ:PL 1/1:0,184:184:99:5984,552,0 chr1 26946353 . C T 118.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.76;ReadPosRankSum=0.524;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:147,0,27 chr1 26951948 . G A 1670.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.016;ClippingRankSum=0.000;DP=130;ExcessHet=3.0103;FS=1.393;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=-0.295;SOR=0.532 GT:AD:DP:GQ:PL 0/1:66,64:130:99:1699,0,1946 chr1 26993865 . T C 486.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.42;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:48:515,48,0 chr1 27012612 . G T 525.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.434;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=6.864;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.56;ReadPosRankSum=-1.418;SOR=0.160 GT:AD:DP:GQ:PL 0/1:33,22:55:99:554,0,1043 chr1 27033520 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 27040484 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 27046433 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 27100305 . T C 2662.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.87;SOR=1.668 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2691,243,0 chr1 27100550 . T C 7333.77 PASS AC=2;AF=1.00;AN=2;DP=227;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.31;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,227:227:99:7362,681,0 chr1 27157004 . T G 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr1 27237195 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 27283489 . T G 9481.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-1.119;ClippingRankSum=0.000;DP=308;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.78;ReadPosRankSum=-0.609;SOR=0.442 GT:AD:DP:GQ:PL 1/1:1,307:308:99:9510,863,0 chr1 27283578 . C T 4502.77 PASS AC=2;AF=1.00;AN=2;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.91;SOR=2.009 GT:AD:DP:GQ:PL 1/1:0,129:129:99:4531,387,0 chr1 27296105 . A G 490.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.56;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:519,39,0 chr1 27296637 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 27333474 . C T 438.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.45;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,12:12:36:467,36,0 chr1 27357905 . G A 296.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.111;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=2.027;SOR=0.313 GT:AD:DP:GQ:PL 0/1:11,11:22:99:325,0,393 chr1 27359572 . G C 5047.77 PASS AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.43;SOR=1.657 GT:AD:DP:GQ:PL 1/1:0,151:151:99:5076,451,0 chr1 27369520 . C T 7599.77 PASS AC=2;AF=1.00;AN=2;DP=206;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.03;SOR=3.589 GT:AD:DP:GQ:PL 1/1:0,206:206:99:7628,619,0 chr1 27372958 . A T 232.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.86;ReadPosRankSum=-0.035;SOR=2.093 GT:AD:DP:GQ:PL 0/1:2,7:9:52:261,0,52 chr1 27380011 . A G 6388.77 PASS AC=2;AF=1.00;AN=2;DP=189;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.80;SOR=1.221 GT:AD:DP:GQ:PL 1/1:0,189:189:99:6417,567,0 chr1 27382530 . C T 2892.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.455;ClippingRankSum=0.000;DP=193;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.07;ReadPosRankSum=-0.383;SOR=0.682 GT:AD:DP:GQ:PL 0/1:93,99:192:99:2921,0,2725 chr1 27382554 . C T 6557.77 PASS AC=2;AF=1.00;AN=2;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.83;SOR=1.891 GT:AD:DP:GQ:PL 1/1:0,170:170:99:6586,515,0 chr1 27383368 . G T 266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=2.920;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.52;ReadPosRankSum=-0.480;SOR=2.303 GT:AD:DP:GQ:PL 0/1:5,8:13:99:295,0,170 chr1 27387009 . T A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 27387075 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 27393674 . C T 1122.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.980;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=4.188;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.21;ReadPosRankSum=-0.295;SOR=0.374 GT:AD:DP:GQ:PL 0/1:44,41:85:99:1151,0,1208 chr1 27395123 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 27396463 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 27414637 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 27416337 . T G 85.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.057;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.53;ReadPosRankSum=-0.366;SOR=0.069 GT:AD:DP:GQ:PL 0/1:4,5:9:99:114,0,140 chr1 27429047 . A T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=1.645;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 27441579 . C T 82.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:111,0,30 chr1 27489921 . G C 113.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.191;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=2.632;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.34;ReadPosRankSum=0.095;SOR=1.981 GT:AD:DP:GQ:PL 0/1:6,5:11:99:142,0,183 chr1 27513614 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 27524003 . A G 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.253;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr1 27527880 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 27538807 . A G 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=-0.967;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,81 chr1 27549313 . C T 3982.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.18;SOR=0.951 GT:AD:DP:GQ:PL 1/1:0,111:111:99:4011,333,0 chr1 27549971 . C A 6524.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.927;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.52;ReadPosRankSum=1.463;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,206:207:99:6553,608,0 chr1 27550907 . G A 2124.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.316;ClippingRankSum=0.000;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.65;ReadPosRankSum=-0.568;SOR=0.682 GT:AD:DP:GQ:PL 0/1:79,66:145:99:2153,0,2589 chr1 27551651 . C T 3518.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.886;ClippingRankSum=0.000;DP=276;ExcessHet=3.0103;FS=0.457;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.80;ReadPosRankSum=-0.959;SOR=0.641 GT:AD:DP:GQ:PL 0/1:144,131:275:99:3547,0,4133 chr1 27617489 . T A 3783.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.50;SOR=2.811 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3812,307,0 chr1 27634944 . T G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 27664540 . C T 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr1 27664550 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 27666749 . G A 73.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:101,12,0 chr1 27668566 . G T 4021.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.816;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=3.702;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.18;ReadPosRankSum=-0.981;SOR=0.746 GT:AD:DP:GQ:PL 1/1:1,128:129:99:4050,375,0 chr1 27686989 . C T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 27688843 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 27688861 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 27760444 . C A 2179.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=1.437 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2208,195,0 chr1 27880077 . T C 1725.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.022;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.72;ReadPosRankSum=-0.128;SOR=0.689 GT:AD:DP:GQ:PL 0/1:92,69:161:99:1754,0,2439 chr1 27881816 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.25;ReadPosRankSum=-0.484;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:107,0,271 chr1 27882794 . A G 3172.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.555;ClippingRankSum=0.000;DP=245;ExcessHet=3.0103;FS=3.533;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=0.136;SOR=0.506 GT:AD:DP:GQ:PL 0/1:123,122:245:99:3201,0,3146 chr1 27882851 . T C 4162.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.891;ClippingRankSum=0.000;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.45;ReadPosRankSum=0.209;SOR=0.693 GT:AD:DP:GQ:PL 0/1:107,107:214:99:4191,0,5482 chr1 27882855 . A G 4084.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.769;ClippingRankSum=0.000;DP=216;ExcessHet=3.0103;FS=0.504;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.91;ReadPosRankSum=0.706;SOR=0.633 GT:AD:DP:GQ:PL 0/1:110,106:216:99:4113,0,5566 chr1 27884873 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 27884892 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 27885139 . T C 2073.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.55;SOR=3.422 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2102,168,0 chr1 27885761 . G A 2383.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.11;SOR=1.778 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2412,216,0 chr1 27897801 . C T 627.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.89;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,21:21:63:656,63,0 chr1 27900061 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 27904649 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 27906778 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 27915891 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 27915901 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 27915936 . G T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 27923851 . G T 31.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0 chr1 27937239 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 27942062 . C T 885.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=1.199;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.63;ReadPosRankSum=-1.063;SOR=0.450 GT:AD:DP:GQ:PL 0/1:34,31:65:99:914,0,1055 chr1 27942195 . G A 2500.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.204;ClippingRankSum=0.000;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.69;ReadPosRankSum=-0.765;SOR=0.662 GT:AD:DP:GQ:PL 0/1:114,100:214:99:2529,0,3261 chr1 27942324 . A C 3042.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.122;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=3.620;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.39;ReadPosRankSum=0.183;SOR=0.468 GT:AD:DP:GQ:PL 0/1:96,79:175:99:3071,0,5202 chr1 27955781 . T C 3832.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.771;ClippingRankSum=0.000;DP=313;ExcessHet=3.0103;FS=3.023;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.28;ReadPosRankSum=-0.741;SOR=0.764 GT:AD:DP:GQ:PL 0/1:164,148:312:99:3861,0,4240 chr1 27956308 . T C 3105.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.26;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,88:88:99:3134,264,0 chr1 27959023 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.68;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 27963720 . C G 4355.77 PASS AC=2;AF=1.00;AN=2;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.00;SOR=1.701 GT:AD:DP:GQ:PL 1/1:0,132:132:99:4384,396,0 chr1 27967540 . T C 40.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:68,6,0 chr1 28042768 . G A 1256.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.93;SOR=3.737 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1285,105,0 chr1 28050205 . T A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 28096336 . C T 3066.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.56;QD=31.95;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,96:96:99:3095,288,0 chr1 28173300 . G T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 28200500 . A G 2624.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.104;ClippingRankSum=0.000;DP=190;ExcessHet=3.0103;FS=1.123;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.89;ReadPosRankSum=2.021;SOR=0.783 GT:AD:DP:GQ:PL 0/1:88,101:189:99:2653,0,2345 chr1 28215812 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.50;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 28215813 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.31;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 28232721 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 28233063 . C G 1654.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.547;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.96;ReadPosRankSum=-0.172;SOR=0.722 GT:AD:DP:GQ:PL 0/1:82,69:151:99:1683,0,2200 chr1 28233183 . A G 724.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.334;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=2.047;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.67;ReadPosRankSum=0.147;SOR=1.308 GT:AD:DP:GQ:PL 0/1:30,23:53:99:753,0,955 chr1 28236029 . C A 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.507;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.83;ReadPosRankSum=1.691;SOR=0.223 GT:AD:DP:GQ:PL 0/1:6,7:13:99:208,0,180 chr1 28236165 . A G 1117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.362;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=2.277;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.71;ReadPosRankSum=0.470;SOR=0.411 GT:AD:DP:GQ:PL 0/1:35,41:76:99:1146,0,1119 chr1 28237741 . A G 677.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.092;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.11;ReadPosRankSum=0.519;SOR=0.643 GT:AD:DP:GQ:PL 0/1:34,27:61:99:706,0,921 chr1 28237768 . A G 685.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.784;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.931;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.91;ReadPosRankSum=2.299;SOR=0.560 GT:AD:DP:GQ:PL 0/1:50,27:77:99:714,0,1346 chr1 28243129 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 28246715 . A G 1285.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.075;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=1.802;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.68;ReadPosRankSum=-0.410;SOR=0.989 GT:AD:DP:GQ:PL 0/1:40,54:94:99:1314,0,1091 chr1 28252410 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 28258702 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 28271509 . T C 402.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.292;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=0.254;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,14:17:74:431,0,74 chr1 28369580 . C A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.674;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 28369881 . C G 877.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.017;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=3.576;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.72;ReadPosRankSum=1.210;SOR=0.313 GT:AD:DP:GQ:PL 0/1:32,32:64:99:906,0,974 chr1 28380436 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 28380438 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 28386584 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 28403769 . C T 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=-2.189;SOR=0.446 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,112 chr1 28407482 . G T 1611.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.699;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=5.013;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.92;ReadPosRankSum=-0.507;SOR=0.367 GT:AD:DP:GQ:PL 0/1:41,67:108:99:1640,0,1057 chr1 28438583 . G A 274.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.49;ReadPosRankSum=-1.386;SOR=0.412 GT:AD:DP:GQ:PL 0/1:13,9:22:99:303,0,477 chr1 28470208 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 28473868 . C A 2169.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.353;ClippingRankSum=0.000;DP=173;ExcessHet=3.0103;FS=0.564;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.54;ReadPosRankSum=-0.131;SOR=0.611 GT:AD:DP:GQ:PL 0/1:95,78:173:99:2198,0,2627 chr1 28491085 . A G 736.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.042;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=1.448;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.40;ReadPosRankSum=0.456;SOR=0.351 GT:AD:DP:GQ:PL 0/1:30,25:55:99:765,0,947 chr1 28506411 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 28530161 . A C 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.010;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.86;SOR=1.911 GT:AD:DP:GQ:PL 0/1:6,3:9:99:108,0,273 chr1 28530163 . A C 118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.010;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.20;ReadPosRankSum=1.122;SOR=1.911 GT:AD:DP:GQ:PL 0/1:6,3:9:99:147,0,312 chr1 28530165 . A C 118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.80;ReadPosRankSum=0.728;SOR=1.981 GT:AD:DP:GQ:PL 0/1:7,4:11:99:147,0,312 chr1 28530167 . A C 118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.875;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.80;ReadPosRankSum=0.723;SOR=1.981 GT:AD:DP:GQ:PL 0/1:7,4:11:99:147,0,312 chr1 28535124 . G A 5979.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.415;ClippingRankSum=0.000;DP=391;ExcessHet=3.0103;FS=1.197;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.29;ReadPosRankSum=0.308;SOR=0.617 GT:AD:DP:GQ:PL 0/1:186,205:391:99:6008,0,5247 chr1 28536563 . A G 1622.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.235;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=0.727;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.98;ReadPosRankSum=1.332;SOR=0.835 GT:AD:DP:GQ:PL 0/1:66,59:125:99:1651,0,1990 chr1 28538025 . T C 1978.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.871;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.78;ReadPosRankSum=-0.166;SOR=0.683 GT:AD:DP:GQ:PL 0/1:88,80:168:99:2007,0,2358 chr1 28558398 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 28560519 . A G 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.765;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=-0.589;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,108 chr1 28566006 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 28567763 . T A 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=0.060;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr1 28592480 . C G 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.619;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.85;ReadPosRankSum=0.319;SOR=0.105 GT:AD:DP:GQ:PL 0/1:6,2:8:59:59,0,192 chr1 28593917 . A T 6619.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.216;ClippingRankSum=0.000;DP=459;ExcessHet=3.0103;FS=1.103;MLEAC=1;MLEAF=0.500;MQ=53.96;MQRankSum=1.871;QD=14.42;ReadPosRankSum=-0.221;SOR=0.816 GT:AD:DP:GQ:PL 0/1:211,248:459:99:6648,0,5405 chr1 28605113 . T G 563.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.567;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=1.231;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.84;ReadPosRankSum=0.999;SOR=1.051 GT:AD:DP:GQ:PL 0/1:30,22:52:99:592,0,824 chr1 28617720 . G A 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.728;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=-1.834;SOR=0.836 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,228 chr1 28663758 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 28690205 . T G 35.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.208;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.24;ReadPosRankSum=1.738;SOR=0.412 GT:AD:DP:GQ:PL 0/1:10,6:16:64:64,0,368 chr1 28693212 . G A 171.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.949;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.45;ReadPosRankSum=-0.687;SOR=1.230 GT:AD:DP:GQ:PL 0/1:9,6:15:99:200,0,297 chr1 28737047 . A C 4933.77 PASS AC=2;AF=1.00;AN=2;DP=153;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.46;SOR=1.533 GT:AD:DP:GQ:PL 1/1:0,152:152:99:4962,456,0 chr1 28738527 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 28812463 . G T 4357.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=2.068 GT:AD:DP:GQ:PL 1/1:0,125:125:99:4386,376,0 chr1 28812628 . C G 4839.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.545;ClippingRankSum=0.000;DP=363;ExcessHet=3.0103;FS=1.236;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.37;ReadPosRankSum=0.603;SOR=0.782 GT:AD:DP:GQ:PL 0/1:178,184:362:99:4868,0,4498 chr1 28818676 . C T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 28839811 . C A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 28855013 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 28863085 . C T 2750.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.908;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=3.005;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=0.249;SOR=0.925 GT:AD:DP:GQ:PL 0/1:136,96:232:99:2779,0,3891 chr1 28868306 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 28886804 . A C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 29018515 . T G 1203.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.04;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1232,96,0 chr1 29031386 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 29039234 . T C 978.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.145;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=1.141;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=1.365;SOR=0.473 GT:AD:DP:GQ:PL 0/1:42,34:76:99:1007,0,1304 chr1 29053480 . G A 136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.812;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=3.358;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.52;ReadPosRankSum=-1.102;SOR=0.132 GT:AD:DP:GQ:PL 0/1:7,6:13:99:165,0,253 chr1 29058974 . G C 643.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.317;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=-1.131;SOR=0.527 GT:AD:DP:GQ:PL 0/1:26,22:48:99:672,0,839 chr1 29059135 . C T 104.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.01;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:132,12,0 chr1 29064884 . A G 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.765;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=0.566;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,128 chr1 29112504 . T A 2394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.341;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=1.737;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.63;ReadPosRankSum=1.233;SOR=0.576 GT:AD:DP:GQ:PL 0/1:107,99:206:99:2423,0,2837 chr1 29121187 . G A 6345.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.169;ClippingRankSum=0.000;DP=541;ExcessHet=3.0103;FS=2.453;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.75;ReadPosRankSum=0.335;SOR=0.521 GT:AD:DP:GQ:PL 0/1:294,246:540:99:6374,0,8088 chr1 29124990 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 29131266 . G T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 29131373 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 29148829 . C T 633.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.157;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.08;ReadPosRankSum=-0.444;SOR=0.686 GT:AD:DP:GQ:PL 0/1:24,21:45:99:662,0,772 chr1 29148882 . C G 541.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.798;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.89;ReadPosRankSum=-0.389;SOR=0.627 GT:AD:DP:GQ:PL 0/1:20,19:39:99:570,0,650 chr1 29149136 . T G 3546.77 PASS AC=2;AF=1.00;AN=2;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.58;SOR=1.188 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3575,348,0 chr1 29193266 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 29203187 . T C 7538.77 PASS AC=2;AF=1.00;AN=2;DP=227;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.51;SOR=1.052 GT:AD:DP:GQ:PL 1/1:0,225:225:99:7567,675,0 chr1 29203431 . C T 322.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.004;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.67;ReadPosRankSum=-1.369;SOR=0.540 GT:AD:DP:GQ:PL 0/1:12,10:22:99:351,0,422 chr1 29206720 . T C 2441.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.023;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=2.035;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.62;ReadPosRankSum=1.623;SOR=0.868 GT:AD:DP:GQ:PL 0/1:76,91:167:99:2470,0,2147 chr1 29206961 . C A 3545.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.701;ClippingRankSum=0.000;DP=244;ExcessHet=3.0103;FS=2.292;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.59;ReadPosRankSum=-0.761;SOR=0.868 GT:AD:DP:GQ:PL 0/1:115,128:243:99:3574,0,2919 chr1 29207089 . C T 566.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.359;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=-1.618;SOR=0.402 GT:AD:DP:GQ:PL 0/1:26,18:44:99:595,0,929 chr1 29215923 . C G 5207.77 PASS AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.39;SOR=2.979 GT:AD:DP:GQ:PL 1/1:0,147:147:99:5236,439,0 chr1 29216125 . A G 7134.77 PASS AC=2;AF=1.00;AN=2;DP=209;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.30;SOR=1.477 GT:AD:DP:GQ:PL 1/1:0,208:208:99:7163,625,0 chr1 29216143 . G A 2463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.928;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=3.438;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.63;ReadPosRankSum=0.243;SOR=0.963 GT:AD:DP:GQ:PL 0/1:104,91:195:99:2492,0,2794 chr1 29216165 . C T 1966.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.561;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=0.648;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-2.471;SOR=0.773 GT:AD:DP:GQ:PL 0/1:82,73:155:99:1995,0,2354 chr1 29216414 . A T 637.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.05;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,16:16:48:666,48,0 chr1 29230712 . C T 1727.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.075;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=3.685;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.47;ReadPosRankSum=0.472;SOR=0.991 GT:AD:DP:GQ:PL 0/1:93,72:165:99:1756,0,2319 chr1 29236503 . G C 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.15;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr1 29236547 . C T 305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.599;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.963;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.84;ReadPosRankSum=0.048;SOR=2.517 GT:AD:DP:GQ:PL 0/1:5,9:14:99:334,0,133 chr1 29236849 . T C 2288.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.949;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=2.503;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.62;ReadPosRankSum=-0.534;SOR=0.536 GT:AD:DP:GQ:PL 0/1:105,92:197:99:2317,0,2609 chr1 29240128 . C T 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr1 29257759 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 29289806 . C A 1339.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.553;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=3.942;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.40;ReadPosRankSum=-1.215;SOR=1.186 GT:AD:DP:GQ:PL 0/1:46,54:100:99:1368,0,1179 chr1 29304538 . G A 177.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.64;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:206,18,0 chr1 29319615 . G T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 29355574 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 29357646 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 29369548 . T C 572.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.317;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.93;ReadPosRankSum=0.567;SOR=0.620 GT:AD:DP:GQ:PL 0/1:22,26:48:99:601,0,502 chr1 29396708 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 29416231 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 29416879 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 29416896 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 29466454 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 29515749 . A T 519.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.65;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,15:15:45:548,45,0 chr1 29515791 . T C 167.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=1.885;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.39;ReadPosRankSum=1.944;SOR=0.269 GT:AD:DP:GQ:PL 0/1:12,8:20:99:196,0,376 chr1 29541165 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 29546743 . T C 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 29549486 . C A 96.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:124,9,0 chr1 29549491 . C T 106.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:134,12,0 chr1 29549521 . G A 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 29555115 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 29555171 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 29555241 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 29555292 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 29556830 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 29593265 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 29593267 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 29604753 . A C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 29630825 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 29642996 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 29685826 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 29690970 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 29694480 . T G 54.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.23;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:82,6,0 chr1 29707788 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 29749699 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.96;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 29811142 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 29830659 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.85;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:75:75,0,109 chr1 29837478 . G A 55.90 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.18;ReadPosRankSum=-0.253;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:15:84,0,15 chr1 29882081 . A G 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 29890396 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 29890496 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 29891209 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 29892758 . C A 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr1 29896036 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 29896205 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 29896373 . G A 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr1 29907289 . G A 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr1 29924091 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 29925950 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30010482 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 30010519 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 30011195 . C T 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.015;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.86;ReadPosRankSum=1.803;SOR=1.179 GT:AD:DP:GQ:PL 0/1:6,3:9:99:108,0,331 chr1 30013718 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 30035614 . G A 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr1 30059601 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 30081837 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 30084592 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30085369 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 30145836 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 30161395 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 30183191 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 30183200 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 30184210 . T C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 30217804 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30226993 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 30247970 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 30253976 . G T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 30255521 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 30267045 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30267080 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30267279 . T A 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 30270411 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30270551 . C G 63.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:91,6,0 chr1 30270597 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 30322113 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30322259 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30322367 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 30329551 . A T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 30417296 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 30417488 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 30476522 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30480230 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30500508 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 30500512 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 30513007 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30526746 . G T 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr1 30534453 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30534526 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30539410 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 30541659 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 30556126 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 30556133 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 30581175 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 30597788 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 30598565 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30602338 . C T 36.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:64,6,0 chr1 30605439 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30605617 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 30635596 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 30647801 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 30658269 . G A 95.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.69;QD=23.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:123,12,0 chr1 30659306 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 30661313 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30665044 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 30701672 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30705195 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30705463 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30705504 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30707690 . A G 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 30707763 . C T 450.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.04;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:54:479,54,0 chr1 30707867 . G A 260.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:33:289,33,0 chr1 30707914 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 30708792 . C T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 30713407 . A G 553.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.57;SOR=2.712 GT:AD:DP:GQ:PL 1/1:0,17:17:51:582,51,0 chr1 30714960 . C G 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 30715242 . C T 8249.77 PASS AC=2;AF=1.00;AN=2;DP=270;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.67;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,269:269:99:8278,805,0 chr1 30715469 . A C 633.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.41;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,16:16:48:662,48,0 chr1 30716054 . A G 11226.77 PASS AC=2;AF=1.00;AN=2;DP=331;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.92;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,331:331:99:11255,994,0 chr1 30718246 . G C 234.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.54;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:263,21,0 chr1 30718619 . G C 382.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.42;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:411,30,0 chr1 30718669 . G C 1319.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.73;SOR=2.554 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1348,114,0 chr1 30719281 . C T 2904.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.51;SOR=3.373 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2933,240,0 chr1 30720245 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30721147 . A G 347.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=28.98;ReadPosRankSum=0.240;SOR=2.670 GT:AD:DP:GQ:PL 0/1:2,10:12:47:376,0,47 chr1 30723617 . C T 5568.77 PASS AC=2;AF=1.00;AN=2;DP=174;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.00;SOR=1.159 GT:AD:DP:GQ:PL 1/1:0,174:174:99:5597,522,0 chr1 30723738 . C T 429.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.921;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.99;ReadPosRankSum=0.847;SOR=0.527 GT:AD:DP:GQ:PL 0/1:28,15:43:99:458,0,1035 chr1 30737820 . G A 2219.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.47;SOR=3.804 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2248,177,0 chr1 30738005 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 30738008 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 30739394 . C A 1603.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.90;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1632,120,0 chr1 30739467 . A C 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr1 30739529 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30741436 . G A 249.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.908;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.392;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.69;ReadPosRankSum=-1.839;SOR=1.552 GT:AD:DP:GQ:PL 0/1:8,9:17:99:278,0,215 chr1 30742517 . T C 5721.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.971;ClippingRankSum=0.000;DP=440;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.03;ReadPosRankSum=0.530;SOR=0.679 GT:AD:DP:GQ:PL 0/1:227,212:439:99:5750,0,6063 chr1 30757252 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30757279 . C T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 30757348 . T C 327.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.367;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=2.350;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=-2.377;SOR=1.508 GT:AD:DP:GQ:PL 0/1:9,10:19:99:356,0,251 chr1 30757821 . C T 671.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.721;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.796;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=-0.882;SOR=0.362 GT:AD:DP:GQ:PL 0/1:26,24:50:99:700,0,870 chr1 30774827 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30790513 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 30790516 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 30790525 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 30805634 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30813130 . A C 68.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:96,9,0 chr1 30823057 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 30846071 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.50;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 30846075 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.85;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 30860627 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 30871825 . C G 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr1 30873210 . A G 2841.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.331;ClippingRankSum=0.000;DP=174;ExcessHet=3.0103;FS=2.818;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.33;ReadPosRankSum=-0.647;SOR=0.487 GT:AD:DP:GQ:PL 0/1:74,100:174:99:2870,0,2113 chr1 30874215 . C T 173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.904;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=0.989;SOR=0.340 GT:AD:DP:GQ:PL 0/1:10,6:16:99:202,0,352 chr1 30874473 . G A 2723.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.877;ClippingRankSum=0.000;DP=212;ExcessHet=3.0103;FS=3.098;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.97;ReadPosRankSum=0.771;SOR=0.649 GT:AD:DP:GQ:PL 0/1:108,102:210:99:2752,0,2867 chr1 30875793 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 30878433 . T C 457.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.615;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.07;ReadPosRankSum=-0.372;SOR=0.730 GT:AD:DP:GQ:PL 0/1:9,15:24:99:486,0,303 chr1 30881650 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 30908826 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 31094935 . A G 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=8.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.82;ReadPosRankSum=-0.792;SOR=2.215 GT:AD:DP:GQ:PL 0/1:5,2:7:69:69,0,337 chr1 31094936 . T G 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=8.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.82;ReadPosRankSum=-0.792;SOR=2.215 GT:AD:DP:GQ:PL 0/1:5,2:7:69:69,0,337 chr1 31094941 . T C 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=8.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.82;ReadPosRankSum=-1.068;SOR=2.215 GT:AD:DP:GQ:PL 0/1:5,2:7:69:69,0,337 chr1 31094942 . G A 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=8.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.82;ReadPosRankSum=-1.068;SOR=2.215 GT:AD:DP:GQ:PL 0/1:5,2:7:69:69,0,337 chr1 31166987 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 31182093 . C T 756.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.452;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.667;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.61;ReadPosRankSum=0.089;SOR=1.127 GT:AD:DP:GQ:PL 0/1:33,27:60:99:785,0,1063 chr1 31219843 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 31223734 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 31240016 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 31259543 . G A 162.77 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.25;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:200,21,0 chr1 31260306 . T C 493.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.387;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.11;ReadPosRankSum=-1.103;SOR=0.631 GT:AD:DP:GQ:PL 0/1:18,17:35:99:522,0,544 chr1 31260373 . C T 140.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.998;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.73;ReadPosRankSum=0.322;SOR=1.371 GT:AD:DP:GQ:PL 0/1:7,5:12:99:169,0,218 chr1 31260935 . T A 1889.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.269;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=0.704;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.04;ReadPosRankSum=0.557;SOR=0.623 GT:AD:DP:GQ:PL 0/1:68,89:157:99:1918,0,2004 chr1 31261079 . A G 8050.77 PASS AC=2;AF=1.00;AN=2;DP=252;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.07;SOR=1.591 GT:AD:DP:GQ:PL 1/1:0,251:251:99:8079,753,0 chr1 31267821 . C T 826.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.074;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.76;ReadPosRankSum=1.956;SOR=0.843 GT:AD:DP:GQ:PL 0/1:25,31:56:99:855,0,589 chr1 31271321 . G A 621.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.636;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=5.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=0.707;SOR=0.207 GT:AD:DP:GQ:PL 0/1:17,26:43:99:650,0,546 chr1 31281664 . G C 637.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.095;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=2.927;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.57;ReadPosRankSum=-1.029;SOR=0.193 GT:AD:DP:GQ:PL 0/1:12,19:31:99:666,0,408 chr1 31288802 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 31288878 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 31289013 . A G 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.000;SOR=0.368 GT:AD:DP:GQ:PL 0/1:2,4:6:53:149,0,53 chr1 31289089 . T A 206.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.191;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=-1.100;SOR=0.321 GT:AD:DP:GQ:PL 0/1:12,7:19:99:235,0,419 chr1 31289142 . G A 1947.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.92;SOR=3.098 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1976,162,0 chr1 31289527 . C T 1886.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.69;SOR=1.199 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1915,168,0 chr1 31291846 . G A 1135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.199;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=8.007;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.35;ReadPosRankSum=-0.666;SOR=0.124 GT:AD:DP:GQ:PL 0/1:35,39:74:99:1164,0,1142 chr1 31292083 . T C 2925.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.55;SOR=3.230 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2954,243,0 chr1 31293121 . C T 874.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.097;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.46;ReadPosRankSum=0.842;SOR=0.859 GT:AD:DP:GQ:PL 0/1:31,34:65:99:903,0,815 chr1 31296762 . G A 888.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.250;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=3.477;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.89;ReadPosRankSum=0.625;SOR=1.216 GT:AD:DP:GQ:PL 0/1:29,35:64:99:917,0,743 chr1 31296905 . T G 374.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.785;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=3.831;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=1.009;SOR=0.416 GT:AD:DP:GQ:PL 0/1:10,15:25:99:403,0,274 chr1 31306994 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 31307013 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 31310304 . A G 947.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.744;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=3.084;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.53;ReadPosRankSum=0.504;SOR=1.115 GT:AD:DP:GQ:PL 0/1:52,38:90:99:976,0,1402 chr1 31313896 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 31319294 . A G 256.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.861;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.51;ReadPosRankSum=1.464;SOR=0.582 GT:AD:DP:GQ:PL 0/1:10,9:19:99:285,0,292 chr1 31336969 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 31344963 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 31346620 . C T 1069.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.631;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=1.073;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.50;ReadPosRankSum=0.330;SOR=0.892 GT:AD:DP:GQ:PL 0/1:32,37:69:99:1098,0,891 chr1 31348820 . C T 392.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.446;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.71;ReadPosRankSum=0.343;SOR=0.616 GT:AD:DP:GQ:PL 0/1:13,12:25:99:421,0,434 chr1 31364460 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 31367579 . C G 1176.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.171;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=4.314;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.10;ReadPosRankSum=-1.076;SOR=0.188 GT:AD:DP:GQ:PL 0/1:29,36:65:99:1205,0,982 chr1 31372669 . C G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 31373017 . T C 4032.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.941;ClippingRankSum=0.000;DP=353;ExcessHet=3.0103;FS=0.390;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.49;ReadPosRankSum=-0.840;SOR=0.662 GT:AD:DP:GQ:PL 0/1:194,157:351:99:4061,0,5425 chr1 31373359 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 31373708 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 31409483 . T G 864.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=4.003 GT:AD:DP:GQ:PL 1/1:0,23:23:69:893,69,0 chr1 31410448 . T C 2118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.261;ClippingRankSum=0.000;DP=155;ExcessHet=3.0103;FS=0.601;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.67;ReadPosRankSum=1.282;SOR=0.793 GT:AD:DP:GQ:PL 0/1:73,82:155:99:2147,0,1715 chr1 31410628 . G A 471.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.60;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:500,36,0 chr1 31413717 . C G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:73:107,0,73 chr1 31413986 . T C 693.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.921;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.094;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=-0.023;SOR=0.914 GT:AD:DP:GQ:PL 0/1:28,26:54:99:722,0,735 chr1 31415989 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 31424646 . A G 478.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.50;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:507,39,0 chr1 31425285 . T C 821.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.781;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=4.091;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.68;ReadPosRankSum=0.678;SOR=1.200 GT:AD:DP:GQ:PL 0/1:72,35:107:99:850,0,1862 chr1 31425315 . C T 1158.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.970;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=5.531;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.52;ReadPosRankSum=-1.027;SOR=1.176 GT:AD:DP:GQ:PL 0/1:87,49:136:99:1187,0,2200 chr1 31425387 . T C 1762.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.856;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=2.602;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.58;ReadPosRankSum=0.135;SOR=0.877 GT:AD:DP:GQ:PL 0/1:109,75:184:99:1791,0,2715 chr1 31425432 . A C 1545.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.011;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=0.630;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.12;ReadPosRankSum=-0.595;SOR=0.734 GT:AD:DP:GQ:PL 0/1:77,62:139:99:1574,0,1948 chr1 31425616 . C T 274.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.011;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.87;ReadPosRankSum=0.135;SOR=0.806 GT:AD:DP:GQ:PL 0/1:29,11:40:99:303,0,920 chr1 31425689 . C T 430.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.213;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.28;ReadPosRankSum=0.000;SOR=0.648 GT:AD:DP:GQ:PL 0/1:34,18:52:99:459,0,1013 chr1 31426389 . C A 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.733;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.86;ReadPosRankSum=0.436;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,6:16:99:170,0,301 chr1 31426837 . A T 871.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.60;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,24:24:72:900,72,0 chr1 31426857 . C T 204.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.191;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.78;ReadPosRankSum=0.067;SOR=0.648 GT:AD:DP:GQ:PL 0/1:12,7:19:99:233,0,410 chr1 31428805 . T G 273.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.097;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.89;ReadPosRankSum=1.876;SOR=1.802 GT:AD:DP:GQ:PL 0/1:3,8:11:60:302,0,60 chr1 31429571 . A G 1834.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.691;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=7.385;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.97;ReadPosRankSum=0.987;SOR=1.269 GT:AD:DP:GQ:PL 0/1:116,68:184:99:1863,0,3319 chr1 31432883 . T C 973.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.26;SOR=6.439 GT:AD:DP:GQ:PL 1/1:0,24:24:72:1002,72,0 chr1 31434035 . A G 5728.77 PASS AC=2;AF=1.00;AN=2;DP=173;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.11;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,173:173:99:5757,520,0 chr1 31434255 . A G 587.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.743;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.389;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.34;ReadPosRankSum=2.025;SOR=0.407 GT:AD:DP:GQ:PL 0/1:18,23:41:99:616,0,482 chr1 31435968 . C A 101.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:129,12,0 chr1 31437355 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 31437490 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 31437635 . G A 111.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.36;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:140,0,27 chr1 31437808 . A G 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr1 31460507 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 31469080 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 31481402 . C T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 31488478 . C T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 31500015 . G A 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.44;ReadPosRankSum=-0.674;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:74,0,30 chr1 31502790 . A C 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr1 31502799 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 31504176 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 31506084 . C G 575.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.42;ReadPosRankSum=1.363;SOR=2.200 GT:AD:DP:GQ:PL 0/1:5,16:21:99:604,0,146 chr1 31506106 . A G 1590.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.32;SOR=7.276 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1619,111,0 chr1 31507537 . T C 1569.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.067;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=4.046;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.04;ReadPosRankSum=-1.660;SOR=0.656 GT:AD:DP:GQ:PL 0/1:46,41:87:99:1598,0,1847 chr1 31507614 . G A 1393.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.136;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=0.759;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.469;SOR=0.812 GT:AD:DP:GQ:PL 0/1:63,49:112:99:1422,0,1818 chr1 31507665 . G A 1859.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.252;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=0.629;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.48;ReadPosRankSum=-0.405;SOR=0.785 GT:AD:DP:GQ:PL 0/1:83,66:149:99:1888,0,2502 chr1 31507747 . A C 2529.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.888;ClippingRankSum=0.000;DP=221;ExcessHet=3.0103;FS=0.496;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.50;ReadPosRankSum=-0.415;SOR=0.631 GT:AD:DP:GQ:PL 0/1:122,98:220:99:2558,0,3211 chr1 31507808 . G A 2571.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.497;ClippingRankSum=0.000;DP=217;ExcessHet=3.0103;FS=0.502;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.02;ReadPosRankSum=0.696;SOR=0.638 GT:AD:DP:GQ:PL 0/1:117,97:214:99:2600,0,3359 chr1 31507839 . G A 2450.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.765;ClippingRankSum=0.000;DP=191;ExcessHet=3.0103;FS=1.127;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.90;ReadPosRankSum=-0.342;SOR=0.800 GT:AD:DP:GQ:PL 0/1:102,88:190:99:2479,0,2882 chr1 31507880 . C T 2015.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.309;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=2.780;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.68;ReadPosRankSum=-0.798;SOR=0.914 GT:AD:DP:GQ:PL 0/1:84,75:159:99:2044,0,2210 chr1 31508102 . T C 181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.022;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=4.269;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.06;ReadPosRankSum=0.579;SOR=1.911 GT:AD:DP:GQ:PL 0/1:22,8:30:99:210,0,652 chr1 31510219 . G A 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr1 31510231 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 31513593 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 31522548 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 31547507 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 31547527 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 31576939 . G A 126.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.015;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=-0.431;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,6:9:64:155,0,64 chr1 31619303 . C T 2655.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.977;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=1.009;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=-0.729;SOR=0.796 GT:AD:DP:GQ:PL 0/1:125,108:233:99:2684,0,3331 chr1 31619884 . G A 918.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.931;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.92;ReadPosRankSum=0.966;SOR=0.613 GT:AD:DP:GQ:PL 0/1:30,36:66:99:947,0,809 chr1 31620836 . G A 1737.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.512;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=3.908;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.09;ReadPosRankSum=-0.491;SOR=1.134 GT:AD:DP:GQ:PL 0/1:47,61:108:99:1766,0,1324 chr1 31621311 . A C 899.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.353;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.66;ReadPosRankSum=0.461;SOR=0.625 GT:AD:DP:GQ:PL 0/1:25,29:54:99:928,0,711 chr1 31626924 . A G 1029.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.204;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=0.731;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.19;ReadPosRankSum=-0.552;SOR=0.793 GT:AD:DP:GQ:PL 0/1:68,44:112:99:1058,0,1832 chr1 31627134 . T G 760.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.446;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=9.720;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.54;ReadPosRankSum=0.731;SOR=2.197 GT:AD:DP:GQ:PL 0/1:21,25:46:99:789,0,671 chr1 31627566 . G C 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.78;ReadPosRankSum=-1.210;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:176,0,179 chr1 31630664 . A G 828.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.009;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.73;ReadPosRankSum=1.686;SOR=1.003 GT:AD:DP:GQ:PL 0/1:16,26:42:99:857,0,436 chr1 31631145 . T C 605.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.188;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=2.208;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.63;ReadPosRankSum=1.231;SOR=1.519 GT:AD:DP:GQ:PL 0/1:10,18:28:99:634,0,287 chr1 31631214 . T C 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=0.508;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,140 chr1 31633440 . G A 438.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.802;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.25;ReadPosRankSum=-1.996;SOR=0.287 GT:AD:DP:GQ:PL 0/1:25,14:39:99:467,0,915 chr1 31644859 . G A 3121.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.392;ClippingRankSum=0.000;DP=260;ExcessHet=3.0103;FS=0.458;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.01;ReadPosRankSum=1.153;SOR=0.635 GT:AD:DP:GQ:PL 0/1:137,123:260:99:3150,0,3677 chr1 31652178 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 31652559 . C A 994.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.654;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=4.453;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.05;ReadPosRankSum=-1.053;SOR=0.350 GT:AD:DP:GQ:PL 0/1:42,48:90:99:1023,0,1210 chr1 31653830 . T C 1560.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.953;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=3.422;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.57;ReadPosRankSum=-0.539;SOR=0.425 GT:AD:DP:GQ:PL 0/1:55,60:115:99:1589,0,1459 chr1 31656563 . A G 554.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.126;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=5.573;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.53;ReadPosRankSum=-0.963;SOR=0.160 GT:AD:DP:GQ:PL 0/1:20,21:41:99:583,0,610 chr1 31658200 . T C 100.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.16;ReadPosRankSum=-1.139;SOR=1.112 GT:AD:DP:GQ:PL 0/1:7,4:11:99:129,0,259 chr1 31665562 . C G 3002.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.865;ClippingRankSum=0.000;DP=252;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.96;ReadPosRankSum=0.134;SOR=0.678 GT:AD:DP:GQ:PL 0/1:128,123:251:99:3031,0,3430 chr1 31666718 . G A 77.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=-0.253;SOR=1.447 GT:AD:DP:GQ:PL 0/1:1,4:5:27:106,0,27 chr1 31668890 . C G 320.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.742;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.34;ReadPosRankSum=0.628;SOR=0.387 GT:AD:DP:GQ:PL 0/1:13,13:26:99:349,0,365 chr1 31670567 . G C 2238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.876;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=17.750;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.46;ReadPosRankSum=-1.486;SOR=0.149 GT:AD:DP:GQ:PL 0/1:52,84:136:99:2267,0,1406 chr1 31670797 . G A 917.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.040;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.55;ReadPosRankSum=0.813;SOR=0.631 GT:AD:DP:GQ:PL 0/1:50,37:87:99:946,0,1470 chr1 31670936 . A C 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=0.549;SOR=3.056 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,167 chr1 31671009 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 31671394 . A G 562.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.113;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=2.462;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.40;ReadPosRankSum=0.221;SOR=0.201 GT:AD:DP:GQ:PL 0/1:24,18:42:99:591,0,830 chr1 31671909 . T C 169.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.904;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.49;ReadPosRankSum=-1.446;SOR=0.255 GT:AD:DP:GQ:PL 0/1:13,7:20:99:198,0,483 chr1 31674704 . C T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 31675132 . C T 3976.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.019;ClippingRankSum=0.000;DP=275;ExcessHet=3.0103;FS=2.037;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=-0.288;SOR=0.826 GT:AD:DP:GQ:PL 0/1:136,139:275:99:4005,0,4041 chr1 31679408 . C T 5510.77 PASS AC=2;AF=1.00;AN=2;DP=166;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.20;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,166:166:99:5539,497,0 chr1 31680464 . A G 264.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.37;ReadPosRankSum=-0.136;SOR=1.179 GT:AD:DP:GQ:PL 0/1:5,8:13:99:293,0,170 chr1 31680824 . C T 3455.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.55;SOR=1.542 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3484,309,0 chr1 31681163 . C T 477.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.13;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:506,42,0 chr1 31682970 . A G 6939.77 PASS AC=2;AF=1.00;AN=2;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.69;SOR=0.924 GT:AD:DP:GQ:PL 1/1:0,219:219:99:6968,657,0 chr1 31684381 . A T 185.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.270;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=4.415;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.29;ReadPosRankSum=1.199;SOR=0.493 GT:AD:DP:GQ:PL 0/1:11,9:20:99:214,0,330 chr1 31686917 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 31689049 . C A 2431.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.143;ClippingRankSum=0.000;DP=148;ExcessHet=3.0103;FS=0.643;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.43;ReadPosRankSum=-0.729;SOR=0.796 GT:AD:DP:GQ:PL 0/1:62,86:148:99:2460,0,1636 chr1 31689555 . C G 690.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.290;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.170;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.79;ReadPosRankSum=0.110;SOR=0.463 GT:AD:DP:GQ:PL 0/1:28,26:54:99:719,0,768 chr1 31689683 . T C 4084.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.04;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,120:120:99:4113,360,0 chr1 31690310 . G T 1155.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.02;SOR=2.649 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1184,105,0 chr1 31690328 . G A 798.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.845;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.36;ReadPosRankSum=0.818;SOR=0.871 GT:AD:DP:GQ:PL 0/1:18,28:46:99:827,0,443 chr1 31691121 . G A 2355.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.745;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=0.670;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.00;ReadPosRankSum=1.617;SOR=0.611 GT:AD:DP:GQ:PL 0/1:70,87:157:99:2384,0,2004 chr1 31691268 . A T 12265.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.199;ClippingRankSum=0.000;DP=388;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.61;ReadPosRankSum=2.506;SOR=0.746 GT:AD:DP:GQ:PL 1/1:2,386:388:99:12294,1115,0 chr1 31691930 . T C 1666.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.642;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=3.481;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.77;ReadPosRankSum=0.125;SOR=1.045 GT:AD:DP:GQ:PL 0/1:60,61:121:99:1695,0,1502 chr1 31692773 . T C 12905.77 PASS AC=2;AF=1.00;AN=2;DP=398;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.51;SOR=1.089 GT:AD:DP:GQ:PL 1/1:0,397:397:99:12934,1192,0 chr1 31692890 . A G 1805.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.685;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=7.026;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.22;ReadPosRankSum=-1.236;SOR=0.261 GT:AD:DP:GQ:PL 0/1:61,66:127:99:1834,0,1927 chr1 31693257 . C T 1602.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.504;ClippingRankSum=0.000;DP=145;ExcessHet=3.0103;FS=2.612;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.21;ReadPosRankSum=-0.485;SOR=0.339 GT:AD:DP:GQ:PL 0/1:76,67:143:99:1631,0,2095 chr1 31693987 . A C 4730.77 PASS AC=2;AF=1.00;AN=2;DP=150;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.54;SOR=1.288 GT:AD:DP:GQ:PL 1/1:0,150:150:99:4759,450,0 chr1 31695317 . A G 6708.77 PASS AC=2;AF=1.00;AN=2;DP=204;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.89;SOR=2.016 GT:AD:DP:GQ:PL 1/1:0,204:204:99:6737,612,0 chr1 31695431 . C G 534.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.019;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.21;ReadPosRankSum=0.144;SOR=0.223 GT:AD:DP:GQ:PL 0/1:16,17:33:99:563,0,462 chr1 31696341 . T C 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=1.150;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:256,0,170 chr1 31698349 . G C 4733.77 PASS AC=2;AF=1.00;AN=2;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.60;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,119:119:99:4762,358,0 chr1 31698605 . T G 4976.77 PASS AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.86;SOR=1.691 GT:AD:DP:GQ:PL 1/1:0,147:147:99:5005,442,0 chr1 31699606 . C T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.674;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 31699894 . G T 2617.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.184;ClippingRankSum=0.000;DP=200;ExcessHet=3.0103;FS=2.567;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=-0.077;SOR=0.899 GT:AD:DP:GQ:PL 0/1:108,92:200:99:2646,0,3194 chr1 31701925 . G C 5147.77 PASS AC=2;AF=1.00;AN=2;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.83;SOR=2.968 GT:AD:DP:GQ:PL 1/1:0,141:141:99:5176,423,0 chr1 31702090 . G A 5538.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.109;ClippingRankSum=0.000;DP=412;ExcessHet=3.0103;FS=1.088;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=-1.035;SOR=0.795 GT:AD:DP:GQ:PL 0/1:208,204:412:99:5567,0,5723 chr1 31707657 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 31707700 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 31709880 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 31728046 . T C 2174.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.13;SOR=1.888 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2203,186,0 chr1 31731046 . C G 2238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.372;ClippingRankSum=0.000;DP=167;ExcessHet=3.0103;FS=9.401;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=-0.555;SOR=1.315 GT:AD:DP:GQ:PL 0/1:86,81:167:99:2267,0,2170 chr1 31731067 . C G 1686.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.243;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=0.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=0.066;SOR=0.803 GT:AD:DP:GQ:PL 0/1:72,59:131:99:1715,0,2158 chr1 31731656 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 31738613 . A G 2506.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.729;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=1.146;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.62;ReadPosRankSum=0.743;SOR=0.829 GT:AD:DP:GQ:PL 0/1:92,92:184:99:2535,0,2431 chr1 31739082 . A G 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=-0.328;SOR=1.492 GT:AD:DP:GQ:PL 0/1:3,4:7:99:108,0,104 chr1 31741980 . T G 5090.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.276;ClippingRankSum=0.000;DP=393;ExcessHet=3.0103;FS=0.367;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=1.305;SOR=0.730 GT:AD:DP:GQ:PL 0/1:207,186:393:99:5119,0,5775 chr1 31755908 . A G 408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.224;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.03;ReadPosRankSum=1.876;SOR=0.874 GT:AD:DP:GQ:PL 0/1:11,13:24:99:437,0,353 chr1 31763239 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 31790485 . T C 1114.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.20;SOR=3.841 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1143,87,0 chr1 31800425 . A G 8521.77 PASS AC=2;AF=1.00;AN=2;DP=267;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.92;SOR=0.897 GT:AD:DP:GQ:PL 1/1:0,267:267:99:8550,800,0 chr1 31814028 . G A 1532.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.06;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1561,135,0 chr1 31815009 . T C 8699.77 PASS AC=2;AF=1.00;AN=2;DP=271;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.10;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,271:271:99:8728,812,0 chr1 31852056 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.91;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 31869936 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 31910145 . A G 1632.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.939;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.17;ReadPosRankSum=0.864;SOR=0.688 GT:AD:DP:GQ:PL 0/1:57,67:124:99:1661,0,1427 chr1 31944881 . G T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 32073181 . G A 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.354;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.282;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.84;ReadPosRankSum=0.428;SOR=1.609 GT:AD:DP:GQ:PL 0/1:11,9:20:99:125,0,351 chr1 32161782 . C G 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.22;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 32166012 . A C 411.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.20;ReadPosRankSum=-0.099;SOR=0.404 GT:AD:DP:GQ:PL 0/1:16,13:29:99:449,0,630 chr1 32166036 . C A 862.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.410;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=5.714;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.28;ReadPosRankSum=1.939;SOR=2.276 GT:AD:DP:GQ:PL 0/1:25,28:53:99:900,0,855 chr1 32181634 . G A 1116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.347;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=1.872;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.29;ReadPosRankSum=0.351;SOR=0.997 GT:AD:DP:GQ:PL 0/1:41,43:84:99:1145,0,1181 chr1 32220993 . A G 884.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.498;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.80;ReadPosRankSum=-1.001;SOR=0.624 GT:AD:DP:GQ:PL 0/1:29,27:56:99:913,0,1005 chr1 32224256 . A G 3384.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.490;ClippingRankSum=0.000;DP=211;ExcessHet=3.0103;FS=6.651;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.04;ReadPosRankSum=0.297;SOR=1.023 GT:AD:DP:GQ:PL 0/1:102,109:211:99:3413,0,2886 chr1 32224690 . G T 170.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.18;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:199,15,0 chr1 32233626 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 32253179 . G A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 32316874 . A G 931.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.334;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.53;ReadPosRankSum=0.343;SOR=0.688 GT:AD:DP:GQ:PL 0/1:25,35:60:99:960,0,643 chr1 32334197 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 32334235 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 32334236 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 32334240 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 32334242 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 32334245 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 32334249 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 32334260 . C G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:36:81,0,36 chr1 32334261 . T A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:36:81,0,36 chr1 32334287 . A C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.967;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,78 chr1 32334291 . A G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.967;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,78 chr1 32334295 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,78 chr1 32334302 . A C 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.94;ReadPosRankSum=-0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:75:120,0,75 chr1 32334310 . G A 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.645;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.35;ReadPosRankSum=-1.645;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:75:120,0,75 chr1 32334316 . A C 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.79;ReadPosRankSum=-0.598;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:117,0,117 chr1 32334317 . C T 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.79;ReadPosRankSum=-0.598;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:117,0,117 chr1 32334318 . A C 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.960;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.79;ReadPosRankSum=-0.598;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:117,0,117 chr1 32334324 . G A 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.150;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.79;ReadPosRankSum=-1.150;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:117,0,117 chr1 32335086 . G A 755.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.942;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=3.425;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.00;ReadPosRankSum=-0.242;SOR=0.379 GT:AD:DP:GQ:PL 0/1:34,29:63:99:784,0,875 chr1 32365942 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 32394560 . T C 3198.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.83;SOR=2.910 GT:AD:DP:GQ:PL 1/1:0,91:91:99:3227,273,0 chr1 32471497 . G A 9888.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.608;ClippingRankSum=0.000;DP=781;ExcessHet=3.0103;FS=1.107;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.68;ReadPosRankSum=1.176;SOR=0.597 GT:AD:DP:GQ:PL 0/1:401,379:780:99:9917,0,10837 chr1 32536061 . C A 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-0.241;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr1 32536465 . C T 58.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.53;ReadPosRankSum=0.751;SOR=0.959 GT:AD:DP:GQ:PL 0/1:6,3:9:87:87,0,182 chr1 32592748 . C T 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.38;ReadPosRankSum=0.842;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,8:10:53:292,0,53 chr1 32611578 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 32611593 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 32634036 . A G 277.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.432;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=3.452;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.96;ReadPosRankSum=-0.353;SOR=1.508 GT:AD:DP:GQ:PL 0/1:19,12:31:99:306,0,503 chr1 32634197 . A G 288.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.042;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.04;ReadPosRankSum=-0.520;SOR=1.347 GT:AD:DP:GQ:PL 0/1:9,9:18:99:317,0,254 chr1 32643436 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 32650943 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 32651022 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 32651470 . T G 1614.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.36;SOR=1.659 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1643,141,0 chr1 32651630 . G A 932.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.07;SOR=2.200 GT:AD:DP:GQ:PL 1/1:0,21:21:66:961,66,0 chr1 32651632 . G A 486.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=5.102;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.13;ReadPosRankSum=-0.826;SOR=2.235 GT:AD:DP:GQ:PL 0/1:8,14:22:99:515,0,268 chr1 32657378 . G A 811.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.497;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.861;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.499;SOR=0.530 GT:AD:DP:GQ:PL 0/1:49,36:85:99:840,0,1271 chr1 32657644 . A C 869.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.340;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=6.857;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.91;ReadPosRankSum=1.600;SOR=1.550 GT:AD:DP:GQ:PL 0/1:41,32:73:99:898,0,1107 chr1 32662129 . T C 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr1 32668367 . T C 1408.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.35;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1437,144,0 chr1 32669173 . A C 294.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.201;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.166;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.90;ReadPosRankSum=-1.942;SOR=0.906 GT:AD:DP:GQ:PL 0/1:35,15:50:99:323,0,933 chr1 32669222 . T C 684.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.172;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.46;ReadPosRankSum=-0.281;SOR=0.504 GT:AD:DP:GQ:PL 0/1:6,22:28:99:713,0,132 chr1 32669264 . A C 530.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.730;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.27;ReadPosRankSum=-0.098;SOR=0.871 GT:AD:DP:GQ:PL 0/1:5,16:21:99:559,0,146 chr1 32669388 . A G 305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.582;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.400;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.56;ReadPosRankSum=-0.964;SOR=0.790 GT:AD:DP:GQ:PL 0/1:16,16:32:99:334,0,402 chr1 32672765 . C A 676.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.714;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=13.643;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.54;SOR=1.061 GT:AD:DP:GQ:PL 0/1:31,19:50:99:705,0,2012 chr1 32672915 . A C 2075.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.05;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2104,221,0 chr1 32673004 . T C 376.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.164;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.66;ReadPosRankSum=-0.107;SOR=0.586 GT:AD:DP:GQ:PL 0/1:22,17:39:99:405,0,631 chr1 32673442 . C T 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.238;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.398;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.07;ReadPosRankSum=-0.179;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,4:11:73:73,0,136 chr1 32680009 . G A 176.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.605;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.07;ReadPosRankSum=0.473;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:205,0,174 chr1 32681542 . C T 518.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.04;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:547,42,0 chr1 32681578 . A T 331.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.055;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.29;ReadPosRankSum=0.897;SOR=0.610 GT:AD:DP:GQ:PL 0/1:14,13:27:99:360,0,389 chr1 32695277 . C T 8348.77 PASS AC=2;AF=1.00;AN=2;DP=259;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.23;SOR=1.059 GT:AD:DP:GQ:PL 1/1:0,259:259:99:8377,778,0 chr1 32695611 . T C 6474.77 PASS AC=2;AF=1.00;AN=2;DP=195;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.20;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,195:195:99:6503,585,0 chr1 32696205 . C T 487.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.96;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:516,39,0 chr1 32702497 . G C 349.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.459;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=3.155;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.66;ReadPosRankSum=0.119;SOR=1.329 GT:AD:DP:GQ:PL 0/1:16,14:30:99:378,0,374 chr1 32703884 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 32712569 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 32715340 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 32715341 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 32716810 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 32745341 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 32745854 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 32753675 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 32767622 . C T 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.70;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 32767636 . G A 582.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.56;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:611,45,0 chr1 32767722 . A G 2268.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.65;SOR=2.694 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2297,192,0 chr1 32768535 . T C 2143.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.55;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2172,174,0 chr1 32768552 . G A 2663.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.647;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.22;ReadPosRankSum=0.906;SOR=1.954 GT:AD:DP:GQ:PL 1/1:1,75:76:99:2692,187,0 chr1 32770025 . G A 3127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.070;ClippingRankSum=0.000;DP=188;ExcessHet=3.0103;FS=1.814;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.64;ReadPosRankSum=0.342;SOR=0.540 GT:AD:DP:GQ:PL 0/1:84,104:188:99:3156,0,2464 chr1 32787286 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 32810823 . G A 5548.77 PASS AC=2;AF=1.00;AN=2;DP=174;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.89;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,174:174:99:5577,518,0 chr1 32823811 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 32828147 . T C 623.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.25;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:652,48,0 chr1 32834215 . A T 1404.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.77;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1433,114,0 chr1 32852960 . T C 3128.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.59;SOR=2.069 GT:AD:DP:GQ:PL 1/1:0,96:96:99:3157,288,0 chr1 32853033 . G A 5944.77 PASS AC=2;AF=1.00;AN=2;DP=190;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.62;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,188:188:99:5973,564,0 chr1 32863680 . G A 1837.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.752;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=0.756;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.44;ReadPosRankSum=1.982;SOR=0.570 GT:AD:DP:GQ:PL 0/1:54,65:119:99:1866,0,1424 chr1 32864831 . A G 5000.77 PASS AC=2;AF=1.00;AN=2;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.26;SOR=1.579 GT:AD:DP:GQ:PL 1/1:0,155:155:99:5029,465,0 chr1 32874437 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 32884582 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 32893000 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 32898494 . C T 599.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.04;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,16:16:48:628,48,0 chr1 32922515 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 32945414 . C T 1809.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.438;ClippingRankSum=0.000;DP=165;ExcessHet=3.0103;FS=4.044;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.97;ReadPosRankSum=-0.315;SOR=0.441 GT:AD:DP:GQ:PL 0/1:96,69:165:99:1838,0,2783 chr1 32948439 . G A 1491.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.673;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=6.265;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.94;ReadPosRankSum=-1.860;SOR=1.432 GT:AD:DP:GQ:PL 0/1:55,52:107:99:1520,0,1489 chr1 32964501 . T G 221.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.42;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:250,18,0 chr1 32964954 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 32982746 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 33010691 . A G 68.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.612;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=3.112;MLEAC=1;MLEAF=0.500;MQ=58.75;MQRankSum=-3.634;QD=2.64;ReadPosRankSum=-0.956;SOR=0.132 GT:AD:DP:GQ:PL 0/1:21,5:26:97:97,0,765 chr1 33012962 . C G 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=-1.409;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,140 chr1 33014763 . G A 715.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.005;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=3.103;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.27;ReadPosRankSum=-1.507;SOR=2.303 GT:AD:DP:GQ:PL 0/1:23,21:44:99:744,0,760 chr1 33020204 . C T 347.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.085;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.84;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,10:14:99:376,0,495 chr1 33031469 . G A 2313.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.67;SOR=2.869 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2342,192,0 chr1 33082167 . T C 1049.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.172;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=5.003;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=-0.341;SOR=0.307 GT:AD:DP:GQ:PL 0/1:33,39:72:99:1078,0,952 chr1 33082438 . C T 437.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.831;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=5.593;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.52;ReadPosRankSum=-0.945;SOR=2.621 GT:AD:DP:GQ:PL 0/1:24,14:38:99:466,0,804 chr1 33082461 . C T 242.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.209;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.969;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.56;ReadPosRankSum=0.448;SOR=1.802 GT:AD:DP:GQ:PL 0/1:13,8:21:99:271,0,446 chr1 33083923 . G A 5679.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.290;ClippingRankSum=0.000;DP=502;ExcessHet=3.0103;FS=0.536;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.34;ReadPosRankSum=0.976;SOR=0.621 GT:AD:DP:GQ:PL 0/1:275,226:501:99:5708,0,7571 chr1 33091903 . A T 468.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.970;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.02;ReadPosRankSum=1.463;SOR=1.022 GT:AD:DP:GQ:PL 0/1:24,15:39:99:497,0,827 chr1 33093391 . C A 2203.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.659;ClippingRankSum=0.000;DP=212;ExcessHet=3.0103;FS=1.702;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.44;ReadPosRankSum=-1.974;SOR=0.597 GT:AD:DP:GQ:PL 0/1:122,89:211:99:2232,0,3068 chr1 33093543 . T G 954.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.370;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=7.170;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.25;ReadPosRankSum=0.169;SOR=1.678 GT:AD:DP:GQ:PL 0/1:37,30:67:99:983,0,1220 chr1 33094419 . A C 1104.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.741;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=2.850;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.75;ReadPosRankSum=-0.113;SOR=0.420 GT:AD:DP:GQ:PL 0/1:52,42:94:99:1133,0,1549 chr1 33094737 . A G 5109.77 PASS AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=2.192 GT:AD:DP:GQ:PL 1/1:0,147:147:99:5138,441,0 chr1 33094904 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.23;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 33096914 . T G 959.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.481;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.00;ReadPosRankSum=0.591;SOR=0.569 GT:AD:DP:GQ:PL 0/1:34,30:64:99:988,0,1125 chr1 33135420 . C A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 33135516 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 33153038 . G C 46.88 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.63;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:16:75,0,16 chr1 33165468 . C A 433.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.104;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.10;ReadPosRankSum=-0.899;SOR=0.560 GT:AD:DP:GQ:PL 0/1:4,14:18:99:462,0,113 chr1 33169260 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 33172824 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 33176331 . A G 6806.77 PASS AC=2;AF=1.00;AN=2;DP=207;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.88;SOR=1.465 GT:AD:DP:GQ:PL 1/1:0,207:207:99:6835,622,0 chr1 33176551 . C T 1310.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.588;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.65;ReadPosRankSum=-0.356;SOR=0.800 GT:AD:DP:GQ:PL 0/1:48,48:96:99:1339,0,1385 chr1 33178198 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 33180896 . T C 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.389;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=6.113;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.41;ReadPosRankSum=-2.198;SOR=2.833 GT:AD:DP:GQ:PL 0/1:6,8:14:99:286,0,184 chr1 33181349 . A G 1375.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.453;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=9.956;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.64;ReadPosRankSum=-0.645;SOR=0.388 GT:AD:DP:GQ:PL 0/1:46,48:94:99:1404,0,1186 chr1 33270844 . G A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 33275986 . C T 585.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.529;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=1.387;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.46;ReadPosRankSum=-1.346;SOR=0.456 GT:AD:DP:GQ:PL 0/1:34,22:56:99:614,0,1081 chr1 33276627 . T C 1307.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.62;SOR=2.649 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1336,105,0 chr1 33276735 . A G 278.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.98;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:307,27,0 chr1 33280562 . T C 908.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.57;SOR=3.528 GT:AD:DP:GQ:PL 1/1:0,25:25:75:937,75,0 chr1 33295142 . T C 2157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.578;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=10.337;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.62;ReadPosRankSum=0.868;SOR=1.299 GT:AD:DP:GQ:PL 0/1:91,80:171:99:2186,0,2408 chr1 33297674 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 33311709 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 33311923 . T C 3357.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.26;SOR=3.209 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3386,277,0 chr1 33312462 . G A 1589.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.290;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=3.247;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.62;ReadPosRankSum=-0.106;SOR=1.044 GT:AD:DP:GQ:PL 0/1:62,64:126:99:1618,0,1701 chr1 33312625 . G A 1178.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.079;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=0.817;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.87;ReadPosRankSum=-0.871;SOR=0.582 GT:AD:DP:GQ:PL 0/1:44,41:85:99:1207,0,1311 chr1 33312990 . T C 571.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.17;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,16:16:48:600,48,0 chr1 33318545 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 33324895 . G A 1284.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.278;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=5.255;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.90;ReadPosRankSum=-0.394;SOR=0.285 GT:AD:DP:GQ:PL 0/1:31,45:76:99:1313,0,966 chr1 33329251 . C T 443.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.889;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.44;ReadPosRankSum=-0.451;SOR=0.765 GT:AD:DP:GQ:PL 0/1:13,14:27:99:472,0,459 chr1 33329252 . A G 1102.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.50;SOR=6.593 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1131,78,0 chr1 33329930 . G C 486.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.13;ReadPosRankSum=-0.119;SOR=1.329 GT:AD:DP:GQ:PL 0/1:8,14:22:99:515,0,268 chr1 33330480 . A C 170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.05;ReadPosRankSum=1.117;SOR=0.293 GT:AD:DP:GQ:PL 0/1:11,6:17:99:199,0,404 chr1 33333947 . C T 421.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.81;ReadPosRankSum=-0.555;SOR=1.739 GT:AD:DP:GQ:PL 0/1:5,12:17:99:450,0,158 chr1 33334299 . G A 1240.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.133;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=3.752;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.77;ReadPosRankSum=-0.066;SOR=1.261 GT:AD:DP:GQ:PL 0/1:41,43:84:99:1269,0,1221 chr1 33340862 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 33354229 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 33354533 . C T 2069.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.371;ClippingRankSum=0.000;DP=170;ExcessHet=3.0103;FS=0.575;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.18;ReadPosRankSum=-0.613;SOR=0.635 GT:AD:DP:GQ:PL 0/1:94,76:170:99:2098,0,2618 chr1 33367264 . A G 5006.77 PASS AC=2;AF=1.00;AN=2;DP=149;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.60;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,149:149:99:5035,448,0 chr1 33368393 . G A 126.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.487;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.05;ReadPosRankSum=0.922;SOR=1.022 GT:AD:DP:GQ:PL 0/1:9,5:14:99:155,0,300 chr1 33368854 . A G 1262.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.57;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1291,117,0 chr1 33371195 . C G 3039.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.15;SOR=2.276 GT:AD:DP:GQ:PL 1/1:0,89:89:99:3068,267,0 chr1 33376668 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 33430931 . C G 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.253;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr1 33444852 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 33479591 . T A 1073.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.686;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=1.648;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.53;ReadPosRankSum=0.731;SOR=0.917 GT:AD:DP:GQ:PL 0/1:60,42:102:99:1102,0,1869 chr1 33488752 . A G 593.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.93;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:51:622,51,0 chr1 33491552 . T G 9801.77 PASS AC=2;AF=1.00;AN=2;DP=299;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.78;SOR=0.921 GT:AD:DP:GQ:PL 1/1:0,299:299:99:9830,896,0 chr1 33492278 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 33494462 . A G 4079.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.90;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,124:124:99:4108,371,0 chr1 33495547 . T G 1848.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.24;SOR=2.480 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1877,162,0 chr1 33519387 . G A 48.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.150;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.06;ReadPosRankSum=0.017;SOR=0.148 GT:AD:DP:GQ:PL 0/1:9,3:12:77:77,0,340 chr1 33519753 . C G 12707.77 PASS AC=2;AF=1.00;AN=2;DP=384;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=0.932 GT:AD:DP:GQ:PL 1/1:0,379:379:99:12736,1138,0 chr1 33525329 . A T 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.19;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:69:69,0,71 chr1 33533530 . G C 959.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.178;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.43;ReadPosRankSum=-0.512;SOR=0.740 GT:AD:DP:GQ:PL 0/1:47,37:84:99:988,0,1439 chr1 33546360 . T C 973.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.621;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.08;ReadPosRankSum=-0.418;SOR=0.719 GT:AD:DP:GQ:PL 0/1:21,36:57:99:1002,0,592 chr1 33557653 . C T 132.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.273;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.85;ReadPosRankSum=1.415;SOR=0.260 GT:AD:DP:GQ:PL 0/1:10,5:15:99:161,0,385 chr1 33558030 . A G 1264.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.743;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.24;ReadPosRankSum=-0.305;SOR=0.724 GT:AD:DP:GQ:PL 0/1:41,42:83:99:1293,0,1132 chr1 33558149 . T C 438.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.61;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:467,36,0 chr1 33558179 . A G 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-1.068;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,154 chr1 33558967 . C T 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 33572614 . T C 940.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.601;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.25;ReadPosRankSum=1.204;SOR=1.138 GT:AD:DP:GQ:PL 0/1:37,34:71:99:969,0,859 chr1 33572813 . A C 573.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.355;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=2.733;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.49;ReadPosRankSum=-1.155;SOR=0.124 GT:AD:DP:GQ:PL 0/1:10,18:28:99:602,0,302 chr1 33572868 . T C 248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.64;ReadPosRankSum=-0.812;SOR=2.093 GT:AD:DP:GQ:PL 0/1:2,7:9:99:277,0,127 chr1 33576217 . C G 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr1 33576286 . C G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 33576310 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 33576994 . C G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 33577034 . G A 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=-0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr1 33577210 . A G 1098.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.954;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=3.502;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.65;ReadPosRankSum=-0.843;SOR=1.211 GT:AD:DP:GQ:PL 0/1:31,35:66:99:1127,0,775 chr1 33581046 . C A 627.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.62;ReadPosRankSum=2.173;SOR=0.307 GT:AD:DP:GQ:PL 0/1:14,18:32:99:656,0,488 chr1 33586803 . A G 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.71;ReadPosRankSum=0.586;SOR=0.399 GT:AD:DP:GQ:PL 0/1:4,7:11:99:256,0,134 chr1 33587005 . A G 310.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.728;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=2.944;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.95;ReadPosRankSum=-1.493;SOR=1.765 GT:AD:DP:GQ:PL 0/1:16,10:26:99:339,0,522 chr1 33592742 . T G 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=-0.210;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,140 chr1 33605226 . G A 681.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.219;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.48;ReadPosRankSum=-0.379;SOR=0.859 GT:AD:DP:GQ:PL 0/1:18,21:39:99:710,0,600 chr1 33605834 . C T 936.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.758;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=3.770;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.09;ReadPosRankSum=-0.618;SOR=1.120 GT:AD:DP:GQ:PL 0/1:62,41:103:99:965,0,1709 chr1 33605925 . C T 1021.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.191;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=1.516;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.73;ReadPosRankSum=0.338;SOR=0.551 GT:AD:DP:GQ:PL 0/1:73,44:117:99:1050,0,1963 chr1 33606265 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 33611432 . G T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr1 33616679 . G A 313.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.239;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.55;ReadPosRankSum=-1.228;SOR=0.387 GT:AD:DP:GQ:PL 0/1:15,10:25:99:342,0,526 chr1 33625991 . T C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 33633359 . C G 548.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.554;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=2.625;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.87;ReadPosRankSum=-0.872;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,18:24:99:577,0,178 chr1 33646703 . G A 2192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.073;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.83;ReadPosRankSum=-0.633;SOR=0.622 GT:AD:DP:GQ:PL 0/1:49,74:123:99:2221,0,1357 chr1 33671068 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 33691728 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 33692872 . C T 3760.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.288;ClippingRankSum=0.000;DP=203;ExcessHet=3.0103;FS=1.912;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.62;ReadPosRankSum=0.637;SOR=0.850 GT:AD:DP:GQ:PL 0/1:106,96:202:99:3789,0,5977 chr1 33692882 . C T 4132.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.916;ClippingRankSum=0.000;DP=229;ExcessHet=3.0103;FS=1.107;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.13;ReadPosRankSum=-1.134;SOR=0.580 GT:AD:DP:GQ:PL 0/1:114,114:228:99:4161,0,6129 chr1 33698686 . A G 874.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.007;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.44;ReadPosRankSum=-0.272;SOR=2.049 GT:AD:DP:GQ:PL 0/1:20,25:45:99:903,0,649 chr1 33723829 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.674;SOR=2.833 GT:AD:DP:GQ:PL 0/1:2,3:5:66:110,0,66 chr1 33723893 . C T 168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.88;ReadPosRankSum=1.255;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:197,0,137 chr1 33723952 . C T 519.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.152;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.99;ReadPosRankSum=-0.581;SOR=1.051 GT:AD:DP:GQ:PL 0/1:11,15:26:99:548,0,335 chr1 33724317 . C T 2785.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.468;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=10.019;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=1.148;SOR=1.322 GT:AD:DP:GQ:PL 0/1:105,100:205:99:2814,0,2940 chr1 33739464 . C T 1147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.138;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=8.165;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.17;ReadPosRankSum=1.319;SOR=1.813 GT:AD:DP:GQ:PL 0/1:43,38:81:99:1176,0,1317 chr1 33739533 . C T 490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.723;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=3.023;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.18;ReadPosRankSum=0.313;SOR=0.160 GT:AD:DP:GQ:PL 0/1:11,16:27:99:519,0,371 chr1 33772682 . T C 2308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.723;ClippingRankSum=0.000;DP=187;ExcessHet=3.0103;FS=5.153;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.35;ReadPosRankSum=1.355;SOR=1.042 GT:AD:DP:GQ:PL 0/1:98,89:187:99:2337,0,2544 chr1 33795666 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 33798877 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 33804897 . G A 1991.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.65;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2020,183,0 chr1 33819741 . G A 2587.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.030;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=1.756;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.56;ReadPosRankSum=-0.982;SOR=0.856 GT:AD:DP:GQ:PL 0/1:111,95:206:99:2616,0,2968 chr1 33819780 . C T 3143.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.850;ClippingRankSum=0.000;DP=255;ExcessHet=3.0103;FS=0.455;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.33;ReadPosRankSum=-0.101;SOR=0.658 GT:AD:DP:GQ:PL 0/1:132,123:255:99:3172,0,3374 chr1 33820115 . G A 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-1.282;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 33820394 . G A 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.225;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=5.531;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.14;ReadPosRankSum=1.241;SOR=2.636 GT:AD:DP:GQ:PL 0/1:19,8:27:99:221,0,577 chr1 33820588 . A C 91.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.960;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.17;ReadPosRankSum=1.036;SOR=0.132 GT:AD:DP:GQ:PL 0/1:6,4:10:99:129,0,162 chr1 33823530 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 33823531 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 33825139 . T C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 33825172 . T C 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:65:123,0,65 chr1 33825174 . A C 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:65:123,0,65 chr1 33836585 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 33836664 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 33836719 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 33837467 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 33837469 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 33846578 . C G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.02;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 33864296 . T C 3416.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.17;SOR=1.755 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3445,300,0 chr1 33864466 . A C 8724.77 PASS AC=2;AF=1.00;AN=2;DP=258;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.82;SOR=1.113 GT:AD:DP:GQ:PL 1/1:0,258:258:99:8753,775,0 chr1 33864944 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.04;QD=28.75;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 33864954 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.66;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 33866698 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 33896230 . G A 65.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:93,9,0 chr1 33918061 . T C 3138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.134;ClippingRankSum=0.000;DP=267;ExcessHet=3.0103;FS=0.453;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.80;ReadPosRankSum=-0.865;SOR=0.660 GT:AD:DP:GQ:PL 0/1:143,123:266:99:3167,0,3787 chr1 33919093 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 33919094 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 33973280 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 33984839 . G C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.253;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=-1.282;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,126 chr1 33984864 . C A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.253;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=-0.524;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,125 chr1 34012883 . G T 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 34039799 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 34128255 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 34129380 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 34165500 . C T 304.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.459;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.70;ReadPosRankSum=0.419;SOR=0.412 GT:AD:DP:GQ:PL 0/1:14,10:24:99:333,0,478 chr1 34189785 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 34197607 . C G 5310.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.010;ClippingRankSum=0.000;DP=418;ExcessHet=3.0103;FS=1.100;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.83;ReadPosRankSum=-1.429;SOR=0.806 GT:AD:DP:GQ:PL 0/1:216,198:414:99:5339,0,6139 chr1 34197810 . C G 2821.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.570;ClippingRankSum=0.000;DP=187;ExcessHet=3.0103;FS=1.928;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.09;ReadPosRankSum=0.250;SOR=0.556 GT:AD:DP:GQ:PL 0/1:89,98:187:99:2850,0,2471 chr1 34198017 . G A 449.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.148;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.604;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.06;ReadPosRankSum=1.562;SOR=0.368 GT:AD:DP:GQ:PL 0/1:15,17:32:99:478,0,462 chr1 34198082 . G A 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.691;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.48;ReadPosRankSum=0.104;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,8:12:92:298,0,92 chr1 34198098 . T G 233.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.38;ReadPosRankSum=-0.385;SOR=1.863 GT:AD:DP:GQ:PL 0/1:3,7:10:61:262,0,61 chr1 34202262 . C A 1690.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.374;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.58;ReadPosRankSum=-0.809;SOR=0.649 GT:AD:DP:GQ:PL 0/1:81,65:146:99:1719,0,2199 chr1 34208100 . A C 4484.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.341;ClippingRankSum=0.000;DP=373;ExcessHet=3.0103;FS=7.530;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=0.475;SOR=0.628 GT:AD:DP:GQ:PL 0/1:200,172:372:99:4513,0,5470 chr1 34209578 . C T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.431;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 34218862 . G A 1239.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.83;SOR=2.235 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1268,99,0 chr1 34219020 . A G 134.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.98;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:163,15,0 chr1 34229383 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 34339812 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 34369536 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 34369540 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 34436636 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.33;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr1 34436645 . G C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 34441547 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 34494284 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 34519379 . A T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 34614057 . A G 61.96 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=12.39;ReadPosRankSum=-0.524;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,4:5:5:89,5,0 chr1 34718237 . A C 934.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.918;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=2.128;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.26;ReadPosRankSum=0.275;SOR=0.967 GT:AD:DP:GQ:PL 0/1:49,34:83:99:972,0,1432 chr1 34718432 . C T 1797.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.336;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=0.599;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.38;ReadPosRankSum=-0.673;SOR=0.797 GT:AD:DP:GQ:PL 0/1:84,74:158:99:1826,0,2317 chr1 34718483 . C T 1188.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.697;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=7.318;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=-0.085;SOR=1.476 GT:AD:DP:GQ:PL 0/1:59,43:102:99:1217,0,1612 chr1 34718571 . A T 346.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.420;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.51;ReadPosRankSum=-0.353;SOR=1.179 GT:AD:DP:GQ:PL 0/1:23,10:33:99:375,0,933 chr1 34718607 . T C 87.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.736;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.75;ReadPosRankSum=-2.034;SOR=0.804 GT:AD:DP:GQ:PL 0/1:9,4:13:99:116,0,303 chr1 34732757 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 34740591 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 34740601 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 34757744 . G A 2722.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.756;ClippingRankSum=0.000;DP=172;ExcessHet=3.0103;FS=4.492;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.92;ReadPosRankSum=1.541;SOR=0.441 GT:AD:DP:GQ:PL 0/1:80,91:171:99:2751,0,2422 chr1 34758280 . G A 473.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.455;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=2.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.15;ReadPosRankSum=-0.636;SOR=1.201 GT:AD:DP:GQ:PL 0/1:23,16:39:99:502,0,797 chr1 34781052 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 34785560 . C T 1327.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.846;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.834;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.28;ReadPosRankSum=0.853;SOR=0.818 GT:AD:DP:GQ:PL 0/1:43,50:93:99:1356,0,1210 chr1 34785628 . G A 523.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.352;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=-0.553;SOR=0.804 GT:AD:DP:GQ:PL 0/1:21,18:39:99:552,0,658 chr1 34794360 . A G 3781.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.934;ClippingRankSum=0.000;DP=332;ExcessHet=3.0103;FS=4.220;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.43;ReadPosRankSum=-0.409;SOR=0.842 GT:AD:DP:GQ:PL 0/1:185,146:331:99:3810,0,4843 chr1 34795168 . C T 2983.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.389;ClippingRankSum=0.000;DP=255;ExcessHet=3.0103;FS=2.870;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.79;ReadPosRankSum=-1.806;SOR=0.535 GT:AD:DP:GQ:PL 0/1:140,113:253:99:3012,0,3782 chr1 34795328 . G A 1313.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.789;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=1.233;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.42;ReadPosRankSum=0.811;SOR=0.960 GT:AD:DP:GQ:PL 0/1:39,41:80:99:1342,0,1212 chr1 34825351 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 34828702 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 34855641 . A C 3826.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.405;ClippingRankSum=0.000;DP=296;ExcessHet=3.0103;FS=3.141;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.93;ReadPosRankSum=1.554;SOR=0.581 GT:AD:DP:GQ:PL 0/1:152,144:296:99:3855,0,4167 chr1 34866472 . G C 125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.97;ReadPosRankSum=-0.366;SOR=0.527 GT:AD:DP:GQ:PL 0/1:2,5:7:62:154,0,62 chr1 34866781 . G A 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.69;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:59:59,0,72 chr1 34867525 . T C 4876.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.096;ClippingRankSum=0.000;DP=381;ExcessHet=3.0103;FS=3.889;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.80;ReadPosRankSum=0.820;SOR=0.524 GT:AD:DP:GQ:PL 0/1:196,185:381:99:4905,0,5032 chr1 34898108 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 34899364 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 34900455 . C T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:93:107,0,93 chr1 34905689 . C T 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=-0.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr1 35095909 . G A 827.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.56;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,28:28:84:856,84,0 chr1 35097364 . G A 2608.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.21;SOR=1.193 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2637,243,0 chr1 35097605 . C G 1575.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1604,138,0 chr1 35110544 . C T 687.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.10;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,18:18:54:716,54,0 chr1 35155889 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 35158959 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 35240764 . A C 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 35335747 . C A 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr1 35337080 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 35450143 . A G 1207.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.456;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=3.431;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.76;ReadPosRankSum=-0.811;SOR=1.565 GT:AD:DP:GQ:PL 0/1:31,37:68:99:1236,0,984 chr1 35460260 . C A 3005.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.64;SOR=1.227 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3034,285,0 chr1 35636129 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.31;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 35641649 . G C 1797.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.52;SOR=7.614 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1826,132,0 chr1 35641909 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 35716538 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 35719374 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 35721797 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 35738119 . T A 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.316;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.933;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.30;SOR=2.093 GT:AD:DP:GQ:PL 0/1:11,5:16:65:65,0,221 chr1 35738121 . T A 176.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.386;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.40;ReadPosRankSum=1.292;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,9:17:99:205,0,206 chr1 35739565 . A G 978.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.75;SOR=2.546 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1007,87,0 chr1 35748111 . G T 1515.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.21;SOR=2.780 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1544,126,0 chr1 35789212 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 35816816 . A G 1187.73 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.82;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1225,131,0 chr1 35850703 . G C 372.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.32;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:401,30,0 chr1 35850970 . A C 9537.77 PASS AC=2;AF=1.00;AN=2;DP=307;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.27;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,305:305:99:9566,915,0 chr1 36054790 . T G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.89;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 36086294 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 36088072 . A G 11108.77 PASS AC=2;AF=1.00;AN=2;DP=341;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.67;SOR=1.015 GT:AD:DP:GQ:PL 1/1:0,340:340:99:11137,1020,0 chr1 36088235 . A C 863.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.381;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=8.818;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.71;ReadPosRankSum=0.299;SOR=1.400 GT:AD:DP:GQ:PL 0/1:31,32:63:99:892,0,832 chr1 36088841 . G C 2221.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.18;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,55:55:99:2250,166,0 chr1 36097557 . C A 3724.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.86;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3753,328,0 chr1 36099983 . C G 2141.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.95;SOR=1.999 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2170,195,0 chr1 36100016 . G A 2727.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=1.450 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2756,255,0 chr1 36100398 . A G 1433.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.36;SOR=5.728 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1462,105,0 chr1 36116191 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 36116377 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 36132613 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 36133946 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 36137342 . C T 3291.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.06;SOR=2.621 GT:AD:DP:GQ:PL 1/1:0,94:94:99:3320,282,0 chr1 36137564 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 36137689 . C T 944.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.58;SOR=2.226 GT:AD:DP:GQ:PL 1/1:0,29:29:87:973,87,0 chr1 36149112 . C G 598.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.72;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:627,45,0 chr1 36150068 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 36156549 . G A 402.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.948;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=6.239;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.49;ReadPosRankSum=1.498;SOR=1.492 GT:AD:DP:GQ:PL 0/1:13,13:26:99:431,0,397 chr1 36157129 . T C 131.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:160,15,0 chr1 36157269 . C G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.44;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 36157302 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 36166450 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 36176128 . C T 907.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.42;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,28:28:83:936,83,0 chr1 36176819 . T C 3655.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.64;SOR=1.807 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3684,336,0 chr1 36177390 . C T 794.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.39;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:823,60,0 chr1 36179901 . C T 3424.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.145;ClippingRankSum=0.000;DP=252;ExcessHet=3.0103;FS=0.975;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=0.556;SOR=0.778 GT:AD:DP:GQ:PL 0/1:123,129:252:99:3453,0,3242 chr1 36187939 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 36188076 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 36188116 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 36242250 . G C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 36264135 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 36286832 . C T 7972.77 PASS AC=2;AF=1.00;AN=2;DP=232;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.37;SOR=1.028 GT:AD:DP:GQ:PL 1/1:0,232:232:99:8001,696,0 chr1 36288866 . G C 1222.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1251,106,0 chr1 36288921 . C A 2266.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.38;SOR=1.931 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2295,210,0 chr1 36296795 . C T 1267.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.18;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1296,126,0 chr1 36301374 . G C 1050.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.84;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1079,96,0 chr1 36301799 . C T 3208.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.46;SOR=2.124 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3237,305,0 chr1 36304251 . T C 251.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=3.256;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.98;ReadPosRankSum=1.236;SOR=0.105 GT:AD:DP:GQ:PL 0/1:6,8:14:99:280,0,208 chr1 36307804 . T G 10271.77 PASS AC=2;AF=1.00;AN=2;DP=312;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.92;SOR=0.759 GT:AD:DP:GQ:PL 1/1:0,312:312:99:10300,936,0 chr1 36308218 . C G 6500.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.082;ClippingRankSum=0.000;DP=189;ExcessHet=3.0103;FS=3.199;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=34.58;ReadPosRankSum=-0.793;SOR=0.378 GT:AD:DP:GQ:PL 1/1:1,187:188:99:6529,540,0 chr1 36315459 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 36319669 . C T 6361.77 PASS AC=2;AF=1.00;AN=2;DP=198;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.29;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,197:197:99:6390,591,0 chr1 36322755 . A G 1551.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.73;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1580,138,0 chr1 36326125 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 36341880 . C T 1758.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.865;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=2.833;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.53;ReadPosRankSum=-2.910;SOR=0.478 GT:AD:DP:GQ:PL 0/1:90,77:167:99:1787,0,2531 chr1 36344410 . G A 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.48;ReadPosRankSum=0.129;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,8:12:99:298,0,131 chr1 36394269 . G C 953.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.510;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=1.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.92;ReadPosRankSum=-1.840;SOR=0.908 GT:AD:DP:GQ:PL 0/1:50,30:80:99:982,0,1507 chr1 36406252 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 36418345 . T C 4653.77 PASS AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.66;SOR=1.410 GT:AD:DP:GQ:PL 1/1:0,147:147:99:4682,440,0 chr1 36418872 . A G 1094.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.34;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1123,84,0 chr1 36420763 . C G 1001.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.02;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1030,84,0 chr1 36421930 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 36422101 . C T 3815.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.54;SOR=1.441 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3844,363,0 chr1 36422269 . C T 3093.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.00;SOR=1.855 GT:AD:DP:GQ:PL 1/1:0,91:91:99:3122,273,0 chr1 36422364 . T C 838.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.95;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,24:24:72:867,72,0 chr1 36422465 . T G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.67;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 36422861 . A G 2467.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2496,233,0 chr1 36422919 . A G 1622.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.96;SOR=3.209 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1651,135,0 chr1 36423288 . C T 783.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.223;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=3.120;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.37;ReadPosRankSum=0.337;SOR=0.331 GT:AD:DP:GQ:PL 0/1:23,28:51:99:812,0,704 chr1 36423404 . G A 3185.77 PASS AC=2;AF=1.00;AN=2;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.86;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3214,299,0 chr1 36423596 . T C 331.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.72;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:360,24,0 chr1 36423597 . G A 331.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.17;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:360,24,0 chr1 36423608 . A C 196.90 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.99;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:15:225,15,0 chr1 36424310 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 36424409 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 36424419 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 36428367 . A G 2034.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.83;SOR=1.033 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2063,197,0 chr1 36430379 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 36431576 . A G 726.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.49;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,20:20:60:755,60,0 chr1 36432224 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 36432225 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 36432252 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 36432737 . C T 1528.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.09;SOR=3.109 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1557,129,0 chr1 36432759 . G A 962.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.25;SOR=3.180 GT:AD:DP:GQ:PL 1/1:0,27:27:81:991,81,0 chr1 36438487 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 36439119 . A C 173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=0.312;SOR=0.340 GT:AD:DP:GQ:PL 0/1:10,6:16:99:202,0,370 chr1 36441466 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 36443966 . G A 6349.77 PASS AC=2;AF=1.00;AN=2;DP=201;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.59;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,201:201:99:6378,603,0 chr1 36448000 . T C 1299.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.56;SOR=4.743 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1328,99,0 chr1 36449504 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 36455126 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 36455626 . A G 646.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.54;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:675,51,0 chr1 36455932 . A G 3844.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.43;SOR=1.736 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3873,345,0 chr1 36458042 . G C 6262.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.299;ClippingRankSum=0.000;DP=198;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.63;ReadPosRankSum=-0.632;SOR=0.892 GT:AD:DP:GQ:PL 1/1:2,196:198:99:6291,545,0 chr1 36460331 . C T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 36460808 . G C 4053.77 PASS AC=2;AF=1.00;AN=2;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.94;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,131:131:99:4082,393,0 chr1 36460860 . C T 3174.77 PASS AC=2;AF=1.00;AN=2;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=1.368 GT:AD:DP:GQ:PL 1/1:0,101:101:99:3203,303,0 chr1 36461345 . T G 4029.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.50;SOR=0.725 GT:AD:DP:GQ:PL 1/1:0,124:124:99:4058,372,0 chr1 36462132 . G A 4158.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-1.050;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.51;ReadPosRankSum=-0.586;SOR=0.499 GT:AD:DP:GQ:PL 1/1:1,131:132:99:4187,354,0 chr1 36462245 . C T 3952.77 PASS AC=2;AF=1.00;AN=2;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.22;SOR=1.570 GT:AD:DP:GQ:PL 1/1:0,119:119:99:3981,357,0 chr1 36463532 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 36463571 . G C 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.80;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 36464387 . T C 1941.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.30;SOR=4.091 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1970,150,0 chr1 36464495 . C A 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 36467495 . T C 3162.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.95;SOR=1.251 GT:AD:DP:GQ:PL 1/1:0,96:96:99:3191,288,0 chr1 36469375 . C T 4223.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.380;ClippingRankSum=0.000;DP=290;ExcessHet=3.0103;FS=0.988;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.62;ReadPosRankSum=0.370;SOR=0.624 GT:AD:DP:GQ:PL 0/1:138,151:289:99:4252,0,3829 chr1 36486834 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 36575036 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 36575134 . A T 237.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:24:266,24,0 chr1 36618921 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 36647061 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 36684720 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 36698277 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 36731976 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 36733158 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 36733161 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 36815511 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 36854009 . A G 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.75;ReadPosRankSum=0.480;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:98:224,0,98 chr1 36868259 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 36869484 . C A 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.63;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr1 36869508 . G A 474.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.26;ReadPosRankSum=-0.916;SOR=0.846 GT:AD:DP:GQ:PL 0/1:12,14:26:99:503,0,423 chr1 36869857 . A G 7698.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.483;ClippingRankSum=0.000;DP=234;ExcessHet=3.0103;FS=2.911;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=33.04;ReadPosRankSum=-1.584;SOR=1.860 GT:AD:DP:GQ:PL 1/1:2,231:233:99:7727,649,0 chr1 36869884 . A G 7257.77 PASS AC=2;AF=1.00;AN=2;DP=168;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.91;SOR=2.751 GT:AD:DP:GQ:PL 1/1:0,167:167:99:7286,506,0 chr1 36869893 . G T 6803.77 PASS AC=2;AF=1.00;AN=2;DP=153;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.18;SOR=3.510 GT:AD:DP:GQ:PL 1/1:0,152:152:99:6832,464,0 chr1 36869950 . G A 2424.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.19;SOR=5.353 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2453,181,0 chr1 36914358 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 37102824 . A G 146.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:174,12,0 chr1 37102934 . T A 54.41 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.59;QD=27.20;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:8:82,8,0 chr1 37104628 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 37107226 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 37161380 . T C 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.042;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=10.212;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.99;ReadPosRankSum=-1.729;SOR=0.018 GT:AD:DP:GQ:PL 0/1:19,9:28:99:224,0,709 chr1 37234033 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 37240529 . A G 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr1 37240611 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 37242429 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 37242431 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 37255673 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 37266443 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 37266444 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 37266445 . C T 52.78 PASS AC=1;AF=0.500;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;QD=26.39;SOR=0.693 GT:AD:DP:GQ:PL 0/1:0,2:2:24:81,0,24 chr1 37266480 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.18;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 37266492 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.62;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 37266604 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 37282145 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 37287926 . C A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 37306991 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 37310959 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 37311074 . G C 221.84 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.92;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:18:250,18,0 chr1 37311089 . A G 221.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:250,18,0 chr1 37311125 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 37342993 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 37363122 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 37391587 . T A 65.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:93,9,0 chr1 37426553 . G A 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 37455649 . T C 59.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:87,9,0 chr1 37459607 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 37466544 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 37466597 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 37473572 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 37474574 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 37474756 . A G 235.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.47;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:264,24,0 chr1 37474837 . C A 117.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:146,15,0 chr1 37482611 . C G 3287.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.411;ClippingRankSum=0.000;DP=247;ExcessHet=3.0103;FS=2.798;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.31;ReadPosRankSum=-0.302;SOR=0.732 GT:AD:DP:GQ:PL 0/1:129,118:247:99:3316,0,3474 chr1 37483311 . C T 1054.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.828;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=2.830;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.99;ReadPosRankSum=0.125;SOR=0.507 GT:AD:DP:GQ:PL 0/1:47,41:88:99:1083,0,1358 chr1 37493849 . T C 2588.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.230;ClippingRankSum=0.000;DP=187;ExcessHet=3.0103;FS=3.623;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.84;ReadPosRankSum=-1.330;SOR=1.001 GT:AD:DP:GQ:PL 0/1:94,93:187:99:2617,0,2683 chr1 37493869 . C G 2226.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.348;ClippingRankSum=0.000;DP=174;ExcessHet=3.0103;FS=2.070;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.80;ReadPosRankSum=1.712;SOR=0.922 GT:AD:DP:GQ:PL 0/1:92,82:174:99:2255,0,2546 chr1 37493898 . G C 1974.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.041;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=0.751;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.74;ReadPosRankSum=1.076;SOR=0.859 GT:AD:DP:GQ:PL 0/1:65,69:134:99:2003,0,1848 chr1 37502173 . C A 328.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.100;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.44;ReadPosRankSum=-1.212;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,10:20:99:357,0,345 chr1 37509678 . C T 2500.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=1.463 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2529,231,0 chr1 37509711 . T C 689.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.880;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=1.085;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.10;ReadPosRankSum=0.061;SOR=1.022 GT:AD:DP:GQ:PL 0/1:30,27:57:99:718,0,873 chr1 37513296 . G A 748.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.290;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.966;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.98;ReadPosRankSum=0.668;SOR=0.558 GT:AD:DP:GQ:PL 0/1:46,29:75:99:777,0,1335 chr1 37514845 . A C 663.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.208;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=2.409;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.44;ReadPosRankSum=0.403;SOR=1.609 GT:AD:DP:GQ:PL 0/1:16,20:36:99:692,0,489 chr1 37540758 . A G 687.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.184;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=1.162;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.04;ReadPosRankSum=-0.304;SOR=0.976 GT:AD:DP:GQ:PL 0/1:21,28:49:99:716,0,492 chr1 37545050 . G A 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr1 37557715 . C T 2800.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.186;ClippingRankSum=0.000;DP=272;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.30;ReadPosRankSum=1.728;SOR=0.682 GT:AD:DP:GQ:PL 0/1:157,115:272:99:2829,0,4120 chr1 37567488 . G A 860.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.242;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=1.632;SOR=0.769 GT:AD:DP:GQ:PL 0/1:33,29:62:99:889,0,1022 chr1 37576100 . T G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 37581319 . G T 1502.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.875;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=6.155;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-1.301;SOR=1.279 GT:AD:DP:GQ:PL 0/1:63,58:121:99:1531,0,1791 chr1 37583951 . C G 757.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.139;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=4.178;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.03;ReadPosRankSum=-1.939;SOR=1.427 GT:AD:DP:GQ:PL 0/1:26,28:54:99:786,0,707 chr1 37593392 . A G 142.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=3.802;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.90;ReadPosRankSum=-1.519;SOR=0.093 GT:AD:DP:GQ:PL 0/1:7,5:12:99:171,0,256 chr1 37595971 . G T 779.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.411;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.02;ReadPosRankSum=-0.950;SOR=1.121 GT:AD:DP:GQ:PL 0/1:17,24:41:99:808,0,553 chr1 37612958 . A T 1082.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.088;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.69;ReadPosRankSum=-1.227;SOR=0.682 GT:AD:DP:GQ:PL 0/1:28,41:69:99:1111,0,826 chr1 37616450 . G A 2507.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.102;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=0.806;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.73;ReadPosRankSum=-0.905;SOR=0.796 GT:AD:DP:GQ:PL 0/1:56,65:121:99:2536,0,3772 chr1 37616451 . C T 2507.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.207;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.56;ReadPosRankSum=-0.700;SOR=0.772 GT:AD:DP:GQ:PL 0/1:57,65:122:99:2536,0,3772 chr1 37630132 . C T 254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=0.009;SOR=0.593 GT:AD:DP:GQ:PL 0/1:9,8:17:99:283,0,325 chr1 37630749 . G C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 37633182 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 37633415 . C T 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr1 37656262 . T C 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr1 37661482 . A G 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=-0.712;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:28:120,0,28 chr1 37666431 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 37669306 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 37683093 . A G 3103.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.74;SOR=0.982 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3132,276,0 chr1 37683521 . C T 1096.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.330;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.865;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.75;ReadPosRankSum=-0.899;SOR=0.567 GT:AD:DP:GQ:PL 0/1:48,38:86:99:1125,0,1358 chr1 37684020 . C G 1635.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.589;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.20;ReadPosRankSum=-2.326;SOR=0.690 GT:AD:DP:GQ:PL 0/1:41,60:101:99:1664,0,1156 chr1 37684175 . A G 508.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.361;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.13;ReadPosRankSum=-1.653;SOR=0.586 GT:AD:DP:GQ:PL 0/1:17,19:36:99:537,0,534 chr1 37686033 . T C 60.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.06;ReadPosRankSum=-0.618;SOR=0.148 GT:AD:DP:GQ:PL 0/1:9,3:12:89:89,0,340 chr1 37689593 . G C 1151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.908;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=4.812;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.28;ReadPosRankSum=0.441;SOR=1.162 GT:AD:DP:GQ:PL 0/1:69,43:112:99:1180,0,1815 chr1 37690027 . T G 210.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.539;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=2.009;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.53;ReadPosRankSum=-0.468;SOR=1.445 GT:AD:DP:GQ:PL 0/1:19,9:28:99:239,0,649 chr1 37690051 . C A 389.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.980;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.36;ReadPosRankSum=0.570;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,11:16:99:418,0,177 chr1 37690169 . A T 723.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.08;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,18:18:54:752,54,0 chr1 37690518 . C G 483.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.180;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.61;ReadPosRankSum=0.349;SOR=0.330 GT:AD:DP:GQ:PL 0/1:11,15:26:99:512,0,381 chr1 37696022 . A G 3449.77 PASS AC=2;AF=1.00;AN=2;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.26;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3478,342,0 chr1 37699052 . C G 2892.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.03;SOR=1.528 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2921,255,0 chr1 37700350 . T C 1161.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.52;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1190,93,0 chr1 37700655 . A T 2451.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.90;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2480,246,0 chr1 37705698 . G A 385.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.23;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:414,30,0 chr1 37708513 . G T 4071.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.883;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.57;ReadPosRankSum=1.941;SOR=0.850 GT:AD:DP:GQ:PL 1/1:1,124:125:99:4100,365,0 chr1 37708694 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 37708993 . G A 95.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=-0.319;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,6:8:25:124,0,25 chr1 37716492 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 37718644 . T C 1118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.655;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=1.656;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.19;ReadPosRankSum=1.363;SOR=0.896 GT:AD:DP:GQ:PL 0/1:61,39:100:99:1147,0,1778 chr1 37719209 . A C 178.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.75;ReadPosRankSum=0.507;SOR=0.569 GT:AD:DP:GQ:PL 0/1:7,6:13:99:207,0,253 chr1 37719737 . C G 805.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.624;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.52;ReadPosRankSum=-1.168;SOR=0.914 GT:AD:DP:GQ:PL 0/1:21,25:46:99:834,0,700 chr1 37719975 . G A 4604.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.051;ClippingRankSum=0.000;DP=309;ExcessHet=3.0103;FS=1.902;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.90;ReadPosRankSum=0.279;SOR=0.827 GT:AD:DP:GQ:PL 0/1:141,168:309:99:4633,0,3747 chr1 37720051 . C T 2733.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.215;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=3.812;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.19;ReadPosRankSum=0.307;SOR=1.012 GT:AD:DP:GQ:PL 0/1:86,94:180:99:2762,0,2366 chr1 37720534 . C G 2993.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.090;ClippingRankSum=0.000;DP=220;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.67;ReadPosRankSum=-0.242;SOR=0.720 GT:AD:DP:GQ:PL 0/1:112,107:219:99:3022,0,2930 chr1 37720638 . G A 2161.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.162;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.22;ReadPosRankSum=-0.790;SOR=0.743 GT:AD:DP:GQ:PL 0/1:70,72:142:99:2190,0,2223 chr1 37721172 . C G 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=0.703;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr1 37721501 . G A 180.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.020;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.91;ReadPosRankSum=-1.389;SOR=1.402 GT:AD:DP:GQ:PL 0/1:8,6:14:99:209,0,258 chr1 37721715 . C T 1934.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.816;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=1.401;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.16;ReadPosRankSum=-1.193;SOR=0.868 GT:AD:DP:GQ:PL 0/1:74,73:147:99:1963,0,2186 chr1 37721775 . A G 3450.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.877;ClippingRankSum=0.000;DP=182;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.96;ReadPosRankSum=-0.693;SOR=0.655 GT:AD:DP:GQ:PL 0/1:93,89:182:99:3479,0,3563 chr1 37721781 . G A 3415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.660;ClippingRankSum=0.000;DP=183;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.67;ReadPosRankSum=-0.816;SOR=0.717 GT:AD:DP:GQ:PL 0/1:93,90:183:99:3444,0,3624 chr1 37722207 . C T 1378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.338;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=2.251;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.21;ReadPosRankSum=-1.496;SOR=0.495 GT:AD:DP:GQ:PL 0/1:81,54:135:99:1407,0,2185 chr1 37722317 . T C 1101.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.720;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=1.737;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.24;ReadPosRankSum=0.680;SOR=0.503 GT:AD:DP:GQ:PL 0/1:54,44:98:99:1130,0,1658 chr1 37722357 . A G 715.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.469;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.68;ReadPosRankSum=1.281;SOR=0.625 GT:AD:DP:GQ:PL 0/1:40,27:67:99:744,0,1153 chr1 37722523 . A G 424.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.871;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=4.558;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.31;ReadPosRankSum=1.578;SOR=0.154 GT:AD:DP:GQ:PL 0/1:7,15:22:99:453,0,226 chr1 37722581 . T G 704.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.826;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.55;ReadPosRankSum=1.342;SOR=0.922 GT:AD:DP:GQ:PL 0/1:15,23:38:99:733,0,395 chr1 37722902 . G A 2488.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.561;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=14.605;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.95;ReadPosRankSum=2.267;SOR=0.521 GT:AD:DP:GQ:PL 0/1:67,89:156:99:2517,0,1848 chr1 37722932 . C T 1627.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.318;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.37;ReadPosRankSum=-0.199;SOR=0.689 GT:AD:DP:GQ:PL 0/1:96,61:157:99:1656,0,2693 chr1 37723025 . T C 1842.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.767;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=3.555;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.29;ReadPosRankSum=-0.511;SOR=0.996 GT:AD:DP:GQ:PL 0/1:109,70:179:99:1871,0,3101 chr1 37723068 . C T 1921.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.852;ClippingRankSum=0.000;DP=204;ExcessHet=3.0103;FS=3.243;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.47;ReadPosRankSum=1.131;SOR=0.925 GT:AD:DP:GQ:PL 0/1:124,79:203:99:1950,0,3298 chr1 37723096 . C T 3235.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.496;ClippingRankSum=0.000;DP=217;ExcessHet=3.0103;FS=3.922;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.91;ReadPosRankSum=0.095;SOR=0.960 GT:AD:DP:GQ:PL 0/1:128,89:217:99:3264,0,5218 chr1 37723115 . A G 3458.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.859;ClippingRankSum=0.000;DP=222;ExcessHet=3.0103;FS=1.659;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.58;ReadPosRankSum=-0.681;SOR=0.821 GT:AD:DP:GQ:PL 0/1:127,95:222:99:3487,0,5355 chr1 37723208 . C T 2069.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.190;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=1.098;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.05;ReadPosRankSum=-0.743;SOR=0.597 GT:AD:DP:GQ:PL 0/1:122,84:206:99:2098,0,3041 chr1 37723262 . T C 1840.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.533;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=1.333;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.36;ReadPosRankSum=1.645;SOR=0.846 GT:AD:DP:GQ:PL 0/1:95,67:162:99:1869,0,2612 chr1 37726665 . A T 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,115 chr1 37726865 . T C 548.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.648;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=3.485;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.92;ReadPosRankSum=-0.155;SOR=2.059 GT:AD:DP:GQ:PL 0/1:13,16:29:99:577,0,422 chr1 37731169 . T C 615.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.448;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=2.990;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.39;ReadPosRankSum=-0.410;SOR=0.313 GT:AD:DP:GQ:PL 0/1:14,26:40:99:644,0,397 chr1 37734392 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 37742502 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 37753855 . C G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 37754089 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 37761292 . C T 1004.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.960;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=5.181;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=-0.059;SOR=0.283 GT:AD:DP:GQ:PL 0/1:36,42:78:99:1033,0,1036 chr1 37762544 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 37763125 . A T 137.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.48;ReadPosRankSum=-1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:166,0,256 chr1 37776957 . T C 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.645;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.95;ReadPosRankSum=-0.253;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:98,0,34 chr1 37826488 . G A 804.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.241;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.90;ReadPosRankSum=-0.162;SOR=0.892 GT:AD:DP:GQ:PL 0/1:25,29:54:99:833,0,771 chr1 37828081 . G A 323.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.325;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.99;ReadPosRankSum=-1.026;SOR=0.269 GT:AD:DP:GQ:PL 0/1:8,10:18:99:352,0,248 chr1 37828320 . C T 1552.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.45;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1581,126,0 chr1 37828334 . C T 388.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.093;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.96;ReadPosRankSum=0.102;SOR=0.693 GT:AD:DP:GQ:PL 0/1:15,15:30:99:417,0,466 chr1 37828438 . A G 175.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.50;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:204,15,0 chr1 37835578 . A G 701.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.447;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=4.494;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.32;ReadPosRankSum=-0.032;SOR=1.383 GT:AD:DP:GQ:PL 0/1:44,24:68:99:730,0,1282 chr1 37835804 . G A 477.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.547;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=1.594;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.91;ReadPosRankSum=-1.976;SOR=0.404 GT:AD:DP:GQ:PL 0/1:19,18:37:99:506,0,581 chr1 37840684 . T C 175.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.55;ReadPosRankSum=-0.065;SOR=0.473 GT:AD:DP:GQ:PL 0/1:8,6:14:99:204,0,287 chr1 37862310 . G T 1030.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.671;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.74;ReadPosRankSum=-0.735;SOR=0.656 GT:AD:DP:GQ:PL 0/1:33,42:75:99:1059,0,897 chr1 37864327 . C G 1868.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.301;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=2.374;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.70;ReadPosRankSum=-0.954;SOR=0.497 GT:AD:DP:GQ:PL 0/1:49,70:119:99:1897,0,1249 chr1 37873123 . A G 1586.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=1.753;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.56;ReadPosRankSum=0.793;SOR=0.926 GT:AD:DP:GQ:PL 0/1:52,57:109:99:1615,0,1506 chr1 37875846 . G A 1259.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1288,99,0 chr1 37880224 . A C 586.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.113;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=3.183;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=0.403;SOR=0.283 GT:AD:DP:GQ:PL 0/1:23,21:44:99:615,0,693 chr1 37882834 . G A 1370.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.468;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=3.351;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.82;ReadPosRankSum=0.669;SOR=0.884 GT:AD:DP:GQ:PL 0/1:62,54:116:99:1399,0,1624 chr1 37887177 . G C 430.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.096;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.475;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.46;ReadPosRankSum=-0.217;SOR=0.361 GT:AD:DP:GQ:PL 0/1:17,15:32:99:459,0,518 chr1 37889848 . A G 760.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.066;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.19;ReadPosRankSum=0.158;SOR=1.609 GT:AD:DP:GQ:PL 0/1:24,23:47:99:789,0,807 chr1 37896852 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 37896890 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 37904847 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 37908317 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 37929739 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 37931669 . G A 1395.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.982;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.46;ReadPosRankSum=-0.906;SOR=0.713 GT:AD:DP:GQ:PL 0/1:58,54:112:99:1424,0,1701 chr1 37931697 . C T 1674.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.514;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=0.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.96;ReadPosRankSum=1.798;SOR=0.575 GT:AD:DP:GQ:PL 0/1:61,59:120:99:1703,0,1832 chr1 37934886 . C T 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr1 37943440 . T A 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.68;ReadPosRankSum=-0.566;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:145,0,104 chr1 37945603 . A G 1424.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.819;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.930;SOR=0.721 GT:AD:DP:GQ:PL 0/1:34,47:81:99:1453,0,1006 chr1 37958181 . G C 398.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.819;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=10.375;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.46;ReadPosRankSum=-1.613;SOR=0.032 GT:AD:DP:GQ:PL 0/1:17,15:32:99:427,0,614 chr1 37960052 . T C 1764.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.814;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=5.989;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.83;ReadPosRankSum=1.150;SOR=1.287 GT:AD:DP:GQ:PL 0/1:53,66:119:99:1793,0,1454 chr1 37960223 . T C 2118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.877;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.24;ReadPosRankSum=0.290;SOR=0.684 GT:AD:DP:GQ:PL 0/1:58,81:139:99:2147,0,1489 chr1 37960440 . T C 136.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.01;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:164,12,0 chr1 37976875 . G A 839.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.569;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=14.460;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.00;ReadPosRankSum=0.496;SOR=2.028 GT:AD:DP:GQ:PL 0/1:33,27:60:99:868,0,910 chr1 37978661 . A G 89.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.98;ReadPosRankSum=-1.547;SOR=0.160 GT:AD:DP:GQ:PL 0/1:11,4:15:99:118,0,410 chr1 37979077 . T C 611.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.574;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.345;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.92;ReadPosRankSum=0.324;SOR=1.011 GT:AD:DP:GQ:PL 0/1:20,21:41:99:640,0,576 chr1 37981943 . G T 106.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.335;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.71;ReadPosRankSum=-0.938;SOR=0.120 GT:AD:DP:GQ:PL 0/1:6,5:11:99:135,0,213 chr1 37982913 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 37984238 . T C 1376.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.613;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=1.617;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.52;ReadPosRankSum=0.620;SOR=0.525 GT:AD:DP:GQ:PL 0/1:57,53:110:99:1405,0,1446 chr1 37984695 . A G 400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.194;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=2.124;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.64;ReadPosRankSum=0.038;SOR=0.583 GT:AD:DP:GQ:PL 0/1:48,23:71:99:429,0,1152 chr1 37984955 . A G 103.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:131,12,0 chr1 37987904 . A C 820.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.304;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=0.822;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.66;ReadPosRankSum=0.077;SOR=0.796 GT:AD:DP:GQ:PL 0/1:52,33:85:99:849,0,1444 chr1 37989717 . C T 1758.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.382;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=5.384;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.03;ReadPosRankSum=-1.472;SOR=0.320 GT:AD:DP:GQ:PL 0/1:54,63:117:99:1787,0,1698 chr1 37990219 . G C 448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.40;ReadPosRankSum=1.434;SOR=1.085 GT:AD:DP:GQ:PL 0/1:9,13:22:99:477,0,310 chr1 37997226 . T A 5886.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.757;ClippingRankSum=0.000;DP=189;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.31;ReadPosRankSum=-1.432;SOR=0.240 GT:AD:DP:GQ:PL 1/1:1,187:188:99:5915,550,0 chr1 37997233 . C G 8313.77 PASS AC=2;AF=1.00;AN=2;DP=191;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.07;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,191:191:99:8342,577,0 chr1 37997832 . C T 5344.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.492;ClippingRankSum=0.000;DP=403;ExcessHet=3.0103;FS=4.054;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=-1.766;SOR=0.569 GT:AD:DP:GQ:PL 0/1:210,193:403:99:5373,0,6073 chr1 37998967 . C G 9343.77 PASS AC=2;AF=1.00;AN=2;DP=282;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.25;SOR=1.162 GT:AD:DP:GQ:PL 1/1:0,281:281:99:9372,843,0 chr1 37999643 . G A 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.967;SOR=0.368 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 38003828 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 38010847 . C T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 38088620 . A G 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=1.282;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr1 38088658 . A C 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.253;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr1 38089079 . T C 357.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.355;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.25;ReadPosRankSum=0.179;SOR=0.132 GT:AD:DP:GQ:PL 0/1:15,12:27:99:386,0,516 chr1 38132150 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 38135945 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 38151524 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 38153450 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.73;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 38153469 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.22;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 38158765 . A C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 38158858 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 38191877 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 38191879 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 38266259 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 38275342 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 38294930 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 38495896 . G A 59.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:87,9,0 chr1 38641927 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 38709824 . C T 544.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.111;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=-2.082;SOR=0.639 GT:AD:DP:GQ:PL 0/1:25,22:47:99:573,0,665 chr1 38710557 . G A 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.471;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.90;ReadPosRankSum=0.048;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,4:12:63:63,0,230 chr1 38846326 . G A 107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=-0.921;SOR=0.330 GT:AD:DP:GQ:PL 0/1:3,5:8:99:136,0,102 chr1 38856651 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 38859220 . G T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 38859391 . T C 236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.153;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.76;ReadPosRankSum=-0.333;SOR=1.022 GT:AD:DP:GQ:PL 0/1:10,12:22:99:265,0,249 chr1 38864908 . T C 334.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.50;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:363,27,0 chr1 38866650 . C T 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-1.309;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr1 38873335 . C G 1673.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.671;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=1.450;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.18;ReadPosRankSum=-1.636;SOR=0.868 GT:AD:DP:GQ:PL 0/1:59,68:127:99:1702,0,1664 chr1 38873777 . C T 1478.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.865;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=2.046;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.07;ReadPosRankSum=-0.833;SOR=0.906 GT:AD:DP:GQ:PL 0/1:100,63:163:99:1507,0,2820 chr1 38874010 . T C 409.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.828;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.71;ReadPosRankSum=-0.450;SOR=0.315 GT:AD:DP:GQ:PL 0/1:22,13:35:99:438,0,802 chr1 38874610 . C T 2385.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.055;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=3.162;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.80;ReadPosRankSum=1.038;SOR=1.022 GT:AD:DP:GQ:PL 0/1:68,83:151:99:2414,0,2086 chr1 38885987 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 38886411 . T G 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=0.571;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:256,0,173 chr1 38886599 . G T 2617.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.325;ClippingRankSum=0.000;DP=181;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=0.665;SOR=0.708 GT:AD:DP:GQ:PL 0/1:79,102:181:99:2646,0,1883 chr1 38886820 . G A 614.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.087;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.37;ReadPosRankSum=1.080;SOR=0.693 GT:AD:DP:GQ:PL 0/1:20,20:40:99:643,0,669 chr1 38895943 . G A 1520.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.450;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.10;ReadPosRankSum=-0.600;SOR=0.727 GT:AD:DP:GQ:PL 0/1:28,56:84:99:1549,0,679 chr1 38919188 . T A 2446.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.012;ClippingRankSum=0.000;DP=210;ExcessHet=3.0103;FS=0.516;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.71;ReadPosRankSum=0.524;SOR=0.623 GT:AD:DP:GQ:PL 0/1:108,101:209:99:2475,0,2708 chr1 38919414 . A C 676.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.227;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=1.138;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.09;ReadPosRankSum=-1.949;SOR=0.498 GT:AD:DP:GQ:PL 0/1:35,26:61:99:705,0,1040 chr1 38928986 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 38946430 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 38991334 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 39000954 . A G 315.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.911;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=3.996;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.70;ReadPosRankSum=1.301;SOR=1.678 GT:AD:DP:GQ:PL 0/1:29,12:41:99:344,0,939 chr1 39001114 . C G 756.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.824;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=0.774;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.35;ReadPosRankSum=0.111;SOR=0.825 GT:AD:DP:GQ:PL 0/1:67,36:103:99:785,0,1983 chr1 39003133 . C A 268.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.949;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.92;ReadPosRankSum=0.009;SOR=0.346 GT:AD:DP:GQ:PL 0/1:6,9:15:99:297,0,205 chr1 39017258 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 39028533 . G C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.524;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 39084538 . C T 1849.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.50;SOR=6.273 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1878,138,0 chr1 39102577 . A G 301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.55;ReadPosRankSum=-0.771;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,9:14:99:330,0,167 chr1 39103093 . T C 132.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.583;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=2.933;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.30;ReadPosRankSum=1.029;SOR=2.093 GT:AD:DP:GQ:PL 0/1:11,5:16:99:161,0,343 chr1 39156121 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 39202655 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 39230975 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.93;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 39251894 . T C 3113.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.53;SOR=0.905 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3142,306,0 chr1 39268926 . G C 3306.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.677;ClippingRankSum=0.000;DP=253;ExcessHet=3.0103;FS=0.985;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.07;ReadPosRankSum=-0.148;SOR=0.781 GT:AD:DP:GQ:PL 0/1:137,116:253:99:3335,0,3821 chr1 39283249 . G A 2328.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.249;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=0.611;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.74;ReadPosRankSum=0.378;SOR=0.635 GT:AD:DP:GQ:PL 0/1:67,91:158:99:2357,0,1592 chr1 39293283 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,100 chr1 39293321 . C G 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=0.210;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:137,0,221 chr1 39297570 . G A 3069.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.540;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=2.623;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.83;ReadPosRankSum=1.637;SOR=0.917 GT:AD:DP:GQ:PL 0/1:93,114:207:99:3098,0,2358 chr1 39300383 . C T 1250.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.137;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=1.880;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.31;ReadPosRankSum=-1.321;SOR=0.950 GT:AD:DP:GQ:PL 0/1:50,44:94:99:1279,0,1397 chr1 39304626 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 39332761 . C T 530.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.802;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=3.723;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.00;ReadPosRankSum=0.910;SOR=1.230 GT:AD:DP:GQ:PL 0/1:38,21:59:99:559,0,1091 chr1 39334886 . C A 1815.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.038;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=2.790;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.35;ReadPosRankSum=-0.161;SOR=0.491 GT:AD:DP:GQ:PL 0/1:86,74:160:99:1844,0,2320 chr1 39340938 . C T 1176.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.80;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1205,111,0 chr1 39341786 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 39346762 . G A 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=0.000;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr1 39346948 . G T 4922.77 PASS AC=2;AF=1.00;AN=2;DP=148;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=1.917 GT:AD:DP:GQ:PL 1/1:0,148:148:99:4951,444,0 chr1 39347150 . C A 10530.77 PASS AC=2;AF=1.00;AN=2;DP=311;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,310:310:99:10559,930,0 chr1 39350874 . G A 4264.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-4.623;ClippingRankSum=0.000;DP=339;ExcessHet=3.0103;FS=2.321;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.62;ReadPosRankSum=0.332;SOR=0.830 GT:AD:DP:GQ:PL 0/1:160,178:338:99:4293,0,4472 chr1 39358194 . A T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:67:72,0,67 chr1 39359046 . C G 496.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.529;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=13.080;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.56;ReadPosRankSum=-0.123;SOR=0.041 GT:AD:DP:GQ:PL 0/1:12,18:30:99:525,0,376 chr1 39369868 . T C 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr1 39378244 . A G 371.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.409;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.70;ReadPosRankSum=0.000;SOR=0.307 GT:AD:DP:GQ:PL 0/1:9,12:21:99:400,0,301 chr1 39378286 . G A 668.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.504;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=2.087;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.07;ReadPosRankSum=1.020;SOR=0.302 GT:AD:DP:GQ:PL 0/1:16,21:37:99:697,0,523 chr1 39379036 . T C 438.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.41;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:467,36,0 chr1 39413845 . G A 1063.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.585;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=5.040;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.53;ReadPosRankSum=0.283;SOR=1.213 GT:AD:DP:GQ:PL 0/1:59,42:101:99:1092,0,1679 chr1 39424005 . G A 970.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.594;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.48;ReadPosRankSum=-0.770;SOR=0.831 GT:AD:DP:GQ:PL 0/1:38,34:72:99:999,0,1098 chr1 39427421 . C T 1153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.053;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=2.363;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.81;ReadPosRankSum=-0.433;SOR=1.148 GT:AD:DP:GQ:PL 0/1:33,40:73:99:1182,0,877 chr1 39429167 . A G 627.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.77;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:656,48,0 chr1 39429788 . G A 447.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.169;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.45;ReadPosRankSum=-0.657;SOR=0.542 GT:AD:DP:GQ:PL 0/1:32,21:53:99:476,0,802 chr1 39437457 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr1 39442834 . G A 1253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.260;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.72;ReadPosRankSum=-0.349;SOR=0.738 GT:AD:DP:GQ:PL 0/1:65,52:117:99:1282,0,1682 chr1 39443029 . G A 351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.534;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=2.062;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.13;ReadPosRankSum=-0.702;SOR=1.270 GT:AD:DP:GQ:PL 0/1:17,12:29:99:380,0,540 chr1 39443054 . A G 363.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.496;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=3.067;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.53;ReadPosRankSum=0.357;SOR=0.148 GT:AD:DP:GQ:PL 0/1:9,13:22:99:392,0,294 chr1 39444585 . A T 1000.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.597;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=1.992;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.17;ReadPosRankSum=-0.516;SOR=0.420 GT:AD:DP:GQ:PL 0/1:38,38:76:99:1029,0,1072 chr1 39445012 . T C 60.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.887;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.60;ReadPosRankSum=-0.703;SOR=1.270 GT:AD:DP:GQ:PL 0/1:5,3:8:89:89,0,185 chr1 39448691 . G C 1253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.087;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.87;ReadPosRankSum=0.146;SOR=0.735 GT:AD:DP:GQ:PL 0/1:32,47:79:99:1282,0,793 chr1 39453562 . A G 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=1.290;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:256,0,173 chr1 39453674 . T G 1044.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.310;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=6.556;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.31;ReadPosRankSum=0.704;SOR=0.177 GT:AD:DP:GQ:PL 0/1:36,37:73:99:1073,0,1093 chr1 39458103 . C G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 39459254 . T C 2270.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.040;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=1.326;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.37;ReadPosRankSum=1.529;SOR=0.587 GT:AD:DP:GQ:PL 0/1:70,88:158:99:2299,0,1705 chr1 39460246 . C G 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr1 39461835 . G A 2031.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=38.02;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,55:55:99:2060,164,0 chr1 39463568 . T C 579.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.655;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=1.264;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.00;ReadPosRankSum=0.080;SOR=1.044 GT:AD:DP:GQ:PL 0/1:36,22:58:99:608,0,1048 chr1 39463910 . G A 244.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.372;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.64;ReadPosRankSum=0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:14,9:23:99:273,0,447 chr1 39479625 . C T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=1.006;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 39490383 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 39490429 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 39492241 . A G 4050.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.804;ClippingRankSum=0.000;DP=283;ExcessHet=3.0103;FS=0.923;MLEAC=1;MLEAF=0.500;MQ=59.82;MQRankSum=0.035;QD=14.31;ReadPosRankSum=0.325;SOR=0.778 GT:AD:DP:GQ:PL 0/1:138,145:283:99:4079,0,3696 chr1 39492408 . C G 2236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.005;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=0.815;MLEAC=1;MLEAF=0.500;MQ=59.35;MQRankSum=0.730;QD=15.53;ReadPosRankSum=0.764;SOR=0.532 GT:AD:DP:GQ:PL 0/1:72,72:144:99:2265,0,2163 chr1 39494916 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 39509569 . C G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 39509736 . T C 38.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.69;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:67:67,0,72 chr1 39517602 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.05;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 39522412 . G A 859.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.929;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=8.966;MLEAC=1;MLEAF=0.500;MQ=55.86;MQRankSum=-9.805;QD=8.51;ReadPosRankSum=-2.584;SOR=1.791 GT:AD:DP:GQ:PL 0/1:68,33:101:99:888,0,2024 chr1 39523514 . T C 522.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.72;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:551,42,0 chr1 39523655 . C T 849.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.594;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=4.845;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.48;ReadPosRankSum=-0.821;SOR=0.288 GT:AD:DP:GQ:PL 0/1:41,33:74:99:878,0,1200 chr1 39525811 . A G 2879.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.714;ClippingRankSum=0.000;DP=210;ExcessHet=3.0103;FS=1.688;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.71;ReadPosRankSum=0.593;SOR=0.841 GT:AD:DP:GQ:PL 0/1:96,114:210:99:2908,0,2277 chr1 39536854 . A G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 39541605 . C A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 39545973 . A G 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.792;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 39551323 . A G 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=-0.524;SOR=1.447 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr1 39626417 . T C 3721.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.23;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3750,335,0 chr1 39630381 . T C 2222.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.58;SOR=4.731 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2251,168,0 chr1 39632656 . T C 10945.77 PASS AC=2;AF=1.00;AN=2;DP=332;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.97;SOR=0.918 GT:AD:DP:GQ:PL 1/1:0,332:332:99:10974,996,0 chr1 39632905 . T C 253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.15;ReadPosRankSum=-0.842;SOR=1.445 GT:AD:DP:GQ:PL 0/1:4,8:12:99:282,0,131 chr1 39665417 . G T 2485.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.318;ClippingRankSum=0.000;DP=145;ExcessHet=3.0103;FS=3.162;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.14;ReadPosRankSum=-0.747;SOR=1.322 GT:AD:DP:GQ:PL 0/1:70,75:145:99:2514,0,2297 chr1 39671256 . C T 92.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:120,9,0 chr1 39672082 . G A 642.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.526;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.71;ReadPosRankSum=-0.393;SOR=0.854 GT:AD:DP:GQ:PL 0/1:36,24:60:99:671,0,1240 chr1 39674988 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 39682946 . C T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-0.189;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:73:107,0,73 chr1 39683115 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 39683137 . C G 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr1 39683843 . A G 1733.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=5.330 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1762,132,0 chr1 39683879 . G C 1440.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.541;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.66;ReadPosRankSum=-1.198;SOR=0.743 GT:AD:DP:GQ:PL 0/1:45,47:92:99:1469,0,1420 chr1 39683970 . G T 7948.77 PASS AC=2;AF=1.00;AN=2;DP=241;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,241:241:99:7977,723,0 chr1 39684198 . C G 2204.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.65;SOR=5.174 GT:AD:DP:GQ:PL 1/1:0,55:55:99:2233,165,0 chr1 39684203 . C T 733.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.056;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=3.082;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=0.736;SOR=0.113 GT:AD:DP:GQ:PL 0/1:24,27:51:99:762,0,847 chr1 39684299 . G A 136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.998;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=2.632;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=-1.419;SOR=2.303 GT:AD:DP:GQ:PL 0/1:6,6:12:99:165,0,203 chr1 39684484 . G A 1259.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.675;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=1.678;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.40;ReadPosRankSum=0.967;SOR=0.513 GT:AD:DP:GQ:PL 0/1:43,51:94:99:1288,0,1084 chr1 39684698 . C T 577.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.99;SOR=2.712 GT:AD:DP:GQ:PL 1/1:0,17:17:51:606,51,0 chr1 39704982 . C G 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr1 39708875 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 39735335 . A G 342.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.080;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.04;ReadPosRankSum=0.344;SOR=0.387 GT:AD:DP:GQ:PL 0/1:7,11:18:99:371,0,238 chr1 39738752 . A T 301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.688;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=14.150;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.21;ReadPosRankSum=-0.289;SOR=4.799 GT:AD:DP:GQ:PL 0/1:3,10:13:55:330,0,55 chr1 39739151 . C T 35.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:64:64,0,71 chr1 39741497 . T G 1513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.696;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.56;ReadPosRankSum=-1.187;SOR=0.702 GT:AD:DP:GQ:PL 0/1:49,55:104:99:1542,0,1279 chr1 39748853 . T A 1056.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.427;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=1.228;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.28;ReadPosRankSum=1.448;SOR=0.403 GT:AD:DP:GQ:PL 0/1:37,37:74:99:1085,0,1152 chr1 39749272 . A G 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=2.137;SOR=0.473 GT:AD:DP:GQ:PL 0/1:8,6:14:99:208,0,290 chr1 39753393 . C T 2390.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.430;ClippingRankSum=0.000;DP=173;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.90;ReadPosRankSum=-0.268;SOR=0.728 GT:AD:DP:GQ:PL 0/1:81,91:172:99:2419,0,2180 chr1 39753608 . T C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.524;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 39760374 . G A 1060.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.754;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=2.918;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.28;ReadPosRankSum=-0.239;SOR=1.109 GT:AD:DP:GQ:PL 0/1:53,41:94:99:1089,0,1420 chr1 39761385 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 39763647 . G A 868.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.939;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=1.819;MLEAC=1;MLEAF=0.500;MQ=53.23;MQRankSum=-6.875;QD=7.69;ReadPosRankSum=-1.008;SOR=0.990 GT:AD:DP:GQ:PL 0/1:79,34:113:99:897,0,2139 chr1 39763696 . A G 1582.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.501;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=5.030;MLEAC=1;MLEAF=0.500;MQ=51.77;MQRankSum=-10.062;QD=10.77;ReadPosRankSum=-1.762;SOR=1.099 GT:AD:DP:GQ:PL 0/1:87,60:147:99:1611,0,2120 chr1 39764664 . C G 2613.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.114;ClippingRankSum=0.000;DP=484;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.11;MQRankSum=-0.703;QD=5.40;ReadPosRankSum=-0.331;SOR=0.691 GT:AD:DP:GQ:PL 0/1:346,138:484:99:2642,0,8790 chr1 39775171 . C T 428.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.862;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=6.368;MLEAC=1;MLEAF=0.500;MQ=51.49;MQRankSum=2.447;QD=15.88;ReadPosRankSum=0.905;SOR=0.061 GT:AD:DP:GQ:PL 0/1:12,15:27:99:457,0,370 chr1 39787880 . C T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.80;MQRankSum=-0.524;QD=9.55;ReadPosRankSum=0.674;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr1 39814125 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 39820378 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=38.17;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 39820388 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.01;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 39822745 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 39822802 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 39842047 . A G 605.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.20;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:634,48,0 chr1 39850216 . A T 3386.77 PASS AC=2;AF=1.00;AN=2;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.65;SOR=1.265 GT:AD:DP:GQ:PL 1/1:0,107:107:99:3415,321,0 chr1 39853707 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 39853915 . A C 2283.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.45;SOR=1.319 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2312,225,0 chr1 39883459 . G A 6649.77 PASS AC=2;AF=1.00;AN=2;DP=203;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.76;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,203:203:99:6678,610,0 chr1 39883738 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 39897382 . G C 3810.77 PASS AC=2;AF=1.00;AN=2;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.96;SOR=1.743 GT:AD:DP:GQ:PL 1/1:0,109:109:99:3839,327,0 chr1 39901920 . A G 874.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.51;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:98:903,98,0 chr1 39901953 . G T 247.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.056;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.85;ReadPosRankSum=-0.162;SOR=0.495 GT:AD:DP:GQ:PL 0/1:15,13:28:99:276,0,339 chr1 39926655 . T C 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:63,0,33 chr1 39962656 . G T 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=-0.792;SOR=0.223 GT:AD:DP:GQ:PL 0/1:4,4:8:99:109,0,143 chr1 39965929 . C T 3132.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.309;ClippingRankSum=0.000;DP=227;ExcessHet=3.0103;FS=2.356;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.86;ReadPosRankSum=-0.832;SOR=0.543 GT:AD:DP:GQ:PL 0/1:104,122:226:99:3161,0,2882 chr1 39966055 . A G 2924.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.769;ClippingRankSum=0.000;DP=210;ExcessHet=3.0103;FS=8.380;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=-0.390;SOR=1.251 GT:AD:DP:GQ:PL 0/1:106,103:209:99:2953,0,2714 chr1 40024393 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 40060331 . T C 373.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.687;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=1.649;SOR=0.223 GT:AD:DP:GQ:PL 0/1:12,13:25:99:402,0,426 chr1 40061858 . C T 778.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.519;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=3.016;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.27;ReadPosRankSum=-2.525;SOR=0.394 GT:AD:DP:GQ:PL 0/1:51,33:84:99:807,0,1537 chr1 40066356 . C T 457.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.330;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=10.935;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.90;ReadPosRankSum=-1.280;SOR=0.080 GT:AD:DP:GQ:PL 0/1:22,20:42:99:486,0,551 chr1 40067594 . T G 1615.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.22;SOR=1.923 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1644,120,0 chr1 40067615 . T G 1761.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.19;SOR=2.636 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1790,132,0 chr1 40067643 . T G 2972.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.99;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,64:64:99:3001,202,0 chr1 40067648 . T G 3031.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=38.70;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,67:67:99:3060,205,0 chr1 40067654 . T G 3115.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.29;SOR=1.410 GT:AD:DP:GQ:PL 1/1:0,67:67:99:3144,211,0 chr1 40067675 . T G 3512.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.939;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=24.27;ReadPosRankSum=0.827;SOR=0.407 GT:AD:DP:GQ:PL 1/1:1,85:86:99:3541,248,0 chr1 40070281 . A T 1394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.459;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=3.185;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.65;ReadPosRankSum=-0.648;SOR=0.468 GT:AD:DP:GQ:PL 0/1:74,57:131:99:1423,0,2020 chr1 40070298 . T G 1506.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.702;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=1.363;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.00;ReadPosRankSum=0.325;SOR=0.578 GT:AD:DP:GQ:PL 0/1:79,58:137:99:1535,0,2135 chr1 40091250 . T C 3279.77 PASS AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.54;SOR=1.257 GT:AD:DP:GQ:PL 1/1:0,104:104:99:3308,311,0 chr1 40092584 . C G 1082.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.57;SOR=3.841 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1111,87,0 chr1 40093806 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 40094159 . G A 610.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.065;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=1.172;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.00;ReadPosRankSum=1.120;SOR=1.071 GT:AD:DP:GQ:PL 0/1:21,26:47:99:639,0,483 chr1 40097321 . T C 462.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.575;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=2.087;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.51;ReadPosRankSum=1.069;SOR=1.345 GT:AD:DP:GQ:PL 0/1:21,16:37:99:491,0,660 chr1 40133103 . T C 232.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.591;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.91;ReadPosRankSum=2.662;SOR=1.270 GT:AD:DP:GQ:PL 0/1:5,8:13:99:261,0,152 chr1 40169898 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 40189291 . C A 97.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.109;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.26;ReadPosRankSum=0.062;SOR=1.022 GT:AD:DP:GQ:PL 0/1:24,6:30:99:126,0,674 chr1 40235706 . T G 135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.892;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.34;ReadPosRankSum=0.637;SOR=2.636 GT:AD:DP:GQ:PL 0/1:6,5:11:99:164,0,149 chr1 40240054 . A T 1320.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.976;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.84;ReadPosRankSum=-0.842;SOR=0.730 GT:AD:DP:GQ:PL 0/1:44,45:89:99:1349,0,1240 chr1 40245884 . A G 279.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:27:308,27,0 chr1 40267986 . A G 556.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.995;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=6.749;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=-0.173;SOR=2.303 GT:AD:DP:GQ:PL 0/1:26,18:44:99:585,0,783 chr1 40270607 . G A 31.29 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr1 40271844 . T G 776.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.94;SOR=2.737 GT:AD:DP:GQ:PL 1/1:0,22:22:66:805,66,0 chr1 40271917 . T C 689.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.641;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.08;ReadPosRankSum=-0.084;SOR=0.686 GT:AD:DP:GQ:PL 0/1:49,27:76:99:718,0,1407 chr1 40292321 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 40303916 . C T 1395.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.034;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=1.943;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.37;ReadPosRankSum=-0.034;SOR=0.963 GT:AD:DP:GQ:PL 0/1:28,48:76:99:1424,0,671 chr1 40308522 . A C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 40364954 . A G 374.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.163;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=2.704;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.72;ReadPosRankSum=-0.207;SOR=0.799 GT:AD:DP:GQ:PL 0/1:27,16:43:99:403,0,624 chr1 40365164 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.29;ReadPosRankSum=0.000;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:72:72,0,467 chr1 40365167 . C A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.75;ReadPosRankSum=-0.524;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:72:72,0,467 chr1 40365168 . C G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.75;ReadPosRankSum=-0.524;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:72:72,0,467 chr1 40374602 . T C 89.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.101;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.72;ReadPosRankSum=1.635;SOR=0.730 GT:AD:DP:GQ:PL 0/1:14,5:19:99:118,0,504 chr1 40374622 . T A 245.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.270;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=1.740;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.70;ReadPosRankSum=0.811;SOR=0.991 GT:AD:DP:GQ:PL 0/1:11,10:21:99:274,0,267 chr1 40374624 . T A 826.73 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=0.646;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=3.757;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=33.07;ReadPosRankSum=-0.914;SOR=0.916 GT:AD:DP:GQ:PL 1/1:1,24:25:39:864,39,0 chr1 40374681 . A G 406.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.117;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=3.940;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.14;ReadPosRankSum=-0.466;SOR=0.503 GT:AD:DP:GQ:PL 0/1:38,19:57:99:435,0,1019 chr1 40393563 . T C 127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.313;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.08;ReadPosRankSum=-0.523;SOR=0.053 GT:AD:DP:GQ:PL 0/1:14,7:21:99:156,0,498 chr1 40406523 . G A 513.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.41;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:542,39,0 chr1 40412836 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 40413964 . T C 476.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.05;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:505,42,0 chr1 40414136 . G C,T 1592.77 PASS AC=1,1;AF=0.500,0.500;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=60.00;QD=28.44;SOR=0.693 GT:AD:DP:GQ:PL 1/2:0,35,21:56:99:1621,644,539,976,0,911 chr1 40415369 . C G 5372.77 PASS AC=2;AF=1.00;AN=2;DP=176;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.53;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,176:176:99:5401,528,0 chr1 40415575 . A G 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.18;ReadPosRankSum=-0.949;SOR=0.346 GT:AD:DP:GQ:PL 0/1:6,9:15:99:331,0,193 chr1 40417081 . A G 2786.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.182;ClippingRankSum=0.000;DP=243;ExcessHet=3.0103;FS=0.474;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.47;ReadPosRankSum=0.051;SOR=0.756 GT:AD:DP:GQ:PL 0/1:131,112:243:99:2815,0,3239 chr1 40456862 . T G 1837.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.363;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=0.687;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.71;ReadPosRankSum=-0.140;SOR=0.782 GT:AD:DP:GQ:PL 0/1:65,69:134:99:1866,0,1692 chr1 40462210 . G A 511.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.761;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=3.462;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.12;ReadPosRankSum=-0.590;SOR=0.269 GT:AD:DP:GQ:PL 0/1:20,19:39:99:540,0,616 chr1 40462395 . A T 814.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.643;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.18;ReadPosRankSum=0.486;SOR=0.693 GT:AD:DP:GQ:PL 0/1:44,36:80:99:843,0,1138 chr1 40471341 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 40479320 . A C 944.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.922;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=2.243;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.83;ReadPosRankSum=-0.391;SOR=1.402 GT:AD:DP:GQ:PL 0/1:25,28:53:99:973,0,767 chr1 40489484 . A T 906.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.907;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.910;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.33;ReadPosRankSum=-1.050;SOR=0.885 GT:AD:DP:GQ:PL 0/1:51,29:80:99:935,0,1457 chr1 40495317 . T A 1300.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.107;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=2.516;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.39;ReadPosRankSum=-0.436;SOR=0.626 GT:AD:DP:GQ:PL 0/1:55,50:105:99:1329,0,1505 chr1 40515059 . G T 2115.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.103;ClippingRankSum=0.000;DP=183;ExcessHet=3.0103;FS=1.154;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.56;ReadPosRankSum=-1.493;SOR=0.776 GT:AD:DP:GQ:PL 0/1:101,82:183:99:2144,0,2767 chr1 40515511 . A G 3742.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.576;ClippingRankSum=0.000;DP=267;ExcessHet=3.0103;FS=0.928;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.07;ReadPosRankSum=0.630;SOR=0.664 GT:AD:DP:GQ:PL 0/1:129,137:266:99:3771,0,3585 chr1 40533230 . A G 670.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.416;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=2.860;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.24;ReadPosRankSum=0.283;SOR=1.264 GT:AD:DP:GQ:PL 0/1:23,21:44:99:699,0,692 chr1 40547588 . C T 95.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:123,9,0 chr1 40626346 . G A 162.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.191;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.80;ReadPosRankSum=-0.341;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,7:11:99:191,0,100 chr1 40626906 . T C 376.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.93;ReadPosRankSum=-0.773;SOR=1.179 GT:AD:DP:GQ:PL 0/1:7,11:18:99:405,0,238 chr1 40628648 . C G 399.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.189;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.66;ReadPosRankSum=-0.288;SOR=1.302 GT:AD:DP:GQ:PL 0/1:12,12:24:99:428,0,361 chr1 40629292 . G C 2137.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.648;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=3.932;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.85;ReadPosRankSum=1.173;SOR=0.844 GT:AD:DP:GQ:PL 0/1:70,74:144:99:2166,0,1839 chr1 40629499 . A G 851.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.919;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.51;ReadPosRankSum=1.451;SOR=0.613 GT:AD:DP:GQ:PL 0/1:38,36:74:99:880,0,1106 chr1 40632806 . A G 377.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.70;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:406,30,0 chr1 40635900 . A G 2877.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.67;SOR=1.816 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2906,249,0 chr1 40636409 . C T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 40641688 . T C 6174.77 PASS AC=2;AF=1.00;AN=2;DP=194;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.83;SOR=1.104 GT:AD:DP:GQ:PL 1/1:0,194:194:99:6203,581,0 chr1 40641896 . T G 1083.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.916;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=6.583;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=1.018;SOR=1.828 GT:AD:DP:GQ:PL 0/1:36,35:71:99:1112,0,1011 chr1 40641940 . C G 536.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.692;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.51;ReadPosRankSum=0.935;SOR=1.030 GT:AD:DP:GQ:PL 0/1:20,17:37:99:565,0,656 chr1 40642027 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 40649999 . T C 96.28 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.48;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:9:124,9,0 chr1 40650287 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 40654103 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 40667386 . G A 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr1 40675313 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 40691579 . T C 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.421;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.59;ReadPosRankSum=1.651;SOR=1.179 GT:AD:DP:GQ:PL 0/1:21,9:30:99:286,0,719 chr1 40738897 . C T 1022.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.699;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=4.411;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=-0.933;SOR=1.147 GT:AD:DP:GQ:PL 0/1:35,43:78:99:1051,0,855 chr1 40739162 . C T 556.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.460;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.31;ReadPosRankSum=0.313;SOR=0.806 GT:AD:DP:GQ:PL 0/1:41,26:67:99:585,0,1087 chr1 40747278 . G A 323.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.86;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:352,27,0 chr1 40749493 . A G 2850.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.013;ClippingRankSum=0.000;DP=241;ExcessHet=3.0103;FS=1.589;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.83;ReadPosRankSum=-2.095;SOR=0.833 GT:AD:DP:GQ:PL 0/1:128,113:241:99:2879,0,3364 chr1 40753116 . A G 719.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.947;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=1.181;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.80;ReadPosRankSum=0.398;SOR=0.941 GT:AD:DP:GQ:PL 0/1:36,25:61:99:748,0,1144 chr1 40754724 . G A 304.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.71;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:333,24,0 chr1 40757636 . G T 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.566;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,176 chr1 40758204 . C T 1082.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.490;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=13.542;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.69;ReadPosRankSum=0.465;SOR=2.508 GT:AD:DP:GQ:PL 0/1:35,34:69:99:1111,0,982 chr1 40762771 . C G 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.30;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 40771716 . A G 616.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.340;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=6.259;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.63;ReadPosRankSum=-1.117;SOR=2.121 GT:AD:DP:GQ:PL 0/1:37,21:58:99:645,0,1167 chr1 40792240 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 40802428 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 40811960 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 40818694 . G C 3692.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.57;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3721,330,0 chr1 40818734 . A G 2871.77 PASS AC=2;AF=1.00;AN=2;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=1.836 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2900,261,0 chr1 40818837 . C G 551.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.30;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:580,42,0 chr1 40818848 . A G 501.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.21;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:530,36,0 chr1 40818855 . T G 460.77 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.00;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:33:489,33,0 chr1 40819162 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 40819192 . G A 233.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.38;ReadPosRankSum=-2.128;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,7:10:95:262,0,95 chr1 40819415 . T C 5354.77 PASS AC=2;AF=1.00;AN=2;DP=164;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.65;SOR=1.091 GT:AD:DP:GQ:PL 1/1:0,164:164:99:5383,492,0 chr1 40820681 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 40823533 . G C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.60;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 40823542 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 40823907 . C T 131.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.227;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.41;ReadPosRankSum=-0.441;SOR=0.976 GT:AD:DP:GQ:PL 0/1:8,6:14:99:160,0,280 chr1 40826351 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 40832838 . G A 1866.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.61;SOR=4.849 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1895,141,0 chr1 40832980 . T C 12320.77 PASS AC=2;AF=1.00;AN=2;DP=375;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.86;SOR=1.565 GT:AD:DP:GQ:PL 1/1:0,375:375:99:12349,1125,0 chr1 40833186 . A G 2550.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.023;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.94;MQRankSum=1.060;QD=16.67;ReadPosRankSum=1.068;SOR=0.696 GT:AD:DP:GQ:PL 0/1:73,80:153:99:2579,0,2312 chr1 40834754 . C T 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=-1.111;SOR=0.836 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,262 chr1 40834864 . G A 930.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.536;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.58;ReadPosRankSum=0.607;SOR=0.648 GT:AD:DP:GQ:PL 0/1:40,34:74:99:959,0,1209 chr1 40835280 . C A 294.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.119;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.74;ReadPosRankSum=-1.132;SOR=0.467 GT:AD:DP:GQ:PL 0/1:8,12:20:99:323,0,240 chr1 40835354 . G C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=1.036;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 40838232 . G A 699.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.349;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.87;ReadPosRankSum=0.192;SOR=1.085 GT:AD:DP:GQ:PL 0/1:10,22:32:99:728,0,276 chr1 40845735 . C A 289.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.088;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.32;ReadPosRankSum=0.278;SOR=0.582 GT:AD:DP:GQ:PL 0/1:3,12:15:46:318,0,46 chr1 40853474 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 40862201 . G C 370.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.90;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,12:12:36:399,36,0 chr1 40882644 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 40882663 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 40888600 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 40889903 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 40906311 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 40909492 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 40983630 . T C 351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.038;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.56;ReadPosRankSum=-2.044;SOR=0.693 GT:AD:DP:GQ:PL 0/1:14,14:28:99:380,0,445 chr1 40987208 . G A 177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.105;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.67;ReadPosRankSum=-0.664;SOR=1.609 GT:AD:DP:GQ:PL 0/1:7,6:13:99:206,0,219 chr1 40988753 . G A 1011.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.585;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.67;ReadPosRankSum=-0.134;SOR=0.693 GT:AD:DP:GQ:PL 0/1:40,34:74:99:1040,0,1199 chr1 40991017 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr1 41002085 . G C 2419.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.579;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=2.043;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.12;ReadPosRankSum=-1.260;SOR=0.534 GT:AD:DP:GQ:PL 0/1:70,90:160:99:2448,0,1851 chr1 41017962 . G C 2885.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.946;ClippingRankSum=0.000;DP=229;ExcessHet=3.0103;FS=0.485;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.66;ReadPosRankSum=-1.222;SOR=0.644 GT:AD:DP:GQ:PL 0/1:123,105:228:99:2914,0,3443 chr1 41034310 . G A 144.85 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.14;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:17:173,17,0 chr1 41075181 . A T 6558.77 PASS AC=2;AF=1.00;AN=2;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.17;SOR=1.422 GT:AD:DP:GQ:PL 1/1:0,145:145:99:6587,445,0 chr1 41075189 . T C 7158.77 PASS AC=2;AF=1.00;AN=2;DP=165;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.00;SOR=1.353 GT:AD:DP:GQ:PL 1/1:0,165:165:99:7187,497,0 chr1 41117397 . A G 294.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.80;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:33:323,33,0 chr1 41117854 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 41146431 . C A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 41152770 . A T 2589.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.53;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2618,225,0 chr1 41303608 . G A 246.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.875;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=7.404;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.43;ReadPosRankSum=-0.875;SOR=1.155 GT:AD:DP:GQ:PL 0/1:2,9:11:50:275,0,50 chr1 41353571 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 41353585 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 41368511 . A G 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr1 41411744 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 41416635 . A G 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.385;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=-0.524;SOR=0.892 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,250 chr1 41418050 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 41433481 . T C 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr1 41450913 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 41468468 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 41469779 . C T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr1 41483924 . G A 5170.77 PASS AC=2;AF=1.00;AN=2;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.06;SOR=2.222 GT:AD:DP:GQ:PL 1/1:0,145:145:99:5199,435,0 chr1 41483957 . A C 6904.77 PASS AC=2;AF=1.00;AN=2;DP=201;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.35;SOR=1.706 GT:AD:DP:GQ:PL 1/1:0,201:201:99:6933,602,0 chr1 41484641 . T C 3722.77 PASS AC=2;AF=1.00;AN=2;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.66;SOR=1.356 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3751,342,0 chr1 41488074 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 41497010 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 41497860 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 41498005 . A G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 41498029 . T G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 41510346 . C T 6944.77 PASS AC=2;AF=1.00;AN=2;DP=228;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.73;SOR=1.547 GT:AD:DP:GQ:PL 1/1:0,226:226:99:6973,674,0 chr1 41510657 . T C 2402.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.33;SOR=1.163 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2431,210,0 chr1 41512688 . G T 563.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.85;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,15:15:45:592,45,0 chr1 41512895 . T G 1312.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.77;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1341,111,0 chr1 41513154 . C G 6649.77 PASS AC=2;AF=1.00;AN=2;DP=200;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.25;SOR=1.063 GT:AD:DP:GQ:PL 1/1:0,200:200:99:6678,600,0 chr1 41513485 . A G 4231.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.96;SOR=0.978 GT:AD:DP:GQ:PL 1/1:0,117:117:99:4260,352,0 chr1 41518241 . C A 5056.77 PASS AC=2;AF=1.00;AN=2;DP=166;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.83;SOR=1.124 GT:AD:DP:GQ:PL 1/1:0,164:164:99:5085,484,0 chr1 41536492 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 41547347 . T G 54.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:82,9,0 chr1 41558355 . A G 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 41558365 . A T 59.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.67;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:87,6,0 chr1 41562410 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 41567443 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 41572383 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 41579631 . G A 1828.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.12;SOR=3.958 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1857,141,0 chr1 41581141 . C T 4991.77 PASS AC=2;AF=1.00;AN=2;DP=153;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.06;SOR=1.149 GT:AD:DP:GQ:PL 1/1:0,151:151:99:5020,449,0 chr1 41583074 . T C 6436.77 PASS AC=2;AF=1.00;AN=2;DP=195;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.35;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,193:193:99:6465,578,0 chr1 41583361 . G A 4824.77 PASS AC=2;AF=1.00;AN=2;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.51;SOR=0.937 GT:AD:DP:GQ:PL 1/1:0,144:144:99:4853,432,0 chr1 41583469 . C G 6390.77 PASS AC=2;AF=1.00;AN=2;DP=183;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.92;SOR=1.636 GT:AD:DP:GQ:PL 1/1:0,183:183:99:6419,548,0 chr1 41584695 . C T 2346.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.241;ClippingRankSum=0.000;DP=174;ExcessHet=3.0103;FS=2.672;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=-1.198;SOR=0.512 GT:AD:DP:GQ:PL 0/1:91,83:174:99:2375,0,2626 chr1 41654340 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 41748981 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 41807253 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 41879697 . T C 35.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.94;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:64,0,30 chr1 41891487 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 41949015 . A G 280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.457;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.55;ReadPosRankSum=2.066;SOR=0.343 GT:AD:DP:GQ:PL 0/1:5,11:16:99:309,0,127 chr1 41963173 . A G 31.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0 chr1 41978773 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 42036610 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 42040710 . T C 362.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:33:391,33,0 chr1 42040896 . G A 57.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.500;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=3.041;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.44;ReadPosRankSum=0.000;SOR=2.215 GT:AD:DP:GQ:PL 0/1:10,3:13:86:86,0,242 chr1 42041185 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.126;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 42105162 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 42153203 . G A 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.253;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr1 42153481 . C A 1528.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.820;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.07;ReadPosRankSum=-0.733;SOR=0.723 GT:AD:DP:GQ:PL 0/1:58,59:117:99:1557,0,1556 chr1 42153706 . G A 790.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.463;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=4.159;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.92;ReadPosRankSum=0.203;SOR=0.280 GT:AD:DP:GQ:PL 0/1:23,30:53:99:819,0,663 chr1 42163369 . A G 3821.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.075;ClippingRankSum=0.000;DP=258;ExcessHet=3.0103;FS=2.262;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.81;ReadPosRankSum=-0.539;SOR=0.880 GT:AD:DP:GQ:PL 0/1:126,132:258:99:3850,0,3661 chr1 42166673 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 42188688 . C T 863.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.023;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=3.086;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.61;ReadPosRankSum=-0.944;SOR=0.274 GT:AD:DP:GQ:PL 0/1:21,31:52:99:892,0,867 chr1 42188693 . G A 659.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.750;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=4.489;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.38;ReadPosRankSum=0.522;SOR=1.485 GT:AD:DP:GQ:PL 0/1:34,24:58:99:688,0,1347 chr1 42191197 . C G 1076.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.189;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.89;ReadPosRankSum=0.701;SOR=0.704 GT:AD:DP:GQ:PL 0/1:24,33:57:99:1105,0,751 chr1 42227926 . A G 1724.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.210;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=3.711;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.71;ReadPosRankSum=-1.397;SOR=0.949 GT:AD:DP:GQ:PL 0/1:92,69:161:99:1753,0,2530 chr1 42264854 . T C 723.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.25;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:752,54,0 chr1 42334969 . G C 82.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.28;ReadPosRankSum=0.000;SOR=0.850 GT:AD:DP:GQ:PL 0/1:5,5:10:99:111,0,111 chr1 42381115 . G C 548.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.681;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.44;ReadPosRankSum=-0.372;SOR=0.693 GT:AD:DP:GQ:PL 0/1:19,19:38:99:577,0,543 chr1 42399197 . C T 576.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.223;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.02;ReadPosRankSum=0.350;SOR=0.818 GT:AD:DP:GQ:PL 0/1:17,19:36:99:605,0,521 chr1 42399797 . G A 306.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.239;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.17;ReadPosRankSum=2.005;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,10:16:99:335,0,190 chr1 42400244 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 42404667 . C T 781.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.287;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.25;ReadPosRankSum=1.089;SOR=0.582 GT:AD:DP:GQ:PL 0/1:31,28:59:99:810,0,934 chr1 42413980 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 42414005 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 42414845 . T C 2926.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.634;ClippingRankSum=0.000;DP=219;ExcessHet=3.0103;FS=2.334;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.36;ReadPosRankSum=-1.787;SOR=0.870 GT:AD:DP:GQ:PL 0/1:115,104:219:99:2955,0,2985 chr1 42415195 . G A 446.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.37;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,13:13:39:475,39,0 chr1 42433000 . A G 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.74;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 42500366 . T C 3465.77 PASS AC=2;AF=1.00;AN=2;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.88;SOR=1.047 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3494,348,0 chr1 42564374 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 42580621 . G T 241.74 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.86;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,9:9:27:279,27,0 chr1 42759253 . G A 5015.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.320;ClippingRankSum=0.000;DP=362;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.89;ReadPosRankSum=-0.162;SOR=0.691 GT:AD:DP:GQ:PL 0/1:169,192:361:99:5044,0,4357 chr1 42762518 . T A 3202.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.55;SOR=2.200 GT:AD:DP:GQ:PL 1/1:0,90:90:99:3231,270,0 chr1 42767136 . C G 569.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.432;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=1.189;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=-0.262;SOR=0.941 GT:AD:DP:GQ:PL 0/1:23,21:44:99:598,0,698 chr1 42773724 . G A 601.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.963;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.57;ReadPosRankSum=-0.080;SOR=0.527 GT:AD:DP:GQ:PL 0/1:28,24:52:99:630,0,843 chr1 42780298 . A G 47.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:75,6,0 chr1 42813423 . T C 695.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.096;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.38;ReadPosRankSum=-0.414;SOR=0.814 GT:AD:DP:GQ:PL 0/1:24,28:52:99:724,0,540 chr1 42835194 . G A 1297.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.170;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=2.392;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.19;ReadPosRankSum=-0.822;SOR=0.923 GT:AD:DP:GQ:PL 0/1:64,52:116:99:1326,0,1711 chr1 42835250 . C G 2453.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.16;SOR=1.641 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2482,222,0 chr1 42837111 . C G 1561.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.859;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=3.092;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-1.324;SOR=0.459 GT:AD:DP:GQ:PL 0/1:78,62:140:99:1590,0,2197 chr1 42837300 . C G 300.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.222;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.71;ReadPosRankSum=0.617;SOR=0.269 GT:AD:DP:GQ:PL 0/1:8,10:18:99:329,0,277 chr1 42838954 . C G 1280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.770;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=2.456;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.85;ReadPosRankSum=-0.703;SOR=0.941 GT:AD:DP:GQ:PL 0/1:67,51:118:99:1309,0,1923 chr1 42840457 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 42850593 . A G 693.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.044;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.13;ReadPosRankSum=-0.633;SOR=0.479 GT:AD:DP:GQ:PL 0/1:19,24:43:99:722,0,551 chr1 42857242 . C T 252.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.28;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:30:281,30,0 chr1 42861856 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 42887014 . A G 818.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.49;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:78:847,78,0 chr1 42887542 . G A 568.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.44;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:60:597,60,0 chr1 42891038 . C T 319.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.031;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.42;ReadPosRankSum=0.611;SOR=0.871 GT:AD:DP:GQ:PL 0/1:12,16:28:99:348,0,281 chr1 42891094 . T C 958.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.96;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:90:987,90,0 chr1 42891929 . T C 552.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.71;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:54:581,54,0 chr1 42903334 . G A 214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.198;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.34;ReadPosRankSum=0.077;SOR=1.828 GT:AD:DP:GQ:PL 0/1:7,7:14:99:243,0,216 chr1 42923869 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 42934345 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 42934442 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 42936383 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 42942899 . C G 687.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.362;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=3.792;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=1.203;SOR=0.204 GT:AD:DP:GQ:PL 0/1:22,24:46:99:716,0,712 chr1 42943295 . G A 5560.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.009;ClippingRankSum=0.000;DP=401;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.87;ReadPosRankSum=-0.556;SOR=0.707 GT:AD:DP:GQ:PL 0/1:193,208:401:99:5589,0,5441 chr1 42948529 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 42952110 . C T 1353.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.026;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=1.440;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.21;ReadPosRankSum=-0.949;SOR=1.122 GT:AD:DP:GQ:PL 0/1:25,42:67:99:1382,0,741 chr1 42952355 . C T 3301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.073;ClippingRankSum=0.000;DP=275;ExcessHet=3.0103;FS=2.084;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=0.726;SOR=0.831 GT:AD:DP:GQ:PL 0/1:146,128:274:99:3330,0,4105 chr1 42958848 . T G 431.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.803;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.958;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.27;ReadPosRankSum=-1.233;SOR=0.368 GT:AD:DP:GQ:PL 0/1:7,18:25:99:460,0,183 chr1 42963672 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 42999026 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 43007582 . C T 58.18 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.64;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:10:86,0,10 chr1 43027273 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 43027327 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 43069342 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 43087811 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 43137465 . C A 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 43145239 . T G 6874.77 PASS AC=2;AF=1.00;AN=2;DP=201;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.20;SOR=0.996 GT:AD:DP:GQ:PL 1/1:0,201:201:99:6903,603,0 chr1 43145559 . G T 645.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.59;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:51:674,51,0 chr1 43148137 . A G 1022.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.798;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=21.581;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.44;ReadPosRankSum=-1.384;SOR=0.942 GT:AD:DP:GQ:PL 0/1:57,41:98:99:1051,0,1247 chr1 43151082 . C T 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.13;ReadPosRankSum=-1.282;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:137,0,65 chr1 43153055 . A G 5908.77 PASS AC=2;AF=1.00;AN=2;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.55;SOR=2.316 GT:AD:DP:GQ:PL 1/1:0,171:171:99:5937,513,0 chr1 43153298 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 43155874 . G A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 43155962 . C T 350.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.057;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.49;ReadPosRankSum=0.977;SOR=0.527 GT:AD:DP:GQ:PL 0/1:6,12:18:99:379,0,162 chr1 43156088 . G T 1043.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.024;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=1.963;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.35;ReadPosRankSum=-0.444;SOR=0.997 GT:AD:DP:GQ:PL 0/1:54,38:92:99:1072,0,1638 chr1 43164154 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 43164286 . G A 162.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.413;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.08;ReadPosRankSum=-0.873;SOR=0.416 GT:AD:DP:GQ:PL 0/1:15,8:23:99:191,0,455 chr1 43164485 . A C 495.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.169;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=2.622;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.78;ReadPosRankSum=0.673;SOR=0.330 GT:AD:DP:GQ:PL 0/1:24,22:46:99:524,0,729 chr1 43164870 . C A 489.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.838;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=2.881;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=1.285;SOR=0.319 GT:AD:DP:GQ:PL 0/1:25,20:45:99:518,0,736 chr1 43166682 . C G 1269.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.69;SOR=6.736 GT:AD:DP:GQ:PL 1/1:0,28:28:87:1298,87,0 chr1 43166683 . A C 1269.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.12;SOR=6.804 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1298,87,0 chr1 43166954 . T C 1354.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.839;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=3.550;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.99;ReadPosRankSum=-1.133;SOR=1.055 GT:AD:DP:GQ:PL 0/1:60,53:113:99:1383,0,1719 chr1 43172765 . G T 1287.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.353;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=8.711;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.64;ReadPosRankSum=-1.708;SOR=1.407 GT:AD:DP:GQ:PL 0/1:71,50:121:99:1316,0,1849 chr1 43177317 . G A 1143.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.706;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=2.980;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.57;ReadPosRankSum=0.206;SOR=1.071 GT:AD:DP:GQ:PL 0/1:48,43:91:99:1172,0,1191 chr1 43181364 . A G 605.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:634,48,0 chr1 43183665 . T C 3934.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.350;ClippingRankSum=0.000;DP=320;ExcessHet=3.0103;FS=0.404;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.30;ReadPosRankSum=1.724;SOR=0.725 GT:AD:DP:GQ:PL 0/1:167,153:320:99:3963,0,4198 chr1 43183722 . T C 8968.77 PASS AC=2;AF=1.00;AN=2;DP=257;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.90;SOR=1.126 GT:AD:DP:GQ:PL 1/1:0,257:257:99:8997,772,0 chr1 43183837 . A G 4809.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.85;SOR=1.806 GT:AD:DP:GQ:PL 1/1:0,138:138:99:4838,415,0 chr1 43185070 . T C 1865.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.32;SOR=1.919 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1894,168,0 chr1 43185560 . C T 95.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:123,12,0 chr1 43186463 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 43186514 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.88;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 43186551 . C T 529.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.44;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,15:15:45:558,45,0 chr1 43186698 . T C 4937.77 PASS AC=2;AF=1.00;AN=2;DP=158;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.45;SOR=1.565 GT:AD:DP:GQ:PL 1/1:0,157:157:99:4966,466,0 chr1 43186771 . G C 2552.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.844;ClippingRankSum=0.000;DP=225;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.35;ReadPosRankSum=-0.408;SOR=0.717 GT:AD:DP:GQ:PL 0/1:120,105:225:99:2581,0,3157 chr1 43187045 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 43197397 . G A 1169.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.83;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1198,99,0 chr1 43202895 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 43215184 . G A 3597.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.14;SOR=3.430 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3626,286,0 chr1 43219133 . C T 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=0.566;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,137 chr1 43227312 . A T 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=-0.520;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,179 chr1 43233100 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 43234264 . C T 6946.77 PASS AC=2;AF=1.00;AN=2;DP=207;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.56;SOR=1.890 GT:AD:DP:GQ:PL 1/1:0,207:207:99:6975,620,0 chr1 43234469 . A G 5118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.672;ClippingRankSum=0.000;DP=356;ExcessHet=3.0103;FS=2.284;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.42;ReadPosRankSum=0.382;SOR=0.573 GT:AD:DP:GQ:PL 0/1:162,193:355:99:5147,0,4193 chr1 43272669 . A C 2343.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.55;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2372,216,0 chr1 43274358 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 43276737 . T C 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,73 chr1 43282461 . A G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.28;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 43283479 . C T 386.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.148;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.92;ReadPosRankSum=0.910;SOR=0.634 GT:AD:DP:GQ:PL 0/1:23,16:39:99:415,0,639 chr1 43296755 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 43305419 . G A 3561.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.844;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=1.183;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.42;ReadPosRankSum=-1.044;SOR=0.801 GT:AD:DP:GQ:PL 0/1:109,122:231:99:3590,0,3017 chr1 43306519 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 43307362 . A G 2299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.541;ClippingRankSum=0.000;DP=173;ExcessHet=3.0103;FS=1.246;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.29;ReadPosRankSum=-0.109;SOR=0.811 GT:AD:DP:GQ:PL 0/1:96,77:173:99:2328,0,2903 chr1 43308621 . C T 278.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.726;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=9.901;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.40;ReadPosRankSum=-0.499;SOR=0.027 GT:AD:DP:GQ:PL 0/1:6,11:17:99:307,0,155 chr1 43308766 . G A 781.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.346;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.42;ReadPosRankSum=0.810;SOR=0.721 GT:AD:DP:GQ:PL 0/1:41,34:75:99:810,0,1187 chr1 43309207 . C T 1349.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.034;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=1.919;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=0.571;SOR=1.007 GT:AD:DP:GQ:PL 0/1:36,43:79:99:1378,0,1102 chr1 43309991 . A G 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 43312181 . C T 2979.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.211;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=2.505;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.10;ReadPosRankSum=0.563;SOR=0.974 GT:AD:DP:GQ:PL 0/1:64,92:156:99:3008,0,2091 chr1 43313893 . T C 1618.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.714;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=0.624;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.79;ReadPosRankSum=-1.272;SOR=0.771 GT:AD:DP:GQ:PL 0/1:85,65:150:99:1647,0,2209 chr1 43314198 . T G 1360.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.457;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.67;ReadPosRankSum=0.055;SOR=0.603 GT:AD:DP:GQ:PL 0/1:28,49:77:99:1389,0,605 chr1 43314264 . G A 813.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.895;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=1.740;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.75;ReadPosRankSum=-0.309;SOR=0.815 GT:AD:DP:GQ:PL 0/1:58,35:93:99:842,0,1477 chr1 43317175 . G A 1702.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.466;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.86;ReadPosRankSum=-0.855;SOR=0.643 GT:AD:DP:GQ:PL 0/1:42,59:101:99:1731,0,1287 chr1 43319285 . A G 3551.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.642;ClippingRankSum=0.000;DP=255;ExcessHet=3.0103;FS=0.980;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.98;ReadPosRankSum=-0.847;SOR=0.762 GT:AD:DP:GQ:PL 0/1:118,136:254:99:3580,0,3210 chr1 43321050 . A C 259.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.389;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.43;ReadPosRankSum=0.882;SOR=0.473 GT:AD:DP:GQ:PL 0/1:9,9:18:99:297,0,301 chr1 43322501 . T C 445.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.712;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=3.617;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.38;ReadPosRankSum=-0.361;SOR=2.179 GT:AD:DP:GQ:PL 0/1:10,13:23:99:474,0,300 chr1 43337551 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 43346404 . G A 1100.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.959;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=7.056;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=0.421;SOR=0.276 GT:AD:DP:GQ:PL 0/1:48,47:95:99:1129,0,1233 chr1 43349193 . T C 937.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.396;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=4.858;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.02;ReadPosRankSum=0.367;SOR=0.307 GT:AD:DP:GQ:PL 0/1:38,34:72:99:966,0,1057 chr1 43352306 . G A 1175.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.278;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=6.373;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.11;ReadPosRankSum=-0.726;SOR=0.766 GT:AD:DP:GQ:PL 0/1:27,46:73:99:1204,0,738 chr1 43359973 . T C 3260.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.113;ClippingRankSum=0.000;DP=214;ExcessHet=3.0103;FS=2.388;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.38;ReadPosRankSum=-0.862;SOR=0.887 GT:AD:DP:GQ:PL 0/1:104,108:212:99:3289,0,3162 chr1 43360641 . C A 4741.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.712;ClippingRankSum=0.000;DP=344;ExcessHet=3.0103;FS=3.491;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.78;ReadPosRankSum=-0.769;SOR=0.887 GT:AD:DP:GQ:PL 0/1:178,166:344:99:4770,0,4755 chr1 43367703 . T A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.674;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:54:72,0,54 chr1 43384802 . A G 248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.537;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.37;ReadPosRankSum=-1.113;SOR=0.392 GT:AD:DP:GQ:PL 0/1:14,10:24:99:277,0,444 chr1 43389875 . A G 3579.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.464;ClippingRankSum=0.000;DP=275;ExcessHet=3.0103;FS=0.925;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.02;ReadPosRankSum=0.657;SOR=0.781 GT:AD:DP:GQ:PL 0/1:141,134:275:99:3608,0,3655 chr1 43389907 . G C 3040.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.272;ClippingRankSum=0.000;DP=225;ExcessHet=3.0103;FS=8.910;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.51;ReadPosRankSum=1.700;SOR=1.217 GT:AD:DP:GQ:PL 0/1:120,105:225:99:3069,0,3109 chr1 43403564 . G C 2367.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.362;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=0.150;SOR=0.711 GT:AD:DP:GQ:PL 0/1:75,90:165:99:2396,0,2058 chr1 43406396 . C T 1680.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.882;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=4.221;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.27;ReadPosRankSum=0.823;SOR=1.115 GT:AD:DP:GQ:PL 0/1:75,62:137:99:1709,0,1878 chr1 43416270 . A G 623.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.958;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.95;ReadPosRankSum=-0.552;SOR=1.609 GT:AD:DP:GQ:PL 0/1:6,19:25:99:652,0,176 chr1 43420650 . A G 607.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.193;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.05;ReadPosRankSum=-0.885;SOR=0.917 GT:AD:DP:GQ:PL 0/1:35,20:55:99:636,0,1250 chr1 43420823 . C T 5816.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.812;ClippingRankSum=0.000;DP=479;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.17;ReadPosRankSum=0.996;SOR=0.706 GT:AD:DP:GQ:PL 0/1:243,235:478:99:5845,0,6419 chr1 43421475 . G A 326.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.355;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.10;ReadPosRankSum=-0.219;SOR=0.495 GT:AD:DP:GQ:PL 0/1:15,12:27:99:355,0,512 chr1 43422931 . G A 773.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.977;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.48;ReadPosRankSum=0.293;SOR=0.804 GT:AD:DP:GQ:PL 0/1:24,26:50:99:802,0,676 chr1 43426518 . G A 1541.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.079;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=2.942;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.82;ReadPosRankSum=-0.230;SOR=0.964 GT:AD:DP:GQ:PL 0/1:94,63:157:99:1570,0,2427 chr1 43435340 . A C 2343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.371;ClippingRankSum=0.000;DP=189;ExcessHet=3.0103;FS=6.078;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.40;ReadPosRankSum=-0.578;SOR=0.356 GT:AD:DP:GQ:PL 0/1:102,87:189:99:2372,0,2935 chr1 43437918 . G T 1514.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.770;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=0.820;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-0.952;SOR=0.595 GT:AD:DP:GQ:PL 0/1:68,54:122:99:1543,0,2107 chr1 43438024 . A G 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=0.566;SOR=0.473 GT:AD:DP:GQ:PL 0/1:8,6:14:99:208,0,292 chr1 43438645 . A G 794.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.530;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=3.212;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.06;ReadPosRankSum=0.567;SOR=1.828 GT:AD:DP:GQ:PL 0/1:21,23:44:99:823,0,711 chr1 43440148 . T C 1583.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.794;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=1.506;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=-0.217;SOR=0.514 GT:AD:DP:GQ:PL 0/1:60,63:123:99:1612,0,1722 chr1 43441225 . A G 2174.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.591;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=4.829;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.94;ReadPosRankSum=0.430;SOR=1.107 GT:AD:DP:GQ:PL 0/1:77,79:156:99:2203,0,1956 chr1 43442421 . A T 3573.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.136;ClippingRankSum=0.000;DP=282;ExcessHet=3.0103;FS=0.906;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.67;ReadPosRankSum=0.078;SOR=0.669 GT:AD:DP:GQ:PL 0/1:142,140:282:99:3602,0,3665 chr1 43443275 . A C 3421.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.446;ClippingRankSum=0.000;DP=248;ExcessHet=3.0103;FS=5.940;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.80;ReadPosRankSum=-1.661;SOR=1.025 GT:AD:DP:GQ:PL 0/1:125,123:248:99:3450,0,3333 chr1 43443594 . T C 4020.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.855;ClippingRankSum=0.000;DP=298;ExcessHet=3.0103;FS=1.976;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.54;ReadPosRankSum=0.671;SOR=0.837 GT:AD:DP:GQ:PL 0/1:150,147:297:99:4049,0,3940 chr1 43446919 . A G 1916.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.668;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=0.758;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.67;ReadPosRankSum=0.766;SOR=0.568 GT:AD:DP:GQ:PL 0/1:44,71:115:99:1945,0,1293 chr1 43450971 . T C 3594.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.745;ClippingRankSum=0.000;DP=249;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.50;ReadPosRankSum=1.102;SOR=0.688 GT:AD:DP:GQ:PL 0/1:121,127:248:99:3623,0,3296 chr1 43451738 . T C 3519.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.789;ClippingRankSum=0.000;DP=256;ExcessHet=3.0103;FS=0.456;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.80;ReadPosRankSum=1.150;SOR=0.645 GT:AD:DP:GQ:PL 0/1:126,129:255:99:3548,0,3266 chr1 43451966 . G A 3285.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.048;ClippingRankSum=0.000;DP=277;ExcessHet=3.0103;FS=0.439;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=1.075;SOR=0.648 GT:AD:DP:GQ:PL 0/1:152,125:277:99:3314,0,4058 chr1 43453742 . A G 332.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.096;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.76;ReadPosRankSum=1.489;SOR=0.602 GT:AD:DP:GQ:PL 0/1:25,13:38:99:361,0,794 chr1 43499283 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 43546066 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 43547684 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 43554060 . C T 2508.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.80;SOR=6.869 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2537,187,0 chr1 43557944 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 43558813 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 43568097 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 43569422 . A G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.703;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=4.260;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.97;ReadPosRankSum=-1.029;SOR=0.061 GT:AD:DP:GQ:PL 0/1:5,3:8:68:68,0,153 chr1 43597579 . T C 586.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,18:18:54:615,54,0 chr1 43606125 . G T 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.315;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=3.244;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.84;ReadPosRankSum=0.309;SOR=0.127 GT:AD:DP:GQ:PL 0/1:19,7:26:99:180,0,712 chr1 43606182 . T C 860.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.415;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.66;ReadPosRankSum=-0.475;SOR=0.706 GT:AD:DP:GQ:PL 0/1:41,27:68:99:889,0,1470 chr1 43606749 . A G 803.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.182;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=1.971;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=-1.212;SOR=1.034 GT:AD:DP:GQ:PL 0/1:43,31:74:99:832,0,1133 chr1 43609163 . C T 352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.909;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.03;ReadPosRankSum=-0.035;SOR=1.751 GT:AD:DP:GQ:PL 0/1:11,11:22:99:381,0,393 chr1 43609556 . T C 4524.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.76;SOR=3.804 GT:AD:DP:GQ:PL 1/1:0,120:120:99:4553,360,0 chr1 43613290 . G C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.598;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 43617344 . G A 357.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.530;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=3.188;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.31;ReadPosRankSum=-0.858;SOR=0.169 GT:AD:DP:GQ:PL 0/1:13,12:25:99:386,0,436 chr1 43617439 . C T 1989.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.883;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=1.561;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.92;ReadPosRankSum=-1.654;SOR=0.548 GT:AD:DP:GQ:PL 0/1:53,72:125:99:2018,0,1521 chr1 43617836 . T C 3033.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.756;ClippingRankSum=0.000;DP=272;ExcessHet=3.0103;FS=9.589;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.19;ReadPosRankSum=-0.349;SOR=1.164 GT:AD:DP:GQ:PL 0/1:155,116:271:99:3062,0,4012 chr1 43617848 . G A 2939.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.981;ClippingRankSum=0.000;DP=266;ExcessHet=3.0103;FS=5.025;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.09;ReadPosRankSum=-0.546;SOR=0.999 GT:AD:DP:GQ:PL 0/1:152,113:265:99:2968,0,4122 chr1 43619068 . C T 4510.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.461;ClippingRankSum=0.000;DP=359;ExcessHet=3.0103;FS=10.429;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.60;ReadPosRankSum=1.861;SOR=0.827 GT:AD:DP:GQ:PL 0/1:178,180:358:99:4539,0,5025 chr1 43620409 . T C 3022.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.847;ClippingRankSum=0.000;DP=210;ExcessHet=3.0103;FS=4.933;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=0.511;SOR=1.024 GT:AD:DP:GQ:PL 0/1:102,108:210:99:3051,0,2730 chr1 43621160 . C T 6695.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.128;ClippingRankSum=0.000;DP=487;ExcessHet=3.0103;FS=0.518;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.81;ReadPosRankSum=0.451;SOR=0.733 GT:AD:DP:GQ:PL 0/1:240,245:485:99:6724,0,6409 chr1 43621825 . C T 3278.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.051;ClippingRankSum=0.000;DP=276;ExcessHet=3.0103;FS=2.826;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.88;ReadPosRankSum=-0.270;SOR=0.904 GT:AD:DP:GQ:PL 0/1:150,126:276:99:3307,0,4106 chr1 43622218 . T C 262.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.389;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.77;ReadPosRankSum=1.204;SOR=2.303 GT:AD:DP:GQ:PL 0/1:6,8:14:99:291,0,174 chr1 43628957 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 43667628 . C T 411.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.847;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.11;ReadPosRankSum=0.365;SOR=0.340 GT:AD:DP:GQ:PL 0/1:21,13:34:99:440,0,742 chr1 43671586 . C A 2516.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.743;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=1.217;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.68;ReadPosRankSum=-0.156;SOR=0.588 GT:AD:DP:GQ:PL 0/1:91,93:184:99:2545,0,2701 chr1 43694387 . G A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.674;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 43694441 . G A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 43700009 . G A 524.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.235;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.117;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.50;ReadPosRankSum=-0.024;SOR=0.432 GT:AD:DP:GQ:PL 0/1:25,25:50:99:553,0,619 chr1 43700826 . A G 1114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.577;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.843;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.27;ReadPosRankSum=-1.273;SOR=0.878 GT:AD:DP:GQ:PL 0/1:41,43:84:99:1143,0,895 chr1 43700886 . C G 637.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.855;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=5.385;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.86;ReadPosRankSum=-0.869;SOR=1.781 GT:AD:DP:GQ:PL 0/1:24,22:46:99:666,0,628 chr1 43702399 . G A 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.025;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=0.355;SOR=0.160 GT:AD:DP:GQ:PL 0/1:5,5:10:99:145,0,167 chr1 43702561 . T C 926.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.845;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.825;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.97;ReadPosRankSum=-0.340;SOR=0.850 GT:AD:DP:GQ:PL 0/1:54,39:93:99:955,0,1359 chr1 43703582 . G C 3105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.017;ClippingRankSum=0.000;DP=220;ExcessHet=3.0103;FS=12.914;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.12;ReadPosRankSum=0.694;SOR=1.399 GT:AD:DP:GQ:PL 0/1:112,108:220:99:3134,0,3290 chr1 43717659 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 43728545 . T G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 43792369 . A G 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr1 43814709 . A T 1607.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.81;SOR=2.448 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1636,147,0 chr1 43814753 . T G 993.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.254;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.858;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.91;ReadPosRankSum=1.022;SOR=0.805 GT:AD:DP:GQ:PL 0/1:36,41:77:99:1022,0,879 chr1 43817399 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.88;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 43817794 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 43817825 . T C 49.79 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.45;ReadPosRankSum=1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:22:78,0,22 chr1 43851873 . C T 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=1.180;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,214 chr1 43858064 . T C 3162.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.63;SOR=1.345 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3191,300,0 chr1 43858388 . G A 293.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.86;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:322,24,0 chr1 43859737 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 43879620 . G A 396.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.17;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:425,33,0 chr1 43894155 . A G 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.253;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr1 43899857 . G A 1977.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.70;SOR=1.823 GT:AD:DP:GQ:PL 1/1:0,57:57:99:2006,171,0 chr1 43920633 . C T 1565.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.91;SOR=2.362 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1594,117,0 chr1 43920943 . A G 6504.77 PASS AC=2;AF=1.00;AN=2;DP=189;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.42;SOR=2.097 GT:AD:DP:GQ:PL 1/1:0,189:189:99:6533,566,0 chr1 43929637 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 43930114 . C T 9066.77 PASS AC=2;AF=1.00;AN=2;DP=275;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.09;SOR=1.251 GT:AD:DP:GQ:PL 1/1:0,274:274:99:9095,822,0 chr1 43933504 . A T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 43935712 . A G 5222.77 PASS AC=2;AF=1.00;AN=2;DP=158;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.27;SOR=1.565 GT:AD:DP:GQ:PL 1/1:0,157:157:99:5251,471,0 chr1 43935893 . A T 821.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.308;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.27;ReadPosRankSum=0.679;SOR=0.646 GT:AD:DP:GQ:PL 0/1:48,32:80:99:850,0,1348 chr1 43936893 . G A 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.74;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr1 43943297 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 43944271 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 43948751 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 43949743 . C T 6923.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.867;ClippingRankSum=0.000;DP=527;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.14;ReadPosRankSum=0.567;SOR=0.730 GT:AD:DP:GQ:PL 0/1:278,249:527:99:6952,0,7720 chr1 43960353 . G A 4071.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.449;ClippingRankSum=0.000;DP=339;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=0.321;SOR=0.679 GT:AD:DP:GQ:PL 0/1:177,161:338:99:4100,0,4527 chr1 43961151 . C T 1551.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.693;ClippingRankSum=0.000;DP=148;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.48;ReadPosRankSum=-0.785;SOR=0.714 GT:AD:DP:GQ:PL 0/1:87,61:148:99:1580,0,2367 chr1 43961276 . G A 3601.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.32;SOR=1.219 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3630,345,0 chr1 43966828 . C G 2133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.506;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=6.285;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.61;ReadPosRankSum=0.127;SOR=1.237 GT:AD:DP:GQ:PL 0/1:68,78:146:99:2162,0,1784 chr1 43967712 . C T 1403.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.219;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=0.795;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.47;ReadPosRankSum=-1.881;SOR=0.546 GT:AD:DP:GQ:PL 0/1:43,54:97:99:1432,0,1198 chr1 43972724 . A C 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.75;ReadPosRankSum=0.366;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:98:224,0,98 chr1 43976849 . A C 2765.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.281;ClippingRankSum=0.000;DP=191;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.48;ReadPosRankSum=-0.521;SOR=0.655 GT:AD:DP:GQ:PL 0/1:95,96:191:99:2794,0,2789 chr1 43977258 . A G 3254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.173;ClippingRankSum=0.000;DP=250;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.02;ReadPosRankSum=-1.452;SOR=0.693 GT:AD:DP:GQ:PL 0/1:125,125:250:99:3283,0,3352 chr1 43977787 . G A 568.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.744;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.73;ReadPosRankSum=1.460;SOR=0.826 GT:AD:DP:GQ:PL 0/1:14,20:34:99:597,0,349 chr1 43980962 . A G 355.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.77;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:384,30,0 chr1 43980979 . T C 265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.875;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.15;ReadPosRankSum=0.325;SOR=0.818 GT:AD:DP:GQ:PL 0/1:3,9:12:89:294,0,89 chr1 43990888 . G A 94.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.80;ReadPosRankSum=-0.674;SOR=0.368 GT:AD:DP:GQ:PL 0/1:1,5:6:24:123,0,24 chr1 43991543 . G A 759.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.132;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.60;MQRankSum=0.966;QD=14.07;ReadPosRankSum=0.331;SOR=0.799 GT:AD:DP:GQ:PL 0/1:29,25:54:99:788,0,942 chr1 43991633 . G A 1434.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.278;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=1.428;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.21;ReadPosRankSum=-0.070;SOR=0.842 GT:AD:DP:GQ:PL 0/1:70,58:128:99:1463,0,1825 chr1 43991797 . G A 2382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.276;ClippingRankSum=0.000;DP=165;ExcessHet=3.0103;FS=1.215;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.44;ReadPosRankSum=-0.068;SOR=0.807 GT:AD:DP:GQ:PL 0/1:74,91:165:99:2411,0,1970 chr1 43997738 . C T 2738.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.015;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=3.669;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.02;ReadPosRankSum=-0.411;SOR=1.025 GT:AD:DP:GQ:PL 0/1:79,92:171:99:2767,0,2191 chr1 44002449 . G A 3630.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.759;ClippingRankSum=0.000;DP=241;ExcessHet=3.0103;FS=3.605;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.07;ReadPosRankSum=0.663;SOR=0.937 GT:AD:DP:GQ:PL 0/1:113,128:241:99:3659,0,3064 chr1 44008664 . A G 2784.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-4.210;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=19.098;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.74;ReadPosRankSum=1.569;SOR=0.085 GT:AD:DP:GQ:PL 0/1:63,94:157:99:2813,0,2057 chr1 44010315 . T C 426.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.26;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:455,33,0 chr1 44014338 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 44030157 . C T 96.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:124,9,0 chr1 44103490 . A G 1592.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.89;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1621,141,0 chr1 44104578 . A G 370.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.90;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:36:399,36,0 chr1 44116424 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 44122223 . C T 280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.447;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.52;ReadPosRankSum=-0.230;SOR=1.402 GT:AD:DP:GQ:PL 0/1:2,9:11:50:309,0,50 chr1 44129852 . C G 5034.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.726;ClippingRankSum=0.000;DP=290;ExcessHet=3.0103;FS=3.187;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.42;ReadPosRankSum=-1.152;SOR=0.708 GT:AD:DP:GQ:PL 0/1:155,134:289:99:5063,0,8089 chr1 44129853 . G A 5034.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.887;ClippingRankSum=0.000;DP=288;ExcessHet=3.0103;FS=3.885;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.54;ReadPosRankSum=-1.412;SOR=0.686 GT:AD:DP:GQ:PL 0/1:153,134:287:99:5063,0,8089 chr1 44130793 . C T 1998.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.361;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=3.337;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.38;ReadPosRankSum=0.620;SOR=1.139 GT:AD:DP:GQ:PL 0/1:64,66:130:99:2027,0,1880 chr1 44213884 . A G 6039.77 PASS AC=2;AF=1.00;AN=2;DP=190;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.79;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,190:190:99:6068,570,0 chr1 44215047 . G C 3750.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.979;ClippingRankSum=0.000;DP=279;ExcessHet=3.0103;FS=0.442;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=0.716;SOR=0.657 GT:AD:DP:GQ:PL 0/1:146,133:279:99:3779,0,4141 chr1 44219542 . A G 2217.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.704;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=1.972;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.97;ReadPosRankSum=-0.064;SOR=0.899 GT:AD:DP:GQ:PL 0/1:91,80:171:99:2246,0,2466 chr1 44220005 . G A 1993.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.623;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=4.183;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.10;ReadPosRankSum=0.235;SOR=1.066 GT:AD:DP:GQ:PL 0/1:61,71:132:99:2022,0,1742 chr1 44220650 . T C 3370.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.457;ClippingRankSum=0.000;DP=209;ExcessHet=3.0103;FS=0.526;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.13;ReadPosRankSum=0.765;SOR=0.766 GT:AD:DP:GQ:PL 0/1:93,116:209:99:3399,0,2540 chr1 44300943 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 44308615 . T C 74.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.46;ReadPosRankSum=0.842;SOR=0.368 GT:AD:DP:GQ:PL 0/1:2,4:6:64:103,0,64 chr1 44322726 . A T 3224.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.91;SOR=1.122 GT:AD:DP:GQ:PL 1/1:0,98:98:99:3253,293,0 chr1 44340160 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 44352665 . G T 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.97;ReadPosRankSum=-1.180;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:86:208,0,86 chr1 44354647 . A G 218.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.42;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:247,18,0 chr1 44367616 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 44489240 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 44504019 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 44520644 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 44520723 . C A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 44520783 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 44523984 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 44563472 . T A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 44563473 . G T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.04;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 44577069 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 44593556 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 44610667 . C G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 44613482 . C T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 44617153 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 44621723 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 44622957 . G A 1430.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.36;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1459,120,0 chr1 44635806 . T C 1740.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.33;SOR=1.828 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1769,132,0 chr1 44651313 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 44654870 . C T 3544.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.372;ClippingRankSum=0.000;DP=266;ExcessHet=3.0103;FS=2.723;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.33;ReadPosRankSum=1.047;SOR=0.529 GT:AD:DP:GQ:PL 0/1:140,126:266:99:3573,0,4061 chr1 44655373 . T C 1380.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.59;SOR=3.855 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1409,111,0 chr1 44674244 . C A 1505.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.177;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=3.286;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.32;ReadPosRankSum=0.181;SOR=1.036 GT:AD:DP:GQ:PL 0/1:75,58:133:99:1534,0,2085 chr1 44675973 . C G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 44696230 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 44700711 . T C 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.19;ReadPosRankSum=0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:101,0,30 chr1 44700841 . T A 839.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.008;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.84;ReadPosRankSum=-1.002;SOR=0.368 GT:AD:DP:GQ:PL 0/1:26,27:53:99:868,0,877 chr1 44724421 . G A 388.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.300;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=2.515;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=-0.461;SOR=0.191 GT:AD:DP:GQ:PL 0/1:16,12:28:99:417,0,549 chr1 44739295 . G C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 44739651 . A G 740.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.68;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,19:19:57:769,57,0 chr1 44739926 . T C 9262.77 PASS AC=2;AF=1.00;AN=2;DP=297;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.29;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,296:296:99:9291,887,0 chr1 44743726 . G T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 44750233 . T G 677.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.47;SOR=1.708 GT:AD:DP:GQ:PL 1/1:0,23:23:69:706,69,0 chr1 44750366 . C G 4253.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=2.362 GT:AD:DP:GQ:PL 1/1:0,121:121:99:4282,362,0 chr1 44753223 . A T 8818.77 PASS AC=2;AF=1.00;AN=2;DP=279;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.72;SOR=0.814 GT:AD:DP:GQ:PL 1/1:0,278:278:99:8847,833,0 chr1 44755760 . C T 173.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:202,15,0 chr1 44757244 . A G 198.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.14;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:227,18,0 chr1 44758335 . G T 2351.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.08;SOR=2.406 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2380,207,0 chr1 44759085 . G A 2380.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.19;SOR=8.155 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2409,175,0 chr1 44759326 . A C 13658.77 PASS AC=2;AF=1.00;AN=2;DP=422;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.44;SOR=0.873 GT:AD:DP:GQ:PL 1/1:0,421:421:99:13687,1263,0 chr1 44759902 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 44760412 . G A 16534.77 PASS AC=2;AF=1.00;AN=2;DP=502;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.07;SOR=1.013 GT:AD:DP:GQ:PL 1/1:0,500:500:99:16563,1501,0 chr1 44764870 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 44771447 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 44775441 . T C 4142.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.88;SOR=2.282 GT:AD:DP:GQ:PL 1/1:0,117:117:99:4171,352,0 chr1 44778181 . G A 5377.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.286;ClippingRankSum=0.000;DP=397;ExcessHet=3.0103;FS=2.134;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.55;ReadPosRankSum=0.324;SOR=0.802 GT:AD:DP:GQ:PL 0/1:190,207:397:99:5406,0,4663 chr1 44779020 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.24;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 44793623 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 44801160 . A G 1630.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.165;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=6.921;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=0.501;SOR=1.468 GT:AD:DP:GQ:PL 0/1:66,54:120:99:1659,0,1814 chr1 44802684 . C A 158.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.231;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.34;ReadPosRankSum=0.062;SOR=0.293 GT:AD:DP:GQ:PL 0/1:11,6:17:99:187,0,408 chr1 44804352 . G C 5434.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.503;ClippingRankSum=0.000;DP=402;ExcessHet=3.0103;FS=2.431;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.52;ReadPosRankSum=-1.995;SOR=0.537 GT:AD:DP:GQ:PL 0/1:206,196:402:99:5463,0,5741 chr1 44805425 . G A 4128.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.075;ClippingRankSum=0.000;DP=282;ExcessHet=3.0103;FS=4.828;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.64;ReadPosRankSum=1.844;SOR=0.477 GT:AD:DP:GQ:PL 0/1:135,147:282:99:4157,0,3766 chr1 44806240 . G A 2598.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.563;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=1.878;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.19;ReadPosRankSum=0.063;SOR=0.843 GT:AD:DP:GQ:PL 0/1:100,97:197:99:2627,0,2841 chr1 44809879 . A C 355.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.10;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:384,30,0 chr1 44812422 . T C 659.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.207;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.45;ReadPosRankSum=-0.631;SOR=0.804 GT:AD:DP:GQ:PL 0/1:27,26:53:99:688,0,798 chr1 44814044 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 44823704 . T C 293.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.80;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:322,24,0 chr1 44823737 . C G 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 44826004 . C A 135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.230;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.34;ReadPosRankSum=-0.723;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:164,0,186 chr1 44826236 . G A 4604.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.070;ClippingRankSum=0.000;DP=393;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.72;ReadPosRankSum=-0.733;SOR=0.710 GT:AD:DP:GQ:PL 0/1:214,179:393:99:4633,0,5802 chr1 44826811 . C T 2183.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.886;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=1.774;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.14;ReadPosRankSum=-0.224;SOR=0.570 GT:AD:DP:GQ:PL 0/1:112,84:196:99:2212,0,3431 chr1 44827385 . G A 1581.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.092;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.12;ReadPosRankSum=-1.708;SOR=0.743 GT:AD:DP:GQ:PL 0/1:59,53:112:99:1610,0,1685 chr1 44827846 . A G 10808.77 PASS AC=2;AF=1.00;AN=2;DP=313;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.53;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,313:313:99:10837,939,0 chr1 44828080 . T C 2668.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.058;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=5.254;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.43;ReadPosRankSum=0.526;SOR=0.421 GT:AD:DP:GQ:PL 0/1:93,92:185:99:2697,0,2694 chr1 44828484 . T C 6950.77 PASS AC=2;AF=1.00;AN=2;DP=220;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.74;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,219:219:99:6979,657,0 chr1 44831080 . C T 223.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.127;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=1.987;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.72;ReadPosRankSum=-0.366;SOR=0.301 GT:AD:DP:GQ:PL 0/1:20,9:29:99:252,0,668 chr1 44832081 . A G 7741.77 PASS AC=2;AF=1.00;AN=2;DP=236;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.80;SOR=1.000 GT:AD:DP:GQ:PL 1/1:0,236:236:99:7770,708,0 chr1 44841834 . G A 3409.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.368;ClippingRankSum=0.000;DP=292;ExcessHet=3.0103;FS=8.104;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.76;ReadPosRankSum=0.017;SOR=1.103 GT:AD:DP:GQ:PL 0/1:161,129:290:99:3438,0,4302 chr1 44842737 . G A 3817.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.04;SOR=1.708 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3846,368,0 chr1 44845556 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 44874610 . C T 2392.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.23;SOR=2.239 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2421,216,0 chr1 44875031 . T C 138.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:166,12,0 chr1 44875607 . C T 1509.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.496;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=0.646;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.27;ReadPosRankSum=1.504;SOR=0.596 GT:AD:DP:GQ:PL 0/1:69,65:134:99:1538,0,1627 chr1 44897320 . T C 1745.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.63;SOR=1.823 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1774,171,0 chr1 44897578 . G A 575.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.516;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=2.325;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.28;ReadPosRankSum=1.175;SOR=0.425 GT:AD:DP:GQ:PL 0/1:31,25:56:99:604,0,812 chr1 44897628 . G C 413.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.322;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=2.054;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.55;ReadPosRankSum=0.621;SOR=1.550 GT:AD:DP:GQ:PL 0/1:11,14:25:99:442,0,282 chr1 44958709 . A G 477.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.106;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.828;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.11;ReadPosRankSum=1.333;SOR=1.061 GT:AD:DP:GQ:PL 0/1:7,18:25:99:506,0,149 chr1 44958837 . G C 387.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.356;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=4.129;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.63;ReadPosRankSum=0.783;SOR=1.765 GT:AD:DP:GQ:PL 0/1:8,14:22:99:416,0,200 chr1 44962467 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 44962471 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 44978094 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 44978222 . T C 414.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.139;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=3.067;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.85;ReadPosRankSum=0.879;SOR=0.148 GT:AD:DP:GQ:PL 0/1:9,13:22:99:443,0,310 chr1 44978366 . G A 1054.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.647;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.72;ReadPosRankSum=0.448;SOR=0.700 GT:AD:DP:GQ:PL 0/1:47,43:90:99:1083,0,1080 chr1 44981338 . T C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.524;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 44985096 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 44985101 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 44988221 . A C 162.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.850;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.14;ReadPosRankSum=-1.042;SOR=0.627 GT:AD:DP:GQ:PL 0/1:12,8:20:99:191,0,366 chr1 44991714 . A G 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=1.368;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:92:146,0,92 chr1 44992009 . G A 733.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.416;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=18.933;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.29;ReadPosRankSum=-0.672;SOR=2.006 GT:AD:DP:GQ:PL 0/1:38,27:65:99:762,0,1119 chr1 44992036 . G A 533.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.461;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=14.963;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.61;ReadPosRankSum=0.206;SOR=2.285 GT:AD:DP:GQ:PL 0/1:40,22:62:99:562,0,1075 chr1 44992201 . G A 438.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.59;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:467,36,0 chr1 45001944 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 45004458 . T C 3389.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.66;SOR=3.109 GT:AD:DP:GQ:PL 1/1:0,88:88:99:3418,264,0 chr1 45005690 . G A 342.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.85;ReadPosRankSum=0.517;SOR=1.473 GT:AD:DP:GQ:PL 0/1:5,10:15:99:371,0,160 chr1 45006497 . C T 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=0.566;SOR=1.981 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,109 chr1 45007644 . C T 484.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.336;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=2.993;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.08;ReadPosRankSum=0.410;SOR=0.172 GT:AD:DP:GQ:PL 0/1:9,14:23:99:513,0,269 chr1 45008336 . T C 2317.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.147;ClippingRankSum=0.000;DP=183;ExcessHet=3.0103;FS=0.548;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.67;ReadPosRankSum=-0.288;SOR=0.615 GT:AD:DP:GQ:PL 0/1:97,86:183:99:2346,0,2603 chr1 45008485 . G A 3131.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.569;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=1.704;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=0.712;SOR=0.843 GT:AD:DP:GQ:PL 0/1:117,116:233:99:3160,0,3434 chr1 45009078 . A T 1447.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.026;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=2.282;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.91;ReadPosRankSum=-0.954;SOR=1.074 GT:AD:DP:GQ:PL 0/1:52,39:91:99:1476,0,3305 chr1 45009083 . C G 1534.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.780;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=2.120;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.66;ReadPosRankSum=-0.017;SOR=0.990 GT:AD:DP:GQ:PL 0/1:56,42:98:99:1563,0,3358 chr1 45009894 . A G 3625.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.23;SOR=2.350 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3654,301,0 chr1 45010397 . C A 1135.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.19;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1164,96,0 chr1 45010817 . A G 1003.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.794;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=2.886;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.67;ReadPosRankSum=-0.681;SOR=0.430 GT:AD:DP:GQ:PL 0/1:50,36:86:99:1032,0,1604 chr1 45010991 . G A 1627.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.738;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=2.360;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.68;ReadPosRankSum=1.134;SOR=0.956 GT:AD:DP:GQ:PL 0/1:60,59:119:99:1656,0,1776 chr1 45012761 . C T 605.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.977;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=3.358;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.53;ReadPosRankSum=-0.616;SOR=0.155 GT:AD:DP:GQ:PL 0/1:21,18:39:99:634,0,748 chr1 45014100 . G T 3086.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.166;ClippingRankSum=0.000;DP=293;ExcessHet=3.0103;FS=0.925;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.57;ReadPosRankSum=-1.418;SOR=0.618 GT:AD:DP:GQ:PL 0/1:175,117:292:99:3115,0,5213 chr1 45014202 . G T 5336.77 PASS AC=2;AF=1.00;AN=2;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.17;SOR=1.721 GT:AD:DP:GQ:PL 1/1:0,152:152:99:5365,457,0 chr1 45015061 . C T 997.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.68;SOR=1.528 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1026,81,0 chr1 45015157 . T C 364.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.209;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=1.740;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.58;ReadPosRankSum=0.098;SOR=1.192 GT:AD:DP:GQ:PL 0/1:11,11:22:99:393,0,325 chr1 45015879 . A G 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 45015885 . A C 59.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.64;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:87,6,0 chr1 45015886 . A C 59.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.82;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:87,6,0 chr1 45020600 . T C 395.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.114;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=2.341;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.13;ReadPosRankSum=-0.276;SOR=0.250 GT:AD:DP:GQ:PL 0/1:15,13:28:99:424,0,507 chr1 45034134 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 45034622 . A G 1210.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.342;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=25.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.53;ReadPosRankSum=-0.786;SOR=3.891 GT:AD:DP:GQ:PL 0/1:27,35:62:99:1239,0,671 chr1 45039048 . G C 970.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.488;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=4.940;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.16;ReadPosRankSum=0.597;SOR=0.345 GT:AD:DP:GQ:PL 0/1:61,45:106:99:999,0,1715 chr1 45044040 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 45058541 . C T 4398.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.45;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,124:124:99:4427,373,0 chr1 45070332 . A G 1830.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.53;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1859,186,0 chr1 45088428 . A G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 45162677 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 45316406 . C T 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=0.000;SOR=0.707 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,140 chr1 45330597 . G C 5136.77 PASS AC=2;AF=1.00;AN=2;DP=157;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.93;SOR=2.043 GT:AD:DP:GQ:PL 1/1:0,156:156:99:5165,468,0 chr1 45330682 . G T 270.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.169;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.67;ReadPosRankSum=0.851;SOR=0.941 GT:AD:DP:GQ:PL 0/1:18,10:28:99:299,0,599 chr1 45331833 . C G 1208.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.538;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.92;ReadPosRankSum=1.438;SOR=0.680 GT:AD:DP:GQ:PL 0/1:39,42:81:99:1237,0,1237 chr1 45332883 . T C 11072.77 PASS AC=2;AF=1.00;AN=2;DP=332;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.35;SOR=0.978 GT:AD:DP:GQ:PL 1/1:0,332:332:99:11101,995,0 chr1 45338378 . C T 771.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.237;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=1.115;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.52;ReadPosRankSum=0.723;SOR=0.990 GT:AD:DP:GQ:PL 0/1:38,29:67:99:800,0,1116 chr1 45339894 . G C 4064.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.05;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,123:123:99:4093,369,0 chr1 45340760 . C T 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.54;ReadPosRankSum=-0.712;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:179,0,62 chr1 45345623 . C A 2100.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.428;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=0.533;SOR=0.640 GT:AD:DP:GQ:PL 0/1:78,68:146:99:2129,0,2449 chr1 45347362 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 45347769 . T C 3362.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.81;SOR=1.130 GT:AD:DP:GQ:PL 1/1:0,91:91:99:3391,274,0 chr1 45348045 . G A 2799.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.075;ClippingRankSum=0.000;DP=226;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.39;ReadPosRankSum=-0.426;SOR=0.718 GT:AD:DP:GQ:PL 0/1:118,108:226:99:2828,0,3129 chr1 45348148 . G A 2806.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.21;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2835,234,0 chr1 45348269 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.30;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 45355246 . T C 1528.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.837;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=2.874;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.14;ReadPosRankSum=-1.323;SOR=1.060 GT:AD:DP:GQ:PL 0/1:48,53:101:99:1557,0,1312 chr1 45397571 . T G 30.81 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.41;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,1:2:20:59,0,20 chr1 45399023 . C A 246.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.03;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:275,21,0 chr1 45399089 . C T 158.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.46;ReadPosRankSum=-0.967;SOR=1.872 GT:AD:DP:GQ:PL 0/1:1,5:6:24:187,0,24 chr1 45414997 . C T 957.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.285;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.94;ReadPosRankSum=0.176;SOR=0.619 GT:AD:DP:GQ:PL 0/1:35,39:74:99:986,0,838 chr1 45421616 . T C 432.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.716;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.02;ReadPosRankSum=-1.215;SOR=0.484 GT:AD:DP:GQ:PL 0/1:20,16:36:99:461,0,645 chr1 45433442 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr1 45495073 . G T 1996.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.754;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=3.935;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.68;ReadPosRankSum=0.354;SOR=0.447 GT:AD:DP:GQ:PL 0/1:65,81:146:99:2025,0,1690 chr1 45496283 . A G 2610.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.81;SOR=2.599 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2639,225,0 chr1 45496737 . T C 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=-0.032;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:173,0,256 chr1 45497311 . G A 1514.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.687;ClippingRankSum=0.000;DP=183;ExcessHet=3.0103;FS=0.551;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.32;ReadPosRankSum=0.814;SOR=0.748 GT:AD:DP:GQ:PL 0/1:107,75:182:99:1543,0,2703 chr1 45497577 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 45499668 . T C 7179.77 PASS AC=2;AF=1.00;AN=2;DP=199;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.29;SOR=2.220 GT:AD:DP:GQ:PL 1/1:0,199:199:99:7208,598,0 chr1 45500031 . G T 353.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.60;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:382,27,0 chr1 45500626 . A G 351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.774;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.45;ReadPosRankSum=0.814;SOR=0.793 GT:AD:DP:GQ:PL 0/1:4,11:15:99:380,0,118 chr1 45507135 . C T 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.191;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=2.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.83;ReadPosRankSum=-0.169;SOR=0.204 GT:AD:DP:GQ:PL 0/1:7,6:13:99:143,0,219 chr1 45507956 . T C 150.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.210;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.13;ReadPosRankSum=-0.210;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:179,0,24 chr1 45508022 . C T 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.18;ReadPosRankSum=-0.736;SOR=1.112 GT:AD:DP:GQ:PL 0/1:6,9:15:99:331,0,193 chr1 45508729 . A G 855.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.365;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.78;ReadPosRankSum=-0.132;SOR=0.733 GT:AD:DP:GQ:PL 0/1:25,26:51:99:884,0,853 chr1 45509494 . A G 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:63,0,33 chr1 45515190 . T G 143.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.98;ReadPosRankSum=-0.754;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:172,0,256 chr1 45515267 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 45515840 . T C 3713.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.63;QD=36.33;SOR=1.449 GT:AD:DP:GQ:PL 1/1:0,99:99:99:3742,297,0 chr1 45518681 . G A 382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.92;ReadPosRankSum=-0.522;SOR=1.609 GT:AD:DP:GQ:PL 0/1:5,11:16:99:411,0,157 chr1 45528294 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.04;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 45531929 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 45540633 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 45549333 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 45549485 . A G 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr1 45558809 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 45561683 . T C 1292.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.261;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.33;ReadPosRankSum=2.227;SOR=0.618 GT:AD:DP:GQ:PL 0/1:50,47:97:99:1321,0,1411 chr1 45565767 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 45567244 . C G 1311.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.117;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=3.129;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-1.686;SOR=0.297 GT:AD:DP:GQ:PL 0/1:37,41:78:99:1340,0,1188 chr1 45584779 . C G 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=0.792;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,118 chr1 45600326 . T C 1293.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.92;QD=33.17;SOR=1.096 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1322,117,0 chr1 45607817 . G A 3234.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.809;ClippingRankSum=0.000;DP=268;ExcessHet=3.0103;FS=0.446;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.07;ReadPosRankSum=-0.734;SOR=0.742 GT:AD:DP:GQ:PL 0/1:146,122:268:99:3263,0,3977 chr1 45612958 . A G 170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.437;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.05;ReadPosRankSum=0.177;SOR=0.963 GT:AD:DP:GQ:PL 0/1:11,6:17:99:199,0,362 chr1 45613182 . A G 679.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.335;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=2.130;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.79;ReadPosRankSum=-1.324;SOR=1.005 GT:AD:DP:GQ:PL 0/1:35,28:63:99:708,0,1034 chr1 45613212 . C T 507.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.696;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=6.129;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.40;ReadPosRankSum=0.000;SOR=1.714 GT:AD:DP:GQ:PL 0/1:34,20:54:99:536,0,986 chr1 45614628 . A T 266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.52;ReadPosRankSum=-0.494;SOR=1.179 GT:AD:DP:GQ:PL 0/1:5,8:13:99:295,0,170 chr1 45615275 . A C 1134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.323;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.759;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.35;ReadPosRankSum=0.860;SOR=0.582 GT:AD:DP:GQ:PL 0/1:53,47:100:99:1163,0,1396 chr1 45616268 . T A 3858.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.63;SOR=0.795 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3887,365,0 chr1 45616288 . C T 1591.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.349;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=1.082;SOR=0.648 GT:AD:DP:GQ:PL 0/1:64,60:124:99:1620,0,1721 chr1 45616759 . C A 1271.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.937;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.56;ReadPosRankSum=-0.446;SOR=0.634 GT:AD:DP:GQ:PL 0/1:56,54:110:99:1300,0,1452 chr1 45620180 . C T 459.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.559;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.58;ReadPosRankSum=-0.248;SOR=0.368 GT:AD:DP:GQ:PL 0/1:32,16:48:99:488,0,1084 chr1 45620207 . C G 735.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.154;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=2.419;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.08;ReadPosRankSum=-1.527;SOR=1.148 GT:AD:DP:GQ:PL 0/1:47,26:73:99:764,0,1348 chr1 45620405 . C T 3878.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.685;ClippingRankSum=0.000;DP=245;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.83;ReadPosRankSum=0.582;SOR=0.666 GT:AD:DP:GQ:PL 0/1:105,140:245:99:3907,0,2667 chr1 45620657 . C T 2320.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.156;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=4.249;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.84;ReadPosRankSum=-0.918;SOR=1.007 GT:AD:DP:GQ:PL 0/1:108,88:196:99:2349,0,3188 chr1 45621241 . C T 1254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.767;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.793;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.64;ReadPosRankSum=0.104;SOR=0.842 GT:AD:DP:GQ:PL 0/1:51,41:92:99:1283,0,1526 chr1 45621905 . G A 2945.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.827;ClippingRankSum=0.000;DP=202;ExcessHet=3.0103;FS=3.169;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=-1.468;SOR=0.505 GT:AD:DP:GQ:PL 0/1:95,107:202:99:2974,0,2681 chr1 45622207 . A G 3788.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.806;ClippingRankSum=0.000;DP=254;ExcessHet=3.0103;FS=4.252;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.98;ReadPosRankSum=-0.626;SOR=0.493 GT:AD:DP:GQ:PL 0/1:116,137:253:99:3817,0,3320 chr1 45623553 . C G 2410.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.271;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=1.928;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.52;ReadPosRankSum=-0.033;SOR=0.753 GT:AD:DP:GQ:PL 0/1:81,85:166:99:2439,0,2252 chr1 45628355 . A G 2097.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.493;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=2.998;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=0.998;SOR=0.467 GT:AD:DP:GQ:PL 0/1:72,78:150:99:2126,0,1977 chr1 45628564 . A G 436.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.91;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:465,36,0 chr1 45629471 . C A 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.81;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 45629600 . T C 1866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.214;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=0.638;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.45;ReadPosRankSum=0.489;SOR=0.795 GT:AD:DP:GQ:PL 0/1:74,76:150:99:1895,0,1791 chr1 45630304 . G A 682.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.262;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.07;ReadPosRankSum=0.671;SOR=0.400 GT:AD:DP:GQ:PL 0/1:19,21:40:99:711,0,604 chr1 45630816 . A G 460.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.090;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=1.830;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.96;ReadPosRankSum=0.180;SOR=0.358 GT:AD:DP:GQ:PL 0/1:17,16:33:99:489,0,531 chr1 45642196 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 45653701 . T C 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr1 45658855 . C T 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.75;ReadPosRankSum=-0.812;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:98:224,0,98 chr1 45658886 . A G 700.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.67;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:729,51,0 chr1 45658899 . A C 278.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.507;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=0.452;SOR=1.112 GT:AD:DP:GQ:PL 0/1:14,9:23:99:307,0,468 chr1 45658991 . A G 4237.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.18;SOR=2.265 GT:AD:DP:GQ:PL 1/1:0,124:124:99:4266,372,0 chr1 45694588 . C T 453.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.212;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=4.547;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.08;ReadPosRankSum=-1.158;SOR=1.501 GT:AD:DP:GQ:PL 0/1:33,17:50:99:482,0,907 chr1 45697584 . A G 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 45701189 . G C 104.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.718;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.23;ReadPosRankSum=0.921;SOR=0.638 GT:AD:DP:GQ:PL 0/1:36,11:47:99:133,0,913 chr1 45729703 . T C 1413.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.076;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=3.296;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.78;ReadPosRankSum=-1.434;SOR=0.998 GT:AD:DP:GQ:PL 0/1:61,59:120:99:1442,0,1495 chr1 45731710 . T C 61.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:89,9,0 chr1 45740868 . A G 571.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.037;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.99;ReadPosRankSum=-0.515;SOR=0.877 GT:AD:DP:GQ:PL 0/1:9,17:26:99:600,0,264 chr1 45746328 . A G 4262.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.126;ClippingRankSum=0.000;DP=315;ExcessHet=3.0103;FS=11.448;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.58;ReadPosRankSum=1.793;SOR=0.678 GT:AD:DP:GQ:PL 0/1:149,165:314:99:4291,0,3771 chr1 45750903 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 45753600 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 45753601 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 45753614 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 45753627 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 45753633 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 45753645 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 45777683 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 45781786 . T A 169.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.22;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:24:198,24,0 chr1 45786006 . C T 112.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:140,12,0 chr1 45797611 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 45818312 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 45822680 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 45829774 . A T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:56:110,0,56 chr1 45860057 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 45872772 . C T 100.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.18;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:129,15,0 chr1 45882141 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 45882204 . A T 1006.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.16;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,21:21:69:1035,69,0 chr1 45882207 . T A 1006.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.39;SOR=4.003 GT:AD:DP:GQ:PL 1/1:0,23:23:69:1035,69,0 chr1 45882238 . G A 1699.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.34;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1728,120,0 chr1 45882557 . C G 1209.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.70;SOR=2.012 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1238,111,0 chr1 45904591 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 45913846 . A G 6959.77 PASS AC=2;AF=1.00;AN=2;DP=220;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.64;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,220:220:99:6988,660,0 chr1 45917180 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 45931899 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 45940921 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.66;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 45940922 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.05;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 45959252 . G C 435.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.940;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=3.041;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.82;ReadPosRankSum=0.395;SOR=1.302 GT:AD:DP:GQ:PL 0/1:18,16:34:99:464,0,581 chr1 45959292 . G A 1474.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=1.900 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1503,126,0 chr1 45995094 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 45995116 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 46006481 . G A 1630.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.36;SOR=7.428 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1659,120,0 chr1 46008130 . A G 323.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.862;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.91;ReadPosRankSum=1.085;SOR=0.804 GT:AD:DP:GQ:PL 0/1:2,11:13:44:352,0,44 chr1 46008230 . A T 640.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.529;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=5.876;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.42;ReadPosRankSum=0.614;SOR=0.162 GT:AD:DP:GQ:PL 0/1:11,22:33:99:669,0,300 chr1 46010915 . T G 5475.77 PASS AC=2;AF=1.00;AN=2;DP=169;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.40;SOR=1.487 GT:AD:DP:GQ:PL 1/1:0,169:169:99:5504,506,0 chr1 46011172 . A G 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 46011654 . G C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 46021496 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 46023525 . T C 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.11;ReadPosRankSum=-0.180;SOR=0.223 GT:AD:DP:GQ:PL 0/1:3,4:7:99:134,0,104 chr1 46029737 . A G 1859.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.647;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.76;ReadPosRankSum=0.613;SOR=0.697 GT:AD:DP:GQ:PL 0/1:66,60:126:99:1888,0,2036 chr1 46029762 . G A 1893.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.016;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.71;ReadPosRankSum=-0.021;SOR=0.654 GT:AD:DP:GQ:PL 0/1:83,66:149:99:1922,0,2543 chr1 46032703 . A G 2358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.623;ClippingRankSum=0.000;DP=188;ExcessHet=3.0103;FS=0.548;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.55;ReadPosRankSum=-0.469;SOR=0.610 GT:AD:DP:GQ:PL 0/1:94,94:188:99:2387,0,2436 chr1 46036022 . C T 2733.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.222;ClippingRankSum=0.000;DP=222;ExcessHet=3.0103;FS=2.617;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.31;ReadPosRankSum=-1.499;SOR=0.920 GT:AD:DP:GQ:PL 0/1:124,98:222:99:2762,0,3654 chr1 46055887 . A T 701.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.055;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.12;ReadPosRankSum=-1.110;SOR=0.760 GT:AD:DP:GQ:PL 0/1:12,29:41:99:730,0,332 chr1 46073850 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 46132065 . C T 327.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.054;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=2.199;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=-0.160;SOR=0.275 GT:AD:DP:GQ:PL 0/1:8,11:19:99:356,0,243 chr1 46132581 . G A 1526.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.922;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.825;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.60;ReadPosRankSum=1.228;SOR=0.801 GT:AD:DP:GQ:PL 0/1:32,60:92:99:1555,0,814 chr1 46162040 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 46170712 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 46176155 . A G 1622.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.191;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=1.121;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.08;ReadPosRankSum=-3.349;SOR=0.995 GT:AD:DP:GQ:PL 0/1:42,53:95:99:1651,0,1264 chr1 46185410 . C G 1077.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.823;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=-1.021;SOR=0.643 GT:AD:DP:GQ:PL 0/1:53,40:93:99:1106,0,1673 chr1 46185947 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 46189428 . T C 3207.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.030;ClippingRankSum=0.000;DP=211;ExcessHet=3.0103;FS=3.116;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.20;ReadPosRankSum=0.922;SOR=0.927 GT:AD:DP:GQ:PL 0/1:97,114:211:99:3236,0,2663 chr1 46189486 . T C 8084.77 PASS AC=2;AF=1.00;AN=2;DP=248;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=0.983 GT:AD:DP:GQ:PL 1/1:0,248:248:99:8113,744,0 chr1 46189823 . G T 1315.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.056;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=0.741;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.75;ReadPosRankSum=0.418;SOR=0.811 GT:AD:DP:GQ:PL 0/1:61,51:112:99:1344,0,1708 chr1 46191883 . A C 313.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:342,27,0 chr1 46191979 . T C 2681.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.85;SOR=6.154 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2710,199,0 chr1 46192656 . A G 8686.77 PASS AC=2;AF=1.00;AN=2;DP=200;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.00;SOR=1.657 GT:AD:DP:GQ:PL 1/1:0,200:200:99:8715,601,0 chr1 46192671 . G A 7957.77 PASS AC=2;AF=1.00;AN=2;DP=175;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.31;SOR=1.530 GT:AD:DP:GQ:PL 1/1:0,175:175:99:7986,542,0 chr1 46193432 . T C 6281.77 PASS AC=2;AF=1.00;AN=2;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.23;SOR=2.052 GT:AD:DP:GQ:PL 1/1:0,171:171:99:6310,513,0 chr1 46193691 . T C 8847.77 PASS AC=2;AF=1.00;AN=2;DP=261;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.16;SOR=1.279 GT:AD:DP:GQ:PL 1/1:0,259:259:99:8876,777,0 chr1 46194623 . T C 10089.77 PASS AC=2;AF=1.00;AN=2;DP=336;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.12;SOR=1.141 GT:AD:DP:GQ:PL 1/1:0,335:335:99:10118,1004,0 chr1 46196104 . G A 1400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.109;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=1.339;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.06;ReadPosRankSum=-0.597;SOR=0.455 GT:AD:DP:GQ:PL 0/1:48,45:93:99:1429,0,1541 chr1 46196937 . A C 4207.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.740;ClippingRankSum=0.000;DP=332;ExcessHet=3.0103;FS=4.939;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.71;ReadPosRankSum=1.451;SOR=0.945 GT:AD:DP:GQ:PL 0/1:174,157:331:99:4236,0,4649 chr1 46200814 . C T 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr1 46259725 . G A 43.79 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.95;ReadPosRankSum=-1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:23:72,0,23 chr1 46303720 . A G 2051.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.696;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=0.673;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.86;ReadPosRankSum=0.131;SOR=0.815 GT:AD:DP:GQ:PL 0/1:76,72:148:99:2080,0,2104 chr1 46316464 . G T 1726.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.448;ClippingRankSum=0.000;DP=199;ExcessHet=3.0103;FS=2.480;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.68;ReadPosRankSum=0.248;SOR=0.525 GT:AD:DP:GQ:PL 0/1:117,82:199:99:1755,0,2910 chr1 46316520 . A G 1595.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.354;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=0.614;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.04;ReadPosRankSum=1.843;SOR=0.772 GT:AD:DP:GQ:PL 0/1:90,69:159:99:1624,0,2338 chr1 46344731 . G A 1759.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.611;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=11.587;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.76;ReadPosRankSum=-0.287;SOR=0.170 GT:AD:DP:GQ:PL 0/1:39,66:105:99:1788,0,1034 chr1 46348176 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 46353057 . T C 3909.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.585;ClippingRankSum=0.000;DP=291;ExcessHet=3.0103;FS=4.935;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=1.167;SOR=1.002 GT:AD:DP:GQ:PL 0/1:147,144:291:99:3938,0,3944 chr1 46361542 . A C 1665.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.06;SOR=3.306 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1694,140,0 chr1 46386389 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 46398819 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 46398839 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 46398856 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 46405089 . C A 4018.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.109;ClippingRankSum=0.000;DP=303;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=-0.897;SOR=0.679 GT:AD:DP:GQ:PL 0/1:148,155:303:99:4047,0,3696 chr1 46406314 . T C 10143.77 PASS AC=2;AF=1.00;AN=2;DP=324;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.40;SOR=0.948 GT:AD:DP:GQ:PL 1/1:0,323:323:99:10172,968,0 chr1 46408607 . G A 1178.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.290;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.92;ReadPosRankSum=0.920;SOR=0.632 GT:AD:DP:GQ:PL 0/1:34,45:79:99:1207,0,843 chr1 46408711 . A G 287.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.387;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=-1.212;SOR=1.460 GT:AD:DP:GQ:PL 0/1:11,9:20:99:316,0,365 chr1 46415681 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 46431089 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 46432391 . C A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 46467512 . C T 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.126;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 46484319 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 46496685 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 46511165 . C T 3278.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.757;ClippingRankSum=0.000;DP=302;ExcessHet=3.0103;FS=1.962;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.89;ReadPosRankSum=0.949;SOR=0.566 GT:AD:DP:GQ:PL 0/1:171,130:301:99:3307,0,4772 chr1 46514226 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 46515864 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 46524120 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 46525030 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 46525193 . A G 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr1 46534086 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 46534104 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 46547639 . C T 5977.77 PASS AC=2;AF=1.00;AN=2;DP=178;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.58;SOR=1.819 GT:AD:DP:GQ:PL 1/1:0,178:178:99:6006,535,0 chr1 46547692 . T C 3719.77 PASS AC=2;AF=1.00;AN=2;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.08;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,106:106:99:3748,318,0 chr1 46549401 . A C 832.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.39;SOR=4.712 GT:AD:DP:GQ:PL 1/1:0,21:21:63:861,63,0 chr1 46549588 . T C 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr1 46550840 . G A 155.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.97;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:184,18,0 chr1 46568177 . T C 238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.660;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.71;ReadPosRankSum=-0.349;SOR=2.093 GT:AD:DP:GQ:PL 0/1:3,8:11:92:267,0,92 chr1 46576940 . C T 309.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.81;ReadPosRankSum=-0.017;SOR=0.818 GT:AD:DP:GQ:PL 0/1:3,9:12:89:338,0,89 chr1 46582807 . T C 1379.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.598;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=3.770;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.43;ReadPosRankSum=-0.978;SOR=1.079 GT:AD:DP:GQ:PL 0/1:60,51:111:99:1408,0,1554 chr1 46628395 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 46633563 . A C 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=-0.480;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,224 chr1 46633674 . C A 617.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.071;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.217;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.87;ReadPosRankSum=1.094;SOR=0.976 GT:AD:DP:GQ:PL 0/1:25,23:48:99:646,0,718 chr1 46634049 . T C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 46636386 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 46643156 . T C 578.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.648;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=1.464;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.78;ReadPosRankSum=1.384;SOR=0.400 GT:AD:DP:GQ:PL 0/1:22,20:42:99:607,0,644 chr1 46643417 . A G 414.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.668;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=3.203;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.12;ReadPosRankSum=0.177;SOR=1.402 GT:AD:DP:GQ:PL 0/1:25,16:41:99:443,0,716 chr1 46644996 . G C 557.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.763;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=4.709;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=-0.568;SOR=1.552 GT:AD:DP:GQ:PL 0/1:38,20:58:99:586,0,1023 chr1 46645040 . C T 1248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.533;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.36;ReadPosRankSum=-0.887;SOR=0.641 GT:AD:DP:GQ:PL 0/1:55,46:101:99:1277,0,1636 chr1 46652272 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:59:72,0,59 chr1 46652395 . G A 394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=3.358;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.18;ReadPosRankSum=1.065;SOR=0.148 GT:AD:DP:GQ:PL 0/1:14,12:26:99:423,0,504 chr1 46652517 . G T 1315.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.093;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=0.691;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.61;ReadPosRankSum=-0.548;SOR=0.822 GT:AD:DP:GQ:PL 0/1:71,53:124:99:1344,0,1948 chr1 46653676 . C T 823.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.523;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.997;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.30;ReadPosRankSum=0.575;SOR=0.923 GT:AD:DP:GQ:PL 0/1:37,30:67:99:852,0,1060 chr1 46657891 . C G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.000;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 46657927 . C A 135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.44;ReadPosRankSum=-0.083;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,5:13:99:164,0,295 chr1 46658807 . A G 243.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.589;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.03;ReadPosRankSum=-1.382;SOR=0.818 GT:AD:DP:GQ:PL 0/1:16,11:27:99:272,0,417 chr1 46658882 . T A 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.328;SOR=0.086 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,136 chr1 46665201 . A G 880.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.385;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.23;ReadPosRankSum=0.894;SOR=0.596 GT:AD:DP:GQ:PL 0/1:39,33:72:99:909,0,1147 chr1 46665576 . G A 1718.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.900;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=4.398;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.86;ReadPosRankSum=0.407;SOR=1.109 GT:AD:DP:GQ:PL 0/1:59,65:124:99:1747,0,1634 chr1 46665647 . A T 1659.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.150;ClippingRankSum=0.000;DP=154;ExcessHet=3.0103;FS=2.020;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.78;ReadPosRankSum=-1.557;SOR=0.886 GT:AD:DP:GQ:PL 0/1:83,71:154:99:1688,0,2027 chr1 46668139 . T C 1524.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.70;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1553,126,0 chr1 46671641 . T G 911.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.735;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=4.504;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.20;ReadPosRankSum=0.608;SOR=1.479 GT:AD:DP:GQ:PL 0/1:29,31:60:99:940,0,818 chr1 46671678 . T C 1184.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.414;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=7.207;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.47;ReadPosRankSum=0.241;SOR=0.271 GT:AD:DP:GQ:PL 0/1:51,44:95:99:1213,0,1392 chr1 46672772 . C T 2956.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.44;SOR=4.671 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2985,232,0 chr1 46673147 . T G 7732.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.005;ClippingRankSum=0.000;DP=624;ExcessHet=3.0103;FS=1.116;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.41;ReadPosRankSum=-0.509;SOR=0.824 GT:AD:DP:GQ:PL 0/1:330,293:623:99:7761,0,9008 chr1 46678411 . T C 470.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.038;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=1.675;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.72;ReadPosRankSum=0.444;SOR=0.327 GT:AD:DP:GQ:PL 0/1:20,17:37:99:499,0,613 chr1 46678812 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 46684367 . C T 152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.97;ReadPosRankSum=-2.057;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,5:9:99:181,0,106 chr1 46686958 . C A 364.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.415;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.26;ReadPosRankSum=-0.928;SOR=1.179 GT:AD:DP:GQ:PL 0/1:7,11:18:99:393,0,226 chr1 46688183 . T A 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-0.751;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr1 46689426 . G A 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.29;ReadPosRankSum=1.191;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,7:13:99:253,0,211 chr1 46689790 . G A 281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.273;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.81;ReadPosRankSum=0.553;SOR=0.392 GT:AD:DP:GQ:PL 0/1:13,9:22:99:310,0,442 chr1 46691634 . A C 99.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.67;ReadPosRankSum=0.930;SOR=0.223 GT:AD:DP:GQ:PL 0/1:9,4:13:99:128,0,330 chr1 46742610 . T C 608.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.740;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=3.854;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.64;ReadPosRankSum=-0.721;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,24:31:99:637,0,165 chr1 46745559 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 46745566 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 46798823 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 46805939 . T A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 46811056 . G C 2519.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.596;ClippingRankSum=0.000;DP=173;ExcessHet=3.0103;FS=19.671;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.57;ReadPosRankSum=-0.687;SOR=1.825 GT:AD:DP:GQ:PL 0/1:89,84:173:99:2548,0,2546 chr1 46811147 . G A 1319.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.974;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=0.685;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.39;ReadPosRankSum=0.200;SOR=0.804 GT:AD:DP:GQ:PL 0/1:78,49:127:99:1348,0,2159 chr1 46813167 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 46815187 . G A 2101.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.120;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=2.501;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.67;ReadPosRankSum=-1.752;SOR=0.886 GT:AD:DP:GQ:PL 0/1:117,80:197:99:2130,0,3034 chr1 46817100 . C T 3077.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.590;ClippingRankSum=0.000;DP=254;ExcessHet=3.0103;FS=2.746;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=0.257;SOR=0.867 GT:AD:DP:GQ:PL 0/1:129,125:254:99:3106,0,3296 chr1 46843384 . T C 866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.806;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=4.388;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.32;ReadPosRankSum=0.429;SOR=1.257 GT:AD:DP:GQ:PL 0/1:50,34:84:99:895,0,1359 chr1 46843593 . A G 292.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.239;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.30;ReadPosRankSum=2.567;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,10:16:99:321,0,184 chr1 46868164 . G C 460.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.057;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=4.821;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.89;ReadPosRankSum=-0.436;SOR=1.981 GT:AD:DP:GQ:PL 0/1:14,15:29:99:489,0,403 chr1 46873216 . C A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=1.282;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,81 chr1 46873441 . G T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.842;SOR=2.833 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 46882901 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 46885362 . T A 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.998;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.59;MQRankSum=-1.915;QD=9.06;ReadPosRankSum=-0.571;SOR=1.371 GT:AD:DP:GQ:PL 0/1:7,5:12:99:137,0,202 chr1 46885380 . A T 221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.645;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=45.40;MQRankSum=-1.811;QD=13.86;ReadPosRankSum=-0.860;SOR=1.802 GT:AD:DP:GQ:PL 0/1:8,8:16:99:250,0,210 chr1 46885476 . T C 676.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.683;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=1.121;MLEAC=1;MLEAF=0.500;MQ=45.54;MQRankSum=-4.072;QD=11.47;ReadPosRankSum=-0.977;SOR=1.025 GT:AD:DP:GQ:PL 0/1:36,23:59:99:705,0,902 chr1 46892649 . T A 351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.028;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.90;MQRankSum=-1.023;QD=11.35;ReadPosRankSum=0.875;SOR=0.693 GT:AD:DP:GQ:PL 0/1:13,18:31:99:380,0,250 chr1 46929841 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.73;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 46930301 . G A 1162.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.066;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.61;ReadPosRankSum=-0.043;SOR=0.705 GT:AD:DP:GQ:PL 0/1:29,41:70:99:1191,0,838 chr1 46930388 . C T 291.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.187;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.21;ReadPosRankSum=-0.458;SOR=1.781 GT:AD:DP:GQ:PL 0/1:9,9:18:99:320,0,288 chr1 46930490 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 46932556 . G A 451.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.651;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=2.737;MLEAC=1;MLEAF=0.500;MQ=49.72;MQRankSum=-0.421;QD=20.53;ReadPosRankSum=-0.086;SOR=0.223 GT:AD:DP:GQ:PL 0/1:6,16:22:99:480,0,185 chr1 46932824 . A G 6656.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.421;ClippingRankSum=0.000;DP=513;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.78;MQRankSum=-11.705;QD=12.98;ReadPosRankSum=0.763;SOR=0.702 GT:AD:DP:GQ:PL 0/1:258,255:513:99:6685,0,6570 chr1 46933071 . G C 2864.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.159;ClippingRankSum=0.000;DP=191;ExcessHet=3.0103;FS=3.409;MLEAC=1;MLEAF=0.500;MQ=59.98;MQRankSum=1.016;QD=15.00;ReadPosRankSum=0.257;SOR=0.956 GT:AD:DP:GQ:PL 0/1:95,96:191:99:2893,0,2877 chr1 46933241 . C T 621.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.787;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.94;ReadPosRankSum=-0.393;SOR=0.368 GT:AD:DP:GQ:PL 0/1:19,20:39:99:650,0,642 chr1 46933743 . C A 304.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.004;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.85;ReadPosRankSum=-0.296;SOR=0.138 GT:AD:DP:GQ:PL 0/1:12,10:22:99:333,0,435 chr1 46933825 . T C 1562.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.430;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=1.054;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.80;ReadPosRankSum=0.402;SOR=0.948 GT:AD:DP:GQ:PL 0/1:42,51:93:99:1591,0,1227 chr1 46934295 . G A 4946.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.268;ClippingRankSum=0.000;DP=344;ExcessHet=3.0103;FS=2.347;MLEAC=1;MLEAF=0.500;MQ=44.58;MQRankSum=-0.734;QD=14.46;ReadPosRankSum=-2.514;SOR=0.566 GT:AD:DP:GQ:PL 0/1:153,189:342:99:4975,0,3844 chr1 46935351 . T C 711.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.551;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.206;MLEAC=1;MLEAF=0.500;MQ=44.18;MQRankSum=1.614;QD=15.82;ReadPosRankSum=-0.052;SOR=0.479 GT:AD:DP:GQ:PL 0/1:23,22:45:99:740,0,753 chr1 46935752 . A T 2740.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.180;ClippingRankSum=0.000;DP=195;ExcessHet=3.0103;FS=4.689;MLEAC=1;MLEAF=0.500;MQ=54.01;MQRankSum=-7.771;QD=14.13;ReadPosRankSum=0.786;SOR=0.415 GT:AD:DP:GQ:PL 0/1:83,111:194:99:2769,0,2248 chr1 46935794 . T C 2015.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.534;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=3.739;MLEAC=1;MLEAF=0.500;MQ=57.99;MQRankSum=-3.322;QD=17.84;ReadPosRankSum=0.845;SOR=0.353 GT:AD:DP:GQ:PL 0/1:47,66:113:99:2044,0,1471 chr1 46952654 . A G 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.960;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.29;ReadPosRankSum=0.674;SOR=2.093 GT:AD:DP:GQ:PL 0/1:3,3:6:41:108,0,41 chr1 46964946 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 46996204 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 47074876 . C T 262.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.438;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=2.633;MLEAC=1;MLEAF=0.500;MQ=51.37;MQRankSum=-1.353;QD=4.78;ReadPosRankSum=1.861;SOR=1.192 GT:AD:DP:GQ:PL 0/1:40,15:55:99:291,0,1086 chr1 47082526 . G A 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.303;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.87;MQRankSum=0.850;QD=7.26;ReadPosRankSum=-0.672;SOR=0.473 GT:AD:DP:GQ:PL 0/1:14,8:22:99:188,0,450 chr1 47142306 . C G 1425.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.970;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=4.712;MLEAC=1;MLEAF=0.500;MQ=55.10;MQRankSum=-0.319;QD=14.85;ReadPosRankSum=-0.443;SOR=0.164 GT:AD:DP:GQ:PL 0/1:51,45:96:99:1454,0,1775 chr1 47185313 . A G 278.90 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=30.99;ReadPosRankSum=1.593;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,8:9:15:307,0,15 chr1 47187207 . T A 2367.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.777;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=1.756;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.28;ReadPosRankSum=-2.792;SOR=0.963 GT:AD:DP:GQ:PL 0/1:74,63:137:99:2396,0,4447 chr1 47190144 . A G 291.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.265;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=3.274;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.16;ReadPosRankSum=-0.136;SOR=1.981 GT:AD:DP:GQ:PL 0/1:8,9:17:99:320,0,248 chr1 47224170 . C G 609.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.722;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=1.747;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.18;ReadPosRankSum=1.353;SOR=1.255 GT:AD:DP:GQ:PL 0/1:23,20:43:99:638,0,716 chr1 47225418 . T C 95.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=-0.366;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,4:8:99:124,0,113 chr1 47251517 . A G 1161.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.925;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=1.466;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.85;ReadPosRankSum=-0.837;SOR=0.853 GT:AD:DP:GQ:PL 0/1:66,52:118:99:1190,0,1685 chr1 47269608 . T C 458.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.395;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.19;ReadPosRankSum=-1.778;SOR=0.960 GT:AD:DP:GQ:PL 0/1:24,17:41:99:487,0,777 chr1 47287733 . G A 735.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.363;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.87;ReadPosRankSum=0.716;SOR=0.632 GT:AD:DP:GQ:PL 0/1:34,28:62:99:764,0,997 chr1 47299818 . T C 770.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.409;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.41;ReadPosRankSum=-2.074;SOR=1.209 GT:AD:DP:GQ:PL 0/1:14,22:36:99:799,0,445 chr1 47301469 . C A 479.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.268;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.99;ReadPosRankSum=-1.081;SOR=1.051 GT:AD:DP:GQ:PL 0/1:10,14:24:99:508,0,333 chr1 47302242 . G A 1300.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.627;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=2.559;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.93;ReadPosRankSum=-0.899;SOR=0.441 GT:AD:DP:GQ:PL 0/1:57,52:109:99:1329,0,1379 chr1 47304769 . A C 328.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.44;ReadPosRankSum=1.410;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,10:20:99:357,0,358 chr1 47304794 . T C 722.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.847;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.02;ReadPosRankSum=0.216;SOR=0.914 GT:AD:DP:GQ:PL 0/1:17,21:38:99:751,0,596 chr1 47305114 . T A 465.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.53;ReadPosRankSum=0.923;SOR=0.576 GT:AD:DP:GQ:PL 0/1:16,14:30:99:494,0,578 chr1 47333967 . G C 206.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.050;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.91;ReadPosRankSum=0.000;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,9:13:60:235,0,60 chr1 47350138 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 47359085 . G A 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 47368274 . G A 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.75;ReadPosRankSum=-0.210;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:98:224,0,98 chr1 47374337 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 47374399 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 47375437 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 47376759 . G A 901.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.21;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,28:28:84:930,84,0 chr1 47376994 . A T 1213.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.82;SOR=1.251 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1242,141,0 chr1 47377105 . C T 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.166;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.55;ReadPosRankSum=1.791;SOR=0.784 GT:AD:DP:GQ:PL 0/1:11,5:16:99:149,0,371 chr1 47417347 . T C 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.264;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=0.355;SOR=1.508 GT:AD:DP:GQ:PL 0/1:5,5:10:96:145,0,96 chr1 47417352 . A G 337.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:30:366,30,0 chr1 47439237 . G C 1262.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.57;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1291,119,0 chr1 47449503 . G T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 47449561 . A T 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 47491488 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 47504181 . A T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 47533235 . G T 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.79;ReadPosRankSum=-0.253;SOR=0.368 GT:AD:DP:GQ:PL 0/1:2,4:6:66:117,0,66 chr1 47569106 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 47573391 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 47587051 . A G 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr1 47628660 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 47628693 . T C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 47628704 . A C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.25;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 47707721 . C A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 47748951 . C T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 47751734 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 47767433 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 47775389 . G A 1599.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.519;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=0.720;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.91;ReadPosRankSum=0.529;SOR=0.596 GT:AD:DP:GQ:PL 0/1:54,61:115:99:1628,0,1360 chr1 47788916 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.67;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr1 47788925 . T A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 47792502 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 47794402 . G A 450.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=2.496;SOR=0.382 GT:AD:DP:GQ:PL 0/1:21,14:35:99:479,0,771 chr1 47794433 . G A 810.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.895;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=8.025;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.08;ReadPosRankSum=-0.724;SOR=0.073 GT:AD:DP:GQ:PL 0/1:35,27:62:99:839,0,1241 chr1 47794444 . C T 1468.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.701;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=11.785;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.58;ReadPosRankSum=-0.538;SOR=2.651 GT:AD:DP:GQ:PL 0/1:32,43:75:99:1497,0,909 chr1 47798662 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 47801852 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 47871389 . C T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.253;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 47887354 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 47924428 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 47956591 . T C 205.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.72;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:234,24,0 chr1 48067000 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 48068161 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 48080523 . T C 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 48089572 . G C 85.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.25;ReadPosRankSum=0.180;SOR=0.916 GT:AD:DP:GQ:PL 0/1:4,3:7:99:114,0,151 chr1 48089579 . A T 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.79;ReadPosRankSum=-0.385;SOR=0.991 GT:AD:DP:GQ:PL 0/1:3,3:6:99:117,0,117 chr1 48089648 . G A 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 48219763 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 48224557 . C A 890.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.15;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,24:24:72:919,72,0 chr1 48232061 . T G 2513.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.23;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2542,234,0 chr1 48232256 . T C 981.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.20;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,25:25:75:1010,75,0 chr1 48233893 . C T 499.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.26;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:528,39,0 chr1 48242166 . A G 2245.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.08;SOR=2.419 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2274,183,0 chr1 48247722 . C T 846.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.87;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:875,63,0 chr1 48298996 . C A 379.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.34;ReadPosRankSum=1.689;SOR=1.371 GT:AD:DP:GQ:PL 0/1:6,11:17:99:408,0,197 chr1 48325648 . C G 193.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.998;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.15;ReadPosRankSum=0.076;SOR=0.293 GT:AD:DP:GQ:PL 0/1:5,7:12:99:222,0,173 chr1 48338452 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 48403534 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 48540895 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 48540897 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 48577757 . C A 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr1 48587261 . T C 2445.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.746;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.56;ReadPosRankSum=-1.581;SOR=0.708 GT:AD:DP:GQ:PL 0/1:82,86:168:99:2474,0,2139 chr1 48591023 . T C 1007.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.459;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=1.081;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.04;ReadPosRankSum=0.491;SOR=0.525 GT:AD:DP:GQ:PL 0/1:32,35:67:99:1036,0,1032 chr1 48591100 . A C 82.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.35;ReadPosRankSum=-1.930;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:111,0,201 chr1 48634660 . C T 4043.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=3.005 GT:AD:DP:GQ:PL 1/1:0,111:111:99:4072,334,0 chr1 48647647 . T C 2422.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.91;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2451,243,0 chr1 48663048 . C T 3405.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.06;SOR=2.256 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3434,300,0 chr1 48663476 . G A 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.32;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr1 48663532 . C T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.65;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 48727722 . G T 1088.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.03;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1117,90,0 chr1 48758571 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 48758912 . G T 5443.77 PASS AC=2;AF=1.00;AN=2;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.02;SOR=0.983 GT:AD:DP:GQ:PL 1/1:0,170:170:99:5472,510,0 chr1 48818131 . G A 209.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.535;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=3.039;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=1.350;SOR=1.911 GT:AD:DP:GQ:PL 0/1:11,7:18:99:238,0,357 chr1 48867052 . A C 933.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.821;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=0.884;SOR=0.772 GT:AD:DP:GQ:PL 0/1:42,36:78:99:962,0,1223 chr1 48867297 . A G 498.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.369;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=3.216;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.88;ReadPosRankSum=0.744;SOR=0.276 GT:AD:DP:GQ:PL 0/1:22,20:42:99:527,0,667 chr1 48898985 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 49045752 . A G 1236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.728;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.62;ReadPosRankSum=-1.385;SOR=0.625 GT:AD:DP:GQ:PL 0/1:46,52:98:99:1265,0,1292 chr1 49074357 . C T 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr1 49245609 . C T 609.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.525;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=5.476;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.73;ReadPosRankSum=1.015;SOR=1.714 GT:AD:DP:GQ:PL 0/1:31,21:52:99:638,0,915 chr1 49697168 . C T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 49697689 . A G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 49845782 . G A 1431.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.370;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=1.902;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.84;ReadPosRankSum=1.179;SOR=1.017 GT:AD:DP:GQ:PL 0/1:37,48:85:99:1460,0,1141 chr1 49846528 . A C 190.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.857;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.67;ReadPosRankSum=-0.433;SOR=0.223 GT:AD:DP:GQ:PL 0/1:6,7:13:99:219,0,199 chr1 49866053 . T C 245.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.31;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:27:274,27,0 chr1 50005175 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 50034917 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 50106424 . C A 1927.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.031;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=1.338;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.87;ReadPosRankSum=-0.922;SOR=0.835 GT:AD:DP:GQ:PL 0/1:68,71:139:99:1956,0,1740 chr1 50195309 . A G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.61;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 50195739 . C T 5563.77 PASS AC=2;AF=1.00;AN=2;DP=169;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.92;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,169:169:99:5592,505,0 chr1 50196016 . T C 593.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.36;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:622,48,0 chr1 50200843 . C T 6155.77 PASS AC=2;AF=1.00;AN=2;DP=179;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.39;SOR=1.789 GT:AD:DP:GQ:PL 1/1:0,179:179:99:6184,538,0 chr1 50209589 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 50249206 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 50292213 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 50316760 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 50381075 . C G 88.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.86;QD=22.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:116,12,0 chr1 50385517 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 50392415 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 50396214 . G T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 50396315 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 50399297 . G A 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr1 50409158 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 50418558 . G C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.12;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 50419106 . G A 537.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.43;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:42:566,42,0 chr1 50441200 . G T 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=1.383;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,137 chr1 50472176 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 50475368 . T C 304.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.672;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=2.876;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.29;ReadPosRankSum=-1.089;SOR=1.659 GT:AD:DP:GQ:PL 0/1:17,10:27:99:333,0,561 chr1 50491837 . A T 1534.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.942;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.09;ReadPosRankSum=-0.591;SOR=0.723 GT:AD:DP:GQ:PL 1/1:1,50:51:99:1563,143,0 chr1 50503319 . T A 104.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:132,12,0 chr1 50846548 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr1 51306094 . G C 2859.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.518;ClippingRankSum=0.000;DP=223;ExcessHet=3.0103;FS=4.543;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=0.708;SOR=0.615 GT:AD:DP:GQ:PL 0/1:110,112:222:99:2888,0,2748 chr1 51406263 . C T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 51408279 . G A 2972.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.57;SOR=1.637 GT:AD:DP:GQ:PL 1/1:0,86:86:99:3001,258,0 chr1 51771919 . G A 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.335;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=-0.605;SOR=2.179 GT:AD:DP:GQ:PL 0/1:5,6:11:99:218,0,142 chr1 51786334 . A G 133.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:161,12,0 chr1 51790457 . G A 1409.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.650;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.37;ReadPosRankSum=-0.551;SOR=0.758 GT:AD:DP:GQ:PL 0/1:59,55:114:99:1438,0,1645 chr1 51790687 . A G 1190.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.578;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=1.035;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.26;ReadPosRankSum=-2.297;SOR=0.931 GT:AD:DP:GQ:PL 0/1:30,39:69:99:1219,0,932 chr1 51798392 . A G 1359.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.267;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=0.735;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=1.775;SOR=0.565 GT:AD:DP:GQ:PL 0/1:49,56:105:99:1388,0,1209 chr1 51800570 . G A 4695.77 PASS AC=2;AF=1.00;AN=2;DP=153;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.69;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,153:153:99:4724,459,0 chr1 51813978 . T G 1647.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.51;SOR=1.118 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1676,162,0 chr1 51818010 . T C 2170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.540;ClippingRankSum=0.000;DP=178;ExcessHet=3.0103;FS=5.315;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.20;ReadPosRankSum=-1.371;SOR=0.422 GT:AD:DP:GQ:PL 0/1:87,91:178:99:2199,0,2021 chr1 51818346 . A C 384.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.96;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:30:413,30,0 chr1 51825312 . T G 1158.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.19;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1187,108,0 chr1 51827898 . G A 1984.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.01;SOR=1.647 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2013,185,0 chr1 51878742 . A C 1667.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.91;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1696,138,0 chr1 51909752 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 51934425 . A G 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 51937184 . T G 2376.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.95;SOR=2.049 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2405,210,0 chr1 51937284 . G A 5297.77 PASS AC=2;AF=1.00;AN=2;DP=164;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.50;SOR=1.324 GT:AD:DP:GQ:PL 1/1:0,163:163:99:5326,489,0 chr1 51937604 . T A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 51949658 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 51975641 . C A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 51975720 . G A 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr1 51977004 . G A 4367.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.362;ClippingRankSum=0.000;DP=376;ExcessHet=3.0103;FS=2.717;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.62;ReadPosRankSum=0.257;SOR=0.843 GT:AD:DP:GQ:PL 0/1:197,179:376:99:4396,0,5199 chr1 52019663 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 52023650 . G A 3686.77 PASS AC=2;AF=1.00;AN=2;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.63;SOR=1.695 GT:AD:DP:GQ:PL 1/1:0,113:113:99:3715,339,0 chr1 52024746 . C T 1235.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.40;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1264,111,0 chr1 52028907 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 52051740 . A G 4540.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.90;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,138:138:99:4569,413,0 chr1 52052132 . T C 304.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.96;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:333,24,0 chr1 52056104 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 52056126 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 52064651 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 52078302 . C T 62.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:90,9,0 chr1 52104944 . C A 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 52136003 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 52160509 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 52160511 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 52263760 . C G 746.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=6.518 GT:AD:DP:GQ:PL 1/1:0,25:25:74:775,74,0 chr1 52278124 . G A 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.328;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 52354216 . A G 465.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.83;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,13:13:39:494,39,0 chr1 52354554 . G A 5973.77 PASS AC=2;AF=1.00;AN=2;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.39;SOR=1.447 GT:AD:DP:GQ:PL 1/1:0,169:169:99:6002,507,0 chr1 52406019 . C T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.69;ReadPosRankSum=0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:107,0,30 chr1 52410890 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.07;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 52465026 . T C 909.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.147;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=6.115;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.91;ReadPosRankSum=-0.181;SOR=0.207 GT:AD:DP:GQ:PL 0/1:28,33:61:99:938,0,772 chr1 52525966 . C T 2162.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.77;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2191,198,0 chr1 52602242 . T G 309.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.42;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:338,27,0 chr1 52606782 . T C 11077.77 PASS AC=2;AF=1.00;AN=2;DP=336;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,336:336:99:11106,1009,0 chr1 52607069 . A G 844.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.36;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,22:22:66:873,66,0 chr1 52607124 . G C 418.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.74;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:447,33,0 chr1 52609308 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 52687760 . T C 3865.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.167;ClippingRankSum=0.000;DP=234;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.59;ReadPosRankSum=0.148;SOR=0.727 GT:AD:DP:GQ:PL 0/1:103,130:233:99:3894,0,2914 chr1 52698548 . C T 187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.198;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=0.980;SOR=0.175 GT:AD:DP:GQ:PL 0/1:7,7:14:99:216,0,250 chr1 52705354 . T A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 52709427 . A G 38.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.319;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.85;ReadPosRankSum=0.489;SOR=0.818 GT:AD:DP:GQ:PL 0/1:5,3:8:67:67,0,112 chr1 52726515 . C T 96.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:124,9,0 chr1 52730994 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 52731017 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 52771854 . G A 510.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.61;ReadPosRankSum=1.065;SOR=0.760 GT:AD:DP:GQ:PL 0/1:14,15:29:99:539,0,497 chr1 52772652 . G T 203.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=1.913;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.99;ReadPosRankSum=-0.908;SOR=1.270 GT:AD:DP:GQ:PL 0/1:7,10:17:99:232,0,173 chr1 52775688 . C T 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.44;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:98,0,30 chr1 52779800 . A T 1657.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.582;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=1.589;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.56;ReadPosRankSum=-0.838;SOR=0.549 GT:AD:DP:GQ:PL 0/1:68,64:132:99:1686,0,1873 chr1 52784978 . G A 2840.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.470;ClippingRankSum=0.000;DP=186;ExcessHet=3.0103;FS=0.545;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.27;ReadPosRankSum=1.624;SOR=0.635 GT:AD:DP:GQ:PL 0/1:81,105:186:99:2869,0,2034 chr1 52785243 . T C 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.253;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr1 52805553 . T C 162.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.616;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.80;ReadPosRankSum=1.248;SOR=0.330 GT:AD:DP:GQ:PL 0/1:4,7:11:99:191,0,129 chr1 52828801 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 52842993 . C G 625.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.080;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=4.945;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.05;ReadPosRankSum=-0.622;SOR=0.654 GT:AD:DP:GQ:PL 0/1:14,25:39:99:654,0,353 chr1 52843135 . T C 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=0.718;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:259,0,134 chr1 52843186 . T G 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-1.282;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 52854602 . G T 3498.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.098;ClippingRankSum=0.000;DP=224;ExcessHet=3.0103;FS=0.501;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.62;ReadPosRankSum=-1.165;SOR=0.637 GT:AD:DP:GQ:PL 0/1:98,126:224:99:3527,0,2570 chr1 52857820 . C A 1951.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=2.917 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1980,165,0 chr1 52857899 . T C 322.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.67;ReadPosRankSum=0.841;SOR=0.540 GT:AD:DP:GQ:PL 0/1:12,10:22:99:351,0,435 chr1 52866773 . G C 251.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=-0.183;SOR=0.512 GT:AD:DP:GQ:PL 0/1:10,8:18:99:280,0,360 chr1 52867444 . A G 90.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.951;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.67;ReadPosRankSum=1.550;SOR=0.527 GT:AD:DP:GQ:PL 0/1:12,4:16:99:119,0,419 chr1 52874124 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.80;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 52889952 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 52897146 . T C 481.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.27;ReadPosRankSum=-0.433;SOR=0.293 GT:AD:DP:GQ:PL 0/1:11,14:25:99:510,0,384 chr1 52899304 . A G 3735.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.472;ClippingRankSum=0.000;DP=272;ExcessHet=3.0103;FS=2.070;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.73;ReadPosRankSum=1.732;SOR=0.558 GT:AD:DP:GQ:PL 0/1:126,146:272:99:3764,0,3180 chr1 52899563 . G C 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.171;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.52;ReadPosRankSum=0.364;SOR=1.112 GT:AD:DP:GQ:PL 0/1:10,7:17:99:173,0,264 chr1 52921707 . G C 617.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.078;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.37;ReadPosRankSum=0.219;SOR=0.641 GT:AD:DP:GQ:PL 0/1:22,21:43:99:646,0,687 chr1 52948417 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 53001906 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 53047765 . T C 489.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.401;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.21;ReadPosRankSum=-0.126;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,14:18:99:518,0,113 chr1 53069806 . G A 911.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.104;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.21;ReadPosRankSum=-0.466;SOR=0.760 GT:AD:DP:GQ:PL 0/1:35,34:69:99:940,0,982 chr1 53071594 . G A 2392.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.079;ClippingRankSum=0.000;DP=188;ExcessHet=3.0103;FS=0.532;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=-0.345;SOR=0.646 GT:AD:DP:GQ:PL 0/1:92,96:188:99:2421,0,2356 chr1 53077440 . C G 5642.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.55;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,138:138:99:5671,415,0 chr1 53078767 . G A 10917.77 PASS AC=2;AF=1.00;AN=2;DP=356;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.84;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,354:354:99:10946,1055,0 chr1 53078925 . T C 4517.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.757;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=34.49;ReadPosRankSum=-0.622;SOR=0.628 GT:AD:DP:GQ:PL 1/1:1,130:131:99:4546,352,0 chr1 53080501 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 53084515 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 53087813 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 53088030 . A G 3178.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.18;SOR=1.240 GT:AD:DP:GQ:PL 1/1:0,93:93:99:3207,279,0 chr1 53088082 . T C 4733.77 PASS AC=2;AF=1.00;AN=2;DP=134;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.83;SOR=1.239 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4762,403,0 chr1 53090111 . A C 1026.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.11;SOR=1.542 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1055,99,0 chr1 53091812 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 53092598 . A G 9673.77 PASS AC=2;AF=1.00;AN=2;DP=284;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.30;SOR=1.551 GT:AD:DP:GQ:PL 1/1:0,282:282:99:9702,847,0 chr1 53093008 . C A 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.50;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 53093120 . G A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 53093638 . T C 2977.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.58;SOR=3.584 GT:AD:DP:GQ:PL 1/1:0,81:81:99:3006,244,0 chr1 53094024 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 53094629 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.58;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 53094633 . T C 149.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.85;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:177,12,0 chr1 53094704 . C T 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr1 53094756 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 53103727 . A G 478.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.19;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:507,39,0 chr1 53105616 . C G 1088.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.79;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1117,90,0 chr1 53108404 . G A 1206.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.57;SOR=5.486 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1235,93,0 chr1 53108451 . C T 2534.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.73;SOR=3.881 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2563,207,0 chr1 53113510 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 53113730 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 53113870 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 53114485 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 53116214 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 53122051 . C G 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 53125791 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 53128776 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 53128986 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 53129502 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 53129583 . G T 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 53132343 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 53132356 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 53134406 . A G 4507.77 PASS AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.97;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,141:141:99:4536,423,0 chr1 53134678 . A G 321.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.18;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:30:350,30,0 chr1 53141332 . C T 31.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0 chr1 53142052 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 53142703 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 53143683 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 53151134 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 53155673 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 53155722 . A C 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr1 53159385 . G C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 53209860 . T C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.126;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 53210776 . G A 3696.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.572;ClippingRankSum=0.000;DP=247;ExcessHet=3.0103;FS=0.980;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.03;ReadPosRankSum=-0.004;SOR=0.781 GT:AD:DP:GQ:PL 0/1:119,127:246:99:3725,0,3518 chr1 53214418 . G A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 53218249 . C G 2220.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.916;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=4.248;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-0.062;SOR=0.424 GT:AD:DP:GQ:PL 0/1:61,71:132:99:2249,0,1811 chr1 53218652 . A G 872.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.568;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=2.085;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.96;ReadPosRankSum=0.680;SOR=0.416 GT:AD:DP:GQ:PL 0/1:42,31:73:99:901,0,1429 chr1 53218853 . C G 1542.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.855;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=3.461;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.53;ReadPosRankSum=-0.598;SOR=1.050 GT:AD:DP:GQ:PL 0/1:53,61:114:99:1571,0,1430 chr1 53220711 . C G 277.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.754;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.34;ReadPosRankSum=-0.053;SOR=0.446 GT:AD:DP:GQ:PL 0/1:6,11:17:99:306,0,165 chr1 53228716 . T C 243.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.139;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.31;ReadPosRankSum=-1.408;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,9:12:89:272,0,89 chr1 53250744 . G A 1622.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.447;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=5.115;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.19;ReadPosRankSum=-0.344;SOR=1.154 GT:AD:DP:GQ:PL 0/1:80,65:145:99:1651,0,2089 chr1 53255051 . T C 642.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.908;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.480;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.68;ReadPosRankSum=-0.658;SOR=0.421 GT:AD:DP:GQ:PL 0/1:17,24:41:99:671,0,485 chr1 53257080 . A C 135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.505;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.49;ReadPosRankSum=-0.060;SOR=0.307 GT:AD:DP:GQ:PL 0/1:10,6:16:99:164,0,328 chr1 53257518 . G T 3363.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.005;ClippingRankSum=0.000;DP=276;ExcessHet=3.0103;FS=0.448;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.23;ReadPosRankSum=0.131;SOR=0.638 GT:AD:DP:GQ:PL 0/1:146,129:275:99:3392,0,3979 chr1 53257677 . T C 567.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.35;ReadPosRankSum=-0.440;SOR=0.551 GT:AD:DP:GQ:PL 0/1:20,17:37:99:596,0,719 chr1 53266643 . G T 2634.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.412;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.57;ReadPosRankSum=1.744;SOR=0.695 GT:AD:DP:GQ:PL 0/1:74,85:159:99:2663,0,2284 chr1 53270941 . A G 1026.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.081;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.34;ReadPosRankSum=-0.510;SOR=0.667 GT:AD:DP:GQ:PL 0/1:25,31:56:99:1055,0,774 chr1 53272421 . C T 661.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.001;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.41;ReadPosRankSum=-0.138;SOR=0.598 GT:AD:DP:GQ:PL 0/1:20,18:38:99:690,0,1217 chr1 53272428 . C T 750.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.661;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.32;ReadPosRankSum=0.405;SOR=1.002 GT:AD:DP:GQ:PL 0/1:25,21:46:99:779,0,1290 chr1 53272511 . A G 1861.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.063;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.21;ReadPosRankSum=0.258;SOR=0.668 GT:AD:DP:GQ:PL 0/1:63,68:131:99:1890,0,1750 chr1 53276834 . A G 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.798;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.32;ReadPosRankSum=1.606;SOR=0.818 GT:AD:DP:GQ:PL 0/1:19,8:27:99:253,0,595 chr1 53280462 . G A 425.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.887;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=2.585;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.52;ReadPosRankSum=0.656;SOR=0.324 GT:AD:DP:GQ:PL 0/1:29,21:50:99:454,0,811 chr1 53280923 . A T 606.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.058;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=3.405;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.11;ReadPosRankSum=-0.329;SOR=0.232 GT:AD:DP:GQ:PL 0/1:21,22:43:99:635,0,600 chr1 53289219 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 53289479 . T C 1805.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.479;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.36;ReadPosRankSum=0.126;SOR=0.666 GT:AD:DP:GQ:PL 0/1:91,68:159:99:1834,0,2672 chr1 53291482 . C A 58.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:86,9,0 chr1 53299747 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 53299762 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 53311871 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 53345168 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 53346539 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 53361223 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.68;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 53361283 . A T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.98;MQRankSum=0.674;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 53361989 . C T 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 53371157 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.253;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,179 chr1 53379718 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 53385357 . C T 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:109,0,156 chr1 53385366 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.189;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=-0.566;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,4:7:75:75,0,136 chr1 53501781 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 53509314 . G T 5771.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.958;ClippingRankSum=0.000;DP=181;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.07;ReadPosRankSum=-0.565;SOR=0.506 GT:AD:DP:GQ:PL 1/1:1,179:180:99:5800,530,0 chr1 53521010 . C T 388.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.21;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:417,30,0 chr1 53524648 . C T 1433.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.21;SOR=7.168 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1462,105,0 chr1 53525042 . T C 1149.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.53;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1178,90,0 chr1 53541939 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 53546196 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 53546230 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 53547402 . A T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 53559540 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 53573653 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 53594436 . A G 1627.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.803;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=1.375;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.71;ReadPosRankSum=0.524;SOR=0.573 GT:AD:DP:GQ:PL 0/1:82,57:139:99:1656,0,2468 chr1 53598265 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 53599975 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 53602028 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 53607350 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 53612058 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 53638803 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 53642821 . G A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 53681667 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 53687030 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 53715995 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 53731468 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 53806021 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 53806039 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 53849248 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 53849251 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 53849257 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 53890440 . C T 2469.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.38;SOR=1.288 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2498,222,0 chr1 53904591 . A T 4233.77 PASS AC=2;AF=1.00;AN=2;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.68;SOR=1.592 GT:AD:DP:GQ:PL 1/1:0,138:138:99:4262,412,0 chr1 53909783 . G A 1157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.738;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=1.741;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=0.380;SOR=0.900 GT:AD:DP:GQ:PL 0/1:55,41:96:99:1186,0,1514 chr1 53909897 . C A 2327.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.188;ClippingRankSum=0.000;DP=169;ExcessHet=3.0103;FS=1.196;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.77;ReadPosRankSum=0.503;SOR=0.805 GT:AD:DP:GQ:PL 0/1:79,90:169:99:2356,0,1906 chr1 53910028 . C T 1773.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.540;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=1.895;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.74;ReadPosRankSum=0.803;SOR=0.471 GT:AD:DP:GQ:PL 0/1:37,63:100:99:1802,0,889 chr1 54007815 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 54008799 . T C 1656.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.87;SOR=7.523 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1685,126,0 chr1 54010650 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.85;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 54012053 . T G 1815.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.77;SOR=7.658 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1844,135,0 chr1 54017242 . G A 417.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.14;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:38:446,38,0 chr1 54018021 . C T 3066.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.46;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,89:89:99:3095,262,0 chr1 54019009 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 54021452 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.02;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr1 54021473 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 54041522 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 54068793 . C A 283.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.114;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=2.928;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.09;ReadPosRankSum=-0.599;SOR=0.796 GT:AD:DP:GQ:PL 0/1:26,14:40:99:312,0,681 chr1 54096243 . C T 2606.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.84;SOR=2.712 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2635,222,0 chr1 54122383 . G C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 54122437 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 54124033 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 54141131 . C T 9128.77 PASS AC=2;AF=1.00;AN=2;DP=268;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.19;SOR=1.422 GT:AD:DP:GQ:PL 1/1:0,267:267:99:9157,800,0 chr1 54141378 . A G 11759.77 PASS AC=2;AF=1.00;AN=2;DP=365;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.40;SOR=1.163 GT:AD:DP:GQ:PL 1/1:0,363:363:99:11788,1089,0 chr1 54141484 . G A 5245.77 PASS AC=2;AF=1.00;AN=2;DP=160;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.99;SOR=1.878 GT:AD:DP:GQ:PL 1/1:0,159:159:99:5274,477,0 chr1 54141610 . T C 719.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.51;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:748,54,0 chr1 54145161 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 54149109 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 54152762 . A T 4688.77 PASS AC=2;AF=1.00;AN=2;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.25;SOR=1.108 GT:AD:DP:GQ:PL 1/1:0,141:141:99:4717,423,0 chr1 54160009 . T C 62.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:90,9,0 chr1 54163013 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 54163031 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 54163752 . A T 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr1 54168294 . G C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 54171494 . T C 1298.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.18;SOR=2.554 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1327,114,0 chr1 54190978 . C G 522.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.45;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:551,42,0 chr1 54218183 . C G 3909.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.53;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3938,372,0 chr1 54220701 . T C 7289.77 PASS AC=2;AF=1.00;AN=2;DP=217;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.59;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,217:217:99:7318,651,0 chr1 54220791 . C T 6687.77 PASS AC=2;AF=1.00;AN=2;DP=205;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.62;SOR=1.118 GT:AD:DP:GQ:PL 1/1:0,205:205:99:6716,616,0 chr1 54232438 . T A 193.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.11;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:222,15,0 chr1 54232439 . T A 193.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.87;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:222,15,0 chr1 54232535 . A T 211.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.53;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:27:240,27,0 chr1 54237524 . A C 147.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:176,15,0 chr1 54237525 . T A 147.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:176,15,0 chr1 54237957 . C T 1025.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.416;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.28;ReadPosRankSum=-0.054;SOR=1.179 GT:AD:DP:GQ:PL 0/1:32,31:63:99:1054,0,1079 chr1 54238029 . C A 5404.77 PASS AC=2;AF=1.00;AN=2;DP=162;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.36;SOR=1.923 GT:AD:DP:GQ:PL 1/1:0,162:162:99:5433,487,0 chr1 54238956 . C T 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr1 54241060 . A G 6319.77 PASS AC=2;AF=1.00;AN=2;DP=195;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.41;SOR=1.232 GT:AD:DP:GQ:PL 1/1:0,195:195:99:6348,585,0 chr1 54245275 . C T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 54251981 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 54256952 . T C 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr1 54257054 . A T 536.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.141;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.13;ReadPosRankSum=0.712;SOR=0.970 GT:AD:DP:GQ:PL 0/1:19,19:38:99:565,0,509 chr1 54257985 . T C 1028.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.96;SOR=5.211 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1057,81,0 chr1 54258716 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 54259089 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 54274217 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 54276945 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 54289418 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 54376165 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 54401719 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 54404143 . T C 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 54452661 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 54456330 . A G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr1 54456348 . T C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr1 54461776 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 54474754 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 54479748 . G C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 54483389 . C G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 54488282 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 54543471 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 54548422 . C T 1656.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.526;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=3.992;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.41;ReadPosRankSum=-1.421;SOR=1.126 GT:AD:DP:GQ:PL 0/1:46,44:90:99:1685,0,2195 chr1 54548426 . C T 1635.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.556;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=4.151;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.80;ReadPosRankSum=-0.586;SOR=1.215 GT:AD:DP:GQ:PL 0/1:45,42:87:99:1664,0,2198 chr1 54548487 . C T 866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.875;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=9.327;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.610;SOR=1.855 GT:AD:DP:GQ:PL 0/1:34,32:66:99:895,0,903 chr1 54580310 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 54601086 . T C 801.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.333;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.91;ReadPosRankSum=-0.418;SOR=1.022 GT:AD:DP:GQ:PL 0/1:15,20:35:99:830,0,1454 chr1 54604117 . C A 176.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.605;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.07;ReadPosRankSum=0.938;SOR=0.074 GT:AD:DP:GQ:PL 0/1:5,6:11:99:205,0,176 chr1 54604313 . T C 2377.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.437;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=1.957;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.92;ReadPosRankSum=1.089;SOR=0.519 GT:AD:DP:GQ:PL 0/1:92,92:184:99:2406,0,2314 chr1 54605351 . T G 306.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.28;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:335,24,0 chr1 54607053 . T C 2047.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.408;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.42;ReadPosRankSum=-0.099;SOR=1.143 GT:AD:DP:GQ:PL 0/1:78,64:142:99:2076,0,2388 chr1 54607723 . G A 292.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.26;ReadPosRankSum=-0.917;SOR=0.693 GT:AD:DP:GQ:PL 0/1:9,9:18:99:321,0,321 chr1 54608746 . T C 292.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.29;QD=28.08;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:321,24,0 chr1 54608790 . T C 292.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.96;MQRankSum=-2.707;QD=17.22;ReadPosRankSum=-0.493;SOR=0.223 GT:AD:DP:GQ:PL 0/1:8,9:17:99:321,0,283 chr1 54609167 . T A 3070.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.284;ClippingRankSum=0.000;DP=201;ExcessHet=3.0103;FS=3.961;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.28;ReadPosRankSum=0.553;SOR=1.024 GT:AD:DP:GQ:PL 0/1:100,101:201:99:3099,0,2951 chr1 54609249 . G A 918.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.828;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.887;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.59;ReadPosRankSum=0.240;SOR=0.824 GT:AD:DP:GQ:PL 0/1:41,32:73:99:947,0,1204 chr1 54609779 . G A 3585.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.080;ClippingRankSum=0.000;DP=257;ExcessHet=3.0103;FS=2.131;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.95;ReadPosRankSum=-0.063;SOR=0.860 GT:AD:DP:GQ:PL 0/1:125,132:257:99:3614,0,3446 chr1 54612197 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 54612300 . T C 355.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.19;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:30:384,30,0 chr1 54612373 . T C 879.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.29;SOR=4.003 GT:AD:DP:GQ:PL 1/1:0,23:23:69:908,69,0 chr1 54612751 . C T 446.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.302;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=2.481;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.87;ReadPosRankSum=-2.116;SOR=1.688 GT:AD:DP:GQ:PL 0/1:11,14:25:99:475,0,391 chr1 54612944 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 54614956 . A G 6335.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-2.490;ClippingRankSum=0.000;DP=173;ExcessHet=3.0103;FS=7.491;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.12;ReadPosRankSum=-0.314;SOR=0.080 GT:AD:DP:GQ:PL 1/1:6,161:167:99:6364,291,0 chr1 54614962 . G A 2339.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.234;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=2.352;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.00;ReadPosRankSum=0.459;SOR=0.484 GT:AD:DP:GQ:PL 0/1:90,66:156:99:2377,0,3569 chr1 54615171 . C G 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.471;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=2.881;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.56;ReadPosRankSum=0.928;SOR=1.721 GT:AD:DP:GQ:PL 0/1:8,4:12:99:131,0,230 chr1 54619826 . T C 427.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.088;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.84;ReadPosRankSum=-0.640;SOR=1.179 GT:AD:DP:GQ:PL 0/1:14,13:27:99:456,0,435 chr1 54623643 . A C 421.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.85;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:30:450,30,0 chr1 54623644 . T C 421.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.73;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:30:450,30,0 chr1 54623788 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 54623799 . A T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 54624447 . T C 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 54624473 . G T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 54624565 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 54624608 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 54624618 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 54624636 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 54634592 . A C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.31;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 54634655 . T C 519.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.65;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,15:15:45:548,45,0 chr1 54652489 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 54652893 . C G 8151.77 PASS AC=2;AF=1.00;AN=2;DP=242;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.68;SOR=1.012 GT:AD:DP:GQ:PL 1/1:0,242:242:99:8180,726,0 chr1 54653471 . A G 6298.77 PASS AC=2;AF=1.00;AN=2;DP=190;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.15;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,190:190:99:6327,570,0 chr1 54653616 . G C 6102.77 PASS AC=2;AF=1.00;AN=2;DP=173;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.68;SOR=0.801 GT:AD:DP:GQ:PL 1/1:0,173:173:99:6131,519,0 chr1 54653873 . A G 13909.77 PASS AC=2;AF=1.00;AN=2;DP=403;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.60;SOR=0.985 GT:AD:DP:GQ:PL 1/1:0,402:402:99:13938,1207,0 chr1 54657288 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 54663699 . A C 235.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.280;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.72;ReadPosRankSum=1.990;SOR=0.551 GT:AD:DP:GQ:PL 0/1:8,7:15:99:264,0,284 chr1 54664925 . T G 846.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.50;SOR=6.273 GT:AD:DP:GQ:PL 1/1:0,22:22:66:875,66,0 chr1 54665258 . C T 5607.77 PASS AC=2;AF=1.00;AN=2;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.18;SOR=2.126 GT:AD:DP:GQ:PL 1/1:0,169:169:99:5636,506,0 chr1 54665273 . G C 4557.77 PASS AC=2;AF=1.00;AN=2;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.79;SOR=2.629 GT:AD:DP:GQ:PL 1/1:0,131:131:99:4586,393,0 chr1 54665299 . C T 2958.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.36;SOR=2.698 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2987,249,0 chr1 54668706 . C T 3372.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.88;SOR=3.430 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3401,282,0 chr1 54670394 . T G 1581.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.89;SOR=4.565 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1610,123,0 chr1 54670683 . C T 350.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.027;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.49;ReadPosRankSum=-2.268;SOR=1.179 GT:AD:DP:GQ:PL 0/1:6,12:18:99:379,0,145 chr1 54671379 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 54673432 . T C 68.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.64;ReadPosRankSum=0.210;SOR=1.022 GT:AD:DP:GQ:PL 0/1:6,3:9:97:97,0,189 chr1 54673945 . G A 1040.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.429;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=2.038;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=1.365;SOR=0.475 GT:AD:DP:GQ:PL 0/1:36,33:69:99:1069,0,1101 chr1 54674068 . A G 4363.77 PASS AC=2;AF=1.00;AN=2;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.95;SOR=1.313 GT:AD:DP:GQ:PL 1/1:0,141:141:99:4392,422,0 chr1 54674239 . T G 1088.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.120;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=3.305;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.96;ReadPosRankSum=0.528;SOR=1.146 GT:AD:DP:GQ:PL 0/1:40,38:78:99:1117,0,1027 chr1 54678427 . A G 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.19;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 54680224 . G A 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.998;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=0.494;SOR=1.371 GT:AD:DP:GQ:PL 0/1:7,5:12:99:173,0,222 chr1 54686550 . C T 866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.054;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.69;ReadPosRankSum=0.627;SOR=0.933 GT:AD:DP:GQ:PL 0/1:31,28:59:99:895,0,1015 chr1 54689405 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 54694809 . G T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 54759100 . A C 4404.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.772;ClippingRankSum=0.000;DP=371;ExcessHet=3.0103;FS=3.312;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.87;ReadPosRankSum=-0.203;SOR=0.863 GT:AD:DP:GQ:PL 0/1:200,171:371:99:4433,0,5555 chr1 54781424 . G A 1368.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.274;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=5.362;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.04;ReadPosRankSum=-0.459;SOR=0.466 GT:AD:DP:GQ:PL 0/1:41,50:91:99:1397,0,1132 chr1 54782179 . A G 285.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.673;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.04;ReadPosRankSum=-0.182;SOR=0.223 GT:AD:DP:GQ:PL 0/1:9,10:19:99:314,0,319 chr1 54782401 . A G 5463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.682;ClippingRankSum=0.000;DP=438;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.50;ReadPosRankSum=0.365;SOR=0.689 GT:AD:DP:GQ:PL 0/1:233,204:437:99:5492,0,5931 chr1 54784806 . C T 4427.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.867;ClippingRankSum=0.000;DP=353;ExcessHet=3.0103;FS=4.071;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.61;ReadPosRankSum=-0.901;SOR=0.510 GT:AD:DP:GQ:PL 0/1:168,183:351:99:4456,0,4528 chr1 54786016 . T C 8110.77 PASS AC=2;AF=1.00;AN=2;DP=250;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.44;SOR=1.498 GT:AD:DP:GQ:PL 1/1:0,250:250:99:8139,750,0 chr1 54786841 . C T 968.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.147;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=6.098;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.67;ReadPosRankSum=0.318;SOR=1.405 GT:AD:DP:GQ:PL 0/1:44,39:83:99:997,0,1148 chr1 54787307 . A C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 54787673 . G A 1246.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.109;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.39;ReadPosRankSum=-0.524;SOR=0.737 GT:AD:DP:GQ:PL 0/1:40,41:81:99:1275,0,1086 chr1 54787902 . T C 1973.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.35;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,55:55:99:2002,164,0 chr1 54788251 . C T 1438.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.543;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=8.216;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.32;ReadPosRankSum=0.927;SOR=0.205 GT:AD:DP:GQ:PL 0/1:56,52:108:99:1467,0,1718 chr1 54800518 . G T 1834.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.769;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=0.615;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.23;ReadPosRankSum=0.390;SOR=0.762 GT:AD:DP:GQ:PL 0/1:76,74:150:99:1863,0,2025 chr1 54801172 . C T 2552.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.437;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=0.551;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.80;ReadPosRankSum=-0.665;SOR=0.756 GT:AD:DP:GQ:PL 0/1:87,98:185:99:2581,0,2290 chr1 54806101 . A G 629.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.568;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=1.191;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.40;ReadPosRankSum=0.024;SOR=0.449 GT:AD:DP:GQ:PL 0/1:23,24:47:99:658,0,642 chr1 54806808 . T C 681.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.29;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:710,51,0 chr1 54807713 . T G 1616.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.843;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=4.634;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.50;ReadPosRankSum=1.284;SOR=1.278 GT:AD:DP:GQ:PL 0/1:46,52:98:99:1645,0,1352 chr1 54807907 . G T 1074.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.332;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=3.117;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.96;ReadPosRankSum=-0.150;SOR=0.402 GT:AD:DP:GQ:PL 0/1:32,45:77:99:1103,0,799 chr1 54811757 . T A 333.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.075;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.13;ReadPosRankSum=-0.223;SOR=0.569 GT:AD:DP:GQ:PL 0/1:16,14:30:99:362,0,408 chr1 54815858 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 54816883 . A G 3919.77 PASS AC=2;AF=1.00;AN=2;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.68;SOR=3.411 GT:AD:DP:GQ:PL 1/1:0,107:107:99:3948,321,0 chr1 54817306 . A C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 54847226 . G C 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr1 54853755 . C T 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=0.000;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,154 chr1 54854229 . A G 3892.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.91;SOR=1.160 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3921,365,0 chr1 54855830 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 54855878 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 54858165 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 54859200 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 54865188 . T C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 54865293 . T C 1721.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.27;SOR=2.655 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1750,147,0 chr1 54871277 . C G 1605.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.664;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=3.080;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.55;ReadPosRankSum=0.074;SOR=0.305 GT:AD:DP:GQ:PL 0/1:46,51:97:99:1634,0,1593 chr1 54871867 . T C 179.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.38;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:208,15,0 chr1 54873765 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 54875433 . C T 590.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.999;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=5.846;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.55;ReadPosRankSum=0.840;SOR=1.927 GT:AD:DP:GQ:PL 0/1:18,20:38:99:619,0,432 chr1 54875678 . G T 836.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.73;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:865,63,0 chr1 54876242 . T G 310.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.376;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=1.935;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.51;ReadPosRankSum=0.805;SOR=1.488 GT:AD:DP:GQ:PL 0/1:12,11:23:99:339,0,318 chr1 54886292 . G A 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 54912179 . G A 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.316;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=2.632;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.25;ReadPosRankSum=0.998;SOR=0.180 GT:AD:DP:GQ:PL 0/1:6,5:11:99:108,0,184 chr1 54913477 . C T 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.654;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=3.827;MLEAC=1;MLEAF=0.500;MQ=57.13;MQRankSum=-5.796;QD=3.52;ReadPosRankSum=0.828;SOR=1.589 GT:AD:DP:GQ:PL 0/1:35,7:42:99:176,0,1424 chr1 54913481 . T C 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.986;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=3.899;MLEAC=1;MLEAF=0.500;MQ=56.99;MQRankSum=-5.645;QD=3.77;ReadPosRankSum=0.837;SOR=1.550 GT:AD:DP:GQ:PL 0/1:33,7:40:99:179,0,1386 chr1 54913493 . G T 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.935;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=6.832;MLEAC=1;MLEAF=0.500;MQ=56.83;MQRankSum=-5.488;QD=4.20;ReadPosRankSum=0.753;SOR=1.487 GT:AD:DP:GQ:PL 0/1:31,7:38:99:188,0,1281 chr1 54913498 . C G 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.566;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=6.832;MLEAC=1;MLEAF=0.500;MQ=56.83;MQRankSum=-5.488;QD=4.20;ReadPosRankSum=0.735;SOR=1.487 GT:AD:DP:GQ:PL 0/1:31,7:38:99:188,0,1281 chr1 54913551 . C T 238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.115;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.40;MQRankSum=-6.561;QD=5.31;ReadPosRankSum=0.156;SOR=0.478 GT:AD:DP:GQ:PL 0/1:36,9:45:99:267,0,1409 chr1 54913558 . A G 246.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.891;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.620;MLEAC=1;MLEAF=0.500;MQ=57.58;MQRankSum=-6.255;QD=6.02;ReadPosRankSum=0.197;SOR=0.299 GT:AD:DP:GQ:PL 0/1:33,8:41:99:275,0,1359 chr1 54913581 . G A 136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.295;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.92;MQRankSum=-5.680;QD=4.02;ReadPosRankSum=0.362;SOR=0.527 GT:AD:DP:GQ:PL 0/1:28,6:34:99:165,0,1200 chr1 54913583 . G T 136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.235;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.98;MQRankSum=-5.768;QD=3.91;ReadPosRankSum=0.285;SOR=0.610 GT:AD:DP:GQ:PL 0/1:29,6:35:99:165,0,1200 chr1 54913586 . A G 139.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.128;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.92;MQRankSum=-5.680;QD=4.11;ReadPosRankSum=0.136;SOR=0.658 GT:AD:DP:GQ:PL 0/1:28,6:34:99:168,0,1158 chr1 54913608 . G A 148.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.409;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.72;MQRankSum=-5.405;QD=4.80;ReadPosRankSum=0.075;SOR=0.674 GT:AD:DP:GQ:PL 0/1:25,6:31:99:177,0,1028 chr1 54913613 . A G 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.927;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=1.987;MLEAC=1;MLEAF=0.500;MQ=58.15;MQRankSum=-5.219;QD=5.23;ReadPosRankSum=0.087;SOR=1.236 GT:AD:DP:GQ:PL 0/1:24,5:29:99:180,0,990 chr1 54913614 . G C 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.659;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.70;MQRankSum=-5.123;QD=5.42;ReadPosRankSum=0.887;SOR=0.941 GT:AD:DP:GQ:PL 0/1:24,4:28:99:180,0,990 chr1 54918211 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 54980319 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 54980991 . G C 1574.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.15;SOR=1.483 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1603,111,0 chr1 54980998 . C T 1807.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.54;SOR=1.455 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1836,129,0 chr1 54981024 . G A 1919.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.54;SOR=1.316 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1948,177,0 chr1 54984190 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 54985810 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 54985891 . C T 338.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.80;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,11:11:33:367,33,0 chr1 54991664 . A G 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.93;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr1 54992037 . G A 7096.77 PASS AC=2;AF=1.00;AN=2;DP=216;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.86;SOR=0.851 GT:AD:DP:GQ:PL 1/1:0,216:216:99:7125,649,0 chr1 54992142 . C T 4227.77 PASS AC=2;AF=1.00;AN=2;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.52;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,130:130:99:4256,390,0 chr1 54994264 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 54999070 . T C 2293.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.24;SOR=2.406 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2322,207,0 chr1 54999117 . C G 3946.77 PASS AC=2;AF=1.00;AN=2;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.02;SOR=1.757 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3975,348,0 chr1 55006692 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 55031463 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 55040059 . A G 2808.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.21;SOR=1.166 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2837,270,0 chr1 55046876 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.16;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 55048373 . G T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 55048509 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 55050835 . A G 187.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.31;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:216,18,0 chr1 55050938 . G C 474.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.58;ReadPosRankSum=-0.252;SOR=0.223 GT:AD:DP:GQ:PL 0/1:13,14:27:99:503,0,458 chr1 55051108 . G T 9202.77 PASS AC=2;AF=1.00;AN=2;DP=274;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.71;SOR=1.708 GT:AD:DP:GQ:PL 1/1:0,273:273:99:9231,819,0 chr1 55052643 . C T 3424.77 PASS AC=2;AF=1.00;AN=2;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.42;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,109:109:99:3453,326,0 chr1 55052794 . A G 911.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.499;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.36;ReadPosRankSum=0.458;SOR=0.599 GT:AD:DP:GQ:PL 0/1:54,34:88:99:940,0,1382 chr1 55053009 . C T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 55057360 . A G 2978.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.03;SOR=1.006 GT:AD:DP:GQ:PL 1/1:0,93:93:99:3007,279,0 chr1 55057688 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 55057810 . C T 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 55058311 . C T 814.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.83;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,21:21:63:843,63,0 chr1 55058443 . C T 545.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.72;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,19:19:57:574,57,0 chr1 55058524 . A G 780.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.92;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:81:809,81,0 chr1 55058564 . G A 666.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.75;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,21:21:63:695,63,0 chr1 55058714 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.85;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 55059727 . G A 1476.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.24;SOR=1.845 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1505,123,0 chr1 55061012 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 55061650 . G A 5753.77 PASS AC=2;AF=1.00;AN=2;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.65;SOR=1.905 GT:AD:DP:GQ:PL 1/1:0,171:171:99:5782,513,0 chr1 55061806 . A G 555.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.66;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:584,42,0 chr1 55062245 . C T 36.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=12.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:64,9,0 chr1 55063514 . G A 4838.77 PASS AC=2;AF=1.00;AN=2;DP=149;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,149:149:99:4867,447,0 chr1 55065463 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 55072712 . T C 1972.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.68;SOR=3.830 GT:AD:DP:GQ:PL 1/1:0,52:52:99:2001,156,0 chr1 55072879 . T G 1774.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.556;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.45;ReadPosRankSum=-2.052;SOR=0.711 GT:AD:DP:GQ:PL 0/1:67,65:132:99:1803,0,1720 chr1 55075501 . A G 3299.77 PASS AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.73;SOR=1.436 GT:AD:DP:GQ:PL 1/1:0,104:104:99:3328,312,0 chr1 55079842 . C G 571.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,16:16:48:600,48,0 chr1 55081222 . T C 645.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.69;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:674,51,0 chr1 55089612 . G A 767.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.91;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,20:20:60:796,60,0 chr1 55091867 . T C 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.180;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 55092191 . C T 1321.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.26;SOR=2.468 GT:AD:DP:GQ:PL 1/1:0,28:28:90:1350,90,0 chr1 55092309 . T A 212.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.08;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:241,18,0 chr1 55092988 . A G 273.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.22;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:302,24,0 chr1 55095123 . T C 607.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.64;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:636,48,0 chr1 55096452 . G T 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.01;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr1 55101470 . T C 524.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.80;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,16:16:47:553,47,0 chr1 55101737 . A G 3662.77 PASS AC=2;AF=1.00;AN=2;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.13;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3691,342,0 chr1 55106280 . T C 742.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.368;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.28;ReadPosRankSum=-2.601;SOR=0.890 GT:AD:DP:GQ:PL 0/1:27,25:52:99:771,0,834 chr1 55107194 . G A 3491.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.25;SOR=2.193 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3520,315,0 chr1 55109997 . A C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 55125155 . G A 141.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.38;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:170,15,0 chr1 55153749 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 55166109 . G T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.253;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 55172402 . G A 2528.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.42;SOR=1.580 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2557,234,0 chr1 55194146 . G T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 55222343 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr1 55222480 . A G 448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.017;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.37;ReadPosRankSum=0.000;SOR=1.061 GT:AD:DP:GQ:PL 0/1:4,17:21:99:477,0,104 chr1 55223088 . C T 168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.571;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.38;ReadPosRankSum=-0.772;SOR=0.941 GT:AD:DP:GQ:PL 0/1:12,6:18:99:197,0,265 chr1 55223482 . A T 685.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.213;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.19;ReadPosRankSum=0.575;SOR=0.549 GT:AD:DP:GQ:PL 0/1:23,29:52:99:714,0,600 chr1 55225437 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 55225458 . G A 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.414;SOR=2.303 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,179 chr1 55225711 . T C 1416.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.974;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=8.632;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=0.784;SOR=0.830 GT:AD:DP:GQ:PL 0/1:59,56:115:99:1445,0,1485 chr1 55225758 . G A 1209.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.672;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=4.157;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.15;ReadPosRankSum=0.131;SOR=1.143 GT:AD:DP:GQ:PL 0/1:49,43:92:99:1238,0,1386 chr1 55265544 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 55273160 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 55312005 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.83;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 55312006 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 55358347 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 55359380 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 55542393 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 55804864 . T C 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 55856641 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 55856648 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 56284569 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 56284643 . A T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 56333395 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 56333417 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 56333430 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 56406929 . A G 41.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:69,6,0 chr1 56446550 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 56446716 . T C 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr1 56449551 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 56449561 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 56463019 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 56469391 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 56471164 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 56473686 . C G 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr1 56475242 . C T 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 56495682 . T C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 56537124 . G A 1161.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.329;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=1.046;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.91;ReadPosRankSum=-1.831;SOR=0.970 GT:AD:DP:GQ:PL 0/1:33,40:73:99:1190,0,875 chr1 56615386 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 56645496 . C G 146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.839;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.72;ReadPosRankSum=-0.289;SOR=0.551 GT:AD:DP:GQ:PL 0/1:11,8:19:99:175,0,300 chr1 56674151 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.842;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 56679784 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 56679799 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 56692620 . G A 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=-0.441;SOR=0.473 GT:AD:DP:GQ:PL 0/1:8,6:14:99:208,0,291 chr1 56704556 . T C 293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.187;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.32;ReadPosRankSum=-0.722;SOR=0.693 GT:AD:DP:GQ:PL 0/1:9,9:18:99:322,0,288 chr1 56720145 . A G 447.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.039;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.10;ReadPosRankSum=-0.163;SOR=0.830 GT:AD:DP:GQ:PL 0/1:21,16:37:99:476,0,664 chr1 56741843 . C A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr1 56755880 . G T 993.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.395;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=2.612;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.60;ReadPosRankSum=0.395;SOR=1.143 GT:AD:DP:GQ:PL 0/1:20,26:46:99:1022,0,968 chr1 56755881 . A G 993.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.787;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=2.612;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.60;ReadPosRankSum=-0.746;SOR=1.143 GT:AD:DP:GQ:PL 0/1:20,26:46:99:1022,0,968 chr1 56758787 . G C 405.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.950;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.44;ReadPosRankSum=-1.252;SOR=0.793 GT:AD:DP:GQ:PL 0/1:44,19:63:99:434,0,1110 chr1 56765499 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 56767132 . T C 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.489;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.10;ReadPosRankSum=-0.489;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:173,0,101 chr1 56789227 . G A 265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.547;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.318;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.66;ReadPosRankSum=-0.210;SOR=0.184 GT:AD:DP:GQ:PL 0/1:10,11:21:99:294,0,320 chr1 56791995 . C A 103.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.273;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.92;ReadPosRankSum=1.401;SOR=0.260 GT:AD:DP:GQ:PL 0/1:10,5:15:99:132,0,373 chr1 56792144 . T C 1247.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.379;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=1.668;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.00;ReadPosRankSum=0.111;SOR=0.486 GT:AD:DP:GQ:PL 0/1:49,47:96:99:1276,0,1227 chr1 56793212 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 56875054 . C A 1235.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.672;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=8.966;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.190;SOR=1.473 GT:AD:DP:GQ:PL 0/1:64,49:113:99:1264,0,1686 chr1 56906918 . C T 690.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.491;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=1.298;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.10;ReadPosRankSum=0.424;SOR=0.471 GT:AD:DP:GQ:PL 0/1:25,24:49:99:719,0,724 chr1 56912137 . C T 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr1 56912476 . G A 2895.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.402;ClippingRankSum=0.000;DP=205;ExcessHet=3.0103;FS=1.705;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.13;ReadPosRankSum=-1.025;SOR=0.675 GT:AD:DP:GQ:PL 0/1:96,109:205:99:2924,0,2258 chr1 56912740 . T C 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=0.903;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:259,0,134 chr1 56929347 . A G 161.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.486;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.09;ReadPosRankSum=0.533;SOR=1.284 GT:AD:DP:GQ:PL 0/1:14,6:20:99:190,0,456 chr1 56929578 . T C 1281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.660;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=0.686;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.24;ReadPosRankSum=-1.935;SOR=0.765 GT:AD:DP:GQ:PL 0/1:58,56:114:99:1310,0,1626 chr1 56929748 . C G 288.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.521;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-0.651;SOR=0.527 GT:AD:DP:GQ:PL 0/1:12,10:22:99:317,0,435 chr1 56931628 . G A 90.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.951;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.67;ReadPosRankSum=1.709;SOR=1.051 GT:AD:DP:GQ:PL 0/1:12,4:16:99:119,0,418 chr1 56932065 . G C 109.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.869;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.44;ReadPosRankSum=-0.010;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,5:13:99:138,0,289 chr1 56943469 . G T 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr1 56956811 . C T 1764.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.661;ClippingRankSum=0.000;DP=192;ExcessHet=3.0103;FS=1.145;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.19;ReadPosRankSum=0.008;SOR=0.828 GT:AD:DP:GQ:PL 0/1:115,77:192:99:1793,0,3200 chr1 56959801 . A T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.842;SOR=0.859 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 57063099 . A G 788.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.51;SOR=2.737 GT:AD:DP:GQ:PL 1/1:0,22:22:66:817,66,0 chr1 57071389 . G A 253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.533;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=3.468;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=1.298;SOR=0.132 GT:AD:DP:GQ:PL 0/1:11,9:20:99:282,0,399 chr1 57136661 . G A 987.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.287;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.98;ReadPosRankSum=-1.045;SOR=0.752 GT:AD:DP:GQ:PL 0/1:57,42:99:99:1016,0,1458 chr1 57136710 . T C 662.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.304;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=2.052;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.21;ReadPosRankSum=-0.829;SOR=0.965 GT:AD:DP:GQ:PL 0/1:43,29:72:99:691,0,1157 chr1 57198689 . A C 61.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:89,9,0 chr1 57198740 . G A 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 57341223 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 57343568 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 57362808 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 57362823 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 57393417 . G T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.45;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 57393425 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 57401012 . C T 61.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:89,6,0 chr1 57423772 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 57438572 . C T 115.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.241;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.86;ReadPosRankSum=-0.262;SOR=0.941 GT:AD:DP:GQ:PL 0/1:4,5:9:99:144,0,106 chr1 57523751 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 57532243 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 57538337 . C T 31.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0 chr1 57560619 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 57562884 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 57595854 . C G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 57615052 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 57796257 . G T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 57916308 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 57917354 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 57997726 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 58000040 . A C 88.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:116,12,0 chr1 58048812 . T C 270.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.063;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.92;ReadPosRankSum=-0.357;SOR=0.534 GT:AD:DP:GQ:PL 0/1:6,10:16:99:299,0,129 chr1 58056748 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 58196581 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 58445368 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 58456544 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 58465276 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 58473324 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 58473663 . C T 198.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.14;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:227,18,0 chr1 58539307 . C T 2533.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.94;SOR=3.849 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2562,204,0 chr1 58630761 . T C 261.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.085;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=4.212;MLEAC=1;MLEAF=0.500;MQ=58.49;MQRankSum=-3.703;QD=8.44;ReadPosRankSum=-2.069;SOR=1.802 GT:AD:DP:GQ:PL 0/1:22,9:31:99:290,0,990 chr1 58630764 . C T 261.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.320;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=4.159;MLEAC=1;MLEAF=0.500;MQ=58.58;MQRankSum=-3.854;QD=7.93;ReadPosRankSum=-1.517;SOR=1.898 GT:AD:DP:GQ:PL 0/1:24,9:33:99:290,0,990 chr1 58630807 . G A 672.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.297;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.07;MQRankSum=-2.956;QD=13.46;ReadPosRankSum=0.260;SOR=0.622 GT:AD:DP:GQ:PL 0/1:31,19:50:99:701,0,1601 chr1 58630815 . T G 672.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.637;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.09;MQRankSum=-3.001;QD=13.19;ReadPosRankSum=0.664;SOR=0.580 GT:AD:DP:GQ:PL 0/1:32,19:51:99:701,0,1601 chr1 58630822 . T C 675.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.295;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.07;MQRankSum=-2.956;QD=13.52;ReadPosRankSum=0.544;SOR=0.622 GT:AD:DP:GQ:PL 0/1:31,19:50:99:704,0,1559 chr1 58630872 . A G 547.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.905;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.72;MQRankSum=-3.344;QD=8.56;ReadPosRankSum=1.624;SOR=0.737 GT:AD:DP:GQ:PL 0/1:38,26:64:99:576,0,1091 chr1 58630909 . T C 1038.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.262;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.91;MQRankSum=-4.072;QD=16.23;ReadPosRankSum=-0.692;SOR=0.593 GT:AD:DP:GQ:PL 0/1:36,28:64:99:1067,0,1419 chr1 58630910 . G A 1038.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.679;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.955;MLEAC=1;MLEAF=0.500;MQ=56.86;MQRankSum=-4.021;QD=16.49;ReadPosRankSum=-0.831;SOR=0.544 GT:AD:DP:GQ:PL 0/1:35,28:63:99:1067,0,1419 chr1 58630926 . C T 999.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.699;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=2.170;MLEAC=1;MLEAF=0.500;MQ=56.59;MQRankSum=-4.605;QD=16.95;ReadPosRankSum=-0.324;SOR=0.458 GT:AD:DP:GQ:PL 0/1:35,24:59:99:1028,0,1388 chr1 58630938 . T A 915.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.289;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.53;MQRankSum=-4.504;QD=15.26;ReadPosRankSum=-0.518;SOR=0.801 GT:AD:DP:GQ:PL 0/1:35,25:60:99:944,0,1394 chr1 58630958 . G A 954.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.653;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=7.153;MLEAC=1;MLEAF=0.500;MQ=56.47;MQRankSum=-4.447;QD=16.18;ReadPosRankSum=0.330;SOR=1.609 GT:AD:DP:GQ:PL 0/1:34,25:59:99:983,0,1433 chr1 58630969 . G C 1152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.818;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=8.510;MLEAC=1;MLEAF=0.500;MQ=56.90;MQRankSum=-4.183;QD=17.21;ReadPosRankSum=-0.353;SOR=1.216 GT:AD:DP:GQ:PL 0/1:37,30:67:99:1181,0,1586 chr1 58630980 . C A 1278.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.651;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=18.542;MLEAC=1;MLEAF=0.500;MQ=56.99;MQRankSum=-4.284;QD=18.53;ReadPosRankSum=-0.121;SOR=1.951 GT:AD:DP:GQ:PL 0/1:39,30:69:99:1307,0,1577 chr1 58630984 . A G 1200.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.849;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=13.011;MLEAC=1;MLEAF=0.500;MQ=57.03;MQRankSum=-4.160;QD=17.40;ReadPosRankSum=-0.495;SOR=1.785 GT:AD:DP:GQ:PL 0/1:38,31:69:99:1229,0,1499 chr1 58630997 . C G 1317.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.458;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=17.062;MLEAC=1;MLEAF=0.500;MQ=58.12;MQRankSum=-3.261;QD=18.05;ReadPosRankSum=0.166;SOR=1.936 GT:AD:DP:GQ:PL 0/1:40,33:73:99:1346,0,1616 chr1 58631017 . A G 1789.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.318;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=15.115;MLEAC=1;MLEAF=0.500;MQ=58.44;MQRankSum=-2.871;QD=20.34;ReadPosRankSum=-0.770;SOR=1.647 GT:AD:DP:GQ:PL 0/1:43,45:88:99:1818,0,1706 chr1 58631021 . G A 1819.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.373;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=8.842;MLEAC=1;MLEAF=0.500;MQ=58.45;MQRankSum=-2.713;QD=20.45;ReadPosRankSum=-1.428;SOR=1.543 GT:AD:DP:GQ:PL 0/1:41,48:89:99:1848,0,1568 chr1 58631181 . C T 922.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.384;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=17.122;MLEAC=1;MLEAF=0.500;MQ=59.16;MQRankSum=-2.825;QD=11.68;ReadPosRankSum=2.345;SOR=2.368 GT:AD:DP:GQ:PL 0/1:44,35:79:99:951,0,1140 chr1 58631255 . C A 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.917;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=8.625;MLEAC=1;MLEAF=0.500;MQ=57.21;MQRankSum=-4.322;QD=7.59;ReadPosRankSum=-1.761;SOR=2.973 GT:AD:DP:GQ:PL 0/1:18,7:25:99:218,0,521 chr1 58643652 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 58643661 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 58649989 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 58660944 . A G 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 58661004 . A C 572.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.75;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:601,48,0 chr1 58661414 . G A 1453.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.29;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1482,144,0 chr1 58661521 . C T 711.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.89;SOR=2.200 GT:AD:DP:GQ:PL 1/1:0,21:21:63:740,63,0 chr1 58665639 . G T 3586.77 PASS AC=2;AF=1.00;AN=2;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.21;SOR=2.259 GT:AD:DP:GQ:PL 1/1:0,108:108:99:3615,324,0 chr1 58685269 . G A 1024.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.14;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1053,102,0 chr1 58695063 . A G 339.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.31;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:35:368,35,0 chr1 58695213 . A G 1027.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.15;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1056,93,0 chr1 58696434 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 58696476 . T C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 58782321 . C T 1490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.434;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=0.773;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.76;ReadPosRankSum=1.196;SOR=0.549 GT:AD:DP:GQ:PL 0/1:44,57:101:99:1519,0,1299 chr1 58783141 . G C 5623.77 PASS AC=2;AF=1.00;AN=2;DP=167;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.68;SOR=2.205 GT:AD:DP:GQ:PL 1/1:0,167:167:99:5652,501,0 chr1 58783359 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 58799867 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 58803366 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 58881480 . C T 31.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.94;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:60,0,37 chr1 58990549 . A G 46.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:21:75,0,21 chr1 58999596 . G A 446.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.37;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,13:13:39:475,39,0 chr1 58999682 . G T 874.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:84:903,84,0 chr1 58999970 . G A 5420.77 PASS AC=2;AF=1.00;AN=2;DP=167;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.46;SOR=1.459 GT:AD:DP:GQ:PL 1/1:0,167:167:99:5449,501,0 chr1 59000053 . G A 6467.77 PASS AC=2;AF=1.00;AN=2;DP=193;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.86;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,191:191:99:6496,573,0 chr1 59000177 . G A 3646.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.73;SOR=1.871 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3675,315,0 chr1 59000209 . C G 2794.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.27;SOR=1.996 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2823,237,0 chr1 59000245 . G C 942.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.112;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.46;ReadPosRankSum=0.810;SOR=0.675 GT:AD:DP:GQ:PL 0/1:29,32:61:99:971,0,919 chr1 59000254 . A C 2406.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.18;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2435,175,0 chr1 59000520 . A G 1641.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.19;SOR=1.314 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1670,153,0 chr1 59000629 . G A 669.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.97;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:698,51,0 chr1 59000696 . C T 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr1 59053946 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 59163555 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 59163601 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 59189183 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 59321678 . T G 2982.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.305;ClippingRankSum=0.000;DP=182;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.48;ReadPosRankSum=-0.190;SOR=0.662 GT:AD:DP:GQ:PL 0/1:80,101:181:99:3011,0,2226 chr1 59327759 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 59378799 . G A 958.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.767;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=2.687;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.88;ReadPosRankSum=0.704;SOR=0.980 GT:AD:DP:GQ:PL 0/1:55,42:97:99:987,0,1310 chr1 59455908 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 59478469 . G T 31.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0 chr1 59689823 . G A 170.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.619;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.35;ReadPosRankSum=0.000;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,6:8:25:199,0,25 chr1 59689848 . A G 139.82 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.98;ReadPosRankSum=0.623;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,8:10:19:168,0,19 chr1 59689889 . A G 134.88 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.221;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=-0.282;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,8:9:16:163,0,16 chr1 59720008 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 59757660 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 59777510 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 59799245 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 59814779 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 59815290 . A G 913.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.58;SOR=3.014 GT:AD:DP:GQ:PL 1/1:0,25:25:75:942,75,0 chr1 59834148 . C G 1614.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.30;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1643,150,0 chr1 59836742 . C T 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-0.524;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr1 59837075 . C T 293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.32;ReadPosRankSum=0.665;SOR=0.693 GT:AD:DP:GQ:PL 0/1:9,9:18:99:322,0,321 chr1 59840132 . A C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 59840168 . G C 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.792;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 59848941 . A G 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=0.751;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,140 chr1 59848976 . A C 265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.61;ReadPosRankSum=-0.470;SOR=0.275 GT:AD:DP:GQ:PL 0/1:7,9:16:99:294,0,244 chr1 59849031 . T C 406.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.041;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=2.995;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.30;ReadPosRankSum=2.316;SOR=0.321 GT:AD:DP:GQ:PL 0/1:17,19:36:99:435,0,432 chr1 59862941 . T C 268.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.411;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.92;ReadPosRankSum=0.202;SOR=1.179 GT:AD:DP:GQ:PL 0/1:6,9:15:99:297,0,171 chr1 59896720 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 59907633 . A G 552.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.140;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.83;ReadPosRankSum=-1.477;SOR=0.892 GT:AD:DP:GQ:PL 0/1:14,17:31:99:581,0,480 chr1 59907994 . A C 1282.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.380;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.74;ReadPosRankSum=-1.340;SOR=0.784 GT:AD:DP:GQ:PL 0/1:44,43:87:99:1311,0,1243 chr1 59908103 . T C 503.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.49;SOR=2.049 GT:AD:DP:GQ:PL 1/1:0,16:16:48:532,48,0 chr1 59911461 . T G 113.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.25;ReadPosRankSum=-0.180;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:142,0,104 chr1 59915912 . C T 1468.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.258;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=3.444;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.57;ReadPosRankSum=-0.880;SOR=1.054 GT:AD:DP:GQ:PL 0/1:70,57:127:99:1497,0,1963 chr1 59926274 . G A 199.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.637;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.32;ReadPosRankSum=0.182;SOR=0.836 GT:AD:DP:GQ:PL 0/1:16,8:24:99:228,0,494 chr1 59926822 . C A 214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.629;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=3.757;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.30;ReadPosRankSum=0.953;SOR=0.105 GT:AD:DP:GQ:PL 0/1:11,8:19:99:243,0,394 chr1 59971252 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 59990734 . C A 1622.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.087;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=6.540;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.43;ReadPosRankSum=-0.759;SOR=0.341 GT:AD:DP:GQ:PL 0/1:69,73:142:99:1651,0,1919 chr1 60010258 . C G 836.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.87;SOR=2.925 GT:AD:DP:GQ:PL 1/1:0,24:24:72:865,72,0 chr1 60038090 . T C 2264.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.84;SOR=2.904 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2293,195,0 chr1 60039808 . G T 259.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.03;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:288,21,0 chr1 60039906 . A G 1626.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.09;SOR=2.511 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1655,138,0 chr1 60363413 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 60371042 . G C 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr1 60490550 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 60683414 . G T 58.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:86,9,0 chr1 60683681 . G T 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr1 60746897 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 60794771 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 60873043 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 60975648 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 60975650 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 61077220 . A G 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 61277488 . G A 1316.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.592;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=1.702;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.72;ReadPosRankSum=2.054;SOR=0.485 GT:AD:DP:GQ:PL 0/1:44,52:96:99:1345,0,1117 chr1 61352750 . A G 372.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.89;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:32:401,32,0 chr1 61355808 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 61600233 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 61654306 . C G 252.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.28;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:30:281,30,0 chr1 61688874 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 61694870 . A G 416.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.16;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:445,33,0 chr1 61729854 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 61729860 . G A 104.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:132,9,0 chr1 61742601 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 61766359 . C T 4073.77 PASS AC=2;AF=1.00;AN=2;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.83;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,128:128:99:4102,384,0 chr1 61766501 . T C 996.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.144;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.04;ReadPosRankSum=1.526;SOR=0.693 GT:AD:DP:GQ:PL 0/1:38,33:71:99:1025,0,1125 chr1 61791364 . A C 1347.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.806;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=0.732;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=-1.643;SOR=0.783 GT:AD:DP:GQ:PL 0/1:46,57:103:99:1376,0,1271 chr1 61791551 . A G 256.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.05;ReadPosRankSum=0.135;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,8:16:99:285,0,286 chr1 61795496 . A G 1949.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.038;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.60;ReadPosRankSum=-0.305;SOR=0.664 GT:AD:DP:GQ:PL 0/1:98,86:184:99:1978,0,2585 chr1 61797635 . G A 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=0.473;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:218,0,176 chr1 61808640 . G A 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=0.366;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr1 61827268 . T C 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.48;ReadPosRankSum=0.967;SOR=1.445 GT:AD:DP:GQ:PL 0/1:4,8:12:99:298,0,131 chr1 61864408 . T G 6390.77 PASS AC=2;AF=1.00;AN=2;DP=183;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.92;SOR=1.411 GT:AD:DP:GQ:PL 1/1:0,183:183:99:6419,549,0 chr1 61875054 . G A 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.93;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 61875183 . G C 1625.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.75;SOR=2.885 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1654,132,0 chr1 61875485 . T C 840.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.49;SOR=4.712 GT:AD:DP:GQ:PL 1/1:0,21:21:63:869,63,0 chr1 61899545 . C T 1490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.591;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=0.736;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.83;ReadPosRankSum=-0.717;SOR=0.569 GT:AD:DP:GQ:PL 0/1:71,55:126:99:1519,0,1921 chr1 61901206 . T G 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=-0.549;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,262 chr1 61908595 . T C 335.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.65;ReadPosRankSum=1.272;SOR=0.914 GT:AD:DP:GQ:PL 0/1:8,10:18:99:364,0,279 chr1 61914598 . C T 466.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.151;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.91;ReadPosRankSum=-0.290;SOR=0.732 GT:AD:DP:GQ:PL 0/1:35,24:59:99:495,0,767 chr1 61914626 . G A 404.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.994;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.147;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.64;ReadPosRankSum=-0.430;SOR=0.963 GT:AD:DP:GQ:PL 0/1:34,19:53:99:433,0,774 chr1 61927722 . A G 1799.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.946;ClippingRankSum=0.000;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.65;ReadPosRankSum=-1.231;SOR=0.682 GT:AD:DP:GQ:PL 0/1:92,77:169:99:1828,0,2526 chr1 61990072 . A T 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=-0.143;SOR=0.293 GT:AD:DP:GQ:PL 0/1:5,7:12:99:256,0,173 chr1 61990342 . G A 2184.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.102;ClippingRankSum=0.000;DP=250;ExcessHet=3.0103;FS=0.485;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.77;ReadPosRankSum=-1.025;SOR=0.633 GT:AD:DP:GQ:PL 0/1:154,95:249:99:2213,0,4268 chr1 61990376 . G A 1801.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.627;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.15;ReadPosRankSum=0.165;SOR=0.704 GT:AD:DP:GQ:PL 0/1:124,73:197:99:1830,0,3433 chr1 62017927 . G A 1212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.970;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.790;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.78;ReadPosRankSum=1.048;SOR=0.602 GT:AD:DP:GQ:PL 0/1:43,45:88:99:1241,0,1085 chr1 62017985 . C T 933.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.047;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=-0.320;SOR=0.610 GT:AD:DP:GQ:PL 0/1:33,37:70:99:962,0,835 chr1 62020849 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 62039043 . G C 196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.581;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.87;ReadPosRankSum=-1.390;SOR=1.048 GT:AD:DP:GQ:PL 0/1:17,8:25:99:225,0,465 chr1 62042658 . A T 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr1 62042659 . A T 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr1 62051011 . G C 5112.77 PASS AC=2;AF=1.00;AN=2;DP=158;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.77;SOR=1.079 GT:AD:DP:GQ:PL 1/1:0,156:156:99:5141,468,0 chr1 62079413 . C T 878.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.97;SOR=6.273 GT:AD:DP:GQ:PL 1/1:0,22:22:66:907,66,0 chr1 62096906 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 62100346 . T C 1543.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.373;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=2.886;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.03;ReadPosRankSum=0.992;SOR=1.058 GT:AD:DP:GQ:PL 0/1:56,54:110:99:1572,0,1519 chr1 62112221 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 62113765 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 62113791 . G A 176.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.47;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:205,15,0 chr1 62113851 . C T 848.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.58;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:877,63,0 chr1 62114000 . A C 4649.77 PASS AC=2;AF=1.00;AN=2;DP=130;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.78;SOR=2.009 GT:AD:DP:GQ:PL 1/1:0,129:129:99:4678,388,0 chr1 62114151 . G A 10950.77 PASS AC=2;AF=1.00;AN=2;DP=346;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.83;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,344:344:99:10979,1032,0 chr1 62128221 . T C 1753.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.20;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1782,132,0 chr1 62128921 . C T 10255.77 PASS AC=2;AF=1.00;AN=2;DP=323;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.75;SOR=0.699 GT:AD:DP:GQ:PL 1/1:0,323:323:99:10284,968,0 chr1 62129005 . T C 7503.77 PASS AC=2;AF=1.00;AN=2;DP=221;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.95;SOR=1.933 GT:AD:DP:GQ:PL 1/1:0,221:221:99:7532,663,0 chr1 62148423 . C T 1242.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.472;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=7.400;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.81;ReadPosRankSum=-0.202;SOR=1.378 GT:AD:DP:GQ:PL 0/1:64,51:115:99:1271,0,1634 chr1 62178446 . A G 511.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.860;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.05;ReadPosRankSum=1.019;SOR=0.402 GT:AD:DP:GQ:PL 0/1:17,17:34:99:540,0,574 chr1 62178500 . A G 358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.08;ReadPosRankSum=0.797;SOR=0.793 GT:AD:DP:GQ:PL 0/1:10,11:21:99:387,0,354 chr1 62184373 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 62184645 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 62189148 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 62191445 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 62192056 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 62195551 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 62195684 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 62195722 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 62206874 . G A 1948.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.60;SOR=1.278 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1977,173,0 chr1 62207365 . T C 2897.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.93;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2926,264,0 chr1 62207553 . G A 1324.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=1.923 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1353,117,0 chr1 62207615 . A C 305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.461;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.09;ReadPosRankSum=-1.162;SOR=0.527 GT:AD:DP:GQ:PL 0/1:8,11:19:99:334,0,243 chr1 62209589 . G A 924.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.90;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,32:32:95:953,95,0 chr1 62209947 . C T 2071.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.68;SOR=1.199 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2100,168,0 chr1 62210220 . A G 2108.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.47;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2137,189,0 chr1 62210612 . C T 460.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.912;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=4.291;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.24;ReadPosRankSum=-2.004;SOR=1.371 GT:AD:DP:GQ:PL 0/1:28,17:45:99:489,0,852 chr1 62210940 . A G 940.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.817;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=2.818;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.34;ReadPosRankSum=2.473;SOR=0.434 GT:AD:DP:GQ:PL 0/1:52,39:91:99:969,0,1485 chr1 62211376 . G T 2152.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.14;SOR=1.140 GT:AD:DP:GQ:PL 1/1:0,57:57:99:2181,171,0 chr1 62211378 . C T 576.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.995;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=1.022;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.94;ReadPosRankSum=1.380;SOR=0.520 GT:AD:DP:GQ:PL 0/1:32,26:58:99:605,0,851 chr1 62211446 . A G 326.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.017;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=1.736;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.54;ReadPosRankSum=0.464;SOR=0.296 GT:AD:DP:GQ:PL 0/1:17,14:31:99:355,0,499 chr1 62218992 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 62224139 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 62227859 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 62238462 . A G 1122.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.154;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.662;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.44;ReadPosRankSum=-0.157;SOR=0.625 GT:AD:DP:GQ:PL 0/1:82,51:133:99:1151,0,2227 chr1 62247552 . C G 6347.77 PASS AC=2;AF=1.00;AN=2;DP=194;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.89;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,193:193:99:6376,580,0 chr1 62247574 . G A 2587.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.993;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=3.233;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.20;ReadPosRankSum=2.161;SOR=0.802 GT:AD:DP:GQ:PL 0/1:98,98:196:99:2616,0,2558 chr1 62247797 . T C 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.736;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.29;ReadPosRankSum=-0.507;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,7:13:99:253,0,195 chr1 62262924 . T C 480.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.55;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:509,39,0 chr1 62262956 . C T 916.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.95;SOR=2.387 GT:AD:DP:GQ:PL 1/1:0,27:27:81:945,81,0 chr1 62263112 . A G 5267.77 PASS AC=2;AF=1.00;AN=2;DP=162;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.72;SOR=1.537 GT:AD:DP:GQ:PL 1/1:0,161:161:99:5296,483,0 chr1 62263166 . T C 8342.77 PASS AC=2;AF=1.00;AN=2;DP=194;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.99;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,194:194:99:8371,596,0 chr1 62263189 . T C 8481.77 PASS AC=2;AF=1.00;AN=2;DP=191;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.27;SOR=0.837 GT:AD:DP:GQ:PL 1/1:0,191:191:99:8510,596,0 chr1 62263246 . G A 6040.77 PASS AC=2;AF=1.00;AN=2;DP=181;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.37;SOR=1.351 GT:AD:DP:GQ:PL 1/1:0,181:181:99:6069,544,0 chr1 62263343 . G A 2750.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.25;SOR=2.272 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2779,231,0 chr1 62266498 . A T 385.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.84;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:414,33,0 chr1 62268267 . G A 2839.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.63;SOR=1.525 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2868,246,0 chr1 62271700 . A C 1120.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.85;SOR=5.353 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1149,87,0 chr1 62273232 . T C 2197.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.81;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2226,195,0 chr1 62273526 . G A 5321.77 PASS AC=2;AF=1.00;AN=2;DP=160;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=1.439 GT:AD:DP:GQ:PL 1/1:0,160:160:99:5350,481,0 chr1 62274393 . A G 12928.77 PASS AC=2;AF=1.00;AN=2;DP=398;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,398:398:99:12957,1193,0 chr1 62274774 . T C 5864.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.463;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.76;ReadPosRankSum=0.598;SOR=1.231 GT:AD:DP:GQ:PL 1/1:2,177:179:99:5893,488,0 chr1 62274777 . T C 8007.77 PASS AC=2;AF=1.00;AN=2;DP=180;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.35;SOR=1.172 GT:AD:DP:GQ:PL 1/1:0,180:180:99:8036,551,0 chr1 62275258 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 62311307 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 62337361 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 62379247 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 62402119 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 62457441 . G A 584.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.961;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.20;ReadPosRankSum=-1.010;SOR=0.247 GT:AD:DP:GQ:PL 0/1:16,18:34:99:613,0,494 chr1 62465961 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 62473963 . C T 1575.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.90;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1604,153,0 chr1 62477593 . C T 1780.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.25;SOR=2.393 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1809,156,0 chr1 62479747 . A G 259.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:288,24,0 chr1 62487512 . C T 817.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.18;SOR=4.003 GT:AD:DP:GQ:PL 1/1:0,23:23:69:846,69,0 chr1 62492526 . A G 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-0.366;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr1 62494579 . T C 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.14;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr1 62496257 . T C 545.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.39;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:574,42,0 chr1 62504513 . T C 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.00;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr1 62508124 . A G 696.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.74;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,19:19:57:725,57,0 chr1 62510801 . T G 598.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.63;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:627,45,0 chr1 62521952 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 62527949 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 62535218 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 62535449 . A C 2731.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.91;SOR=1.816 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2760,248,0 chr1 62545200 . T C 337.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.15;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:366,27,0 chr1 62560758 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 62647840 . C A 1085.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.02;SOR=1.885 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1114,105,0 chr1 62648018 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.83;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 62648048 . T C 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.58;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 62665217 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 62665320 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 62707434 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 62728920 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 62841289 . C T 186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.98;ReadPosRankSum=-0.998;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:215,0,176 chr1 62841632 . A G 299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=3.233;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.74;ReadPosRankSum=-1.229;SOR=0.105 GT:AD:DP:GQ:PL 0/1:7,9:16:99:328,0,244 chr1 62841713 . T C 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.69;ReadPosRankSum=0.967;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:59:59,0,68 chr1 62864217 . G A 330.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.432;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.41;ReadPosRankSum=0.282;SOR=0.412 GT:AD:DP:GQ:PL 0/1:7,12:19:99:359,0,165 chr1 62897254 . C T 88.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:116,12,0 chr1 63027288 . C A 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.11;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 63027493 . T G 135.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:163,12,0 chr1 63054233 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 63262487 . C T 166.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.85;ReadPosRankSum=1.133;SOR=0.223 GT:AD:DP:GQ:PL 0/1:4,4:8:99:195,0,305 chr1 63262488 . A G 166.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.085;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.53;ReadPosRankSum=0.475;SOR=0.368 GT:AD:DP:GQ:PL 0/1:4,5:9:99:195,0,305 chr1 63266996 . A G 70.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.15;ReadPosRankSum=-0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:68:99,0,68 chr1 63267172 . G A 31.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.97;ReadPosRankSum=0.619;SOR=1.445 GT:AD:DP:GQ:PL 0/1:6,2:8:60:60,0,158 chr1 63322827 . C A 163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.619;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.47;ReadPosRankSum=-0.135;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,6:8:59:192,0,59 chr1 63360082 . G A 196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=2.398;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.89;ReadPosRankSum=0.718;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,7:11:66:225,0,66 chr1 63370842 . C G 509.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.137;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=5.639;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.88;ReadPosRankSum=-0.384;SOR=2.613 GT:AD:DP:GQ:PL 0/1:11,16:27:99:538,0,277 chr1 63381099 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 63381176 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 63406087 . T C 343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.92;ReadPosRankSum=-0.393;SOR=1.473 GT:AD:DP:GQ:PL 0/1:5,10:15:99:372,0,164 chr1 63406210 . A G 1232.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.599;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=4.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.68;ReadPosRankSum=-0.798;SOR=1.249 GT:AD:DP:GQ:PL 0/1:37,47:84:99:1261,0,986 chr1 63406929 . T C 163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.619;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.47;ReadPosRankSum=-1.242;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,6:8:59:192,0,59 chr1 63407200 . A G 917.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.59;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,30:30:90:946,90,0 chr1 63411459 . G T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 63415881 . C T 904.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.27;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,32:32:96:933,96,0 chr1 63419551 . T G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.126;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 63441457 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 63446875 . G T 195.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.415;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=1.569;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.83;ReadPosRankSum=-0.088;SOR=1.085 GT:AD:DP:GQ:PL 0/1:15,10:25:99:233,0,403 chr1 63465625 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 63465628 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 63510159 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 63522813 . C T 464.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.10;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:493,36,0 chr1 63525469 . T C 513.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.58;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:542,39,0 chr1 63525596 . T C 753.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.659;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=3.250;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.92;ReadPosRankSum=-0.325;SOR=0.368 GT:AD:DP:GQ:PL 0/1:43,33:76:99:782,0,1261 chr1 63525819 . G A 157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.605;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.34;ReadPosRankSum=0.191;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:186,0,176 chr1 63531962 . A T 614.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.132;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.37;ReadPosRankSum=-0.093;SOR=0.836 GT:AD:DP:GQ:PL 0/1:19,21:40:99:643,0,501 chr1 63533416 . T C 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.760;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=-2.047;SOR=0.818 GT:AD:DP:GQ:PL 0/1:9,10:19:99:292,0,285 chr1 63534155 . C T 1167.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.241;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.98;ReadPosRankSum=-0.560;SOR=0.693 GT:AD:DP:GQ:PL 0/1:45,45:90:99:1196,0,1082 chr1 63534197 . T C 607.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.960;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.30;ReadPosRankSum=0.150;SOR=0.619 GT:AD:DP:GQ:PL 0/1:34,25:59:99:636,0,868 chr1 63534220 . T C 473.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.932;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.02;ReadPosRankSum=-1.389;SOR=0.518 GT:AD:DP:GQ:PL 0/1:23,20:43:99:502,0,649 chr1 63546658 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 63549546 . G A 2308.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.46;SOR=2.015 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2337,207,0 chr1 63551563 . G C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 63555425 . G A 1928.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.586;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=2.055;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.29;ReadPosRankSum=-0.752;SOR=0.531 GT:AD:DP:GQ:PL 0/1:79,78:157:99:1957,0,2048 chr1 63571167 . G A 435.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.237;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=2.555;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.22;ReadPosRankSum=0.654;SOR=1.098 GT:AD:DP:GQ:PL 0/1:34,19:53:99:464,0,937 chr1 63572436 . G T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.240;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.13;ReadPosRankSum=1.050;SOR=0.951 GT:AD:DP:GQ:PL 0/1:17,5:22:75:75,0,510 chr1 63593801 . C T 571.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.168;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=8.870;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.06;ReadPosRankSum=-1.958;SOR=0.052 GT:AD:DP:GQ:PL 0/1:12,18:30:99:600,0,411 chr1 63593973 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 63652067 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 63659873 . C T 838.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.274;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=1.455;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.12;ReadPosRankSum=0.832;SOR=0.462 GT:AD:DP:GQ:PL 0/1:22,27:49:99:867,0,654 chr1 63708106 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 63708129 . G T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 63723761 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 63727462 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 63727479 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 63731370 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 63742294 . T A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 63747791 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 63747801 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 63770042 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 63770056 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 63770136 . A C 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 63771758 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 63774569 . C T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.25;ReadPosRankSum=-0.712;SOR=0.527 GT:AD:DP:GQ:PL 0/1:2,5:7:63:107,0,63 chr1 63788855 . G A 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-1.579;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 63843422 . G A 784.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.087;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=6.248;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-1.074;SOR=1.625 GT:AD:DP:GQ:PL 0/1:21,27:48:99:813,0,597 chr1 63843594 . A C 368.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.140;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.03;ReadPosRankSum=-0.340;SOR=0.784 GT:AD:DP:GQ:PL 0/1:11,12:23:99:397,0,356 chr1 63843631 . A C 266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.52;ReadPosRankSum=-0.191;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,8:13:99:295,0,170 chr1 64009132 . C T 640.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.389;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.35;ReadPosRankSum=0.369;SOR=0.663 GT:AD:DP:GQ:PL 0/1:23,25:48:99:669,0,524 chr1 64038094 . A G 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 64038135 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 64049442 . T C 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.566;SOR=2.494 GT:AD:DP:GQ:PL 0/1:3,4:7:70:146,0,70 chr1 64049707 . C T 4214.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.99;SOR=1.788 GT:AD:DP:GQ:PL 1/1:0,124:124:99:4243,372,0 chr1 64142646 . G T 4224.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.888;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.75;ReadPosRankSum=1.749;SOR=0.705 GT:AD:DP:GQ:PL 1/1:1,128:129:99:4253,376,0 chr1 64157417 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 64158929 . G A 1584.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.45;SOR=2.737 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1613,138,0 chr1 64159159 . A G 1499.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.967;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=3.550;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.27;ReadPosRankSum=0.975;SOR=0.428 GT:AD:DP:GQ:PL 0/1:53,60:113:99:1528,0,1516 chr1 64177594 . C T 2417.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.618;ClippingRankSum=0.000;DP=187;ExcessHet=3.0103;FS=5.281;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.00;ReadPosRankSum=-2.035;SOR=1.102 GT:AD:DP:GQ:PL 0/1:93,93:186:99:2446,0,2389 chr1 64203884 . A T 1057.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.476;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=2.150;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.33;ReadPosRankSum=0.100;SOR=0.441 GT:AD:DP:GQ:PL 0/1:32,37:69:99:1086,0,960 chr1 64214971 . G A 294.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.355;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=2.858;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.42;ReadPosRankSum=0.499;SOR=2.303 GT:AD:DP:GQ:PL 0/1:6,10:16:99:323,0,202 chr1 64214999 . C G 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.304;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=3.358;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.29;ReadPosRankSum=0.437;SOR=2.093 GT:AD:DP:GQ:PL 0/1:6,7:13:99:253,0,177 chr1 64260731 . A C 281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.590;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.81;ReadPosRankSum=-1.693;SOR=0.616 GT:AD:DP:GQ:PL 0/1:19,13:32:99:310,0,461 chr1 64266898 . T A 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.272;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr1 64375056 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 64406037 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 64550666 . A T 3411.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.74;SOR=0.711 GT:AD:DP:GQ:PL 1/1:0,111:111:99:3440,333,0 chr1 64550716 . G A 1186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.181;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=2.561;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.41;ReadPosRankSum=1.940;SOR=0.471 GT:AD:DP:GQ:PL 0/1:59,45:104:99:1215,0,1473 chr1 64569567 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 64602955 . T C 3516.77 PASS AC=2;AF=1.00;AN=2;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.85;SOR=1.412 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3545,342,0 chr1 64616097 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 64629132 . A C 135.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:163,12,0 chr1 64632465 . T C 772.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.08;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,20:20:60:801,60,0 chr1 64634295 . G A 1940.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.46;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1969,174,0 chr1 64634378 . G T 310.75 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.52;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,8:8:24:348,24,0 chr1 64635068 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 64635079 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 64641689 . C T 1033.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.21;SOR=2.546 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1062,87,0 chr1 64642167 . T C 696.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.97;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,19:19:57:725,57,0 chr1 64647668 . T C 1350.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.75;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1379,102,0 chr1 64647885 . T C 10605.77 PASS AC=2;AF=1.00;AN=2;DP=335;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.66;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,335:335:99:10634,1005,0 chr1 64653463 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.25;ReadPosRankSum=0.180;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:72:72,0,146 chr1 64653714 . A G 601.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.969;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=4.969;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.60;ReadPosRankSum=-1.080;SOR=1.018 GT:AD:DP:GQ:PL 0/1:45,25:70:99:630,0,1209 chr1 64659016 . G T 198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.85;ReadPosRankSum=1.611;SOR=1.863 GT:AD:DP:GQ:PL 0/1:2,6:8:59:227,0,59 chr1 64663518 . A T 429.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.510;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.53;ReadPosRankSum=0.103;SOR=0.255 GT:AD:DP:GQ:PL 0/1:12,14:26:99:458,0,411 chr1 64664376 . A T 446.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.437;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.87;ReadPosRankSum=0.897;SOR=0.293 GT:AD:DP:GQ:PL 0/1:11,14:25:99:475,0,372 chr1 64671554 . T G 1714.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.374;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=0.705;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.83;ReadPosRankSum=-1.067;SOR=0.798 GT:AD:DP:GQ:PL 0/1:57,67:124:99:1743,0,1535 chr1 64678508 . G C 446.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.641;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=6.118;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=-0.790;SOR=2.093 GT:AD:DP:GQ:PL 0/1:20,15:35:99:475,0,582 chr1 64777783 . A G 2001.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.350;ClippingRankSum=0.000;DP=143;ExcessHet=3.0103;FS=2.993;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.00;ReadPosRankSum=-0.510;SOR=0.960 GT:AD:DP:GQ:PL 0/1:70,73:143:99:2030,0,1971 chr1 64838205 . T C 378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.500;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.94;ReadPosRankSum=1.327;SOR=1.179 GT:AD:DP:GQ:PL 0/1:8,12:20:99:407,0,240 chr1 64838867 . T C 82.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.82;ReadPosRankSum=-0.566;SOR=0.061 GT:AD:DP:GQ:PL 0/1:3,4:7:99:111,0,104 chr1 64955795 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 64960064 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 64960141 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 65018100 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 65265168 . C T 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.40;ReadPosRankSum=-0.712;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:66:66,0,188 chr1 65292353 . A G 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr1 65309504 . G C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 65311450 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.91;MQRankSum=-0.967;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:81:81,0,107 chr1 65311464 . A G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.12;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,178 chr1 65311472 . G C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.12;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,178 chr1 65311476 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.99;MQRankSum=-0.967;QD=16.59;ReadPosRankSum=0.431;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,1:3:78:78,0,178 chr1 65321602 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 65327945 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 65364614 . G T 382.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.017;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=3.222;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.31;ReadPosRankSum=0.069;SOR=0.088 GT:AD:DP:GQ:PL 0/1:14,11:25:99:420,0,691 chr1 65364616 . T G 391.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.629;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.67;ReadPosRankSum=0.533;SOR=0.465 GT:AD:DP:GQ:PL 0/1:14,11:25:99:420,0,765 chr1 65364925 . T C 1187.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.92;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1216,99,0 chr1 65370561 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 65379280 . A G 4403.77 PASS AC=2;AF=1.00;AN=2;DP=137;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.14;SOR=1.680 GT:AD:DP:GQ:PL 1/1:0,137:137:99:4432,411,0 chr1 65386627 . A G 594.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.30;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,19:19:57:623,57,0 chr1 65387187 . A G 985.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.86;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1014,90,0 chr1 65392405 . T C 2653.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.36;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2682,245,0 chr1 65392462 . G A 3942.77 PASS AC=2;AF=1.00;AN=2;DP=127;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.05;SOR=1.252 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3971,380,0 chr1 65395004 . A C 3102.77 PASS AC=2;AF=1.00;AN=2;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.34;SOR=1.202 GT:AD:DP:GQ:PL 1/1:0,99:99:99:3131,297,0 chr1 65401708 . C G 2614.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.28;SOR=1.416 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2643,243,0 chr1 65405379 . G T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 65405452 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 65406328 . A G 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.42;ReadPosRankSum=-2.100;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:95:95,0,243 chr1 65406336 . A G 217.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=31.11;ReadPosRankSum=0.792;SOR=2.584 GT:AD:DP:GQ:PL 0/1:1,6:7:24:246,0,24 chr1 65408464 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 65420715 . T C 969.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.312;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=1.759;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.02;ReadPosRankSum=1.129;SOR=0.512 GT:AD:DP:GQ:PL 0/1:48,40:88:99:998,0,1366 chr1 65420765 . T C 1235.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.749;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=7.521;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.44;ReadPosRankSum=1.287;SOR=0.381 GT:AD:DP:GQ:PL 0/1:61,47:108:99:1264,0,1643 chr1 65421330 . A C 1616.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.803;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=2.125;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.07;ReadPosRankSum=0.916;SOR=0.520 GT:AD:DP:GQ:PL 0/1:82,64:146:99:1645,0,2328 chr1 65431920 . C T 838.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.024;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.12;ReadPosRankSum=0.548;SOR=0.715 GT:AD:DP:GQ:PL 0/1:19,30:49:99:867,0,543 chr1 65550522 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 65550532 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 65558024 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 65558033 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 65570758 . A G 712.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.945;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=8.065;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.29;ReadPosRankSum=-0.398;SOR=1.817 GT:AD:DP:GQ:PL 0/1:32,26:58:99:741,0,809 chr1 65570818 . G T 930.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.24;SOR=3.098 GT:AD:DP:GQ:PL 1/1:0,26:26:78:959,78,0 chr1 65572301 . T G 140.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.487;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.03;ReadPosRankSum=0.240;SOR=0.512 GT:AD:DP:GQ:PL 0/1:18,10:28:99:169,0,368 chr1 65588108 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 65588114 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 65588121 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 65592830 . A G 1550.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.518;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.03;ReadPosRankSum=-0.137;SOR=0.698 GT:AD:DP:GQ:PL 0/1:65,54:119:99:1579,0,1810 chr1 65593762 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 65596642 . A G 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=-0.019;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,257 chr1 65605399 . T A 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=0.084;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,262 chr1 65610269 . G C 696.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.112;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=1.964;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.20;ReadPosRankSum=-1.183;SOR=0.973 GT:AD:DP:GQ:PL 0/1:55,30:85:99:725,0,1531 chr1 65619750 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 65619842 . T A 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=0.842;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,137 chr1 65619891 . T A 455.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.048;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.70;ReadPosRankSum=-1.378;SOR=0.793 GT:AD:DP:GQ:PL 0/1:7,14:21:99:484,0,161 chr1 65621618 . G C 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.875;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=0.084;SOR=1.112 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,225 chr1 65623018 . C A 610.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.880;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.46;ReadPosRankSum=1.180;SOR=0.818 GT:AD:DP:GQ:PL 0/1:25,24:49:99:639,0,624 chr1 65626334 . T A 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.75;ReadPosRankSum=-1.180;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:98:224,0,98 chr1 65629245 . A T 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.221;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=0.100;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:145,0,166 chr1 65633330 . C A 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.713;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.59;ReadPosRankSum=-0.211;SOR=0.163 GT:AD:DP:GQ:PL 0/1:18,7:25:99:218,0,644 chr1 65636574 . G A 1498.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.499;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=0.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=-1.071;SOR=0.533 GT:AD:DP:GQ:PL 0/1:54,54:108:99:1527,0,1575 chr1 65636934 . A G 790.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.703;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=1.919;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.64;ReadPosRankSum=0.601;SOR=1.030 GT:AD:DP:GQ:PL 0/1:51,31:82:99:819,0,1463 chr1 65652136 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 65652146 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 65664630 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 65696930 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 65696934 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 65696947 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 65696948 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 65865359 . T G 80.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0 chr1 66000167 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 66126098 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 66211798 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 66363016 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 66363579 . A G 2703.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.66;SOR=1.966 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2732,234,0 chr1 66365639 . T G 750.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.289;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=2.101;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.43;ReadPosRankSum=-1.285;SOR=0.422 GT:AD:DP:GQ:PL 0/1:40,32:72:99:779,0,1124 chr1 66365687 . G A 846.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.455;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.803;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.73;ReadPosRankSum=0.725;SOR=0.596 GT:AD:DP:GQ:PL 0/1:50,37:87:99:875,0,1312 chr1 66382553 . G T 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,115 chr1 66382609 . A G 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=8.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.792;SOR=2.788 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,112 chr1 66459125 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 66477360 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 66510762 . T A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-1.036;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 66510778 . G T 155.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.18;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:184,15,0 chr1 66532935 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 66532941 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 66534420 . A G 1593.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.336;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=0.729;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.23;ReadPosRankSum=0.161;SOR=0.575 GT:AD:DP:GQ:PL 0/1:46,66:112:99:1622,0,1181 chr1 66534479 . T G 1004.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.254;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=13.218;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.78;ReadPosRankSum=0.510;SOR=2.477 GT:AD:DP:GQ:PL 0/1:32,36:68:99:1033,0,823 chr1 66563311 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 66563316 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 66628488 . G A 1020.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.247;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.52;ReadPosRankSum=0.069;SOR=0.650 GT:AD:DP:GQ:PL 0/1:56,41:97:99:1049,0,1664 chr1 66628653 . G A 435.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.75;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:464,36,0 chr1 66636119 . A G 296.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.46;ReadPosRankSum=1.235;SOR=0.804 GT:AD:DP:GQ:PL 0/1:8,9:17:99:325,0,282 chr1 66643652 . A G 1092.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.416;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.781;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.38;ReadPosRankSum=0.377;SOR=0.587 GT:AD:DP:GQ:PL 0/1:51,45:96:99:1121,0,1229 chr1 66660431 . A G 2361.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.92;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2390,222,0 chr1 66667428 . T C 850.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.493;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.845;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.50;ReadPosRankSum=-0.073;SOR=0.878 GT:AD:DP:GQ:PL 0/1:44,37:81:99:879,0,1222 chr1 66676992 . T C 520.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.940;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.83;ReadPosRankSum=1.133;SOR=0.573 GT:AD:DP:GQ:PL 0/1:29,24:53:99:549,0,780 chr1 66679473 . T A 94.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0 chr1 66679639 . C A 1190.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.02;SOR=2.115 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1219,105,0 chr1 66682379 . A G 401.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.400;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=1.643;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.96;ReadPosRankSum=-1.670;SOR=1.292 GT:AD:DP:GQ:PL 0/1:16,15:31:99:430,0,383 chr1 66684023 . G C 1345.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.51;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1374,102,0 chr1 66688813 . T A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 66694653 . A G 1471.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.24;SOR=4.021 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1500,120,0 chr1 66695201 . A G 245.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.479;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.48;ReadPosRankSum=-0.825;SOR=2.303 GT:AD:DP:GQ:PL 0/1:3,9:12:61:274,0,61 chr1 66695298 . C T 865.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.705;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.61;ReadPosRankSum=3.498;SOR=0.941 GT:AD:DP:GQ:PL 0/1:12,30:42:99:894,0,240 chr1 66739644 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 66776517 . G A 382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.594;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=1.079;SOR=0.896 GT:AD:DP:GQ:PL 0/1:21,14:35:99:411,0,636 chr1 66777341 . C A 1862.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.113;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.50;ReadPosRankSum=0.476;SOR=0.651 GT:AD:DP:GQ:PL 0/1:84,78:162:99:1891,0,2058 chr1 66777569 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:32:75,0,32 chr1 66801073 . T A 990.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.239;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.26;ReadPosRankSum=1.169;SOR=0.741 GT:AD:DP:GQ:PL 0/1:66,41:107:99:1019,0,1873 chr1 66814198 . C A 291.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.761;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=-0.080;SOR=0.976 GT:AD:DP:GQ:PL 0/1:10,12:22:99:320,0,223 chr1 66822362 . C T 341.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.865;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.563;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.76;ReadPosRankSum=0.343;SOR=0.368 GT:AD:DP:GQ:PL 0/1:22,13:35:99:370,0,639 chr1 66822546 . C A 385.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.526;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=9.170;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.30;ReadPosRankSum=0.034;SOR=3.116 GT:AD:DP:GQ:PL 0/1:17,12:29:99:414,0,487 chr1 66826795 . T A 1673.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.665;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=3.174;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.93;ReadPosRankSum=-0.018;SOR=0.409 GT:AD:DP:GQ:PL 0/1:39,45:84:99:1702,0,2553 chr1 66828012 . C T 255.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.181;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.12;ReadPosRankSum=-0.361;SOR=0.784 GT:AD:DP:GQ:PL 0/1:13,10:23:99:284,0,394 chr1 66837620 . A G 504.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.464;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.04;ReadPosRankSum=-1.292;SOR=0.446 GT:AD:DP:GQ:PL 0/1:4,17:21:99:533,0,104 chr1 66862211 . A G 770.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.471;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=4.613;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=-1.084;SOR=0.770 GT:AD:DP:GQ:PL 0/1:37,34:71:99:799,0,845 chr1 66893512 . T A 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.765;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=0.687;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,128 chr1 66913601 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 66918956 . T G 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-0.328;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 66924733 . G C 6501.77 PASS AC=2;AF=1.00;AN=2;DP=204;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.87;SOR=0.979 GT:AD:DP:GQ:PL 1/1:0,204:204:99:6530,612,0 chr1 66924785 . C G 4617.77 PASS AC=2;AF=1.00;AN=2;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.98;SOR=1.488 GT:AD:DP:GQ:PL 1/1:0,132:132:99:4646,396,0 chr1 66925316 . G C 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.20;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr1 66925320 . G C 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.59;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr1 66930539 . T G 438.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.31;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,12:12:36:467,36,0 chr1 66958805 . A G 899.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.064;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=8.410;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.56;ReadPosRankSum=-0.166;SOR=0.067 GT:AD:DP:GQ:PL 0/1:18,28:46:99:928,0,613 chr1 66959628 . T G 461.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.78;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,15:15:45:490,45,0 chr1 66964420 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 66970763 . A G 294.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.450;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.74;ReadPosRankSum=-0.699;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,10:20:99:323,0,311 chr1 67008294 . A G 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.084;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 67009197 . T C 251.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.728;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=1.545;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.68;ReadPosRankSum=-0.730;SOR=0.402 GT:AD:DP:GQ:PL 0/1:11,15:26:99:280,0,244 chr1 67021426 . T C 888.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.480;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.07;ReadPosRankSum=-0.306;SOR=0.693 GT:AD:DP:GQ:PL 0/1:37,31:68:99:917,0,1468 chr1 67021436 . C A 1316.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.034;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.896;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.46;ReadPosRankSum=-1.187;SOR=0.518 GT:AD:DP:GQ:PL 0/1:33,47:80:99:1345,0,1215 chr1 67042051 . T A 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-1.068;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 67042384 . A G 1194.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.355;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=1.958;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.06;ReadPosRankSum=-0.448;SOR=0.458 GT:AD:DP:GQ:PL 0/1:37,48:85:99:1223,0,1026 chr1 67047220 . G T 62.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.519;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.24;ReadPosRankSum=0.840;SOR=1.091 GT:AD:DP:GQ:PL 0/1:23,5:28:91:91,0,672 chr1 67047237 . A C 99.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.395;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.12;ReadPosRankSum=-0.869;SOR=0.869 GT:AD:DP:GQ:PL 0/1:25,7:32:99:128,0,744 chr1 67050633 . T A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.842;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 67053650 . C G 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=-0.015;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,224 chr1 67053739 . G A 586.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.118;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=0.817;SOR=0.960 GT:AD:DP:GQ:PL 0/1:23,21:44:99:615,0,753 chr1 67093056 . C T 1858.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.80;SOR=1.487 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1887,165,0 chr1 67095214 . A G 1582.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.66;SOR=1.958 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1611,150,0 chr1 67095273 . C T 2287.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.60;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2316,239,0 chr1 67095568 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:32:72,0,32 chr1 67096423 . G T 236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.417;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.78;ReadPosRankSum=0.417;SOR=0.818 GT:AD:DP:GQ:PL 0/1:7,8:15:99:265,0,235 chr1 67103141 . G T 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.53;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 67111684 . A T 898.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.99;SOR=1.255 GT:AD:DP:GQ:PL 1/1:0,29:29:87:927,87,0 chr1 67113562 . G A 143.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.98;ReadPosRankSum=-0.264;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:172,0,256 chr1 67113703 . A G 1656.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.12;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1685,165,0 chr1 67125664 . A G 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=1.242;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,140 chr1 67125977 . G A 193.84 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.31;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:222,18,0 chr1 67135449 . G T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 67168129 . G T 715.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.488;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.84;ReadPosRankSum=-1.881;SOR=0.659 GT:AD:DP:GQ:PL 0/1:47,34:81:99:744,0,1278 chr1 67169792 . C T 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.000;SOR=3.258 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 67182777 . T C 1163.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.92;SOR=3.477 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1192,93,0 chr1 67219433 . C T 221.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.96;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:250,18,0 chr1 67219704 . T C 2989.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.20;SOR=0.985 GT:AD:DP:GQ:PL 1/1:0,99:99:99:3018,295,0 chr1 67219760 . G A 1978.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.92;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2007,192,0 chr1 67226083 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 67226089 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 67239891 . C T 356.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.282;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=1.723;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.89;ReadPosRankSum=0.181;SOR=1.112 GT:AD:DP:GQ:PL 0/1:17,13:30:99:385,0,518 chr1 67240043 . A G 2184.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.21;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2213,210,0 chr1 67279984 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 67307966 . T C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 67329636 . T C 5336.77 PASS AC=2;AF=1.00;AN=2;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.58;SOR=0.705 GT:AD:DP:GQ:PL 1/1:0,169:169:99:5365,506,0 chr1 67350032 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 67386458 . A G 397.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.068;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.94;ReadPosRankSum=0.098;SOR=0.754 GT:AD:DP:GQ:PL 0/1:25,15:40:99:426,0,787 chr1 67386652 . G A 2302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.763;ClippingRankSum=0.000;DP=198;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.69;ReadPosRankSum=-0.428;SOR=0.714 GT:AD:DP:GQ:PL 0/1:99,98:197:99:2331,0,2691 chr1 67386927 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.25;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 67390338 . A G 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.812;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=0.921;SOR=1.022 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,189 chr1 67395837 . C A 2800.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.830;ClippingRankSum=0.000;DP=236;ExcessHet=3.0103;FS=6.385;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.87;ReadPosRankSum=0.408;SOR=1.067 GT:AD:DP:GQ:PL 0/1:132,104:236:99:2829,0,3891 chr1 67424843 . A G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 67426528 . A G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.38;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 67481342 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 67482430 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 67497773 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 67497774 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 67547070 . T C 171.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.224;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.21;ReadPosRankSum=0.820;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,9:13:68:200,0,68 chr1 67547154 . T C 131.81 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.83;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:20:160,20,0 chr1 67547192 . T C 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=1.645;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:51:76,0,51 chr1 67555658 . G C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,519 chr1 67555663 . G A 68.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.75;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:97:97,0,516 chr1 67555664 . T C 68.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.46;ReadPosRankSum=-1.150;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:97:97,0,516 chr1 67555790 . G A 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,4:8:75:109,0,75 chr1 67575479 . T G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 67660413 . C A 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr1 67660754 . G A 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 67673635 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 67686297 . T G 3419.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=1.847 GT:AD:DP:GQ:PL 1/1:0,94:94:99:3448,283,0 chr1 67686680 . G A 394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.16;ReadPosRankSum=-2.028;SOR=0.776 GT:AD:DP:GQ:PL 0/1:11,12:23:99:423,0,390 chr1 67686705 . T C 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.62;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr1 67686755 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 67707581 . C T 3103.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.295;ClippingRankSum=0.000;DP=256;ExcessHet=3.0103;FS=5.924;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=-0.585;SOR=1.041 GT:AD:DP:GQ:PL 0/1:132,124:256:99:3132,0,3424 chr1 67707853 . C G 85.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.25;ReadPosRankSum=0.652;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:114,0,104 chr1 67712544 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 67793719 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 67969717 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 68020540 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 68127448 . C G 1221.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.63;SOR=6.869 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1250,90,0 chr1 68137749 . C T 649.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.780;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=4.653;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.50;ReadPosRankSum=-0.395;SOR=0.241 GT:AD:DP:GQ:PL 0/1:27,25:52:99:678,0,854 chr1 68137903 . C T 1013.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.813;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=7.114;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.39;ReadPosRankSum=0.809;SOR=0.269 GT:AD:DP:GQ:PL 0/1:50,39:89:99:1042,0,1425 chr1 68138048 . A G 498.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.086;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=3.010;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.75;ReadPosRankSum=0.800;SOR=1.981 GT:AD:DP:GQ:PL 0/1:6,15:21:99:527,0,151 chr1 68145634 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 68148330 . A G 2011.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.19;SOR=1.159 GT:AD:DP:GQ:PL 1/1:0,55:55:99:2040,165,0 chr1 68153828 . G A 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.55;ReadPosRankSum=-0.777;SOR=0.693 GT:AD:DP:GQ:PL 0/1:7,7:14:99:218,0,251 chr1 68155079 . G A 748.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.645;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=4.641;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.93;ReadPosRankSum=-1.663;SOR=0.256 GT:AD:DP:GQ:PL 0/1:19,28:47:99:777,0,516 chr1 68159195 . C T 1966.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.226;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=3.855;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.61;ReadPosRankSum=1.038;SOR=1.048 GT:AD:DP:GQ:PL 0/1:82,74:156:99:1995,0,2137 chr1 68161885 . C A 440.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.681;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.79;ReadPosRankSum=0.244;SOR=0.807 GT:AD:DP:GQ:PL 0/1:24,21:45:99:469,0,595 chr1 68162009 . G T 898.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.13;SOR=3.352 GT:AD:DP:GQ:PL 1/1:0,23:23:69:927,69,0 chr1 68162518 . C T 2664.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.11;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2693,249,0 chr1 68168237 . T C 40.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:68,6,0 chr1 68168241 . G A 40.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:68,6,0 chr1 68231567 . C T 142.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.28;ReadPosRankSum=0.405;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,6:10:99:171,0,137 chr1 68276222 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 68282762 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 68285967 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 68286020 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.11;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 68286021 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.74;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 68414642 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 68414644 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 68430961 . G A 682.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.042;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.76;ReadPosRankSum=-1.276;SOR=1.609 GT:AD:DP:GQ:PL 0/1:10,20:30:99:711,0,315 chr1 68439675 . G C 1972.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.35;SOR=1.437 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2001,194,0 chr1 68483456 . T C 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.791;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.91;ReadPosRankSum=0.791;SOR=0.188 GT:AD:DP:GQ:PL 0/1:10,4:14:99:125,0,364 chr1 68748287 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 68754642 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 68760878 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 68961458 . G A 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 68961517 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 69330706 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 69339428 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 69734806 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 69760149 . G A 988.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.574;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=3.058;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.95;ReadPosRankSum=0.327;SOR=0.341 GT:AD:DP:GQ:PL 0/1:28,34:62:99:1017,0,879 chr1 69760240 . G A 1650.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.108;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.23;ReadPosRankSum=-1.227;SOR=0.706 GT:AD:DP:GQ:PL 0/1:70,65:135:99:1679,0,1871 chr1 69760442 . T C 890.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=-0.687;SOR=0.624 GT:AD:DP:GQ:PL 0/1:35,33:68:99:919,0,1003 chr1 69760530 . C A 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,167 chr1 70121677 . C T 1270.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.71;SOR=2.432 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1299,108,0 chr1 70143555 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=38.30;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:90,6,0 chr1 70143563 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 70143570 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 70143574 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 70143582 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 70143583 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 70143630 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 70143649 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 70143659 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 70143671 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 70145664 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 70187385 . A T 406.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.493;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.320;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.62;ReadPosRankSum=-0.879;SOR=0.437 GT:AD:DP:GQ:PL 0/1:18,17:35:99:435,0,442 chr1 70290878 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 70315013 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 70393714 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 70393742 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 70416230 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 70418157 . A G 689.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.52;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,18:18:54:718,54,0 chr1 70421416 . A G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 70427708 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 70428194 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 70434941 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=38.26;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 70439117 . G T 1201.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.322;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.66;ReadPosRankSum=0.665;SOR=0.726 GT:AD:DP:GQ:PL 0/1:41,47:88:99:1230,0,1028 chr1 70487599 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 70537116 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 70631207 . T C 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 70631227 . A G 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 70784669 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 70852578 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.03;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 70862551 . A G 703.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.94;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:732,54,0 chr1 70865537 . G A 287.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=2.359;SOR=0.527 GT:AD:DP:GQ:PL 0/1:11,9:20:99:316,0,392 chr1 70865747 . G A 1680.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.485;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=7.298;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.14;ReadPosRankSum=-0.232;SOR=1.015 GT:AD:DP:GQ:PL 0/1:50,61:111:99:1709,0,1385 chr1 70865815 . A G 3301.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.69;SOR=1.298 GT:AD:DP:GQ:PL 1/1:0,98:98:99:3330,294,0 chr1 70869187 . C T 1102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.416;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=0.789;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.61;ReadPosRankSum=0.324;SOR=0.601 GT:AD:DP:GQ:PL 0/1:53,42:95:99:1131,0,1405 chr1 70953816 . C T 139.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.323;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.74;ReadPosRankSum=-0.356;SOR=0.527 GT:AD:DP:GQ:PL 0/1:10,6:16:99:168,0,299 chr1 70974534 . C T 184.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.736;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=0.643;SOR=1.179 GT:AD:DP:GQ:PL 0/1:8,7:15:99:213,0,211 chr1 70998865 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 71388932 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 71434819 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 71527473 . G T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 71527511 . T C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.92;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 71592684 . C T 293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.011;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=2.291;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.77;ReadPosRankSum=-0.736;SOR=0.269 GT:AD:DP:GQ:PL 0/1:12,11:23:99:322,0,398 chr1 71592722 . T C 508.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.513;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=5.338;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.78;ReadPosRankSum=2.520;SOR=1.670 GT:AD:DP:GQ:PL 0/1:33,19:52:99:537,0,938 chr1 71592860 . A T 1751.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.096;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=1.336;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.60;ReadPosRankSum=0.638;SOR=0.844 GT:AD:DP:GQ:PL 0/1:70,69:139:99:1780,0,2712 chr1 71592869 . G A 1828.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.025;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=1.326;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.25;ReadPosRankSum=-0.302;SOR=0.640 GT:AD:DP:GQ:PL 0/1:67,71:138:99:1857,0,2597 chr1 71593092 . G A 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=-0.389;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:218,0,176 chr1 71663197 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 71732521 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 71732524 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 71776356 . G A 171.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.857;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.21;ReadPosRankSum=0.640;SOR=1.609 GT:AD:DP:GQ:PL 0/1:7,6:13:99:200,0,219 chr1 71783840 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.50;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 72120525 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 72120526 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 72274951 . G A 232.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.392;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.93;ReadPosRankSum=-0.205;SOR=1.022 GT:AD:DP:GQ:PL 0/1:8,10:18:99:261,0,244 chr1 72275051 . C G 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=0.000;SOR=1.022 GT:AD:DP:GQ:PL 0/1:3,4:7:99:112,0,104 chr1 72282161 . C T 492.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.254;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=3.992;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.95;ReadPosRankSum=-0.099;SOR=1.545 GT:AD:DP:GQ:PL 0/1:29,16:45:99:521,0,905 chr1 72302656 . T C 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 72362093 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 72388697 . T A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 72594653 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 72749292 . C A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 73020253 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 73065132 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 73065141 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 73104937 . A G 59.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.384;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.98;ReadPosRankSum=0.000;SOR=0.330 GT:AD:DP:GQ:PL 0/1:11,4:15:88:88,0,342 chr1 73105655 . C T 297.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.09;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:27:326,27,0 chr1 73146908 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 73192378 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 73447116 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 73607135 . C A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 73624731 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 73624739 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 73625274 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 73770595 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 73783548 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 73826846 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 73827179 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 73904392 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 74017690 . G A 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr1 74027085 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 74042027 . T G 189.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.64;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:218,18,0 chr1 74109498 . C T 959.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.96;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,31:31:93:988,93,0 chr1 74180830 . C T 571.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.08;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,16:16:48:600,48,0 chr1 74198025 . G A 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr1 74198130 . C G 923.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.99;ReadPosRankSum=0.664;SOR=0.384 GT:AD:DP:GQ:PL 0/1:18,26:44:99:952,0,618 chr1 74198465 . T C 2781.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.221;ClippingRankSum=0.000;DP=222;ExcessHet=3.0103;FS=0.548;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.53;ReadPosRankSum=0.731;SOR=0.776 GT:AD:DP:GQ:PL 0/1:120,102:222:99:2810,0,3254 chr1 74199809 . G A 2026.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.734;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=8.446;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.96;ReadPosRankSum=-0.888;SOR=0.291 GT:AD:DP:GQ:PL 0/1:49,78:127:99:2055,0,1278 chr1 74200823 . T C 358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.771;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.34;ReadPosRankSum=-0.035;SOR=0.724 GT:AD:DP:GQ:PL 0/1:25,18:43:99:387,0,643 chr1 74201149 . A G 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr1 74204289 . T G 440.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.98;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:469,36,0 chr1 74204488 . A G 1243.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.154;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.785;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.52;ReadPosRankSum=-1.019;SOR=0.589 GT:AD:DP:GQ:PL 0/1:44,48:92:99:1272,0,1210 chr1 74205835 . A G 198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.85;ReadPosRankSum=-0.319;SOR=1.863 GT:AD:DP:GQ:PL 0/1:2,6:8:59:227,0,59 chr1 74235611 . T A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.02;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 74247867 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 74254711 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 74271590 . C T 838.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.519;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=7.836;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=0.317;SOR=1.755 GT:AD:DP:GQ:PL 0/1:44,28:72:99:867,0,1281 chr1 74271913 . A G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.674;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 74353393 . T G 4542.77 PASS AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.90;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,147:147:99:4571,441,0 chr1 74370520 . C T 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.619;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.85;ReadPosRankSum=0.619;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,2:8:59:59,0,188 chr1 74375489 . A C 2253.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.67;SOR=2.730 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2282,195,0 chr1 74435974 . A G 377.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.79;ReadPosRankSum=-0.425;SOR=0.186 GT:AD:DP:GQ:PL 0/1:30,13:43:99:406,0,1120 chr1 74452811 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 74470690 . A G 1461.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.57;SOR=1.493 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1490,114,0 chr1 74470770 . G C 1471.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.71;SOR=1.414 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1500,135,0 chr1 74472065 . A G 3179.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.48;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,101:101:99:3208,303,0 chr1 74475526 . C T 4659.77 PASS AC=2;AF=1.00;AN=2;DP=142;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.05;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,141:141:99:4688,423,0 chr1 74475609 . G A 5522.77 PASS AC=2;AF=1.00;AN=2;DP=178;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.03;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,178:178:99:5551,531,0 chr1 74483056 . C T 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.93;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 74540092 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 74540343 . A G 680.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.335;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=8.290;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.02;ReadPosRankSum=0.537;SOR=2.256 GT:AD:DP:GQ:PL 0/1:19,21:40:99:709,0,469 chr1 74540392 . G A 914.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.67;SOR=2.468 GT:AD:DP:GQ:PL 1/1:0,28:28:84:943,84,0 chr1 74559254 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 74571099 . T C 3549.77 PASS AC=2;AF=1.00;AN=2;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.18;SOR=1.502 GT:AD:DP:GQ:PL 1/1:0,107:107:99:3578,321,0 chr1 74571128 . C T 4221.77 PASS AC=2;AF=1.00;AN=2;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.51;SOR=1.196 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4250,402,0 chr1 74599757 . C T 541.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.367;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.60;ReadPosRankSum=0.625;SOR=0.745 GT:AD:DP:GQ:PL 0/1:40,23:63:99:570,0,1007 chr1 74606580 . G T 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=0.000;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,154 chr1 74620728 . G C 444.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.448;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=1.458;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.12;ReadPosRankSum=1.451;SOR=1.055 GT:AD:DP:GQ:PL 0/1:25,15:40:99:473,0,688 chr1 74620981 . T C 152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.97;ReadPosRankSum=-1.085;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:181,0,140 chr1 74631742 . G C 1191.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.891;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.814;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.24;ReadPosRankSum=-0.476;SOR=0.882 GT:AD:DP:GQ:PL 0/1:38,52:90:99:1220,0,874 chr1 74643179 . A C 909.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=1.942 GT:AD:DP:GQ:PL 1/1:0,29:29:87:938,87,0 chr1 74706067 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 74706317 . T A 896.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.113;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=1.028;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.01;ReadPosRankSum=2.428;SOR=0.546 GT:AD:DP:GQ:PL 0/1:29,35:64:99:925,0,795 chr1 74724768 . C T 649.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.559;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=3.840;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.03;ReadPosRankSum=-0.270;SOR=0.734 GT:AD:DP:GQ:PL 0/1:29,25:54:99:678,0,708 chr1 74732661 . G A 46.88 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.63;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:16:75,0,16 chr1 74733079 . A C 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.18;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr1 74733468 . C T 5586.77 PASS AC=2;AF=1.00;AN=2;DP=164;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.07;SOR=1.668 GT:AD:DP:GQ:PL 1/1:0,164:164:99:5615,492,0 chr1 74733615 . C G 637.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.029;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=5.158;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.18;ReadPosRankSum=-1.776;SOR=0.223 GT:AD:DP:GQ:PL 0/1:19,23:42:99:666,0,537 chr1 74738459 . G A 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-1.006;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 74748706 . G C 802.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.772;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=2.197;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.38;ReadPosRankSum=-0.237;SOR=1.049 GT:AD:DP:GQ:PL 0/1:26,34:60:99:831,0,550 chr1 74759941 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 74939578 . C T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 75034479 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 75034484 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 75137370 . A G 4150.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.30;SOR=1.387 GT:AD:DP:GQ:PL 1/1:0,121:121:99:4179,363,0 chr1 75143364 . A C 610.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.833;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.20;ReadPosRankSum=-0.363;SOR=0.735 GT:AD:DP:GQ:PL 0/1:19,24:43:99:639,0,531 chr1 75156931 . C T 1078.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.713;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.40;ReadPosRankSum=0.509;SOR=0.643 GT:AD:DP:GQ:PL 0/1:43,44:87:99:1107,0,1134 chr1 75160735 . A T 922.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.96;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,28:28:84:951,84,0 chr1 75206691 . A G 1238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.972;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.91;ReadPosRankSum=-0.595;SOR=0.627 GT:AD:DP:GQ:PL 0/1:53,51:104:99:1267,0,1249 chr1 75214748 . G A 633.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.468;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.945;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.46;ReadPosRankSum=-0.664;SOR=0.863 GT:AD:DP:GQ:PL 0/1:38,29:67:99:662,0,1068 chr1 75214860 . T G 664.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.24;SOR=2.531 GT:AD:DP:GQ:PL 1/1:0,20:20:60:693,60,0 chr1 75214880 . G A 453.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.41;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:482,42,0 chr1 75215666 . A T 920.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.49;SOR=6.358 GT:AD:DP:GQ:PL 1/1:0,23:23:69:949,69,0 chr1 75215826 . T C 3747.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.47;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3776,368,0 chr1 75217660 . T C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 75218844 . A G 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.67;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 75219718 . T C 1170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.296;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.900;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.30;ReadPosRankSum=-0.574;SOR=0.551 GT:AD:DP:GQ:PL 0/1:43,45:88:99:1199,0,1184 chr1 75219958 . T C 322.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.453;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.45;ReadPosRankSum=-1.105;SOR=0.904 GT:AD:DP:GQ:PL 0/1:13,11:24:99:351,0,368 chr1 75233961 . T C 406.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.004;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.814;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.71;ReadPosRankSum=0.000;SOR=1.329 GT:AD:DP:GQ:PL 0/1:17,15:32:99:435,0,466 chr1 75234086 . A G 651.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.796;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=5.003;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.73;ReadPosRankSum=-1.118;SOR=1.146 GT:AD:DP:GQ:PL 0/1:41,26:67:99:680,0,1119 chr1 75234146 . G A 394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.739;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.81;ReadPosRankSum=-0.208;SOR=0.536 GT:AD:DP:GQ:PL 0/1:38,20:58:99:423,0,1021 chr1 75234247 . G A 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.56;ReadPosRankSum=-0.349;SOR=0.269 GT:AD:DP:GQ:PL 0/1:8,4:12:99:131,0,298 chr1 75236989 . G A 400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.167;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=1.685;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.70;ReadPosRankSum=0.225;SOR=0.346 GT:AD:DP:GQ:PL 0/1:10,14:24:99:429,0,265 chr1 75241725 . C T 202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.508;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=3.757;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.67;ReadPosRankSum=0.983;SOR=0.105 GT:AD:DP:GQ:PL 0/1:11,8:19:99:231,0,390 chr1 75241967 . C T 1221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.789;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.817;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=-0.383;SOR=0.530 GT:AD:DP:GQ:PL 0/1:44,44:88:99:1250,0,1307 chr1 75242844 . A T 843.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.762;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.92;ReadPosRankSum=-1.353;SOR=0.640 GT:AD:DP:GQ:PL 0/1:22,31:53:99:872,0,618 chr1 75244224 . C A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 75251240 . C T 1539.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.981;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=6.880;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.55;ReadPosRankSum=1.025;SOR=1.367 GT:AD:DP:GQ:PL 0/1:42,57:99:99:1568,0,1156 chr1 75275160 . A G 591.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.095;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.96;ReadPosRankSum=-0.321;SOR=0.616 GT:AD:DP:GQ:PL 0/1:32,22:54:99:620,0,970 chr1 75357195 . C T 352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.114;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=0.977;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.15;ReadPosRankSum=2.491;SOR=0.884 GT:AD:DP:GQ:PL 0/1:62,23:85:99:381,0,1650 chr1 75357399 . C T 783.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.08;SOR=2.400 GT:AD:DP:GQ:PL 1/1:0,23:23:69:812,69,0 chr1 75396841 . C A 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.19;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 75402551 . G T 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.875;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=0.875;SOR=1.112 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,225 chr1 75456060 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 75456062 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 75521785 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 75541413 . C T 628.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.011;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=4.058;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.09;ReadPosRankSum=-0.423;SOR=0.261 GT:AD:DP:GQ:PL 0/1:26,26:52:99:657,0,657 chr1 75582225 . G A 330.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.445;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.164;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.89;ReadPosRankSum=-1.176;SOR=0.941 GT:AD:DP:GQ:PL 0/1:32,16:48:99:359,0,988 chr1 75582387 . A C 125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.86;ReadPosRankSum=-0.330;SOR=0.307 GT:AD:DP:GQ:PL 0/1:10,6:16:99:154,0,336 chr1 75616184 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr1 75616205 . G T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.674;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,113 chr1 75641621 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 75641654 . A G 128.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.46;ReadPosRankSum=-0.431;SOR=1.872 GT:AD:DP:GQ:PL 0/1:1,5:6:24:157,0,24 chr1 75641788 . C G 210.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.047;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.05;ReadPosRankSum=0.492;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,10:14:57:239,0,57 chr1 75657031 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 75657039 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 75659526 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 75677758 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 75677773 . T C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.385;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,106 chr1 75716827 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.85;ReadPosRankSum=1.068;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:75:75,0,75 chr1 75724884 . C G 260.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.583;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.67;ReadPosRankSum=0.453;SOR=0.339 GT:AD:DP:GQ:PL 0/1:23,11:34:99:289,0,754 chr1 75728369 . C G 615.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.689;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=1.310;SOR=0.880 GT:AD:DP:GQ:PL 0/1:25,25:50:99:644,0,689 chr1 75728621 . A G 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=0.269;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:259,0,134 chr1 75732751 . T C 1273.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.410;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=2.841;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.55;ReadPosRankSum=0.815;SOR=0.402 GT:AD:DP:GQ:PL 0/1:47,47:94:99:1302,0,1425 chr1 75733100 . G A 1531.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.616;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=0.733;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.93;ReadPosRankSum=-1.112;SOR=0.589 GT:AD:DP:GQ:PL 0/1:48,62:110:99:1560,0,1254 chr1 75733660 . C G 1501.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.903;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.726;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=-1.475;SOR=0.599 GT:AD:DP:GQ:PL 0/1:59,58:117:99:1530,0,1615 chr1 75739958 . C A 806.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.267;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=4.411;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.58;ReadPosRankSum=0.203;SOR=0.346 GT:AD:DP:GQ:PL 0/1:60,34:94:99:835,0,1711 chr1 75744069 . G A 850.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.589;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=2.240;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.67;ReadPosRankSum=-0.323;SOR=1.041 GT:AD:DP:GQ:PL 0/1:23,35:58:99:879,0,548 chr1 75744107 . T C 872.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.577;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.945;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.22;ReadPosRankSum=-0.183;SOR=0.806 GT:AD:DP:GQ:PL 0/1:29,37:66:99:901,0,756 chr1 75744250 . T C 448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.918;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.348;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.82;ReadPosRankSum=0.802;SOR=1.038 GT:AD:DP:GQ:PL 0/1:17,18:35:99:477,0,388 chr1 75744604 . C T 226.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.735;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=1.871;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.34;ReadPosRankSum=-0.547;SOR=1.609 GT:AD:DP:GQ:PL 0/1:10,10:20:99:255,0,324 chr1 75744792 . C T 154.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.097;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.07;ReadPosRankSum=0.976;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,6:11:99:183,0,175 chr1 75750645 . T C 301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.039;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.86;ReadPosRankSum=0.249;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,10:16:99:330,0,202 chr1 75761337 . A G 1177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.434;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.843;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.40;ReadPosRankSum=-1.365;SOR=0.824 GT:AD:DP:GQ:PL 0/1:52,43:95:99:1206,0,1478 chr1 75769201 . A G 589.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.130;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=2.254;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.83;ReadPosRankSum=1.599;SOR=1.031 GT:AD:DP:GQ:PL 0/1:34,26:60:99:618,0,956 chr1 75786061 . T C 344.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.853;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=4.210;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.89;ReadPosRankSum=1.111;SOR=0.080 GT:AD:DP:GQ:PL 0/1:18,11:29:99:373,0,632 chr1 75786326 . G A 4285.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.226;ClippingRankSum=0.000;DP=374;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.52;ReadPosRankSum=-0.353;SOR=0.707 GT:AD:DP:GQ:PL 0/1:197,175:372:99:4314,0,5058 chr1 75786650 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 75787002 . T C 170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.951;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.884;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.05;ReadPosRankSum=0.000;SOR=1.688 GT:AD:DP:GQ:PL 0/1:11,6:17:99:199,0,328 chr1 75789543 . G A 280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.547;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=2.933;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.55;ReadPosRankSum=1.211;SOR=0.132 GT:AD:DP:GQ:PL 0/1:5,11:16:99:309,0,149 chr1 75792207 . A T 1347.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.083;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.82;ReadPosRankSum=-0.224;SOR=0.725 GT:AD:DP:GQ:PL 0/1:59,55:114:99:1376,0,1495 chr1 75792414 . C T 802.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.520;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=1.078;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.16;ReadPosRankSum=0.494;SOR=0.968 GT:AD:DP:GQ:PL 0/1:31,30:61:99:831,0,823 chr1 75795152 . C T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 75803687 . T C 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.55;ReadPosRankSum=-0.677;SOR=0.693 GT:AD:DP:GQ:PL 0/1:7,7:14:99:218,0,251 chr1 75810668 . T C 386.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.244;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.92;ReadPosRankSum=-0.499;SOR=0.515 GT:AD:DP:GQ:PL 0/1:23,16:39:99:415,0,661 chr1 75814753 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 75814858 . A G 100.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.578;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=0.731;SOR=0.527 GT:AD:DP:GQ:PL 0/1:7,6:13:99:129,0,186 chr1 75833185 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 75842728 . G A 176.90 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.66;ReadPosRankSum=-0.140;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,8:9:15:205,0,15 chr1 75843342 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 75848189 . C T 382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.804;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.18;ReadPosRankSum=-0.055;SOR=0.712 GT:AD:DP:GQ:PL 0/1:12,15:27:99:411,0,283 chr1 75867478 . T G 501.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.117;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.19;ReadPosRankSum=-0.949;SOR=0.596 GT:AD:DP:GQ:PL 0/1:12,19:31:99:530,0,447 chr1 75867487 . T C 262.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.381;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.21;ReadPosRankSum=1.049;SOR=0.937 GT:AD:DP:GQ:PL 0/1:20,12:32:99:291,0,784 chr1 75874438 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 75877173 . T G 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr1 75878326 . C A 965.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.873;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=1.072;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.09;ReadPosRankSum=0.154;SOR=0.976 GT:AD:DP:GQ:PL 0/1:29,35:64:99:994,0,730 chr1 75879026 . A T 865.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.211;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.37;ReadPosRankSum=-0.223;SOR=0.576 GT:AD:DP:GQ:PL 0/1:38,32:70:99:894,0,1070 chr1 75879171 . T C 743.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.399;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=5.087;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.77;ReadPosRankSum=-1.858;SOR=0.195 GT:AD:DP:GQ:PL 0/1:24,30:54:99:772,0,736 chr1 75879235 . G A 639.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.52;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:668,48,0 chr1 75881147 . T C 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.414;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr1 75890963 . G A 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=0.464;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,135 chr1 75899388 . C G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 75922063 . T A 419.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.449;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=4.781;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.12;ReadPosRankSum=-0.317;SOR=1.954 GT:AD:DP:GQ:PL 0/1:15,17:32:99:457,0,419 chr1 75932287 . C T 751.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.117;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.988;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.53;ReadPosRankSum=-0.351;SOR=0.876 GT:AD:DP:GQ:PL 0/1:32,28:60:99:780,0,996 chr1 75980238 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 75989370 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 75989390 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 76143006 . G T 895.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.813;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=10.754;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.98;ReadPosRankSum=-0.291;SOR=1.897 GT:AD:DP:GQ:PL 0/1:37,32:69:99:924,0,963 chr1 76143092 . C T 397.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.919;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=1.974;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.30;ReadPosRankSum=0.823;SOR=1.387 GT:AD:DP:GQ:PL 0/1:12,14:26:99:426,0,321 chr1 76152308 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 76205412 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 76247873 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 76268395 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 76305790 . G T 2123.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.71;SOR=1.926 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2152,189,0 chr1 76305810 . G C 1222.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.040;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.48;ReadPosRankSum=1.704;SOR=0.730 GT:AD:DP:GQ:PL 0/1:34,45:79:99:1251,0,878 chr1 76314192 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 76322535 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 76379097 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 76412471 . C T 700.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.37;SOR=2.636 GT:AD:DP:GQ:PL 1/1:0,21:21:63:729,63,0 chr1 76576720 . G A 407.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.005;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.10;ReadPosRankSum=-0.039;SOR=0.765 GT:AD:DP:GQ:PL 0/1:13,14:27:99:436,0,462 chr1 76627325 . C T 950.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.52;SOR=6.273 GT:AD:DP:GQ:PL 1/1:0,22:22:66:979,66,0 chr1 76627326 . T G 950.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.60;SOR=6.273 GT:AD:DP:GQ:PL 1/1:0,22:22:66:979,66,0 chr1 76627495 . C A 3378.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.13;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3407,306,0 chr1 76628557 . G A 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-0.241;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr1 76629141 . A G 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=0.380;SOR=0.495 GT:AD:DP:GQ:PL 0/1:9,7:16:99:244,0,327 chr1 76691862 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 76699621 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 76699817 . G T 1851.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.86;SOR=1.160 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1880,180,0 chr1 76700150 . G C 4438.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.284;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.20;ReadPosRankSum=1.401;SOR=0.707 GT:AD:DP:GQ:PL 1/1:2,145:147:99:4467,351,0 chr1 76700455 . A G 1090.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.937;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=2.108;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.48;ReadPosRankSum=-0.471;SOR=1.051 GT:AD:DP:GQ:PL 0/1:57,38:95:99:1119,0,1723 chr1 76700988 . A T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.655;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.42;ReadPosRankSum=2.655;SOR=1.609 GT:AD:DP:GQ:PL 0/1:5,4:9:99:104,0,139 chr1 76701025 . A T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 76867974 . G A 185.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.48;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:214,0,214 chr1 76959474 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 76990883 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 77020918 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 77020931 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 77020932 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 77021807 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 77161411 . G A 2159.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.52;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2188,183,0 chr1 77166585 . T C 418.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.10;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:447,33,0 chr1 77169263 . G A 1643.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.55;SOR=1.755 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1672,147,0 chr1 77195490 . T C 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 77270668 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 77297386 . A G 1429.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.77;SOR=1.414 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1458,135,0 chr1 77310571 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 77310683 . A G 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr1 77314151 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 77370146 . A G 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 77424522 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 77462263 . A G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 77486471 . A G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 77487775 . C T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 77523734 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 77523737 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 77536196 . T C 1106.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.95;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1135,84,0 chr1 77536262 . A G 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.221;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=0.355;SOR=1.911 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,145 chr1 77558599 . T C 344.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.496;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=1.377;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.14;ReadPosRankSum=1.582;SOR=1.061 GT:AD:DP:GQ:PL 0/1:21,13:34:99:373,0,570 chr1 77566309 . A G 449.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.226;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.74;ReadPosRankSum=0.685;SOR=0.340 GT:AD:DP:GQ:PL 0/1:10,14:24:99:478,0,321 chr1 77579684 . G A 511.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.825;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=1.624;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.05;ReadPosRankSum=-1.087;SOR=1.385 GT:AD:DP:GQ:PL 0/1:17,17:34:99:540,0,440 chr1 77580945 . G A 535.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.537;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=5.389;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.40;ReadPosRankSum=-0.071;SOR=1.126 GT:AD:DP:GQ:PL 0/1:31,26:57:99:564,0,920 chr1 77632718 . T C 822.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.418;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.66;ReadPosRankSum=-0.705;SOR=0.614 GT:AD:DP:GQ:PL 0/1:58,37:95:99:851,0,1494 chr1 77713291 . T A 925.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.208;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.23;ReadPosRankSum=-0.889;SOR=0.610 GT:AD:DP:GQ:PL 0/1:33,37:70:99:954,0,881 chr1 77718640 . A G 372.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.558;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.475;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=-0.450;SOR=0.382 GT:AD:DP:GQ:PL 0/1:14,18:32:99:401,0,355 chr1 77734320 . T C 262.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.799;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.94;ReadPosRankSum=-0.447;SOR=0.375 GT:AD:DP:GQ:PL 0/1:11,11:22:99:291,0,325 chr1 77736060 . G T 902.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.425;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=2.688;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.12;ReadPosRankSum=-0.035;SOR=1.012 GT:AD:DP:GQ:PL 0/1:60,39:99:99:931,0,1654 chr1 77736204 . T A 310.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.198;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.95;ReadPosRankSum=-0.031;SOR=1.061 GT:AD:DP:GQ:PL 0/1:16,10:26:99:339,0,555 chr1 77740997 . A C 479.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.134;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.13;ReadPosRankSum=-1.108;SOR=0.859 GT:AD:DP:GQ:PL 0/1:13,15:28:99:508,0,391 chr1 77774432 . T C 528.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.237;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=3.159;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.59;ReadPosRankSum=0.057;SOR=0.270 GT:AD:DP:GQ:PL 0/1:24,18:42:99:557,0,842 chr1 77811910 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 77815317 . T C 733.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.780;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.31;ReadPosRankSum=-0.737;SOR=0.481 GT:AD:DP:GQ:PL 0/1:14,24:38:99:762,0,422 chr1 77847103 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 77847809 . G A 489.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.98;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,14:14:42:518,42,0 chr1 77848395 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 77848578 . G A 524.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.98;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,15:15:45:553,45,0 chr1 77915367 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 77917782 . G A 647.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:51:676,51,0 chr1 77933522 . C G 673.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.63;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,22:22:66:702,66,0 chr1 78012991 . G A 2235.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.93;SOR=2.376 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2264,192,0 chr1 78015827 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 78015956 . G A 1608.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.97;SOR=2.737 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1637,138,0 chr1 78031012 . C T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 78077147 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 78081019 . G A 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr1 78112493 . T C 2393.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.822;ClippingRankSum=0.000;DP=195;ExcessHet=3.0103;FS=0.528;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.28;ReadPosRankSum=0.511;SOR=0.777 GT:AD:DP:GQ:PL 0/1:105,90:195:99:2422,0,2692 chr1 78119402 . T C 1279.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.391;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=1.677;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.67;ReadPosRankSum=1.287;SOR=0.954 GT:AD:DP:GQ:PL 0/1:48,53:101:99:1308,0,1294 chr1 78268976 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 78310322 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 78367912 . G A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:66:66,0,66 chr1 78400298 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 78497752 . G A 253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.159;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.15;ReadPosRankSum=-0.591;SOR=0.425 GT:AD:DP:GQ:PL 0/1:14,11:25:99:282,0,414 chr1 78628133 . A G 1275.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.38;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1304,125,0 chr1 78628396 . T A 237.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:266,24,0 chr1 78628908 . A G 1669.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.82;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1698,168,0 chr1 78629654 . A C 1417.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=2.780 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1446,126,0 chr1 78629896 . T C 2674.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2703,255,0 chr1 78641214 . T C 1431.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.54;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1460,132,0 chr1 78725640 . C G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 78725700 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.40;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 78749001 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 78749170 . A G 246.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.590;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.963;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.63;ReadPosRankSum=0.248;SOR=0.148 GT:AD:DP:GQ:PL 0/1:4,10:14:99:275,0,125 chr1 78749179 . G C 688.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,15:15:48:717,48,0 chr1 78749184 . A G 688.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=2.049 GT:AD:DP:GQ:PL 1/1:0,16:16:48:717,48,0 chr1 78749540 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 78750231 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 78750582 . G C 752.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.88;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:81:781,81,0 chr1 78872750 . T G 112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.522;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.05;ReadPosRankSum=0.132;SOR=0.804 GT:AD:DP:GQ:PL 0/1:8,6:14:99:141,0,175 chr1 78889911 . A G 379.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.165;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.26;ReadPosRankSum=-1.191;SOR=1.179 GT:AD:DP:GQ:PL 0/1:9,13:22:99:408,0,259 chr1 78892969 . G A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.385;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 78917773 . A T 1065.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.31;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1094,96,0 chr1 78920122 . T C 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-0.022;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr1 78926677 . G A 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 78926725 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.49;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 78926743 . T C 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 78926761 . C T 241.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.493;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.18;ReadPosRankSum=1.701;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,8:10:53:270,0,53 chr1 78927071 . C A 1478.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.61;SOR=2.007 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1507,132,0 chr1 78936242 . A G 444.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.21;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,13:13:39:473,39,0 chr1 78937650 . T C 138.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:166,12,0 chr1 78937765 . T C 856.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.537;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=6.824;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.03;ReadPosRankSum=0.814;SOR=0.188 GT:AD:DP:GQ:PL 0/1:24,33:57:99:885,0,734 chr1 78938066 . T G 2552.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.13;SOR=1.151 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2581,245,0 chr1 78939094 . T A 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=0.566;SOR=0.446 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,112 chr1 78946203 . T C 295.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.783;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=4.925;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.83;ReadPosRankSum=0.599;SOR=0.138 GT:AD:DP:GQ:PL 0/1:13,12:25:99:324,0,434 chr1 78946233 . A G 351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.144;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=1.617;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.35;ReadPosRankSum=0.213;SOR=0.350 GT:AD:DP:GQ:PL 0/1:20,14:34:99:380,0,597 chr1 78946266 . G A 550.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.240;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.227;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=0.907;SOR=0.922 GT:AD:DP:GQ:PL 0/1:19,22:41:99:579,0,500 chr1 79006456 . C A 1097.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.31;SOR=2.448 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1126,96,0 chr1 79055264 . G A 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 79055847 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 79113234 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 79201813 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 79391453 . T A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 79517124 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 79606620 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 79621973 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 79736034 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 79828818 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 79864608 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 79872874 . C G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 80061173 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 80061178 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 80206556 . T C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.92;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 80206558 . A G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.94;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 80320648 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 80451193 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 80467739 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 80495871 . A G 191.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.501;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.18;ReadPosRankSum=0.241;SOR=2.584 GT:AD:DP:GQ:PL 0/1:4,6:10:99:220,0,103 chr1 80496000 . G A 921.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.002;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=1.027;MLEAC=1;MLEAF=0.500;MQ=59.82;MQRankSum=0.000;QD=14.87;ReadPosRankSum=0.107;SOR=0.892 GT:AD:DP:GQ:PL 0/1:29,33:62:99:950,0,749 chr1 80496194 . A C 1527.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.95;SOR=1.559 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1556,135,0 chr1 80496335 . T C 341.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.37;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:370,27,0 chr1 81128036 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 81221568 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.65;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:90,6,0 chr1 81221571 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 81221587 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 81255531 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 81255556 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 81300718 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.16;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 81312308 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 81338904 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 81338906 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 81374324 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 81377044 . T G 74.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:102,9,0 chr1 81418479 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 81418605 . A T 86.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:114,9,0 chr1 81427141 . C T 461.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.78;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,15:15:45:490,45,0 chr1 81427167 . A G 283.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.658;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.74;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,8:16:99:312,0,301 chr1 81427172 . C G 283.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.908;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.74;ReadPosRankSum=-0.273;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,8:16:99:312,0,301 chr1 81427300 . T C 148.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:177,15,0 chr1 81427611 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 81480946 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 81480947 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 81502277 . T C 7615.77 PASS AC=2;AF=1.00;AN=2;DP=237;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.70;QD=32.13;SOR=1.346 GT:AD:DP:GQ:PL 1/1:0,237:237:99:7644,711,0 chr1 81502302 . T C 8355.77 PASS AC=2;AF=1.00;AN=2;DP=266;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.13;QD=31.41;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,266:266:99:8384,798,0 chr1 81502558 . G A 1047.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.206;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.793;MLEAC=1;MLEAF=0.500;MQ=57.73;MQRankSum=1.327;QD=11.27;ReadPosRankSum=0.574;SOR=0.809 GT:AD:DP:GQ:PL 0/1:50,43:93:99:1076,0,1417 chr1 81502835 . A G 556.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.26;QD=29.30;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:57:585,57,0 chr1 81505037 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 81606896 . A T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 81625292 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 81713049 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 81780707 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 81835417 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 81950130 . T C 837.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.91;SOR=2.925 GT:AD:DP:GQ:PL 1/1:0,24:24:72:866,72,0 chr1 81950536 . G A 1252.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.14;SOR=3.675 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1281,102,0 chr1 81951868 . T G 1102.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.95;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1131,84,0 chr1 81955912 . C T 2585.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.32;SOR=1.165 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2614,240,0 chr1 81970597 . G A 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=0.751;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,140 chr1 81971998 . G A 211.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.53;ReadPosRankSum=-0.732;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,6:9:99:240,0,391 chr1 81984369 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 82046129 . C T 104.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:132,9,0 chr1 82046168 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 82046525 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 82589555 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 82648675 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 83009534 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 83009708 . A G 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 83051952 . G T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 83355972 . G C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.18;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 83358927 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 83358946 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 83372005 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.70;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 83399269 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.24;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 83629424 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 83889735 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 83901943 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 83917396 . G A 1429.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.49;SOR=2.200 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1458,132,0 chr1 83917808 . T C 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-0.489;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr1 83998785 . C G 355.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.07;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:30:384,30,0 chr1 84086053 . G A 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.660;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=1.423;SOR=0.446 GT:AD:DP:GQ:PL 0/1:12,12:24:99:259,0,327 chr1 84130407 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 84130430 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 84134830 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 84175008 . T G 511.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.10;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:51:540,51,0 chr1 84175151 . T G 250.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.360;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.90;ReadPosRankSum=-0.230;SOR=0.368 GT:AD:DP:GQ:PL 0/1:2,10:12:48:279,0,48 chr1 84235568 . T C 1194.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.14;SOR=2.115 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1223,105,0 chr1 84274849 . T G 88.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:116,12,0 chr1 84274929 . T C 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr1 84294535 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 84298792 . C G 449.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.161;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.74;ReadPosRankSum=2.526;SOR=0.340 GT:AD:DP:GQ:PL 0/1:10,14:24:99:478,0,345 chr1 84325556 . T C 696.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.18;SOR=2.636 GT:AD:DP:GQ:PL 1/1:0,21:21:63:725,63,0 chr1 84344662 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 84344713 . A C 559.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.99;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,16:16:48:588,48,0 chr1 84345132 . A G 2728.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.73;SOR=1.192 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2757,258,0 chr1 84388599 . C T 365.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:394,30,0 chr1 84398573 . G C 893.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.921;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=3.246;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=0.618;SOR=1.023 GT:AD:DP:GQ:PL 0/1:33,36:69:99:922,0,954 chr1 84401927 . G A 721.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.138;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=4.256;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.89;ReadPosRankSum=-0.041;SOR=1.530 GT:AD:DP:GQ:PL 0/1:28,28:56:99:750,0,763 chr1 84408152 . A G 462.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.117;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=9.467;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.51;ReadPosRankSum=-0.512;SOR=2.584 GT:AD:DP:GQ:PL 0/1:21,16:37:99:491,0,623 chr1 84408559 . C G 1029.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.164;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=0.927;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.55;ReadPosRankSum=0.600;SOR=0.551 GT:AD:DP:GQ:PL 0/1:37,39:76:99:1058,0,1076 chr1 84411048 . T G 606.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.164;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=12.030;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.40;ReadPosRankSum=-0.279;SOR=0.023 GT:AD:DP:GQ:PL 0/1:15,22:37:99:635,0,511 chr1 84412697 . A G 605.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.65;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,18:18:54:634,54,0 chr1 84414697 . T C 1497.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.198;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.02;ReadPosRankSum=-0.431;SOR=0.714 GT:AD:DP:GQ:PL 0/1:32,56:88:99:1526,0,834 chr1 84479306 . A G 6213.77 PASS AC=2;AF=1.00;AN=2;DP=176;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.39;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,176:176:99:6242,528,0 chr1 84481062 . C T 833.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.75;SOR=2.226 GT:AD:DP:GQ:PL 1/1:0,29:29:86:862,86,0 chr1 84622619 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 84622623 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 84622629 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 84647520 . T C 1397.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.77;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1426,132,0 chr1 84647546 . A G 1126.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.19;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1155,105,0 chr1 84650169 . G T 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr1 84650470 . C T 1458.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.843;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=2.321;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=-0.790;SOR=0.950 GT:AD:DP:GQ:PL 0/1:62,59:121:99:1487,0,1499 chr1 84655414 . A G 453.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.892;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.94;ReadPosRankSum=-0.791;SOR=0.635 GT:AD:DP:GQ:PL 0/1:18,20:38:99:482,0,466 chr1 84655572 . A G 1514.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.13;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1543,156,0 chr1 84658030 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 84658136 . A G 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.57;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 84659453 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 84662579 . A G 2486.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.70;SOR=1.339 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2515,243,0 chr1 84662597 . T C 2101.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.36;SOR=2.056 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2130,189,0 chr1 84662622 . G C 1656.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.73;SOR=3.865 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1685,135,0 chr1 84662726 . T A 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.69;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 84666299 . T G 301.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:330,27,0 chr1 84688018 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 84726053 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 84801956 . G A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,72 chr1 84926641 . C T 1140.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.837;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=3.248;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.05;ReadPosRankSum=-1.319;SOR=0.463 GT:AD:DP:GQ:PL 0/1:74,52:126:99:1169,0,1907 chr1 84931603 . G C 921.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.153;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=1.145;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.89;ReadPosRankSum=-0.664;SOR=0.961 GT:AD:DP:GQ:PL 0/1:23,35:58:99:950,0,581 chr1 84952096 . G A 521.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.94;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:550,42,0 chr1 84952624 . C G 1010.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.544;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=4.699;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.55;ReadPosRankSum=1.274;SOR=1.616 GT:AD:DP:GQ:PL 0/1:33,32:65:99:1039,0,1043 chr1 84956378 . C T 1700.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.405;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=6.191;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.81;ReadPosRankSum=-0.978;SOR=0.369 GT:AD:DP:GQ:PL 0/1:77,67:144:99:1729,0,2022 chr1 84956695 . T C 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.69;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:59:59,0,72 chr1 84958499 . A G 480.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.953;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=5.870;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=0.507;SOR=2.066 GT:AD:DP:GQ:PL 0/1:23,15:38:99:509,0,636 chr1 84958796 . A G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.253;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,96 chr1 84989993 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 84996511 . G C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.524;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 84996899 . C G 775.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.375;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=3.719;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.21;ReadPosRankSum=-0.066;SOR=0.223 GT:AD:DP:GQ:PL 0/1:24,27:51:99:804,0,815 chr1 84996969 . G T 451.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.10;ReadPosRankSum=1.503;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,12:18:99:480,0,248 chr1 84996982 . T G 418.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.17;ReadPosRankSum=1.195;SOR=1.765 GT:AD:DP:GQ:PL 0/1:5,11:16:99:447,0,174 chr1 84997067 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 85021837 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 85022347 . G A 3345.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.80;SOR=1.157 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3374,306,0 chr1 85022471 . G C 1111.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.85;SOR=4.479 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1140,87,0 chr1 85041391 . G T 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.66;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 85042430 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 85071819 . T A 643.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.49;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,18:18:54:672,54,0 chr1 85071839 . T C 712.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.94;SOR=2.636 GT:AD:DP:GQ:PL 1/1:0,21:21:63:741,63,0 chr1 85072920 . C A 146.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.210;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.46;ReadPosRankSum=0.210;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:175,0,24 chr1 85073196 . G A 766.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.023;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.91;ReadPosRankSum=-0.697;SOR=0.693 GT:AD:DP:GQ:PL 0/1:11,24:35:99:795,0,307 chr1 85073264 . A G 366.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.34;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:32:395,32,0 chr1 85081587 . A G 635.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.061;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.16;ReadPosRankSum=-0.509;SOR=0.533 GT:AD:DP:GQ:PL 0/1:11,24:35:99:664,0,252 chr1 85082262 . T C 345.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.481;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=4.323;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.17;ReadPosRankSum=-0.855;SOR=0.148 GT:AD:DP:GQ:PL 0/1:19,15:34:99:374,0,591 chr1 85085740 . A G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 85086233 . G C 46.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:21:75,0,21 chr1 85086492 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 85089989 . A C 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.289;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=-0.699;SOR=0.269 GT:AD:DP:GQ:PL 0/1:6,6:12:99:180,0,168 chr1 85093769 . A G 763.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.738;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=-0.531;SOR=0.593 GT:AD:DP:GQ:PL 0/1:32,30:62:99:792,0,980 chr1 85094630 . T C 322.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.67;ReadPosRankSum=0.721;SOR=0.540 GT:AD:DP:GQ:PL 0/1:12,10:22:99:351,0,435 chr1 85095863 . T C 572.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.211;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=3.432;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.97;ReadPosRankSum=-0.686;SOR=1.584 GT:AD:DP:GQ:PL 0/1:21,20:41:99:601,0,569 chr1 85096189 . C T 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.22;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 85098455 . A G 381.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.479;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=7.186;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.46;ReadPosRankSum=-0.865;SOR=3.056 GT:AD:DP:GQ:PL 0/1:5,12:17:90:410,0,90 chr1 85108338 . G A 352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.934;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.57;ReadPosRankSum=1.493;SOR=0.446 GT:AD:DP:GQ:PL 0/1:15,11:26:99:381,0,530 chr1 85126330 . A G 90.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:118,9,0 chr1 85126443 . G T 1255.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.63;SOR=3.675 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1284,102,0 chr1 85129962 . C T 2149.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.05;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2178,222,0 chr1 85130292 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 85147185 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 85158866 . C T 3341.77 PASS AC=2;AF=1.00;AN=2;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.23;SOR=1.211 GT:AD:DP:GQ:PL 1/1:0,107:107:99:3370,320,0 chr1 85159181 . G A 2074.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.07;SOR=1.211 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2103,207,0 chr1 85182030 . T C 927.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.93;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,30:30:90:956,90,0 chr1 85182937 . C T 4561.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.30;SOR=1.204 GT:AD:DP:GQ:PL 1/1:0,137:137:99:4590,411,0 chr1 85183222 . T C 836.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.87;SOR=2.925 GT:AD:DP:GQ:PL 1/1:0,24:24:72:865,72,0 chr1 85201229 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 85254643 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 85258898 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.63;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 85276001 . T C 1368.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.47;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1397,111,0 chr1 85276238 . G C 2320.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.20;SOR=0.754 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2349,198,0 chr1 85276329 . G C 1493.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1522,137,0 chr1 85284032 . C G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 85300115 . A G 197.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.72;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:226,24,0 chr1 85423397 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 85472804 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 85472878 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 85580878 . C A 1455.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.972;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=33.09;ReadPosRankSum=1.706;SOR=2.124 GT:AD:DP:GQ:PL 1/1:1,43:44:99:1484,121,0 chr1 85581241 . G A 1613.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.57;SOR=4.565 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1642,123,0 chr1 85654215 . A G 341.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.327;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.14;ReadPosRankSum=0.165;SOR=0.941 GT:AD:DP:GQ:PL 0/1:12,14:26:99:370,0,319 chr1 85654341 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 85680989 . G A 563.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.430;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=4.363;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.08;ReadPosRankSum=-0.045;SOR=0.190 GT:AD:DP:GQ:PL 0/1:14,19:33:99:592,0,427 chr1 85701998 . T A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 85702274 . C T 1035.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.37;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1064,96,0 chr1 85707417 . T C 275.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.64;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:304,27,0 chr1 85707615 . C T 1587.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.323;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=3.291;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.70;ReadPosRankSum=-0.565;SOR=1.002 GT:AD:DP:GQ:PL 0/1:61,64:125:99:1616,0,1546 chr1 85708549 . G T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 85708576 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 85715853 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 85736061 . C T 193.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.998;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.15;ReadPosRankSum=-0.998;SOR=0.293 GT:AD:DP:GQ:PL 0/1:5,7:12:99:222,0,173 chr1 85736333 . C T 3488.77 PASS AC=2;AF=1.00;AN=2;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.30;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,108:108:99:3517,324,0 chr1 85736419 . C A 1214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.539;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=1.573;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=-1.419;SOR=0.879 GT:AD:DP:GQ:PL 0/1:55,49:104:99:1243,0,1496 chr1 85744863 . G A 910.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.50;SOR=3.014 GT:AD:DP:GQ:PL 1/1:0,25:25:75:939,75,0 chr1 85745642 . G A 808.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.59;SOR=2.400 GT:AD:DP:GQ:PL 1/1:0,23:23:69:837,69,0 chr1 85775424 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.86;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 85781166 . A C 1656.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.26;SOR=1.938 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1685,159,0 chr1 85783380 . C T 1000.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.28;SOR=1.839 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1029,93,0 chr1 85784228 . A G 3124.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.96;SOR=1.485 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3153,276,0 chr1 85786153 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr1 85786342 . A G 795.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.190;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.30;ReadPosRankSum=-1.921;SOR=0.570 GT:AD:DP:GQ:PL 0/1:22,30:52:99:824,0,626 chr1 85788109 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 85788122 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 85796922 . C T 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:31:115,0,31 chr1 85803171 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 85842542 . C A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.150;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:95:107,0,95 chr1 85868387 . T A 732.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.125;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.86;ReadPosRankSum=0.457;SOR=0.804 GT:AD:DP:GQ:PL 0/1:25,32:57:99:761,0,552 chr1 85868633 . T C 575.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.115;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.129;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.00;ReadPosRankSum=0.190;SOR=0.941 GT:AD:DP:GQ:PL 0/1:26,22:48:99:604,0,669 chr1 85868992 . T C 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=0.000;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:137,0,221 chr1 85869067 . T C 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.13;ReadPosRankSum=0.524;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:137,0,65 chr1 85874510 . G T 613.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.80;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:642,51,0 chr1 85874579 . C A 447.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.226;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.92;ReadPosRankSum=1.065;SOR=0.631 GT:AD:DP:GQ:PL 0/1:21,20:41:99:476,0,584 chr1 85874840 . T C 669.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.01;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,18:18:54:698,54,0 chr1 85874841 . G A 171.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.707;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.884;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=1.435;SOR=1.688 GT:AD:DP:GQ:PL 0/1:11,6:17:99:200,0,340 chr1 85875111 . T C 328.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.89;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:33:357,33,0 chr1 85875197 . A G 559.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.015;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.745;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.49;ReadPosRankSum=-1.283;SOR=1.460 GT:AD:DP:GQ:PL 0/1:14,18:32:99:588,0,352 chr1 85875209 . A G 376.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.714;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.47;ReadPosRankSum=-0.553;SOR=0.668 GT:AD:DP:GQ:PL 0/1:20,16:36:99:405,0,591 chr1 85875470 . G A 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.226;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=6.193;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.26;ReadPosRankSum=0.255;SOR=2.655 GT:AD:DP:GQ:PL 0/1:13,9:22:99:298,0,348 chr1 85896119 . C G 894.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.14;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,27:27:81:923,81,0 chr1 85897320 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 85897326 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 85909971 . C G 2025.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.24;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2054,201,0 chr1 85910157 . G A 77.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.96;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:106,0,107 chr1 85970167 . T C 201.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.81;ReadPosRankSum=1.723;SOR=0.446 GT:AD:DP:GQ:PL 0/1:4,8:12:96:230,0,96 chr1 85971114 . C T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.64;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 85987554 . T G 513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.267;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=4.108;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.28;ReadPosRankSum=0.267;SOR=1.315 GT:AD:DP:GQ:PL 0/1:29,21:50:99:542,0,721 chr1 86017239 . A T 208.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.156;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.03;ReadPosRankSum=0.587;SOR=0.693 GT:AD:DP:GQ:PL 0/1:16,10:26:99:237,0,420 chr1 86022231 . C A 526.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.499;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=1.181;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=0.958;SOR=0.430 GT:AD:DP:GQ:PL 0/1:24,20:44:99:555,0,666 chr1 86022298 . G A 1190.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.77;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1219,119,0 chr1 86022549 . G A 608.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.654;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.98;ReadPosRankSum=-0.351;SOR=0.747 GT:AD:DP:GQ:PL 0/1:37,24:61:99:637,0,953 chr1 86032086 . C G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 86046853 . C T 746.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.430;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.70;ReadPosRankSum=-1.313;SOR=0.782 GT:AD:DP:GQ:PL 0/1:44,33:77:99:775,0,1334 chr1 86063951 . A C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.440;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 86089138 . G A 795.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.990;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.95;ReadPosRankSum=0.077;SOR=0.685 GT:AD:DP:GQ:PL 0/1:17,25:42:99:824,0,443 chr1 86092284 . G A 491.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.613;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=2.480;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.64;ReadPosRankSum=1.359;SOR=0.357 GT:AD:DP:GQ:PL 0/1:30,21:51:99:520,0,849 chr1 86125232 . G A 2282.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.71;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2311,215,0 chr1 86126154 . G A 3036.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.97;SOR=1.354 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3065,285,0 chr1 86156309 . C A 2201.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.16;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2230,186,0 chr1 86341735 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.524;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 86341935 . C T 1261.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.77;SOR=1.347 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1290,122,0 chr1 86343380 . T A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 86349005 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 86352889 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 86354584 . C T 1610.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.98;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1639,159,0 chr1 86356291 . T A 180.90 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.73;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 86356548 . A G 1527.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.305;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=5.341;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.84;ReadPosRankSum=-0.074;SOR=0.619 GT:AD:DP:GQ:PL 0/1:65,64:129:99:1556,0,1694 chr1 86357820 . A G 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.293;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.41;ReadPosRankSum=-0.534;SOR=0.446 GT:AD:DP:GQ:PL 0/1:8,6:14:99:174,0,258 chr1 86372475 . C T 974.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.54;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1003,99,0 chr1 86382272 . G A 244.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.247;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.48;ReadPosRankSum=-1.331;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,10:14:91:273,0,91 chr1 86386938 . A G 1005.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.055;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=2.968;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.18;ReadPosRankSum=-0.147;SOR=0.398 GT:AD:DP:GQ:PL 0/1:49,41:90:99:1034,0,1387 chr1 86425322 . C A 243.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.538;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.31;ReadPosRankSum=-0.137;SOR=1.426 GT:AD:DP:GQ:PL 0/1:3,9:12:55:272,0,55 chr1 86425496 . T C 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.501;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.010;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=0.241;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,6:10:99:218,0,103 chr1 86428688 . G T 462.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.328;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.57;ReadPosRankSum=-2.091;SOR=0.682 GT:AD:DP:GQ:PL 0/1:35,19:54:99:491,0,927 chr1 86428813 . T C 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=0.748;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:218,0,176 chr1 86430671 . G A 947.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=6.518 GT:AD:DP:GQ:PL 1/1:0,25:25:75:976,75,0 chr1 86430858 . G A 1400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.396;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=1.490;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.18;ReadPosRankSum=-0.915;SOR=0.873 GT:AD:DP:GQ:PL 0/1:57,58:115:99:1429,0,1565 chr1 86432290 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.13;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 86432632 . T C 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.526;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=2.560;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.49;ReadPosRankSum=1.180;SOR=0.127 GT:AD:DP:GQ:PL 0/1:20,8:28:99:182,0,683 chr1 86440431 . T C 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-0.842;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr1 86447582 . C T 1681.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.682;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=0.783;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.87;ReadPosRankSum=0.560;SOR=0.581 GT:AD:DP:GQ:PL 0/1:46,60:106:99:1710,0,1363 chr1 86455221 . A G 931.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.515;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=6.185;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.25;ReadPosRankSum=-0.330;SOR=1.265 GT:AD:DP:GQ:PL 0/1:71,42:113:99:960,0,1793 chr1 86473157 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 86473225 . C T 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr1 86473447 . C T 2765.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.08;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2794,265,0 chr1 86473707 . G A 3585.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.15;SOR=2.193 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3614,315,0 chr1 86482292 . A T 2425.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.50;SOR=1.150 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2454,231,0 chr1 86482486 . T C 403.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.56;ReadPosRankSum=-1.151;SOR=0.776 GT:AD:DP:GQ:PL 0/1:11,12:23:99:432,0,390 chr1 86486641 . A G 4397.77 PASS AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.12;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,151:151:99:4426,453,0 chr1 86486918 . A G 198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.150;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.85;ReadPosRankSum=1.068;SOR=1.863 GT:AD:DP:GQ:PL 0/1:2,6:8:42:227,0,42 chr1 86488789 . C T 218.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.26;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:247,18,0 chr1 86488908 . T C 905.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.556;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.17;ReadPosRankSum=-1.186;SOR=0.773 GT:AD:DP:GQ:PL 0/1:27,29:56:99:934,0,891 chr1 86491102 . C G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.95;ReadPosRankSum=-0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:99:113,0,110 chr1 86493331 . T C 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.207;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.06;ReadPosRankSum=0.748;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,6:12:99:221,0,214 chr1 86493490 . T C 1605.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.039;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=0.676;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.45;ReadPosRankSum=-0.533;SOR=0.786 GT:AD:DP:GQ:PL 0/1:64,65:129:99:1634,0,1707 chr1 86493741 . C A 262.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.115;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.46;ReadPosRankSum=-0.803;SOR=0.223 GT:AD:DP:GQ:PL 0/1:8,9:17:99:291,0,282 chr1 86494113 . C T 805.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.52;ReadPosRankSum=0.111;SOR=0.556 GT:AD:DP:GQ:PL 0/1:21,25:46:99:834,0,653 chr1 86498392 . T G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 86553085 . A G 4618.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.47;SOR=1.493 GT:AD:DP:GQ:PL 1/1:0,138:138:99:4647,413,0 chr1 86560136 . T C 622.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.912;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.39;ReadPosRankSum=-0.590;SOR=0.639 GT:AD:DP:GQ:PL 0/1:17,21:38:99:651,0,406 chr1 86566247 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 86571063 . C A 3856.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.87;SOR=1.792 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3885,363,0 chr1 86571263 . C T 965.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.816;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=7.953;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.94;ReadPosRankSum=-0.066;SOR=2.242 GT:AD:DP:GQ:PL 0/1:26,31:57:99:994,0,707 chr1 86572557 . T C 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.85;ReadPosRankSum=-0.180;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,2:8:59:59,0,227 chr1 86635562 . A G 295.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.601;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.83;ReadPosRankSum=0.181;SOR=0.941 GT:AD:DP:GQ:PL 0/1:13,12:25:99:324,0,331 chr1 86635692 . C G 717.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.355;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.054;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.54;ReadPosRankSum=0.172;SOR=0.627 GT:AD:DP:GQ:PL 0/1:24,29:53:99:746,0,571 chr1 86735046 . C G 1424.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.195;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=2.526;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.50;ReadPosRankSum=-0.576;SOR=0.457 GT:AD:DP:GQ:PL 0/1:58,56:114:99:1453,0,1538 chr1 86826785 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 86826865 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 86863333 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.34;MQRankSum=-1.645;QD=9.35;ReadPosRankSum=0.524;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,359 chr1 86863335 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.34;MQRankSum=-1.645;QD=9.35;ReadPosRankSum=0.524;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,359 chr1 86863342 . A C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.34;MQRankSum=-1.645;QD=9.35;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,359 chr1 86863347 . A C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.34;MQRankSum=-1.645;QD=9.35;ReadPosRankSum=0.524;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,359 chr1 86863367 . A T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.14;MQRankSum=-1.834;QD=7.29;ReadPosRankSum=0.842;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:72:72,0,484 chr1 86863375 . A G 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.319;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.13;MQRankSum=-2.100;QD=4.72;ReadPosRankSum=0.619;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,2:8:66:66,0,735 chr1 86863376 . C A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.13;MQRankSum=-2.100;QD=4.72;ReadPosRankSum=0.619;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,2:8:66:66,0,735 chr1 86863380 . T C 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.13;MQRankSum=-2.100;QD=4.35;ReadPosRankSum=0.619;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,2:8:63:63,0,816 chr1 86863386 . G T 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.46;MQRankSum=-2.200;QD=3.86;ReadPosRankSum=0.282;SOR=0.132 GT:AD:DP:GQ:PL 0/1:7,2:9:63:63,0,816 chr1 86863392 . A T 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.46;MQRankSum=-2.200;QD=3.86;ReadPosRankSum=0.282;SOR=0.132 GT:AD:DP:GQ:PL 0/1:7,2:9:63:63,0,816 chr1 86863422 . A G 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.548;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.67;MQRankSum=-3.859;QD=2.69;ReadPosRankSum=-1.722;SOR=0.035 GT:AD:DP:GQ:PL 0/1:15,2:17:74:74,0,917 chr1 86863426 . T A 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.577;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=8.016;MLEAC=1;MLEAF=0.500;MQ=58.81;MQRankSum=-3.251;QD=2.41;ReadPosRankSum=-2.359;SOR=0.008 GT:AD:DP:GQ:PL 0/1:16,3:19:74:74,0,917 chr1 86899424 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 86993012 . G A 4232.77 PASS AC=2;AF=1.00;AN=2;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.07;SOR=1.366 GT:AD:DP:GQ:PL 1/1:0,128:128:99:4261,384,0 chr1 87045494 . C T 3853.77 PASS AC=2;AF=1.00;AN=2;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.98;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,133:133:99:3882,398,0 chr1 87045715 . C T 570.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.66;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:48:599,48,0 chr1 87046037 . C T 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.68;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 87046709 . T C 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr1 87046759 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 87072517 . G A 1974.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.31;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,46:46:99:2003,138,0 chr1 87072743 . G A 107.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:135,12,0 chr1 87073279 . G A 251.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.83;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:280,21,0 chr1 87074834 . G T 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 87084175 . A G 917.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.59;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,30:30:90:946,90,0 chr1 87097985 . G A 1449.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.89;SOR=2.613 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1478,117,0 chr1 87104715 . G A 2406.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.88;SOR=2.269 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2435,207,0 chr1 87132434 . T G 2305.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.54;SOR=1.430 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2334,186,0 chr1 87134014 . G A 5675.77 PASS AC=2;AF=1.00;AN=2;DP=184;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.97;QD=30.85;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,184:184:99:5704,551,0 chr1 87140516 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 87148336 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 87148337 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 87168078 . C T 1685.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.72;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1714,150,0 chr1 87243541 . C A 1029.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.041;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=3.875;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.61;ReadPosRankSum=-1.132;SOR=1.368 GT:AD:DP:GQ:PL 0/1:24,38:62:99:1058,0,600 chr1 87339660 . T A 515.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.188;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.481;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.89;ReadPosRankSum=0.622;SOR=1.075 GT:AD:DP:GQ:PL 0/1:16,24:40:99:553,0,371 chr1 87505761 . G A 59.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:87,9,0 chr1 87579851 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 87897632 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 88204288 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 88395956 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 88395987 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 88467164 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 88637757 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 88760293 . T C 1168.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.22;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1197,119,0 chr1 88770346 . T A 2243.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.52;SOR=2.566 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2272,195,0 chr1 88784469 . G A 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 88805891 . T C 2531.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.68;SOR=1.032 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2560,219,0 chr1 88815282 . A G 602.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.40;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:66:631,66,0 chr1 88841792 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 88857299 . G A 7895.77 PASS AC=2;AF=1.00;AN=2;DP=255;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.96;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,255:255:99:7924,764,0 chr1 88983595 . C T 242.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.067;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=12.141;MLEAC=1;MLEAF=0.500;MQ=58.16;MQRankSum=-3.595;QD=3.57;ReadPosRankSum=-1.288;SOR=2.506 GT:AD:DP:GQ:PL 0/1:55,13:68:99:271,0,1640 chr1 88983615 . C G 311.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.474;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=16.842;MLEAC=1;MLEAF=0.500;MQ=58.26;MQRankSum=-3.999;QD=4.27;ReadPosRankSum=-0.062;SOR=2.872 GT:AD:DP:GQ:PL 0/1:58,15:73:99:340,0,1706 chr1 88983707 . T C 654.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.808;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=4.821;MLEAC=1;MLEAF=0.500;MQ=58.88;MQRankSum=-3.259;QD=6.61;ReadPosRankSum=1.329;SOR=0.621 GT:AD:DP:GQ:PL 0/1:77,22:99:99:683,0,3395 chr1 88983716 . T C 609.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.869;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=4.920;MLEAC=1;MLEAF=0.500;MQ=58.92;MQRankSum=-3.400;QD=6.04;ReadPosRankSum=1.482;SOR=0.470 GT:AD:DP:GQ:PL 0/1:80,21:101:99:638,0,3476 chr1 88988372 . T C 1770.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.307;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=1.467;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.52;ReadPosRankSum=-0.538;SOR=0.888 GT:AD:DP:GQ:PL 0/1:63,68:131:99:1799,0,1601 chr1 89013171 . C G 333.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.314;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.89;ReadPosRankSum=-0.927;SOR=0.223 GT:AD:DP:GQ:PL 0/1:10,11:21:99:362,0,355 chr1 89013380 . G A 1079.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.323;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=1.796;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.41;ReadPosRankSum=-0.860;SOR=0.912 GT:AD:DP:GQ:PL 0/1:42,45:87:99:1108,0,1104 chr1 89013391 . C T 946.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.365;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.889;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.83;ReadPosRankSum=-0.417;SOR=0.922 GT:AD:DP:GQ:PL 0/1:40,40:80:99:975,0,1078 chr1 89014075 . T C 1427.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.790;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=2.427;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.86;ReadPosRankSum=0.271;SOR=0.496 GT:AD:DP:GQ:PL 0/1:60,51:111:99:1456,0,1736 chr1 89020354 . C T 4717.77 PASS AC=2;AF=1.00;AN=2;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.60;SOR=2.394 GT:AD:DP:GQ:PL 1/1:0,131:131:99:4746,393,0 chr1 89034502 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 89054891 . C A 843.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.026;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=0.820;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.52;ReadPosRankSum=0.207;SOR=0.527 GT:AD:DP:GQ:PL 0/1:65,34:99:99:872,0,1940 chr1 89054953 . G A 644.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.666;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=4.018;MLEAC=1;MLEAF=0.500;MQ=57.14;MQRankSum=-1.019;QD=10.40;ReadPosRankSum=1.095;SOR=0.313 GT:AD:DP:GQ:PL 0/1:42,20:62:99:673,0,2251 chr1 89054960 . C T 612.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.010;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.51;MQRankSum=-0.766;QD=10.94;ReadPosRankSum=1.474;SOR=0.588 GT:AD:DP:GQ:PL 0/1:38,18:56:99:641,0,2087 chr1 89056829 . C T 1215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.087;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=2.985;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.41;ReadPosRankSum=-1.269;SOR=0.426 GT:AD:DP:GQ:PL 0/1:53,45:98:99:1244,0,1507 chr1 89056963 . G C 3133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.879;ClippingRankSum=0.000;DP=230;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.63;ReadPosRankSum=2.020;SOR=0.714 GT:AD:DP:GQ:PL 0/1:113,117:230:99:3162,0,3266 chr1 89058974 . C G 1223.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.289;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.849;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.49;ReadPosRankSum=-0.650;SOR=0.643 GT:AD:DP:GQ:PL 0/1:36,43:79:99:1252,0,1096 chr1 89059996 . A G 237.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.660;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.00;MQRankSum=-0.660;QD=21.62;ReadPosRankSum=1.723;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,8:11:92:266,0,92 chr1 89092420 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 89108343 . G A 652.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.118;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.45;ReadPosRankSum=0.277;SOR=0.780 GT:AD:DP:GQ:PL 0/1:31,26:57:99:681,0,850 chr1 89109994 . T C 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-0.566;SOR=1.022 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 89114258 . T C 2453.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.082;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=1.149;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=0.401;SOR=0.809 GT:AD:DP:GQ:PL 0/1:86,98:184:99:2482,0,2234 chr1 89117007 . G C 1536.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.217;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.25;ReadPosRankSum=-1.508;SOR=0.709 GT:AD:DP:GQ:PL 0/1:85,65:150:99:1565,0,2166 chr1 89117861 . T C 213.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.736;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.44;ReadPosRankSum=-0.737;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,7:13:99:242,0,193 chr1 89117890 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 89132072 . T C 201.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=28.83;ReadPosRankSum=-0.566;SOR=2.584 GT:AD:DP:GQ:PL 0/1:1,6:7:21:230,0,21 chr1 89141796 . G T 856.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.770;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=1.670;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.55;ReadPosRankSum=0.095;SOR=0.379 GT:AD:DP:GQ:PL 0/1:15,23:38:99:885,0,834 chr1 89141803 . T C 765.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.486;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.70;ReadPosRankSum=0.935;SOR=0.446 GT:AD:DP:GQ:PL 0/1:13,18:31:99:794,0,766 chr1 89149196 . T C 57.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.56;ReadPosRankSum=0.524;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:86,0,27 chr1 89150296 . C T 128.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.086;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.05;ReadPosRankSum=-0.130;SOR=0.784 GT:AD:DP:GQ:PL 0/1:11,5:16:99:157,0,377 chr1 89153033 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 89171895 . G A 4180.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.113;ClippingRankSum=0.000;DP=352;ExcessHet=3.0103;FS=2.282;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.98;ReadPosRankSum=-1.419;SOR=0.826 GT:AD:DP:GQ:PL 0/1:174,175:349:99:4209,0,4259 chr1 89185167 . A T 369.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.323;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.08;ReadPosRankSum=0.159;SOR=0.223 GT:AD:DP:GQ:PL 0/1:11,12:23:99:398,0,390 chr1 89186388 . T C 103.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.178;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.96;MQRankSum=-4.479;QD=2.31;ReadPosRankSum=-3.588;SOR=0.557 GT:AD:DP:GQ:PL 0/1:39,6:45:99:132,0,9904 chr1 89186389 . C T 103.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.097;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.96;MQRankSum=-4.479;QD=2.31;ReadPosRankSum=-3.630;SOR=0.557 GT:AD:DP:GQ:PL 0/1:39,6:45:99:132,0,9904 chr1 89186395 . A T 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.130;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.02;MQRankSum=-4.644;QD=2.89;ReadPosRankSum=-2.899;SOR=0.606 GT:AD:DP:GQ:PL 0/1:42,6:48:99:167,0,10325 chr1 89186407 . T G 97.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.060;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.715;MLEAC=1;MLEAF=0.500;MQ=59.02;MQRankSum=-4.644;QD=2.04;ReadPosRankSum=-1.787;SOR=1.199 GT:AD:DP:GQ:PL 0/1:42,6:48:99:126,0,10323 chr1 89186411 . G A 177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.887;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=1.735;MLEAC=1;MLEAF=0.500;MQ=59.04;MQRankSum=-4.698;QD=3.63;ReadPosRankSum=-1.177;SOR=1.265 GT:AD:DP:GQ:PL 0/1:43,6:49:99:206,0,10372 chr1 89186414 . C T 177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.150;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.524;MLEAC=1;MLEAF=0.500;MQ=59.06;MQRankSum=-4.018;QD=3.56;ReadPosRankSum=-2.285;SOR=1.179 GT:AD:DP:GQ:PL 0/1:42,8:50:99:206,0,10372 chr1 89186419 . A T 174.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.000;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=1.518;MLEAC=1;MLEAF=0.500;MQ=59.10;MQRankSum=-4.111;QD=3.36;ReadPosRankSum=-0.901;SOR=1.179 GT:AD:DP:GQ:PL 0/1:44,8:52:99:203,0,10263 chr1 89195545 . T G 1654.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.156;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=1.460;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.400;SOR=0.877 GT:AD:DP:GQ:PL 0/1:70,63:133:99:1683,0,1899 chr1 89198593 . T C 104.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.599;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.48;ReadPosRankSum=0.963;SOR=0.269 GT:AD:DP:GQ:PL 0/1:9,5:14:99:133,0,300 chr1 89205679 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 89260909 . G A 2148.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.90;SOR=3.952 GT:AD:DP:GQ:PL 1/1:0,55:55:99:2177,165,0 chr1 89265040 . C T 1788.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.94;SOR=1.919 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1817,168,0 chr1 89266276 . G A 1087.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.99;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1116,84,0 chr1 89267590 . T C 1805.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.07;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1834,159,0 chr1 89268591 . A C 898.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.86;SOR=4.892 GT:AD:DP:GQ:PL 1/1:0,23:23:69:927,69,0 chr1 89285212 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 89289988 . T A 327.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.323;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=5.040;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.80;ReadPosRankSum=-1.564;SOR=1.609 GT:AD:DP:GQ:PL 0/1:28,14:42:99:356,0,737 chr1 89368374 . C T 1011.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.69;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1040,78,0 chr1 89380732 . C T 402.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.575;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=3.203;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.51;ReadPosRankSum=-0.532;SOR=1.885 GT:AD:DP:GQ:PL 0/1:11,12:23:99:431,0,355 chr1 89381813 . G T 1828.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.538;ClippingRankSum=0.000;DP=176;ExcessHet=3.0103;FS=10.362;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.39;ReadPosRankSum=-0.804;SOR=1.061 GT:AD:DP:GQ:PL 0/1:104,72:176:99:1857,0,2794 chr1 89381852 . C T 1382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.688;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=3.826;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.75;ReadPosRankSum=-0.980;SOR=0.994 GT:AD:DP:GQ:PL 0/1:94,64:158:99:1411,0,2762 chr1 89381885 . A G 1348.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.684;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=1.466;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.22;ReadPosRankSum=0.880;SOR=0.871 GT:AD:DP:GQ:PL 0/1:83,49:132:99:1377,0,2383 chr1 89382447 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 89383642 . C G 1531.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.003;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=4.574;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=-2.812;SOR=1.147 GT:AD:DP:GQ:PL 0/1:59,58:117:99:1560,0,1590 chr1 89383791 . G A 1920.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.508;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=0.730;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.78;ReadPosRankSum=1.317;SOR=0.595 GT:AD:DP:GQ:PL 0/1:43,65:108:99:1949,0,1287 chr1 89383882 . T G 1856.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.300;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=0.637;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.86;ReadPosRankSum=-1.003;SOR=0.625 GT:AD:DP:GQ:PL 0/1:62,72:134:99:1885,0,1598 chr1 89384183 . A T 924.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.672;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=4.438;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.50;ReadPosRankSum=-2.321;SOR=1.209 GT:AD:DP:GQ:PL 0/1:38,36:74:99:953,0,1081 chr1 89391547 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 89410232 . T C 1613.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.000;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=1.071;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.30;ReadPosRankSum=-0.170;SOR=0.867 GT:AD:DP:GQ:PL 0/1:46,53:99:99:1642,0,1453 chr1 89410573 . T C 1604.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.841;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.958;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.26;ReadPosRankSum=-0.955;SOR=0.898 GT:AD:DP:GQ:PL 0/1:43,50:93:99:1633,0,1315 chr1 89410652 . C T 676.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.020;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.29;ReadPosRankSum=1.788;SOR=0.765 GT:AD:DP:GQ:PL 0/1:15,22:37:99:705,0,444 chr1 89419999 . G A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.842;SOR=0.132 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 89420295 . G A 977.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.457;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.882;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.70;ReadPosRankSum=-0.265;SOR=0.848 GT:AD:DP:GQ:PL 0/1:38,39:77:99:1006,0,948 chr1 89421155 . A G 1976.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.280;ClippingRankSum=0.000;DP=172;ExcessHet=3.0103;FS=0.561;MLEAC=1;MLEAF=0.500;MQ=59.99;MQRankSum=0.000;QD=11.56;ReadPosRankSum=1.002;SOR=0.766 GT:AD:DP:GQ:PL 0/1:88,83:171:99:2005,0,2312 chr1 89421237 . G A 1533.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.814;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.99;MQRankSum=0.000;QD=13.11;ReadPosRankSum=1.226;SOR=0.663 GT:AD:DP:GQ:PL 0/1:61,56:117:99:1562,0,1822 chr1 89421535 . A C 148.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.691;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=2.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.44;ReadPosRankSum=-0.448;SOR=1.911 GT:AD:DP:GQ:PL 0/1:7,6:13:99:177,0,151 chr1 89422812 . A G 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr1 89422971 . C T 603.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.183;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.870;MLEAC=1;MLEAF=0.500;MQ=54.97;MQRankSum=-0.855;QD=6.56;ReadPosRankSum=0.025;SOR=0.520 GT:AD:DP:GQ:PL 0/1:61,31:92:99:632,0,1646 chr1 89422993 . T A 673.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.430;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=0.794;MLEAC=1;MLEAF=0.500;MQ=55.67;MQRankSum=-1.052;QD=6.48;ReadPosRankSum=-0.406;SOR=0.584 GT:AD:DP:GQ:PL 0/1:70,34:104:99:702,0,1903 chr1 89423026 . C G 975.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.284;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.54;MQRankSum=-0.650;QD=8.48;ReadPosRankSum=1.552;SOR=0.610 GT:AD:DP:GQ:PL 0/1:85,30:115:99:1004,0,4056 chr1 89423029 . G T 972.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.074;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.65;MQRankSum=-0.613;QD=8.46;ReadPosRankSum=1.546;SOR=0.614 GT:AD:DP:GQ:PL 0/1:85,30:115:99:1001,0,4140 chr1 89582341 . A T 129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.150;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.98;ReadPosRankSum=-0.529;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,5:13:99:158,0,271 chr1 89582689 . C T 2295.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.801;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.72;ReadPosRankSum=-0.280;SOR=0.646 GT:AD:DP:GQ:PL 0/1:73,83:156:99:2324,0,1875 chr1 89706276 . C T 1549.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.63;SOR=2.078 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1578,146,0 chr1 89710002 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 89712486 . A C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 89713184 . A G 5169.77 PASS AC=2;AF=1.00;AN=2;DP=162;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.91;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,162:162:99:5198,486,0 chr1 89773964 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 89773992 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 89954260 . G A 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr1 89987614 . A C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 89994185 . A G 4091.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.00;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,124:124:99:4120,372,0 chr1 89994423 . G A 1085.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.59;SOR=6.666 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1114,81,0 chr1 90005356 . T A 1854.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.33;SOR=5.464 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1883,141,0 chr1 90010388 . A G 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr1 90020853 . T G 3911.77 PASS AC=2;AF=1.00;AN=2;DP=127;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.80;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3940,381,0 chr1 90027467 . G A 2340.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.14;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2369,198,0 chr1 90273242 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 90340444 . C T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 90565272 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 90712090 . A C 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.728;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=0.308;SOR=0.836 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,228 chr1 90717323 . G T 665.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.349;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=1.289;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.48;ReadPosRankSum=0.825;SOR=0.452 GT:AD:DP:GQ:PL 0/1:19,24:43:99:694,0,670 chr1 90730542 . A G 108.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.78;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:137,15,0 chr1 90730619 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 90893660 . A G 312.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.50;QD=34.75;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:341,27,0 chr1 90982428 . C T 1452.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.91;SOR=1.378 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1481,141,0 chr1 91069029 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 91072201 . C T 96.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:125,15,0 chr1 91072250 . G T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 91106476 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 91106506 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 91138066 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 91141595 . T G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.94;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 91144849 . G A 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 91145006 . T C 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr1 91156012 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 91178847 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91178848 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91178861 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 91180638 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91180642 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91187917 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 91188173 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 91192098 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 91237568 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 91253187 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 91262496 . G A 2296.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.62;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2325,225,0 chr1 91262645 . T C 978.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.75;SOR=2.226 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1007,87,0 chr1 91265869 . T G 123.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:151,12,0 chr1 91273651 . C T 1018.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.96;SOR=1.819 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1047,102,0 chr1 91273857 . G A 761.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.12;SOR=2.400 GT:AD:DP:GQ:PL 1/1:0,23:23:69:790,69,0 chr1 91274548 . T G 2317.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.11;SOR=2.173 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2346,210,0 chr1 91276245 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91276252 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91281811 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 91290050 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 91313646 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 91315747 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 91315856 . T G 826.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.62;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,27:27:81:855,81,0 chr1 91328320 . T C 961.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.16;SOR=1.688 GT:AD:DP:GQ:PL 1/1:0,29:29:87:990,87,0 chr1 91328691 . G A 3561.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.92;SOR=1.015 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3590,315,0 chr1 91347627 . C T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.68;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 91375227 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 91375744 . T C 1060.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.22;SOR=2.694 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1089,93,0 chr1 91380817 . C A 1950.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.01;SOR=0.854 GT:AD:DP:GQ:PL 1/1:0,65:65:99:1979,195,0 chr1 91381097 . A T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 91385696 . T C 1414.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.68;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1443,126,0 chr1 91394238 . T C 2593.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.47;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2622,263,0 chr1 91404573 . G A 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 91436794 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91436798 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91441597 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 91464876 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 91500888 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 91508000 . T G 2612.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.07;SOR=1.795 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2641,237,0 chr1 91508477 . G A 242.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.260;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.14;ReadPosRankSum=0.725;SOR=1.179 GT:AD:DP:GQ:PL 0/1:12,8:20:99:271,0,409 chr1 91514890 . A G 3257.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.66;SOR=1.847 GT:AD:DP:GQ:PL 1/1:0,94:94:99:3286,282,0 chr1 91515092 . G A 1095.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.444;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.70;ReadPosRankSum=-0.494;SOR=0.693 GT:AD:DP:GQ:PL 0/1:40,40:80:99:1124,0,1157 chr1 91524015 . T G 1089.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.38;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1118,93,0 chr1 91535577 . T C 63.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.660;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.80;ReadPosRankSum=1.248;SOR=1.371 GT:AD:DP:GQ:PL 0/1:8,3:11:92:92,0,262 chr1 91535649 . T C 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-0.398;SOR=2.712 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,181 chr1 91557187 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91557188 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91601037 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 91601100 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 91627433 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91627442 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91635424 . A G 393.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.343;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.58;ReadPosRankSum=0.380;SOR=0.892 GT:AD:DP:GQ:PL 0/1:19,15:34:99:422,0,487 chr1 91642380 . C T 1059.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.741;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.60;ReadPosRankSum=0.536;SOR=0.686 GT:AD:DP:GQ:PL 0/1:58,42:100:99:1088,0,1712 chr1 91643342 . C T 2335.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.056;ClippingRankSum=0.000;DP=205;ExcessHet=3.0103;FS=7.956;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.45;ReadPosRankSum=-0.163;SOR=0.614 GT:AD:DP:GQ:PL 0/1:110,94:204:99:2364,0,2903 chr1 91672609 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 91708703 . A G 11941.77 PASS AC=2;AF=1.00;AN=2;DP=361;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.17;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,360:360:99:11970,1081,0 chr1 91712381 . A G 1642.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.043;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=2.957;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.18;ReadPosRankSum=0.318;SOR=0.462 GT:AD:DP:GQ:PL 0/1:79,68:147:99:1671,0,2230 chr1 91712703 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.67;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 91719257 . G T 2304.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.002;ClippingRankSum=0.000;DP=182;ExcessHet=3.0103;FS=3.529;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.66;ReadPosRankSum=-1.409;SOR=0.968 GT:AD:DP:GQ:PL 0/1:92,90:182:99:2333,0,2452 chr1 91719628 . T C 400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.70;ReadPosRankSum=0.038;SOR=0.193 GT:AD:DP:GQ:PL 0/1:12,12:24:99:429,0,427 chr1 91719794 . T C 1007.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.709;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=8.220;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.19;ReadPosRankSum=0.724;SOR=0.177 GT:AD:DP:GQ:PL 0/1:33,38:71:99:1036,0,983 chr1 91720100 . C T 2075.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.981;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=0.633;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.84;ReadPosRankSum=0.070;SOR=0.593 GT:AD:DP:GQ:PL 0/1:79,71:150:99:2104,0,2290 chr1 91730189 . C T 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-1.981;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,154 chr1 91735036 . A G 1640.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.04;SOR=2.935 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1669,135,0 chr1 91735070 . T C 1062.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.32;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1091,84,0 chr1 91735077 . C T 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.354;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=2.492;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.03;ReadPosRankSum=-0.578;SOR=0.157 GT:AD:DP:GQ:PL 0/1:18,8:26:99:185,0,606 chr1 91735196 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 91758419 . A G 579.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.14;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:608,45,0 chr1 91783641 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91783643 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91783644 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91783671 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91783679 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91783721 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91783728 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91783734 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91783743 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 91925757 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 91952671 . C T 38.74 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr1 91962938 . C A 1191.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.79;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1220,120,0 chr1 91969168 . C T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 91969172 . C T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.62;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 91978481 . T C 249.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.84;ReadPosRankSum=-1.217;SOR=0.976 GT:AD:DP:GQ:PL 0/1:6,8:14:99:278,0,208 chr1 91980555 . T C 661.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.83;SOR=2.948 GT:AD:DP:GQ:PL 1/1:0,19:19:57:690,57,0 chr1 91980841 . T A 629.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.156;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=5.987;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.60;ReadPosRankSum=-0.303;SOR=0.737 GT:AD:DP:GQ:PL 0/1:29,21:50:99:658,0,959 chr1 91981447 . A G 654.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.04;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:54:683,54,0 chr1 91992286 . C T 1089.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.05;SOR=1.418 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1118,102,0 chr1 91994056 . G A 1354.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.813;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=2.974;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.05;ReadPosRankSum=0.990;SOR=0.437 GT:AD:DP:GQ:PL 0/1:39,51:90:99:1383,0,1048 chr1 92001882 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 92002173 . A G 549.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.111;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=2.230;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.32;ReadPosRankSum=-0.751;SOR=1.047 GT:AD:DP:GQ:PL 0/1:35,24:59:99:578,0,830 chr1 92002295 . G A 113.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.335;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.34;ReadPosRankSum=0.998;SOR=0.120 GT:AD:DP:GQ:PL 0/1:6,5:11:99:142,0,217 chr1 92004324 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 92029879 . C T 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=-0.084;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,115 chr1 92043116 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 92074654 . T C 449.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.305;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.16;ReadPosRankSum=-2.261;SOR=0.836 GT:AD:DP:GQ:PL 0/1:19,18:37:99:478,0,498 chr1 92088726 . G A 1192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.032;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.71;ReadPosRankSum=0.748;SOR=0.747 GT:AD:DP:GQ:PL 0/1:37,50:87:99:1221,0,842 chr1 92102706 . A G 483.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.524;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.16;ReadPosRankSum=-1.534;SOR=0.368 GT:AD:DP:GQ:PL 0/1:7,17:24:99:512,0,221 chr1 92126359 . G A 245.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.26;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:274,21,0 chr1 92161564 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 92173190 . C G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 92173215 . A G 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.73;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr1 92173222 . A G 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr1 92180464 . G A 2368.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.83;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2397,204,0 chr1 92181666 . A G 2918.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.07;SOR=0.821 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2947,243,0 chr1 92181975 . C A 3403.77 PASS AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.73;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,104:104:99:3432,311,0 chr1 92183735 . A T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 92183778 . A G 505.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.20;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,14:14:42:534,42,0 chr1 92240990 . C A 886.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.529;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=3.876;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.67;ReadPosRankSum=0.151;SOR=1.380 GT:AD:DP:GQ:PL 0/1:39,31:70:99:915,0,980 chr1 92246709 . C T 1200.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.60;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1229,114,0 chr1 92286751 . T C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 92290386 . G A 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.11;ReadPosRankSum=1.235;SOR=1.802 GT:AD:DP:GQ:PL 0/1:8,8:16:99:286,0,265 chr1 92299271 . T A 1765.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.53;SOR=1.781 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1794,168,0 chr1 92299393 . C G 74.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.501;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.48;ReadPosRankSum=-1.501;SOR=0.078 GT:AD:DP:GQ:PL 0/1:6,4:10:99:103,0,221 chr1 92300204 . G A 569.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.614;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.047;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.75;ReadPosRankSum=1.474;SOR=0.655 GT:AD:DP:GQ:PL 0/1:28,25:53:99:598,0,639 chr1 92300333 . T A 320.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.725;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.04;ReadPosRankSum=2.623;SOR=1.112 GT:AD:DP:GQ:PL 0/1:10,10:20:99:349,0,523 chr1 92300334 . T G 320.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.205;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.04;ReadPosRankSum=2.582;SOR=1.112 GT:AD:DP:GQ:PL 0/1:10,10:20:99:349,0,523 chr1 92326255 . G T 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=-0.385;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,73 chr1 92333594 . C T 260.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.349;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.71;ReadPosRankSum=0.301;SOR=1.802 GT:AD:DP:GQ:PL 0/1:3,8:11:92:289,0,92 chr1 92386947 . A G 187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.940;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=0.344;SOR=0.693 GT:AD:DP:GQ:PL 0/1:7,7:14:99:216,0,182 chr1 92387069 . A G 261.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.608;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.47;ReadPosRankSum=-0.980;SOR=0.582 GT:AD:DP:GQ:PL 0/1:13,12:25:99:290,0,345 chr1 92475800 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-1.282;SOR=2.093 GT:AD:DP:GQ:PL 0/1:3,3:6:73:107,0,73 chr1 92480294 . A C 1109.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.588;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.00;ReadPosRankSum=-0.517;SOR=0.503 GT:AD:DP:GQ:PL 0/1:37,37:74:99:1138,0,1186 chr1 92480922 . G A 718.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.144;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.051;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.38;ReadPosRankSum=-1.458;SOR=0.859 GT:AD:DP:GQ:PL 0/1:26,24:50:99:747,0,833 chr1 92483541 . C A 1303.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.528;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=1.853;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.34;ReadPosRankSum=-2.068;SOR=0.514 GT:AD:DP:GQ:PL 0/1:33,52:85:99:1332,0,850 chr1 92513797 . A G 2546.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.976;ClippingRankSum=0.000;DP=201;ExcessHet=3.0103;FS=0.520;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.67;ReadPosRankSum=1.256;SOR=0.619 GT:AD:DP:GQ:PL 0/1:108,93:201:99:2575,0,2959 chr1 92520648 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 92563896 . A G 307.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.106;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.10;ReadPosRankSum=1.095;SOR=0.646 GT:AD:DP:GQ:PL 0/1:7,11:18:99:336,0,191 chr1 92563922 . A T 182.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.31;ReadPosRankSum=1.884;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:86:211,0,86 chr1 92580836 . G A 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:63:110,0,63 chr1 92605491 . G T 607.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.484;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.700;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.36;ReadPosRankSum=-0.651;SOR=0.356 GT:AD:DP:GQ:PL 0/1:14,21:35:99:636,0,445 chr1 92605614 . C T 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-0.431;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 92617024 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 92624266 . T C 404.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.502;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.96;ReadPosRankSum=0.963;SOR=0.741 GT:AD:DP:GQ:PL 0/1:13,16:29:99:433,0,316 chr1 92647027 . G A 167.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.799;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.98;ReadPosRankSum=-1.139;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,8:12:63:196,0,63 chr1 92663297 . A G 207.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.78;ReadPosRankSum=-0.253;SOR=0.473 GT:AD:DP:GQ:PL 0/1:2,8:10:53:236,0,53 chr1 92663380 . G A 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.364;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.98;ReadPosRankSum=1.389;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,8:14:99:224,0,109 chr1 92694018 . T C 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=0.712;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,224 chr1 92695345 . T C 836.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.816;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=1.732;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.00;ReadPosRankSum=0.382;SOR=0.919 GT:AD:DP:GQ:PL 0/1:58,35:93:99:865,0,1423 chr1 92698076 . C T 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-0.180;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,131 chr1 92702053 . C T 196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.875;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.89;ReadPosRankSum=-1.097;SOR=0.399 GT:AD:DP:GQ:PL 0/1:4,7:11:99:225,0,134 chr1 92702297 . A G 216.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.464;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.32;ReadPosRankSum=-0.447;SOR=0.425 GT:AD:DP:GQ:PL 0/1:12,9:21:99:245,0,370 chr1 92810877 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.46;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 92843296 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 92961309 . T C 1968.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.36;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1997,147,0 chr1 92961312 . G C 857.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.393;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=4.555;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.87;ReadPosRankSum=-1.651;SOR=0.264 GT:AD:DP:GQ:PL 0/1:16,32:48:99:886,0,388 chr1 93079600 . G A 1905.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.033;ClippingRankSum=0.000;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.38;ReadPosRankSum=-1.913;SOR=0.664 GT:AD:DP:GQ:PL 0/1:79,75:154:99:1934,0,1727 chr1 93100530 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 93101419 . T G 31.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0 chr1 93110745 . T G 553.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.57;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:582,42,0 chr1 93114435 . G A 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.75;ReadPosRankSum=0.967;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:98:224,0,98 chr1 93115322 . T C 173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.48;ReadPosRankSum=-0.987;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:202,0,215 chr1 93115435 . C T 678.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.807;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=6.355;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.34;ReadPosRankSum=1.066;SOR=0.204 GT:AD:DP:GQ:PL 0/1:30,25:55:99:707,0,912 chr1 93115467 . T C 1523.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.270;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=3.458;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.14;ReadPosRankSum=-1.047;SOR=0.440 GT:AD:DP:GQ:PL 0/1:57,59:116:99:1552,0,1630 chr1 93118642 . G A 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=0.120;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,106 chr1 93136637 . C T 2425.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.10;SOR=1.409 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2454,233,0 chr1 93154836 . G A 921.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.175;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=0.754;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.31;ReadPosRankSum=1.141;SOR=0.597 GT:AD:DP:GQ:PL 0/1:57,42:99:99:950,0,1524 chr1 93155926 . A G 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=0.366;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:109,0,109 chr1 93180650 . T C 1718.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.808;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=3.887;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.94;ReadPosRankSum=-0.025;SOR=0.808 GT:AD:DP:GQ:PL 0/1:78,66:144:99:1747,0,2042 chr1 93180861 . C T 1737.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.448;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=3.049;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.50;ReadPosRankSum=-0.726;SOR=0.986 GT:AD:DP:GQ:PL 0/1:70,69:139:99:1766,0,1916 chr1 93181063 . C T 372.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=39.39;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:30:401,30,0 chr1 93183259 . A G 315.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.74;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:344,27,0 chr1 93183554 . G A 853.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.354;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=7.704;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.77;ReadPosRankSum=-1.293;SOR=0.198 GT:AD:DP:GQ:PL 0/1:26,36:62:99:882,0,727 chr1 93184175 . A G 649.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.386;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.31;ReadPosRankSum=0.965;SOR=0.904 GT:AD:DP:GQ:PL 0/1:11,21:32:99:678,0,330 chr1 93191031 . A G 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.13;ReadPosRankSum=-1.150;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:95:95,0,107 chr1 93193793 . A T 380.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.73;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,12:12:36:409,36,0 chr1 93207131 . C T 211.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.208;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.086;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.59;ReadPosRankSum=-1.655;SOR=1.270 GT:AD:DP:GQ:PL 0/1:12,8:20:99:240,0,324 chr1 93207166 . A C 1180.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.35;SOR=2.517 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1209,99,0 chr1 93210058 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 93210757 . A G 609.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.081;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=1.747;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.18;ReadPosRankSum=1.049;SOR=1.255 GT:AD:DP:GQ:PL 0/1:23,20:43:99:638,0,695 chr1 93211021 . A G 205.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.43;ReadPosRankSum=0.485;SOR=0.368 GT:AD:DP:GQ:PL 0/1:11,7:18:99:234,0,401 chr1 93217653 . A G 178.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.530;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.52;ReadPosRankSum=1.859;SOR=0.859 GT:AD:DP:GQ:PL 0/1:10,7:17:99:207,0,298 chr1 93221534 . G T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.53;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 93246225 . T A 721.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.747;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=2.059;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.10;ReadPosRankSum=0.602;SOR=0.584 GT:AD:DP:GQ:PL 0/1:36,29:65:99:750,0,928 chr1 93254513 . C G 242.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.863;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.28;ReadPosRankSum=1.352;SOR=0.569 GT:AD:DP:GQ:PL 0/1:9,8:17:99:271,0,291 chr1 93321157 . G A 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 93321207 . G T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 93346012 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 93360621 . A T 1605.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.438;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=2.769;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.39;ReadPosRankSum=-0.417;SOR=0.426 GT:AD:DP:GQ:PL 0/1:74,67:141:99:1643,0,1893 chr1 93384726 . C A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 93497023 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 93536676 . A G 290.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.15;ReadPosRankSum=-1.203;SOR=0.693 GT:AD:DP:GQ:PL 0/1:9,9:18:99:319,0,322 chr1 93544273 . C T 291.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.052;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.89;ReadPosRankSum=-1.028;SOR=0.602 GT:AD:DP:GQ:PL 0/1:11,10:21:99:320,0,362 chr1 93546730 . G A 806.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.23;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:835,60,0 chr1 93696494 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 93702090 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 93742036 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 93850767 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 93850854 . G C 191.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:24:220,24,0 chr1 93852047 . A T 80.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0 chr1 93864173 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 93869638 . A T 864.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.47;SOR=4.003 GT:AD:DP:GQ:PL 1/1:0,23:23:69:893,69,0 chr1 93875581 . C T 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.88;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr1 93875711 . A G 2028.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.20;SOR=1.366 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2057,189,0 chr1 93876505 . C T 1300.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.684;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=1.587;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.01;ReadPosRankSum=-1.225;SOR=0.547 GT:AD:DP:GQ:PL 0/1:49,51:100:99:1329,0,1325 chr1 93877008 . C A 1894.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.84;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1923,168,0 chr1 93877467 . A G 2502.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.394 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2531,216,0 chr1 93877677 . T C 6734.77 PASS AC=2;AF=1.00;AN=2;DP=207;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.54;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,207:207:99:6763,621,0 chr1 93879160 . C T 20414.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=2.043;ClippingRankSum=0.000;DP=639;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.00;ReadPosRankSum=-0.084;SOR=0.699 GT:AD:DP:GQ:PL 1/1:2,636:638:99:20443,1880,0 chr1 93919105 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 93921224 . G C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 93927389 . C G 58.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:86,6,0 chr1 94005519 . A G 5109.77 PASS AC=2;AF=1.00;AN=2;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.55;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,157:157:99:5138,471,0 chr1 94008464 . G A 1160.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.15;SOR=3.334 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1189,87,0 chr1 94010999 . G A 1511.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.76;SOR=2.038 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1540,123,0 chr1 94011676 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 94029851 . C T 1191.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.116;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=4.513;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.70;ReadPosRankSum=1.061;SOR=1.286 GT:AD:DP:GQ:PL 0/1:54,33:87:99:1220,0,2246 chr1 94029861 . C T 1167.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.146;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=4.642;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.42;ReadPosRankSum=-1.014;SOR=1.341 GT:AD:DP:GQ:PL 0/1:49,32:81:99:1196,0,2075 chr1 94029931 . G A 267.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.953;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=2.208;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.64;ReadPosRankSum=-0.644;SOR=0.245 GT:AD:DP:GQ:PL 0/1:20,11:31:99:296,0,674 chr1 94030260 . T C 541.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.06;ReadPosRankSum=0.048;SOR=0.826 GT:AD:DP:GQ:PL 0/1:14,16:30:99:570,0,491 chr1 94030374 . T C 6989.77 PASS AC=2;AF=1.00;AN=2;DP=191;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.94;SOR=2.933 GT:AD:DP:GQ:PL 1/1:0,191:191:99:7018,574,0 chr1 94030697 . G A 1863.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.106;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=1.021;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.40;ReadPosRankSum=0.266;SOR=0.918 GT:AD:DP:GQ:PL 0/1:62,59:121:99:1892,0,1955 chr1 94031622 . G A 869.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.378;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=2.605;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.73;ReadPosRankSum=1.436;SOR=0.387 GT:AD:DP:GQ:PL 0/1:20,32:52:99:898,0,573 chr1 94043670 . G T 2340.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=4.909 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2369,183,0 chr1 94062807 . C T 4292.77 PASS AC=2;AF=1.00;AN=2;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.02;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,130:130:99:4321,390,0 chr1 94078720 . G A 1741.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.52;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1770,177,0 chr1 94079604 . C T 513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.430;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.53;ReadPosRankSum=0.569;SOR=0.793 GT:AD:DP:GQ:PL 0/1:21,20:41:99:542,0,591 chr1 94083527 . T C 2446.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.46;SOR=2.082 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2475,213,0 chr1 94087536 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 94102935 . A G 594.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.213;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.62;ReadPosRankSum=0.697;SOR=0.439 GT:AD:DP:GQ:PL 0/1:35,21:56:99:623,0,1129 chr1 94103266 . T C 1592.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.666;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=1.704;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.32;ReadPosRankSum=-0.186;SOR=0.899 GT:AD:DP:GQ:PL 0/1:44,60:104:99:1621,0,1053 chr1 94103386 . G C 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.32;ReadPosRankSum=-0.958;SOR=0.693 GT:AD:DP:GQ:PL 0/1:9,9:18:99:286,0,288 chr1 94108497 . C A 1531.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.594;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=0.840;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.63;ReadPosRankSum=-0.462;SOR=0.902 GT:AD:DP:GQ:PL 0/1:44,54:98:99:1560,0,1171 chr1 94111412 . T C 1483.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.304;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=1.937;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.69;ReadPosRankSum=-0.592;SOR=0.481 GT:AD:DP:GQ:PL 0/1:49,52:101:99:1512,0,1434 chr1 94112992 . T C 945.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.61;SOR=1.688 GT:AD:DP:GQ:PL 1/1:0,29:29:87:974,87,0 chr1 94128965 . A C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 94130735 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 94130746 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 94173781 . A G 622.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.24;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:651,48,0 chr1 94173891 . C T 3986.77 PASS AC=2;AF=1.00;AN=2;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.50;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,119:119:99:4015,357,0 chr1 94202414 . T C 741.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.831;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.819;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.24;ReadPosRankSum=0.995;SOR=0.752 GT:AD:DP:GQ:PL 0/1:56,34:90:99:770,0,1416 chr1 94202490 . C T 2814.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.99;SOR=1.281 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2843,237,0 chr1 94205228 . T C 1169.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.78;SOR=1.493 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1198,113,0 chr1 94205335 . T C 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=1.068;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,145 chr1 94209167 . G A 894.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.14;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,27:27:81:923,81,0 chr1 94475820 . G A 637.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.66;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:666,48,0 chr1 94515115 . C G 1264.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.74;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1293,132,0 chr1 94536434 . C T 201.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=28.83;ReadPosRankSum=-0.180;SOR=2.584 GT:AD:DP:GQ:PL 0/1:1,6:7:21:230,0,21 chr1 94540090 . C T 132.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.30;ReadPosRankSum=1.563;SOR=0.223 GT:AD:DP:GQ:PL 0/1:11,5:16:99:161,0,411 chr1 94560734 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 94560770 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 94561619 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 94599554 . G C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 94607350 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 94684144 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 94684764 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 94684786 . C A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:81,0,33 chr1 94723674 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 94725560 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 94745969 . G A 2399.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.095;ClippingRankSum=0.000;DP=209;ExcessHet=3.0103;FS=2.436;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.48;ReadPosRankSum=0.042;SOR=0.900 GT:AD:DP:GQ:PL 0/1:117,92:209:99:2428,0,3267 chr1 94776514 . A G 57.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:85,9,0 chr1 94820331 . C G 287.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.157;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.99;ReadPosRankSum=1.306;SOR=1.022 GT:AD:DP:GQ:PL 0/1:7,9:16:99:316,0,267 chr1 94820529 . G A 609.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.472;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.70;ReadPosRankSum=-0.648;SOR=0.795 GT:AD:DP:GQ:PL 0/1:30,27:57:99:638,0,703 chr1 94820538 . G T 2002.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.54;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,55:55:99:2031,168,0 chr1 94821102 . C A 1399.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.601;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=0.651;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.14;ReadPosRankSum=1.250;SOR=0.780 GT:AD:DP:GQ:PL 0/1:82,56:138:99:1428,0,2395 chr1 94824447 . C T 859.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.447;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.83;ReadPosRankSum=-2.032;SOR=0.809 GT:AD:DP:GQ:PL 0/1:36,31:67:99:888,0,1096 chr1 94824749 . T C 1489.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.65;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1518,111,0 chr1 94824759 . A G 534.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.273;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.85;ReadPosRankSum=-0.233;SOR=0.693 GT:AD:DP:GQ:PL 0/1:18,18:36:99:563,0,575 chr1 94825520 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.524;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 94825810 . A G 6154.77 PASS AC=2;AF=1.00;AN=2;DP=184;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.45;SOR=1.130 GT:AD:DP:GQ:PL 1/1:0,184:184:99:6183,552,0 chr1 94825923 . A C 2135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.147;ClippingRankSum=0.000;DP=165;ExcessHet=3.0103;FS=0.604;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.02;ReadPosRankSum=-1.206;SOR=0.765 GT:AD:DP:GQ:PL 0/1:83,81:164:99:2164,0,2203 chr1 94827449 . A G 1927.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.037;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=0.577;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.42;ReadPosRankSum=-0.412;SOR=0.638 GT:AD:DP:GQ:PL 0/1:109,76:185:99:1956,0,3045 chr1 94828533 . T C 2051.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.309;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=12.223;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.68;ReadPosRankSum=0.193;SOR=0.232 GT:AD:DP:GQ:PL 0/1:65,85:150:99:2080,0,1684 chr1 94839668 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 94839884 . A G 2548.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=1.193 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2577,243,0 chr1 94842286 . T C 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.26;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr1 94843363 . C A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 94864816 . G A 3499.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.31;SOR=1.728 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3528,306,0 chr1 94867258 . C T 570.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.235;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=5.990;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.85;ReadPosRankSum=1.565;SOR=0.150 GT:AD:DP:GQ:PL 0/1:15,21:36:99:599,0,450 chr1 94867308 . C T 697.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.444;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.42;ReadPosRankSum=0.867;SOR=0.720 GT:AD:DP:GQ:PL 0/1:27,25:52:99:726,0,789 chr1 94867512 . G T 396.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.335;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=1.295;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.44;ReadPosRankSum=-1.552;SOR=0.990 GT:AD:DP:GQ:PL 0/1:31,16:47:99:425,0,846 chr1 94867639 . G A 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 94867674 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 94892540 . A G 903.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.921;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=4.273;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.14;ReadPosRankSum=0.930;SOR=1.477 GT:AD:DP:GQ:PL 0/1:25,31:56:99:932,0,671 chr1 94894725 . G A 465.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.394;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.53;ReadPosRankSum=-0.345;SOR=1.508 GT:AD:DP:GQ:PL 0/1:16,14:30:99:494,0,544 chr1 94901580 . G A 591.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.88;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,18:18:54:620,54,0 chr1 94902093 . T C 1313.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.554;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=9.167;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.84;ReadPosRankSum=0.341;SOR=0.249 GT:AD:DP:GQ:PL 0/1:60,51:111:99:1342,0,1696 chr1 94902338 . A C 719.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,22:22:66:748,66,0 chr1 94902902 . G A 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.85;ReadPosRankSum=0.921;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,2:8:59:59,0,227 chr1 94903655 . T G 2352.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.68;SOR=1.675 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2381,216,0 chr1 94921306 . A C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 94927037 . C T 758.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.047;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=-1.143;SOR=0.854 GT:AD:DP:GQ:PL 0/1:36,24:60:99:787,0,1254 chr1 94962858 . G A 686.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.176;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=3.137;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.49;ReadPosRankSum=-1.182;SOR=1.410 GT:AD:DP:GQ:PL 0/1:31,24:55:99:715,0,860 chr1 94983477 . T C 1444.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.84;SOR=2.007 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1473,132,0 chr1 95039016 . C T 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr1 95073061 . C G 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=0.666;SOR=0.495 GT:AD:DP:GQ:PL 0/1:9,7:16:99:244,0,328 chr1 95104463 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 95234038 . A G 711.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.75;SOR=2.049 GT:AD:DP:GQ:PL 1/1:0,16:16:51:740,51,0 chr1 95234048 . G C 711.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.80;SOR=2.179 GT:AD:DP:GQ:PL 1/1:0,17:17:51:740,51,0 chr1 95240059 . G A 1353.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.29;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1382,114,0 chr1 95244265 . T C 4048.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.65;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,124:124:99:4077,372,0 chr1 95244383 . T G 3611.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.40;SOR=1.064 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3640,315,0 chr1 95339326 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 95365664 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 95669586 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 95786336 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 95853537 . C A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 96022618 . A G 2842.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.133;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.92;ReadPosRankSum=1.779;SOR=0.758 GT:AD:DP:GQ:PL 1/1:2,93:95:99:2871,235,0 chr1 96022705 . A T 1651.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.17;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1680,159,0 chr1 96207645 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 96207844 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 96224399 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.71;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 96224401 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.98;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 96327761 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 96327768 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 96359420 . T A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 96369843 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 96440186 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 96440431 . A G 49.31 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.44;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:1:75,0,1 chr1 96447103 . A G 490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.066;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.84;MQRankSum=-0.559;QD=15.34;ReadPosRankSum=0.958;SOR=0.644 GT:AD:DP:GQ:PL 0/1:14,18:32:99:519,0,386 chr1 96448209 . A G 434.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.78;QD=33.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:39:463,39,0 chr1 96466430 . G T 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 96486976 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 96486978 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 96723535 . G A 1125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.121;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=1.524;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.79;ReadPosRankSum=-1.843;SOR=0.536 GT:AD:DP:GQ:PL 0/1:63,52:115:99:1154,0,1762 chr1 96723732 . T A 328.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.44;ReadPosRankSum=1.352;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,10:20:99:357,0,357 chr1 96730082 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 96730094 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 96751623 . G C 279.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.649;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=6.410;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.32;ReadPosRankSum=-0.250;SOR=0.061 GT:AD:DP:GQ:PL 0/1:9,12:21:99:308,0,311 chr1 96770574 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 96777467 . A G 284.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.56;ReadPosRankSum=-2.078;SOR=0.113 GT:AD:DP:GQ:PL 0/1:12,9:21:99:313,0,438 chr1 96784964 . G T 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-1.501;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr1 96813248 . G A 613.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.377;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=6.250;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=0.449;SOR=0.855 GT:AD:DP:GQ:PL 0/1:24,22:46:99:642,0,693 chr1 96832620 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 96919698 . C T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 97021493 . C A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 97044770 . G A 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 97079215 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.65;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 97082275 . G A 618.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.57;SOR=2.419 GT:AD:DP:GQ:PL 1/1:0,19:19:57:647,57,0 chr1 97280209 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 97306391 . C A 164.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.550;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.67;ReadPosRankSum=1.471;SOR=1.402 GT:AD:DP:GQ:PL 0/1:13,6:19:99:193,0,418 chr1 97515686 . T C 256.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.10;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:285,24,0 chr1 97788110 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 97788182 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 97883329 . A G 903.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.929;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=9.196;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.02;ReadPosRankSum=-0.315;SOR=0.808 GT:AD:DP:GQ:PL 0/1:44,38:82:99:932,0,1047 chr1 97921165 . C T 337.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.315;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=3.854;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.87;ReadPosRankSum=0.848;SOR=2.387 GT:AD:DP:GQ:PL 0/1:7,10:17:99:366,0,229 chr1 98036603 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 98661836 . T C 628.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.09;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,19:19:57:657,57,0 chr1 98663003 . C G 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.335;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=-0.605;SOR=2.179 GT:AD:DP:GQ:PL 0/1:5,6:11:99:218,0,142 chr1 98685079 . G A 868.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.03;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,28:28:84:897,84,0 chr1 98698878 . G A 763.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.721;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=2.041;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.61;ReadPosRankSum=-0.022;SOR=1.017 GT:AD:DP:GQ:PL 0/1:43,29:72:99:792,0,1107 chr1 98712691 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 98760071 . G A 1178.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.02;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1207,114,0 chr1 98781999 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 98794931 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 98892802 . G T 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.674;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 98956429 . G A 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=0.241;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr1 99078669 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 99078672 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 99085160 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 99123869 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 99146888 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 99161528 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 99195988 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 99300697 . C G 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=0.842;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr1 99305714 . C T 649.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.753;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.24;ReadPosRankSum=0.313;SOR=0.818 GT:AD:DP:GQ:PL 0/1:16,24:40:99:678,0,442 chr1 99550147 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 99605375 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 99646400 . A G 1387.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.445;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=1.695;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.61;ReadPosRankSum=0.398;SOR=0.973 GT:AD:DP:GQ:PL 0/1:51,51:102:99:1416,0,1268 chr1 99667954 . C T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 99686887 . T C 1995.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.72;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2024,182,0 chr1 99717328 . C T 355.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.198;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=2.182;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.18;ReadPosRankSum=1.309;SOR=1.483 GT:AD:DP:GQ:PL 0/1:15,12:27:99:384,0,508 chr1 99719726 . G T 185.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.48;ReadPosRankSum=0.908;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:214,0,214 chr1 99728340 . C T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:59:71,0,59 chr1 99728749 . C G 1401.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.48;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1430,120,0 chr1 99729406 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 99729458 . C T 461.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.98;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:33:490,33,0 chr1 99729461 . C G 461.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.88;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:490,33,0 chr1 99729921 . A G 104.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.01;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:132,12,0 chr1 99737945 . C T 681.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.81;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:710,51,0 chr1 99738015 . A G 1585.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.36;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1614,147,0 chr1 99738041 . G A 2186.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.16;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2215,204,0 chr1 99738092 . C T 3399.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=1.234 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3428,309,0 chr1 99738137 . G A 3693.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.78;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3722,360,0 chr1 99738443 . G A 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr1 99741109 . G C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 99744424 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 99747559 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.59;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 99748835 . T A 1020.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.65;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1049,78,0 chr1 99748931 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 99752904 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 99758827 . C G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 99758843 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.61;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr1 99851209 . C T 325.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.930;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=1.992;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.23;ReadPosRankSum=-0.668;SOR=0.264 GT:AD:DP:GQ:PL 0/1:16,13:29:99:354,0,501 chr1 99864333 . G C 1286.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.019;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.38;ReadPosRankSum=0.144;SOR=0.568 GT:AD:DP:GQ:PL 0/1:23,47:70:99:1315,0,588 chr1 99864681 . A G 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.589;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.75;ReadPosRankSum=1.981;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:170,0,140 chr1 99864739 . T C 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.35;ReadPosRankSum=-1.036;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:105,0,68 chr1 99870421 . A G 1761.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.130;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=6.950;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=0.021;SOR=0.327 GT:AD:DP:GQ:PL 0/1:54,71:125:99:1790,0,1357 chr1 99870805 . C T 501.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.410;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.192;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.15;ReadPosRankSum=-0.819;SOR=1.085 GT:AD:DP:GQ:PL 0/1:25,20:45:99:530,0,671 chr1 99874669 . G A 1018.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.246;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=2.080;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.76;ReadPosRankSum=-1.046;SOR=1.008 GT:AD:DP:GQ:PL 0/1:30,39:69:99:1047,0,773 chr1 100015152 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 100068404 . G A 584.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.017;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.62;ReadPosRankSum=0.067;SOR=0.452 GT:AD:DP:GQ:PL 0/1:20,20:40:99:613,0,613 chr1 100103203 . C G 484.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.268;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.20;ReadPosRankSum=-0.168;SOR=0.340 GT:AD:DP:GQ:PL 0/1:10,14:24:99:513,0,329 chr1 100110377 . G A 1961.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.019;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=0.658;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.91;ReadPosRankSum=0.722;SOR=0.597 GT:AD:DP:GQ:PL 0/1:70,71:141:99:1990,0,1950 chr1 100121694 . A C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 100133310 . G A 5798.77 PASS AC=2;AF=1.00;AN=2;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.77;SOR=2.045 GT:AD:DP:GQ:PL 1/1:0,131:131:99:5827,394,0 chr1 100133311 . C T 5798.77 PASS AC=2;AF=1.00;AN=2;DP=126;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.46;SOR=2.087 GT:AD:DP:GQ:PL 1/1:0,126:126:99:5827,394,0 chr1 100152331 . C T 1331.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.15;SOR=2.133 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1360,117,0 chr1 100206310 . T A 1074.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.225;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=-0.500;SOR=0.800 GT:AD:DP:GQ:PL 0/1:42,41:83:99:1112,0,1044 chr1 100206504 . T C 4724.77 PASS AC=2;AF=1.00;AN=2;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.58;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,145:145:99:4753,434,0 chr1 100238422 . T C 286.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.24;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:315,21,0 chr1 100249898 . G A 2690.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.036;ClippingRankSum=0.000;DP=220;ExcessHet=3.0103;FS=3.530;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.23;ReadPosRankSum=0.442;SOR=1.003 GT:AD:DP:GQ:PL 0/1:123,97:220:99:2719,0,3609 chr1 100266264 . G A 703.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.741;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=6.283;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.17;ReadPosRankSum=-0.628;SOR=2.833 GT:AD:DP:GQ:PL 0/1:22,19:41:99:732,0,1439 chr1 100267996 . T C 481.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.277;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.84;ReadPosRankSum=-0.938;SOR=0.941 GT:AD:DP:GQ:PL 0/1:12,15:27:99:510,0,385 chr1 100275138 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 100277114 . A G 436.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.740;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.85;ReadPosRankSum=0.365;SOR=1.085 GT:AD:DP:GQ:PL 0/1:9,13:22:99:465,0,310 chr1 100277522 . A G 221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.84;ReadPosRankSum=0.980;SOR=0.693 GT:AD:DP:GQ:PL 0/1:7,7:14:99:250,0,249 chr1 100285499 . G C 496.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.84;ReadPosRankSum=1.677;SOR=1.721 GT:AD:DP:GQ:PL 0/1:6,14:20:99:525,0,190 chr1 100287385 . G A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-0.189;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,102 chr1 100292207 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 100297761 . G C 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr1 100319120 . G T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 100327773 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 100352622 . G C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 100352730 . A T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 100352908 . T C 3787.77 PASS AC=2;AF=1.00;AN=2;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.79;SOR=1.374 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3816,369,0 chr1 100353717 . T C 1027.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.745;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=0.717;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.26;ReadPosRankSum=0.016;SOR=0.614 GT:AD:DP:GQ:PL 0/1:66,45:111:99:1056,0,1636 chr1 100391091 . A T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 100406948 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 100406968 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 100442768 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 100443021 . A T 123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.661;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.16;ReadPosRankSum=-0.167;SOR=0.818 GT:AD:DP:GQ:PL 0/1:17,7:24:99:152,0,474 chr1 100455302 . A G 164.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.981;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.67;ReadPosRankSum=1.754;SOR=1.402 GT:AD:DP:GQ:PL 0/1:13,6:19:99:193,0,394 chr1 100455634 . A G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 100467832 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 100484304 . G A 1003.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.702;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.94;ReadPosRankSum=0.239;SOR=0.681 GT:AD:DP:GQ:PL 0/1:30,42:72:99:1032,0,749 chr1 100495863 . A G 582.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.73;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:611,45,0 chr1 100497862 . T G 904.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.51;SOR=2.387 GT:AD:DP:GQ:PL 1/1:0,27:27:81:933,81,0 chr1 100518067 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.17;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 100518536 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 100526078 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 100526093 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 100539534 . G A 3867.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3896,350,0 chr1 100556556 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 100638043 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.70;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 100638086 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.70;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 100652128 . A T 237.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.78;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:30:266,30,0 chr1 100669318 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 100669321 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 100723471 . C G 1026.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.00;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1055,84,0 chr1 100724617 . C T 2006.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=2.107 GT:AD:DP:GQ:PL 1/1:0,57:57:99:2035,170,0 chr1 100731456 . A G 1290.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.932;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=8.070;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.44;ReadPosRankSum=-0.414;SOR=1.915 GT:AD:DP:GQ:PL 0/1:29,41:70:99:1319,0,761 chr1 100731627 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:72,0,71 chr1 100734423 . A G 681.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.59;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:710,51,0 chr1 100738142 . C T 1015.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.370;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.330;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.17;ReadPosRankSum=0.060;SOR=1.085 GT:AD:DP:GQ:PL 0/1:19,34:53:99:1044,0,498 chr1 100738271 . G A 3325.77 PASS AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.29;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3354,309,0 chr1 100746700 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 100874578 . C T 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-0.566;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 100876941 . T C 509.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.97;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:538,42,0 chr1 100878473 . A G 1780.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.381;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=0.635;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.81;ReadPosRankSum=0.070;SOR=0.621 GT:AD:DP:GQ:PL 0/1:65,74:139:99:1809,0,1683 chr1 100895128 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 100896815 . C A 777.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.139;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.96;ReadPosRankSum=-2.397;SOR=0.551 GT:AD:DP:GQ:PL 0/1:28,24:52:99:806,0,973 chr1 100907051 . C A 639.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.34;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:668,48,0 chr1 100912289 . A G 479.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.611;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=1.624;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.54;ReadPosRankSum=-0.886;SOR=1.125 GT:AD:DP:GQ:PL 0/1:16,17:33:99:508,0,501 chr1 101132373 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 101209221 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 101209227 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 101209397 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 101209398 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 101238976 . G T 1448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.660;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=1.983;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=0.150;SOR=0.478 GT:AD:DP:GQ:PL 0/1:57,51:108:99:1477,0,1757 chr1 101239021 . C G 2449.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.310;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=2.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.31;ReadPosRankSum=-0.991;SOR=0.519 GT:AD:DP:GQ:PL 0/1:95,89:184:99:2478,0,2526 chr1 101286328 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 101337034 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 101337121 . C A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 101573886 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 101573890 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 101573891 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 101787234 . C T 519.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.286;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=3.035;MLEAC=1;MLEAF=0.500;MQ=59.36;MQRankSum=0.322;QD=13.33;ReadPosRankSum=-0.620;SOR=0.330 GT:AD:DP:GQ:PL 0/1:18,21:39:99:548,0,520 chr1 101805876 . T C 84.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.150;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.21;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:18:113,0,18 chr1 101806218 . G A 1821.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.234;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.23;ReadPosRankSum=1.364;SOR=0.721 GT:AD:DP:GQ:PL 0/1:59,69:128:99:1850,0,1637 chr1 101808392 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 101812759 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 101945475 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 102111465 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 102296395 . A C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 102369950 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 102369954 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 102529617 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 102666012 . G T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 102888559 . T C 1134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.865;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=8.305;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.21;ReadPosRankSum=-1.439;SOR=1.527 GT:AD:DP:GQ:PL 0/1:31,39:70:99:1163,0,759 chr1 102888582 . A G 736.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.466;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=1.920;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.57;ReadPosRankSum=0.863;SOR=0.481 GT:AD:DP:GQ:PL 0/1:45,32:77:99:765,0,1335 chr1 102890551 . A G 296.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.844;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.37;ReadPosRankSum=0.949;SOR=0.693 GT:AD:DP:GQ:PL 0/1:12,12:24:99:325,0,292 chr1 102913448 . A C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.842;SOR=0.061 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 102914314 . A C 619.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=2.675;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=-0.635;SOR=1.179 GT:AD:DP:GQ:PL 0/1:16,28:44:99:648,0,315 chr1 102914837 . G A 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.539;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.03;ReadPosRankSum=1.171;SOR=0.770 GT:AD:DP:GQ:PL 0/1:15,7:22:99:117,0,536 chr1 102915573 . C T 333.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.135;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=1.456;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.34;ReadPosRankSum=-0.385;SOR=1.105 GT:AD:DP:GQ:PL 0/1:26,14:40:99:362,0,693 chr1 102920097 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 102920704 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 102934758 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 102934843 . C T 231.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.45;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:260,18,0 chr1 102934935 . G A 1501.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.88;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1530,102,0 chr1 102934936 . A T 1501.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.79;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1530,102,0 chr1 102938828 . T C 65.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:93,9,0 chr1 102940237 . G A 235.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.203;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.72;ReadPosRankSum=0.605;SOR=1.179 GT:AD:DP:GQ:PL 0/1:6,9:15:99:264,0,172 chr1 102961825 . A G 689.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.120;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.10;ReadPosRankSum=-0.205;SOR=0.650 GT:AD:DP:GQ:PL 0/1:30,27:57:99:718,0,809 chr1 102962833 . G A 1130.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.27;SOR=2.517 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1159,99,0 chr1 102970070 . G A 269.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.72;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:298,24,0 chr1 102970379 . T C 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.38;ReadPosRankSum=-0.493;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,8:10:53:292,0,53 chr1 102974941 . A G 617.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.473;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.206;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.87;ReadPosRankSum=0.541;SOR=0.445 GT:AD:DP:GQ:PL 0/1:25,23:48:99:646,0,684 chr1 102978569 . A C 77.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.55;ReadPosRankSum=-0.524;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:106,0,68 chr1 102978941 . A G 857.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.076;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=2.048;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.61;ReadPosRankSum=-0.062;SOR=0.446 GT:AD:DP:GQ:PL 0/1:37,31:68:99:886,0,1010 chr1 102979123 . T G 732.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.095;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=0.349;SOR=0.760 GT:AD:DP:GQ:PL 0/1:30,29:59:99:761,0,814 chr1 102979667 . G A 251.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.016;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=1.871;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.25;ReadPosRankSum=-0.743;SOR=1.329 GT:AD:DP:GQ:PL 0/1:9,10:19:99:280,0,217 chr1 102984042 . G C 335.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.04;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:364,27,0 chr1 102987823 . G C 245.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.94;ReadPosRankSum=-0.287;SOR=0.446 GT:AD:DP:GQ:PL 0/1:11,8:19:99:274,0,399 chr1 102989661 . C T 175.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.440;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.76;ReadPosRankSum=-0.515;SOR=0.340 GT:AD:DP:GQ:PL 0/1:11,7:18:99:204,0,371 chr1 102995952 . T A 1080.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.88;SOR=1.675 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1109,105,0 chr1 102996917 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.99;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 102996991 . G A 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.116;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.69;ReadPosRankSum=0.541;SOR=1.022 GT:AD:DP:GQ:PL 0/1:9,8:17:99:176,0,223 chr1 102998420 . G T 1090.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.09;SOR=2.765 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1119,96,0 chr1 102998505 . T A 110.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.31;ReadPosRankSum=-0.040;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:139,0,182 chr1 103002059 . C T 1140.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.55;SOR=2.899 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1169,101,0 chr1 103002739 . C T 323.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.874;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=0.784;SOR=0.818 GT:AD:DP:GQ:PL 0/1:14,15:29:99:352,0,361 chr1 103003053 . A G 1450.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.74;SOR=2.356 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1479,129,0 chr1 103004635 . T C 1577.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.775;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.788;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.78;ReadPosRankSum=-1.609;SOR=0.563 GT:AD:DP:GQ:PL 0/1:39,55:94:99:1606,0,1176 chr1 103012263 . A G 398.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.547;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.95;ReadPosRankSum=-1.307;SOR=0.776 GT:AD:DP:GQ:PL 0/1:12,13:25:99:427,0,376 chr1 103017664 . A T 115.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.473;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.52;ReadPosRankSum=-0.759;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:144,0,206 chr1 103017958 . C T 1663.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.26;SOR=3.865 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1692,135,0 chr1 103025683 . A C 432.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.499;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=6.455;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.64;ReadPosRankSum=-1.627;SOR=2.120 GT:AD:DP:GQ:PL 0/1:13,13:26:99:461,0,427 chr1 103031064 . G T 1764.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.51;SOR=1.199 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1793,168,0 chr1 103055898 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 103082763 . C G 1078.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.35;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1107,90,0 chr1 103107991 . G A 2136.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.42;SOR=1.542 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2165,203,0 chr1 103147798 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 103147800 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 103270753 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 103270792 . T G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.31;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 103270797 . G T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 103375436 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 103433089 . G A 563.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.725;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=1.114;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.84;ReadPosRankSum=-0.780;SOR=0.495 GT:AD:DP:GQ:PL 0/1:28,24:52:99:592,0,775 chr1 103447137 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 103535612 . G A 137.85 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.150;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.23;ReadPosRankSum=1.150;SOR=0.330 GT:AD:DP:GQ:PL 0/1:1,7:8:17:166,0,17 chr1 103536367 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.66;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 103537547 . G C 1523.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.13;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1552,138,0 chr1 103541604 . A G 644.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.70;SOR=1.828 GT:AD:DP:GQ:PL 1/1:0,21:21:63:673,63,0 chr1 103543523 . A G 902.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.24;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,28:28:84:931,84,0 chr1 103547151 . C G 88.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:116,12,0 chr1 103573791 . T C 912.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.436;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.06;MQRankSum=-1.835;QD=17.55;ReadPosRankSum=0.761;SOR=0.549 GT:AD:DP:GQ:PL 0/1:17,35:52:99:941,0,403 chr1 103573943 . A T 731.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.060;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=2.310;MLEAC=1;MLEAF=0.500;MQ=56.73;MQRankSum=1.833;QD=13.30;ReadPosRankSum=0.944;SOR=0.397 GT:AD:DP:GQ:PL 0/1:27,28:55:99:760,0,738 chr1 103574200 . T C 204.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.881;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.831;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.24;ReadPosRankSum=2.102;SOR=1.609 GT:AD:DP:GQ:PL 0/1:13,7:20:99:233,0,368 chr1 103575754 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 103713856 . T A 221.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=29.16;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:250,18,0 chr1 103926558 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 103944651 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 103944652 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 104011860 . G A 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr1 104073253 . A G 536.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.156;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=4.661;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.42;ReadPosRankSum=-1.144;SOR=0.238 GT:AD:DP:GQ:PL 0/1:26,21:47:99:565,0,808 chr1 104073337 . A G 1018.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.447;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.787;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.84;ReadPosRankSum=-0.084;SOR=0.848 GT:AD:DP:GQ:PL 0/1:52,42:94:99:1047,0,1329 chr1 104073567 . A G 268.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.533;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=10.263;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=-1.300;SOR=0.025 GT:AD:DP:GQ:PL 0/1:9,11:20:99:297,0,316 chr1 104074550 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 104198732 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 104244261 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 104244270 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 104273280 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 104578959 . A G 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr1 104614833 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 104776345 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 104776362 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 104959473 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 104959483 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 104963893 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 104963908 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 105120343 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 105195241 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 105195245 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 105285125 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 105310678 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 105310696 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 105761933 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 105892749 . T C 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.803;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=0.497;SOR=0.892 GT:AD:DP:GQ:PL 0/1:6,4:10:99:137,0,152 chr1 105893150 . T G 216.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.223;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=1.719;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.32;ReadPosRankSum=-0.904;SOR=0.368 GT:AD:DP:GQ:PL 0/1:12,9:21:99:245,0,290 chr1 106080692 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 106080847 . G C 501.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.479;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=1.757;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.30;ReadPosRankSum=0.216;SOR=0.346 GT:AD:DP:GQ:PL 0/1:9,17:26:99:530,0,230 chr1 106080940 . A T 648.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.212;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=1.164;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.09;ReadPosRankSum=-0.249;SOR=0.527 GT:AD:DP:GQ:PL 0/1:18,25:43:99:677,0,457 chr1 106303035 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 106303036 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 106731048 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.524;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:61:68,0,61 chr1 106947880 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 106947932 . A C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 106951159 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 107069604 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 107094223 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 107310871 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 107325095 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 107403640 . G A 204.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.863;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.473;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.24;ReadPosRankSum=0.038;SOR=0.211 GT:AD:DP:GQ:PL 0/1:11,9:20:99:233,0,349 chr1 107404028 . G T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 107436774 . A C 2866.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.85;SOR=1.364 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2895,270,0 chr1 107460142 . C A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 107480967 . A C 1084.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.244;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.853;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.23;ReadPosRankSum=0.265;SOR=0.859 GT:AD:DP:GQ:PL 0/1:39,43:82:99:1113,0,962 chr1 107505203 . A C 235.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.496;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=1.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.61;ReadPosRankSum=0.081;SOR=0.721 GT:AD:DP:GQ:PL 0/1:20,11:31:99:264,0,470 chr1 107596381 . C T 668.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.257;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=1.631;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.07;ReadPosRankSum=0.000;SOR=0.428 GT:AD:DP:GQ:PL 0/1:14,23:37:99:697,0,389 chr1 107609609 . G T 113.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.335;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.34;ReadPosRankSum=1.180;SOR=0.120 GT:AD:DP:GQ:PL 0/1:6,5:11:99:142,0,218 chr1 107609710 . T A 503.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.299;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=3.330;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.92;ReadPosRankSum=-1.576;SOR=0.236 GT:AD:DP:GQ:PL 0/1:21,18:39:99:532,0,658 chr1 107610008 . G T 452.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.024;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.09;ReadPosRankSum=0.103;SOR=0.483 GT:AD:DP:GQ:PL 0/1:13,17:30:99:481,0,351 chr1 107630345 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 107683156 . G C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 107704426 . A G 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=-0.812;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,224 chr1 107729973 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 107749638 . A G 947.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.68;SOR=2.226 GT:AD:DP:GQ:PL 1/1:0,29:29:86:976,86,0 chr1 107757187 . G A 2074.73 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=3.841 GT:AD:DP:GQ:PL 1/1:0,54:54:99:2112,162,0 chr1 107761064 . C T 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=0.792;SOR=0.223 GT:AD:DP:GQ:PL 0/1:3,4:7:99:112,0,104 chr1 107765020 . C T 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.047;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.91;ReadPosRankSum=-1.731;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,4:14:99:125,0,342 chr1 107765105 . T A 345.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.203;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.86;ReadPosRankSum=0.825;SOR=0.596 GT:AD:DP:GQ:PL 0/1:27,17:44:99:374,0,757 chr1 107770636 . C T 177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.244;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.73;ReadPosRankSum=-1.865;SOR=0.569 GT:AD:DP:GQ:PL 0/1:13,10:23:99:206,0,357 chr1 107772634 . G C 347.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.614;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=2.935;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.30;ReadPosRankSum=0.047;SOR=0.191 GT:AD:DP:GQ:PL 0/1:7,12:19:99:376,0,235 chr1 107772683 . C T 1041.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.76;SOR=1.675 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1070,105,0 chr1 107947953 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 107965014 . G A 458.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.96;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:487,36,0 chr1 108008338 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 108016707 . G C 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr1 108016793 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 108127567 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 108127570 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 108136910 . C T 701.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.945;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.398;SOR=0.573 GT:AD:DP:GQ:PL 0/1:24,21:45:99:730,0,810 chr1 108138978 . T C 755.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.735;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.984;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.35;ReadPosRankSum=-0.736;SOR=0.875 GT:AD:DP:GQ:PL 0/1:44,29:73:99:784,0,1144 chr1 108155223 . C G 547.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.587;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.26;ReadPosRankSum=-0.427;SOR=1.931 GT:AD:DP:GQ:PL 0/1:14,16:30:99:576,0,454 chr1 108157694 . G C 295.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.005;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=10.257;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.57;ReadPosRankSum=-0.345;SOR=2.395 GT:AD:DP:GQ:PL 0/1:32,13:45:99:324,0,740 chr1 108160843 . G A 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.645;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.85;MQRankSum=0.674;QD=16.35;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:110,0,34 chr1 108167647 . G A 32.79 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.70;MQRankSum=0.967;QD=10.93;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:23:61,0,23 chr1 108181896 . A G 1776.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.30;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1805,164,0 chr1 108182071 . G A 677.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.69;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,18:18:54:706,54,0 chr1 108182144 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 108185725 . T C 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:109,0,109 chr1 108185862 . T C 152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.079;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.99;ReadPosRankSum=-0.309;SOR=0.941 GT:AD:DP:GQ:PL 0/1:9,8:17:99:181,0,208 chr1 108199501 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 108199508 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 108200330 . G T 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.97;ReadPosRankSum=-0.319;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,6:8:59:180,0,59 chr1 108223511 . A G 289.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.764;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.76;MQRankSum=-0.924;QD=13.80;ReadPosRankSum=-0.044;SOR=0.368 GT:AD:DP:GQ:PL 0/1:10,11:21:99:318,0,310 chr1 108223802 . A G 340.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.074;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=1.664;MLEAC=1;MLEAF=0.500;MQ=54.48;MQRankSum=-0.241;QD=11.75;ReadPosRankSum=0.901;SOR=0.377 GT:AD:DP:GQ:PL 0/1:15,14:29:99:369,0,415 chr1 108347020 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 108600371 . A T 221.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.04;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:250,18,0 chr1 108612522 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 108628124 . C T 1651.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.08;SOR=2.511 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1680,138,0 chr1 108629971 . C T 131.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:159,12,0 chr1 108665875 . G C 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 108667373 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 108699047 . G A 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.531;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.963;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.91;ReadPosRankSum=-0.088;SOR=1.802 GT:AD:DP:GQ:PL 0/1:9,5:14:99:167,0,266 chr1 108712891 . G T 3830.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.89;SOR=1.392 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3859,371,0 chr1 108715528 . C T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 108715655 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 108715661 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 108715668 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 108715671 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 108717559 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 108717735 . G A 1078.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.749;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=6.595;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.54;ReadPosRankSum=1.487;SOR=1.559 GT:AD:DP:GQ:PL 0/1:49,37:86:99:1107,0,1312 chr1 108719228 . G A 455.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.851;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.23;ReadPosRankSum=1.139;SOR=1.230 GT:AD:DP:GQ:PL 0/1:10,15:25:99:484,0,260 chr1 108722407 . G T 1782.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.811;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.13;ReadPosRankSum=0.491;SOR=0.682 GT:AD:DP:GQ:PL 0/1:75,72:147:99:1811,0,2104 chr1 108722704 . G C 608.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.786;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=11.137;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.45;ReadPosRankSum=-1.640;SOR=0.040 GT:AD:DP:GQ:PL 0/1:11,22:33:99:637,0,360 chr1 108725951 . T C 1880.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.224;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=0.621;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=1.303;SOR=0.776 GT:AD:DP:GQ:PL 0/1:68,73:141:99:1909,0,1895 chr1 108727780 . G A 2487.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.010;ClippingRankSum=0.000;DP=188;ExcessHet=3.0103;FS=0.624;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.23;ReadPosRankSum=-0.218;SOR=0.806 GT:AD:DP:GQ:PL 0/1:100,88:188:99:2516,0,3065 chr1 108746731 . C G 157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.78;ReadPosRankSum=0.842;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,6:10:99:186,0,137 chr1 108746865 . C T 592.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.282;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.02;ReadPosRankSum=-0.321;SOR=0.683 GT:AD:DP:GQ:PL 0/1:14,23:37:99:621,0,325 chr1 108753349 . A G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.10;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 108756831 . C G 467.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.412;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=10.813;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.09;ReadPosRankSum=-0.888;SOR=3.169 GT:AD:DP:GQ:PL 0/1:16,15:31:99:496,0,427 chr1 108758628 . G C 323.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.535;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.99;ReadPosRankSum=-1.280;SOR=0.559 GT:AD:DP:GQ:PL 0/1:20,16:36:99:352,0,493 chr1 108772589 . A G 354.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.868;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=3.222;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.89;ReadPosRankSum=-0.770;SOR=1.911 GT:AD:DP:GQ:PL 0/1:10,11:21:99:383,0,320 chr1 108779202 . G T 372.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.525;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=2.044;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.07;ReadPosRankSum=0.080;SOR=0.299 GT:AD:DP:GQ:PL 0/1:23,14:37:99:401,0,769 chr1 108782406 . T C 878.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.387;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.04;ReadPosRankSum=1.113;SOR=0.582 GT:AD:DP:GQ:PL 0/1:38,35:73:99:907,0,1103 chr1 108793789 . G A 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=0.309;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,259 chr1 108794950 . A C 552.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.520;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.77;ReadPosRankSum=1.294;SOR=0.701 GT:AD:DP:GQ:PL 0/1:41,22:63:99:581,0,1114 chr1 108797982 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-1.383;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr1 108800094 . A G 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=0.944;SOR=0.160 GT:AD:DP:GQ:PL 0/1:5,5:10:99:167,0,179 chr1 108808879 . A G 765.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.457;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=8.416;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.15;ReadPosRankSum=-0.139;SOR=0.061 GT:AD:DP:GQ:PL 0/1:13,25:38:99:794,0,397 chr1 108816336 . T C 1145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.697;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=5.899;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.10;ReadPosRankSum=0.565;SOR=0.245 GT:AD:DP:GQ:PL 0/1:24,43:67:99:1174,0,651 chr1 108820453 . T C 922.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.913;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=1.013;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.42;ReadPosRankSum=-0.352;SOR=0.477 GT:AD:DP:GQ:PL 0/1:29,35:64:99:951,0,815 chr1 108820518 . T C 1091.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.381;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=5.566;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=0.538;SOR=1.312 GT:AD:DP:GQ:PL 0/1:42,43:85:99:1120,0,1058 chr1 108820610 . T C 715.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.023;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.76;ReadPosRankSum=1.053;SOR=0.856 GT:AD:DP:GQ:PL 0/1:28,24:52:99:744,0,826 chr1 108823664 . C T 1744.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.071;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=6.675;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.85;ReadPosRankSum=-0.467;SOR=1.234 GT:AD:DP:GQ:PL 0/1:64,62:126:99:1773,0,1851 chr1 108823748 . C T 1732.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.822;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=3.279;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.97;ReadPosRankSum=-1.152;SOR=0.454 GT:AD:DP:GQ:PL 0/1:60,64:124:99:1761,0,1540 chr1 108823932 . T C 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.48;ReadPosRankSum=-0.516;SOR=1.445 GT:AD:DP:GQ:PL 0/1:4,8:12:99:298,0,119 chr1 108827175 . T G 321.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.573;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=7.048;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.38;ReadPosRankSum=1.557;SOR=2.303 GT:AD:DP:GQ:PL 0/1:15,11:26:99:350,0,378 chr1 108827293 . G T 577.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.200;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=1.029;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.50;ReadPosRankSum=0.210;SOR=0.662 GT:AD:DP:GQ:PL 0/1:30,25:55:99:606,0,769 chr1 108830106 . A T 259.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.79;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:288,21,0 chr1 108830254 . G A 1851.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.29;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1880,162,0 chr1 108830346 . T G 4340.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.10;SOR=1.476 GT:AD:DP:GQ:PL 1/1:0,120:120:99:4369,361,0 chr1 108830824 . G A 700.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.65;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:729,54,0 chr1 108848864 . G A 2052.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.58;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2081,189,0 chr1 108849339 . T G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.86;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 108852483 . C T 3863.77 PASS AC=2;AF=1.00;AN=2;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,119:119:99:3892,357,0 chr1 108914529 . C T 594.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.05;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:623,45,0 chr1 108931184 . G A 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-0.180;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr1 108943574 . A G 3120.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.21;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3149,300,0 chr1 108947835 . T C 1486.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.05;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1515,159,0 chr1 108957817 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 108981962 . C A 1303.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.31;SOR=4.743 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1332,99,0 chr1 108992318 . G A 1742.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.12;QD=31.12;SOR=1.781 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1771,168,0 chr1 108999190 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 108999198 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 109002424 . C T 1383.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.80;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1412,114,0 chr1 109075635 . C T 1940.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.46;SOR=2.644 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1969,173,0 chr1 109075686 . G A 1473.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.182;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=3.939;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.17;ReadPosRankSum=-0.760;SOR=0.390 GT:AD:DP:GQ:PL 0/1:51,53:104:99:1502,0,1418 chr1 109090133 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 109090634 . C G 746.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.82;SOR=3.160 GT:AD:DP:GQ:PL 1/1:0,21:21:63:775,63,0 chr1 109091313 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 109092776 . A G 1177.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.70;SOR=3.477 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1206,93,0 chr1 109094607 . C G 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.566;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 109098637 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 109098651 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 109100758 . G C 2445.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.26;SOR=6.837 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2474,183,0 chr1 109103638 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 109106172 . A G 703.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.234;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=1.044;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.17;ReadPosRankSum=0.460;SOR=0.955 GT:AD:DP:GQ:PL 0/1:35,28:63:99:732,0,995 chr1 109106248 . C G 841.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.60;SOR=4.712 GT:AD:DP:GQ:PL 1/1:0,21:21:63:870,63,0 chr1 109106426 . T A 908.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.10;SOR=3.716 GT:AD:DP:GQ:PL 1/1:0,20:20:63:937,63,0 chr1 109106431 . T C 904.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.51;SOR=4.712 GT:AD:DP:GQ:PL 1/1:0,21:21:63:933,63,0 chr1 109107142 . C G 1117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.412;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.89;ReadPosRankSum=-0.037;SOR=0.719 GT:AD:DP:GQ:PL 0/1:48,46:94:99:1146,0,1287 chr1 109107764 . T C 388.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.857;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=-0.746;SOR=0.255 GT:AD:DP:GQ:PL 0/1:12,14:26:99:417,0,375 chr1 109112393 . A G 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=1.602;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:259,0,134 chr1 109113798 . T C 1207.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.90;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1236,96,0 chr1 109114324 . T C 7384.77 PASS AC=2;AF=1.00;AN=2;DP=220;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.57;SOR=1.098 GT:AD:DP:GQ:PL 1/1:0,220:220:99:7413,660,0 chr1 109114359 . T C 2507.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.789;ClippingRankSum=0.000;DP=193;ExcessHet=3.0103;FS=7.467;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=0.916;SOR=0.365 GT:AD:DP:GQ:PL 0/1:90,103:193:99:2536,0,2376 chr1 109114627 . C A 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.674;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 109137558 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 109154036 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 109161768 . C G 3917.77 PASS AC=2;AF=1.00;AN=2;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.77;SOR=2.183 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3946,348,0 chr1 109161996 . A G 5166.77 PASS AC=2;AF=1.00;AN=2;DP=157;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.91;SOR=1.798 GT:AD:DP:GQ:PL 1/1:0,157:157:99:5195,471,0 chr1 109165289 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 109171781 . C A 378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.112;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.94;ReadPosRankSum=-0.333;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,12:20:99:407,0,274 chr1 109172128 . T C 845.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.118;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=1.207;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.26;ReadPosRankSum=-0.507;SOR=0.479 GT:AD:DP:GQ:PL 0/1:20,32:52:99:874,0,543 chr1 109172297 . A G 308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.769;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=6.929;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.75;ReadPosRankSum=-1.352;SOR=3.056 GT:AD:DP:GQ:PL 0/1:4,9:13:94:337,0,94 chr1 109184853 . T C 1700.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.33;SOR=4.223 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1729,132,0 chr1 109184907 . G A 866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.601;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.70;ReadPosRankSum=-0.908;SOR=0.783 GT:AD:DP:GQ:PL 0/1:45,36:81:99:895,0,1247 chr1 109185210 . A G 688.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.835;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.40;ReadPosRankSum=1.350;SOR=1.089 GT:AD:DP:GQ:PL 0/1:21,21:42:99:717,0,636 chr1 109185258 . T C 446.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.222;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.87;ReadPosRankSum=0.256;SOR=0.293 GT:AD:DP:GQ:PL 0/1:11,14:25:99:475,0,384 chr1 109187889 . T C 233.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.38;ReadPosRankSum=1.331;SOR=1.863 GT:AD:DP:GQ:PL 0/1:3,7:10:95:262,0,95 chr1 109189458 . C T 693.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.297;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=2.752;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.52;ReadPosRankSum=-1.080;SOR=0.372 GT:AD:DP:GQ:PL 0/1:17,25:42:99:722,0,584 chr1 109191535 . T C 1219.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.305;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.43;ReadPosRankSum=-0.619;SOR=0.566 GT:AD:DP:GQ:PL 0/1:31,39:70:99:1248,0,1015 chr1 109191603 . G T 971.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.178;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=2.627;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.25;ReadPosRankSum=-1.184;SOR=0.317 GT:AD:DP:GQ:PL 0/1:20,28:48:99:1000,0,691 chr1 109191919 . C T 4226.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.09;SOR=2.341 GT:AD:DP:GQ:PL 1/1:0,124:124:99:4255,372,0 chr1 109192013 . T C 508.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.248;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.54;ReadPosRankSum=0.311;SOR=0.283 GT:AD:DP:GQ:PL 0/1:13,16:29:99:537,0,452 chr1 109192676 . T C 1504.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.562;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=2.734;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.84;ReadPosRankSum=0.673;SOR=0.492 GT:AD:DP:GQ:PL 0/1:40,55:95:99:1533,0,1108 chr1 109192794 . A C 1214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.220;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=4.353;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.64;ReadPosRankSum=0.471;SOR=0.939 GT:AD:DP:GQ:PL 0/1:75,51:126:99:1243,0,1983 chr1 109192882 . T C 572.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.844;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.88;ReadPosRankSum=-0.184;SOR=0.773 GT:AD:DP:GQ:PL 0/1:37,21:58:99:601,0,1110 chr1 109194441 . C T 1204.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.102;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=-0.270;SOR=0.665 GT:AD:DP:GQ:PL 0/1:47,46:93:99:1233,0,1275 chr1 109194468 . G A 1503.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.677;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=3.655;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.43;ReadPosRankSum=-1.114;SOR=0.419 GT:AD:DP:GQ:PL 0/1:61,60:121:99:1532,0,1768 chr1 109194510 . T C 1816.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.294;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=8.453;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.21;ReadPosRankSum=0.487;SOR=0.325 GT:AD:DP:GQ:PL 0/1:92,70:162:99:1845,0,2567 chr1 109194550 . C T 1723.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.900;ClippingRankSum=0.000;DP=178;ExcessHet=3.0103;FS=1.229;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.74;ReadPosRankSum=1.586;SOR=0.569 GT:AD:DP:GQ:PL 0/1:109,68:177:99:1752,0,2846 chr1 109194692 . T C 1518.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.083;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=4.338;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.08;ReadPosRankSum=0.818;SOR=0.264 GT:AD:DP:GQ:PL 0/1:44,40:84:99:1547,0,2980 chr1 109194698 . G A 1521.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.510;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=4.307;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.33;ReadPosRankSum=0.399;SOR=0.276 GT:AD:DP:GQ:PL 0/1:43,40:83:99:1550,0,2941 chr1 109197690 . T A 601.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.677;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.70;ReadPosRankSum=-0.361;SOR=0.540 GT:AD:DP:GQ:PL 0/1:12,22:34:99:630,0,420 chr1 109197742 . T G 307.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=-2.034;SOR=0.984 GT:AD:DP:GQ:PL 0/1:17,10:27:99:336,0,635 chr1 109197851 . C T 901.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.011;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=3.277;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.55;ReadPosRankSum=1.356;SOR=1.584 GT:AD:DP:GQ:PL 0/1:29,29:58:99:930,0,928 chr1 109197926 . G T 1933.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.328;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.22;ReadPosRankSum=-1.086;SOR=0.712 GT:AD:DP:GQ:PL 0/1:61,75:136:99:1962,0,1548 chr1 109198350 . C T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-1.150;SOR=0.991 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 109198894 . A C 639.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.43;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:668,48,0 chr1 109198908 . T C 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=1.316;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,215 chr1 109199830 . C T 917.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.876;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=2.112;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.00;ReadPosRankSum=-0.436;SOR=0.256 GT:AD:DP:GQ:PL 0/1:25,29:54:99:946,0,870 chr1 109199863 . G A 1872.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.522;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=3.880;MLEAC=1;MLEAF=0.500;MQ=59.84;MQRankSum=0.000;QD=16.72;ReadPosRankSum=0.530;SOR=1.311 GT:AD:DP:GQ:PL 0/1:54,58:112:99:1901,0,1622 chr1 109200500 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 109200545 . A C 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.91;ReadPosRankSum=-0.832;SOR=0.188 GT:AD:DP:GQ:PL 0/1:10,4:14:99:125,0,372 chr1 109202996 . T C 5979.77 PASS AC=2;AF=1.00;AN=2;DP=193;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.98;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,193:193:99:6008,579,0 chr1 109207343 . C T 104.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:132,12,0 chr1 109223624 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 109228441 . T C 5566.77 PASS AC=2;AF=1.00;AN=2;DP=180;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.10;SOR=1.191 GT:AD:DP:GQ:PL 1/1:0,179:179:99:5595,535,0 chr1 109229259 . G T 920.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=4.892 GT:AD:DP:GQ:PL 1/1:0,23:23:69:949,69,0 chr1 109231999 . C A 725.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.429;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.12;ReadPosRankSum=-0.303;SOR=0.793 GT:AD:DP:GQ:PL 0/1:23,25:48:99:754,0,715 chr1 109235955 . T C 3777.77 PASS AC=2;AF=1.00;AN=2;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.14;SOR=1.849 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3806,342,0 chr1 109236934 . T A 3616.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.91;SOR=0.978 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3645,351,0 chr1 109239599 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 109251630 . T C 14116.77 PASS AC=2;AF=1.00;AN=2;DP=414;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,412:412:99:14145,1238,0 chr1 109252404 . T C 16906.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.944;ClippingRankSum=0.000;DP=507;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=33.41;ReadPosRankSum=1.555;SOR=0.231 GT:AD:DP:GQ:PL 1/1:1,505:506:99:16935,1477,0 chr1 109252986 . T C 14111.77 PASS AC=2;AF=1.00;AN=2;DP=420;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.60;SOR=1.070 GT:AD:DP:GQ:PL 1/1:0,420:420:99:14140,1261,0 chr1 109263820 . C A 1420.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.780;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=1.914;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.65;ReadPosRankSum=0.395;SOR=0.454 GT:AD:DP:GQ:PL 0/1:48,49:97:99:1449,0,1460 chr1 109270888 . A T 472.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.564;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=1.293;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.06;ReadPosRankSum=-0.388;SOR=0.963 GT:AD:DP:GQ:PL 0/1:30,17:47:99:501,0,873 chr1 109271097 . C T 1726.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.991;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-0.390;SOR=0.721 GT:AD:DP:GQ:PL 0/1:69,70:139:99:1755,0,1847 chr1 109272452 . G A 1657.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.053;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.05;ReadPosRankSum=1.151;SOR=0.693 GT:AD:DP:GQ:PL 0/1:82,68:150:99:1686,0,2394 chr1 109272511 . G A 1542.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.815;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=1.497;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.65;ReadPosRankSum=-0.617;SOR=0.554 GT:AD:DP:GQ:PL 0/1:62,51:113:99:1571,0,1911 chr1 109272589 . C A 2632.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.924;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=0.627;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.16;ReadPosRankSum=0.360;SOR=0.768 GT:AD:DP:GQ:PL 0/1:76,69:145:99:2661,0,3028 chr1 109272630 . A G 2250.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.579;ClippingRankSum=0.000;DP=183;ExcessHet=3.0103;FS=2.591;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.37;ReadPosRankSum=0.092;SOR=0.516 GT:AD:DP:GQ:PL 0/1:95,87:182:99:2279,0,2629 chr1 109272746 . T C 3548.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.792;ClippingRankSum=0.000;DP=280;ExcessHet=3.0103;FS=7.285;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.67;ReadPosRankSum=-0.167;SOR=1.026 GT:AD:DP:GQ:PL 0/1:150,130:280:99:3577,0,4038 chr1 109273124 . A G 2683.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.200;ClippingRankSum=0.000;DP=201;ExcessHet=3.0103;FS=1.106;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.35;ReadPosRankSum=-2.002;SOR=0.607 GT:AD:DP:GQ:PL 0/1:102,99:201:99:2712,0,2828 chr1 109273554 . A C 9876.77 PASS AC=2;AF=1.00;AN=2;DP=307;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.38;SOR=1.271 GT:AD:DP:GQ:PL 1/1:0,305:305:99:9905,915,0 chr1 109275908 . C T 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:63,0,33 chr1 109278889 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 109282969 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 109284723 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 109294213 . A G 4783.77 PASS AC=2;AF=1.00;AN=2;DP=157;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.47;SOR=1.094 GT:AD:DP:GQ:PL 1/1:0,157:157:99:4812,470,0 chr1 109295494 . C T 1483.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.66;SOR=3.967 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1512,117,0 chr1 109295972 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 109296211 . T C 5081.77 PASS AC=2;AF=1.00;AN=2;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.22;SOR=3.678 GT:AD:DP:GQ:PL 1/1:0,135:135:99:5110,405,0 chr1 109296296 . C T 9964.77 PASS AC=2;AF=1.00;AN=2;DP=338;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.57;SOR=0.893 GT:AD:DP:GQ:PL 1/1:0,337:337:99:9993,1009,0 chr1 109296770 . A G 4811.77 PASS AC=2;AF=1.00;AN=2;DP=142;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.89;SOR=1.931 GT:AD:DP:GQ:PL 1/1:0,142:142:99:4840,427,0 chr1 109296811 . A G 6790.77 PASS AC=2;AF=1.00;AN=2;DP=216;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.44;SOR=1.184 GT:AD:DP:GQ:PL 1/1:0,216:216:99:6819,648,0 chr1 109297274 . C T 1247.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.318;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=1.692;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.27;ReadPosRankSum=0.402;SOR=0.523 GT:AD:DP:GQ:PL 0/1:46,48:94:99:1276,0,1196 chr1 109297332 . G C 2036.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.21;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,54:54:99:2065,162,0 chr1 109298296 . C T 3094.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.953;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=3.585;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.19;ReadPosRankSum=-1.853;SOR=0.740 GT:AD:DP:GQ:PL 0/1:64,116:180:99:3123,0,1652 chr1 109325270 . A G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-1.036;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 109325307 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 109342153 . T G 732.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.505;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=11.595;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.66;ReadPosRankSum=-0.627;SOR=0.100 GT:AD:DP:GQ:PL 0/1:20,30:50:99:761,0,583 chr1 109354481 . A G 2635.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.083;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=4.504;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.41;ReadPosRankSum=0.965;SOR=1.023 GT:AD:DP:GQ:PL 0/1:71,100:171:99:2664,0,1735 chr1 109367391 . C T 552.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.822;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.77;ReadPosRankSum=-1.189;SOR=0.668 GT:AD:DP:GQ:PL 0/1:38,25:63:99:581,0,921 chr1 109410270 . G A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 109412388 . C A 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=-0.389;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:256,0,172 chr1 109415413 . T C 635.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.599;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.14;ReadPosRankSum=0.349;SOR=0.787 GT:AD:DP:GQ:PL 0/1:19,23:42:99:664,0,492 chr1 109419811 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 109419818 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 109466812 . A C 703.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.640;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.094;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.73;ReadPosRankSum=-1.401;SOR=0.506 GT:AD:DP:GQ:PL 0/1:34,26:60:99:732,0,913 chr1 109475526 . C T 6547.77 PASS AC=2;AF=1.00;AN=2;DP=187;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.24;SOR=2.367 GT:AD:DP:GQ:PL 1/1:0,187:187:99:6576,562,0 chr1 109479215 . T C 629.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.32;ReadPosRankSum=-0.145;SOR=1.044 GT:AD:DP:GQ:PL 0/1:13,18:31:99:658,0,450 chr1 109480810 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 109483259 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 109486853 . C T 55.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.696;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.98;ReadPosRankSum=0.000;SOR=0.631 GT:AD:DP:GQ:PL 0/1:11,3:14:84:84,0,385 chr1 109488323 . A G 1754.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.468;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.45;ReadPosRankSum=0.245;SOR=0.687 GT:AD:DP:GQ:PL 0/1:79,62:141:99:1783,0,2108 chr1 109492537 . T C 971.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.065;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.57;ReadPosRankSum=2.499;SOR=0.613 GT:AD:DP:GQ:PL 0/1:43,41:84:99:1000,0,1067 chr1 109494376 . G C 902.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.264;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.993;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=-0.389;SOR=0.845 GT:AD:DP:GQ:PL 0/1:35,32:67:99:931,0,1056 chr1 109494861 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 109495216 . T G 1195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.040;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=1.570;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.28;ReadPosRankSum=0.411;SOR=0.534 GT:AD:DP:GQ:PL 0/1:59,47:106:99:1224,0,1623 chr1 109544423 . T C 1360.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.431;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=1.360;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.64;ReadPosRankSum=0.014;SOR=1.179 GT:AD:DP:GQ:PL 0/1:30,43:73:99:1389,0,826 chr1 109575679 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 109606352 . C T 1080.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.126;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=0.762;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.70;ReadPosRankSum=1.028;SOR=0.783 GT:AD:DP:GQ:PL 0/1:63,38:101:99:1109,0,1688 chr1 109620454 . A G 1029.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.005;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=2.457;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.73;ReadPosRankSum=0.019;SOR=0.385 GT:AD:DP:GQ:PL 0/1:41,34:75:99:1058,0,1248 chr1 109626266 . C G 1415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.977;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.97;ReadPosRankSum=-0.653;SOR=0.673 GT:AD:DP:GQ:PL 0/1:72,57:129:99:1444,0,1822 chr1 109627335 . A G 3492.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.807;ClippingRankSum=0.000;DP=267;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.08;ReadPosRankSum=-0.151;SOR=0.710 GT:AD:DP:GQ:PL 0/1:138,129:267:99:3521,0,3900 chr1 109628274 . T C 4311.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.129;ClippingRankSum=0.000;DP=297;ExcessHet=3.0103;FS=3.818;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.57;ReadPosRankSum=-0.595;SOR=0.704 GT:AD:DP:GQ:PL 0/1:140,156:296:99:4340,0,3763 chr1 109629083 . A C 3690.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.536;ClippingRankSum=0.000;DP=265;ExcessHet=3.0103;FS=1.556;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.93;ReadPosRankSum=-0.130;SOR=0.823 GT:AD:DP:GQ:PL 0/1:130,135:265:99:3719,0,3359 chr1 109629740 . C T 1132.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.484;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=3.367;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.73;ReadPosRankSum=0.051;SOR=1.147 GT:AD:DP:GQ:PL 0/1:30,42:72:99:1161,0,935 chr1 109656105 . C G 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-1.006;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,142 chr1 109657738 . T C 6006.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.733;ClippingRankSum=0.000;DP=454;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=-0.450;SOR=0.688 GT:AD:DP:GQ:PL 0/1:241,212:453:99:6035,0,6946 chr1 109658958 . C T 11777.77 PASS AC=2;AF=1.00;AN=2;DP=379;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.08;SOR=1.231 GT:AD:DP:GQ:PL 1/1:0,379:379:99:11806,1136,0 chr1 109659077 . T C 3811.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.87;QD=31.97;SOR=2.160 GT:AD:DP:GQ:PL 1/1:0,96:96:99:3840,289,0 chr1 109659187 . G T 4442.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.24;QD=31.87;SOR=0.969 GT:AD:DP:GQ:PL 1/1:0,96:96:99:4471,304,0 chr1 109659190 . A G 4484.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.50;QD=31.10;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,100:100:99:4513,307,0 chr1 109664860 . C T 884.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.667;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=3.875;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.25;ReadPosRankSum=0.383;SOR=0.342 GT:AD:DP:GQ:PL 0/1:23,35:58:99:913,0,570 chr1 109668049 . G T 919.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.460;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.64;ReadPosRankSum=-1.877;SOR=0.654 GT:AD:DP:GQ:PL 0/1:41,38:79:99:948,0,1032 chr1 109668158 . C G 1664.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.64;SOR=1.565 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1693,153,0 chr1 109668196 . C T 492.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.536;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=3.012;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.08;ReadPosRankSum=0.334;SOR=0.658 GT:AD:DP:GQ:PL 0/1:15,20:35:99:521,0,326 chr1 109669059 . G C 606.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=6.003;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=43.747;MLEAC=1;MLEAF=0.500;MQ=48.10;MQRankSum=-9.295;QD=3.77;ReadPosRankSum=-0.707;SOR=5.549 GT:AD:DP:GQ:PL 0/1:133,28:161:99:635,0,3487 chr1 109669213 . T C 4368.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=9.649;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=33.637;MLEAC=2;MLEAF=1.00;MQ=43.65;MQRankSum=0.153;QD=36.94;ReadPosRankSum=-1.068;SOR=5.477 GT:AD:DP:GQ:PL 1/1:10,113:123:99:4397,123,0 chr1 109669334 . C T 5093.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.423;ClippingRankSum=0.000;DP=471;ExcessHet=3.0103;FS=3.374;MLEAC=1;MLEAF=0.500;MQ=58.63;MQRankSum=-3.054;QD=10.84;ReadPosRankSum=1.743;SOR=0.969 GT:AD:DP:GQ:PL 0/1:275,195:470:99:5122,0,7328 chr1 109669671 . C A 593.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.765;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=2.455;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.56;ReadPosRankSum=-0.093;SOR=1.670 GT:AD:DP:GQ:PL 0/1:14,18:32:99:622,0,372 chr1 109672545 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 109672546 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 109672556 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 109674419 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 109703351 . C G 128.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.46;ReadPosRankSum=-0.210;SOR=0.707 GT:AD:DP:GQ:PL 0/1:1,5:6:24:157,0,24 chr1 109703440 . C T 168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.085;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.75;ReadPosRankSum=1.150;SOR=0.941 GT:AD:DP:GQ:PL 0/1:2,7:9:56:197,0,56 chr1 109709388 . T C 1398.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.41;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1427,138,0 chr1 109709469 . G A 401.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.762;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.85;ReadPosRankSum=-1.527;SOR=1.179 GT:AD:DP:GQ:PL 0/1:15,14:29:99:430,0,422 chr1 109711956 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.10;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 109712056 . G T 681.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.22;QD=31.44;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:51:710,51,0 chr1 109712545 . G C 892.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.093;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=2.248;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.13;ReadPosRankSum=0.230;SOR=1.099 GT:AD:DP:GQ:PL 0/1:30,29:59:99:921,0,1238 chr1 109712552 . T G 923.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.460;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=5.067;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.21;ReadPosRankSum=-0.069;SOR=0.272 GT:AD:DP:GQ:PL 0/1:31,34:65:99:952,0,1162 chr1 109712974 . C G 388.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.421;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=3.419;MLEAC=1;MLEAF=0.500;MQ=58.49;MQRankSum=-2.746;QD=11.78;ReadPosRankSum=-0.630;SOR=1.483 GT:AD:DP:GQ:PL 0/1:19,14:33:99:417,0,579 chr1 109713598 . A C 6826.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.155;ClippingRankSum=0.000;DP=531;ExcessHet=3.0103;FS=1.090;MLEAC=1;MLEAF=0.500;MQ=59.84;MQRankSum=-2.343;QD=12.95;ReadPosRankSum=-0.635;SOR=0.751 GT:AD:DP:GQ:PL 0/1:275,252:527:99:6855,0,6952 chr1 109714002 . T G 526.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.751;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.81;ReadPosRankSum=-0.402;SOR=0.818 GT:AD:DP:GQ:PL 0/1:11,17:28:99:555,0,301 chr1 109714906 . A T 796.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.690;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=4.083;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.43;ReadPosRankSum=0.555;SOR=0.223 GT:AD:DP:GQ:PL 0/1:14,25:39:99:825,0,433 chr1 109715742 . A G 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.842;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr1 109737079 . C T 2212.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.61;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2241,210,0 chr1 109737199 . C A 3022.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.96;SOR=0.911 GT:AD:DP:GQ:PL 1/1:0,89:89:99:3051,267,0 chr1 109737292 . C T 3690.77 PASS AC=2;AF=1.00;AN=2;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.66;SOR=1.129 GT:AD:DP:GQ:PL 1/1:0,113:113:99:3719,339,0 chr1 109739319 . G A 2991.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.17;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,93:93:99:3020,279,0 chr1 109740350 . G T 11340.77 PASS AC=2;AF=1.00;AN=2;DP=353;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.13;SOR=1.497 GT:AD:DP:GQ:PL 1/1:0,353:353:99:11369,1054,0 chr1 109750234 . G C 1070.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.777;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.381;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.85;ReadPosRankSum=0.418;SOR=1.157 GT:AD:DP:GQ:PL 0/1:25,35:60:99:1099,0,694 chr1 109751367 . A G 2663.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.051;ClippingRankSum=0.000;DP=205;ExcessHet=3.0103;FS=1.112;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.06;ReadPosRankSum=0.542;SOR=0.591 GT:AD:DP:GQ:PL 0/1:99,105:204:99:2692,0,2690 chr1 109751955 . A G 1332.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.200;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=3.860;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.20;ReadPosRankSum=-0.403;SOR=0.395 GT:AD:DP:GQ:PL 0/1:47,54:101:99:1361,0,1239 chr1 109753021 . G T 1759.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.562;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=3.521;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.31;ReadPosRankSum=0.047;SOR=0.432 GT:AD:DP:GQ:PL 0/1:76,67:143:99:1788,0,2324 chr1 109753150 . T C 8638.77 PASS AC=2;AF=1.00;AN=2;DP=266;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,265:265:99:8667,795,0 chr1 109753268 . C G 4935.77 PASS AC=2;AF=1.00;AN=2;DP=148;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.35;SOR=1.917 GT:AD:DP:GQ:PL 1/1:0,148:148:99:4964,444,0 chr1 109753395 . C T 471.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.31;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:500,36,0 chr1 109757819 . G A 5847.77 PASS AC=2;AF=1.00;AN=2;DP=181;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.31;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,181:181:99:5876,543,0 chr1 109757882 . A G 5426.77 PASS AC=2;AF=1.00;AN=2;DP=160;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.92;SOR=1.207 GT:AD:DP:GQ:PL 1/1:0,160:160:99:5455,481,0 chr1 109761309 . G C 552.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.82;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:581,42,0 chr1 109791412 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 109880978 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 109881278 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 109885602 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 109889842 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 109889845 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 109889943 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 109898100 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 109899065 . A C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 109905968 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 109908258 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 109917151 . C T 963.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.166;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=2.433;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.90;ReadPosRankSum=0.434;SOR=1.666 GT:AD:DP:GQ:PL 0/1:22,29:51:99:992,0,732 chr1 109923716 . C A 19703.77 PASS AC=2;AF=1.00;AN=2;DP=596;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.06;SOR=1.024 GT:AD:DP:GQ:PL 1/1:0,596:596:99:19732,1784,0 chr1 109924087 . T C 10792.77 PASS AC=2;AF=1.00;AN=2;DP=337;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.03;SOR=1.206 GT:AD:DP:GQ:PL 1/1:0,337:337:99:10821,1011,0 chr1 109925123 . A G 3804.77 PASS AC=2;AF=1.00;AN=2;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.93;SOR=1.089 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3833,369,0 chr1 109925209 . T A 1449.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.555;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.58;ReadPosRankSum=-1.780;SOR=0.726 GT:AD:DP:GQ:PL 0/1:74,63:137:99:1478,0,1974 chr1 109927802 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 109930106 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 109933900 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 109933971 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 109961738 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.85;ReadPosRankSum=1.242;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:75:75,0,75 chr1 109984850 . G A 173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.48;ReadPosRankSum=-1.275;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:202,0,215 chr1 110038082 . A G 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.248;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.89;ReadPosRankSum=0.967;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:137,0,172 chr1 110038084 . A G 375.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.787;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.05;ReadPosRankSum=0.578;SOR=0.330 GT:AD:DP:GQ:PL 0/1:3,12:15:93:404,0,93 chr1 110039158 . T G 5311.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.581;ClippingRankSum=0.000;DP=407;ExcessHet=3.0103;FS=0.516;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.05;ReadPosRankSum=-0.667;SOR=0.663 GT:AD:DP:GQ:PL 0/1:202,205:407:99:5340,0,5122 chr1 110045302 . G A 518.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.218;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=2.418;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.89;ReadPosRankSum=1.659;SOR=1.609 GT:AD:DP:GQ:PL 0/1:13,16:29:99:547,0,387 chr1 110045334 . G A 265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.15;ReadPosRankSum=0.799;SOR=1.445 GT:AD:DP:GQ:PL 0/1:4,8:12:99:294,0,126 chr1 110064397 . A G 205.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.73;ReadPosRankSum=-0.674;SOR=1.402 GT:AD:DP:GQ:PL 0/1:1,7:8:18:234,0,18 chr1 110070303 . G A 202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.549;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.53;ReadPosRankSum=1.085;SOR=0.859 GT:AD:DP:GQ:PL 0/1:2,7:9:56:231,0,56 chr1 110071778 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 110098575 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 110167097 . T C 4020.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.612;ClippingRankSum=0.000;DP=213;ExcessHet=3.0103;FS=1.667;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.88;ReadPosRankSum=2.070;SOR=0.579 GT:AD:DP:GQ:PL 0/1:109,104:213:99:4049,0,5775 chr1 110167098 . G A 4020.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.293;ClippingRankSum=0.000;DP=212;ExcessHet=3.0103;FS=1.064;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.97;ReadPosRankSum=1.751;SOR=0.590 GT:AD:DP:GQ:PL 0/1:107,105:212:99:4049,0,5775 chr1 110171814 . A T 318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.565;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=4.481;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.94;ReadPosRankSum=0.089;SOR=1.535 GT:AD:DP:GQ:PL 0/1:7,13:20:99:347,0,232 chr1 110173889 . C T 1380.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.96;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1409,114,0 chr1 110176467 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=39.55;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 110192415 . T G 1036.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.924;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=0.961;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.82;ReadPosRankSum=-0.097;SOR=0.498 GT:AD:DP:GQ:PL 0/1:42,33:75:99:1065,0,1142 chr1 110195674 . G A 4336.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.462;ClippingRankSum=0.000;DP=277;ExcessHet=3.0103;FS=0.447;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.66;ReadPosRankSum=0.847;SOR=0.743 GT:AD:DP:GQ:PL 0/1:114,163:277:99:4365,0,2756 chr1 110197242 . A G 185.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.48;ReadPosRankSum=-0.349;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:214,0,202 chr1 110197651 . G T 1516.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.444;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=3.812;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.02;ReadPosRankSum=0.722;SOR=1.092 GT:AD:DP:GQ:PL 0/1:45,56:101:99:1545,0,1303 chr1 110197784 . C T 237.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.210;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.81;ReadPosRankSum=-0.331;SOR=0.495 GT:AD:DP:GQ:PL 0/1:17,10:27:99:266,0,527 chr1 110197850 . A G 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=-0.751;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,212 chr1 110198066 . C T 1217.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.746;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=0.882;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=-1.354;SOR=0.580 GT:AD:DP:GQ:PL 0/1:55,46:101:99:1246,0,1621 chr1 110222770 . A G 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-0.967;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,176 chr1 110222913 . C G 4496.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.81;SOR=4.958 GT:AD:DP:GQ:PL 1/1:0,114:114:99:4525,343,0 chr1 110226583 . G C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.11;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 110243697 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 110243714 . C T 73.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:101,12,0 chr1 110244954 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 110246485 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 110264810 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 110339822 . A G 5808.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.514;ClippingRankSum=0.000;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=35.28;ReadPosRankSum=1.516;SOR=0.888 GT:AD:DP:GQ:PL 1/1:1,154:155:99:5837,424,0 chr1 110341295 . A G 6448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.571;ClippingRankSum=0.000;DP=490;ExcessHet=3.0103;FS=1.100;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.16;ReadPosRankSum=0.960;SOR=0.588 GT:AD:DP:GQ:PL 0/1:249,241:490:99:6477,0,6679 chr1 110364158 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 110377281 . T C 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.75;ReadPosRankSum=-0.431;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:98:224,0,98 chr1 110378632 . G C 199.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.728;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.98;ReadPosRankSum=1.001;SOR=0.569 GT:AD:DP:GQ:PL 0/1:3,7:10:95:228,0,95 chr1 110378729 . A G 575.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.559;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=7.354;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=-0.149;SOR=2.517 GT:AD:DP:GQ:PL 0/1:20,18:38:99:604,0,551 chr1 110389161 . C T 214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.976;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.30;ReadPosRankSum=0.138;SOR=0.425 GT:AD:DP:GQ:PL 0/1:11,8:19:99:243,0,390 chr1 110403672 . G A 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=0.967;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:137,0,221 chr1 110407098 . C T 2764.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.72;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2793,270,0 chr1 110407188 . A C 528.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.048;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=4.586;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.99;ReadPosRankSum=0.634;SOR=2.833 GT:AD:DP:GQ:PL 0/1:8,15:23:99:557,0,231 chr1 110407235 . A T 514.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.62;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr1 110407655 . G A 3855.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.002;ClippingRankSum=0.000;DP=314;ExcessHet=3.0103;FS=0.943;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=-0.675;SOR=0.784 GT:AD:DP:GQ:PL 0/1:173,140:313:99:3884,0,4877 chr1 110407817 . C T 5861.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.865;ClippingRankSum=0.000;DP=447;ExcessHet=3.0103;FS=1.131;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.17;ReadPosRankSum=0.797;SOR=0.591 GT:AD:DP:GQ:PL 0/1:205,240:445:99:5890,0,5487 chr1 110439436 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 110450939 . C G 355.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.68;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:384,30,0 chr1 110451117 . C A 2564.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.040;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=1.717;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.13;ReadPosRankSum=0.129;SOR=0.898 GT:AD:DP:GQ:PL 0/1:79,80:159:99:2593,0,2469 chr1 110451368 . G A 3942.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.263;ClippingRankSum=0.000;DP=325;ExcessHet=3.0103;FS=0.895;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.13;ReadPosRankSum=0.611;SOR=0.614 GT:AD:DP:GQ:PL 0/1:167,158:325:99:3971,0,4468 chr1 110456144 . T A 573.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.332;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=5.828;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.39;ReadPosRankSum=-0.670;SOR=0.098 GT:AD:DP:GQ:PL 0/1:13,20:33:99:602,0,444 chr1 110456232 . G A 1401.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.917;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.795;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.30;ReadPosRankSum=0.052;SOR=0.868 GT:AD:DP:GQ:PL 0/1:45,53:98:99:1430,0,1244 chr1 110473767 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 110475976 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 110477152 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 110479106 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 110483234 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 110489419 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 110559877 . C G 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.92;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:70:70,0,75 chr1 110559880 . C T 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.92;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:70:70,0,75 chr1 110571532 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 110571677 . G A 129.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.98;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:158,15,0 chr1 110601904 . T G 689.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.40;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,18:18:54:718,54,0 chr1 110602039 . A G 1958.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.892;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=3.994;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.09;ReadPosRankSum=0.995;SOR=0.431 GT:AD:DP:GQ:PL 0/1:85,77:162:99:1987,0,2406 chr1 110607285 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 110607573 . A G 59.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.29;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:87,6,0 chr1 110607591 . A G 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 110607794 . T G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 110613165 . C T 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr1 110618630 . G A 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr1 110630872 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 110630876 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 110658510 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 110658528 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 110658538 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 110658539 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 110658544 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 110658551 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 110672850 . A C 309.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.934;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.65;ReadPosRankSum=1.732;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,10:15:99:338,0,164 chr1 110735828 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 110780620 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 110848759 . A G 252.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.084;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.963;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.05;ReadPosRankSum=-0.348;SOR=0.148 GT:AD:DP:GQ:PL 0/1:3,11:14:83:281,0,83 chr1 110854554 . T G 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.221;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=0.000;SOR=0.160 GT:AD:DP:GQ:PL 0/1:5,5:10:99:145,0,179 chr1 110854694 . A G 210.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.708;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=1.520;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.53;ReadPosRankSum=0.650;SOR=1.123 GT:AD:DP:GQ:PL 0/1:17,11:28:99:239,0,456 chr1 110891729 . G A 210.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.35;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:239,18,0 chr1 110892089 . C T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 110892713 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 110894235 . T G 11216.77 PASS AC=2;AF=1.00;AN=2;DP=251;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.25;SOR=1.116 GT:AD:DP:GQ:PL 1/1:0,251:251:99:11245,758,0 chr1 110894236 . C T 11216.77 PASS AC=2;AF=1.00;AN=2;DP=250;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.86;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,250:250:99:11245,758,0 chr1 110894507 . A C 2089.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.17;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2118,189,0 chr1 110894799 . C A 1928.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.15;SOR=1.688 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1957,180,0 chr1 110896905 . A G 396.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.10;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:425,33,0 chr1 110898863 . A G 173.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:202,15,0 chr1 110899207 . C T 5290.77 PASS AC=2;AF=1.00;AN=2;DP=165;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.07;SOR=1.138 GT:AD:DP:GQ:PL 1/1:0,165:165:99:5319,494,0 chr1 110950185 . G A 321.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.564;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=2.187;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.87;ReadPosRankSum=-1.133;SOR=1.473 GT:AD:DP:GQ:PL 0/1:14,11:25:99:350,0,395 chr1 110950237 . T C 293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.464;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=1.122;SOR=1.329 GT:AD:DP:GQ:PL 0/1:5,9:14:99:322,0,167 chr1 110951572 . C T 1350.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.145;ClippingRankSum=0.000;DP=130;ExcessHet=3.0103;FS=0.677;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.39;ReadPosRankSum=0.343;SOR=0.787 GT:AD:DP:GQ:PL 0/1:81,49:130:99:1379,0,2396 chr1 111007752 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 111007814 . C T 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 111041027 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 111041033 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 111041051 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 111118791 . T C 739.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.989;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.70;ReadPosRankSum=1.334;SOR=0.693 GT:AD:DP:GQ:PL 0/1:26,28:54:99:768,0,639 chr1 111120418 . A G 163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.20;ReadPosRankSum=2.100;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,6:9:80:192,0,80 chr1 111183404 . G A 938.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.77;SOR=3.180 GT:AD:DP:GQ:PL 1/1:0,27:27:81:967,81,0 chr1 111183591 . A G 746.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.64;SOR=3.160 GT:AD:DP:GQ:PL 1/1:0,21:21:63:775,63,0 chr1 111183666 . T G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 111188279 . C T 1820.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.889;ClippingRankSum=0.000;DP=154;ExcessHet=3.0103;FS=5.195;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.82;ReadPosRankSum=-1.048;SOR=0.380 GT:AD:DP:GQ:PL 0/1:75,79:154:99:1849,0,2276 chr1 111194561 . C T 3652.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.91;SOR=1.407 GT:AD:DP:GQ:PL 1/1:0,111:111:99:3681,333,0 chr1 111197460 . T G 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.431;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 111197723 . C G 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.56;ReadPosRankSum=-0.623;SOR=0.269 GT:AD:DP:GQ:PL 0/1:8,4:12:99:131,0,294 chr1 111200092 . A C 232.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.879;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=5.738;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.03;ReadPosRankSum=-0.700;SOR=0.095 GT:AD:DP:GQ:PL 0/1:19,10:29:99:261,0,700 chr1 111200139 . T C 445.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.283;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=7.307;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.96;ReadPosRankSum=0.383;SOR=1.965 GT:AD:DP:GQ:PL 0/1:39,17:56:99:474,0,1070 chr1 111200216 . G C 2046.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.957;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=3.823;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.24;ReadPosRankSum=-0.797;SOR=1.142 GT:AD:DP:GQ:PL 0/1:71,55:126:99:2075,0,2905 chr1 111200219 . A G 2046.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.608;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=3.812;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.37;ReadPosRankSum=-0.506;SOR=1.111 GT:AD:DP:GQ:PL 0/1:71,54:125:99:2075,0,2905 chr1 111203832 . T G 95.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.18;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:124,15,0 chr1 111227801 . T G 5927.77 PASS AC=2;AF=1.00;AN=2;DP=176;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.68;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,176:176:99:5956,528,0 chr1 111227969 . A G 1428.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.958;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.42;ReadPosRankSum=-1.556;SOR=0.602 GT:AD:DP:GQ:PL 0/1:33,49:82:99:1457,0,962 chr1 111230946 . G C 1105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.042;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.803;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=1.281;SOR=0.590 GT:AD:DP:GQ:PL 0/1:40,49:89:99:1134,0,1017 chr1 111231208 . A T 611.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.518;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.71;ReadPosRankSum=1.514;SOR=0.689 GT:AD:DP:GQ:PL 0/1:35,28:63:99:640,0,954 chr1 111235619 . C T 5081.77 PASS AC=2;AF=1.00;AN=2;DP=160;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,160:160:99:5110,477,0 chr1 111236202 . T C 1226.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.292;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.31;ReadPosRankSum=-0.393;SOR=0.802 GT:AD:DP:GQ:PL 0/1:27,40:67:99:1255,0,760 chr1 111241360 . C T 2452.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.339;ClippingRankSum=0.000;DP=192;ExcessHet=3.0103;FS=0.557;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=1.390;SOR=0.648 GT:AD:DP:GQ:PL 0/1:97,94:191:99:2481,0,2549 chr1 111242161 . G C 1380.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.089;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=1.563;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.67;ReadPosRankSum=0.595;SOR=0.881 GT:AD:DP:GQ:PL 0/1:59,50:109:99:1409,0,1611 chr1 111242194 . G A 1682.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.032;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=3.130;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=3.007;SOR=0.585 GT:AD:DP:GQ:PL 0/1:67,64:131:99:1711,0,1702 chr1 111242473 . C G 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-0.842;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 111242928 . C T 251.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.92;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:280,21,0 chr1 111243308 . T C 816.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.812;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=4.051;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.59;ReadPosRankSum=-0.563;SOR=0.303 GT:AD:DP:GQ:PL 0/1:24,32:56:99:845,0,698 chr1 111282604 . C T 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=-0.303;SOR=0.180 GT:AD:DP:GQ:PL 0/1:2,5:7:63:120,0,63 chr1 111283132 . C T 507.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.734;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.16;ReadPosRankSum=1.930;SOR=0.551 GT:AD:DP:GQ:PL 0/1:7,17:24:99:536,0,220 chr1 111283261 . T C 1393.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.697;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.37;ReadPosRankSum=-1.712;SOR=0.697 GT:AD:DP:GQ:PL 0/1:47,50:97:99:1422,0,1263 chr1 111283987 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 111285127 . G T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 111290578 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 111290632 . G C 286.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.728;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.12;ReadPosRankSum=0.244;SOR=0.818 GT:AD:DP:GQ:PL 0/1:7,8:15:99:315,0,270 chr1 111290648 . C T 286.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.12;ReadPosRankSum=-0.253;SOR=0.818 GT:AD:DP:GQ:PL 0/1:7,8:15:99:315,0,270 chr1 111290819 . G A 1091.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.099;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.02;ReadPosRankSum=-0.704;SOR=0.640 GT:AD:DP:GQ:PL 0/1:67,42:109:99:1120,0,1744 chr1 111290895 . G A 838.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.556;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.49;ReadPosRankSum=-0.228;SOR=0.578 GT:AD:DP:GQ:PL 0/1:41,32:73:99:867,0,1221 chr1 111291039 . T C 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.03;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 111308549 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 111311383 . C G 581.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.22;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:610,51,0 chr1 111311474 . A G 1182.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.13;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1211,114,0 chr1 111311585 . T C 2194.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.28;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2223,204,0 chr1 111311601 . C T 2090.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.75;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2119,204,0 chr1 111312133 . A C 1033.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.03;SOR=3.098 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1062,78,0 chr1 111477602 . C A 713.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.57;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:17:51:742,51,0 chr1 111483530 . C T 698.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.467;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=1.298;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.26;ReadPosRankSum=-0.281;SOR=0.979 GT:AD:DP:GQ:PL 0/1:24,25:49:99:727,0,719 chr1 111483576 . T A 1216.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.742;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=3.742;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.14;ReadPosRankSum=-1.003;SOR=1.314 GT:AD:DP:GQ:PL 0/1:29,42:71:99:1245,0,745 chr1 111484054 . C T 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.473;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=-0.903;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,227 chr1 111485955 . A T 515.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.602;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=3.301;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.148;SOR=1.319 GT:AD:DP:GQ:PL 0/1:35,19:54:99:544,0,1018 chr1 111486571 . A G 3624.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.98;SOR=0.856 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3653,347,0 chr1 111486703 . A G 5896.77 PASS AC=2;AF=1.00;AN=2;DP=184;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.22;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,183:183:99:5925,549,0 chr1 111488656 . G T 2292.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.331;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=1.466;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.24;ReadPosRankSum=0.969;SOR=0.888 GT:AD:DP:GQ:PL 0/1:81,80:161:99:2321,0,2396 chr1 111489504 . T C 1975.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.588;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.82;ReadPosRankSum=1.700;SOR=0.773 GT:AD:DP:GQ:PL 0/1:54,51:105:99:2004,0,2672 chr1 111489509 . T G 2032.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.702;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=0.743;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.48;ReadPosRankSum=0.919;SOR=0.798 GT:AD:DP:GQ:PL 0/1:56,54:110:99:2061,0,2688 chr1 111489583 . C T 1468.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.910;ClippingRankSum=0.000;DP=143;ExcessHet=3.0103;FS=2.166;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.27;ReadPosRankSum=-0.658;SOR=0.630 GT:AD:DP:GQ:PL 0/1:87,56:143:99:1497,0,2443 chr1 111489725 . G A 1751.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.488;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=2.760;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.07;ReadPosRankSum=1.711;SOR=1.045 GT:AD:DP:GQ:PL 0/1:47,62:109:99:1780,0,1154 chr1 111490893 . T C 910.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.993;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=2.889;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.18;ReadPosRankSum=-0.544;SOR=0.302 GT:AD:DP:GQ:PL 0/1:28,25:53:99:939,0,1744 chr1 111490897 . A G 858.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.494;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=3.164;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.53;ReadPosRankSum=-0.181;SOR=0.272 GT:AD:DP:GQ:PL 0/1:26,23:49:99:887,0,1677 chr1 111491049 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 111499573 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 111499614 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 111499761 . G A 1656.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.68;SOR=5.376 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1685,134,0 chr1 111500010 . A G 6888.77 PASS AC=2;AF=1.00;AN=2;DP=203;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.93;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,203:203:99:6917,609,0 chr1 111500165 . T G 2233.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.689;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=0.614;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.30;ReadPosRankSum=-0.748;SOR=0.765 GT:AD:DP:GQ:PL 0/1:67,79:146:99:2262,0,1788 chr1 111500706 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 111502841 . T A 941.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.15;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,24:24:72:970,72,0 chr1 111503575 . C G 713.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.429;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=2.754;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.57;ReadPosRankSum=-0.133;SOR=0.337 GT:AD:DP:GQ:PL 0/1:22,27:49:99:742,0,601 chr1 111505948 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 111563625 . G T 272.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.80;ReadPosRankSum=1.030;SOR=1.802 GT:AD:DP:GQ:PL 0/1:3,8:11:92:301,0,92 chr1 111563720 . C T 669.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.413;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=3.934;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.98;ReadPosRankSum=0.988;SOR=1.292 GT:AD:DP:GQ:PL 0/1:35,26:61:99:698,0,970 chr1 111563822 . G A 3147.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.98;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3176,312,0 chr1 111607759 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr1 111607766 . T A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr1 111648510 . C T 35.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.96;ReadPosRankSum=-1.282;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,2:6:64:64,0,115 chr1 111648569 . T A 104.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.732;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.48;ReadPosRankSum=0.000;SOR=0.160 GT:AD:DP:GQ:PL 0/1:5,5:10:99:133,0,173 chr1 111649422 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 111670351 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 111687861 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 111691446 . T A 1828.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.223;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=1.546;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.18;ReadPosRankSum=-1.612;SOR=0.540 GT:AD:DP:GQ:PL 0/1:43,70:113:99:1857,0,1099 chr1 111695293 . A T 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-1.415;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr1 111697229 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-1.036;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 111709280 . C T 609.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.330;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.13;ReadPosRankSum=-1.264;SOR=0.624 GT:AD:DP:GQ:PL 0/1:47,28:75:99:638,0,1249 chr1 111709361 . C G 725.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.078;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=1.313;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.78;ReadPosRankSum=-1.232;SOR=0.446 GT:AD:DP:GQ:PL 0/1:17,29:46:99:754,0,436 chr1 111727250 . G A 2137.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.419;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=5.459;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.62;ReadPosRankSum=-0.863;SOR=1.076 GT:AD:DP:GQ:PL 0/1:110,74:184:99:2166,0,3135 chr1 111755756 . T C 1623.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.243;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.61;ReadPosRankSum=0.347;SOR=0.681 GT:AD:DP:GQ:PL 0/1:43,61:104:99:1652,0,1042 chr1 111756207 . T C 277.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.788;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.197;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.34;ReadPosRankSum=-0.400;SOR=0.283 GT:AD:DP:GQ:PL 0/1:7,10:17:99:306,0,230 chr1 111759586 . G T 1577.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.434;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=2.140;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.45;ReadPosRankSum=-1.268;SOR=0.904 GT:AD:DP:GQ:PL 0/1:87,64:151:99:1606,0,2294 chr1 111759597 . G A 1440.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.462;ClippingRankSum=0.000;DP=143;ExcessHet=3.0103;FS=4.364;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.08;ReadPosRankSum=1.106;SOR=1.096 GT:AD:DP:GQ:PL 0/1:86,57:143:99:1469,0,2249 chr1 111766331 . T C 1822.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.239;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=2.817;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.54;ReadPosRankSum=-0.226;SOR=0.544 GT:AD:DP:GQ:PL 0/1:87,71:158:99:1851,0,2346 chr1 111766350 . G A 1924.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.510;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.11;ReadPosRankSum=-1.161;SOR=0.678 GT:AD:DP:GQ:PL 0/1:83,76:159:99:1953,0,2237 chr1 111778125 . C T 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=0.000;SOR=0.707 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr1 111778178 . C T 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=1.282;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr1 111778700 . T C 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 111795830 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 111881382 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 111881455 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 111894722 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 111895041 . T C 107.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:135,12,0 chr1 111920995 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 111948910 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 111950230 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 111994954 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 111996439 . A G 1144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.689;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=0.664;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.94;ReadPosRankSum=0.544;SOR=0.593 GT:AD:DP:GQ:PL 0/1:74,54:128:99:1173,0,1811 chr1 112036078 . C A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 112238763 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 112243320 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 112282529 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 112384134 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 112385290 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 112449076 . T C 1456.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.033;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=0.643;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.63;ReadPosRankSum=0.370;SOR=0.794 GT:AD:DP:GQ:PL 0/1:78,59:137:99:1485,0,2046 chr1 112455872 . G A 724.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.597;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.71;ReadPosRankSum=1.366;SOR=0.569 GT:AD:DP:GQ:PL 0/1:12,23:35:99:753,0,362 chr1 112456605 . G A 2346.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.289;ClippingRankSum=0.000;DP=201;ExcessHet=3.0103;FS=1.733;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.73;ReadPosRankSum=-0.877;SOR=0.635 GT:AD:DP:GQ:PL 0/1:106,94:200:99:2375,0,3056 chr1 112467556 . G A 921.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.042;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=2.631;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.07;ReadPosRankSum=-0.852;SOR=1.151 GT:AD:DP:GQ:PL 0/1:23,31:54:99:950,0,662 chr1 112486310 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 112490639 . A G 152.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:181,15,0 chr1 112502266 . C T 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=1.036;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr1 112509533 . C G 372.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.609;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=1.527;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.81;ReadPosRankSum=0.711;SOR=1.140 GT:AD:DP:GQ:PL 0/1:13,14:27:99:401,0,394 chr1 112509564 . G C 320.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.399;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=1.515;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.46;ReadPosRankSum=-0.549;SOR=1.085 GT:AD:DP:GQ:PL 0/1:15,13:28:99:349,0,406 chr1 112511232 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 112514690 . A G 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-1.465;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 112516598 . T A 703.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.213;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.02;ReadPosRankSum=0.265;SOR=0.323 GT:AD:DP:GQ:PL 0/1:16,21:37:99:732,0,554 chr1 112520503 . A G 1892.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.991;ClippingRankSum=0.000;DP=173;ExcessHet=3.0103;FS=6.067;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.908;SOR=0.367 GT:AD:DP:GQ:PL 0/1:94,79:173:99:1921,0,2638 chr1 112540817 . C T 498.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.850;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=6.333;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.91;ReadPosRankSum=-0.977;SOR=1.778 GT:AD:DP:GQ:PL 0/1:36,20:56:99:527,0,844 chr1 112555912 . C T 901.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.624;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.917;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.66;ReadPosRankSum=-0.151;SOR=0.576 GT:AD:DP:GQ:PL 0/1:30,36:66:99:930,0,780 chr1 112570936 . G A 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=-0.703;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr1 112571489 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 112585664 . C T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 112601390 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 112617968 . C G 611.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.981;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=2.327;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.37;ReadPosRankSum=-0.376;SOR=1.056 GT:AD:DP:GQ:PL 0/1:35,24:59:99:640,0,944 chr1 112619790 . C G 1462.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.377;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=0.762;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.48;ReadPosRankSum=0.533;SOR=0.803 GT:AD:DP:GQ:PL 0/1:45,56:101:99:1491,0,1159 chr1 112653575 . A T 154.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.973;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=2.483;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.42;ReadPosRankSum=0.367;SOR=0.197 GT:AD:DP:GQ:PL 0/1:20,15:35:99:183,0,589 chr1 112654581 . A G 692.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.428;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=1.990;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.04;ReadPosRankSum=0.403;SOR=0.693 GT:AD:DP:GQ:PL 0/1:37,32:69:99:721,0,890 chr1 112659586 . C T 98.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.11;ReadPosRankSum=-0.484;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:87:127,0,87 chr1 112659795 . G A 1076.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.285;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.36;ReadPosRankSum=-0.211;SOR=0.653 GT:AD:DP:GQ:PL 0/1:39,36:75:99:1105,0,1016 chr1 112691834 . G A 2461.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.681;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=10.299;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.75;ReadPosRankSum=1.372;SOR=0.299 GT:AD:DP:GQ:PL 0/1:85,94:179:99:2490,0,2489 chr1 112695579 . T C 3085.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.133;ClippingRankSum=0.000;DP=200;ExcessHet=3.0103;FS=1.755;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.51;ReadPosRankSum=-1.679;SOR=0.573 GT:AD:DP:GQ:PL 0/1:88,111:199:99:3114,0,2222 chr1 112696856 . T C 3826.77 PASS AC=2;AF=1.00;AN=2;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.87;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,113:113:99:3855,339,0 chr1 112699866 . C T 5258.77 PASS AC=2;AF=1.00;AN=2;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.66;SOR=1.116 GT:AD:DP:GQ:PL 1/1:0,161:161:99:5287,483,0 chr1 112701811 . T C 4695.77 PASS AC=2;AF=1.00;AN=2;DP=139;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=2.252 GT:AD:DP:GQ:PL 1/1:0,139:139:99:4724,417,0 chr1 112703607 . T A 1158.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.841;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=-2.446;SOR=0.545 GT:AD:DP:GQ:PL 0/1:57,43:100:99:1187,0,1578 chr1 112704008 . G A 111.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.36;ReadPosRankSum=-0.524;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:140,0,27 chr1 112705743 . A G 3143.77 PASS AC=2;AF=1.00;AN=2;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=2.807 GT:AD:DP:GQ:PL 1/1:0,87:87:99:3172,261,0 chr1 112709992 . C A 3401.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=2.477;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=10.048;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.50;ReadPosRankSum=1.798;SOR=4.446 GT:AD:DP:GQ:PL 1/1:1,90:91:99:3430,263,0 chr1 112711645 . G C 1548.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.42;SOR=1.714 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1577,135,0 chr1 112711862 . A G 2212.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.52;SOR=2.948 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2241,183,0 chr1 112712767 . C T 1811.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.84;SOR=2.215 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1840,155,0 chr1 112713760 . A C 1885.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.90;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1914,138,0 chr1 112744158 . T C 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr1 112748300 . C G 216.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.58;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:245,18,0 chr1 112748471 . G T 249.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.487;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.14;ReadPosRankSum=-0.359;SOR=0.765 GT:AD:DP:GQ:PL 0/1:21,14:35:99:278,0,500 chr1 112758454 . A T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.62;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 112758456 . A T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.84;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 112759035 . G A 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr1 112802968 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 112804870 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 112819443 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 112881479 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 112886550 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 112913924 . A T 1333.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.99;SOR=1.464 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1362,135,0 chr1 112918065 . T G 1541.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.20;SOR=5.838 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1570,112,0 chr1 112932530 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 113008934 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 113050762 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 113072974 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 113072984 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 113094302 . T C 947.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.38;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,25:25:75:976,75,0 chr1 113098481 . G C 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.50;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 113098992 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 113114470 . A C 9480.77 PASS AC=2;AF=1.00;AN=2;DP=302;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.50;SOR=1.163 GT:AD:DP:GQ:PL 1/1:0,301:301:99:9509,901,0 chr1 113116265 . G A 2269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.970;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=0.607;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.01;ReadPosRankSum=0.615;SOR=0.607 GT:AD:DP:GQ:PL 0/1:82,80:162:99:2298,0,2462 chr1 113123729 . G T 205.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.71;ReadPosRankSum=-0.884;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:234,0,219 chr1 113123731 . G T 205.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.15;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:234,0,219 chr1 113169334 . A G 121.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.803;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.18;ReadPosRankSum=0.967;SOR=0.307 GT:AD:DP:GQ:PL 0/1:6,4:10:99:150,0,302 chr1 113169351 . G C 121.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.589;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.53;ReadPosRankSum=1.559;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,4:9:99:150,0,285 chr1 113207262 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 113207304 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 113285471 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 113290758 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 113290854 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 113294225 . C T 31.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0 chr1 113348416 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 113424200 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 113450553 . C T 312.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.79;QD=34.75;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:341,27,0 chr1 113594301 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 113618494 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 113619569 . G T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.35;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 113619572 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.48;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 113619997 . C G 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr1 113623135 . A C 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.01;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 113630788 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 113646445 . G T 375.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.482;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=1.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.44;ReadPosRankSum=-0.573;SOR=0.324 GT:AD:DP:GQ:PL 0/1:22,14:36:99:404,0,776 chr1 113649372 . G A 4087.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.449;ClippingRankSum=0.000;DP=317;ExcessHet=3.0103;FS=2.478;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.94;ReadPosRankSum=-1.960;SOR=0.843 GT:AD:DP:GQ:PL 0/1:155,161:316:99:4116,0,3863 chr1 113654261 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 113692068 . C T 721.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.158;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=2.227;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.40;ReadPosRankSum=-0.688;SOR=1.380 GT:AD:DP:GQ:PL 0/1:21,23:44:99:750,0,677 chr1 113699256 . C T 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr1 113706760 . C T 1315.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.74;SOR=2.133 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1344,117,0 chr1 113713206 . T C 507.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.901;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.31;ReadPosRankSum=0.653;SOR=0.527 GT:AD:DP:GQ:PL 0/1:6,19:25:99:536,0,141 chr1 113713517 . C T 174.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=0.367;SOR=0.399 GT:AD:DP:GQ:PL 0/1:9,6:15:99:203,0,331 chr1 113722622 . C T 62.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:90,9,0 chr1 113724725 . C T 1820.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.35;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1849,159,0 chr1 113738095 . A C 253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.257;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.828;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.15;ReadPosRankSum=0.892;SOR=0.250 GT:AD:DP:GQ:PL 0/1:14,11:25:99:282,0,441 chr1 113745658 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 113766550 . C T 344.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.98;ReadPosRankSum=-0.550;SOR=1.473 GT:AD:DP:GQ:PL 0/1:5,10:15:99:373,0,164 chr1 113812032 . T C 1248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.059;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=1.867;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.81;ReadPosRankSum=0.780;SOR=0.458 GT:AD:DP:GQ:PL 0/1:37,42:79:99:1277,0,1018 chr1 113812320 . T G 985.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.039;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=2.854;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.49;ReadPosRankSum=-0.188;SOR=1.079 GT:AD:DP:GQ:PL 0/1:54,40:94:99:1014,0,1445 chr1 113815128 . G A 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.67;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 113826846 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.82;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 113826901 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.82;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 113829906 . T G 511.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.115;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=3.005;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.12;ReadPosRankSum=-1.204;SOR=0.316 GT:AD:DP:GQ:PL 0/1:20,19:39:99:540,0,582 chr1 113834471 . A G 2408.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.46;SOR=2.368 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2437,216,0 chr1 113834526 . T C 199.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.648;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.05;ReadPosRankSum=0.117;SOR=0.296 GT:AD:DP:GQ:PL 0/1:24,9:33:99:228,0,823 chr1 113834946 . A G 4359.77 PASS AC=2;AF=1.00;AN=2;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.80;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,129:129:99:4388,387,0 chr1 113835147 . G A 325.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.51;ReadPosRankSum=-0.424;SOR=0.610 GT:AD:DP:GQ:PL 0/1:11,10:21:99:354,0,396 chr1 113851841 . C T 391.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.344;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.51;ReadPosRankSum=-0.540;SOR=0.507 GT:AD:DP:GQ:PL 0/1:15,12:27:99:420,0,521 chr1 113854333 . G A 99.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.736;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.67;ReadPosRankSum=0.326;SOR=0.804 GT:AD:DP:GQ:PL 0/1:9,4:13:99:128,0,303 chr1 113855166 . C T 223.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=0.341;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,8:16:99:252,0,252 chr1 113856811 . C T 475.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.406;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.82;ReadPosRankSum=-0.282;SOR=0.941 GT:AD:DP:GQ:PL 0/1:8,16:24:99:504,0,228 chr1 113858182 . C T 155.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.97;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:184,18,0 chr1 113858282 . C G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=6.021;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.000;SOR=2.788 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 113858609 . A G 745.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.297;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=1.261;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.64;ReadPosRankSum=-0.569;SOR=1.075 GT:AD:DP:GQ:PL 0/1:30,29:59:99:774,0,851 chr1 113859282 . T G 444.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.788;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=2.231;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.11;ReadPosRankSum=-1.939;SOR=0.223 GT:AD:DP:GQ:PL 0/1:12,14:26:99:473,0,357 chr1 113871355 . G T 188.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.16;ReadPosRankSum=-0.289;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:217,0,176 chr1 113881031 . C T 573.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.751;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=0.084;SOR=1.251 GT:AD:DP:GQ:PL 0/1:22,19:41:99:602,0,681 chr1 113881979 . C T 3424.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.93;SOR=1.436 GT:AD:DP:GQ:PL 1/1:0,104:104:99:3453,312,0 chr1 113886718 . T C 1392.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.355;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.90;ReadPosRankSum=-0.188;SOR=0.713 GT:AD:DP:GQ:PL 0/1:59,49:108:99:1421,0,1655 chr1 113896329 . A G 1520.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.200;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.694;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=-3.341;SOR=0.773 GT:AD:DP:GQ:PL 0/1:58,56:114:99:1549,0,1603 chr1 113897636 . C G 361.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.446;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=3.188;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.47;ReadPosRankSum=0.063;SOR=0.169 GT:AD:DP:GQ:PL 0/1:13,12:25:99:390,0,468 chr1 114018811 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 114078103 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 114096092 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 114099063 . A G 3421.77 PASS AC=2;AF=1.00;AN=2;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.68;SOR=1.588 GT:AD:DP:GQ:PL 1/1:0,108:108:99:3450,324,0 chr1 114128303 . A T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 114137204 . C G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 114137688 . G A 5927.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.042;ClippingRankSum=0.000;DP=425;ExcessHet=3.0103;FS=2.447;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.95;ReadPosRankSum=-1.123;SOR=0.526 GT:AD:DP:GQ:PL 0/1:220,205:425:99:5956,0,6565 chr1 114139310 . T C 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.73;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 114139379 . A C 281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.999;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=1.596;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.44;ReadPosRankSum=-0.542;SOR=1.115 GT:AD:DP:GQ:PL 0/1:16,11:27:99:310,0,379 chr1 114161071 . A T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 114191013 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 114195779 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 114195783 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 114202456 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 114266701 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 114289324 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 114312806 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 114346210 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 114353453 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 114405659 . A G 7225.77 PASS AC=2;AF=1.00;AN=2;DP=224;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.26;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,224:224:99:7254,672,0 chr1 114408598 . C T 489.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.050;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.33;ReadPosRankSum=0.282;SOR=0.631 GT:AD:DP:GQ:PL 0/1:13,17:30:99:518,0,373 chr1 114420491 . A G 1133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.770;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=1.732;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.81;ReadPosRankSum=-0.009;SOR=0.511 GT:AD:DP:GQ:PL 0/1:47,49:96:99:1162,0,1322 chr1 114426978 . G T 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.94;ReadPosRankSum=0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:112,0,30 chr1 114426999 . A G 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.13;ReadPosRankSum=0.341;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:137,0,65 chr1 114430807 . T C 580.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.333;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.96;ReadPosRankSum=1.129;SOR=0.627 GT:AD:DP:GQ:PL 0/1:27,26:53:99:609,0,564 chr1 114433602 . A C 231.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.835;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.62;ReadPosRankSum=-2.065;SOR=0.521 GT:AD:DP:GQ:PL 0/1:21,14:35:99:260,0,636 chr1 114464147 . T C 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=0.967;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr1 114510877 . A G 415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.126;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=7.806;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=-0.776;SOR=0.342 GT:AD:DP:GQ:PL 0/1:15,17:32:99:444,0,372 chr1 114535926 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 114537896 . G A 378.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.14;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:39:407,39,0 chr1 114537976 . A G 174.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.998;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.56;ReadPosRankSum=1.169;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:203,0,180 chr1 114538254 . A G 621.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.54;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:54:650,54,0 chr1 114568062 . A C 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.95;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 114570265 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 114570321 . C T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 114585466 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 114585834 . A G 627.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.285;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=2.013;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.97;ReadPosRankSum=-0.145;SOR=0.228 GT:AD:DP:GQ:PL 0/1:15,22:37:99:656,0,475 chr1 114601683 . C T 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.736;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=3.358;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.29;ReadPosRankSum=1.304;SOR=2.093 GT:AD:DP:GQ:PL 0/1:6,7:13:99:253,0,199 chr1 114602082 . A G 2529.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.85;SOR=1.151 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2558,246,0 chr1 114609030 . C T 563.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.209;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=4.235;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.25;ReadPosRankSum=1.049;SOR=0.278 GT:AD:DP:GQ:PL 0/1:30,25:55:99:592,0,906 chr1 114618519 . C T 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.803;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.619;SOR=2.303 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,117 chr1 114622768 . A G 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.15;ReadPosRankSum=0.253;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:66:109,0,66 chr1 114622851 . T A 1725.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.16;SOR=7.523 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1754,126,0 chr1 114625819 . T G 1144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.408;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.919;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=-0.032;SOR=0.523 GT:AD:DP:GQ:PL 0/1:33,42:75:99:1173,0,970 chr1 114625979 . A T 953.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.301;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.897;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.72;ReadPosRankSum=-0.639;SOR=0.829 GT:AD:DP:GQ:PL 0/1:40,35:75:99:982,0,1135 chr1 114626201 . C T 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.94;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:112,0,30 chr1 114674265 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 114675106 . G C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.67;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 114679548 . G C 1089.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.246;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=5.359;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.97;ReadPosRankSum=-0.741;SOR=1.455 GT:AD:DP:GQ:PL 0/1:44,34:78:99:1118,0,1142 chr1 114679616 . T A 1518.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.292;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=0.617;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.70;ReadPosRankSum=1.008;SOR=0.762 GT:AD:DP:GQ:PL 0/1:76,66:142:99:1547,0,1976 chr1 114679813 . G A 698.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.47;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,19:19:57:727,57,0 chr1 114680692 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 114693284 . A G 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.792;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,101 chr1 114711407 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 114714048 . G A 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.519;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=2.632;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=-1.335;SOR=2.303 GT:AD:DP:GQ:PL 0/1:6,6:12:99:180,0,129 chr1 114717033 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 114717047 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.07;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 114717053 . G C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.01;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 114717063 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.67;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 114717067 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.15;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 114717078 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 114717082 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 114717105 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 114717122 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 114717129 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 114717144 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 114717146 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 114717147 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 114719503 . G A 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.15;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 114719969 . G A 113.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.22;ReadPosRankSum=-0.566;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:142,0,143 chr1 114723685 . C T 194.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.64;ReadPosRankSum=0.015;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:98:223,0,98 chr1 114737984 . A C 1339.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.446;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=0.606;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.43;ReadPosRankSum=0.071;SOR=0.760 GT:AD:DP:GQ:PL 0/1:101,58:159:99:1368,0,2645 chr1 114738161 . T C 393.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.967;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=11.190;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.58;ReadPosRankSum=0.056;SOR=0.026 GT:AD:DP:GQ:PL 0/1:19,15:34:99:422,0,691 chr1 114741435 . G T 1666.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.05;SOR=1.747 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1695,156,0 chr1 114759773 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 114799844 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 114855296 . A G 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.085;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=1.180;SOR=1.609 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,148 chr1 114857319 . T G 882.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.888;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=0.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.24;ReadPosRankSum=-1.101;SOR=0.527 GT:AD:DP:GQ:PL 0/1:26,36:62:99:911,0,662 chr1 114858515 . G A 1147.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.46;SOR=2.765 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1176,96,0 chr1 114860537 . T C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 114981595 . C T 174.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.949;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=0.044;SOR=2.066 GT:AD:DP:GQ:PL 0/1:9,6:15:99:203,0,297 chr1 114994746 . A C 198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.182;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.28;ReadPosRankSum=-0.431;SOR=0.446 GT:AD:DP:GQ:PL 0/1:16,8:24:99:227,0,460 chr1 115033402 . A G 3539.77 PASS AC=2;AF=1.00;AN=2;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.78;SOR=1.377 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3568,344,0 chr1 115033861 . C G 99.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=5.119;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.67;ReadPosRankSum=1.163;SOR=0.039 GT:AD:DP:GQ:PL 0/1:9,4:13:99:128,0,337 chr1 115034291 . T C 351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.339;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.07;ReadPosRankSum=0.694;SOR=1.371 GT:AD:DP:GQ:PL 0/1:14,11:25:99:380,0,475 chr1 115053631 . T C 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.19;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:69:69,0,72 chr1 115058994 . A G 2524.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.79;SOR=1.936 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2553,231,0 chr1 115061281 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 115072737 . T C 484.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.621;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=3.081;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.26;ReadPosRankSum=-0.244;SOR=2.093 GT:AD:DP:GQ:PL 0/1:19,15:34:99:513,0,591 chr1 115072855 . C G 1681.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.789;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=1.260;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.51;ReadPosRankSum=1.027;SOR=0.805 GT:AD:DP:GQ:PL 0/1:93,67:160:99:1710,0,2463 chr1 115076192 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 115089303 . C T 2108.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.01;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2137,185,0 chr1 115089915 . A C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 115115144 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 115116155 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 115286692 . G A 2307.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.814;ClippingRankSum=0.000;DP=176;ExcessHet=3.0103;FS=0.558;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=-1.022;SOR=0.616 GT:AD:DP:GQ:PL 0/1:90,86:176:99:2336,0,2362 chr1 115558537 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 115564360 . C G 80.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0 chr1 115598735 . A C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 115606736 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 115624615 . A C 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 115659527 . G A 163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.89;ReadPosRankSum=2.625;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:192,0,553 chr1 115682167 . T C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr1 115682171 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr1 115682304 . G A 453.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.614;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.73;ReadPosRankSum=-0.054;SOR=1.292 GT:AD:DP:GQ:PL 0/1:9,14:23:99:482,0,239 chr1 115682319 . C A 594.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.208;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=1.725;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.49;ReadPosRankSum=0.754;SOR=1.420 GT:AD:DP:GQ:PL 0/1:15,19:34:99:623,0,422 chr1 115682559 . A C 794.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.089;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.48;ReadPosRankSum=0.038;SOR=1.061 GT:AD:DP:GQ:PL 0/1:13,24:37:99:823,0,349 chr1 115683838 . C T 713.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.570;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=6.335;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.60;ReadPosRankSum=-0.491;SOR=3.014 GT:AD:DP:GQ:PL 0/1:22,21:43:99:742,0,687 chr1 115684241 . T C 158.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.68;ReadPosRankSum=1.068;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:187,0,62 chr1 115685599 . C T 955.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.937;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=7.594;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.77;ReadPosRankSum=2.107;SOR=0.139 GT:AD:DP:GQ:PL 0/1:22,35:57:99:984,0,646 chr1 115691462 . T A 79.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.502;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.70;ReadPosRankSum=-1.146;SOR=0.368 GT:AD:DP:GQ:PL 0/1:9,5:14:99:117,0,299 chr1 115701256 . G A 223.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.026;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.640;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.39;ReadPosRankSum=-0.056;SOR=0.375 GT:AD:DP:GQ:PL 0/1:24,11:35:99:252,0,749 chr1 115701545 . C T 287.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=0.433;SOR=0.527 GT:AD:DP:GQ:PL 0/1:11,9:20:99:316,0,397 chr1 115703034 . G C 845.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.466;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=2.688;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.54;ReadPosRankSum=-0.532;SOR=1.012 GT:AD:DP:GQ:PL 0/1:60,39:99:99:874,0,1666 chr1 115703188 . C T 68.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.677;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.64;ReadPosRankSum=-1.380;SOR=0.576 GT:AD:DP:GQ:PL 0/1:21,5:26:97:97,0,714 chr1 115717911 . A T 2612.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=3.460;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.72;ReadPosRankSum=-0.400;SOR=0.448 GT:AD:DP:GQ:PL 0/1:48,67:115:99:2641,0,2162 chr1 115717923 . C T 2664.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.969;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=2.469;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.97;ReadPosRankSum=-0.829;SOR=0.488 GT:AD:DP:GQ:PL 0/1:46,70:116:99:2693,0,2115 chr1 115717983 . G A 1282.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.160;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=2.567;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.59;ReadPosRankSum=1.246;SOR=1.159 GT:AD:DP:GQ:PL 0/1:29,40:69:99:1311,0,787 chr1 115725662 . C T 163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.046;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.44;ReadPosRankSum=-0.426;SOR=1.140 GT:AD:DP:GQ:PL 0/1:15,7:22:99:192,0,487 chr1 115740722 . A G 274.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.331;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.58;ReadPosRankSum=-0.849;SOR=0.614 GT:AD:DP:GQ:PL 0/1:44,16:60:99:303,0,1317 chr1 115740905 . G A 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.445;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.61;ReadPosRankSum=-0.181;SOR=0.892 GT:AD:DP:GQ:PL 0/1:16,5:21:99:146,0,525 chr1 115745061 . T C 323.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.115;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=2.935;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.04;ReadPosRankSum=-0.586;SOR=0.191 GT:AD:DP:GQ:PL 0/1:7,12:19:99:352,0,235 chr1 115756233 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 115757516 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 115768577 . T C 1315.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.74;SOR=2.613 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1344,117,0 chr1 115827087 . C A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 115833487 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 115833496 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 115839688 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 115839697 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 115857214 . C T 461.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.78;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:45:490,45,0 chr1 115857708 . C G 541.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.80;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:63:570,63,0 chr1 115878836 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 115890159 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 115890182 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 115992231 . C T 2476.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.428;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=6.987;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.38;ReadPosRankSum=-0.471;SOR=0.359 GT:AD:DP:GQ:PL 0/1:67,94:161:99:2505,0,1724 chr1 116026909 . G C 947.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.014;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.952;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.94;ReadPosRankSum=-1.193;SOR=0.516 GT:AD:DP:GQ:PL 0/1:31,37:68:99:976,0,785 chr1 116027764 . C T 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 116027788 . A G 83.28 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.31;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:9:111,9,0 chr1 116031685 . G A 239.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.999;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.10;ReadPosRankSum=1.490;SOR=0.804 GT:AD:DP:GQ:PL 0/1:8,9:17:99:268,0,269 chr1 116035360 . G A 1822.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.08;SOR=2.790 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1851,156,0 chr1 116053054 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.21;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 116062802 . C T 1258.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.312;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.54;ReadPosRankSum=-2.014;SOR=0.662 GT:AD:DP:GQ:PL 0/1:40,53:93:99:1287,0,1059 chr1 116064633 . G T 855.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.62;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,22:22:66:884,66,0 chr1 116112871 . A G 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.11;ReadPosRankSum=0.792;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:134,0,104 chr1 116121103 . C T 1320.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.348;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.644;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.93;ReadPosRankSum=-0.532;SOR=0.677 GT:AD:DP:GQ:PL 0/1:74,59:133:99:1349,0,1930 chr1 116123948 . T A 405.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.597;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=2.235;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.53;ReadPosRankSum=-1.545;SOR=0.172 GT:AD:DP:GQ:PL 0/1:15,15:30:99:434,0,502 chr1 116127256 . T C 209.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=-0.332;SOR=0.368 GT:AD:DP:GQ:PL 0/1:11,7:18:99:238,0,405 chr1 116128153 . A G 1806.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.001;ClippingRankSum=0.000;DP=167;ExcessHet=3.0103;FS=1.240;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.95;ReadPosRankSum=-0.112;SOR=0.592 GT:AD:DP:GQ:PL 0/1:89,76:165:99:1835,0,1717 chr1 116128440 . A G 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.91;ReadPosRankSum=-0.306;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,5:13:99:170,0,295 chr1 116133414 . A C 1306.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.097;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=2.441;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.74;ReadPosRankSum=0.457;SOR=1.084 GT:AD:DP:GQ:PL 0/1:41,42:83:99:1335,0,1144 chr1 116133522 . A G 186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.98;ReadPosRankSum=-0.723;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:215,0,176 chr1 116211036 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 116255840 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 116285404 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 116298175 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 116298334 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 116311263 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 116311355 . C G 57.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:85,9,0 chr1 116319503 . C A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 116319515 . C G 104.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:132,12,0 chr1 116389941 . T A 877.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.52;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,22:22:66:906,66,0 chr1 116406090 . G A 728.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.30;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,19:19:57:757,57,0 chr1 116499066 . G A 135.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:163,12,0 chr1 116515777 . T A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 116533665 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 116571486 . A G 94.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.80;ReadPosRankSum=1.383;SOR=0.368 GT:AD:DP:GQ:PL 0/1:1,5:6:24:123,0,24 chr1 116579243 . G A 519.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.99;ReadPosRankSum=-0.066;SOR=1.022 GT:AD:DP:GQ:PL 0/1:11,15:26:99:548,0,381 chr1 116579508 . T C 3177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.150;ClippingRankSum=0.000;DP=281;ExcessHet=3.0103;FS=3.990;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.39;ReadPosRankSum=-0.267;SOR=0.702 GT:AD:DP:GQ:PL 0/1:159,120:279:99:3206,0,4028 chr1 116579666 . G C 1250.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.035;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=3.701;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.91;ReadPosRankSum=-2.199;SOR=1.197 GT:AD:DP:GQ:PL 0/1:68,37:105:99:1288,0,3107 chr1 116599909 . G A 2696.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.91;SOR=2.864 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2725,222,0 chr1 116603502 . T C 1517.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.498;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=2.665;MLEAC=1;MLEAF=0.500;MQ=59.93;MQRankSum=0.000;QD=13.08;ReadPosRankSum=-0.612;SOR=0.463 GT:AD:DP:GQ:PL 0/1:55,61:116:99:1546,0,1493 chr1 116604219 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 116672106 . A T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 116692347 . T A 61.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:89,9,0 chr1 116693518 . G A 249.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.98;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:30:278,30,0 chr1 116693623 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 116736783 . C G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 116741973 . G A 148.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.304;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=2.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.44;ReadPosRankSum=-0.736;SOR=0.204 GT:AD:DP:GQ:PL 0/1:7,6:13:99:177,0,253 chr1 116897601 . C T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 116945088 . A G 12619.77 PASS AC=2;AF=1.00;AN=2;DP=283;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.39;SOR=1.240 GT:AD:DP:GQ:PL 1/1:0,283:283:99:12648,858,0 chr1 116945089 . T A 12619.77 PASS AC=2;AF=1.00;AN=2;DP=278;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.16;SOR=1.263 GT:AD:DP:GQ:PL 1/1:0,278:278:99:12648,858,0 chr1 116945262 . G A 1491.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.45;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1520,120,0 chr1 116948967 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 116984530 . A T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.21;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 116986836 . G A 3647.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.087;ClippingRankSum=0.000;DP=253;ExcessHet=3.0103;FS=2.904;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.42;ReadPosRankSum=0.061;SOR=0.521 GT:AD:DP:GQ:PL 0/1:115,138:253:99:3676,0,3213 chr1 116998488 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 116998505 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 117002080 . T C 44.41 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.10;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:8:72,0,8 chr1 117011799 . A G 2333.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.243;ClippingRankSum=0.000;DP=165;ExcessHet=3.0103;FS=6.734;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.14;ReadPosRankSum=0.363;SOR=0.457 GT:AD:DP:GQ:PL 0/1:81,84:165:99:2362,0,2284 chr1 117013276 . G A 1158.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.28;SOR=3.545 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1187,96,0 chr1 117017104 . A G 5126.77 PASS AC=2;AF=1.00;AN=2;DP=152;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.73;SOR=1.488 GT:AD:DP:GQ:PL 1/1:0,152:152:99:5155,456,0 chr1 117018196 . A G 1621.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.954;ClippingRankSum=0.000;DP=130;ExcessHet=3.0103;FS=3.587;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.48;ReadPosRankSum=0.468;SOR=0.419 GT:AD:DP:GQ:PL 0/1:71,59:130:99:1650,0,1941 chr1 117018307 . C A 2480.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.148;ClippingRankSum=0.000;DP=229;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=-2.035;SOR=0.674 GT:AD:DP:GQ:PL 0/1:132,96:228:99:2509,0,3543 chr1 117060338 . C A 5028.77 PASS AC=2;AF=1.00;AN=2;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.63;SOR=1.122 GT:AD:DP:GQ:PL 1/1:0,159:159:99:5057,475,0 chr1 117060566 . G T 2465.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.52;SOR=2.899 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2494,210,0 chr1 117074048 . A G 231.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.11;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:260,21,0 chr1 117075083 . A G 3433.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.54;SOR=0.953 GT:AD:DP:GQ:PL 1/1:0,93:93:99:3462,279,0 chr1 117075445 . C T 4100.77 PASS AC=2;AF=1.00;AN=2;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.34;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,123:123:99:4129,368,0 chr1 117076100 . T C 2697.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.72;SOR=2.484 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2726,240,0 chr1 117079664 . A G 4248.77 PASS AC=2;AF=1.00;AN=2;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.35;SOR=1.171 GT:AD:DP:GQ:PL 1/1:0,140:140:99:4277,420,0 chr1 117084323 . G C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 117088769 . T C 2531.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.21;SOR=2.432 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2560,222,0 chr1 117095648 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 117115668 . C T 2485.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.077;ClippingRankSum=0.000;DP=181;ExcessHet=3.0103;FS=0.546;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.73;ReadPosRankSum=1.854;SOR=0.754 GT:AD:DP:GQ:PL 0/1:89,92:181:99:2514,0,2389 chr1 117117986 . C T 1798.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.33;SOR=3.958 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1827,141,0 chr1 117121291 . C T 1519.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.69;SOR=2.531 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1548,126,0 chr1 117121424 . C T 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.27;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 117123791 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 117147650 . G A 2016.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.03;SOR=1.437 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2045,195,0 chr1 117172404 . C T 2014.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.475;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=3.810;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=-0.073;SOR=0.458 GT:AD:DP:GQ:PL 0/1:75,77:152:99:2043,0,2027 chr1 117173484 . T A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 117203325 . T C 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 117209380 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 117209483 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 117215750 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.79;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 117215777 . A G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.42;QD=28.95;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 117215778 . C T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.42;QD=27.83;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 117235353 . A G 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 117238851 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 117241105 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 117313279 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 117352191 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 117523219 . A G 2169.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.56;SOR=1.117 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2198,213,0 chr1 117523737 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 117537598 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 117537648 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 117562932 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 117573681 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 117580644 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 117580663 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 117581947 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 117581951 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 117591656 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 117641037 . A C 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.293;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.41;ReadPosRankSum=0.239;SOR=0.976 GT:AD:DP:GQ:PL 0/1:8,6:14:99:174,0,258 chr1 117687599 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 117758807 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 117778022 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.51;MQRankSum=-0.674;QD=13.13;ReadPosRankSum=-0.385;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 117778237 . T A 945.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=45.29;QD=32.61;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,29:29:87:974,87,0 chr1 117778497 . T C 303.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.790;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.69;MQRankSum=-1.054;QD=9.21;ReadPosRankSum=-0.325;SOR=0.646 GT:AD:DP:GQ:PL 0/1:20,13:33:99:332,0,532 chr1 117816272 . G A 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.842;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,112 chr1 117877830 . C G 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=0.366;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,181 chr1 117881647 . C T 407.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.236;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.74;ReadPosRankSum=-0.743;SOR=0.990 GT:AD:DP:GQ:PL 0/1:16,16:32:99:436,0,370 chr1 117959539 . C T 602.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.128;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.79;ReadPosRankSum=1.334;SOR=1.302 GT:AD:DP:GQ:PL 0/1:11,18:29:99:631,0,302 chr1 117983969 . G A 671.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.59;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,20:20:60:700,60,0 chr1 118007821 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.674;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 118023330 . G A 417.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.257;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.204;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.28;ReadPosRankSum=-0.804;SOR=0.484 GT:AD:DP:GQ:PL 0/1:27,18:45:99:446,0,720 chr1 118040785 . G A 885.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.371;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.67;ReadPosRankSum=1.074;SOR=0.653 GT:AD:DP:GQ:PL 0/1:47,36:83:99:914,0,1237 chr1 118074651 . C T 341.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.091;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.942;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.22;ReadPosRankSum=-0.498;SOR=0.542 GT:AD:DP:GQ:PL 0/1:59,22:81:99:370,0,1525 chr1 118086502 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.84;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 118086638 . C T 1143.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.773;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=6.614;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.62;ReadPosRankSum=2.272;SOR=1.519 GT:AD:DP:GQ:PL 0/1:43,41:84:99:1172,0,1176 chr1 118101807 . A G 642.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.123;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=2.159;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.89;ReadPosRankSum=-0.573;SOR=0.991 GT:AD:DP:GQ:PL 0/1:33,26:59:99:671,0,744 chr1 118225870 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 118240036 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 118252725 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 118289314 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 118289332 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 118312964 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 118313026 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 118558363 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 118615286 . C T 316.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.80;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:33:345,33,0 chr1 118909877 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 118913966 . C T 434.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.711;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=0.232;SOR=0.627 GT:AD:DP:GQ:PL 0/1:15,14:29:99:463,0,481 chr1 118923652 . A G 1020.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.03;SOR=1.536 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1049,90,0 chr1 118923751 . G T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.45;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 118923816 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 118924504 . C T 722.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.15;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:751,54,0 chr1 118944613 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr1 118944617 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr1 118987510 . A G 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=1.221;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,179 chr1 119033195 . C G 2860.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.044;ClippingRankSum=0.000;DP=231;ExcessHet=3.0103;FS=0.477;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-1.073;SOR=0.729 GT:AD:DP:GQ:PL 0/1:117,113:230:99:2889,0,3298 chr1 119042037 . A G 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-0.967;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr1 119066292 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 119066295 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 119085233 . C T 448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.428;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.480;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.82;ReadPosRankSum=0.000;SOR=0.365 GT:AD:DP:GQ:PL 0/1:17,18:35:99:477,0,456 chr1 119085331 . T C 337.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.409;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.78;ReadPosRankSum=-0.752;SOR=0.473 GT:AD:DP:GQ:PL 0/1:8,11:19:99:366,0,243 chr1 119298022 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 119380908 . A C 2702.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.96;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2731,246,0 chr1 119380968 . G A 958.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.368;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.971;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.72;ReadPosRankSum=-0.439;SOR=0.527 GT:AD:DP:GQ:PL 0/1:31,30:61:99:987,0,959 chr1 119381101 . T C 4008.77 PASS AC=2;AF=1.00;AN=2;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.59;SOR=1.004 GT:AD:DP:GQ:PL 1/1:0,123:123:99:4037,369,0 chr1 119382780 . C T 4191.77 PASS AC=2;AF=1.00;AN=2;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.41;SOR=2.574 GT:AD:DP:GQ:PL 1/1:0,119:119:99:4220,358,0 chr1 119382841 . G A 6657.77 PASS AC=2;AF=1.00;AN=2;DP=193;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.50;SOR=1.685 GT:AD:DP:GQ:PL 1/1:0,193:193:99:6686,579,0 chr1 119383313 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 119385057 . A G 4546.77 PASS AC=2;AF=1.00;AN=2;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.68;SOR=1.490 GT:AD:DP:GQ:PL 1/1:0,135:135:99:4575,405,0 chr1 119385346 . T G 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr1 119392884 . A T 1136.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.03;SOR=5.353 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1165,87,0 chr1 119393640 . G A 1843.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.25;SOR=1.649 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1872,176,0 chr1 119417658 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 119417673 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 119417674 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 119417681 . T A 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr1 119445448 . C T 3263.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.14;SOR=1.584 GT:AD:DP:GQ:PL 1/1:0,90:90:99:3292,271,0 chr1 119445781 . C T 1499.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=2.012 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1528,111,0 chr1 119447562 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 119447778 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 119507840 . A G 605.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.69;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:634,48,0 chr1 119514535 . C T 5410.77 PASS AC=2;AF=1.00;AN=2;DP=160;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.24;QD=33.82;SOR=1.944 GT:AD:DP:GQ:PL 1/1:0,160:160:99:5439,480,0 chr1 119514623 . C A 2007.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.51;QD=28.04;SOR=5.590 GT:AD:DP:GQ:PL 1/1:0,50:50:99:2036,150,0 chr1 119526876 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 119533052 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 119534298 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 119542884 . A G 279.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:27:308,27,0 chr1 119542948 . C A 469.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.36;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:48:498,48,0 chr1 119545431 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 119545694 . T C 779.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.88;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,27:27:81:808,81,0 chr1 119545733 . A G 891.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.77;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,31:31:93:920,93,0 chr1 119545777 . C T 868.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.03;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,28:28:84:897,84,0 chr1 119545807 . C T 756.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.90;SOR=1.708 GT:AD:DP:GQ:PL 1/1:0,23:23:69:785,69,0 chr1 119545934 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.24;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 119568062 . G A 1921.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.51;QD=27.42;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1950,138,0 chr1 119568085 . G T 1813.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.00;QD=28.06;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1842,123,0 chr1 119568107 . G C 1276.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.21;QD=26.68;SOR=2.546 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1305,87,0 chr1 119568124 . A G 1096.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.38;QD=25.25;SOR=2.124 GT:AD:DP:GQ:PL 1/1:0,24:24:75:1125,75,0 chr1 119568132 . T C 1006.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.17;QD=26.58;SOR=2.030 GT:AD:DP:GQ:PL 1/1:0,23:23:69:1035,69,0 chr1 119568145 . C T 826.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.67;QD=29.20;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,18:18:57:855,57,0 chr1 119568151 . A G 736.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.68;QD=27.52;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,16:16:51:765,51,0 chr1 119568156 . C T 601.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.57;QD=31.65;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,13:13:42:630,42,0 chr1 119568158 . G T 556.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.42;QD=28.55;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:39:585,39,0 chr1 119568160 . A G 466.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=45.98;QD=32.85;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:33:495,33,0 chr1 119601400 . C T 596.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.658;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=5.480;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.05;ReadPosRankSum=0.736;SOR=1.459 GT:AD:DP:GQ:PL 0/1:11,24:35:99:625,0,252 chr1 119601526 . C T 275.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.572;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=4.559;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.03;ReadPosRankSum=-1.570;SOR=0.128 GT:AD:DP:GQ:PL 0/1:14,11:25:99:304,0,476 chr1 119603418 . T C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.12;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 119603419 . G C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.02;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 119606364 . G T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.57;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 119606370 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.77;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 119606371 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.92;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 119608326 . T C 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-0.842;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 119622564 . G A 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=0.566;SOR=1.492 GT:AD:DP:GQ:PL 0/1:3,4:7:70:112,0,70 chr1 119623203 . C T 2022.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.398;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=1.898;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.92;ReadPosRankSum=0.020;SOR=0.866 GT:AD:DP:GQ:PL 0/1:123,81:204:99:2051,0,3535 chr1 119624058 . G A 2886.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.294;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=1.121;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.73;ReadPosRankSum=-1.225;SOR=0.682 GT:AD:DP:GQ:PL 0/1:83,113:196:99:2915,0,2112 chr1 119624311 . T C 220.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.98;ReadPosRankSum=-0.026;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,7:13:99:249,0,211 chr1 119711883 . A G 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=0.533;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,259 chr1 119711922 . G C 348.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.714;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.63;ReadPosRankSum=1.217;SOR=0.095 GT:AD:DP:GQ:PL 0/1:18,12:30:99:377,0,661 chr1 119721020 . T C 1034.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.821;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=2.542;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.77;ReadPosRankSum=-0.904;SOR=0.395 GT:AD:DP:GQ:PL 0/1:44,37:81:99:1063,0,1390 chr1 119724882 . C G 2225.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.531;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=1.915;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.25;ReadPosRankSum=-1.023;SOR=0.804 GT:AD:DP:GQ:PL 0/1:84,84:168:99:2254,0,2322 chr1 119727368 . C G 119.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.96;ReadPosRankSum=-0.431;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:53:148,0,53 chr1 119740626 . A G 571.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.436;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.34;ReadPosRankSum=0.802;SOR=1.609 GT:AD:DP:GQ:PL 0/1:18,17:35:99:600,0,608 chr1 119742046 . A T 305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.921;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=4.472;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.84;ReadPosRankSum=-0.922;SOR=2.833 GT:AD:DP:GQ:PL 0/1:5,9:14:99:334,0,155 chr1 119742923 . G A 1280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.276;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=4.735;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.44;ReadPosRankSum=-0.522;SOR=1.140 GT:AD:DP:GQ:PL 0/1:61,51:112:99:1309,0,1518 chr1 119743834 . G T 570.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.687;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=6.303;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.43;ReadPosRankSum=-0.605;SOR=2.833 GT:AD:DP:GQ:PL 0/1:20,17:37:99:599,0,608 chr1 119744318 . G A 331.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.849;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.70;ReadPosRankSum=1.129;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,9:14:99:360,0,286 chr1 119744327 . T C 337.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.660;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=30.71;ReadPosRankSum=0.863;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,8:11:99:366,0,212 chr1 119750546 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 119750744 . T C 1098.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.209;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=3.093;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.40;ReadPosRankSum=0.297;SOR=0.410 GT:AD:DP:GQ:PL 0/1:40,42:82:99:1127,0,1084 chr1 119751125 . T G 370.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.706;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.092;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.66;ReadPosRankSum=-0.475;SOR=1.371 GT:AD:DP:GQ:PL 0/1:8,13:21:99:399,0,203 chr1 119768418 . G A 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.94;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 119782372 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 119792730 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 119792740 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 119794253 . T G 2673.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.83;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2702,252,0 chr1 119794761 . T C 1601.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.75;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1630,132,0 chr1 119794780 . A G 1160.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.51;SOR=3.981 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1189,93,0 chr1 119798295 . G A 805.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:834,60,0 chr1 119798633 . G A 2552.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.687;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.26;ReadPosRankSum=-1.752;SOR=0.750 GT:AD:DP:GQ:PL 0/1:84,95:179:99:2581,0,2310 chr1 119836055 . C T 4753.77 PASS AC=2;AF=1.00;AN=2;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.71;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,160:160:99:4782,479,0 chr1 119837114 . G A 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.27;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr1 119837385 . T A 981.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.67;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1010,93,0 chr1 119839498 . C T 222.84 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.49;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 119841582 . A G 2802.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.97;SOR=1.528 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2831,255,0 chr1 119842154 . G T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 119842162 . C A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.44;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 119844497 . G A 1464.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.06;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1493,128,0 chr1 119844753 . A G 378.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.69;QD=29.14;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:39:407,39,0 chr1 119847448 . T C 245.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.61;QD=27.31;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:27:274,27,0 chr1 119853291 . C T 407.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.13;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:42:436,42,0 chr1 119861991 . T C 368.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.73;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,12:12:36:397,36,0 chr1 119915647 . G C 4053.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.496;ClippingRankSum=0.000;DP=302;ExcessHet=3.0103;FS=1.926;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.42;ReadPosRankSum=0.920;SOR=0.814 GT:AD:DP:GQ:PL 0/1:159,143:302:99:4082,0,4538 chr1 119917407 . G A 332.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.51;ReadPosRankSum=-1.476;SOR=0.793 GT:AD:DP:GQ:PL 0/1:9,10:19:99:361,0,319 chr1 119921518 . A C 425.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.030;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.90;ReadPosRankSum=0.426;SOR=1.276 GT:AD:DP:GQ:PL 0/1:29,14:43:99:454,0,1048 chr1 119925253 . G A 1052.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.587;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=3.372;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.53;ReadPosRankSum=-1.854;SOR=1.151 GT:AD:DP:GQ:PL 0/1:47,37:84:99:1081,0,1404 chr1 119925511 . C T 3316.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.683;ClippingRankSum=0.000;DP=276;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.02;ReadPosRankSum=0.847;SOR=0.690 GT:AD:DP:GQ:PL 0/1:145,131:276:99:3345,0,4161 chr1 119925864 . T C 1065.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.371;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=0.714;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.96;ReadPosRankSum=-0.827;SOR=0.824 GT:AD:DP:GQ:PL 0/1:74,45:119:99:1094,0,1992 chr1 119928801 . C T 828.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.54;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,22:22:66:857,66,0 chr1 119935662 . T C 2324.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.70;SOR=2.483 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2353,201,0 chr1 119937771 . T C 842.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.41;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,22:22:66:871,66,0 chr1 119951403 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 119955463 . G C 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.85;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 119963373 . G C 1384.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.20;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1413,128,0 chr1 119969481 . T C 2052.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.29;SOR=3.690 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2081,168,0 chr1 120168929 . T C 590.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.872;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.74;MQRankSum=-7.065;QD=9.09;ReadPosRankSum=-0.168;SOR=0.732 GT:AD:DP:GQ:PL 0/1:42,23:65:99:619,0,1009 chr1 120197044 . A G 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.851;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=5.204;MLEAC=1;MLEAF=0.500;MQ=46.32;MQRankSum=-4.750;QD=4.05;ReadPosRankSum=-1.664;SOR=2.055 GT:AD:DP:GQ:PL 0/1:27,9:36:99:174,0,883 chr1 120197592 . G A 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.645;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.76;MQRankSum=-1.645;QD=16.15;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:109,0,34 chr1 120341575 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.80;QD=34.78;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 120435541 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 120449388 . G A 2402.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.459;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=15.280;MLEAC=1;MLEAF=0.500;MQ=45.01;MQRankSum=2.063;QD=30.41;ReadPosRankSum=2.107;SOR=0.078 GT:AD:DP:GQ:PL 0/1:19,60:79:99:2431,0,609 chr1 120449389 . A G 2402.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.119;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=12.915;MLEAC=1;MLEAF=0.500;MQ=44.77;MQRankSum=2.484;QD=31.20;ReadPosRankSum=2.147;SOR=0.094 GT:AD:DP:GQ:PL 0/1:18,59:77:99:2431,0,609 chr1 120449395 . C G 276.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.067;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=11.788;MLEAC=1;MLEAF=0.500;MQ=44.58;MQRankSum=-3.994;QD=3.95;ReadPosRankSum=-2.403;SOR=2.527 GT:AD:DP:GQ:PL 0/1:55,15:70:99:305,0,2306 chr1 120453547 . T C 109.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.621;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=9.221;MLEAC=1;MLEAF=0.500;MQ=55.85;MQRankSum=-5.774;QD=2.49;ReadPosRankSum=-0.120;SOR=0.061 GT:AD:DP:GQ:PL 0/1:38,6:44:99:138,0,1564 chr1 120453552 . A G 112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.335;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=8.963;MLEAC=1;MLEAF=0.500;MQ=56.32;MQRankSum=-6.029;QD=2.62;ReadPosRankSum=0.158;SOR=0.064 GT:AD:DP:GQ:PL 0/1:37,6:43:99:141,0,1536 chr1 120460584 . G A 1481.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.151;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=1.387;MLEAC=1;MLEAF=0.500;MQ=44.75;MQRankSum=0.234;QD=11.23;ReadPosRankSum=-1.301;SOR=0.551 GT:AD:DP:GQ:PL 0/1:70,62:132:99:1510,0,1769 chr1 120462305 . A T 106.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.349;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.58;MQRankSum=-3.224;QD=8.90;ReadPosRankSum=0.124;SOR=0.760 GT:AD:DP:GQ:PL 0/1:7,5:12:99:135,0,222 chr1 120463052 . C A 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.618;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.93;MQRankSum=1.273;QD=10.57;ReadPosRankSum=-1.590;SOR=0.527 GT:AD:DP:GQ:PL 0/1:9,8:17:99:208,0,223 chr1 120466107 . C G 1651.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.338;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=1.268;MLEAC=1;MLEAF=0.500;MQ=59.98;MQRankSum=0.000;QD=10.52;ReadPosRankSum=1.606;SOR=0.570 GT:AD:DP:GQ:PL 0/1:90,67:157:99:1680,0,2453 chr1 120489671 . C G 619.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.238;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.57;MQRankSum=-3.043;QD=15.49;ReadPosRankSum=-1.266;SOR=0.879 GT:AD:DP:GQ:PL 0/1:17,23:40:99:648,0,454 chr1 120489796 . T G 2194.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.27;QD=32.76;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2223,200,0 chr1 120491393 . C T 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.80;MQRankSum=-0.253;QD=17.96;ReadPosRankSum=0.524;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr1 120491981 . A G 2737.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.13;QD=30.42;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2766,269,0 chr1 120492092 . C T 554.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.634;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.60;MQRankSum=1.412;QD=12.90;ReadPosRankSum=0.127;SOR=0.767 GT:AD:DP:GQ:PL 0/1:23,20:43:99:583,0,668 chr1 120500922 . A G 70.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.106;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.40;MQRankSum=-3.350;QD=3.54;ReadPosRankSum=-0.421;SOR=1.051 GT:AD:DP:GQ:PL 0/1:15,5:20:99:99,0,430 chr1 120500999 . C T 193.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.739;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=3.682;MLEAC=1;MLEAF=0.500;MQ=44.57;MQRankSum=-4.076;QD=7.75;ReadPosRankSum=0.900;SOR=1.152 GT:AD:DP:GQ:PL 0/1:14,11:25:99:222,0,400 chr1 120506029 . G A 734.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.391;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.53;MQRankSum=0.487;QD=21.61;ReadPosRankSum=2.729;SOR=0.446 GT:AD:DP:GQ:PL 0/1:13,21:34:99:763,0,411 chr1 120512015 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.61;MQRankSum=0.431;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 120512367 . T C 391.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.195;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=1.805;MLEAC=1;MLEAF=0.500;MQ=52.97;MQRankSum=-6.145;QD=8.00;ReadPosRankSum=0.980;SOR=0.243 GT:AD:DP:GQ:PL 0/1:34,15:49:99:420,0,1101 chr1 120512604 . C T 418.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.982;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=8.029;MLEAC=1;MLEAF=0.500;MQ=51.54;MQRankSum=-7.161;QD=5.23;ReadPosRankSum=0.453;SOR=1.843 GT:AD:DP:GQ:PL 0/1:60,20:80:99:447,0,1754 chr1 120557896 . T A 515.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.577;ClippingRankSum=0.000;DP=178;ExcessHet=3.0103;FS=49.325;MLEAC=1;MLEAF=0.500;MQ=48.01;MQRankSum=-4.681;QD=2.90;ReadPosRankSum=-1.728;SOR=3.908 GT:AD:DP:GQ:PL 0/1:148,30:178:99:544,0,4281 chr1 120724152 . A C 520.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.02;QD=27.99;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:39:549,39,0 chr1 120784750 . A C 231.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.11;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:260,21,0 chr1 120793448 . A T 6165.77 PASS AC=2;AF=1.00;AN=2;DP=185;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.83;QD=33.51;SOR=1.424 GT:AD:DP:GQ:PL 1/1:0,184:184:99:6194,552,0 chr1 120805654 . G C 791.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.85;QD=34.42;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:69:820,69,0 chr1 120808420 . A C 187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.37;MQRankSum=-1.581;QD=10.43;ReadPosRankSum=0.533;SOR=0.255 GT:AD:DP:GQ:PL 0/1:12,6:18:99:216,0,473 chr1 120808423 . G A 210.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.21;MQRankSum=-2.143;QD=11.71;ReadPosRankSum=-0.172;SOR=0.368 GT:AD:DP:GQ:PL 0/1:11,7:18:99:239,0,470 chr1 120808586 . C T 284.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.820;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.14;MQRankSum=2.363;QD=8.63;ReadPosRankSum=-2.199;SOR=0.573 GT:AD:DP:GQ:PL 0/1:19,14:33:99:313,0,526 chr1 120809853 . A C 379.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.134;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=3.940;MLEAC=1;MLEAF=0.500;MQ=46.57;MQRankSum=-5.835;QD=4.63;ReadPosRankSum=-2.002;SOR=1.257 GT:AD:DP:GQ:PL 0/1:67,15:82:99:408,0,4215 chr1 120809863 . A G 426.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.165;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=2.321;MLEAC=1;MLEAF=0.500;MQ=47.53;MQRankSum=-5.921;QD=5.02;ReadPosRankSum=-2.121;SOR=1.052 GT:AD:DP:GQ:PL 0/1:69,16:85:99:455,0,4691 chr1 120809865 . T G 370.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.443;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=1.165;MLEAC=1;MLEAF=0.500;MQ=47.95;MQRankSum=-5.475;QD=4.36;ReadPosRankSum=-1.844;SOR=0.960 GT:AD:DP:GQ:PL 0/1:70,15:85:99:399,0,4706 chr1 120809867 . G A 384.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.078;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=3.984;MLEAC=1;MLEAF=0.500;MQ=48.26;MQRankSum=-5.883;QD=4.42;ReadPosRankSum=-1.284;SOR=1.310 GT:AD:DP:GQ:PL 0/1:72,15:87:99:413,0,4667 chr1 120810008 . T A 525.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.467;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.98;MQRankSum=-3.034;QD=9.56;ReadPosRankSum=1.324;SOR=0.542 GT:AD:DP:GQ:PL 0/1:39,16:55:99:554,0,2350 chr1 120810009 . C T 525.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.213;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.98;MQRankSum=-3.034;QD=9.56;ReadPosRankSum=1.324;SOR=0.542 GT:AD:DP:GQ:PL 0/1:39,16:55:99:554,0,2350 chr1 120810230 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=46.47;MQRankSum=-1.645;QD=10.55;ReadPosRankSum=-1.645;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:69:81,0,69 chr1 120810263 . C T 57.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=43.96;MQRankSum=-2.450;QD=7.22;ReadPosRankSum=-1.415;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:86:86,0,143 chr1 120814790 . C T 1241.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.59;QD=31.04;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1270,120,0 chr1 120823517 . C G 109.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.24;QD=27.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:137,12,0 chr1 120829725 . C A 184.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.473;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=46.68;MQRankSum=-2.804;QD=4.40;ReadPosRankSum=-0.752;SOR=0.791 GT:AD:DP:GQ:PL 0/1:31,11:42:99:213,0,772 chr1 120829841 . T G 172.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.447;MLEAC=1;MLEAF=0.500;MQ=40.14;MQRankSum=-0.390;QD=11.52;ReadPosRankSum=-2.016;SOR=0.223 GT:AD:DP:GQ:PL 0/1:8,7:15:99:201,0,254 chr1 120840701 . T G 640.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.09;QD=29.72;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:669,51,0 chr1 120889787 . C T 2026.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.91;QD=33.23;SOR=1.850 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2055,183,0 chr1 120897038 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.07;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 120897072 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.57;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 120897158 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.05;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 120913142 . C A 80.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.01;QD=26.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0 chr1 120913178 . C T 80.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.01;QD=26.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0 chr1 120931862 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.25;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 120931939 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.01;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 120942451 . T C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.02;MQRankSum=-0.674;QD=12.69;ReadPosRankSum=-0.674;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 120966154 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.03;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 120966303 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 121087628 . G A 181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.54;MQRankSum=1.154;QD=11.36;ReadPosRankSum=1.440;SOR=0.412 GT:AD:DP:GQ:PL 0/1:9,7:16:99:210,0,282 chr1 121096208 . G A 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.803;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=48.14;MQRankSum=0.457;QD=10.88;ReadPosRankSum=-0.728;SOR=2.303 GT:AD:DP:GQ:PL 0/1:6,4:10:99:137,0,152 chr1 121118165 . G T 3465.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.38;QD=33.65;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3494,309,0 chr1 121118455 . A G 3570.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.38;QD=28.85;SOR=3.160 GT:AD:DP:GQ:PL 1/1:0,90:90:99:3599,271,0 chr1 121174642 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.24;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 121305306 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 121374817 . C T 1339.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.208;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=46.03;MQRankSum=-6.437;QD=16.75;ReadPosRankSum=0.647;SOR=0.660 GT:AD:DP:GQ:PL 0/1:44,36:80:99:1368,0,2777 chr1 121374827 . A G 1509.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.854;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=45.97;MQRankSum=-7.072;QD=17.35;ReadPosRankSum=0.814;SOR=0.653 GT:AD:DP:GQ:PL 0/1:46,41:87:99:1538,0,2856 chr1 121375072 . T C 281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.479;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=1.868;MLEAC=1;MLEAF=0.500;MQ=59.03;MQRankSum=-2.754;QD=7.41;ReadPosRankSum=0.018;SOR=1.118 GT:AD:DP:GQ:PL 0/1:27,11:38:99:310,0,895 chr1 121375092 . A G 193.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.026;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.38;MQRankSum=-2.683;QD=8.42;ReadPosRankSum=0.266;SOR=0.693 GT:AD:DP:GQ:PL 0/1:16,7:23:99:222,0,565 chr1 121396690 . A G 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=27.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr1 121550773 . C A 60.96 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=20.32;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 1/1:1,2:3:5:88,5,0 chr1 123513178 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.50;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 123513194 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.50;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 123531506 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 123929969 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.39;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 123929993 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.39;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 124377297 . G T 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.82;MQRankSum=-1.960;QD=7.46;ReadPosRankSum=-0.598;SOR=0.991 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,73 chr1 125063845 . C A 38.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.319;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.26;MQRankSum=-0.319;QD=4.85;ReadPosRankSum=-1.534;SOR=0.818 GT:AD:DP:GQ:PL 0/1:5,3:8:67:67,0,117 chr1 125151096 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.95;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 125151102 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.95;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 125151120 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.95;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 125151121 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.95;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 125151129 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.95;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 125151133 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.95;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 125151134 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.95;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 143542957 . C T 186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.207;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=-0.191;SOR=2.925 GT:AD:DP:GQ:PL 0/1:6,6:12:99:215,0,180 chr1 143544364 . C T 752.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.544;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.863;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.18;ReadPosRankSum=-0.844;SOR=0.519 GT:AD:DP:GQ:PL 0/1:50,32:82:99:781,0,1415 chr1 143544453 . T C 502.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.409;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=1.399;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=-0.491;SOR=0.996 GT:AD:DP:GQ:PL 0/1:20,17:37:99:531,0,508 chr1 143552308 . T C 165.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.210;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.58;ReadPosRankSum=0.610;SOR=1.022 GT:AD:DP:GQ:PL 0/1:3,7:10:61:194,0,61 chr1 143554604 . G A 518.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.546;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.82;ReadPosRankSum=0.879;SOR=1.436 GT:AD:DP:GQ:PL 0/1:19,16:35:99:547,0,650 chr1 143554815 . T G 2141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.200;ClippingRankSum=0.000;DP=177;ExcessHet=3.0103;FS=3.546;MLEAC=1;MLEAF=0.500;MQ=59.98;MQRankSum=-1.041;QD=12.10;ReadPosRankSum=-2.519;SOR=0.980 GT:AD:DP:GQ:PL 0/1:93,84:177:99:2170,0,2046 chr1 143555022 . T C 119.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.96;ReadPosRankSum=-0.431;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:148,0,65 chr1 143555056 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:72,0,71 chr1 143555803 . A G 236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.541;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.29;ReadPosRankSum=0.894;SOR=0.665 GT:AD:DP:GQ:PL 0/1:15,8:23:99:265,0,415 chr1 143567427 . G A 490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.026;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=1.435;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.67;ReadPosRankSum=-1.384;SOR=0.354 GT:AD:DP:GQ:PL 0/1:27,19:46:99:519,0,787 chr1 143595303 . C A 490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.410;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=1.087;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.76;ReadPosRankSum=0.959;SOR=0.478 GT:AD:DP:GQ:PL 0/1:36,20:56:99:519,0,1031 chr1 143596213 . C T 77.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.64;ReadPosRankSum=0.589;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,4:9:99:106,0,136 chr1 143611176 . G T 368.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.521;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.41;ReadPosRankSum=-0.373;SOR=0.317 GT:AD:DP:GQ:PL 0/1:8,11:19:99:397,0,245 chr1 143611419 . A C 850.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.72;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,26:26:78:879,78,0 chr1 143766440 . A G 553.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=45.99;QD=33.68;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:582,45,0 chr1 143766539 . C G 344.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.170;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.17;MQRankSum=0.273;QD=9.07;ReadPosRankSum=0.280;SOR=0.732 GT:AD:DP:GQ:PL 0/1:23,15:38:99:373,0,588 chr1 143795690 . T C 74.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.501;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=49.91;MQRankSum=0.405;QD=7.48;ReadPosRankSum=-0.842;SOR=0.078 GT:AD:DP:GQ:PL 0/1:6,4:10:99:103,0,209 chr1 143835760 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.89;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 143835761 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.89;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 143884651 . G A 742.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.223;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=3.704;MLEAC=1;MLEAF=0.500;MQ=42.50;MQRankSum=0.192;QD=13.50;ReadPosRankSum=-0.728;SOR=1.214 GT:AD:DP:GQ:PL 0/1:24,31:55:99:771,0,644 chr1 143885089 . T A 104.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.961;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=9.425;MLEAC=1;MLEAF=0.500;MQ=50.09;MQRankSum=-2.605;QD=5.82;ReadPosRankSum=0.000;SOR=3.352 GT:AD:DP:GQ:PL 0/1:13,5:18:99:133,0,326 chr1 143885124 . C T 238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.039;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=14.236;MLEAC=1;MLEAF=0.500;MQ=52.79;MQRankSum=2.989;QD=13.26;ReadPosRankSum=-0.338;SOR=0.587 GT:AD:DP:GQ:PL 0/1:6,12:18:99:267,0,183 chr1 143885155 . A C 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.938;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=12.420;MLEAC=1;MLEAF=0.500;MQ=53.48;MQRankSum=-2.886;QD=8.25;ReadPosRankSum=-0.465;SOR=2.530 GT:AD:DP:GQ:PL 0/1:12,7:19:99:185,0,342 chr1 143885210 . C T 237.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.412;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=1.958;MLEAC=1;MLEAF=0.500;MQ=54.33;MQRankSum=2.664;QD=13.21;ReadPosRankSum=-1.349;SOR=0.293 GT:AD:DP:GQ:PL 0/1:7,11:18:99:266,0,167 chr1 143904542 . T C 573.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-4.252;ClippingRankSum=0.000;DP=223;ExcessHet=3.0103;FS=2.770;MLEAC=1;MLEAF=0.500;MQ=54.80;MQRankSum=-12.407;QD=2.57;ReadPosRankSum=2.917;SOR=0.589 GT:AD:DP:GQ:PL 0/1:172,51:223:99:602,0,4534 chr1 144104365 . C T 119.84 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.92;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr1 144104599 . G T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,116 chr1 144104658 . G A 158.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.88;MQRankSum=0.000;QD=26.46;ReadPosRankSum=-0.210;SOR=0.368 GT:AD:DP:GQ:PL 0/1:1,5:6:59:187,0,59 chr1 144104659 . C G 158.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.88;MQRankSum=0.000;QD=26.46;ReadPosRankSum=-0.210;SOR=0.368 GT:AD:DP:GQ:PL 0/1:1,5:6:59:187,0,59 chr1 144426381 . C T 1654.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.96;QD=30.64;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1683,162,0 chr1 144435669 . T A 107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.511;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=7.403;MLEAC=1;MLEAF=0.500;MQ=43.70;MQRankSum=-3.363;QD=2.00;ReadPosRankSum=1.170;SOR=2.749 GT:AD:DP:GQ:PL 0/1:45,9:54:99:136,0,1228 chr1 144440484 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 144904956 . T A 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.589;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.730;MLEAC=1;MLEAF=0.500;MQ=48.21;MQRankSum=-3.758;QD=5.56;ReadPosRankSum=-0.366;SOR=1.483 GT:AD:DP:GQ:PL 0/1:14,7:21:99:145,0,453 chr1 145309499 . G C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.07;QD=32.71;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 145309501 . G C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.07;QD=25.64;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 145400543 . T C 947.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.295;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=4.606;MLEAC=1;MLEAF=0.500;MQ=49.93;MQRankSum=0.687;QD=12.15;ReadPosRankSum=-0.906;SOR=1.284 GT:AD:DP:GQ:PL 0/1:45,33:78:99:976,0,1185 chr1 145404993 . C G 610.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.335;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=2.011;MLEAC=1;MLEAF=0.500;MQ=56.66;MQRankSum=-4.463;QD=14.90;ReadPosRankSum=-3.023;SOR=1.220 GT:AD:DP:GQ:PL 0/1:24,17:41:99:639,0,1486 chr1 145404999 . C T 646.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.610;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.981;MLEAC=1;MLEAF=0.500;MQ=56.97;MQRankSum=-4.548;QD=14.37;ReadPosRankSum=-2.306;SOR=1.508 GT:AD:DP:GQ:PL 0/1:27,18:45:99:675,0,1567 chr1 145405000 . A G 646.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.209;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.981;MLEAC=1;MLEAF=0.500;MQ=56.97;MQRankSum=-4.548;QD=14.37;ReadPosRankSum=-2.260;SOR=1.508 GT:AD:DP:GQ:PL 0/1:27,18:45:99:675,0,1567 chr1 145405001 . A G 646.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.548;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.981;MLEAC=1;MLEAF=0.500;MQ=56.97;MQRankSum=-4.548;QD=14.37;ReadPosRankSum=-2.225;SOR=1.508 GT:AD:DP:GQ:PL 0/1:27,18:45:99:675,0,1567 chr1 145405003 . A G 974.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.645;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.981;MLEAC=1;MLEAF=0.500;MQ=56.97;MQRankSum=-4.548;QD=21.66;ReadPosRankSum=-2.121;SOR=1.508 GT:AD:DP:GQ:PL 0/1:27,18:45:99:1003,0,1578 chr1 145405011 . A C 1082.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.550;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.02;MQRankSum=-4.349;QD=17.46;ReadPosRankSum=-2.954;SOR=0.693 GT:AD:DP:GQ:PL 0/1:31,31:62:99:1111,0,1631 chr1 145405167 . C T 817.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.298;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=16.542;MLEAC=1;MLEAF=0.500;MQ=53.03;MQRankSum=-5.054;QD=8.89;ReadPosRankSum=-0.208;SOR=2.285 GT:AD:DP:GQ:PL 0/1:61,31:92:99:846,0,1780 chr1 145405180 . G C 619.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.155;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=21.374;MLEAC=1;MLEAF=0.500;MQ=51.51;MQRankSum=-5.663;QD=7.85;ReadPosRankSum=1.090;SOR=3.180 GT:AD:DP:GQ:PL 0/1:57,22:79:99:648,0,1654 chr1 145405191 . A G 588.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.035;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=30.545;MLEAC=1;MLEAF=0.500;MQ=50.95;MQRankSum=-5.174;QD=7.55;ReadPosRankSum=1.011;SOR=4.994 GT:AD:DP:GQ:PL 0/1:59,19:78:99:617,0,3081 chr1 145405199 . C T 555.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.620;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=27.202;MLEAC=1;MLEAF=0.500;MQ=50.74;MQRankSum=-5.079;QD=7.41;ReadPosRankSum=0.151;SOR=4.712 GT:AD:DP:GQ:PL 0/1:57,18:75:99:584,0,3041 chr1 145405210 . G A 472.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.680;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=24.416;MLEAC=1;MLEAF=0.500;MQ=49.96;MQRankSum=-4.753;QD=6.75;ReadPosRankSum=-1.027;SOR=4.514 GT:AD:DP:GQ:PL 0/1:53,17:70:99:501,0,1524 chr1 145454020 . C A 3233.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.230;ClippingRankSum=0.000;DP=238;ExcessHet=3.0103;FS=7.591;MLEAC=1;MLEAF=0.500;MQ=56.79;MQRankSum=0.978;QD=13.64;ReadPosRankSum=-0.171;SOR=0.375 GT:AD:DP:GQ:PL 0/1:114,123:237:99:3262,0,3256 chr1 145459334 . C G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 145518604 . A T 300.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.878;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=3.556;MLEAC=1;MLEAF=0.500;MQ=57.58;MQRankSum=1.442;QD=10.74;ReadPosRankSum=0.695;SOR=0.531 GT:AD:DP:GQ:PL 0/1:17,11:28:99:329,0,455 chr1 145548815 . T C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 145574212 . C G 4767.77 PASS AC=2;AF=1.00;AN=2;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.23;QD=32.88;SOR=1.710 GT:AD:DP:GQ:PL 1/1:0,145:145:99:4796,435,0 chr1 145574818 . C T 241.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.218;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=17.433;MLEAC=1;MLEAF=0.500;MQ=40.34;MQRankSum=-3.702;QD=12.72;ReadPosRankSum=1.105;SOR=4.977 GT:AD:DP:GQ:PL 0/1:8,11:19:99:270,0,218 chr1 145581068 . T A 71.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.70;QD=23.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:99,9,0 chr1 145587770 . T C 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=8.195;MLEAC=1;MLEAF=0.500;MQ=44.37;MQRankSum=-2.731;QD=6.98;ReadPosRankSum=0.628;SOR=0.027 GT:AD:DP:GQ:PL 0/1:7,5:12:99:112,0,248 chr1 145588070 . A G 1570.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.069;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.787;MLEAC=1;MLEAF=0.500;MQ=48.17;MQRankSum=-7.722;QD=16.71;ReadPosRankSum=-2.675;SOR=0.593 GT:AD:DP:GQ:PL 0/1:36,58:94:99:1599,0,971 chr1 145687602 . G A 235.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.414;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.65;ReadPosRankSum=-0.191;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,8:12:99:264,0,118 chr1 145728029 . A T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 145731497 . C A 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 145738392 . C T 213.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.824;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=3.580;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=-0.159;SOR=1.473 GT:AD:DP:GQ:PL 0/1:25,9:34:99:242,0,624 chr1 145751751 . C G 233.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.38;ReadPosRankSum=-0.728;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,7:10:95:262,0,95 chr1 145784573 . C T 854.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.009;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.038;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.25;ReadPosRankSum=-0.730;SOR=0.902 GT:AD:DP:GQ:PL 0/1:28,32:60:99:883,0,751 chr1 145791136 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 145837693 . G T 1226.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.560;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.78;ReadPosRankSum=-1.776;SOR=0.665 GT:AD:DP:GQ:PL 0/1:42,41:83:99:1255,0,1254 chr1 145840311 . A G 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=1.379;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,8:16:99:218,0,218 chr1 145845552 . C G 470.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.305;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.480;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.45;ReadPosRankSum=1.086;SOR=0.420 GT:AD:DP:GQ:PL 0/1:18,17:35:99:499,0,456 chr1 145846532 . A G 3103.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.874;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.07;ReadPosRankSum=0.565;SOR=0.709 GT:AD:DP:GQ:PL 0/1:99,107:206:99:3132,0,2610 chr1 145846884 . A G 593.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.982;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=0.655;SOR=0.618 GT:AD:DP:GQ:PL 0/1:27,22:49:99:622,0,717 chr1 145848288 . A G 3956.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.001;ClippingRankSum=0.000;DP=308;ExcessHet=3.0103;FS=2.452;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=1.082;SOR=0.552 GT:AD:DP:GQ:PL 0/1:156,152:308:99:3985,0,4128 chr1 145867640 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-0.385;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 145868551 . G A 1072.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.741;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=2.899;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.55;ReadPosRankSum=0.112;SOR=1.220 GT:AD:DP:GQ:PL 0/1:34,35:69:99:1101,0,1000 chr1 145872200 . A G 1491.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.254;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=0.733;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.63;ReadPosRankSum=0.343;SOR=0.784 GT:AD:DP:GQ:PL 0/1:53,49:102:99:1520,0,1447 chr1 145872788 . G C 4544.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.779;ClippingRankSum=0.000;DP=286;ExcessHet=3.0103;FS=0.913;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.00;ReadPosRankSum=-1.572;SOR=0.628 GT:AD:DP:GQ:PL 0/1:120,164:284:99:4573,0,3327 chr1 145872994 . T C 7854.77 PASS AC=2;AF=1.00;AN=2;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.60;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,219:219:99:7883,657,0 chr1 145873487 . G A 6694.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.434;ClippingRankSum=0.000;DP=496;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.52;ReadPosRankSum=-1.641;SOR=0.677 GT:AD:DP:GQ:PL 0/1:245,250:495:99:6723,0,7015 chr1 145874073 . C A 2292.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.174;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=0.708;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.11;ReadPosRankSum=-1.709;SOR=0.591 GT:AD:DP:GQ:PL 0/1:43,77:120:99:2321,0,1128 chr1 145874605 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 145875906 . G A 318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.629;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=3.736;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.26;ReadPosRankSum=0.356;SOR=0.112 GT:AD:DP:GQ:PL 0/1:15,11:26:99:347,0,531 chr1 145876257 . T G 2762.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.006;ClippingRankSum=0.000;DP=223;ExcessHet=3.0103;FS=5.742;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.39;ReadPosRankSum=-3.244;SOR=1.076 GT:AD:DP:GQ:PL 0/1:116,107:223:99:2791,0,3089 chr1 145876488 . G A 2410.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.40;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2439,192,0 chr1 145878094 . G A 1281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.767;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.44;ReadPosRankSum=0.054;SOR=0.664 GT:AD:DP:GQ:PL 0/1:42,41:83:99:1310,0,1299 chr1 145896412 . C T 2508.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.665;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=5.434;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.61;ReadPosRankSum=-0.911;SOR=0.382 GT:AD:DP:GQ:PL 0/1:64,87:151:99:2537,0,1818 chr1 145899155 . G A 4423.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.390;ClippingRankSum=0.000;DP=317;ExcessHet=3.0103;FS=1.328;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.96;ReadPosRankSum=0.730;SOR=0.707 GT:AD:DP:GQ:PL 0/1:155,162:317:99:4452,0,4263 chr1 145899465 . C A 836.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.185;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-1.035;SOR=0.562 GT:AD:DP:GQ:PL 0/1:44,31:75:99:865,0,1375 chr1 145901762 . A G 732.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.856;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.04;ReadPosRankSum=1.105;SOR=0.668 GT:AD:DP:GQ:PL 0/1:43,30:73:99:761,0,1258 chr1 145901901 . A G 910.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.286;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=1.989;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.20;ReadPosRankSum=0.885;SOR=0.988 GT:AD:DP:GQ:PL 0/1:33,36:69:99:939,0,922 chr1 145902076 . A G 1339.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.334;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=1.293;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=28.51;ReadPosRankSum=-1.612;SOR=0.481 GT:AD:DP:GQ:PL 0/1:13,34:47:99:1368,0,714 chr1 145904824 . A G 6496.77 PASS AC=2;AF=1.00;AN=2;DP=215;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.36;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,214:214:99:6525,641,0 chr1 145917528 . G A 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=-0.241;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,224 chr1 145925815 . C A 346.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.212;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.98;MQRankSum=-0.528;QD=12.38;ReadPosRankSum=0.110;SOR=0.350 GT:AD:DP:GQ:PL 0/1:17,11:28:99:375,0,592 chr1 145927267 . T A 2074.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.574;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=8.533;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.65;ReadPosRankSum=-0.277;SOR=1.315 GT:AD:DP:GQ:PL 0/1:79,73:152:99:2103,0,2130 chr1 145957829 . G A 384.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.98;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:33:413,33,0 chr1 145957863 . C T 110.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.349;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=2.533;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.23;ReadPosRankSum=-1.150;SOR=0.707 GT:AD:DP:GQ:PL 0/1:7,5:12:99:139,0,222 chr1 145996488 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 146067922 . C T 185.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.40;QD=26.54;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:214,21,0 chr1 146069630 . G C 1158.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.17;QD=27.59;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1187,126,0 chr1 146069686 . C T 939.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.27;QD=29.37;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,32:32:96:968,96,0 chr1 146069742 . T C 545.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.83;QD=32.10;SOR=2.179 GT:AD:DP:GQ:PL 1/1:0,17:17:51:574,51,0 chr1 146081049 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.36;MQRankSum=0.967;QD=17.59;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:81:81,0,172 chr1 146121874 . C T 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.368;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.37;MQRankSum=0.328;QD=5.97;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,134 chr1 146125974 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 146126409 . G C 1230.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.37;QD=33.99;SOR=2.649 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1259,105,0 chr1 146136339 . T C 336.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.364;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=10.807;MLEAC=1;MLEAF=0.500;MQ=41.91;MQRankSum=2.267;QD=8.21;ReadPosRankSum=-1.701;SOR=3.173 GT:AD:DP:GQ:PL 0/1:31,10:41:99:365,0,1269 chr1 146136344 . T C 351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.370;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=6.085;MLEAC=1;MLEAF=0.500;MQ=43.67;MQRankSum=2.531;QD=7.82;ReadPosRankSum=-1.612;SOR=1.911 GT:AD:DP:GQ:PL 0/1:33,12:45:99:380,0,1343 chr1 146136524 . A G 315.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.958;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=7.958;MLEAC=1;MLEAF=0.500;MQ=42.11;MQRankSum=-2.058;QD=3.71;ReadPosRankSum=-1.841;SOR=1.777 GT:AD:DP:GQ:PL 0/1:68,17:85:99:344,0,1877 chr1 146140387 . C T 2000.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.43;QD=29.42;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2029,204,0 chr1 146228815 . G C 2060.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.63;QD=30.76;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2089,201,0 chr1 146578081 . A G 59.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.14;MQRankSum=-2.697;QD=4.60;ReadPosRankSum=1.352;SOR=0.223 GT:AD:DP:GQ:PL 0/1:9,4:13:88:88,0,327 chr1 146581169 . A G 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.121;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=9.278;MLEAC=1;MLEAF=0.500;MQ=54.31;MQRankSum=-3.653;QD=3.70;ReadPosRankSum=1.152;SOR=3.426 GT:AD:DP:GQ:PL 0/1:19,5:24:99:117,0,551 chr1 146641310 . A G 107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.80;MQRankSum=-1.501;QD=10.78;ReadPosRankSum=0.316;SOR=1.329 GT:AD:DP:GQ:PL 0/1:6,4:10:99:136,0,186 chr1 146649049 . C T 35.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.39;MQRankSum=-1.645;QD=7.15;ReadPosRankSum=0.524;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:64:64,0,105 chr1 146683552 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.04;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 146755550 . C G 67.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.431;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=4.102;MLEAC=1;MLEAF=0.500;MQ=48.35;MQRankSum=-2.948;QD=2.42;ReadPosRankSum=-1.207;SOR=0.072 GT:AD:DP:GQ:PL 0/1:22,6:28:96:96,0,760 chr1 146773688 . G A 202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.461;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.670;MLEAC=1;MLEAF=0.500;MQ=48.78;MQRankSum=-4.582;QD=6.34;ReadPosRankSum=-2.225;SOR=1.179 GT:AD:DP:GQ:PL 0/1:22,10:32:99:231,0,720 chr1 146794497 . A G 727.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.251;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=6.750;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.70;ReadPosRankSum=-0.120;SOR=1.405 GT:AD:DP:GQ:PL 0/1:42,26:68:99:756,0,1344 chr1 146807081 . G C 536.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.420;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.154;MLEAC=1;MLEAF=0.500;MQ=44.66;MQRankSum=0.672;QD=10.74;ReadPosRankSum=1.356;SOR=0.988 GT:AD:DP:GQ:PL 0/1:27,23:50:99:565,0,621 chr1 146807672 . A T 53.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.18;QD=17.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:81,9,0 chr1 146815615 . G A 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.96;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 146821097 . G A 627.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.638;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=2.304;MLEAC=1;MLEAF=0.500;MQ=42.99;MQRankSum=0.454;QD=11.01;ReadPosRankSum=-0.326;SOR=1.179 GT:AD:DP:GQ:PL 0/1:31,26:57:99:656,0,825 chr1 146821159 . C G 833.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.320;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.049;MLEAC=1;MLEAF=0.500;MQ=50.49;MQRankSum=-0.943;QD=13.90;ReadPosRankSum=-0.291;SOR=0.984 GT:AD:DP:GQ:PL 0/1:26,34:60:99:862,0,720 chr1 146821225 . C T 548.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.545;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=5.780;MLEAC=1;MLEAF=0.500;MQ=57.89;MQRankSum=0.417;QD=15.68;ReadPosRankSum=0.269;SOR=1.863 GT:AD:DP:GQ:PL 0/1:17,18:35:99:577,0,469 chr1 146823008 . C G 187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.494;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.92;MQRankSum=-5.123;QD=4.37;ReadPosRankSum=0.785;SOR=0.719 GT:AD:DP:GQ:PL 0/1:32,11:43:99:216,0,955 chr1 146831703 . G A 782.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.355;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=5.083;MLEAC=1;MLEAF=0.500;MQ=54.77;MQRankSum=-3.403;QD=13.98;ReadPosRankSum=-0.265;SOR=0.223 GT:AD:DP:GQ:PL 0/1:26,30:56:99:811,0,782 chr1 146831751 . A G 318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.833;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=3.854;MLEAC=1;MLEAF=0.500;MQ=46.69;MQRankSum=-3.607;QD=18.75;ReadPosRankSum=0.310;SOR=2.387 GT:AD:DP:GQ:PL 0/1:7,10:17:99:347,0,207 chr1 146832450 . C T 55.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.77;MQRankSum=-2.189;QD=7.97;ReadPosRankSum=0.842;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:84:84,0,146 chr1 146832640 . T C 1155.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.931;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=5.015;MLEAC=1;MLEAF=0.500;MQ=52.52;MQRankSum=-6.037;QD=11.33;ReadPosRankSum=1.897;SOR=0.354 GT:AD:DP:GQ:PL 0/1:54,48:102:99:1184,0,1395 chr1 146850412 . G C 201.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.00;MQRankSum=-1.447;QD=14.41;ReadPosRankSum=-0.886;SOR=0.693 GT:AD:DP:GQ:PL 0/1:7,7:14:99:230,0,240 chr1 146853322 . G T 521.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.363;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.12;MQRankSum=-5.574;QD=12.73;ReadPosRankSum=-0.032;SOR=0.458 GT:AD:DP:GQ:PL 0/1:23,18:41:99:550,0,769 chr1 146853411 . G A 1112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.505;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=0.755;MLEAC=1;MLEAF=0.500;MQ=50.02;MQRankSum=-3.736;QD=10.80;ReadPosRankSum=0.123;SOR=0.562 GT:AD:DP:GQ:PL 0/1:55,48:103:99:1141,0,1409 chr1 146854554 . C T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.748;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=44.40;MQRankSum=-3.067;QD=6.89;ReadPosRankSum=2.000;SOR=0.120 GT:AD:DP:GQ:PL 0/1:6,5:11:99:104,0,214 chr1 146855356 . G A 160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.815;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=9.269;MLEAC=1;MLEAF=0.500;MQ=48.58;MQRankSum=-5.302;QD=2.20;ReadPosRankSum=2.240;SOR=2.117 GT:AD:DP:GQ:PL 0/1:60,13:73:99:189,0,1590 chr1 146855419 . G A 383.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.682;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=3.230;MLEAC=1;MLEAF=0.500;MQ=43.68;MQRankSum=-5.884;QD=4.17;ReadPosRankSum=-1.560;SOR=1.189 GT:AD:DP:GQ:PL 0/1:68,24:92:99:412,0,1824 chr1 146865501 . C T 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.581;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=2.522;MLEAC=1;MLEAF=0.500;MQ=46.38;MQRankSum=-0.088;QD=3.14;ReadPosRankSum=-0.941;SOR=1.015 GT:AD:DP:GQ:PL 0/1:10,3:13:69:69,0,216 chr1 146885794 . C T 579.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.254;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=4.348;MLEAC=1;MLEAF=0.500;MQ=40.09;MQRankSum=-2.280;QD=11.83;ReadPosRankSum=-0.716;SOR=0.238 GT:AD:DP:GQ:PL 0/1:23,26:49:99:608,0,617 chr1 146960360 . G A 193.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.451;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=2.021;MLEAC=1;MLEAF=0.500;MQ=45.08;MQRankSum=-0.377;QD=7.45;ReadPosRankSum=-0.173;SOR=0.293 GT:AD:DP:GQ:PL 0/1:18,8:26:99:222,0,551 chr1 146962102 . G A 791.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.141;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=8.647;MLEAC=1;MLEAF=0.500;MQ=53.07;MQRankSum=0.191;QD=12.00;ReadPosRankSum=-2.490;SOR=1.697 GT:AD:DP:GQ:PL 0/1:38,28:66:99:820,0,1101 chr1 146962291 . G T 822.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.118;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=1.263;MLEAC=1;MLEAF=0.500;MQ=58.83;MQRankSum=0.846;QD=16.79;ReadPosRankSum=0.513;SOR=0.437 GT:AD:DP:GQ:PL 0/1:22,27:49:99:851,0,646 chr1 146963453 . G A 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.25;MQRankSum=-1.036;QD=16.35;ReadPosRankSum=0.674;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 146964432 . A G 2085.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.407;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=3.125;MLEAC=1;MLEAF=0.500;MQ=51.31;MQRankSum=-5.471;QD=15.11;ReadPosRankSum=-0.161;SOR=0.678 GT:AD:DP:GQ:PL 0/1:55,83:138:99:2114,0,1439 chr1 146964485 . A G 1697.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.422;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=0.743;MLEAC=1;MLEAF=0.500;MQ=48.37;MQRankSum=-7.659;QD=15.87;ReadPosRankSum=0.556;SOR=0.598 GT:AD:DP:GQ:PL 0/1:43,64:107:99:1726,0,1041 chr1 146964578 . C T 838.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.155;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.61;MQRankSum=-1.111;QD=20.46;ReadPosRankSum=-0.188;SOR=0.976 GT:AD:DP:GQ:PL 0/1:15,26:41:99:867,0,476 chr1 146966567 . G A 1917.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.75;QD=33.06;SOR=1.382 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1946,173,0 chr1 146968626 . T G 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.466;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=1.851;MLEAC=1;MLEAF=0.500;MQ=51.31;MQRankSum=-4.477;QD=11.24;ReadPosRankSum=0.732;SOR=1.445 GT:AD:DP:GQ:PL 0/1:14,10:24:99:298,0,342 chr1 146970956 . T C 132.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.711;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.47;MQRankSum=-3.224;QD=11.06;ReadPosRankSum=0.305;SOR=1.371 GT:AD:DP:GQ:PL 0/1:7,5:12:99:161,0,222 chr1 146972666 . A G 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.91;MQRankSum=-1.611;QD=9.10;ReadPosRankSum=1.465;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr1 146972854 . G A 573.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.198;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=2.497;MLEAC=1;MLEAF=0.500;MQ=44.63;MQRankSum=-4.390;QD=11.95;ReadPosRankSum=-0.910;SOR=0.499 GT:AD:DP:GQ:PL 0/1:25,23:48:99:602,0,732 chr1 146972960 . A G 640.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.043;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.64;MQRankSum=-2.895;QD=11.87;ReadPosRankSum=0.058;SOR=0.665 GT:AD:DP:GQ:PL 0/1:25,29:54:99:669,0,728 chr1 146984876 . T G 1147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.813;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=1.891;MLEAC=1;MLEAF=0.500;MQ=46.49;MQRankSum=0.691;QD=15.30;ReadPosRankSum=-0.176;SOR=0.954 GT:AD:DP:GQ:PL 0/1:34,41:75:99:1176,0,848 chr1 146987910 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 146989527 . A G 1481.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.367;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=10.846;MLEAC=1;MLEAF=0.500;MQ=50.40;MQRankSum=-1.260;QD=23.90;ReadPosRankSum=-2.086;SOR=2.756 GT:AD:DP:GQ:PL 0/1:17,45:62:99:1510,0,378 chr1 146989564 . C T 759.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.430;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=14.982;MLEAC=1;MLEAF=0.500;MQ=51.34;MQRankSum=-4.190;QD=5.80;ReadPosRankSum=-1.066;SOR=2.315 GT:AD:DP:GQ:PL 0/1:99,32:131:99:788,0,3603 chr1 146989666 . T G 1008.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.961;ClippingRankSum=0.000;DP=301;ExcessHet=3.0103;FS=1.737;MLEAC=1;MLEAF=0.500;MQ=53.78;MQRankSum=-5.378;QD=3.35;ReadPosRankSum=-0.434;SOR=0.819 GT:AD:DP:GQ:PL 0/1:239,62:301:99:1037,0,6490 chr1 146989731 . G C 906.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.152;ClippingRankSum=0.000;DP=201;ExcessHet=3.0103;FS=4.342;MLEAC=1;MLEAF=0.500;MQ=49.77;MQRankSum=-2.765;QD=4.51;ReadPosRankSum=0.111;SOR=0.403 GT:AD:DP:GQ:PL 0/1:153,48:201:99:935,0,4593 chr1 146994238 . C G 575.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.928;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=2.741;MLEAC=1;MLEAF=0.500;MQ=53.47;MQRankSum=5.186;QD=19.85;ReadPosRankSum=-0.103;SOR=0.139 GT:AD:DP:GQ:PL 0/1:10,19:29:99:604,0,296 chr1 146994292 . C T 701.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.192;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=2.591;MLEAC=1;MLEAF=0.500;MQ=54.70;MQRankSum=-8.111;QD=9.36;ReadPosRankSum=0.000;SOR=1.193 GT:AD:DP:GQ:PL 0/1:48,27:75:99:730,0,1405 chr1 146994484 . C G 1218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.609;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=13.801;MLEAC=1;MLEAF=0.500;MQ=53.04;MQRankSum=-9.545;QD=10.24;ReadPosRankSum=-1.546;SOR=1.908 GT:AD:DP:GQ:PL 0/1:73,46:119:99:1247,0,2102 chr1 146994509 . C G 817.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=5.359;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=45.655;MLEAC=1;MLEAF=0.500;MQ=52.39;MQRankSum=-8.144;QD=8.52;ReadPosRankSum=-0.476;SOR=5.799 GT:AD:DP:GQ:PL 0/1:67,29:96:99:846,0,1806 chr1 146994600 . T G 1141.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=2.176;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=45.45;MQRankSum=-0.365;QD=33.58;ReadPosRankSum=-0.570;SOR=1.609 GT:AD:DP:GQ:PL 1/1:1,33:34:92:1170,92,0 chr1 146994740 . A C 53.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.25;QD=17.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:81,9,0 chr1 147022951 . C T 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.04;QD=31.43;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr1 147022952 . A G 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.04;QD=29.33;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr1 147024193 . T C 1577.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.93;QD=32.87;SOR=1.562 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1606,144,0 chr1 147024701 . A T 58.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.730;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.52;ReadPosRankSum=-0.828;SOR=0.124 GT:AD:DP:GQ:PL 0/1:10,3:13:87:87,0,347 chr1 147029747 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 147030980 . T C 473.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.345;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.133;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.87;ReadPosRankSum=1.807;SOR=0.460 GT:AD:DP:GQ:PL 0/1:26,22:48:99:502,0,601 chr1 147031062 . G T 1575.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.16;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1604,147,0 chr1 147041249 . A G 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=0.549;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:173,0,256 chr1 147041343 . G A 527.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.832;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.99;ReadPosRankSum=-0.833;SOR=0.672 GT:AD:DP:GQ:PL 0/1:21,23:44:99:556,0,541 chr1 147041583 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 147042882 . A G 442.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.27;MQRankSum=2.017;QD=18.45;ReadPosRankSum=2.882;SOR=0.859 GT:AD:DP:GQ:PL 0/1:11,13:24:99:471,0,371 chr1 147043016 . C T 6138.77 PASS AC=2;AF=1.00;AN=2;DP=205;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.02;QD=29.95;SOR=1.173 GT:AD:DP:GQ:PL 1/1:0,205:205:99:6167,612,0 chr1 147044567 . T C 363.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.992;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=1.710;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.13;ReadPosRankSum=-0.107;SOR=0.333 GT:AD:DP:GQ:PL 0/1:16,14:30:99:392,0,510 chr1 147044638 . G T 259.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.198;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.363;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.55;ReadPosRankSum=0.366;SOR=0.207 GT:AD:DP:GQ:PL 0/1:5,9:14:99:288,0,167 chr1 147051044 . T C 365.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.48;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:36:394,36,0 chr1 147051124 . C T 356.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.34;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:30:385,30,0 chr1 147051160 . T C 488.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.91;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,14:14:42:517,42,0 chr1 147051295 . A G 422.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.621;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=1.485;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.66;ReadPosRankSum=-0.237;SOR=1.035 GT:AD:DP:GQ:PL 0/1:11,16:27:99:451,0,344 chr1 147051483 . A G 370.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.651;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=1.583;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.24;ReadPosRankSum=1.132;SOR=1.368 GT:AD:DP:GQ:PL 0/1:14,14:28:99:399,0,310 chr1 147052108 . T C 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=0.967;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:62:120,0,62 chr1 147056188 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 147056317 . A G 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.524;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:61:69,0,61 chr1 147061176 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 147061410 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.63;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 147077422 . G A 175.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.13;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:204,15,0 chr1 147101568 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 147104585 . C T 369.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.628;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=9.232;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.99;ReadPosRankSum=0.249;SOR=2.553 GT:AD:DP:GQ:PL 0/1:24,13:37:99:398,0,721 chr1 147112438 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 147162354 . G A 988.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.071;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=1.276;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.98;ReadPosRankSum=-0.454;SOR=0.420 GT:AD:DP:GQ:PL 0/1:21,34:55:99:1017,0,561 chr1 147171976 . A G 1192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.379;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=3.584;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.36;ReadPosRankSum=-0.726;SOR=0.431 GT:AD:DP:GQ:PL 0/1:56,49:105:99:1221,0,1449 chr1 147178479 . T C 2972.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.185;ClippingRankSum=0.000;DP=215;ExcessHet=3.0103;FS=1.048;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.83;ReadPosRankSum=-0.372;SOR=0.786 GT:AD:DP:GQ:PL 0/1:104,111:215:99:3001,0,2761 chr1 147203509 . G A 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.35;ReadPosRankSum=-0.253;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:30:145,0,30 chr1 147203510 . G A 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=29.19;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:145,0,30 chr1 147203511 . T A 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=29.19;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:145,0,30 chr1 147242631 . G C 253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.187;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.10;ReadPosRankSum=-0.857;SOR=1.347 GT:AD:DP:GQ:PL 0/1:9,9:18:99:282,0,322 chr1 147242742 . C G 660.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.332;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=6.235;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.68;ReadPosRankSum=0.948;SOR=1.015 GT:AD:DP:GQ:PL 0/1:22,23:45:99:689,0,579 chr1 147242777 . G C 756.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.331;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=2.606;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.10;ReadPosRankSum=-0.811;SOR=0.459 GT:AD:DP:GQ:PL 0/1:18,29:47:99:785,0,542 chr1 147242938 . T C 348.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.980;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.80;ReadPosRankSum=0.332;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,11:16:99:377,0,127 chr1 147252348 . A G 1700.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.529;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=0.596;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.76;ReadPosRankSum=-0.717;SOR=0.607 GT:AD:DP:GQ:PL 0/1:88,70:158:99:1729,0,2483 chr1 147252753 . G A 810.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.147;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=2.298;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.47;ReadPosRankSum=0.181;SOR=1.061 GT:AD:DP:GQ:PL 0/1:37,28:65:99:839,0,980 chr1 147256108 . G A 343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.44;ReadPosRankSum=0.869;SOR=2.147 GT:AD:DP:GQ:PL 0/1:3,10:13:86:372,0,86 chr1 147256494 . A G 504.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.800;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=4.298;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.83;ReadPosRankSum=-1.161;SOR=0.188 GT:AD:DP:GQ:PL 0/1:11,19:30:99:533,0,335 chr1 147265831 . G C 685.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.58;ReadPosRankSum=0.353;SOR=0.743 GT:AD:DP:GQ:PL 0/1:19,20:39:99:714,0,673 chr1 147267409 . T C 278.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.680;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=4.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=-0.894;SOR=1.981 GT:AD:DP:GQ:PL 0/1:12,11:23:99:307,0,319 chr1 147267618 . C T 229.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.215;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.41;ReadPosRankSum=0.103;SOR=0.538 GT:AD:DP:GQ:PL 0/1:20,11:31:99:258,0,572 chr1 147268917 . A G 3760.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.686;ClippingRankSum=0.000;DP=260;ExcessHet=3.0103;FS=2.233;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=2.319;SOR=0.865 GT:AD:DP:GQ:PL 0/1:123,137:260:99:3789,0,3243 chr1 147270690 . T C 179.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.58;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:208,15,0 chr1 147271257 . G T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:56:110,0,56 chr1 147275490 . C T 1373.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.813;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.822;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.02;ReadPosRankSum=0.392;SOR=0.546 GT:AD:DP:GQ:PL 0/1:44,54:98:99:1402,0,1148 chr1 147275569 . T C 1291.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.62;SOR=3.321 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1320,105,0 chr1 147286042 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.65;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 147286246 . G A 2264.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.632;ClippingRankSum=0.000;DP=190;ExcessHet=3.0103;FS=4.546;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.98;ReadPosRankSum=1.037;SOR=1.055 GT:AD:DP:GQ:PL 0/1:107,82:189:99:2293,0,2791 chr1 147287641 . C G 658.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.580;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=1.070;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.80;ReadPosRankSum=0.653;SOR=0.951 GT:AD:DP:GQ:PL 0/1:37,24:61:99:687,0,953 chr1 147287849 . G A 589.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.69;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:618,51,0 chr1 147291302 . A C 1132.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.695;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=2.128;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.73;ReadPosRankSum=0.245;SOR=0.977 GT:AD:DP:GQ:PL 0/1:41,31:72:99:1161,0,2302 chr1 147291303 . G A 1132.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.930;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=2.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.31;ReadPosRankSum=0.808;SOR=1.022 GT:AD:DP:GQ:PL 0/1:43,31:74:99:1161,0,2302 chr1 147293441 . A G 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.72;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 147293770 . C G 657.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.786;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=4.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.78;ReadPosRankSum=-1.313;SOR=2.025 GT:AD:DP:GQ:PL 0/1:16,21:37:99:686,0,421 chr1 147295381 . A G 51.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.034;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.45;ReadPosRankSum=-0.229;SOR=0.784 GT:AD:DP:GQ:PL 0/1:12,3:15:80:80,0,409 chr1 147295672 . G A 232.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.917;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.91;ReadPosRankSum=-1.050;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,8:13:99:261,0,170 chr1 147314858 . C T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 147320011 . G A 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 147320547 . T C 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 147352250 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 147352257 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 147583057 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 147620306 . G A 4065.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.381;ClippingRankSum=0.000;DP=330;ExcessHet=3.0103;FS=0.399;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=2.357;SOR=0.652 GT:AD:DP:GQ:PL 0/1:176,154:330:99:4094,0,4696 chr1 147647471 . G A 1002.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.838;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.764;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.03;ReadPosRankSum=-2.967;SOR=0.828 GT:AD:DP:GQ:PL 0/1:60,40:100:99:1031,0,1615 chr1 147652507 . T G 1917.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.312;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=10.971;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.84;ReadPosRankSum=1.958;SOR=0.280 GT:AD:DP:GQ:PL 0/1:85,77:162:99:1946,0,2348 chr1 147658546 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 147659350 . T C 1651.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.976;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=2.317;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=-1.247;SOR=0.966 GT:AD:DP:GQ:PL 0/1:62,64:126:99:1680,0,1892 chr1 147659386 . A T 1982.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.978;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.58;ReadPosRankSum=0.536;SOR=0.702 GT:AD:DP:GQ:PL 0/1:74,72:146:99:2011,0,2170 chr1 147659830 . T C 584.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.397;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=7.829;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.93;ReadPosRankSum=-0.309;SOR=2.133 GT:AD:DP:GQ:PL 0/1:30,19:49:99:613,0,869 chr1 147704373 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 147891519 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 147908759 . C T 4654.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.894;ClippingRankSum=0.000;DP=317;ExcessHet=3.0103;FS=0.406;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.73;ReadPosRankSum=1.856;SOR=0.666 GT:AD:DP:GQ:PL 0/1:149,167:316:99:4683,0,4241 chr1 147909317 . C A 826.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.653;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=1.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.72;ReadPosRankSum=-0.289;SOR=1.002 GT:AD:DP:GQ:PL 0/1:31,34:65:99:855,0,914 chr1 147968240 . G A 468.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.359;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=1.252;MLEAC=1;MLEAF=0.500;MQ=46.70;MQRankSum=-1.829;QD=11.16;ReadPosRankSum=0.131;SOR=1.022 GT:AD:DP:GQ:PL 0/1:23,19:42:99:497,0,560 chr1 148093790 . C T 555.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.561;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=2.621;MLEAC=1;MLEAF=0.500;MQ=43.13;MQRankSum=0.024;QD=11.58;ReadPosRankSum=-0.102;SOR=0.313 GT:AD:DP:GQ:PL 0/1:24,24:48:99:584,0,631 chr1 148103715 . C G 821.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.671;ClippingRankSum=0.000;DP=204;ExcessHet=3.0103;FS=9.927;MLEAC=1;MLEAF=0.500;MQ=56.33;MQRankSum=-12.291;QD=4.05;ReadPosRankSum=0.642;SOR=0.747 GT:AD:DP:GQ:PL 0/1:153,50:203:99:850,0,4242 chr1 148107533 . C T 527.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.730;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=2.399;MLEAC=1;MLEAF=0.500;MQ=47.56;MQRankSum=-0.905;QD=22.95;ReadPosRankSum=-1.072;SOR=1.802 GT:AD:DP:GQ:PL 0/1:5,18:23:99:556,0,128 chr1 148107606 . C T 592.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.098;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=2.594;MLEAC=1;MLEAF=0.500;MQ=54.37;MQRankSum=-0.317;QD=13.17;ReadPosRankSum=-0.287;SOR=0.346 GT:AD:DP:GQ:PL 0/1:21,24:45:99:621,0,630 chr1 148121976 . G A 1103.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.281;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=3.614;MLEAC=1;MLEAF=0.500;MQ=40.93;MQRankSum=1.824;QD=14.72;ReadPosRankSum=-0.094;SOR=1.207 GT:AD:DP:GQ:PL 0/1:37,38:75:99:1132,0,942 chr1 148124954 . G A 966.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.873;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=2.520;MLEAC=1;MLEAF=0.500;MQ=42.62;MQRankSum=3.591;QD=7.99;ReadPosRankSum=1.106;SOR=0.738 GT:AD:DP:GQ:PL 0/1:82,39:121:99:995,0,2061 chr1 148234291 . A G 74.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.11;MQRankSum=-0.431;QD=7.48;ReadPosRankSum=-0.623;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,4:10:99:103,0,152 chr1 148234420 . G T 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=41.99;MQRankSum=0.524;QD=6.13;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,155 chr1 148379816 . A C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 148417602 . G A 95.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.272;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.18;MQRankSum=-0.022;QD=11.97;ReadPosRankSum=-1.345;SOR=1.329 GT:AD:DP:GQ:PL 0/1:3,5:8:68:124,0,68 chr1 148417618 . G A 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.61;MQRankSum=-0.180;QD=15.11;ReadPosRankSum=-0.566;SOR=1.022 GT:AD:DP:GQ:PL 0/1:3,4:7:70:134,0,70 chr1 148534560 . C T 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.260;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.48;MQRankSum=-1.221;QD=15.08;ReadPosRankSum=-0.674;SOR=1.508 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,111 chr1 148554784 . A C 84.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.03;QD=28.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:112,9,0 chr1 148557104 . C T 65.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.73;QD=21.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:93,9,0 chr1 148977966 . G A 996.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.008;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.89;MQRankSum=-0.203;QD=15.33;ReadPosRankSum=0.526;SOR=0.607 GT:AD:DP:GQ:PL 0/1:26,39:65:99:1025,0,618 chr1 149029906 . G A 2638.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.68;QD=28.87;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2667,189,0 chr1 149029915 . C T 2565.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=45.09;QD=33.86;SOR=1.160 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2594,181,0 chr1 149055583 . C G 472.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.720;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=2.798;MLEAC=1;MLEAF=0.500;MQ=53.12;MQRankSum=-5.522;QD=9.65;ReadPosRankSum=-0.610;SOR=0.340 GT:AD:DP:GQ:PL 0/1:27,22:49:99:501,0,845 chr1 149055595 . A T 546.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.314;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.12;MQRankSum=-6.558;QD=9.11;ReadPosRankSum=0.503;SOR=0.653 GT:AD:DP:GQ:PL 0/1:35,25:60:99:575,0,988 chr1 149055986 . G C 1051.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.537;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=5.530;MLEAC=1;MLEAF=0.500;MQ=55.88;MQRankSum=1.224;QD=18.45;ReadPosRankSum=-0.637;SOR=1.721 GT:AD:DP:GQ:PL 0/1:25,32:57:99:1080,0,739 chr1 149058931 . C A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=41.49;MQRankSum=-0.842;QD=9.95;ReadPosRankSum=-0.524;SOR=2.833 GT:AD:DP:GQ:PL 0/1:2,3:5:35:78,0,35 chr1 149062041 . T C 62.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.047;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.963;MLEAC=1;MLEAF=0.500;MQ=51.06;MQRankSum=-2.956;QD=4.48;ReadPosRankSum=-0.825;SOR=1.981 GT:AD:DP:GQ:PL 0/1:10,4:14:91:91,0,342 chr1 149070888 . C T 1025.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.225;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=5.946;MLEAC=1;MLEAF=0.500;MQ=48.28;MQRankSum=-5.806;QD=15.08;ReadPosRankSum=-0.194;SOR=1.581 GT:AD:DP:GQ:PL 0/1:29,39:68:99:1054,0,745 chr1 149071401 . T C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.38;MQRankSum=-2.515;QD=5.53;ReadPosRankSum=-0.480;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:78:78,0,224 chr1 149073130 . C T 402.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.69;QD=33.56;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:431,36,0 chr1 149073894 . C T 394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.22;MQRankSum=-0.510;QD=15.18;ReadPosRankSum=-0.031;SOR=1.071 GT:AD:DP:GQ:PL 0/1:14,12:26:99:423,0,496 chr1 149075700 . G C 254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.864;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=4.062;MLEAC=1;MLEAF=0.500;MQ=50.96;MQRankSum=-5.582;QD=2.47;ReadPosRankSum=2.628;SOR=1.318 GT:AD:DP:GQ:PL 0/1:89,14:103:99:283,0,2436 chr1 149079370 . G C 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.335;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.58;MQRankSum=-1.030;QD=17.25;ReadPosRankSum=-0.852;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:218,0,132 chr1 149080037 . C T 173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.747;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=9.061;MLEAC=1;MLEAF=0.500;MQ=45.32;MQRankSum=-4.386;QD=2.41;ReadPosRankSum=0.456;SOR=1.516 GT:AD:DP:GQ:PL 0/1:59,13:72:99:202,0,1574 chr1 149082016 . A T 504.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.785;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=2.699;MLEAC=1;MLEAF=0.500;MQ=43.57;MQRankSum=-1.449;QD=12.62;ReadPosRankSum=-0.134;SOR=0.368 GT:AD:DP:GQ:PL 0/1:18,22:40:99:533,0,427 chr1 149100651 . C T 33.79 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.44;MQRankSum=0.000;QD=11.26;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:23:62,0,23 chr1 149113796 . C T 189.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.68;QD=31.64;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:218,18,0 chr1 149175887 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.86;MQRankSum=-0.674;QD=10.94;ReadPosRankSum=1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 149198315 . G A 1008.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.908;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=4.536;MLEAC=1;MLEAF=0.500;MQ=58.13;MQRankSum=0.578;QD=13.27;ReadPosRankSum=-0.245;SOR=1.275 GT:AD:DP:GQ:PL 0/1:41,35:76:99:1037,0,1099 chr1 149607337 . A G 141.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.26;QD=23.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:170,18,0 chr1 149813197 . C T 1410.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.737;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.97;MQRankSum=0.707;QD=16.03;ReadPosRankSum=-0.865;SOR=0.598 GT:AD:DP:GQ:PL 0/1:38,50:88:99:1439,0,1082 chr1 149887025 . G A 5773.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.144;ClippingRankSum=0.000;DP=553;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.44;ReadPosRankSum=-1.862;SOR=0.688 GT:AD:DP:GQ:PL 0/1:318,235:553:99:5802,0,8473 chr1 149909621 . A C 4932.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.357;ClippingRankSum=0.000;DP=243;ExcessHet=3.0103;FS=1.565;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.38;ReadPosRankSum=-0.165;SOR=0.570 GT:AD:DP:GQ:PL 0/1:111,131:242:99:4961,0,5625 chr1 149909631 . C T 4682.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.664;ClippingRankSum=0.000;DP=226;ExcessHet=3.0103;FS=2.279;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.81;ReadPosRankSum=-0.460;SOR=0.549 GT:AD:DP:GQ:PL 0/1:105,120:225:99:4711,0,5496 chr1 149933386 . G A 2107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.178;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.33;ReadPosRankSum=-1.344;SOR=0.655 GT:AD:DP:GQ:PL 0/1:94,77:171:99:2136,0,2743 chr1 149936215 . A G 1984.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.466;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=2.845;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.40;ReadPosRankSum=0.491;SOR=0.503 GT:AD:DP:GQ:PL 0/1:89,71:160:99:2013,0,2213 chr1 149959622 . G A 975.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.188;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.37;ReadPosRankSum=1.818;SOR=0.746 GT:AD:DP:GQ:PL 0/1:38,35:73:99:1004,0,1092 chr1 150072671 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 150082937 . G A 442.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.767;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=5.997;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.02;ReadPosRankSum=0.653;SOR=2.494 GT:AD:DP:GQ:PL 0/1:20,14:34:99:471,0,631 chr1 150158640 . A G 173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.904;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=0.397;SOR=0.340 GT:AD:DP:GQ:PL 0/1:10,6:16:99:202,0,356 chr1 150214807 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 150226791 . G T 738.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.139;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=4.590;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.18;ReadPosRankSum=-0.995;SOR=0.252 GT:AD:DP:GQ:PL 0/1:16,27:43:99:767,0,395 chr1 150227079 . A C 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-0.842;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 150229768 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 150229793 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 150230838 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 150232103 . C G 62.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.22;QD=20.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:90,9,0 chr1 150247127 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 150261883 . T G 221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.384;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=5.305;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.92;ReadPosRankSum=-0.574;SOR=2.080 GT:AD:DP:GQ:PL 0/1:20,8:28:99:250,0,683 chr1 150268830 . G T 3038.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.098;ClippingRankSum=0.000;DP=225;ExcessHet=3.0103;FS=4.477;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.69;ReadPosRankSum=-0.700;SOR=1.067 GT:AD:DP:GQ:PL 0/1:111,111:222:99:3067,0,3300 chr1 150273149 . A G 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-0.921;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr1 150274283 . C T 564.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.964;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=12.481;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.48;ReadPosRankSum=0.607;SOR=3.611 GT:AD:DP:GQ:PL 0/1:22,17:39:99:593,0,644 chr1 150276693 . C A 977.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.289;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=1.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.03;ReadPosRankSum=-0.786;SOR=1.152 GT:AD:DP:GQ:PL 0/1:28,33:61:99:1006,0,816 chr1 150279918 . G A 660.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.868;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.86;ReadPosRankSum=-0.768;SOR=0.859 GT:AD:DP:GQ:PL 0/1:17,20:37:99:689,0,598 chr1 150280573 . T G 170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.258;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.20;ReadPosRankSum=-0.077;SOR=0.693 GT:AD:DP:GQ:PL 0/1:7,7:14:99:199,0,204 chr1 150283177 . T C 119.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.96;ReadPosRankSum=0.084;SOR=0.368 GT:AD:DP:GQ:PL 0/1:2,4:6:65:148,0,65 chr1 150283876 . G C 1126.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.610;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=4.368;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.74;ReadPosRankSum=1.767;SOR=1.267 GT:AD:DP:GQ:PL 0/1:40,42:82:99:1155,0,969 chr1 150286426 . C G 1497.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.529;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=4.008;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.14;ReadPosRankSum=2.202;SOR=0.377 GT:AD:DP:GQ:PL 0/1:58,56:114:99:1526,0,1909 chr1 150286988 . A C 1568.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.101;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=2.848;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=0.671;SOR=0.443 GT:AD:DP:GQ:PL 0/1:67,57:124:99:1597,0,1929 chr1 150304001 . G A 730.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.201;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=1.721;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.14;ReadPosRankSum=0.146;SOR=1.255 GT:AD:DP:GQ:PL 0/1:10,23:33:99:759,0,204 chr1 150304033 . G A 645.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.321;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=11.897;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.92;ReadPosRankSum=0.506;SOR=3.716 GT:AD:DP:GQ:PL 0/1:8,19:27:99:674,0,151 chr1 150304957 . T C 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=1.180;SOR=1.022 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,189 chr1 150308112 . T C 4663.77 PASS AC=2;AF=1.00;AN=2;DP=146;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.84;QD=31.94;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,146:146:99:4692,438,0 chr1 150308367 . G C 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.765;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.86;ReadPosRankSum=-1.103;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:108,0,182 chr1 150308767 . A C 327.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.047;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.25;ReadPosRankSum=0.299;SOR=0.610 GT:AD:DP:GQ:PL 0/1:12,11:23:99:356,0,398 chr1 150309065 . A C 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=0.272;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr1 150312090 . A G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 150328268 . C T 1150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.126;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.828;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.24;ReadPosRankSum=-0.319;SOR=0.803 GT:AD:DP:GQ:PL 0/1:50,44:94:99:1179,0,1419 chr1 150331680 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 150333392 . A C 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=1.248;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,259 chr1 150334799 . G T 410.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.330;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.86;ReadPosRankSum=0.040;SOR=0.990 GT:AD:DP:GQ:PL 0/1:10,13:23:99:439,0,314 chr1 150338498 . A T 157.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.58;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:186,15,0 chr1 150340073 . G A 502.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.241;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=-1.113;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,18:28:99:531,0,299 chr1 150349010 . G A 183.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.150;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.21;ReadPosRankSum=0.455;SOR=0.473 GT:AD:DP:GQ:PL 0/1:10,8:18:99:212,0,283 chr1 150379885 . T A 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=-0.674;SOR=0.991 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,73 chr1 150432701 . C G 31.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0 chr1 150432822 . T C 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 150446063 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:59:72,0,59 chr1 150460326 . G A 656.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.600;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.39;ReadPosRankSum=-0.181;SOR=0.716 GT:AD:DP:GQ:PL 0/1:31,22:53:99:685,0,931 chr1 150473343 . A G 1497.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.648;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=1.634;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.37;ReadPosRankSum=-1.522;SOR=0.927 GT:AD:DP:GQ:PL 0/1:58,54:112:99:1526,0,1490 chr1 150482409 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 150486835 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 150487692 . A G 549.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.113;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.71;ReadPosRankSum=0.728;SOR=0.793 GT:AD:DP:GQ:PL 0/1:17,18:35:99:578,0,532 chr1 150492127 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 150494892 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 150494894 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 150494917 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 150497004 . C T 1249.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.338;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.58;ReadPosRankSum=0.067;SOR=0.684 GT:AD:DP:GQ:PL 0/1:49,43:92:99:1278,0,1506 chr1 150497846 . C A 618.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.362;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.17;ReadPosRankSum=-0.025;SOR=0.846 GT:AD:DP:GQ:PL 0/1:27,20:47:99:647,0,906 chr1 150504585 . C T 2245.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.925;ClippingRankSum=0.000;DP=155;ExcessHet=3.0103;FS=1.274;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.49;ReadPosRankSum=-1.830;SOR=0.849 GT:AD:DP:GQ:PL 0/1:80,75:155:99:2274,0,2596 chr1 150507425 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 150507501 . A G 50.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:78,9,0 chr1 150507897 . G T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 150510262 . G A 967.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.427;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.877;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.00;ReadPosRankSum=-0.540;SOR=0.558 GT:AD:DP:GQ:PL 0/1:51,37:88:99:996,0,1343 chr1 150510760 . A C 336.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.165;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.05;ReadPosRankSum=-0.350;SOR=0.610 GT:AD:DP:GQ:PL 0/1:5,11:16:99:365,0,161 chr1 150510879 . C T 1815.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.500;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=1.593;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.41;ReadPosRankSum=-0.941;SOR=0.894 GT:AD:DP:GQ:PL 0/1:64,62:126:99:1844,0,1682 chr1 150511364 . C T 2533.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.132;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=2.196;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.36;ReadPosRankSum=0.014;SOR=0.908 GT:AD:DP:GQ:PL 0/1:59,79:138:99:2562,0,1808 chr1 150512079 . C G 188.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.335;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.16;ReadPosRankSum=-1.383;SOR=0.941 GT:AD:DP:GQ:PL 0/1:5,6:11:99:217,0,142 chr1 150512511 . G A 4041.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.493;ClippingRankSum=0.000;DP=329;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.29;ReadPosRankSum=0.371;SOR=0.709 GT:AD:DP:GQ:PL 0/1:171,158:329:99:4070,0,4514 chr1 150513055 . T C 396.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.23;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:33:425,33,0 chr1 150513090 . T G 172.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.683;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.187;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.52;ReadPosRankSum=0.669;SOR=1.371 GT:AD:DP:GQ:PL 0/1:9,6:15:99:201,0,263 chr1 150513095 . T C 586.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.96;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,16:16:48:615,48,0 chr1 150538184 . C T 252.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.28;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:30:281,30,0 chr1 150549766 . T C 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.253;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:65:76,0,65 chr1 150553568 . G C 4861.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.049;ClippingRankSum=0.000;DP=356;ExcessHet=3.0103;FS=1.250;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.73;ReadPosRankSum=-0.301;SOR=0.698 GT:AD:DP:GQ:PL 0/1:178,176:354:99:4890,0,4958 chr1 150553917 . G A 3078.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.434;ClippingRankSum=0.000;DP=253;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.22;ReadPosRankSum=-0.055;SOR=0.686 GT:AD:DP:GQ:PL 0/1:131,121:252:99:3107,0,3832 chr1 150553930 . C T 2934.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.298;ClippingRankSum=0.000;DP=231;ExcessHet=3.0103;FS=1.040;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=0.176;SOR=0.801 GT:AD:DP:GQ:PL 0/1:119,111:230:99:2963,0,3444 chr1 150554816 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 150555732 . C T 844.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.009;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.61;ReadPosRankSum=0.493;SOR=0.719 GT:AD:DP:GQ:PL 0/1:42,25:67:99:873,0,1634 chr1 150558532 . T C 8020.77 PASS AC=2;AF=1.00;AN=2;DP=250;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.08;SOR=1.367 GT:AD:DP:GQ:PL 1/1:0,250:250:99:8049,749,0 chr1 150558574 . G A 3946.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.388;ClippingRankSum=0.000;DP=286;ExcessHet=3.0103;FS=0.902;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.80;ReadPosRankSum=0.333;SOR=0.625 GT:AD:DP:GQ:PL 0/1:137,149:286:99:3975,0,3626 chr1 150558694 . C T 8048.77 PASS AC=2;AF=1.00;AN=2;DP=240;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.54;SOR=1.150 GT:AD:DP:GQ:PL 1/1:0,240:240:99:8077,719,0 chr1 150558884 . G A 953.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.085;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=2.003;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.63;ReadPosRankSum=-0.884;SOR=0.449 GT:AD:DP:GQ:PL 0/1:39,31:70:99:982,0,1213 chr1 150558904 . T C 1272.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.229;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=1.953;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.20;ReadPosRankSum=0.672;SOR=0.693 GT:AD:DP:GQ:PL 0/1:31,43:74:99:1301,0,944 chr1 150561424 . G A 518.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.691;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.81;ReadPosRankSum=0.382;SOR=0.931 GT:AD:DP:GQ:PL 0/1:29,19:48:99:547,0,859 chr1 150579566 . G A 1674.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.129;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=1.486;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.22;ReadPosRankSum=1.006;SOR=0.538 GT:AD:DP:GQ:PL 0/1:71,66:137:99:1703,0,1894 chr1 150627705 . C T 459.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.128;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=1.909;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.68;ReadPosRankSum=0.968;SOR=1.402 GT:AD:DP:GQ:PL 0/1:10,16:26:99:488,0,237 chr1 150629037 . C T 838.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.275;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=3.157;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.62;ReadPosRankSum=0.429;SOR=1.162 GT:AD:DP:GQ:PL 0/1:45,34:79:99:867,0,1167 chr1 150648093 . C G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 150658581 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 150663266 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 150663298 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 150663335 . C T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.000;SOR=0.859 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr1 150687216 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 150687219 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 150688226 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 150694321 . G A 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=1.068;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:61:188,0,61 chr1 150698968 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 150706434 . T C 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=-2.024;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:173,0,256 chr1 150706557 . G A 219.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.671;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.99;ReadPosRankSum=-0.845;SOR=0.827 GT:AD:DP:GQ:PL 0/1:30,14:44:99:248,0,814 chr1 150706882 . C T 1077.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.873;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.888;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.76;ReadPosRankSum=-0.583;SOR=0.836 GT:AD:DP:GQ:PL 0/1:30,43:73:99:1106,0,829 chr1 150708512 . A T 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.29;ReadPosRankSum=-1.368;SOR=0.859 GT:AD:DP:GQ:PL 0/1:6,7:13:99:253,0,211 chr1 150714157 . A T 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.655;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=5.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.91;ReadPosRankSum=-0.654;SOR=0.674 GT:AD:DP:GQ:PL 0/1:8,5:13:99:170,0,227 chr1 150726205 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 150733279 . G A 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.91;ReadPosRankSum=-0.048;SOR=0.307 GT:AD:DP:GQ:PL 0/1:9,5:14:99:167,0,334 chr1 150754853 . C T 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-0.180;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 150755063 . G A 1738.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.753;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=2.277;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.58;ReadPosRankSum=0.634;SOR=0.949 GT:AD:DP:GQ:PL 0/1:62,66:128:99:1767,0,1593 chr1 150757708 . C A 629.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.255;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=0.819;SOR=1.214 GT:AD:DP:GQ:PL 0/1:26,19:45:99:658,0,914 chr1 150757803 . A G 1464.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.278;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.53;ReadPosRankSum=-1.864;SOR=0.714 GT:AD:DP:GQ:PL 0/1:74,53:127:99:1493,0,2097 chr1 150799227 . T C 2189.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.84;SOR=1.451 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2218,213,0 chr1 150807048 . T A 100.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:128,9,0 chr1 150807279 . C T 3665.77 PASS AC=2;AF=1.00;AN=2;DP=127;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.86;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3694,381,0 chr1 150817485 . A T 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.660;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.392;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.04;ReadPosRankSum=0.655;SOR=0.141 GT:AD:DP:GQ:PL 0/1:9,9:18:99:173,0,287 chr1 150828990 . T C 1570.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.68;SOR=2.885 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1599,132,0 chr1 150831953 . A C 508.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.495;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=3.353;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.96;ReadPosRankSum=0.470;SOR=1.398 GT:AD:DP:GQ:PL 0/1:15,19:34:99:537,0,387 chr1 150836413 . C G 1091.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.362;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.14;ReadPosRankSum=0.923;SOR=0.737 GT:AD:DP:GQ:PL 0/1:56,42:98:99:1120,0,1449 chr1 150839236 . T C 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.86;ReadPosRankSum=-0.120;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:180,0,139 chr1 150839318 . T C 1025.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.666;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=7.817;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.65;ReadPosRankSum=1.551;SOR=2.535 GT:AD:DP:GQ:PL 0/1:25,30:55:99:1054,0,730 chr1 150853035 . C T 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-0.524;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 150853154 . G A 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.13;ReadPosRankSum=0.967;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:137,0,65 chr1 150878022 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 150940658 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.38;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 150940666 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.73;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 150944181 . C T 398.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.85;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:427,33,0 chr1 150947366 . C T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 150951298 . T A 1701.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.78;SOR=1.298 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1730,144,0 chr1 150958986 . G A 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.69;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 150963396 . A G 3591.77 PASS AC=2;AF=1.00;AN=2;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.86;SOR=1.779 GT:AD:DP:GQ:PL 1/1:0,101:101:99:3620,303,0 chr1 150966095 . G A 1414.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.90;SOR=1.954 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1443,129,0 chr1 150966140 . G A 1955.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.54;SOR=1.430 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1984,186,0 chr1 150967268 . C A 4070.77 PASS AC=2;AF=1.00;AN=2;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.79;SOR=1.208 GT:AD:DP:GQ:PL 1/1:0,117:117:99:4099,351,0 chr1 150967881 . G T 1366.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.53;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1395,93,0 chr1 150967882 . C T 1366.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.68;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1395,93,0 chr1 150968905 . C T 3527.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.62;SOR=4.059 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3556,277,0 chr1 150972065 . A G 1999.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.29;SOR=4.534 GT:AD:DP:GQ:PL 1/1:0,51:51:99:2028,153,0 chr1 150972231 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 150974014 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 150983652 . G A 1665.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.00;SOR=5.186 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1694,123,0 chr1 150986501 . T C 8660.77 PASS AC=2;AF=1.00;AN=2;DP=249;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.78;SOR=0.932 GT:AD:DP:GQ:PL 1/1:0,249:249:99:8689,747,0 chr1 150987874 . A C 4382.77 PASS AC=2;AF=1.00;AN=2;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.31;SOR=1.678 GT:AD:DP:GQ:PL 1/1:0,140:140:99:4411,420,0 chr1 150987927 . C A 2338.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.623;ClippingRankSum=0.000;DP=224;ExcessHet=3.0103;FS=7.582;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.44;ReadPosRankSum=0.812;SOR=1.138 GT:AD:DP:GQ:PL 0/1:130,94:224:99:2367,0,3454 chr1 150997091 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 150997516 . T C 8334.77 PASS AC=2;AF=1.00;AN=2;DP=250;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.34;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,250:250:99:8363,750,0 chr1 150998101 . G T 6693.77 PASS AC=2;AF=1.00;AN=2;DP=200;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.64;SOR=1.646 GT:AD:DP:GQ:PL 1/1:0,199:199:99:6722,596,0 chr1 151000062 . G A 1836.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.76;SOR=3.352 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1865,144,0 chr1 151001038 . G A 1019.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.69;SOR=3.180 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1048,81,0 chr1 151001686 . G A 5551.77 PASS AC=2;AF=1.00;AN=2;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=1.185 GT:AD:DP:GQ:PL 1/1:0,171:171:99:5580,513,0 chr1 151001835 . G A 1692.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.383;ClippingRankSum=0.000;DP=174;ExcessHet=3.0103;FS=1.977;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.78;ReadPosRankSum=0.251;SOR=0.874 GT:AD:DP:GQ:PL 0/1:104,69:173:99:1721,0,2834 chr1 151002632 . T C 8464.77 PASS AC=2;AF=1.00;AN=2;DP=252;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.59;SOR=0.709 GT:AD:DP:GQ:PL 1/1:0,252:252:99:8493,756,0 chr1 151009144 . C T 516.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.57;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:545,42,0 chr1 151018349 . A G 843.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.74;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,22:22:66:872,66,0 chr1 151018809 . A G 1205.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.28;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1234,90,0 chr1 151018854 . A C 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.67;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr1 151025464 . T C 598.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.47;SOR=2.712 GT:AD:DP:GQ:PL 1/1:0,17:17:51:627,51,0 chr1 151027387 . A G 2879.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.207;ClippingRankSum=0.000;DP=193;ExcessHet=3.0103;FS=1.153;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.92;ReadPosRankSum=0.377;SOR=0.576 GT:AD:DP:GQ:PL 0/1:85,108:193:99:2908,0,2389 chr1 151029107 . G A 2089.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.90;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2118,173,0 chr1 151034063 . C A 11875.77 PASS AC=2;AF=1.00;AN=2;DP=380;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.42;SOR=0.781 GT:AD:DP:GQ:PL 1/1:0,378:378:99:11904,1133,0 chr1 151046385 . A G 942.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.92;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,27:27:83:971,83,0 chr1 151046704 . A G 2074.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.42;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2103,192,0 chr1 151054339 . C T 3006.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,94:94:99:3035,282,0 chr1 151055758 . G T 5347.77 PASS AC=2;AF=1.00;AN=2;DP=160;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.42;SOR=2.393 GT:AD:DP:GQ:PL 1/1:0,160:160:99:5376,479,0 chr1 151067133 . A G 2894.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.72;SOR=3.528 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2923,236,0 chr1 151094877 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 151106841 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 151125240 . G C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 151131579 . C T 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 151132122 . A G 704.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.95;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:733,54,0 chr1 151132474 . G A 2497.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.40;SOR=1.066 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2526,201,0 chr1 151133053 . C T 454.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.367;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.49;ReadPosRankSum=-0.182;SOR=0.619 GT:AD:DP:GQ:PL 0/1:9,17:26:99:483,0,264 chr1 151133348 . C G 1025.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.06;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1054,96,0 chr1 151135661 . T G 15730.77 PASS AC=2;AF=1.00;AN=2;DP=480;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.77;SOR=1.095 GT:AD:DP:GQ:PL 1/1:0,480:480:99:15759,1439,0 chr1 151137165 . G A 438.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.72;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,12:12:36:467,36,0 chr1 151137261 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 151142710 . C T 947.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.25;SOR=3.528 GT:AD:DP:GQ:PL 1/1:0,25:25:75:976,75,0 chr1 151151206 . G T 45.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:73,6,0 chr1 151173710 . C G 4216.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.01;SOR=1.850 GT:AD:DP:GQ:PL 1/1:0,124:124:99:4245,372,0 chr1 151173800 . T C 1158.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.82;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1187,90,0 chr1 151177125 . A G 1188.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.07;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1217,90,0 chr1 151184226 . C T 272.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.693;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=3.010;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.05;ReadPosRankSum=-0.187;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,10:16:99:301,0,178 chr1 151199335 . C G 1585.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.25;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1614,120,0 chr1 151232156 . C G 1170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.653;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.20;ReadPosRankSum=-1.094;SOR=0.875 GT:AD:DP:GQ:PL 0/1:40,37:77:99:1199,0,1277 chr1 151232827 . A G 1677.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.81;SOR=3.865 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1706,135,0 chr1 151232873 . A G 542.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.59;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:571,42,0 chr1 151236587 . C T 6042.77 PASS AC=2;AF=1.00;AN=2;DP=189;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.76;QD=32.14;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,188:188:99:6071,564,0 chr1 151238313 . C T 3160.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.82;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,106:106:99:3189,318,0 chr1 151242535 . A G 1307.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.045;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=0.732;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.57;ReadPosRankSum=0.012;SOR=0.784 GT:AD:DP:GQ:PL 0/1:53,51:104:99:1336,0,1310 chr1 151242691 . T C 645.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.085;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.74;ReadPosRankSum=0.770;SOR=0.646 GT:AD:DP:GQ:PL 0/1:30,25:55:99:674,0,917 chr1 151253706 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 151254895 . A G 564.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.33;SOR=2.448 GT:AD:DP:GQ:PL 1/1:0,15:15:45:593,45,0 chr1 151265746 . G A 3342.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.44;SOR=4.431 GT:AD:DP:GQ:PL 1/1:0,89:89:99:3371,267,0 chr1 151266575 . T C 9265.77 PASS AC=2;AF=1.00;AN=2;DP=279;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.21;SOR=1.106 GT:AD:DP:GQ:PL 1/1:0,279:279:99:9294,837,0 chr1 151267094 . C T 5337.77 PASS AC=2;AF=1.00;AN=2;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.44;SOR=1.364 GT:AD:DP:GQ:PL 1/1:0,155:155:99:5366,465,0 chr1 151267532 . A G 196.79 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.60;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:23:225,23,0 chr1 151268066 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 151281565 . T C 3013.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.37;SOR=3.153 GT:AD:DP:GQ:PL 1/1:0,84:84:99:3042,252,0 chr1 151288239 . G A 3580.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.608;ClippingRankSum=0.000;DP=261;ExcessHet=3.0103;FS=0.453;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.83;ReadPosRankSum=1.225;SOR=0.747 GT:AD:DP:GQ:PL 0/1:133,126:259:99:3609,0,3809 chr1 151291306 . A G 2373.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.10;SOR=2.939 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2402,198,0 chr1 151294593 . G A 3847.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.668;ClippingRankSum=0.000;DP=274;ExcessHet=3.0103;FS=2.014;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=-1.875;SOR=0.821 GT:AD:DP:GQ:PL 0/1:132,141:273:99:3876,0,3349 chr1 151299306 . A C 1434.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.19;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1463,138,0 chr1 151299975 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 151304783 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 151306029 . A G 2684.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.56;SOR=1.923 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2713,240,0 chr1 151307447 . T A 846.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.478;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.45;ReadPosRankSum=0.651;SOR=0.693 GT:AD:DP:GQ:PL 0/1:34,34:68:99:875,0,950 chr1 151307924 . C G 3503.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.51;SOR=2.454 GT:AD:DP:GQ:PL 1/1:0,96:96:99:3532,289,0 chr1 151310543 . T C 744.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.27;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,20:20:60:773,60,0 chr1 151315696 . G A 8771.77 PASS AC=2;AF=1.00;AN=2;DP=262;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.61;SOR=1.140 GT:AD:DP:GQ:PL 1/1:0,261:261:99:8800,783,0 chr1 151341903 . T C 1220.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.22;SOR=5.486 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1249,93,0 chr1 151343685 . G A 8652.77 PASS AC=2;AF=1.00;AN=2;DP=264;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.78;SOR=1.209 GT:AD:DP:GQ:PL 1/1:0,264:264:99:8681,792,0 chr1 151351939 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 151355237 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 151360465 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 151361402 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 151365312 . A G 4930.77 PASS AC=2;AF=1.00;AN=2;DP=150;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.87;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,150:150:99:4959,450,0 chr1 151366094 . G A 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr1 151399571 . C T 1389.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.551;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.58;ReadPosRankSum=-1.177;SOR=0.636 GT:AD:DP:GQ:PL 0/1:62,58:120:99:1418,0,1616 chr1 151399662 . G A 1245.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.391;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=1.654;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.09;ReadPosRankSum=-0.153;SOR=0.941 GT:AD:DP:GQ:PL 0/1:57,46:103:99:1274,0,1526 chr1 151400294 . A G 4459.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.46;SOR=1.792 GT:AD:DP:GQ:PL 1/1:0,121:121:99:4488,363,0 chr1 151400724 . T C 4113.77 PASS AC=2;AF=1.00;AN=2;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.57;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,119:119:99:4142,357,0 chr1 151402069 . C T 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr1 151404772 . T C 2142.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.50;SOR=2.041 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2171,177,0 chr1 151404931 . A C 3584.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.397;ClippingRankSum=0.000;DP=324;ExcessHet=3.0103;FS=6.653;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.06;ReadPosRankSum=-2.339;SOR=1.017 GT:AD:DP:GQ:PL 0/1:184,140:324:99:3613,0,4989 chr1 151406774 . G A 385.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.260;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=3.032;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.30;ReadPosRankSum=1.067;SOR=1.938 GT:AD:DP:GQ:PL 0/1:17,12:29:99:414,0,589 chr1 151412235 . A G 2434.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.46;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2463,225,0 chr1 151412257 . G A 2753.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.61;SOR=1.240 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2782,279,0 chr1 151412581 . G A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 151423306 . T C 1044.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.467;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.77;ReadPosRankSum=-1.919;SOR=0.484 GT:AD:DP:GQ:PL 0/1:18,30:48:99:1073,0,583 chr1 151423561 . A C 1840.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.149;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=3.324;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.64;ReadPosRankSum=-1.260;SOR=0.458 GT:AD:DP:GQ:PL 0/1:63,72:135:99:1869,0,1690 chr1 151428466 . A C 859.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.517;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=6.042;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.63;ReadPosRankSum=-1.420;SOR=1.572 GT:AD:DP:GQ:PL 0/1:24,31:55:99:888,0,677 chr1 151428569 . G A 367.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.452;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.52;ReadPosRankSum=1.089;SOR=1.911 GT:AD:DP:GQ:PL 0/1:4,11:15:99:396,0,122 chr1 151429569 . A G 3819.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.73;SOR=2.573 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3848,331,0 chr1 151451653 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 151511203 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 151511314 . G A 261.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.72;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:290,24,0 chr1 151511378 . A G 657.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.27;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,16:16:48:686,48,0 chr1 151511416 . G A 681.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.25;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:51:710,51,0 chr1 151523320 . T C 1834.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.438;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=2.309;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.11;ReadPosRankSum=-0.063;SOR=0.441 GT:AD:DP:GQ:PL 0/1:35,61:96:99:1863,0,1036 chr1 151524664 . T C 1408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.596;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=8.223;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.45;ReadPosRankSum=-0.478;SOR=1.231 GT:AD:DP:GQ:PL 0/1:68,55:123:99:1437,0,1794 chr1 151524900 . G A 266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.237;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.05;ReadPosRankSum=-0.177;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,10:14:91:295,0,91 chr1 151527159 . C T 1615.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.996;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=2.144;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.69;ReadPosRankSum=0.116;SOR=0.406 GT:AD:DP:GQ:PL 0/1:46,57:103:99:1644,0,1337 chr1 151527255 . G A 266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.52;ReadPosRankSum=-0.150;SOR=1.179 GT:AD:DP:GQ:PL 0/1:5,8:13:99:295,0,169 chr1 151529222 . A G 2695.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=1.845 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2724,252,0 chr1 151529261 . T C 3511.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.13;SOR=1.677 GT:AD:DP:GQ:PL 1/1:0,106:106:99:3540,318,0 chr1 151530869 . G A 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.792;SOR=0.086 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 151532214 . G A 483.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.268;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.92;ReadPosRankSum=-0.676;SOR=0.941 GT:AD:DP:GQ:PL 0/1:12,15:27:99:512,0,388 chr1 151532302 . C T 856.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.208;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=1.016;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.07;ReadPosRankSum=-1.475;SOR=0.980 GT:AD:DP:GQ:PL 0/1:39,32:71:99:885,0,1150 chr1 151535585 . A C 1159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.129;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.18;ReadPosRankSum=-0.970;SOR=0.575 GT:AD:DP:GQ:PL 0/1:50,38:88:99:1188,0,1654 chr1 151537550 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 151557442 . C T 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.86;ReadPosRankSum=0.480;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:99:180,0,99 chr1 151557783 . T C 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-0.842;SOR=2.494 GT:AD:DP:GQ:PL 0/1:3,4:7:70:146,0,70 chr1 151561666 . A C 1867.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.286;ClippingRankSum=0.000;DP=167;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.18;ReadPosRankSum=-0.078;SOR=0.706 GT:AD:DP:GQ:PL 0/1:93,74:167:99:1896,0,2451 chr1 151562040 . C A 1625.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.462;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=1.894;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.08;ReadPosRankSum=0.307;SOR=0.764 GT:AD:DP:GQ:PL 0/1:109,70:179:99:1654,0,2738 chr1 151564500 . C G 2635.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.220;ClippingRankSum=0.000;DP=209;ExcessHet=3.0103;FS=1.724;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.61;ReadPosRankSum=-0.655;SOR=0.836 GT:AD:DP:GQ:PL 0/1:109,100:209:99:2664,0,2978 chr1 151569623 . G T 10924.77 PASS AC=2;AF=1.00;AN=2;DP=332;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=1.235 GT:AD:DP:GQ:PL 1/1:0,331:331:99:10953,993,0 chr1 151570150 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 151574455 . A G 2254.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.77;SOR=3.187 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2283,186,0 chr1 151578602 . A G 1396.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.49;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1425,108,0 chr1 151578844 . G A 8859.77 PASS AC=2;AF=1.00;AN=2;DP=276;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.10;SOR=0.951 GT:AD:DP:GQ:PL 1/1:0,276:276:99:8888,828,0 chr1 151581442 . C T 1433.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.17;SOR=4.351 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1462,111,0 chr1 151582027 . T C 11252.77 PASS AC=2;AF=1.00;AN=2;DP=336;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.49;SOR=1.711 GT:AD:DP:GQ:PL 1/1:0,336:336:99:11281,1009,0 chr1 151590593 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 151632411 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 151662327 . G A 513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.299;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=6.232;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.27;ReadPosRankSum=-0.531;SOR=2.726 GT:AD:DP:GQ:PL 0/1:20,16:36:99:542,0,659 chr1 151692402 . C T 361.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.876;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=5.583;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.82;ReadPosRankSum=-0.260;SOR=1.773 GT:AD:DP:GQ:PL 0/1:26,15:41:99:390,0,737 chr1 151697521 . C A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:37:71,0,37 chr1 151703142 . T C 3708.77 PASS AC=2;AF=1.00;AN=2;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.53;SOR=1.469 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3737,342,0 chr1 151706965 . T C 599.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.753;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=2.861;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=-1.206;SOR=1.302 GT:AD:DP:GQ:PL 0/1:18,22:40:99:628,0,529 chr1 151707424 . C T 1040.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.018;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.092;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.35;ReadPosRankSum=-0.314;SOR=0.538 GT:AD:DP:GQ:PL 0/1:21,39:60:99:1069,0,511 chr1 151707487 . C T 1884.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.882;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=2.516;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.25;ReadPosRankSum=-1.468;SOR=1.002 GT:AD:DP:GQ:PL 0/1:49,67:116:99:1913,0,1167 chr1 151709159 . T C 1412.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.875;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=4.351;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.781;SOR=1.201 GT:AD:DP:GQ:PL 0/1:35,49:84:99:1441,0,1071 chr1 151714507 . T A 4963.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.564;ClippingRankSum=0.000;DP=325;ExcessHet=3.0103;FS=3.007;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.37;ReadPosRankSum=-0.104;SOR=0.541 GT:AD:DP:GQ:PL 0/1:140,183:323:99:4992,0,3622 chr1 151727738 . T C 810.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.615;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=11.408;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.86;ReadPosRankSum=0.685;SOR=3.180 GT:AD:DP:GQ:PL 0/1:19,24:43:99:839,0,513 chr1 151727751 . G A 683.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.227;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=10.144;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.99;ReadPosRankSum=1.561;SOR=3.352 GT:AD:DP:GQ:PL 0/1:18,20:38:99:712,0,568 chr1 151728869 . A G 2106.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.343;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=1.251;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.17;ReadPosRankSum=0.181;SOR=0.555 GT:AD:DP:GQ:PL 0/1:80,80:160:99:2135,0,1990 chr1 151760181 . C G 882.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.643;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=1.784;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.51;ReadPosRankSum=-0.237;SOR=0.927 GT:AD:DP:GQ:PL 0/1:48,36:84:99:911,0,1242 chr1 151760224 . A G 941.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.539;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=4.956;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.65;ReadPosRankSum=0.052;SOR=0.286 GT:AD:DP:GQ:PL 0/1:28,41:69:99:970,0,690 chr1 151760859 . T G 459.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.188;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.101;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.58;ReadPosRankSum=-0.519;SOR=0.905 GT:AD:DP:GQ:PL 0/1:26,22:48:99:488,0,609 chr1 151767944 . G A 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.953;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.70;ReadPosRankSum=-1.062;SOR=0.437 GT:AD:DP:GQ:PL 0/1:20,11:31:99:298,0,674 chr1 151768003 . C A 2389.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.63;SOR=2.704 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2418,206,0 chr1 151769219 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 151769226 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 151769858 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.28;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 151769933 . A G 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=6.532;MLEAC=1;MLEAF=0.500;MQ=57.97;MQRankSum=0.282;QD=3.86;ReadPosRankSum=0.000;SOR=0.016 GT:AD:DP:GQ:PL 0/1:7,2:9:63:63,0,288 chr1 151770018 . A G 561.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.94;MQRankSum=-1.637;QD=21.61;ReadPosRankSum=1.371;SOR=1.220 GT:AD:DP:GQ:PL 0/1:10,16:26:99:590,0,339 chr1 151770322 . T C 1165.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.641;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=1.083;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.71;ReadPosRankSum=-0.974;SOR=0.901 GT:AD:DP:GQ:PL 0/1:47,38:85:99:1194,0,1371 chr1 151770484 . G A 77.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.241;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.64;ReadPosRankSum=0.210;SOR=0.495 GT:AD:DP:GQ:PL 0/1:5,4:9:99:106,0,148 chr1 151770888 . C A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.036;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 151771352 . G C 298.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.92;ReadPosRankSum=-1.521;SOR=1.112 GT:AD:DP:GQ:PL 0/1:6,9:15:99:327,0,205 chr1 151774567 . C T 1545.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.423;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=1.612;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=1.068;SOR=0.896 GT:AD:DP:GQ:PL 0/1:47,55:102:99:1574,0,1351 chr1 151775257 . C T 1668.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.477;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.38;ReadPosRankSum=1.193;SOR=0.621 GT:AD:DP:GQ:PL 0/1:39,57:96:99:1697,0,1102 chr1 151775323 . G A 1476.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.649;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=3.123;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.46;ReadPosRankSum=-0.513;SOR=0.399 GT:AD:DP:GQ:PL 0/1:34,46:80:99:1505,0,1099 chr1 151775494 . A G 1680.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.893;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=1.334;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.77;ReadPosRankSum=0.974;SOR=0.840 GT:AD:DP:GQ:PL 0/1:90,66:156:99:1709,0,2345 chr1 151775949 . C A 373.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.370;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=0.748;SOR=0.693 GT:AD:DP:GQ:PL 0/1:16,16:32:99:402,0,470 chr1 151778487 . C T 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 151778605 . G A 433.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.781;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=5.179;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.86;ReadPosRankSum=1.510;SOR=1.781 GT:AD:DP:GQ:PL 0/1:26,18:44:99:462,0,678 chr1 151781636 . T C 838.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.171;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=7.826;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.33;ReadPosRankSum=0.403;SOR=1.101 GT:AD:DP:GQ:PL 0/1:43,31:74:99:867,0,1186 chr1 151800676 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.26;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 151800691 . G A 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=1.465;SOR=0.061 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 151807701 . C T 2505.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.684;ClippingRankSum=0.000;DP=174;ExcessHet=3.0103;FS=4.633;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.40;ReadPosRankSum=-1.424;SOR=0.437 GT:AD:DP:GQ:PL 0/1:80,94:174:99:2534,0,2265 chr1 151811121 . C T 167.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.32;ReadPosRankSum=0.322;SOR=0.255 GT:AD:DP:GQ:PL 0/1:12,6:18:99:196,0,447 chr1 151811212 . A C 1168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.018;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=1.209;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.291;SOR=0.875 GT:AD:DP:GQ:PL 0/1:52,37:89:99:1197,0,1702 chr1 151813805 . G A 268.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.411;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.92;ReadPosRankSum=-0.949;SOR=1.179 GT:AD:DP:GQ:PL 0/1:6,9:15:99:297,0,171 chr1 151817133 . C T 815.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.59;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,22:22:65:844,65,0 chr1 151817135 . C T 217.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.115;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=4.468;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.38;ReadPosRankSum=0.158;SOR=2.066 GT:AD:DP:GQ:PL 0/1:17,9:26:99:246,0,467 chr1 151817171 . T G 667.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.126;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=1.095;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.60;ReadPosRankSum=-1.793;SOR=0.489 GT:AD:DP:GQ:PL 0/1:36,27:63:99:696,0,1099 chr1 151817835 . G A 40.10 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.02;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:11:68,11,0 chr1 151819834 . G A 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr1 151829475 . G A 1190.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.523;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.95;ReadPosRankSum=0.663;SOR=0.654 GT:AD:DP:GQ:PL 0/1:77,56:133:99:1219,0,1927 chr1 151831188 . C T 1088.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.195;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.77;ReadPosRankSum=-1.145;SOR=0.837 GT:AD:DP:GQ:PL 0/1:23,35:58:99:1117,0,684 chr1 151831288 . G C 226.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.736;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.392;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=-1.024;SOR=0.175 GT:AD:DP:GQ:PL 0/1:8,9:17:99:255,0,249 chr1 151837828 . G C 493.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.51;ReadPosRankSum=2.016;SOR=1.508 GT:AD:DP:GQ:PL 0/1:7,14:21:99:522,0,228 chr1 151838750 . G A 923.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.25;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,25:25:75:952,75,0 chr1 151845522 . T C 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.842;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,122 chr1 151847822 . G C 7470.77 PASS AC=2;AF=1.00;AN=2;DP=234;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.06;SOR=0.810 GT:AD:DP:GQ:PL 1/1:0,233:233:99:7499,698,0 chr1 151847848 . T C 7680.77 PASS AC=2;AF=1.00;AN=2;DP=245;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.48;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,244:244:99:7709,730,0 chr1 151853237 . G C 250.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.590;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.94;ReadPosRankSum=0.428;SOR=0.919 GT:AD:DP:GQ:PL 0/1:12,9:21:99:279,0,366 chr1 151853515 . G T 2478.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.282;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=0.352;SOR=0.962 GT:AD:DP:GQ:PL 0/1:107,100:207:99:2507,0,2754 chr1 151889001 . A G 574.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.69;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:603,45,0 chr1 151890185 . G A 569.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.61;ReadPosRankSum=-0.871;SOR=0.569 GT:AD:DP:GQ:PL 0/1:19,20:39:99:598,0,494 chr1 151895084 . G A 2383.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.83;QD=34.05;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2412,210,0 chr1 151909409 . A C 3552.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.83;SOR=2.397 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3581,306,0 chr1 151950332 . C T 325.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.981;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=0.351;SOR=0.960 GT:AD:DP:GQ:PL 0/1:15,15:30:99:354,0,317 chr1 151982416 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 151993872 . C T 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.19;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:69,0,37 chr1 152012071 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 152012080 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 152018505 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 152018664 . G C 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.736;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=2.447;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=1.494;SOR=0.132 GT:AD:DP:GQ:PL 0/1:8,8:16:99:218,0,240 chr1 152037054 . T C 790.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.38;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,23:23:69:819,69,0 chr1 152085716 . G A 843.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.718;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=5.552;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.07;ReadPosRankSum=1.126;SOR=0.363 GT:AD:DP:GQ:PL 0/1:23,33:56:99:872,0,657 chr1 152088320 . A T 624.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.88;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,19:19:57:653,57,0 chr1 152107347 . C G 5405.77 PASS AC=2;AF=1.00;AN=2;DP=164;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.16;SOR=1.144 GT:AD:DP:GQ:PL 1/1:0,163:163:99:5434,489,0 chr1 152107513 . T G 6496.77 PASS AC=2;AF=1.00;AN=2;DP=190;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.19;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,190:190:99:6525,570,0 chr1 152109445 . G C 5113.77 PASS AC=2;AF=1.00;AN=2;DP=156;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.78;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,156:156:99:5142,468,0 chr1 152111269 . C T 1117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.148;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=1.909;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.71;ReadPosRankSum=0.042;SOR=0.982 GT:AD:DP:GQ:PL 0/1:34,42:76:99:1146,0,815 chr1 152113029 . A C 3307.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.11;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3336,309,0 chr1 152154979 . T C 2915.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.444;ClippingRankSum=0.000;DP=242;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=-1.686;SOR=0.671 GT:AD:DP:GQ:PL 0/1:137,105:242:99:2944,0,3682 chr1 152169611 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 152189218 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 152189233 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 152189259 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 152199807 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 152213024 . C G 522.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.91;ReadPosRankSum=0.872;SOR=1.136 GT:AD:DP:GQ:PL 0/1:10,15:25:99:551,0,342 chr1 152213274 . G A 5572.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.104;ClippingRankSum=0.000;DP=234;ExcessHet=3.0103;FS=2.085;MLEAC=1;MLEAF=0.500;MQ=59.61;MQRankSum=5.336;QD=23.92;ReadPosRankSum=-1.163;SOR=0.919 GT:AD:DP:GQ:PL 0/1:47,186:233:99:5601,0,1310 chr1 152213286 . C G 842.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.186;ClippingRankSum=0.000;DP=234;ExcessHet=3.0103;FS=4.391;MLEAC=1;MLEAF=0.500;MQ=59.61;MQRankSum=-6.265;QD=3.62;ReadPosRankSum=0.558;SOR=0.609 GT:AD:DP:GQ:PL 0/1:197,36:233:99:871,0,8375 chr1 152213292 . T G 781.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.603;ClippingRankSum=0.000;DP=235;ExcessHet=3.0103;FS=5.854;MLEAC=1;MLEAF=0.500;MQ=59.61;MQRankSum=-6.610;QD=3.34;ReadPosRankSum=-0.191;SOR=0.691 GT:AD:DP:GQ:PL 0/1:201,33:234:99:810,0,8464 chr1 152213298 . A G 731.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.783;ClippingRankSum=0.000;DP=239;ExcessHet=3.0103;FS=5.931;MLEAC=1;MLEAF=0.500;MQ=59.61;MQRankSum=-6.794;QD=3.07;ReadPosRankSum=-1.394;SOR=0.815 GT:AD:DP:GQ:PL 0/1:206,32:238:99:760,0,8635 chr1 152213304 . G A 632.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.840;ClippingRankSum=0.000;DP=240;ExcessHet=3.0103;FS=7.501;MLEAC=1;MLEAF=0.500;MQ=59.62;MQRankSum=-6.936;QD=2.65;ReadPosRankSum=-2.756;SOR=0.906 GT:AD:DP:GQ:PL 0/1:208,31:239:99:661,0,8851 chr1 152213316 . G A 565.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.100;ClippingRankSum=0.000;DP=246;ExcessHet=3.0103;FS=6.269;MLEAC=1;MLEAF=0.500;MQ=59.23;MQRankSum=-3.766;QD=2.31;ReadPosRankSum=-4.875;SOR=0.969 GT:AD:DP:GQ:PL 0/1:216,29:245:99:594,0,9189 chr1 152215700 . G A 2349.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.830;ClippingRankSum=0.000;DP=209;ExcessHet=3.0103;FS=4.330;MLEAC=1;MLEAF=0.500;MQ=41.90;MQRankSum=-1.293;QD=11.24;ReadPosRankSum=-2.805;SOR=0.445 GT:AD:DP:GQ:PL 0/1:118,91:209:99:2378,0,3005 chr1 152219211 . A G 9299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.880;ClippingRankSum=0.000;DP=455;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.48;ReadPosRankSum=-0.871;SOR=0.726 GT:AD:DP:GQ:PL 0/1:212,242:454:99:9328,0,8102 chr1 152219220 . G C 9213.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.501;ClippingRankSum=0.000;DP=452;ExcessHet=3.0103;FS=0.521;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.43;ReadPosRankSum=0.218;SOR=0.789 GT:AD:DP:GQ:PL 0/1:214,237:451:99:9242,0,8341 chr1 152219233 . C G 6307.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.221;ClippingRankSum=0.000;DP=451;ExcessHet=3.0103;FS=1.101;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.02;ReadPosRankSum=-1.950;SOR=0.596 GT:AD:DP:GQ:PL 0/1:231,219:450:99:6336,0,8875 chr1 152219403 . G A 7308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.724;ClippingRankSum=0.000;DP=469;ExcessHet=3.0103;FS=2.450;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.62;ReadPosRankSum=0.998;SOR=0.912 GT:AD:DP:GQ:PL 0/1:218,250:468:99:7337,0,6111 chr1 152219638 . C T 4309.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.313;ClippingRankSum=0.000;DP=282;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.02;MQRankSum=4.126;QD=15.34;ReadPosRankSum=0.032;SOR=0.706 GT:AD:DP:GQ:PL 0/1:140,141:281:99:4338,0,4272 chr1 152219817 . C T 4236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.358;ClippingRankSum=0.000;DP=275;ExcessHet=3.0103;FS=2.002;MLEAC=1;MLEAF=0.500;MQ=57.44;MQRankSum=-8.514;QD=15.46;ReadPosRankSum=0.012;SOR=0.664 GT:AD:DP:GQ:PL 0/1:129,145:274:99:4265,0,3670 chr1 152220155 . C T 6356.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.605;ClippingRankSum=0.000;DP=463;ExcessHet=3.0103;FS=2.444;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.73;ReadPosRankSum=0.018;SOR=0.820 GT:AD:DP:GQ:PL 0/1:227,236:463:99:6385,0,6220 chr1 152220211 . T C 13979.77 PASS AC=2;AF=1.00;AN=2;DP=420;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.29;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,420:420:99:14008,1260,0 chr1 152220502 . T C 18884.77 PASS AC=2;AF=1.00;AN=2;DP=561;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,559:559:99:18913,1681,0 chr1 152220576 . A G 18704.77 PASS AC=2;AF=1.00;AN=2;DP=543;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.70;SOR=0.839 GT:AD:DP:GQ:PL 1/1:0,539:539:99:18733,1619,0 chr1 152220645 . G T 6956.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.186;ClippingRankSum=0.000;DP=512;ExcessHet=3.0103;FS=3.232;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.64;ReadPosRankSum=-1.749;SOR=0.488 GT:AD:DP:GQ:PL 0/1:258,252:510:99:6985,0,7171 chr1 152220686 . C T 6368.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.521;ClippingRankSum=0.000;DP=467;ExcessHet=3.0103;FS=5.932;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.67;ReadPosRankSum=1.515;SOR=1.093 GT:AD:DP:GQ:PL 0/1:241,225:466:99:6397,0,6874 chr1 152220815 . G T 6796.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=465;ExcessHet=3.0103;FS=3.246;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.62;ReadPosRankSum=-0.277;SOR=0.493 GT:AD:DP:GQ:PL 0/1:221,244:465:99:6825,0,6210 chr1 152221068 . A G 5244.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.030;ClippingRankSum=0.000;DP=371;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.14;ReadPosRankSum=0.350;SOR=0.704 GT:AD:DP:GQ:PL 0/1:175,196:371:99:5273,0,4547 chr1 152221071 . G A 14073.77 PASS AC=2;AF=1.00;AN=2;DP=362;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.36;SOR=1.481 GT:AD:DP:GQ:PL 1/1:0,362:362:99:14102,1096,0 chr1 152221129 . C T 2620.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.747;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=1.180;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.66;ReadPosRankSum=0.908;SOR=0.814 GT:AD:DP:GQ:PL 0/1:114,93:207:99:2649,0,3282 chr1 152221375 . C T 1084.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.217;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.07;ReadPosRankSum=-1.883;SOR=0.637 GT:AD:DP:GQ:PL 0/1:40,43:83:99:1113,0,1013 chr1 152221514 . A G 393.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.025;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.58;ReadPosRankSum=1.352;SOR=0.784 GT:AD:DP:GQ:PL 0/1:14,15:29:99:422,0,391 chr1 152222883 . A G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.000;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 152223103 . G A 828.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.444;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.951;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.76;ReadPosRankSum=-1.602;SOR=0.930 GT:AD:DP:GQ:PL 0/1:45,32:77:99:857,0,1274 chr1 152304107 . 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C A 2883.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.078;ClippingRankSum=0.000;DP=237;ExcessHet=3.0103;FS=9.627;MLEAC=1;MLEAF=0.500;MQ=52.65;MQRankSum=-2.009;QD=12.17;ReadPosRankSum=-2.126;SOR=1.240 GT:AD:DP:GQ:PL 0/1:129,108:237:99:2912,0,3814 chr1 152306079 . T C 2166.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.002;ClippingRankSum=0.000;DP=401;ExcessHet=3.0103;FS=1.482;MLEAC=1;MLEAF=0.500;MQ=48.31;MQRankSum=-1.593;QD=5.40;ReadPosRankSum=0.527;SOR=0.557 GT:AD:DP:GQ:PL 0/1:298,103:401:99:2195,0,9363 chr1 152306213 . C A 13634.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.896;ClippingRankSum=0.000;DP=905;ExcessHet=3.0103;FS=4.968;MLEAC=1;MLEAF=0.500;MQ=53.69;MQRankSum=-3.229;QD=15.07;ReadPosRankSum=-1.307;SOR=0.981 GT:AD:DP:GQ:PL 0/1:416,489:905:99:13663,0,11645 chr1 152307253 . C T 9338.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.371;ClippingRankSum=0.000;DP=738;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.71;ReadPosRankSum=0.660;SOR=0.651 GT:AD:DP:GQ:PL 0/1:382,353:735:99:9367,0,10013 chr1 152307365 . G C 5959.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.486;ClippingRankSum=0.000;DP=438;ExcessHet=3.0103;FS=1.829;MLEAC=1;MLEAF=0.500;MQ=59.96;MQRankSum=-2.571;QD=13.64;ReadPosRankSum=0.664;SOR=0.864 GT:AD:DP:GQ:PL 0/1:228,209:437:99:5988,0,6267 chr1 152307444 . A G 3408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.166;ClippingRankSum=0.000;DP=231;ExcessHet=3.0103;FS=1.067;MLEAC=1;MLEAF=0.500;MQ=59.92;MQRankSum=-2.571;QD=14.76;ReadPosRankSum=-1.181;SOR=0.619 GT:AD:DP:GQ:PL 0/1:120,111:231:99:3437,0,3723 chr1 152307488 . 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A G 19148.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.419;ClippingRankSum=0.000;DP=748;ExcessHet=3.0103;FS=0.550;MLEAC=1;MLEAF=0.500;MQ=58.58;MQRankSum=-6.801;QD=25.63;ReadPosRankSum=1.798;SOR=0.622 GT:AD:DP:GQ:PL 0/1:270,477:747:99:19177,0,9659 chr1 152308312 . T G 19087.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.245;ClippingRankSum=0.000;DP=740;ExcessHet=3.0103;FS=0.550;MLEAC=1;MLEAF=0.500;MQ=58.45;MQRankSum=-7.041;QD=25.83;ReadPosRankSum=1.264;SOR=0.635 GT:AD:DP:GQ:PL 0/1:264,475:739:99:19116,0,9542 chr1 152308388 . A G 9017.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.829;ClippingRankSum=0.000;DP=465;ExcessHet=3.0103;FS=6.588;MLEAC=1;MLEAF=0.500;MQ=57.48;MQRankSum=-7.543;QD=19.39;ReadPosRankSum=0.506;SOR=1.145 GT:AD:DP:GQ:PL 0/1:166,299:465:99:9046,0,4577 chr1 152308424 . T G 1506.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.092;ClippingRankSum=0.000;DP=393;ExcessHet=3.0103;FS=28.694;MLEAC=1;MLEAF=0.500;MQ=57.46;MQRankSum=-19.044;QD=3.83;ReadPosRankSum=2.454;SOR=1.879 GT:AD:DP:GQ:PL 0/1:313,80:393:99:1535,0,9759 chr1 152308841 . G T 5383.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.454;ClippingRankSum=0.000;DP=401;ExcessHet=3.0103;FS=3.227;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=-0.616;SOR=0.957 GT:AD:DP:GQ:PL 0/1:206,195:401:99:5412,0,6174 chr1 152309003 . G T 7022.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.335;ClippingRankSum=0.000;DP=468;ExcessHet=3.0103;FS=0.522;MLEAC=1;MLEAF=0.500;MQ=59.97;MQRankSum=1.526;QD=15.01;ReadPosRankSum=0.122;SOR=0.774 GT:AD:DP:GQ:PL 0/1:217,251:468:99:7051,0,6020 chr1 152309215 . G A 9560.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.143;ClippingRankSum=0.000;DP=660;ExcessHet=3.0103;FS=1.097;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.51;ReadPosRankSum=1.193;SOR=0.605 GT:AD:DP:GQ:PL 0/1:307,352:659:99:9589,0,8369 chr1 152309269 . G T 8678.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.016;ClippingRankSum=0.000;DP=589;ExcessHet=3.0103;FS=1.756;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.76;ReadPosRankSum=-0.777;SOR=0.559 GT:AD:DP:GQ:PL 0/1:271,317:588:99:8707,0,7194 chr1 152309431 . A G 870.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.933;ClippingRankSum=0.000;DP=323;ExcessHet=3.0103;FS=15.324;MLEAC=1;MLEAF=0.500;MQ=58.95;MQRankSum=-13.592;QD=2.70;ReadPosRankSum=-2.003;SOR=1.452 GT:AD:DP:GQ:PL 0/1:281,41:322:99:899,0,14818 chr1 152309435 . T C 1002.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.522;ClippingRankSum=0.000;DP=327;ExcessHet=3.0103;FS=14.090;MLEAC=1;MLEAF=0.500;MQ=58.96;MQRankSum=-12.825;QD=3.07;ReadPosRankSum=-1.436;SOR=1.436 GT:AD:DP:GQ:PL 0/1:281,46:327:99:1031,0,14732 chr1 152309616 . T C 1452.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.204;ClippingRankSum=0.000;DP=380;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.75;MQRankSum=-13.846;QD=3.82;ReadPosRankSum=-1.453;SOR=0.711 GT:AD:DP:GQ:PL 0/1:320,60:380:99:1481,0,18275 chr1 152309625 . T C 1368.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=5.400;ClippingRankSum=0.000;DP=377;ExcessHet=3.0103;FS=1.135;MLEAC=1;MLEAF=0.500;MQ=58.75;MQRankSum=-14.270;QD=3.63;ReadPosRankSum=-3.799;SOR=0.575 GT:AD:DP:GQ:PL 0/1:322,55:377:99:1397,0,18577 chr1 152309628 . C T 1212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=5.133;ClippingRankSum=0.000;DP=374;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.74;MQRankSum=-14.681;QD=3.24;ReadPosRankSum=-4.266;SOR=0.669 GT:AD:DP:GQ:PL 0/1:322,52:374:99:1241,0,18508 chr1 152309635 . T C 1147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.913;ClippingRankSum=0.000;DP=378;ExcessHet=3.0103;FS=0.574;MLEAC=1;MLEAF=0.500;MQ=58.75;MQRankSum=-15.650;QD=3.04;ReadPosRankSum=-5.403;SOR=0.775 GT:AD:DP:GQ:PL 0/1:331,47:378:99:1176,0,18620 chr1 152310318 . G A 3765.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.067;ClippingRankSum=0.000;DP=276;ExcessHet=3.0103;FS=6.565;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.64;ReadPosRankSum=-0.770;SOR=1.067 GT:AD:DP:GQ:PL 0/1:143,133:276:99:3794,0,4188 chr1 152310434 . G C 3457.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.654;ClippingRankSum=0.000;DP=263;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.15;ReadPosRankSum=1.765;SOR=0.682 GT:AD:DP:GQ:PL 0/1:139,124:263:99:3486,0,3904 chr1 152310476 . A G 3201.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.156;ClippingRankSum=0.000;DP=262;ExcessHet=3.0103;FS=1.483;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.22;ReadPosRankSum=-1.613;SOR=0.613 GT:AD:DP:GQ:PL 0/1:135,127:262:99:3230,0,3936 chr1 152310577 . G A 3049.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.209;ClippingRankSum=0.000;DP=238;ExcessHet=3.0103;FS=3.605;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.81;ReadPosRankSum=1.036;SOR=0.932 GT:AD:DP:GQ:PL 0/1:126,112:238:99:3078,0,3588 chr1 152310760 . T C 4637.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.201;ClippingRankSum=0.000;DP=356;ExcessHet=3.0103;FS=1.267;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=-0.063;SOR=0.609 GT:AD:DP:GQ:PL 0/1:185,169:354:99:4666,0,5421 chr1 152311386 . G C 3630.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.626;ClippingRankSum=0.000;DP=205;ExcessHet=3.0103;FS=4.062;MLEAC=1;MLEAF=0.500;MQ=56.87;MQRankSum=-3.211;QD=17.80;ReadPosRankSum=-1.581;SOR=0.470 GT:AD:DP:GQ:PL 0/1:82,122:204:99:3659,0,2291 chr1 152311499 . A G 4010.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.598;ClippingRankSum=0.000;DP=271;ExcessHet=3.0103;FS=7.663;MLEAC=1;MLEAF=0.500;MQ=55.18;MQRankSum=-4.080;QD=14.80;ReadPosRankSum=-0.096;SOR=0.400 GT:AD:DP:GQ:PL 0/1:135,136:271:99:4039,0,3907 chr1 152311948 . G C 6219.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.087;ClippingRankSum=0.000;DP=425;ExcessHet=3.0103;FS=5.942;MLEAC=1;MLEAF=0.500;MQ=57.98;MQRankSum=-7.740;QD=14.67;ReadPosRankSum=0.646;SOR=0.976 GT:AD:DP:GQ:PL 0/1:209,215:424:99:6248,0,5984 chr1 152312002 . A G 1685.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.872;ClippingRankSum=0.000;DP=469;ExcessHet=3.0103;FS=28.715;MLEAC=1;MLEAF=0.500;MQ=57.03;MQRankSum=-19.175;QD=3.60;ReadPosRankSum=-1.150;SOR=2.945 GT:AD:DP:GQ:PL 0/1:396,72:468:99:1714,0,15914 chr1 152312021 . A G 2055.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.313;ClippingRankSum=0.000;DP=470;ExcessHet=3.0103;FS=13.239;MLEAC=1;MLEAF=0.500;MQ=57.30;MQRankSum=-20.653;QD=4.38;ReadPosRankSum=-0.090;SOR=1.746 GT:AD:DP:GQ:PL 0/1:393,76:469:99:2084,0,16619 chr1 152312029 . C G 2097.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.080;ClippingRankSum=0.000;DP=490;ExcessHet=3.0103;FS=3.428;MLEAC=1;MLEAF=0.500;MQ=57.14;MQRankSum=-21.725;QD=4.31;ReadPosRankSum=-0.512;SOR=1.006 GT:AD:DP:GQ:PL 0/1:402,85:487:99:2126,0,16476 chr1 152312065 . G A 1483.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-4.991;ClippingRankSum=0.000;DP=535;ExcessHet=3.0103;FS=3.232;MLEAC=1;MLEAF=0.500;MQ=56.66;MQRankSum=-22.730;QD=2.78;ReadPosRankSum=0.939;SOR=0.947 GT:AD:DP:GQ:PL 0/1:426,108:534:99:1512,0,12970 chr1 152312100 . C A 2240.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.335;ClippingRankSum=0.000;DP=534;ExcessHet=3.0103;FS=10.684;MLEAC=1;MLEAF=0.500;MQ=57.22;MQRankSum=-22.952;QD=4.20;ReadPosRankSum=4.583;SOR=1.544 GT:AD:DP:GQ:PL 0/1:442,92:534:99:2269,0,18043 chr1 152312121 . A C 1874.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.643;ClippingRankSum=0.000;DP=526;ExcessHet=3.0103;FS=18.230;MLEAC=1;MLEAF=0.500;MQ=57.53;MQRankSum=-22.816;QD=3.56;ReadPosRankSum=2.853;SOR=2.122 GT:AD:DP:GQ:PL 0/1:448,78:526:99:1903,0,18842 chr1 152312147 . G A 1439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.393;ClippingRankSum=0.000;DP=506;ExcessHet=3.0103;FS=17.462;MLEAC=1;MLEAF=0.500;MQ=57.87;MQRankSum=-22.401;QD=2.85;ReadPosRankSum=-3.992;SOR=2.396 GT:AD:DP:GQ:PL 0/1:440,66:506:99:1468,0,18568 chr1 152312153 . T C 1286.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.853;ClippingRankSum=0.000;DP=490;ExcessHet=3.0103;FS=20.991;MLEAC=1;MLEAF=0.500;MQ=58.00;MQRankSum=-22.055;QD=2.63;ReadPosRankSum=-4.853;SOR=2.717 GT:AD:DP:GQ:PL 0/1:431,59:490:99:1315,0,18370 chr1 152312378 . A G 4070.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.301;ClippingRankSum=0.000;DP=334;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.97;MQRankSum=-1.043;QD=12.19;ReadPosRankSum=0.867;SOR=0.669 GT:AD:DP:GQ:PL 0/1:175,159:334:99:4099,0,4790 chr1 152312623 . C T 4797.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.534;ClippingRankSum=0.000;DP=370;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.98;MQRankSum=-1.033;QD=13.04;ReadPosRankSum=0.436;SOR=0.677 GT:AD:DP:GQ:PL 0/1:191,177:368:99:4826,0,5383 chr1 152312705 . G T 4516.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.866;ClippingRankSum=0.000;DP=349;ExcessHet=3.0103;FS=1.264;MLEAC=1;MLEAF=0.500;MQ=59.99;MQRankSum=-1.053;QD=12.98;ReadPosRankSum=0.455;SOR=0.615 GT:AD:DP:GQ:PL 0/1:184,164:348:99:4545,0,5456 chr1 152313454 . G A 2901.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.065;ClippingRankSum=0.000;DP=211;ExcessHet=3.0103;FS=0.507;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.75;ReadPosRankSum=-1.415;SOR=0.771 GT:AD:DP:GQ:PL 0/1:110,101:211:99:2930,0,2866 chr1 152313526 . T C 3863.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.370;ClippingRankSum=0.000;DP=257;ExcessHet=3.0103;FS=3.477;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=0.341;SOR=0.893 GT:AD:DP:GQ:PL 0/1:113,142:255:99:3892,0,3145 chr1 152313891 . C A 4611.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.006;ClippingRankSum=0.000;DP=378;ExcessHet=3.0103;FS=2.171;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.20;ReadPosRankSum=-1.247;SOR=0.805 GT:AD:DP:GQ:PL 0/1:199,179:378:99:4640,0,5301 chr1 152356893 . C G 2029.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.043;ClippingRankSum=0.000;DP=177;ExcessHet=3.0103;FS=8.733;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.47;ReadPosRankSum=1.756;SOR=0.616 GT:AD:DP:GQ:PL 0/1:93,84:177:99:2058,0,2710 chr1 152412357 . T C 1250.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.27;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1279,120,0 chr1 152412469 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.97;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 152418145 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 152418252 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 152442504 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 152442590 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 152475515 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 152511653 . G A 943.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.666;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=0.895;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=0.023;SOR=0.615 GT:AD:DP:GQ:PL 0/1:37,35:72:99:972,0,1091 chr1 152515503 . C T 607.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.175;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=1.064;MLEAC=1;MLEAF=0.500;MQ=59.70;MQRankSum=0.000;QD=11.25;ReadPosRankSum=-0.614;SOR=0.512 GT:AD:DP:GQ:PL 0/1:33,21:54:99:636,0,902 chr1 152515587 . C T 352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.876;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=3.014;MLEAC=1;MLEAF=0.500;MQ=58.69;MQRankSum=0.000;QD=9.80;ReadPosRankSum=-1.317;SOR=0.518 GT:AD:DP:GQ:PL 0/1:21,15:36:99:381,0,632 chr1 152515670 . G A 305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.881;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.73;MQRankSum=0.000;QD=12.23;ReadPosRankSum=0.623;SOR=0.804 GT:AD:DP:GQ:PL 0/1:12,13:25:99:334,0,427 chr1 152537667 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 152537668 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 152557649 . G A 132.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:160,12,0 chr1 152565882 . G C 1166.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.613;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=0.764;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.90;ReadPosRankSum=-0.776;SOR=0.576 GT:AD:DP:GQ:PL 0/1:60,47:107:99:1195,0,1672 chr1 152579809 . C A 2468.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.214;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.98;MQRankSum=0.629;QD=16.91;ReadPosRankSum=0.425;SOR=0.653 GT:AD:DP:GQ:PL 0/1:65,81:146:99:2497,0,1719 chr1 152628471 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 152664674 . A T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-1.383;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 152676638 . T A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 152676661 . C G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 152686790 . G T 1098.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.243;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=2.944;MLEAC=1;MLEAF=0.500;MQ=59.86;MQRankSum=1.319;QD=18.01;ReadPosRankSum=-0.643;SOR=0.283 GT:AD:DP:GQ:PL 0/1:23,38:61:99:1127,0,671 chr1 152686995 . T G 2115.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.079;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=0.585;MLEAC=1;MLEAF=0.500;MQ=59.87;MQRankSum=0.045;QD=13.31;ReadPosRankSum=0.048;SOR=0.754 GT:AD:DP:GQ:PL 0/1:77,82:159:99:2144,0,2140 chr1 152699437 . C G 331.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.611;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.46;ReadPosRankSum=-1.106;SOR=0.793 GT:AD:DP:GQ:PL 0/1:9,10:19:99:360,0,291 chr1 152705251 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 152709359 . G T 573.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.152;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=1.035;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.11;ReadPosRankSum=0.036;SOR=0.513 GT:AD:DP:GQ:PL 0/1:38,25:63:99:602,0,999 chr1 152719467 . G A 1201.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.205;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.858;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.78;ReadPosRankSum=-0.076;SOR=0.549 GT:AD:DP:GQ:PL 0/1:48,46:94:99:1230,0,1309 chr1 152719598 . G C 2603.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.911;ClippingRankSum=0.000;DP=224;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=-1.328;SOR=0.671 GT:AD:DP:GQ:PL 0/1:121,102:223:99:2632,0,3373 chr1 152719996 . A C 3423.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.748;ClippingRankSum=0.000;DP=238;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.51;ReadPosRankSum=-1.934;SOR=0.683 GT:AD:DP:GQ:PL 0/1:111,125:236:99:3452,0,3160 chr1 152720112 . A G 3001.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.084;ClippingRankSum=0.000;DP=228;ExcessHet=3.0103;FS=1.018;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.17;ReadPosRankSum=-1.313;SOR=0.776 GT:AD:DP:GQ:PL 0/1:117,111:228:99:3030,0,3372 chr1 152720305 . G T 1385.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.330;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=1.535;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.26;ReadPosRankSum=-1.129;SOR=0.517 GT:AD:DP:GQ:PL 0/1:66,47:113:99:1414,0,1984 chr1 152720386 . G C 1098.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.694;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.21;ReadPosRankSum=-0.290;SOR=0.619 GT:AD:DP:GQ:PL 0/1:55,43:98:99:1127,0,1449 chr1 152720472 . T A 1005.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.657;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=3.137;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.86;ReadPosRankSum=0.367;SOR=0.301 GT:AD:DP:GQ:PL 0/1:17,27:44:99:1034,0,622 chr1 152720476 . G A 1014.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.188;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=5.436;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.16;ReadPosRankSum=-0.389;SOR=0.204 GT:AD:DP:GQ:PL 0/1:15,27:42:99:1043,0,589 chr1 152720567 . C T 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=-0.524;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,137 chr1 152737420 . A C 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-0.431;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 152787515 . A T 1064.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.482;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=1.678;MLEAC=1;MLEAF=0.500;MQ=59.79;MQRankSum=-2.414;QD=10.98;ReadPosRankSum=-0.359;SOR=0.483 GT:AD:DP:GQ:PL 0/1:57,40:97:99:1093,0,1930 chr1 153023943 . A G 328.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.89;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:33:357,33,0 chr1 153112319 . G C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 153112830 . G A 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=-1.732;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,179 chr1 153140714 . C T 312.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.752;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.79;ReadPosRankSum=-2.391;SOR=0.999 GT:AD:DP:GQ:PL 0/1:17,12:29:99:341,0,487 chr1 153149695 . G A 418.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.86;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:447,33,0 chr1 153149834 . G A 1128.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.603;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.29;ReadPosRankSum=0.684;SOR=0.670 GT:AD:DP:GQ:PL 0/1:52,48:100:99:1157,0,1450 chr1 153150144 . T C 3854.77 PASS AC=2;AF=1.00;AN=2;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.34;SOR=0.848 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3883,369,0 chr1 153217900 . G C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 153217943 . A G 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.253;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr1 153225142 . C T 258.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.693;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=2.318;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.76;ReadPosRankSum=0.687;SOR=0.155 GT:AD:DP:GQ:PL 0/1:11,11:22:99:287,0,355 chr1 153225262 . T C 1073.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.549;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.78;ReadPosRankSum=0.188;SOR=0.637 GT:AD:DP:GQ:PL 0/1:35,29:64:99:1102,0,1827 chr1 153225266 . A G 1094.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.038;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.11;ReadPosRankSum=-0.632;SOR=0.612 GT:AD:DP:GQ:PL 0/1:34,30:64:99:1123,0,1824 chr1 153225310 . C T 838.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.577;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=4.802;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=-0.596;SOR=0.669 GT:AD:DP:GQ:PL 0/1:31,33:64:99:867,0,853 chr1 153225409 . A G 1042.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.435;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=2.030;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=0.639;SOR=0.761 GT:AD:DP:GQ:PL 0/1:30,37:67:99:1071,0,801 chr1 153225537 . G A 486.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.557;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=1.243;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.48;ReadPosRankSum=1.545;SOR=0.848 GT:AD:DP:GQ:PL 0/1:21,18:39:99:515,0,589 chr1 153225717 . C T 509.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.283;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=1.046;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=-0.057;SOR=0.525 GT:AD:DP:GQ:PL 0/1:35,21:56:99:538,0,986 chr1 153241716 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 153244867 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 153244880 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 153244887 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 153246870 . C A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:42:81,0,42 chr1 153261225 . A C 339.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.877;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.65;ReadPosRankSum=-0.393;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,10:15:99:368,0,130 chr1 153261819 . G A 2168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.102;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.27;ReadPosRankSum=-0.618;SOR=0.629 GT:AD:DP:GQ:PL 0/1:76,76:152:99:2197,0,2188 chr1 153262126 . T C 591.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.27;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:620,45,0 chr1 153262305 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 153297886 . C G 1627.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.750;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=2.093;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.50;ReadPosRankSum=1.254;SOR=0.232 GT:AD:DP:GQ:PL 0/1:45,48:93:99:1656,0,1562 chr1 153298381 . T C 306.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.039;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.17;ReadPosRankSum=0.418;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,10:16:99:335,0,202 chr1 153299048 . C T 1016.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.275;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=1.071;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.89;ReadPosRankSum=-1.391;SOR=0.866 GT:AD:DP:GQ:PL 0/1:30,34:64:99:1045,0,863 chr1 153304947 . C T 1478.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.768;ClippingRankSum=0.000;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.60;ReadPosRankSum=-0.092;SOR=0.683 GT:AD:DP:GQ:PL 0/1:93,61:154:99:1507,0,2454 chr1 153305184 . A T 943.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.398;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.08;ReadPosRankSum=-2.009;SOR=0.741 GT:AD:DP:GQ:PL 0/1:13,34:47:99:972,0,300 chr1 153305292 . C T 280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.447;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.52;ReadPosRankSum=-0.660;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,9:11:50:309,0,50 chr1 153306798 . A G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.07;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 153309596 . C A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 153310416 . C T 505.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.268;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.99;ReadPosRankSum=0.401;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,16:22:99:534,0,184 chr1 153310528 . C T 3614.77 PASS AC=2;AF=1.00;AN=2;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.16;SOR=1.675 GT:AD:DP:GQ:PL 1/1:0,109:109:99:3643,327,0 chr1 153310703 . A G 1131.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.266;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=3.249;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.01;ReadPosRankSum=-0.562;SOR=0.395 GT:AD:DP:GQ:PL 0/1:44,43:87:99:1160,0,1292 chr1 153319654 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 153331162 . A G 578.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.120;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.242;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=0.847;SOR=0.504 GT:AD:DP:GQ:PL 0/1:26,22:48:99:607,0,745 chr1 153337505 . G A 576.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.526;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.02;ReadPosRankSum=1.611;SOR=0.533 GT:AD:DP:GQ:PL 0/1:24,24:48:99:605,0,640 chr1 153337680 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 153340168 . A G 1824.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.18;SOR=2.024 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1853,165,0 chr1 153341436 . A G 780.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.47;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,21:21:63:809,63,0 chr1 153341677 . C A 6883.77 PASS AC=2;AF=1.00;AN=2;DP=210;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.78;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,210:210:99:6912,631,0 chr1 153341871 . C T 1579.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.58;SOR=4.565 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1608,123,0 chr1 153343103 . A G 5287.77 PASS AC=2;AF=1.00;AN=2;DP=163;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.44;SOR=0.921 GT:AD:DP:GQ:PL 1/1:0,163:163:99:5316,489,0 chr1 153343308 . T C 2123.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.67;SOR=1.875 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2152,195,0 chr1 153347649 . A T 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr1 153347683 . G C 398.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.10;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:427,33,0 chr1 153347858 . T C 3862.77 PASS AC=2;AF=1.00;AN=2;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.30;SOR=1.510 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3891,348,0 chr1 153347896 . T G 5034.77 PASS AC=2;AF=1.00;AN=2;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=0.998 GT:AD:DP:GQ:PL 1/1:0,155:155:99:5063,465,0 chr1 153348105 . T C 1972.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.48;SOR=4.450 GT:AD:DP:GQ:PL 1/1:0,49:49:99:2001,147,0 chr1 153348199 . G A 321.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.18;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:30:350,30,0 chr1 153373787 . A G 1622.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.18;SOR=2.935 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1651,135,0 chr1 153379651 . C T 773.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.10;SOR=3.160 GT:AD:DP:GQ:PL 1/1:0,21:21:63:802,63,0 chr1 153380555 . T G 296.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:27:325,27,0 chr1 153380693 . G A 245.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.31;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:27:274,27,0 chr1 153380722 . A G 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr1 153388202 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 153390031 . A G 856.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,22:22:66:885,66,0 chr1 153390629 . T C 2032.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.75;SOR=3.651 GT:AD:DP:GQ:PL 1/1:0,55:55:99:2061,165,0 chr1 153398249 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 153404185 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 153417113 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 153418066 . G C 423.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.553;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=2.612;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.011;SOR=1.469 GT:AD:DP:GQ:PL 0/1:37,15:52:99:452,0,1303 chr1 153418920 . G C 194.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.64;ReadPosRankSum=-1.180;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,6:9:98:223,0,98 chr1 153419253 . G A 2323.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.190;ClippingRankSum=0.000;DP=203;ExcessHet=3.0103;FS=1.747;MLEAC=1;MLEAF=0.500;MQ=59.78;MQRankSum=-2.614;QD=11.45;ReadPosRankSum=0.290;SOR=0.562 GT:AD:DP:GQ:PL 0/1:107,96:203:99:2352,0,2895 chr1 153419310 . T C 2636.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.089;ClippingRankSum=0.000;DP=237;ExcessHet=3.0103;FS=1.576;MLEAC=1;MLEAF=0.500;MQ=59.81;MQRankSum=-2.657;QD=11.13;ReadPosRankSum=0.580;SOR=0.834 GT:AD:DP:GQ:PL 0/1:127,110:237:99:2665,0,3150 chr1 153419566 . A C 188.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.41;QD=28.34;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:217,15,0 chr1 153419568 . C G 188.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.41;QD=30.89;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:217,15,0 chr1 153419826 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 153438346 . C A 950.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.604;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=1.103;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.19;ReadPosRankSum=0.529;SOR=0.903 GT:AD:DP:GQ:PL 0/1:33,34:67:99:979,0,892 chr1 153439916 . T G 2811.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.336;ClippingRankSum=0.000;DP=213;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=-0.451;SOR=0.706 GT:AD:DP:GQ:PL 0/1:107,105:212:99:2840,0,2839 chr1 153458724 . T C 1724.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.363;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.96;MQRankSum=-2.949;QD=18.16;ReadPosRankSum=-0.128;SOR=0.829 GT:AD:DP:GQ:PL 0/1:42,53:95:99:1753,0,1239 chr1 153458930 . C G 6821.77 PASS AC=2;AF=1.00;AN=2;DP=213;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.33;SOR=1.104 GT:AD:DP:GQ:PL 1/1:0,211:211:99:6850,633,0 chr1 153476698 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 153476754 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 153479999 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 153514715 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 153514736 . T A 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr1 153514749 . C G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 153537414 . T C 2498.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.073;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.68;ReadPosRankSum=-0.832;SOR=0.664 GT:AD:DP:GQ:PL 0/1:103,94:197:99:2527,0,2564 chr1 153565973 . C T 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 153609782 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 153609927 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.00;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 153609931 . T C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 153612510 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 153614780 . A T 2173.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.06;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2202,186,0 chr1 153614832 . C T 3121.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.93;SOR=1.559 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3150,276,0 chr1 153615732 . G A 4905.77 PASS AC=2;AF=1.00;AN=2;DP=148;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.15;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,148:148:99:4934,441,0 chr1 153615803 . G A 10138.77 PASS AC=2;AF=1.00;AN=2;DP=311;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=1.527 GT:AD:DP:GQ:PL 1/1:0,311:311:99:10167,932,0 chr1 153619176 . G A 975.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.93;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1004,78,0 chr1 153619294 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 153627648 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 153628302 . G A 3213.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.88;SOR=4.228 GT:AD:DP:GQ:PL 1/1:0,81:81:99:3242,243,0 chr1 153630385 . G C 842.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.27;SOR=6.273 GT:AD:DP:GQ:PL 1/1:0,22:22:66:871,66,0 chr1 153631553 . C T 6773.77 PASS AC=2;AF=1.00;AN=2;DP=195;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.92;SOR=1.104 GT:AD:DP:GQ:PL 1/1:0,194:194:99:6802,582,0 chr1 153631636 . G A 9149.77 PASS AC=2;AF=1.00;AN=2;DP=271;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.89;SOR=1.261 GT:AD:DP:GQ:PL 1/1:0,270:270:99:9178,808,0 chr1 153631946 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.86;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 153636563 . T C 2935.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.26;SOR=1.688 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2964,273,0 chr1 153647610 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 153658595 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 153662949 . G A 3010.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.57;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,76:76:99:3039,228,0 chr1 153663996 . T C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.270;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.63;ReadPosRankSum=1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,4:14:99:107,0,373 chr1 153664384 . A G 9808.77 PASS AC=2;AF=1.00;AN=2;DP=302;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,302:302:99:9837,905,0 chr1 153665141 . G A 693.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.53;SOR=2.948 GT:AD:DP:GQ:PL 1/1:0,19:19:57:722,57,0 chr1 153668189 . G A 1170.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.98;SOR=1.942 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1199,87,0 chr1 153669536 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 153670359 . G C 3572.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.03;SOR=1.522 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3601,315,0 chr1 153670433 . A G 2040.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.06;SOR=2.001 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2069,174,0 chr1 153673066 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 153673072 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 153674224 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 153683876 . T G 1448.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.845;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.82;ReadPosRankSum=-0.934;SOR=0.459 GT:AD:DP:GQ:PL 1/1:1,46:47:99:1477,130,0 chr1 153683929 . C G 1036.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.27;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1065,84,0 chr1 153686248 . C T 4881.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.001;ClippingRankSum=0.000;DP=364;ExcessHet=3.0103;FS=0.826;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=-0.900;SOR=0.629 GT:AD:DP:GQ:PL 0/1:189,173:362:99:4910,0,5137 chr1 153690141 . T A 333.73 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.34;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,11:11:33:371,33,0 chr1 153728900 . G C 1034.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1063,99,0 chr1 153739486 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 153747169 . T C 1387.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.998;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=11.281;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.33;ReadPosRankSum=0.325;SOR=1.814 GT:AD:DP:GQ:PL 0/1:38,47:85:99:1416,0,1032 chr1 153770841 . G A 1215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.431;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=2.893;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.82;ReadPosRankSum=-0.627;SOR=0.446 GT:AD:DP:GQ:PL 0/1:40,48:88:99:1244,0,1100 chr1 153779589 . A G 343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.440;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.46;ReadPosRankSum=-0.113;SOR=0.675 GT:AD:DP:GQ:PL 0/1:17,13:30:99:372,0,511 chr1 153779663 . T C 489.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.523;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.31;ReadPosRankSum=-0.531;SOR=0.763 GT:AD:DP:GQ:PL 0/1:17,15:32:99:518,0,589 chr1 153792923 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 153795703 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 153813706 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 153822221 . T C 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 153852732 . A G 537.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.61;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,16:16:48:566,48,0 chr1 154089379 . T G 3518.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.16;SOR=2.235 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3547,309,0 chr1 154099811 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 154103890 . T C 377.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.97;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:406,30,0 chr1 154118025 . C A 317.03 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=31.70;ReadPosRankSum=-0.253;SOR=3.258 GT:AD:DP:GQ:PL 0/1:1,9:10:12:345,0,12 chr1 154128303 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 154129043 . A C 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr1 154135763 . G A 472.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.542;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.298;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.53;ReadPosRankSum=-0.785;SOR=0.458 GT:AD:DP:GQ:PL 0/1:24,17:41:99:501,0,660 chr1 154135911 . G A 1882.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.46;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1911,174,0 chr1 154139691 . A C 253.78 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.72;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:282,24,0 chr1 154152591 . C T 210.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.56;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:239,18,0 chr1 154227067 . T C 899.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.95;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,25:25:75:928,75,0 chr1 154266807 . T A 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.20;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 154270639 . C T 354.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.34;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:30:383,30,0 chr1 154270981 . A T 3328.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.54;SOR=1.253 GT:AD:DP:GQ:PL 1/1:0,109:109:99:3357,327,0 chr1 154273036 . A G 870.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.72;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,24:24:72:899,72,0 chr1 154273441 . T C 5836.77 PASS AC=2;AF=1.00;AN=2;DP=164;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.56;SOR=0.905 GT:AD:DP:GQ:PL 1/1:0,164:164:99:5865,492,0 chr1 154312576 . G A 1785.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.39;QD=33.07;SOR=2.137 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1814,160,0 chr1 154312602 . T G 1015.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.99;QD=29.02;SOR=1.885 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1044,103,0 chr1 154312914 . A T 157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.148;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=1.905;MLEAC=1;MLEAF=0.500;MQ=46.64;MQRankSum=-2.768;QD=3.43;ReadPosRankSum=-0.406;SOR=0.293 GT:AD:DP:GQ:PL 0/1:38,8:46:99:186,0,1123 chr1 154313011 . A G 2355.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.112;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=8.937;MLEAC=1;MLEAF=0.500;MQ=48.57;MQRankSum=2.507;QD=15.40;ReadPosRankSum=-1.589;SOR=1.389 GT:AD:DP:GQ:PL 0/1:91,62:153:99:2384,0,4632 chr1 154313018 . C T 2352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.139;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=10.158;MLEAC=1;MLEAF=0.500;MQ=49.21;MQRankSum=2.230;QD=14.70;ReadPosRankSum=-0.801;SOR=1.443 GT:AD:DP:GQ:PL 0/1:96,64:160:99:2381,0,4636 chr1 154313046 . G A 1634.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.099;ClippingRankSum=0.000;DP=188;ExcessHet=3.0103;FS=3.420;MLEAC=1;MLEAF=0.500;MQ=52.65;MQRankSum=1.479;QD=8.70;ReadPosRankSum=2.053;SOR=0.983 GT:AD:DP:GQ:PL 0/1:112,76:188:99:1663,0,2960 chr1 154314139 . G A 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr1 154321199 . G A 3184.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.786;ClippingRankSum=0.000;DP=217;ExcessHet=3.0103;FS=1.725;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.68;ReadPosRankSum=-1.448;SOR=0.562 GT:AD:DP:GQ:PL 0/1:96,121:217:99:3213,0,2471 chr1 154321784 . T C 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.25;MQRankSum=0.241;QD=17.09;ReadPosRankSum=-0.847;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,140 chr1 154322180 . T C 5351.77 PASS AC=2;AF=1.00;AN=2;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.66;SOR=2.200 GT:AD:DP:GQ:PL 1/1:0,159:159:99:5380,478,0 chr1 154322329 . T C 239.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:268,24,0 chr1 154323116 . C T 5169.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.238;ClippingRankSum=0.000;DP=439;ExcessHet=3.0103;FS=2.474;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.78;ReadPosRankSum=1.544;SOR=0.880 GT:AD:DP:GQ:PL 0/1:236,203:439:99:5198,0,6503 chr1 154323600 . T C 931.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.718;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=6.357;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.91;ReadPosRankSum=0.073;SOR=1.705 GT:AD:DP:GQ:PL 0/1:37,30:67:99:960,0,1008 chr1 154325898 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 154328785 . C A 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=2.632;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.25;ReadPosRankSum=-0.449;SOR=1.981 GT:AD:DP:GQ:PL 0/1:6,5:11:99:174,0,218 chr1 154330350 . C T 1358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.234;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=0.619;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.12;ReadPosRankSum=-0.446;SOR=0.632 GT:AD:DP:GQ:PL 0/1:93,56:149:99:1387,0,2421 chr1 154331229 . C T 249.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.502;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.21;ReadPosRankSum=-0.502;SOR=0.627 GT:AD:DP:GQ:PL 0/1:5,8:13:99:278,0,170 chr1 154331500 . T C 2152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.005;ClippingRankSum=0.000;DP=188;ExcessHet=3.0103;FS=0.549;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.45;ReadPosRankSum=1.229;SOR=0.646 GT:AD:DP:GQ:PL 0/1:102,86:188:99:2181,0,2683 chr1 154332534 . A G 1158.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.74;SOR=3.477 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1187,93,0 chr1 154332714 . G C 2406.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.472;ClippingRankSum=0.000;DP=169;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.24;ReadPosRankSum=-0.587;SOR=0.688 GT:AD:DP:GQ:PL 0/1:79,90:169:99:2435,0,1910 chr1 154344805 . G A 2722.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.855;ClippingRankSum=0.000;DP=234;ExcessHet=3.0103;FS=3.701;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.64;ReadPosRankSum=-1.597;SOR=0.495 GT:AD:DP:GQ:PL 0/1:136,98:234:99:2751,0,3818 chr1 154345696 . A G 1482.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.384;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.04;ReadPosRankSum=0.660;SOR=0.656 GT:AD:DP:GQ:PL 0/1:35,52:87:99:1511,0,1084 chr1 154348596 . A G 5363.77 PASS AC=2;AF=1.00;AN=2;DP=149;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.72;SOR=1.562 GT:AD:DP:GQ:PL 1/1:0,148:148:99:5392,445,0 chr1 154355958 . C T 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=-0.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr1 154355988 . T C 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.842;SOR=0.859 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr1 154356022 . T A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 154378723 . G A 1511.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.347;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=6.783;MLEAC=1;MLEAF=0.500;MQ=59.69;MQRankSum=-1.951;QD=16.43;ReadPosRankSum=-0.767;SOR=1.261 GT:AD:DP:GQ:PL 0/1:39,53:92:99:1540,0,1045 chr1 154378771 . C G 1034.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.980;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=3.064;MLEAC=1;MLEAF=0.500;MQ=59.63;MQRankSum=-2.141;QD=13.98;ReadPosRankSum=0.639;SOR=0.967 GT:AD:DP:GQ:PL 0/1:39,35:74:99:1063,0,1066 chr1 154378801 . G T 804.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.314;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.60;MQRankSum=-2.249;QD=11.66;ReadPosRankSum=-0.103;SOR=0.779 GT:AD:DP:GQ:PL 0/1:38,31:69:99:833,0,1175 chr1 154378828 . A G 935.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.712;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=1.962;MLEAC=1;MLEAF=0.500;MQ=59.61;MQRankSum=-2.058;QD=13.18;ReadPosRankSum=-1.682;SOR=1.002 GT:AD:DP:GQ:PL 0/1:36,35:71:99:964,0,1050 chr1 154378847 . T C 892.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.062;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=3.261;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.94;ReadPosRankSum=0.197;SOR=0.746 GT:AD:DP:GQ:PL 0/1:38,31:69:99:921,0,1085 chr1 154379241 . C A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.189;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:95:107,0,95 chr1 154385202 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 154405422 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 154421820 . C T 92.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.31;ReadPosRankSum=0.090;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,6:9:99:121,0,108 chr1 154421821 . G A 35.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.97;ReadPosRankSum=-0.090;SOR=1.179 GT:AD:DP:GQ:PL 0/1:6,3:9:64:64,0,243 chr1 154421941 . T A 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=-1.834;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,4:6:31:115,0,31 chr1 154429203 . G A 3112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.609;ClippingRankSum=0.000;DP=212;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.68;ReadPosRankSum=2.123;SOR=0.655 GT:AD:DP:GQ:PL 0/1:100,112:212:99:3141,0,2764 chr1 154429496 . T C 2426.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.633;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.97;ReadPosRankSum=-0.903;SOR=0.702 GT:AD:DP:GQ:PL 0/1:58,94:152:99:2455,0,1468 chr1 154432582 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 154435864 . T C 409.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.822;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=2.881;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.63;ReadPosRankSum=0.597;SOR=0.208 GT:AD:DP:GQ:PL 0/1:8,14:22:99:438,0,268 chr1 154454471 . T A 77.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.121;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.53;ReadPosRankSum=0.702;SOR=0.846 GT:AD:DP:GQ:PL 0/1:16,6:22:99:106,0,510 chr1 154464444 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 154464916 . C T 331.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.160;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.46;ReadPosRankSum=-0.148;SOR=0.793 GT:AD:DP:GQ:PL 0/1:9,10:19:99:360,0,287 chr1 154465420 . T C 1183.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.869;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=2.167;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.61;ReadPosRankSum=1.873;SOR=0.413 GT:AD:DP:GQ:PL 0/1:38,43:81:99:1212,0,1102 chr1 154465608 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 154470129 . C G 259.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.232;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=6.990;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.32;ReadPosRankSum=-0.933;SOR=3.056 GT:AD:DP:GQ:PL 0/1:7,8:15:99:288,0,179 chr1 154486456 . A G 453.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.41;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,14:14:42:482,42,0 chr1 154486721 . C G 2767.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.18;SOR=1.259 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2796,258,0 chr1 154489028 . C G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.842;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 154498895 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 154501250 . G A 2351.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.08;SOR=2.269 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2380,207,0 chr1 154501655 . C G 1237.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.820;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=0.687;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.90;ReadPosRankSum=0.589;SOR=0.606 GT:AD:DP:GQ:PL 0/1:72,53:125:99:1266,0,1877 chr1 154502081 . T C 458.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.49;ReadPosRankSum=0.000;SOR=1.863 GT:AD:DP:GQ:PL 0/1:5,13:18:99:487,0,154 chr1 154508682 . T C 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 154520057 . A G 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=-0.842;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr1 154521245 . T C 1229.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.24;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1258,111,0 chr1 154532226 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 154532367 . T C 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 154541727 . C G 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=0.765;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,136 chr1 154541862 . A T 973.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.225;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=2.481;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.08;ReadPosRankSum=-0.898;SOR=1.236 GT:AD:DP:GQ:PL 0/1:24,33:57:99:1002,0,695 chr1 154542717 . C T 1998.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.172;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=4.581;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.04;ReadPosRankSum=-1.041;SOR=1.050 GT:AD:DP:GQ:PL 0/1:86,80:166:99:2027,0,2242 chr1 154544095 . T C 5308.77 PASS AC=2;AF=1.00;AN=2;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=1.001 GT:AD:DP:GQ:PL 1/1:0,139:139:99:5337,418,0 chr1 154544102 . G A 1825.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.249;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=4.188;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.73;ReadPosRankSum=0.206;SOR=1.072 GT:AD:DP:GQ:PL 0/1:66,67:133:99:1854,0,1812 chr1 154544741 . T C 1413.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.011;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=2.057;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.36;ReadPosRankSum=0.554;SOR=0.432 GT:AD:DP:GQ:PL 0/1:32,45:77:99:1442,0,901 chr1 154545028 . G A 1667.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.008;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=4.362;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.44;ReadPosRankSum=1.444;SOR=0.344 GT:AD:DP:GQ:PL 0/1:47,61:108:99:1696,0,1340 chr1 154550739 . C T 2368.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.48;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2397,183,0 chr1 154551086 . G T 1046.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.638;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=8.324;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.42;ReadPosRankSum=-1.153;SOR=0.168 GT:AD:DP:GQ:PL 0/1:37,41:78:99:1075,0,1206 chr1 154551112 . T G 1895.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.33;SOR=5.507 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1924,144,0 chr1 154554450 . C T 185.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.48;ReadPosRankSum=1.732;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:214,0,211 chr1 154555610 . T C 6406.77 PASS AC=2;AF=1.00;AN=2;DP=184;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.82;SOR=1.770 GT:AD:DP:GQ:PL 1/1:0,184:184:99:6435,553,0 chr1 154559434 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 154567992 . C T 571.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.929;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=6.103;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.34;ReadPosRankSum=-0.168;SOR=2.118 GT:AD:DP:GQ:PL 0/1:16,19:35:99:600,0,512 chr1 154572175 . G T 693.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.657;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=0.376;SOR=0.793 GT:AD:DP:GQ:PL 0/1:27,26:53:99:722,0,798 chr1 154572988 . C T 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr1 154581729 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.74;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 154581743 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.44;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 154586560 . G C 490.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.08;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:519,39,0 chr1 154588785 . G C 2078.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.70;SOR=1.163 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2107,209,0 chr1 154589185 . C G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.93;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 154590149 . G C 454.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.42;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:47:483,47,0 chr1 154601491 . T C 5431.77 PASS AC=2;AF=1.00;AN=2;DP=162;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=0.879 GT:AD:DP:GQ:PL 1/1:0,162:162:99:5460,486,0 chr1 154602344 . T C 10956.77 PASS AC=2;AF=1.00;AN=2;DP=330;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.20;SOR=0.891 GT:AD:DP:GQ:PL 1/1:0,330:330:99:10985,990,0 chr1 154602564 . C T 7720.77 PASS AC=2;AF=1.00;AN=2;DP=240;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.17;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,240:240:99:7749,721,0 chr1 154602860 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 154607982 . C A 12704.77 PASS AC=2;AF=1.00;AN=2;DP=392;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.49;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,391:391:99:12733,1174,0 chr1 154627896 . A G 981.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.27;SOR=1.209 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1010,108,0 chr1 154657859 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 154670906 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 154670973 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 154671226 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.18;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 154678122 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 154715165 . C T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 154726341 . C A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 154746262 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 154772376 . A G 9815.77 PASS AC=2;AF=1.00;AN=2;DP=285;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.44;SOR=1.601 GT:AD:DP:GQ:PL 1/1:0,285:285:99:9844,856,0 chr1 154820349 . A T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 154820381 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 154822368 . G A 675.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.451;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.30;ReadPosRankSum=-0.214;SOR=1.460 GT:AD:DP:GQ:PL 0/1:10,19:29:99:704,0,318 chr1 154822421 . G A 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=1.383;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,135 chr1 154822761 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.11;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 154822762 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.17;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 154822801 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 154850545 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 154859828 . T C 9883.77 PASS AC=2;AF=1.00;AN=2;DP=228;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.57;SOR=1.353 GT:AD:DP:GQ:PL 1/1:0,227:227:99:9912,689,0 chr1 154859846 . A C 9064.77 PASS AC=2;AF=1.00;AN=2;DP=204;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.45;SOR=1.419 GT:AD:DP:GQ:PL 1/1:0,203:203:99:9093,628,0 chr1 154862220 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 154862435 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 154865320 . T C 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr1 154890097 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 154906400 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 154906402 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 154911666 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 154936792 . A G 1430.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.96;SOR=7.168 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1459,105,0 chr1 154945225 . A G 5531.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.956;ClippingRankSum=0.000;DP=169;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.73;ReadPosRankSum=-0.319;SOR=0.522 GT:AD:DP:GQ:PL 1/1:1,168:169:99:5560,465,0 chr1 154946604 . C T 4294.77 PASS AC=2;AF=1.00;AN=2;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.54;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,132:132:99:4323,396,0 chr1 154947089 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 154969117 . C G 924.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.03;SOR=1.382 GT:AD:DP:GQ:PL 1/1:0,28:28:84:953,84,0 chr1 154997170 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 155011063 . C T 667.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.311;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.90;ReadPosRankSum=-1.603;SOR=0.804 GT:AD:DP:GQ:PL 0/1:18,24:42:99:696,0,511 chr1 155011887 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 155015050 . C T 4322.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.358;ClippingRankSum=0.000;DP=326;ExcessHet=3.0103;FS=1.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=1.461;SOR=0.793 GT:AD:DP:GQ:PL 0/1:161,165:326:99:4351,0,4239 chr1 155016481 . A G 3958.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.051;ClippingRankSum=0.000;DP=285;ExcessHet=3.0103;FS=0.458;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.94;ReadPosRankSum=-0.531;SOR=0.736 GT:AD:DP:GQ:PL 0/1:146,138:284:99:3987,0,4239 chr1 155020609 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 155023027 . G A 650.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.731;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=5.765;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=0.014;SOR=0.245 GT:AD:DP:GQ:PL 0/1:27,24:51:99:679,0,736 chr1 155029453 . T C 1135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.298;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=2.647;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.33;ReadPosRankSum=-0.949;SOR=1.040 GT:AD:DP:GQ:PL 0/1:65,45:110:99:1164,0,1740 chr1 155030029 . G C 976.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.194;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=1.172;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.95;ReadPosRankSum=0.715;SOR=0.485 GT:AD:DP:GQ:PL 0/1:36,34:70:99:1005,0,1142 chr1 155033615 . A G 4765.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.306;ClippingRankSum=0.000;DP=392;ExcessHet=3.0103;FS=1.183;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.19;ReadPosRankSum=0.768;SOR=0.730 GT:AD:DP:GQ:PL 0/1:206,185:391:99:4794,0,5518 chr1 155033974 . C A 1126.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.779;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=4.108;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.54;ReadPosRankSum=-0.236;SOR=0.313 GT:AD:DP:GQ:PL 0/1:21,29:50:99:1155,0,1233 chr1 155033975 . C G 1126.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.779;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=4.108;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.54;ReadPosRankSum=-0.236;SOR=0.313 GT:AD:DP:GQ:PL 0/1:21,29:50:99:1155,0,1233 chr1 155034523 . C T 2082.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.029;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.26;ReadPosRankSum=-0.586;SOR=0.715 GT:AD:DP:GQ:PL 0/1:107,78:185:99:2111,0,2818 chr1 155034817 . C T 1028.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.139;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=9.523;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.17;ReadPosRankSum=1.264;SOR=0.078 GT:AD:DP:GQ:PL 0/1:23,28:51:99:1057,0,1580 chr1 155034826 . C A 960.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.059;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=6.887;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.34;ReadPosRankSum=0.906;SOR=0.116 GT:AD:DP:GQ:PL 0/1:19,24:43:99:989,0,1440 chr1 155041950 . G A 1130.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.102;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=7.422;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.96;ReadPosRankSum=-1.920;SOR=0.101 GT:AD:DP:GQ:PL 0/1:43,38:81:99:1159,0,1509 chr1 155044909 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 155047234 . A C 2116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.232;ClippingRankSum=0.000;DP=223;ExcessHet=3.0103;FS=1.053;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.53;ReadPosRankSum=1.014;SOR=0.613 GT:AD:DP:GQ:PL 0/1:133,89:222:99:2145,0,3576 chr1 155048360 . C T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 155052885 . T C 259.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.32;ReadPosRankSum=-0.417;SOR=0.818 GT:AD:DP:GQ:PL 0/1:7,8:15:99:288,0,247 chr1 155053638 . C T 634.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.535;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.43;ReadPosRankSum=-0.605;SOR=0.844 GT:AD:DP:GQ:PL 0/1:24,20:44:99:663,0,825 chr1 155054466 . A C 4020.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.51;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,120:120:99:4049,360,0 chr1 155056046 . G A 4335.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.012;ClippingRankSum=0.000;DP=365;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.94;ReadPosRankSum=-0.145;SOR=0.691 GT:AD:DP:GQ:PL 0/1:188,175:363:99:4364,0,4877 chr1 155058081 . A C 5837.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.148;ClippingRankSum=0.000;DP=478;ExcessHet=3.0103;FS=1.744;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.21;ReadPosRankSum=0.595;SOR=0.837 GT:AD:DP:GQ:PL 0/1:258,220:478:99:5866,0,7129 chr1 155058900 . C T 2712.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.176;ClippingRankSum=0.000;DP=194;ExcessHet=3.0103;FS=5.413;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.98;ReadPosRankSum=-1.493;SOR=1.099 GT:AD:DP:GQ:PL 0/1:99,95:194:99:2741,0,2873 chr1 155060841 . T C 6821.77 PASS AC=2;AF=1.00;AN=2;DP=206;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.12;SOR=1.390 GT:AD:DP:GQ:PL 1/1:0,206:206:99:6850,618,0 chr1 155061096 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.84;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 155075243 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 155085023 . A G 866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.731;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=5.762;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.524;SOR=1.488 GT:AD:DP:GQ:PL 0/1:37,29:66:99:895,0,1068 chr1 155127789 . A G 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=0.180;SOR=1.981 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr1 155133406 . T G 1952.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.956;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=4.378;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.38;ReadPosRankSum=0.592;SOR=1.101 GT:AD:DP:GQ:PL 0/1:79,67:146:99:1981,0,2316 chr1 155133578 . A G 3846.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.538;ClippingRankSum=0.000;DP=316;ExcessHet=3.0103;FS=3.667;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.21;ReadPosRankSum=0.352;SOR=0.906 GT:AD:DP:GQ:PL 0/1:162,153:315:99:3875,0,4270 chr1 155133751 . A T 3255.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.057;ClippingRankSum=0.000;DP=237;ExcessHet=3.0103;FS=6.180;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.80;ReadPosRankSum=0.520;SOR=0.840 GT:AD:DP:GQ:PL 0/1:115,121:236:99:3284,0,3220 chr1 155134074 . A G 3061.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.504;ClippingRankSum=0.000;DP=226;ExcessHet=3.0103;FS=0.493;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.61;ReadPosRankSum=1.092;SOR=0.766 GT:AD:DP:GQ:PL 0/1:109,116:225:99:3090,0,3172 chr1 155134221 . G A 924.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.227;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=2.030;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.42;ReadPosRankSum=-0.417;SOR=0.469 GT:AD:DP:GQ:PL 0/1:46,35:81:99:953,0,1371 chr1 155135811 . G A 969.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.989;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=1.019;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.72;ReadPosRankSum=-0.897;SOR=0.511 GT:AD:DP:GQ:PL 0/1:25,33:58:99:998,0,768 chr1 155140628 . G T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 155150307 . G A 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr1 155157086 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 155169734 . A G 1961.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.897;ClippingRankSum=0.000;DP=154;ExcessHet=3.0103;FS=2.864;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.82;ReadPosRankSum=-0.843;SOR=0.818 GT:AD:DP:GQ:PL 0/1:83,70:153:99:1990,0,2371 chr1 155169753 . G A 2287.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.467;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=2.782;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=-0.577;SOR=0.749 GT:AD:DP:GQ:PL 0/1:82,77:159:99:2316,0,2232 chr1 155176305 . G A 439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.049;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.99;ReadPosRankSum=-0.144;SOR=0.465 GT:AD:DP:GQ:PL 0/1:28,16:44:99:468,0,923 chr1 155177242 . G A 4985.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.884;ClippingRankSum=0.000;DP=436;ExcessHet=3.0103;FS=1.116;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.46;ReadPosRankSum=-0.654;SOR=0.819 GT:AD:DP:GQ:PL 0/1:230,205:435:99:5014,0,6197 chr1 155179017 . C T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=1.068;SOR=0.916 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,112 chr1 155182252 . A T 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.019;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=41.720;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.99;ReadPosRankSum=3.221;SOR=4.970 GT:AD:DP:GQ:PL 0/1:12,11:23:99:120,0,429 chr1 155188465 . C T 2181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.675;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=3.123;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=-1.131;SOR=0.449 GT:AD:DP:GQ:PL 0/1:102,82:184:99:2210,0,2988 chr1 155192276 . C T 2860.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.898;ClippingRankSum=0.000;DP=202;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.16;ReadPosRankSum=-0.306;SOR=0.708 GT:AD:DP:GQ:PL 0/1:93,109:202:99:2889,0,2470 chr1 155202588 . A G 32.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.903;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.28;ReadPosRankSum=-0.210;SOR=0.169 GT:AD:DP:GQ:PL 0/1:7,3:10:61:61,0,226 chr1 155206101 . G A 726.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.331;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.30;ReadPosRankSum=-1.515;SOR=0.242 GT:AD:DP:GQ:PL 0/1:20,22:42:99:755,0,705 chr1 155208991 . T A 2346.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.275;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.39;ReadPosRankSum=0.138;SOR=0.682 GT:AD:DP:GQ:PL 0/1:115,91:206:99:2375,0,2999 chr1 155212052 . G T 1248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.144;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.56;MQRankSum=0.738;QD=12.74;ReadPosRankSum=1.346;SOR=0.740 GT:AD:DP:GQ:PL 0/1:56,42:98:99:1277,0,1601 chr1 155212373 . C T 4663.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.227;ClippingRankSum=0.000;DP=396;ExcessHet=3.0103;FS=3.862;MLEAC=1;MLEAF=0.500;MQ=57.20;MQRankSum=0.513;QD=11.87;ReadPosRankSum=0.928;SOR=0.880 GT:AD:DP:GQ:PL 0/1:217,176:393:99:4692,0,6173 chr1 155214590 . C G 11400.77 PASS AC=2;AF=1.00;AN=2;DP=375;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.18;QD=30.40;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,375:375:99:11429,1126,0 chr1 155215184 . G A 4901.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.418;ClippingRankSum=0.000;DP=348;ExcessHet=3.0103;FS=2.869;MLEAC=1;MLEAF=0.500;MQ=56.53;MQRankSum=-7.496;QD=14.09;ReadPosRankSum=1.759;SOR=0.866 GT:AD:DP:GQ:PL 0/1:165,183:348:99:4930,0,4672 chr1 155216938 . C T 1763.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.080;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=5.481;MLEAC=1;MLEAF=0.500;MQ=59.44;MQRankSum=-1.466;QD=13.57;ReadPosRankSum=-0.691;SOR=0.373 GT:AD:DP:GQ:PL 0/1:59,71:130:99:1792,0,1544 chr1 155216951 . G A 1403.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.159;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=1.518;MLEAC=1;MLEAF=0.500;MQ=58.91;MQRankSum=1.889;QD=11.32;ReadPosRankSum=-0.730;SOR=0.905 GT:AD:DP:GQ:PL 0/1:68,56:124:99:1432,0,1833 chr1 155225189 . T C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.524;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 155235878 . G T 16142.77 PASS AC=2;AF=1.00;AN=2;DP=460;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.82;QD=29.10;SOR=1.222 GT:AD:DP:GQ:PL 1/1:0,459:459:99:16171,1378,0 chr1 155238856 . T C 1978.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.13;QD=28.77;SOR=6.518 GT:AD:DP:GQ:PL 1/1:0,52:52:99:2007,156,0 chr1 155317797 . C T 301.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.82;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:330,24,0 chr1 155324483 . A G 1122.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.14;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1151,90,0 chr1 155324981 . A G 3772.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.43;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3801,316,0 chr1 155343256 . T C 1808.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.89;SOR=2.345 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1837,165,0 chr1 155438844 . T C 5136.77 PASS AC=2;AF=1.00;AN=2;DP=156;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.93;SOR=0.800 GT:AD:DP:GQ:PL 1/1:0,156:156:99:5165,467,0 chr1 155562525 . T C 4022.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.63;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,88:88:99:4051,274,0 chr1 155562534 . T C 4115.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.07;SOR=0.959 GT:AD:DP:GQ:PL 1/1:0,91:91:99:4144,280,0 chr1 155562541 . T C 4018.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.33;SOR=1.030 GT:AD:DP:GQ:PL 1/1:0,87:87:99:4047,271,0 chr1 155562550 . T C 3989.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.45;SOR=1.014 GT:AD:DP:GQ:PL 1/1:0,91:91:99:4018,274,0 chr1 155587025 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 155635944 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 155646323 . C T 422.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.26;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:451,36,0 chr1 155752715 . C G 1118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.719;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=1.154;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.34;ReadPosRankSum=1.248;SOR=0.495 GT:AD:DP:GQ:PL 0/1:40,38:78:99:1147,0,1328 chr1 155767594 . C T 1473.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.89;QD=32.04;SOR=1.203 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1502,138,0 chr1 155783885 . A G 1144.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.71;SOR=1.483 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1173,105,0 chr1 155784326 . G A 1453.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.59;SOR=2.419 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1482,120,0 chr1 155785306 . G A 3117.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.69;SOR=1.458 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3146,312,0 chr1 155785448 . T C 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.28;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr1 155794099 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 155797184 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 155802845 . A G 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 155804808 . T C 418.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.00;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:447,33,0 chr1 155813972 . C T 898.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.99;SOR=1.688 GT:AD:DP:GQ:PL 1/1:0,29:29:87:927,87,0 chr1 155814581 . G A 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 155845853 . C G 385.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.55;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,14:14:42:414,42,0 chr1 155853180 . C T 1555.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1584,120,0 chr1 155853211 . T C 2280.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.61;SOR=4.840 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2309,177,0 chr1 155859349 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 155859569 . C A 2149.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.95;SOR=4.332 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2178,168,0 chr1 155868074 . G C 4699.77 PASS AC=2;AF=1.00;AN=2;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.33;SOR=1.187 GT:AD:DP:GQ:PL 1/1:0,141:141:99:4728,423,0 chr1 155868476 . T C 10574.77 PASS AC=2;AF=1.00;AN=2;DP=310;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.22;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,309:309:99:10603,928,0 chr1 155869005 . T C 514.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.31;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr1 155880767 . T C 1473.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.67;SOR=3.312 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1502,123,0 chr1 155881020 . G A 649.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.53;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:678,51,0 chr1 155900625 . G A 5322.77 PASS AC=2;AF=1.00;AN=2;DP=162;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.27;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,160:160:99:5351,479,0 chr1 155904169 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 155910782 . C G 6132.77 PASS AC=2;AF=1.00;AN=2;DP=183;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.51;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,183:183:99:6161,550,0 chr1 155911161 . G A 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 155921254 . A C 1470.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.63;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1499,120,0 chr1 155925364 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 155929229 . A T 1956.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.06;SOR=1.573 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1985,188,0 chr1 155933519 . T C 582.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.28;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:50:611,50,0 chr1 155933617 . C T 2374.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=1.739 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2403,222,0 chr1 155934386 . T C 6580.77 PASS AC=2;AF=1.00;AN=2;DP=223;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.51;SOR=1.008 GT:AD:DP:GQ:PL 1/1:0,223:223:99:6609,668,0 chr1 155934601 . G A 1198.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=6.869 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1227,90,0 chr1 155939119 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 155939139 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 155942695 . T C 9079.77 PASS AC=2;AF=1.00;AN=2;DP=290;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.75;SOR=1.048 GT:AD:DP:GQ:PL 1/1:0,286:286:99:9108,858,0 chr1 155948089 . T A 13485.77 PASS AC=2;AF=1.00;AN=2;DP=417;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.95;QD=32.42;SOR=1.386 GT:AD:DP:GQ:PL 1/1:0,416:416:99:13514,1248,0 chr1 155954631 . A T 48.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.12;QD=24.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:76,6,0 chr1 155954714 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.10;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 155958441 . T C 2104.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.45;SOR=1.848 GT:AD:DP:GQ:PL 1/1:0,51:51:99:2133,153,0 chr1 155958451 . C T 1938.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.84;SOR=2.247 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1967,135,0 chr1 155961475 . T C 598.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.05;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:627,45,0 chr1 155961577 . G A 1827.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.85;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1856,162,0 chr1 155992556 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 156011698 . C G 986.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.486;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=2.120;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.71;ReadPosRankSum=-0.987;SOR=1.115 GT:AD:DP:GQ:PL 0/1:36,36:72:99:1015,0,886 chr1 156036222 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 156037386 . A G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 156041653 . T C 974.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.293;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.71;MQRankSum=0.021;QD=14.55;ReadPosRankSum=0.609;SOR=0.746 GT:AD:DP:GQ:PL 0/1:33,34:67:99:1003,0,777 chr1 156046196 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 156046244 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 156052100 . C T 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.72;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 156068267 . C A 4076.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.153;ClippingRankSum=0.000;DP=347;ExcessHet=3.0103;FS=14.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.78;ReadPosRankSum=-1.669;SOR=0.317 GT:AD:DP:GQ:PL 0/1:182,164:346:99:4105,0,5212 chr1 156070519 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 156115584 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 156137743 . C T 872.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.707;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.55;ReadPosRankSum=-0.847;SOR=0.693 GT:AD:DP:GQ:PL 0/1:30,30:60:99:901,0,856 chr1 156161826 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 156162029 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 156163247 . T C 2996.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.57;SOR=1.095 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3025,276,0 chr1 156173466 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 156176427 . C T 4106.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.85;SOR=2.138 GT:AD:DP:GQ:PL 1/1:0,125:125:99:4135,375,0 chr1 156180397 . C G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 156244130 . C T 3395.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.263;ClippingRankSum=0.000;DP=225;ExcessHet=3.0103;FS=6.582;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.09;ReadPosRankSum=0.029;SOR=1.114 GT:AD:DP:GQ:PL 0/1:109,116:225:99:3424,0,3025 chr1 156246108 . G A 6567.77 PASS AC=2;AF=1.00;AN=2;DP=198;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.17;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,198:198:99:6596,594,0 chr1 156249659 . A G 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.52;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 156250265 . T C 3893.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.45;SOR=1.649 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3922,360,0 chr1 156253265 . G A 594.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.833;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=6.235;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.49;ReadPosRankSum=1.232;SOR=0.068 GT:AD:DP:GQ:PL 0/1:15,19:34:99:623,0,524 chr1 156258753 . G A 182.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.22;QD=30.47;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:211,18,0 chr1 156259789 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 156260211 . G A 719.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.53;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,18:18:54:748,54,0 chr1 156260350 . T A 2934.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.77;SOR=1.554 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2963,249,0 chr1 156260415 . C A 4704.77 PASS AC=2;AF=1.00;AN=2;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.67;SOR=1.318 GT:AD:DP:GQ:PL 1/1:0,144:144:99:4733,432,0 chr1 156260814 . C G 1313.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.69;SOR=2.133 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1342,117,0 chr1 156261145 . A G 1023.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.43;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1052,78,0 chr1 156261475 . G C 8131.77 PASS AC=2;AF=1.00;AN=2;DP=250;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.66;SOR=1.572 GT:AD:DP:GQ:PL 1/1:0,249:249:99:8160,746,0 chr1 156261693 . G A 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 156262340 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 156262407 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 156263688 . T C 2854.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.19;SOR=2.531 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2883,257,0 chr1 156266883 . T C 837.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.79;SOR=4.712 GT:AD:DP:GQ:PL 1/1:0,21:21:63:866,63,0 chr1 156268688 . C T 134.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:162,12,0 chr1 156276937 . T G 1390.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.77;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1419,102,0 chr1 156286042 . G C 1695.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.09;SOR=3.033 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1724,141,0 chr1 156290761 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 156291700 . G C 4523.77 PASS AC=2;AF=1.00;AN=2;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.51;SOR=1.929 GT:AD:DP:GQ:PL 1/1:0,135:135:99:4552,405,0 chr1 156298539 . C G 301.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.33;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:330,24,0 chr1 156312433 . A G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.31;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 156317612 . T C 1165.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.51;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1194,111,0 chr1 156320865 . T C 852.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.01;ReadPosRankSum=0.625;SOR=0.744 GT:AD:DP:GQ:PL 0/1:38,33:71:99:881,0,987 chr1 156330319 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 156334559 . A G 77.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.64;ReadPosRankSum=0.847;SOR=0.105 GT:AD:DP:GQ:PL 0/1:5,4:9:99:106,0,182 chr1 156334991 . A G 1263.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1292,114,0 chr1 156344313 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 156344836 . A G 221.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.64;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:250,18,0 chr1 156375715 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 156375719 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 156378043 . T A 728.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.918;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.887;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.98;ReadPosRankSum=1.041;SOR=0.824 GT:AD:DP:GQ:PL 0/1:42,31:73:99:757,0,1197 chr1 156381908 . G A 2476.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.311;ClippingRankSum=0.000;DP=199;ExcessHet=3.0103;FS=3.211;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.45;ReadPosRankSum=-0.496;SOR=0.499 GT:AD:DP:GQ:PL 0/1:100,99:199:99:2505,0,2547 chr1 156382001 . G A 2361.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.016;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=1.150;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=0.416;SOR=0.807 GT:AD:DP:GQ:PL 0/1:100,84:184:99:2390,0,2691 chr1 156382560 . G A 201.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.549;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=7.782;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.42;ReadPosRankSum=-0.035;SOR=1.414 GT:AD:DP:GQ:PL 0/1:2,7:9:56:230,0,56 chr1 156382605 . C T 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=5.229;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=-0.549;SOR=0.035 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,262 chr1 156382656 . G T 297.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.030;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=3.388;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.41;ReadPosRankSum=-1.812;SOR=0.144 GT:AD:DP:GQ:PL 0/1:13,11:24:99:326,0,427 chr1 156383079 . G A 307.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.530;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.38;ReadPosRankSum=0.888;SOR=1.352 GT:AD:DP:GQ:PL 0/1:13,10:23:99:336,0,437 chr1 156384179 . A G 198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.638;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=5.706;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.64;ReadPosRankSum=0.697;SOR=0.092 GT:AD:DP:GQ:PL 0/1:15,8:23:99:227,0,523 chr1 156384502 . A G 1827.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.795;ClippingRankSum=0.000;DP=177;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.33;ReadPosRankSum=0.109;SOR=0.680 GT:AD:DP:GQ:PL 0/1:100,77:177:99:1856,0,2661 chr1 156384575 . A G 3899.77 PASS AC=2;AF=1.00;AN=2;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.62;SOR=1.569 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3928,348,0 chr1 156385653 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 156385718 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 156390071 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 156393145 . G A 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr1 156397646 . G T 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr1 156399093 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 156401570 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 156402054 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 156404464 . C T 1676.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.111;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=1.291;SOR=0.639 GT:AD:DP:GQ:PL 0/1:69,59:128:99:1705,0,2036 chr1 156406888 . A G 785.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.75;SOR=4.712 GT:AD:DP:GQ:PL 1/1:0,21:21:63:814,63,0 chr1 156409392 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 156415159 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 156435518 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 156437061 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 156459576 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 156468406 . G A 348.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.746;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=2.843;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.58;ReadPosRankSum=0.247;SOR=1.234 GT:AD:DP:GQ:PL 0/1:30,16:46:99:377,0,898 chr1 156469208 . T C 1687.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.70;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1716,126,0 chr1 156480927 . G A 1069.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.154;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=4.460;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.08;ReadPosRankSum=-0.841;SOR=0.341 GT:AD:DP:GQ:PL 0/1:35,41:76:99:1098,0,980 chr1 156482301 . G A 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.019;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.38;ReadPosRankSum=-0.610;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,3:10:62:62,0,231 chr1 156482991 . A T 597.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.01;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,15:15:45:626,45,0 chr1 156490516 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 156526396 . A G 5276.77 PASS AC=2;AF=1.00;AN=2;DP=160;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=1.843 GT:AD:DP:GQ:PL 1/1:0,160:160:99:5305,480,0 chr1 156533199 . A G 1782.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.423;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=6.712;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.01;ReadPosRankSum=-0.454;SOR=0.195 GT:AD:DP:GQ:PL 0/1:46,53:99:99:1811,0,1552 chr1 156533749 . T C 1684.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.70;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1713,150,0 chr1 156539760 . C G 4461.77 PASS AC=2;AF=1.00;AN=2;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.05;SOR=0.973 GT:AD:DP:GQ:PL 1/1:0,135:135:99:4490,405,0 chr1 156550381 . T A 5034.77 PASS AC=2;AF=1.00;AN=2;DP=162;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.08;SOR=0.769 GT:AD:DP:GQ:PL 1/1:0,162:162:99:5063,486,0 chr1 156553925 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr1 156554429 . G T 1109.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.099;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=1.076;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.05;ReadPosRankSum=1.708;SOR=0.531 GT:AD:DP:GQ:PL 0/1:40,39:79:99:1138,0,1302 chr1 156554552 . T G 352.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.00;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:30:381,30,0 chr1 156556442 . C T 2871.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.19;SOR=2.247 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2900,252,0 chr1 156556595 . C G 2452.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.204;ClippingRankSum=0.000;DP=178;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.78;ReadPosRankSum=-1.030;SOR=0.691 GT:AD:DP:GQ:PL 0/1:81,97:178:99:2481,0,1962 chr1 156556638 . G A 1814.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.457;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=6.663;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.25;ReadPosRankSum=0.315;SOR=0.337 GT:AD:DP:GQ:PL 0/1:65,72:137:99:1843,0,1856 chr1 156556652 . T C 4622.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.05;SOR=1.549 GT:AD:DP:GQ:PL 1/1:0,115:115:99:4651,349,0 chr1 156556772 . C A 415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.767;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=2.114;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.32;ReadPosRankSum=-0.314;SOR=0.307 GT:AD:DP:GQ:PL 0/1:10,14:24:99:444,0,346 chr1 156560619 . C T 346.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.39;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:375,27,0 chr1 156561682 . A G 1343.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.77;SOR=1.845 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1372,123,0 chr1 156562079 . A G 3478.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.13;SOR=1.796 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3507,315,0 chr1 156562415 . T C 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.46;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 156562458 . T C 912.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.64;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:63:941,63,0 chr1 156562460 . C T 912.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.91;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:941,63,0 chr1 156562552 . T G 982.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.773;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=0.833;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.73;ReadPosRankSum=0.451;SOR=0.886 GT:AD:DP:GQ:PL 0/1:63,38:101:99:1011,0,1677 chr1 156562941 . T C 90.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.722;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=3.468;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.67;ReadPosRankSum=1.354;SOR=0.105 GT:AD:DP:GQ:PL 0/1:12,4:16:99:119,0,421 chr1 156563116 . C A 1389.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.551;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=2.128;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.65;ReadPosRankSum=-0.628;SOR=0.892 GT:AD:DP:GQ:PL 0/1:85,59:144:99:1418,0,2462 chr1 156563185 . T C 4895.77 PASS AC=2;AF=1.00;AN=2;DP=153;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.00;SOR=1.106 GT:AD:DP:GQ:PL 1/1:0,153:153:99:4924,459,0 chr1 156564733 . A C 1177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.460;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=12.576;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.92;ReadPosRankSum=0.654;SOR=0.081 GT:AD:DP:GQ:PL 0/1:34,40:74:99:1206,0,1137 chr1 156564747 . G A 1067.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.957;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=14.371;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.41;ReadPosRankSum=-0.170;SOR=0.027 GT:AD:DP:GQ:PL 0/1:24,34:58:99:1096,0,811 chr1 156566331 . T C 1896.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.58;SOR=4.021 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1925,129,0 chr1 156566341 . A G 2096.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.37;SOR=3.398 GT:AD:DP:GQ:PL 1/1:0,49:49:99:2125,147,0 chr1 156566429 . G C 4445.77 PASS AC=2;AF=1.00;AN=2;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.68;SOR=1.816 GT:AD:DP:GQ:PL 1/1:0,132:132:99:4474,396,0 chr1 156566459 . T C 6634.77 PASS AC=2;AF=1.00;AN=2;DP=177;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.70;SOR=1.218 GT:AD:DP:GQ:PL 1/1:0,176:176:99:6663,529,0 chr1 156566465 . G A 2144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.083;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=-0.202;SOR=0.685 GT:AD:DP:GQ:PL 0/1:94,84:178:99:2173,0,2506 chr1 156566561 . A G 6427.77 PASS AC=2;AF=1.00;AN=2;DP=208;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.90;SOR=1.234 GT:AD:DP:GQ:PL 1/1:0,208:208:99:6456,624,0 chr1 156566688 . T C 1717.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.28;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1746,141,0 chr1 156566775 . G A 451.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.75;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:480,39,0 chr1 156569181 . A G 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 156569362 . T C 5547.77 PASS AC=2;AF=1.00;AN=2;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.63;SOR=1.988 GT:AD:DP:GQ:PL 1/1:0,170:170:99:5576,509,0 chr1 156582056 . A G 915.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.038;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=2.297;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=-0.915;SOR=1.078 GT:AD:DP:GQ:PL 0/1:47,32:79:99:944,0,1490 chr1 156582128 . C G 1340.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.005;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=5.153;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.01;ReadPosRankSum=-1.462;SOR=0.714 GT:AD:DP:GQ:PL 0/1:22,45:67:99:1369,0,615 chr1 156582928 . T G 955.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.16;SOR=3.098 GT:AD:DP:GQ:PL 1/1:0,26:26:78:984,78,0 chr1 156583970 . A C 580.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.23;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,15:15:45:609,45,0 chr1 156585408 . G A 537.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.72;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:566,42,0 chr1 156586529 . G A 4843.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-1.041;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.08;ReadPosRankSum=1.810;SOR=0.354 GT:AD:DP:GQ:PL 1/1:1,150:151:99:4872,417,0 chr1 156586814 . A G 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.41;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 156590932 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 156591622 . T C 1009.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.60;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1038,99,0 chr1 156591859 . G C 2999.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.98;SOR=1.824 GT:AD:DP:GQ:PL 1/1:0,80:80:99:3028,241,0 chr1 156592216 . G A 3643.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.13;SOR=1.907 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3672,330,0 chr1 156592351 . G A 1864.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.10;SOR=1.702 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1893,153,0 chr1 156593233 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.17;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 156593583 . G A 10924.77 PASS AC=2;AF=1.00;AN=2;DP=333;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.81;SOR=1.145 GT:AD:DP:GQ:PL 1/1:0,333:333:99:10953,999,0 chr1 156593934 . A C 5632.77 PASS AC=2;AF=1.00;AN=2;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.94;SOR=1.398 GT:AD:DP:GQ:PL 1/1:0,171:171:99:5661,513,0 chr1 156594021 . G A 3598.77 PASS AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.60;SOR=1.632 GT:AD:DP:GQ:PL 1/1:0,104:104:99:3627,312,0 chr1 156594060 . C T 2444.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.04;SOR=1.842 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2473,221,0 chr1 156594106 . T C 1296.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.42;SOR=1.788 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1325,120,0 chr1 156594200 . C G 426.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.38;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:455,33,0 chr1 156594848 . G A 780.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.87;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,21:21:63:809,63,0 chr1 156595130 . C T 2146.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.03;SOR=0.854 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2175,195,0 chr1 156596404 . C A 1585.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.790;ClippingRankSum=0.000;DP=143;ExcessHet=3.0103;FS=5.007;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.09;ReadPosRankSum=-0.350;SOR=0.658 GT:AD:DP:GQ:PL 0/1:81,62:143:99:1614,0,2035 chr1 156597704 . C T 1802.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.01;SOR=2.628 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1831,159,0 chr1 156608539 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 156624864 . C A 496.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.060;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=3.740;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=0.228;SOR=0.190 GT:AD:DP:GQ:PL 0/1:16,21:37:99:525,0,477 chr1 156625655 . G A 400.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.40;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,12:12:36:429,36,0 chr1 156641460 . T G 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr1 156648176 . G A 2371.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.132;ClippingRankSum=0.000;DP=205;ExcessHet=3.0103;FS=5.740;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.57;ReadPosRankSum=-0.811;SOR=0.393 GT:AD:DP:GQ:PL 0/1:118,87:205:99:2400,0,3476 chr1 156648976 . T G 1501.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.91;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1530,120,0 chr1 156649569 . A T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 156652460 . G A 6314.77 PASS AC=2;AF=1.00;AN=2;DP=191;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.06;SOR=1.477 GT:AD:DP:GQ:PL 1/1:0,191:191:99:6343,573,0 chr1 156656566 . C A 1095.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.18;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1124,93,0 chr1 156657128 . T C 9954.77 PASS AC=2;AF=1.00;AN=2;DP=312;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.91;SOR=1.579 GT:AD:DP:GQ:PL 1/1:0,312:312:99:9983,936,0 chr1 156658204 . T C 5503.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.017;ClippingRankSum=0.000;DP=433;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.71;ReadPosRankSum=-0.655;SOR=0.685 GT:AD:DP:GQ:PL 0/1:226,207:433:99:5532,0,6171 chr1 156658460 . G A 1889.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.745;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.935;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.48;ReadPosRankSum=-0.841;SOR=0.878 GT:AD:DP:GQ:PL 0/1:43,54:97:99:1918,0,1423 chr1 156658925 . C A 4326.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.24;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,120:120:99:4355,361,0 chr1 156659245 . A G 2159.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.30;SOR=1.385 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2188,207,0 chr1 156669208 . A G 892.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.035;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.53;ReadPosRankSum=1.003;SOR=0.857 GT:AD:DP:GQ:PL 0/1:24,30:54:99:921,0,638 chr1 156669844 . G A 2481.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.235;ClippingRankSum=0.000;DP=202;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.29;ReadPosRankSum=0.980;SOR=0.710 GT:AD:DP:GQ:PL 0/1:107,95:202:99:2510,0,2946 chr1 156669961 . G A 1418.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.459;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=0.709;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.14;ReadPosRankSum=-1.779;SOR=0.776 GT:AD:DP:GQ:PL 0/1:56,52:108:99:1447,0,1706 chr1 156670364 . G A 1044.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.219;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.74;ReadPosRankSum=1.018;SOR=0.663 GT:AD:DP:GQ:PL 0/1:52,37:89:99:1073,0,1577 chr1 156670516 . C T 3290.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.037;ClippingRankSum=0.000;DP=297;ExcessHet=3.0103;FS=0.426;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.12;ReadPosRankSum=0.667;SOR=0.648 GT:AD:DP:GQ:PL 0/1:159,137:296:99:3319,0,4189 chr1 156670711 . C T 1838.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.812;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=12.920;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.119;SOR=0.213 GT:AD:DP:GQ:PL 0/1:71,69:140:99:1867,0,2213 chr1 156670886 . G A 598.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.655;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.51;ReadPosRankSum=-0.223;SOR=0.788 GT:AD:DP:GQ:PL 0/1:25,27:52:99:627,0,511 chr1 156671745 . C T 996.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.006;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=0.700;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.24;ReadPosRankSum=1.020;SOR=0.588 GT:AD:DP:GQ:PL 0/1:76,45:121:99:1025,0,1982 chr1 156674874 . C G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 156674937 . C T 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=0.718;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:259,0,134 chr1 156675791 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 156675815 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 156675861 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 156676876 . A G 3913.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.66;SOR=0.748 GT:AD:DP:GQ:PL 1/1:0,111:111:99:3942,334,0 chr1 156692822 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 156693333 . G C 125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.97;ReadPosRankSum=-0.712;SOR=1.981 GT:AD:DP:GQ:PL 0/1:2,5:7:28:154,0,28 chr1 156700753 . C T 1786.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.24;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1815,138,0 chr1 156701191 . T C 348.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.88;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:377,30,0 chr1 156714767 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 156718580 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 156733664 . G C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.88;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 156735801 . G C 7923.77 PASS AC=2;AF=1.00;AN=2;DP=252;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.44;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,252:252:99:7952,756,0 chr1 156736467 . C T 355.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.339;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.23;ReadPosRankSum=-0.397;SOR=1.371 GT:AD:DP:GQ:PL 0/1:14,11:25:99:384,0,475 chr1 156736493 . T G 576.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.137;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.42;ReadPosRankSum=-0.522;SOR=0.954 GT:AD:DP:GQ:PL 0/1:21,19:40:99:605,0,689 chr1 156736767 . A C,G 4405.77 PASS AC=1,1;AF=0.500,0.500;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=60.00;QD=29.18;SOR=1.345 GT:AD:DP:GQ:PL 1/2:0,78,73:151:99:4434,2147,1913,2287,0,2069 chr1 156737905 . G A 1331.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.317;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=1.744;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.81;ReadPosRankSum=-2.717;SOR=0.940 GT:AD:DP:GQ:PL 0/1:62,42:104:99:1360,0,2172 chr1 156737983 . T G 7076.77 PASS AC=2;AF=1.00;AN=2;DP=201;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.06;SOR=2.066 GT:AD:DP:GQ:PL 1/1:0,201:201:99:7105,604,0 chr1 156738452 . C T 4643.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.046;ClippingRankSum=0.000;DP=300;ExcessHet=3.0103;FS=1.383;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.53;ReadPosRankSum=-1.786;SOR=0.789 GT:AD:DP:GQ:PL 0/1:134,165:299:99:4672,0,3764 chr1 156743720 . C T 1977.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.39;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2006,189,0 chr1 156745635 . C T 221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.909;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=2.706;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.24;ReadPosRankSum=2.271;SOR=1.445 GT:AD:DP:GQ:PL 0/1:16,8:24:99:250,0,523 chr1 156768177 . C T 4736.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.450;ClippingRankSum=0.000;DP=348;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.61;ReadPosRankSum=0.389;SOR=0.692 GT:AD:DP:GQ:PL 0/1:164,184:348:99:4765,0,4168 chr1 156782256 . C G 2214.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.06;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2243,201,0 chr1 156791095 . C A 1054.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.322;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=1.603;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.05;ReadPosRankSum=-0.580;SOR=0.941 GT:AD:DP:GQ:PL 0/1:62,43:105:99:1083,0,1665 chr1 156797201 . A G 1683.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.293;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=4.538;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.15;ReadPosRankSum=0.872;SOR=1.168 GT:AD:DP:GQ:PL 0/1:67,61:128:99:1712,0,1764 chr1 156802060 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 156804404 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 156805750 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 156808330 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 156815190 . T C 2299.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.39;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2328,213,0 chr1 156815564 . T C 2077.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.40;SOR=2.604 GT:AD:DP:GQ:PL 1/1:0,57:57:99:2106,171,0 chr1 156815825 . G A 8049.77 PASS AC=2;AF=1.00;AN=2;DP=240;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.54;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,240:240:99:8078,719,0 chr1 156815979 . A G 9854.77 PASS AC=2;AF=1.00;AN=2;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.71;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,214:214:99:9883,665,0 chr1 156815987 . G A 9205.77 PASS AC=2;AF=1.00;AN=2;DP=206;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.33;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,206:206:99:9234,629,0 chr1 156826455 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 156826510 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 156840298 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-0.385;SOR=0.991 GT:AD:DP:GQ:PL 0/1:3,3:6:73:107,0,73 chr1 156844235 . G A 2277.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.090;ClippingRankSum=0.000;DP=210;ExcessHet=3.0103;FS=3.904;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.90;ReadPosRankSum=0.525;SOR=0.613 GT:AD:DP:GQ:PL 0/1:116,93:209:99:2306,0,3071 chr1 156868055 . T C 1138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.181;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.968;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.04;ReadPosRankSum=0.555;SOR=0.871 GT:AD:DP:GQ:PL 0/1:29,42:71:99:1167,0,745 chr1 156868349 . T C 155.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.58;ReadPosRankSum=0.511;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,6:10:99:184,0,125 chr1 156871467 . A C 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.28;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr1 156874301 . C A 381.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.474;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=1.075;SOR=0.527 GT:AD:DP:GQ:PL 0/1:32,16:48:99:410,0,963 chr1 156876328 . C T 2161.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.804;ClippingRankSum=0.000;DP=176;ExcessHet=3.0103;FS=0.620;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.35;ReadPosRankSum=0.145;SOR=0.613 GT:AD:DP:GQ:PL 0/1:97,78:175:99:2190,0,3002 chr1 156879002 . C T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.598;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:88:107,0,88 chr1 156879016 . T C 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=0.697;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr1 156879203 . C T 1734.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.987;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=5.445;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.70;ReadPosRankSum=-2.195;SOR=0.336 GT:AD:DP:GQ:PL 0/1:53,65:118:99:1763,0,1644 chr1 156879988 . G A 1966.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.904;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=2.393;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.79;ReadPosRankSum=1.324;SOR=0.959 GT:AD:DP:GQ:PL 0/1:61,72:133:99:1995,0,1558 chr1 156880312 . G C 152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.82;ReadPosRankSum=-0.180;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:91:181,0,91 chr1 156880320 . T G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:62:81,0,62 chr1 156881249 . T G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.45;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 156882522 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 156886003 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 156893119 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 156893251 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 156898462 . C A 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.80;MQRankSum=-0.674;QD=23.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:33:123,0,33 chr1 156898463 . C G 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.80;MQRankSum=-0.674;QD=23.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:33:123,0,33 chr1 156902357 . G A 95.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:123,12,0 chr1 156902546 . C G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 156903671 . T C 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.000;SOR=3.258 GT:AD:DP:GQ:PL 0/1:2,4:6:31:149,0,31 chr1 156905201 . C T 704.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.989;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.647;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.10;ReadPosRankSum=0.052;SOR=0.294 GT:AD:DP:GQ:PL 0/1:28,22:50:99:733,0,888 chr1 156905245 . T G 1452.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.311;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=1.009;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.10;ReadPosRankSum=0.878;SOR=0.891 GT:AD:DP:GQ:PL 0/1:56,47:103:99:1481,0,1680 chr1 156905300 . G A 3861.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.181;ClippingRankSum=0.000;DP=192;ExcessHet=3.0103;FS=1.205;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.11;ReadPosRankSum=0.564;SOR=0.599 GT:AD:DP:GQ:PL 0/1:93,99:192:99:3890,0,3710 chr1 156905305 . G A 3866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.627;ClippingRankSum=0.000;DP=201;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.24;ReadPosRankSum=1.821;SOR=0.694 GT:AD:DP:GQ:PL 0/1:102,99:201:99:3895,0,4139 chr1 156905315 . C A 3988.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.599;ClippingRankSum=0.000;DP=224;ExcessHet=3.0103;FS=1.091;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.81;ReadPosRankSum=1.696;SOR=0.592 GT:AD:DP:GQ:PL 0/1:116,108:224:99:4017,0,4451 chr1 156905585 . G C 605.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.33;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,16:16:48:634,48,0 chr1 156905972 . G A 292.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.89;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:321,24,0 chr1 156906193 . G A 4517.77 PASS AC=2;AF=1.00;AN=2;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.22;SOR=1.273 GT:AD:DP:GQ:PL 1/1:0,136:136:99:4546,406,0 chr1 156907665 . T C 5196.77 PASS AC=2;AF=1.00;AN=2;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=1.491 GT:AD:DP:GQ:PL 1/1:0,155:155:99:5225,466,0 chr1 156908628 . G A 238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.293;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=6.113;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.05;ReadPosRankSum=-0.097;SOR=0.061 GT:AD:DP:GQ:PL 0/1:8,6:14:99:267,0,554 chr1 156908629 . C T 238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.135;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=5.497;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.92;ReadPosRankSum=-0.623;SOR=0.093 GT:AD:DP:GQ:PL 0/1:8,7:15:99:267,0,554 chr1 156912469 . C T 1905.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.555;ClippingRankSum=0.000;DP=177;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.77;ReadPosRankSum=-0.575;SOR=0.689 GT:AD:DP:GQ:PL 0/1:103,74:177:99:1934,0,2971 chr1 156913701 . G A 5231.77 PASS AC=2;AF=1.00;AN=2;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.90;SOR=1.383 GT:AD:DP:GQ:PL 1/1:0,159:159:99:5260,477,0 chr1 156913754 . A G 6676.77 PASS AC=2;AF=1.00;AN=2;DP=213;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.35;SOR=1.100 GT:AD:DP:GQ:PL 1/1:0,213:213:99:6705,638,0 chr1 156914573 . T C 2169.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.44;SOR=2.658 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2198,189,0 chr1 156924214 . C G 1301.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1330,114,0 chr1 156926372 . A G 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 156930488 . G C 3977.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.441;ClippingRankSum=0.000;DP=349;ExcessHet=3.0103;FS=0.818;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=0.706;SOR=0.643 GT:AD:DP:GQ:PL 0/1:182,167:349:99:4006,0,4846 chr1 156932467 . G A 2761.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.27;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2790,249,0 chr1 156936658 . A G 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.40;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 156937289 . T C 8701.77 PASS AC=2;AF=1.00;AN=2;DP=262;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.47;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,260:260:99:8730,780,0 chr1 156937323 . T C 8599.77 PASS AC=2;AF=1.00;AN=2;DP=253;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,251:251:99:8628,753,0 chr1 156948345 . C T 4237.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.184;ClippingRankSum=0.000;DP=300;ExcessHet=3.0103;FS=0.870;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.13;ReadPosRankSum=1.074;SOR=0.640 GT:AD:DP:GQ:PL 0/1:147,153:300:99:4266,0,4101 chr1 156963821 . G T 509.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.53;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:538,39,0 chr1 156969383 . C T 3617.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.90;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3646,361,0 chr1 156984427 . T C 4378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.733;ClippingRankSum=0.000;DP=387;ExcessHet=3.0103;FS=2.154;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.31;ReadPosRankSum=0.326;SOR=0.724 GT:AD:DP:GQ:PL 0/1:217,170:387:99:4407,0,5801 chr1 156984475 . C T 11101.77 PASS AC=2;AF=1.00;AN=2;DP=347;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=1.222 GT:AD:DP:GQ:PL 1/1:0,347:347:99:11130,1039,0 chr1 156984592 . T C 3975.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.54;SOR=4.743 GT:AD:DP:GQ:PL 1/1:0,103:103:99:4004,309,0 chr1 156986265 . T C 2629.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=5.074 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2658,199,0 chr1 157033735 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 157045234 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 157046154 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 157053306 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 157053386 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 157055625 . T A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=-1.834;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,81 chr1 157060412 . G T 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.79;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 157073252 . T C 321.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.18;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:30:350,30,0 chr1 157074177 . T C 1571.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.52;SOR=1.347 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1600,123,0 chr1 157074835 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 157089771 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 157106406 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 157125678 . A G 8800.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.080;ClippingRankSum=0.000;DP=662;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.31;ReadPosRankSum=0.935;SOR=0.722 GT:AD:DP:GQ:PL 0/1:329,332:661:99:8829,0,8763 chr1 157154096 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 157176887 . C G 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 157177784 . A C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 157277524 . G A 622.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.179;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.19;ReadPosRankSum=-1.879;SOR=0.650 GT:AD:DP:GQ:PL 0/1:14,27:41:99:651,0,416 chr1 157277656 . T C 237.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.917;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.29;ReadPosRankSum=-1.655;SOR=1.179 GT:AD:DP:GQ:PL 0/1:5,8:13:99:266,0,170 chr1 157370848 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 157372532 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=31.81;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr1 157372536 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 157448372 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 157459316 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 157488003 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 157511463 . C T 336.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:36:365,36,0 chr1 157515771 . G A 4115.77 PASS AC=2;AF=1.00;AN=2;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.91;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,129:129:99:4144,380,0 chr1 157515930 . T C 1060.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.06;SOR=4.332 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1089,81,0 chr1 157520920 . G A 1232.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.25;SOR=5.486 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1261,93,0 chr1 157521383 . T A 1485.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.69;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1514,126,0 chr1 157521532 . G A 138.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:166,12,0 chr1 157523895 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 157527473 . T C 2192.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.73;SOR=2.129 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2221,195,0 chr1 157538194 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 157538195 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 157539011 . C T 696.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.48;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,19:19:57:725,57,0 chr1 157539092 . C T 1709.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.61;SOR=3.209 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1738,135,0 chr1 157539235 . C T 4823.77 PASS AC=2;AF=1.00;AN=2;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.53;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,153:153:99:4852,459,0 chr1 157542663 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 157544307 . A G 6312.77 PASS AC=2;AF=1.00;AN=2;DP=197;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.04;SOR=1.226 GT:AD:DP:GQ:PL 1/1:0,197:197:99:6341,591,0 chr1 157580276 . T C 4146.77 PASS AC=2;AF=1.00;AN=2;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.15;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,129:129:99:4175,386,0 chr1 157586742 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 157587911 . G A 1685.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.72;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1714,150,0 chr1 157596180 . A G 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.77;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr1 157597575 . T G 136.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.38;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:165,15,0 chr1 157597961 . A G 5861.77 PASS AC=2;AF=1.00;AN=2;DP=174;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.69;SOR=1.679 GT:AD:DP:GQ:PL 1/1:0,174:174:99:5890,522,0 chr1 157601627 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 157601708 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 157625381 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 157625395 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 157625396 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 157629954 . T C 396.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.83;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:425,33,0 chr1 157630068 . C T 1236.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.35;SOR=1.739 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1265,108,0 chr1 157630127 . A G 1711.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.30;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1740,123,0 chr1 157630147 . T A 1704.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.52;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1733,120,0 chr1 157630198 . T C 991.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.97;SOR=2.215 GT:AD:DP:GQ:PL 1/1:0,25:25:75:1020,75,0 chr1 157630219 . G T 864.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.13;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,20:20:60:893,60,0 chr1 157636006 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 157636070 . G A 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.28;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr1 157636212 . G A 2001.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.82;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2030,183,0 chr1 157636223 . G A 2258.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.81;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2287,213,0 chr1 157636274 . C T 2741.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.63;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2770,231,0 chr1 157636504 . T A 1635.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.72;SOR=1.656 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1664,150,0 chr1 157638332 . A G 152.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:181,15,0 chr1 157640361 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.07;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 157642630 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 157642680 . G A 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 157642971 . A G 598.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.895;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=2.963;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.26;ReadPosRankSum=1.664;SOR=0.299 GT:AD:DP:GQ:PL 0/1:15,27:42:99:627,0,353 chr1 157748493 . A T 2786.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.40;SOR=1.995 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2815,258,0 chr1 157802090 . C T 8877.77 PASS AC=2;AF=1.00;AN=2;DP=266;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.50;SOR=0.991 GT:AD:DP:GQ:PL 1/1:0,265:265:99:8906,794,0 chr1 157832924 . T A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 157832958 . C G 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.81;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 157833087 . T C 1159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.038;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=2.055;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.06;ReadPosRankSum=-0.907;SOR=1.085 GT:AD:DP:GQ:PL 0/1:37,40:77:99:1188,0,939 chr1 157833189 . C T 5886.77 PASS AC=2;AF=1.00;AN=2;DP=183;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.17;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,183:183:99:5915,549,0 chr1 157834858 . G A 345.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.151;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.34;ReadPosRankSum=-0.608;SOR=1.473 GT:AD:DP:GQ:PL 0/1:6,11:17:99:374,0,187 chr1 157835860 . A T 1597.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.736;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=1.487;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=-1.533;SOR=0.910 GT:AD:DP:GQ:PL 0/1:56,63:119:99:1626,0,1470 chr1 157836216 . G A 6672.77 PASS AC=2;AF=1.00;AN=2;DP=204;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.71;SOR=1.306 GT:AD:DP:GQ:PL 1/1:0,204:204:99:6701,612,0 chr1 157839477 . G A 1552.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.252;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=3.230;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=1.674;SOR=0.720 GT:AD:DP:GQ:PL 0/1:67,58:125:99:1581,0,1658 chr1 157841602 . G A 3273.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.75;SOR=2.376 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3302,291,0 chr1 157925007 . T C 640.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.091;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.93;ReadPosRankSum=-1.320;SOR=0.577 GT:AD:DP:GQ:PL 0/1:20,26:46:99:669,0,544 chr1 157956665 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 158018329 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 158018362 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 158024169 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 158056135 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 158056614 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 158058319 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 158060016 . A T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 158075865 . A G 803.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.49;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,24:24:72:832,72,0 chr1 158075959 . A G 2296.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=2.194 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2325,189,0 chr1 158077811 . A G 480.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.61;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:509,39,0 chr1 158078331 . G A 460.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.73;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:489,36,0 chr1 158079173 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 158080572 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 158086509 . C G 7214.77 PASS AC=2;AF=1.00;AN=2;DP=215;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.71;SOR=2.173 GT:AD:DP:GQ:PL 1/1:0,214:214:99:7243,641,0 chr1 158086861 . A G 1580.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.81;SOR=7.378 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1609,117,0 chr1 158086989 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 158087630 . A T 4593.77 PASS AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.35;SOR=1.560 GT:AD:DP:GQ:PL 1/1:0,142:142:99:4622,426,0 chr1 158088319 . C A 6954.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.963;ClippingRankSum=0.000;DP=220;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.90;ReadPosRankSum=-0.825;SOR=0.402 GT:AD:DP:GQ:PL 1/1:1,217:218:99:6983,644,0 chr1 158090139 . T C 143.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.78;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:172,15,0 chr1 158097044 . A G 5730.77 PASS AC=2;AF=1.00;AN=2;DP=182;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.49;SOR=0.857 GT:AD:DP:GQ:PL 1/1:0,182:182:99:5759,546,0 chr1 158097257 . A C 559.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.14;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:588,45,0 chr1 158176238 . G A 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=0.967;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,4:6:31:115,0,31 chr1 158176302 . C G 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=-0.431;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,4:6:66:115,0,66 chr1 158176483 . C T 667.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.545;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.95;ReadPosRankSum=-1.022;SOR=0.643 GT:AD:DP:GQ:PL 0/1:31,30:61:99:696,0,771 chr1 158176596 . C A 476.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.410;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.181;SOR=0.722 GT:AD:DP:GQ:PL 0/1:28,23:51:99:505,0,791 chr1 158176742 . C T 196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.553;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=1.922;MLEAC=1;MLEAF=0.500;MQ=59.95;MQRankSum=-1.123;QD=9.84;ReadPosRankSum=-0.095;SOR=0.307 GT:AD:DP:GQ:PL 0/1:12,8:20:99:225,0,356 chr1 158177156 . T C 2049.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.06;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2078,186,0 chr1 158177819 . G A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 158177850 . G C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=1.036;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 158181428 . A G 747.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.416;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=5.356;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.66;ReadPosRankSum=0.408;SOR=0.204 GT:AD:DP:GQ:PL 0/1:26,25:51:99:776,0,919 chr1 158184206 . T C 1057.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.06;SOR=1.681 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1086,96,0 chr1 158188191 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 158193640 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 158195788 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=-0.842;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,120 chr1 158195811 . T C 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.82;ReadPosRankSum=0.366;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:69:69,0,190 chr1 158195871 . T C 410.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.38;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:45:439,45,0 chr1 158195932 . G A 271.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.166;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=0.803;SOR=0.446 GT:AD:DP:GQ:PL 0/1:12,8:20:99:300,0,469 chr1 158195952 . A T 271.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.298;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=0.558;SOR=0.446 GT:AD:DP:GQ:PL 0/1:12,8:20:99:300,0,469 chr1 158196148 . A C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.524;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 158196194 . C T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 158207624 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,197 chr1 158207638 . A G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,197 chr1 158207647 . G T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:81:81,0,116 chr1 158212714 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 158228272 . G A 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.54;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr1 158228275 . C T 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.90;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr1 158228320 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 158255035 . C T 854.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.147;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=-0.905;SOR=0.610 GT:AD:DP:GQ:PL 0/1:34,32:66:99:883,0,937 chr1 158255114 . C T 1424.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.482;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=0.736;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.61;ReadPosRankSum=-0.842;SOR=0.570 GT:AD:DP:GQ:PL 0/1:63,50:113:99:1453,0,1765 chr1 158255229 . C G 2179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.929;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=2.777;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.80;ReadPosRankSum=0.813;SOR=0.555 GT:AD:DP:GQ:PL 0/1:75,83:158:99:2208,0,2139 chr1 158255453 . A T 732.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.182;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.90;ReadPosRankSum=-1.033;SOR=0.636 GT:AD:DP:GQ:PL 0/1:44,30:74:99:761,0,1268 chr1 158328170 . C T 1373.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.845;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=0.678;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.26;ReadPosRankSum=-0.697;SOR=0.796 GT:AD:DP:GQ:PL 0/1:65,57:122:99:1402,0,1555 chr1 158330516 . G C 1266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.791;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=0.891;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.20;ReadPosRankSum=-0.423;SOR=0.852 GT:AD:DP:GQ:PL 0/1:53,43:96:99:1295,0,1547 chr1 158353171 . T C 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.05;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr1 158354635 . A G 1720.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.183;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.08;ReadPosRankSum=-0.010;SOR=0.715 GT:AD:DP:GQ:PL 0/1:46,61:107:99:1749,0,1142 chr1 158357108 . T C 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.842;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr1 158398342 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 158398519 . T G 1407.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.557;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=3.015;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.28;ReadPosRankSum=-0.104;SOR=1.087 GT:AD:DP:GQ:PL 0/1:58,48:106:99:1436,0,1555 chr1 158398751 . A G 4451.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.276;ClippingRankSum=0.000;DP=288;ExcessHet=3.0103;FS=8.166;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.46;ReadPosRankSum=-0.253;SOR=0.407 GT:AD:DP:GQ:PL 0/1:130,158:288:99:4480,0,3729 chr1 158399056 . T C 1532.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.355;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.43;ReadPosRankSum=0.015;SOR=0.641 GT:AD:DP:GQ:PL 0/1:90,57:147:99:1561,0,2661 chr1 158399174 . C T 2375.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.046;ClippingRankSum=0.000;DP=169;ExcessHet=3.0103;FS=1.231;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.06;ReadPosRankSum=-0.397;SOR=0.811 GT:AD:DP:GQ:PL 0/1:104,65:169:99:2404,0,6331 chr1 158399184 . A G 2488.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.813;ClippingRankSum=0.000;DP=173;ExcessHet=3.0103;FS=2.691;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=0.466;SOR=0.864 GT:AD:DP:GQ:PL 0/1:105,68:173:99:2517,0,6360 chr1 158399274 . A G 2109.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.856;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=0.469;SOR=0.671 GT:AD:DP:GQ:PL 0/1:79,78:157:99:2138,0,2085 chr1 158399529 . C A 212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.531;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=9.874;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.52;ReadPosRankSum=-0.159;SOR=3.516 GT:AD:DP:GQ:PL 0/1:10,7:17:99:241,0,264 chr1 158419840 . G C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 158419869 . T C 193.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.349;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.15;ReadPosRankSum=0.651;SOR=1.085 GT:AD:DP:GQ:PL 0/1:5,7:12:99:222,0,139 chr1 158420462 . T G 2058.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.388;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=7.539;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.92;ReadPosRankSum=-0.263;SOR=0.650 GT:AD:DP:GQ:PL 0/1:64,74:138:99:2087,0,1628 chr1 158420711 . G A 2139.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.693;ClippingRankSum=0.000;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.90;MQRankSum=0.000;QD=14.86;ReadPosRankSum=1.263;SOR=0.640 GT:AD:DP:GQ:PL 0/1:72,72:144:99:2168,0,2107 chr1 158421044 . C A 538.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.292;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.56;ReadPosRankSum=-0.677;SOR=0.859 GT:AD:DP:GQ:PL 0/1:19,18:37:99:567,0,546 chr1 158454132 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 158454847 . A C 351.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.27;QD=25.13;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:42:380,42,0 chr1 158455481 . C A 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=-1.611;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr1 158465460 . C T 787.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.440;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=1.201;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.07;ReadPosRankSum=0.707;SOR=1.093 GT:AD:DP:GQ:PL 0/1:28,28:56:99:816,0,721 chr1 158465488 . G A 950.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.586;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.58;ReadPosRankSum=0.151;SOR=0.693 GT:AD:DP:GQ:PL 0/1:35,35:70:99:979,0,930 chr1 158466509 . T C 763.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.467;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=-1.209;SOR=0.573 GT:AD:DP:GQ:PL 0/1:33,30:63:99:792,0,851 chr1 158480448 . G A 1092.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.928;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=7.462;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.52;ReadPosRankSum=0.160;SOR=1.751 GT:AD:DP:GQ:PL 0/1:26,33:59:99:1121,0,691 chr1 158480524 . A G 331.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.938;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=4.945;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.51;ReadPosRankSum=0.954;SOR=1.034 GT:AD:DP:GQ:PL 0/1:26,13:39:99:360,0,787 chr1 158480592 . C T 850.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.371;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.89;ReadPosRankSum=-0.141;SOR=0.770 GT:AD:DP:GQ:PL 0/1:38,28:66:99:879,0,1153 chr1 158523936 . C T 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=1.645;SOR=0.061 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 158524062 . A T 218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.331;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.84;ReadPosRankSum=-1.813;SOR=0.432 GT:AD:DP:GQ:PL 0/1:20,12:32:99:247,0,576 chr1 158524100 . G C 338.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.444;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=1.219;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.36;ReadPosRankSum=0.426;SOR=0.452 GT:AD:DP:GQ:PL 0/1:29,17:46:99:367,0,834 chr1 158524320 . A G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 158525211 . A T 489.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.399;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.89;ReadPosRankSum=-0.767;SOR=0.793 GT:AD:DP:GQ:PL 0/1:10,19:29:99:518,0,160 chr1 158525641 . G A 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.293;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.98;ReadPosRankSum=0.293;SOR=0.804 GT:AD:DP:GQ:PL 0/1:8,6:14:99:140,0,190 chr1 158530308 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 158530331 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:81,0,33 chr1 158537367 . A T 851.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.799;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.330;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.75;ReadPosRankSum=-0.093;SOR=0.432 GT:AD:DP:GQ:PL 0/1:25,23:48:99:880,0,1341 chr1 158537370 . T G 851.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.472;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.330;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.75;ReadPosRankSum=0.093;SOR=0.432 GT:AD:DP:GQ:PL 0/1:25,23:48:99:880,0,1341 chr1 158537394 . A G 699.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.652;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.60;ReadPosRankSum=1.325;SOR=0.580 GT:AD:DP:GQ:PL 0/1:37,29:66:99:728,0,1041 chr1 158537608 . G T 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.799;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.56;ReadPosRankSum=-0.311;SOR=0.223 GT:AD:DP:GQ:PL 0/1:8,4:12:99:131,0,264 chr1 158562615 . T G 451.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.462;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.38;ReadPosRankSum=-1.186;SOR=0.542 GT:AD:DP:GQ:PL 0/1:11,15:26:99:480,0,347 chr1 158563350 . A G 1129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.868;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.777;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.77;ReadPosRankSum=-0.553;SOR=0.608 GT:AD:DP:GQ:PL 0/1:52,44:96:99:1158,0,1503 chr1 158563434 . A G 577.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.177;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=1.221;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.33;ReadPosRankSum=-1.067;SOR=1.022 GT:AD:DP:GQ:PL 0/1:31,20:51:99:606,0,944 chr1 158579474 . G A 1735.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.734;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=0.716;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.78;ReadPosRankSum=0.483;SOR=0.820 GT:AD:DP:GQ:PL 0/1:49,61:110:99:1764,0,1294 chr1 158579630 . C T 1676.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.367;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=2.336;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.97;ReadPosRankSum=-0.125;SOR=0.787 GT:AD:DP:GQ:PL 0/1:59,61:120:99:1705,0,1625 chr1 158579702 . C T 1824.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.171;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=1.490;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.87;ReadPosRankSum=0.014;SOR=0.725 GT:AD:DP:GQ:PL 0/1:52,63:115:99:1853,0,1368 chr1 158579721 . A G 1763.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.324;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.03;ReadPosRankSum=0.442;SOR=0.663 GT:AD:DP:GQ:PL 0/1:47,63:110:99:1792,0,1277 chr1 158610969 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 158610988 . A G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 158611097 . T C 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=1.063;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,218 chr1 158612856 . T C 1995.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.407;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=2.439;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.77;ReadPosRankSum=-1.971;SOR=0.960 GT:AD:DP:GQ:PL 0/1:46,73:119:99:2024,0,1254 chr1 158614301 . A G 190.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.182;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.22;ReadPosRankSum=1.610;SOR=0.551 GT:AD:DP:GQ:PL 0/1:11,6:17:99:219,0,574 chr1 158617600 . C T 810.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.277;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.90;ReadPosRankSum=-0.246;SOR=0.681 GT:AD:DP:GQ:PL 0/1:24,27:51:99:839,0,647 chr1 158617994 . T G 522.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.68;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:42:551,42,0 chr1 158618068 . G A 539.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.090;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.99;ReadPosRankSum=0.493;SOR=0.836 GT:AD:DP:GQ:PL 0/1:11,19:30:99:568,0,233 chr1 158619126 . C G 440.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.727;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.77;ReadPosRankSum=-1.845;SOR=0.693 GT:AD:DP:GQ:PL 0/1:16,16:32:99:469,0,502 chr1 158622938 . A G 1674.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.206;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=0.902;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=0.280;SOR=0.505 GT:AD:DP:GQ:PL 0/1:56,56:112:99:1703,0,1696 chr1 158623145 . G A 2452.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.122;ClippingRankSum=0.000;DP=205;ExcessHet=3.0103;FS=4.159;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.02;ReadPosRankSum=0.328;SOR=1.000 GT:AD:DP:GQ:PL 0/1:112,92:204:99:2481,0,3025 chr1 158626034 . T C 756.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.304;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.84;ReadPosRankSum=-1.287;SOR=0.527 GT:AD:DP:GQ:PL 0/1:25,26:51:99:785,0,721 chr1 158626052 . C A 913.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.141;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.06;ReadPosRankSum=-0.568;SOR=0.655 GT:AD:DP:GQ:PL 0/1:33,32:65:99:942,0,911 chr1 158626734 . A G 462.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.066;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.14;ReadPosRankSum=-1.781;SOR=0.324 GT:AD:DP:GQ:PL 0/1:6,14:20:99:491,0,178 chr1 158627519 . A G 457.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.808;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.65;ReadPosRankSum=-0.022;SOR=0.551 GT:AD:DP:GQ:PL 0/1:25,18:43:99:486,0,779 chr1 158627717 . G C 845.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.324;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=1.074;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=-0.341;SOR=0.964 GT:AD:DP:GQ:PL 0/1:28,30:58:99:874,0,825 chr1 158636659 . G T 884.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.730;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=5.415;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=-0.337;SOR=0.655 GT:AD:DP:GQ:PL 0/1:57,35:92:99:913,0,1622 chr1 158637998 . T G 1696.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.63;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1725,156,0 chr1 158639510 . C G 1110.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.018;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=2.667;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.19;ReadPosRankSum=1.705;SOR=0.985 GT:AD:DP:GQ:PL 0/1:67,42:109:99:1139,0,2000 chr1 158642446 . A G 1448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.721;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=2.271;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=0.541;SOR=0.560 GT:AD:DP:GQ:PL 0/1:62,63:125:99:1477,0,1396 chr1 158644408 . C T 719.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.455;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.40;ReadPosRankSum=-0.719;SOR=0.804 GT:AD:DP:GQ:PL 0/1:24,26:50:99:748,0,704 chr1 158648433 . C T 552.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.925;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=1.345;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.16;ReadPosRankSum=2.034;SOR=0.363 GT:AD:DP:GQ:PL 0/1:21,21:42:99:581,0,678 chr1 158648690 . A T 431.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.545;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.70;ReadPosRankSum=0.311;SOR=0.693 GT:AD:DP:GQ:PL 0/1:17,17:34:99:460,0,476 chr1 158649938 . A C 2904.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.92;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2933,273,0 chr1 158654989 . T C 276.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.207;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.199;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.84;ReadPosRankSum=-1.812;SOR=0.184 GT:AD:DP:GQ:PL 0/1:8,12:20:99:305,0,223 chr1 158661467 . C T 577.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.135;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=0.380;SOR=0.551 GT:AD:DP:GQ:PL 0/1:24,21:45:99:606,0,718 chr1 158669811 . A G 1559.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.387;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=3.146;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.82;ReadPosRankSum=-2.803;SOR=0.451 GT:AD:DP:GQ:PL 0/1:69,63:132:99:1588,0,1639 chr1 158671049 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 158674315 . T A 615.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.510;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.10;ReadPosRankSum=-0.170;SOR=0.593 GT:AD:DP:GQ:PL 0/1:12,24:36:99:644,0,325 chr1 158677522 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.20;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 158677705 . A T 2572.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=1.193 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2601,243,0 chr1 158677732 . A G 584.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.418;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.65;ReadPosRankSum=1.412;SOR=0.616 GT:AD:DP:GQ:PL 0/1:61,27:88:99:613,0,1567 chr1 158677841 . T A 1715.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.32;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1744,149,0 chr1 158677879 . T C 347.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.545;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=4.061;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.54;ReadPosRankSum=1.630;SOR=0.180 GT:AD:DP:GQ:PL 0/1:20,13:33:99:376,0,589 chr1 158678218 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 158678700 . T C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 158684996 . C T 589.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.69;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:618,51,0 chr1 158685062 . A G 825.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.592;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=1.572;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.20;ReadPosRankSum=-0.081;SOR=0.342 GT:AD:DP:GQ:PL 0/1:13,30:43:99:854,0,352 chr1 158685246 . G A 2891.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.86;SOR=1.116 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2920,264,0 chr1 158685372 . C A 1316.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.35;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1345,126,0 chr1 158685525 . T A 179.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.27;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:208,15,0 chr1 158686491 . T C 851.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.42;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,28:28:84:880,84,0 chr1 158686851 . C A 395.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.27;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:424,42,0 chr1 158686863 . A T 362.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,11:11:33:391,33,0 chr1 158686968 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 158702648 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 158718106 . C T 1204.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.623;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.29;ReadPosRankSum=-0.458;SOR=0.627 GT:AD:DP:GQ:PL 0/1:50,48:98:99:1233,0,1350 chr1 158724654 . A G 181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=2.115;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.36;ReadPosRankSum=-0.077;SOR=0.636 GT:AD:DP:GQ:PL 0/1:9,7:16:99:210,0,260 chr1 158765805 . C T 7376.77 PASS AC=2;AF=1.00;AN=2;DP=230;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.35;SOR=1.392 GT:AD:DP:GQ:PL 1/1:0,228:228:99:7405,683,0 chr1 158765901 . T C 9968.77 PASS AC=2;AF=1.00;AN=2;DP=309;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.26;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,309:309:99:9997,928,0 chr1 158765950 . A G 9533.77 PASS AC=2;AF=1.00;AN=2;DP=294;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.54;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,293:293:99:9562,878,0 chr1 158766102 . A G 6152.77 PASS AC=2;AF=1.00;AN=2;DP=172;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.54;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,170:170:99:6181,511,0 chr1 158766425 . G A 5140.77 PASS AC=2;AF=1.00;AN=2;DP=157;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.74;SOR=1.060 GT:AD:DP:GQ:PL 1/1:0,157:157:99:5169,471,0 chr1 158766655 . C T 883.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.138;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=2.156;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.19;ReadPosRankSum=1.636;SOR=0.418 GT:AD:DP:GQ:PL 0/1:33,34:67:99:912,0,870 chr1 158766727 . A T 431.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.937;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.42;ReadPosRankSum=-0.688;SOR=1.127 GT:AD:DP:GQ:PL 0/1:14,14:28:99:460,0,428 chr1 158777716 . C G 1009.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.168;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=5.246;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.02;ReadPosRankSum=-0.878;SOR=0.283 GT:AD:DP:GQ:PL 0/1:33,39:72:99:1038,0,922 chr1 158844029 . A G 1992.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.14;SOR=1.234 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2021,186,0 chr1 158847684 . A G 366.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.961;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.28;ReadPosRankSum=0.378;SOR=1.302 GT:AD:DP:GQ:PL 0/1:12,12:24:99:395,0,361 chr1 158848185 . T C 394.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.37;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:423,33,0 chr1 158871122 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 158876309 . C T 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr1 158878791 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 158878931 . T G 328.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.89;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:33:357,33,0 chr1 158879082 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 158880783 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.559;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.86;ReadPosRankSum=0.589;SOR=0.148 GT:AD:DP:GQ:PL 0/1:5,4:9:72:72,0,148 chr1 158939255 . C A 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.133;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.40;ReadPosRankSum=0.062;SOR=0.437 GT:AD:DP:GQ:PL 0/1:11,6:17:99:188,0,340 chr1 158939374 . C A 1661.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.31;SOR=3.467 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1690,132,0 chr1 158943735 . A G 404.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.73;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,12:12:36:433,36,0 chr1 158950498 . G C 252.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.28;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:30:281,30,0 chr1 158950528 . C T 278.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.98;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:307,27,0 chr1 158961883 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 158976355 . G A 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.08;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr1 158976357 . T G 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.02;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr1 158991740 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 159016435 . T C 635.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.54;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:664,48,0 chr1 159016687 . G C 3907.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.51;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3936,372,0 chr1 159018151 . A G 922.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.65;SOR=3.098 GT:AD:DP:GQ:PL 1/1:0,26:26:78:951,78,0 chr1 159020622 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.59;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 159032365 . T A 293.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.49;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:322,24,0 chr1 159032432 . A G 1169.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.76;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1198,93,0 chr1 159032511 . T C 2342.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.24;SOR=1.488 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2371,225,0 chr1 159032587 . C A 3330.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.42;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,106:106:99:3359,318,0 chr1 159032599 . T A 3304.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3333,309,0 chr1 159032767 . A G 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.93;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr1 159062465 . G T 313.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:342,27,0 chr1 159063712 . G T 182.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.195;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=0.479;SOR=0.892 GT:AD:DP:GQ:PL 0/1:11,8:19:99:211,0,335 chr1 159171773 . C T 93.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.996;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.25;ReadPosRankSum=0.084;SOR=0.582 GT:AD:DP:GQ:PL 0/1:11,4:15:99:122,0,380 chr1 159177662 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 159193329 . C T 418.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.16;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:447,33,0 chr1 159198819 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 159199421 . G A 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=-0.108;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,112 chr1 159199851 . T C 4713.77 PASS AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.96;SOR=1.435 GT:AD:DP:GQ:PL 1/1:0,143:143:99:4742,429,0 chr1 159276733 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 159279069 . C T 298.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.356;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=3.590;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.67;ReadPosRankSum=0.768;SOR=2.215 GT:AD:DP:GQ:PL 0/1:7,9:16:99:327,0,210 chr1 159279276 . C T 1035.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.347;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.04;ReadPosRankSum=-0.473;SOR=0.966 GT:AD:DP:GQ:PL 0/1:10,37:47:99:1064,0,174 chr1 159279348 . G A 513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.471;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=5.617;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.35;ReadPosRankSum=-0.393;SOR=2.129 GT:AD:DP:GQ:PL 0/1:5,17:22:99:542,0,143 chr1 159279397 . G C 625.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.654;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=10.160;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.88;ReadPosRankSum=-0.739;SOR=0.061 GT:AD:DP:GQ:PL 0/1:16,19:35:99:654,0,517 chr1 159279953 . G T 1102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.319;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=2.257;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.97;ReadPosRankSum=0.972;SOR=1.070 GT:AD:DP:GQ:PL 0/1:35,30:65:99:1131,0,2163 chr1 159279955 . G T 1102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.254;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=2.335;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.97;ReadPosRankSum=0.960;SOR=1.174 GT:AD:DP:GQ:PL 0/1:36,29:65:99:1131,0,2163 chr1 159302021 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 159302974 . C T 221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.035;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.86;ReadPosRankSum=0.132;SOR=0.368 GT:AD:DP:GQ:PL 0/1:6,10:16:99:250,0,169 chr1 159305916 . G A 524.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.849;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=3.506;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.40;ReadPosRankSum=-0.876;SOR=0.223 GT:AD:DP:GQ:PL 0/1:14,18:32:99:553,0,442 chr1 159306363 . C T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 159313704 . T C 2265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.630;ClippingRankSum=0.000;DP=169;ExcessHet=3.0103;FS=1.344;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=0.988;SOR=0.848 GT:AD:DP:GQ:PL 0/1:87,82:169:99:2294,0,2542 chr1 159313956 . T C 3241.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.725;ClippingRankSum=0.000;DP=230;ExcessHet=3.0103;FS=5.583;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=0.046;SOR=1.039 GT:AD:DP:GQ:PL 0/1:108,122:230:99:3270,0,3040 chr1 159351885 . G T 229.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.443;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.09;ReadPosRankSum=-0.859;SOR=0.859 GT:AD:DP:GQ:PL 0/1:9,10:19:99:258,0,183 chr1 159406113 . C T 290.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.205;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.15;ReadPosRankSum=0.455;SOR=0.551 GT:AD:DP:GQ:PL 0/1:5,13:18:87:319,0,87 chr1 159432905 . A C 749.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.08;SOR=2.737 GT:AD:DP:GQ:PL 1/1:0,22:22:66:778,66,0 chr1 159439406 . T C 1293.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.34;SOR=2.191 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1322,119,0 chr1 159439689 . T G 202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.638;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.82;ReadPosRankSum=0.911;SOR=0.582 GT:AD:DP:GQ:PL 0/1:15,8:23:99:231,0,523 chr1 159439743 . G A 1388.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.72;SOR=1.788 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1417,120,0 chr1 159439944 . G T 3576.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.73;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3605,309,0 chr1 159440094 . G A 1513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.188;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.38;ReadPosRankSum=0.764;SOR=0.658 GT:AD:DP:GQ:PL 0/1:76,57:133:99:1542,0,2183 chr1 159494600 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 159535507 . C T 2654.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.149;ClippingRankSum=0.000;DP=224;ExcessHet=3.0103;FS=2.997;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.85;ReadPosRankSum=0.542;SOR=0.895 GT:AD:DP:GQ:PL 0/1:120,104:224:99:2683,0,3238 chr1 159557002 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 159588468 . A G 7735.77 PASS AC=2;AF=1.00;AN=2;DP=229;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=0.851 GT:AD:DP:GQ:PL 1/1:0,229:229:99:7764,687,0 chr1 159714396 . T A 688.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.500;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=3.337;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.06;ReadPosRankSum=0.190;SOR=1.117 GT:AD:DP:GQ:PL 0/1:49,27:76:99:717,0,1344 chr1 159780942 . A C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,96 chr1 159781012 . G C 104.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.444;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.363;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.48;ReadPosRankSum=1.311;SOR=0.223 GT:AD:DP:GQ:PL 0/1:9,5:14:99:133,0,288 chr1 159800334 . G T 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.967;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:53:149,0,53 chr1 159802745 . A G 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.589;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-1.465;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,170 chr1 159808573 . C A 2196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.495;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=0.843;MLEAC=1;MLEAF=0.500;MQ=59.89;MQRankSum=-1.255;QD=16.77;ReadPosRankSum=0.312;SOR=0.591 GT:AD:DP:GQ:PL 0/1:58,73:131:99:2225,0,1721 chr1 159808733 . C T 223.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=6.990;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.38;ReadPosRankSum=-1.235;SOR=0.486 GT:AD:DP:GQ:PL 0/1:3,7:10:95:252,0,95 chr1 159808782 . A G 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=8.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.18;ReadPosRankSum=-0.632;SOR=3.611 GT:AD:DP:GQ:PL 0/1:6,9:15:99:331,0,205 chr1 159808909 . G A 1098.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.201;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=6.053;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.57;ReadPosRankSum=-0.308;SOR=1.386 GT:AD:DP:GQ:PL 0/1:56,39:95:99:1127,0,1654 chr1 159809193 . T C 1079.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.023;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=7.194;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.88;ReadPosRankSum=0.022;SOR=1.668 GT:AD:DP:GQ:PL 0/1:33,35:68:99:1108,0,972 chr1 159813358 . C T 756.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.412;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.62;ReadPosRankSum=-1.092;SOR=1.079 GT:AD:DP:GQ:PL 0/1:11,24:35:99:785,0,321 chr1 159813769 . C T 878.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.963;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=2.944;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.41;ReadPosRankSum=-0.902;SOR=1.241 GT:AD:DP:GQ:PL 0/1:30,31:61:99:907,0,822 chr1 159814043 . T C 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=-0.120;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,220 chr1 159814061 . C T 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.56;ReadPosRankSum=-0.079;SOR=0.269 GT:AD:DP:GQ:PL 0/1:8,4:12:99:131,0,298 chr1 159814384 . A G 681.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.057;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=9.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.36;ReadPosRankSum=-0.798;SOR=2.453 GT:AD:DP:GQ:PL 0/1:37,23:60:99:710,0,1091 chr1 159815494 . C G 9691.77 PASS AC=2;AF=1.00;AN=2;DP=297;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.63;SOR=1.311 GT:AD:DP:GQ:PL 1/1:0,297:297:99:9720,890,0 chr1 159815580 . T C 5005.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.767;ClippingRankSum=0.000;DP=371;ExcessHet=3.0103;FS=3.302;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=0.125;SOR=0.867 GT:AD:DP:GQ:PL 0/1:186,185:371:99:5034,0,4933 chr1 159815635 . A G 4134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.615;ClippingRankSum=0.000;DP=326;ExcessHet=3.0103;FS=0.860;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.68;ReadPosRankSum=0.373;SOR=0.764 GT:AD:DP:GQ:PL 0/1:176,150:326:99:4163,0,4586 chr1 159832837 . A C 3459.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.382;ClippingRankSum=0.000;DP=236;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.66;ReadPosRankSum=1.002;SOR=0.712 GT:AD:DP:GQ:PL 0/1:111,125:236:99:3488,0,3103 chr1 159838179 . A T 306.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.650;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.17;ReadPosRankSum=-0.713;SOR=1.329 GT:AD:DP:GQ:PL 0/1:6,10:16:99:335,0,168 chr1 159855177 . G C 1643.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.55;SOR=1.225 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1672,147,0 chr1 159855271 . G C 738.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.008;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=4.295;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.12;ReadPosRankSum=-0.213;SOR=0.800 GT:AD:DP:GQ:PL 0/1:47,34:81:99:767,0,1243 chr1 159856126 . C T 1300.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.096;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=3.246;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.36;ReadPosRankSum=0.089;SOR=0.980 GT:AD:DP:GQ:PL 0/1:85,54:139:99:1329,0,2337 chr1 159856258 . C T 1686.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.39;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1715,129,0 chr1 159856858 . C T 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.98;ReadPosRankSum=-0.405;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:188,0,137 chr1 159857666 . A G 1599.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.352;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=3.007;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=-1.992;SOR=1.055 GT:AD:DP:GQ:PL 0/1:49,58:107:99:1628,0,1371 chr1 159858338 . A G 6818.77 PASS AC=2;AF=1.00;AN=2;DP=205;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=1.348 GT:AD:DP:GQ:PL 1/1:0,205:205:99:6847,615,0 chr1 159858956 . G A 1801.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.76;SOR=1.739 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1830,164,0 chr1 159862635 . G A 1169.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.49;SOR=1.547 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1198,107,0 chr1 159870751 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 159872298 . T A 2251.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.64;SOR=2.730 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2280,194,0 chr1 159872313 . C T 2806.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.21;SOR=2.554 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2835,234,0 chr1 159872776 . T A 1961.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.94;SOR=1.314 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1990,153,0 chr1 159872901 . C G 2446.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.06;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2475,222,0 chr1 159873341 . A G 273.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.22;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:302,24,0 chr1 159884602 . C A 783.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.08;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,23:23:69:812,69,0 chr1 159886304 . C T 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.75;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 159889602 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 159889834 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 159890469 . G A 4319.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.364;ClippingRankSum=0.000;DP=287;ExcessHet=3.0103;FS=4.039;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.10;ReadPosRankSum=1.110;SOR=0.924 GT:AD:DP:GQ:PL 0/1:131,155:286:99:4348,0,3613 chr1 159891127 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 159919896 . G A 4379.77 PASS AC=2;AF=1.00;AN=2;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.44;SOR=1.011 GT:AD:DP:GQ:PL 1/1:0,135:135:99:4408,405,0 chr1 159927336 . C T 652.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.117;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=7.519;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.06;ReadPosRankSum=-0.483;SOR=1.956 GT:AD:DP:GQ:PL 0/1:35,24:59:99:681,0,1013 chr1 159927598 . C T 2485.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.053;ClippingRankSum=0.000;DP=190;ExcessHet=3.0103;FS=3.440;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.08;ReadPosRankSum=-1.163;SOR=0.490 GT:AD:DP:GQ:PL 0/1:91,99:190:99:2514,0,2502 chr1 159928310 . A G 1514.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=-0.358;SOR=0.692 GT:AD:DP:GQ:PL 0/1:49,51:100:99:1543,0,1474 chr1 159929123 . A G 809.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.034;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.60;ReadPosRankSum=-0.428;SOR=0.839 GT:AD:DP:GQ:PL 0/1:21,25:46:99:838,0,637 chr1 159932736 . T C 1761.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.255;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=8.681;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.02;ReadPosRankSum=-1.160;SOR=1.536 GT:AD:DP:GQ:PL 0/1:49,61:110:99:1790,0,1376 chr1 159936366 . A G 1444.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.387;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=3.557;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.25;ReadPosRankSum=-0.069;SOR=1.077 GT:AD:DP:GQ:PL 0/1:55,54:109:99:1473,0,1479 chr1 159937059 . A G 406.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.49;ReadPosRankSum=-0.598;SOR=0.874 GT:AD:DP:GQ:PL 0/1:10,12:22:99:435,0,349 chr1 159937572 . A G 1239.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.750;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.54;ReadPosRankSum=0.438;SOR=0.807 GT:AD:DP:GQ:PL 0/1:24,31:55:99:1268,0,1614 chr1 159937577 . T C 1275.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.147;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=1.276;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.00;ReadPosRankSum=0.472;SOR=1.085 GT:AD:DP:GQ:PL 0/1:25,33:58:99:1304,0,1632 chr1 159942417 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 159942539 . C G 49.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:77,6,0 chr1 159943598 . G A 1207.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.16;SOR=4.680 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1236,96,0 chr1 159950196 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 159952579 . C T 6615.77 PASS AC=2;AF=1.00;AN=2;DP=195;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.93;SOR=1.671 GT:AD:DP:GQ:PL 1/1:0,195:195:99:6644,586,0 chr1 159953169 . C T 1372.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.60;SOR=4.921 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1401,108,0 chr1 159953321 . T G 8273.77 PASS AC=2;AF=1.00;AN=2;DP=255;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.57;SOR=1.430 GT:AD:DP:GQ:PL 1/1:0,254:254:99:8302,761,0 chr1 159953838 . A C 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 159972666 . C T 526.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.72;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:57:555,57,0 chr1 160030921 . C T 1542.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.768;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=1.357;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.02;ReadPosRankSum=-1.680;SOR=0.858 GT:AD:DP:GQ:PL 0/1:82,58:140:99:1571,0,2232 chr1 160066014 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 160067393 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 160073799 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 160073908 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 160113222 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 160116078 . A C 1509.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.21;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1538,126,0 chr1 160120884 . T C 4314.77 PASS AC=2;AF=1.00;AN=2;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.96;SOR=1.754 GT:AD:DP:GQ:PL 1/1:0,135:135:99:4343,405,0 chr1 160123432 . C T 10235.77 PASS AC=2;AF=1.00;AN=2;DP=323;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.69;SOR=0.979 GT:AD:DP:GQ:PL 1/1:0,323:323:99:10264,969,0 chr1 160124121 . T C 6174.77 PASS AC=2;AF=1.00;AN=2;DP=185;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.38;SOR=1.235 GT:AD:DP:GQ:PL 1/1:0,185:185:99:6203,555,0 chr1 160124137 . T A 5751.77 PASS AC=2;AF=1.00;AN=2;DP=176;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.68;SOR=1.153 GT:AD:DP:GQ:PL 1/1:0,176:176:99:5780,528,0 chr1 160124553 . T C 2613.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.09;SOR=1.996 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2642,237,0 chr1 160124668 . A G 303.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.24;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:332,24,0 chr1 160129587 . C G 190.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.105;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.67;ReadPosRankSum=1.102;SOR=0.223 GT:AD:DP:GQ:PL 0/1:6,7:13:99:219,0,211 chr1 160155085 . G A 753.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,22:22:66:782,66,0 chr1 160156348 . C T 539.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.64;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:568,42,0 chr1 160158674 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 160158881 . G A 3644.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.14;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3673,307,0 chr1 160159204 . C T 2367.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.09;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2396,183,0 chr1 160164415 . C T 4492.77 PASS AC=2;AF=1.00;AN=2;DP=130;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.56;SOR=2.780 GT:AD:DP:GQ:PL 1/1:0,130:130:99:4521,390,0 chr1 160166418 . G A 426.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.916;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=-0.162;SOR=1.514 GT:AD:DP:GQ:PL 0/1:17,15:32:99:455,0,576 chr1 160166560 . G A 4190.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.383;ClippingRankSum=0.000;DP=308;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.68;MQRankSum=-4.594;QD=13.61;ReadPosRankSum=0.653;SOR=0.664 GT:AD:DP:GQ:PL 0/1:162,146:308:99:4219,0,4845 chr1 160167510 . A C 2882.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2911,264,0 chr1 160171035 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 160171096 . T C 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 160171208 . G A 1737.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.71;SOR=3.564 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1766,138,0 chr1 160171406 . C T 5353.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.413;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.25;ReadPosRankSum=1.118;SOR=0.718 GT:AD:DP:GQ:PL 1/1:2,164:166:99:5382,448,0 chr1 160171495 . C T 7348.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.857;ClippingRankSum=0.000;DP=165;ExcessHet=3.0103;FS=3.144;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=25.20;ReadPosRankSum=2.178;SOR=0.340 GT:AD:DP:GQ:PL 1/1:1,164:165:99:7377,469,0 chr1 160171496 . C G 7348.77 PASS AC=2;AF=1.00;AN=2;DP=166;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.07;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,166:166:99:7377,469,0 chr1 160171887 . G A 1036.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.649;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.58;ReadPosRankSum=1.059;SOR=0.649 GT:AD:DP:GQ:PL 0/1:58,40:98:99:1065,0,1603 chr1 160175898 . C G 1774.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.27;SOR=1.487 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1803,165,0 chr1 160176786 . A G 1261.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.35;SOR=1.923 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1290,117,0 chr1 160176855 . T C 522.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.69;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:551,42,0 chr1 160177000 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 160177013 . A G 99.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:127,9,0 chr1 160177358 . A G 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 160177712 . T G 5747.77 PASS AC=2;AF=1.00;AN=2;DP=172;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.42;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,172:172:99:5776,516,0 chr1 160181660 . T C 4218.77 PASS AC=2;AF=1.00;AN=2;DP=139;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.79;SOR=1.476 GT:AD:DP:GQ:PL 1/1:0,137:137:99:4247,409,0 chr1 160194878 . T C 1373.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.30;SOR=4.351 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1402,111,0 chr1 160195305 . A C 4859.77 PASS AC=2;AF=1.00;AN=2;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=3.327 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4888,402,0 chr1 160195661 . C T 1316.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.65;SOR=3.145 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1345,113,0 chr1 160197115 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 160199683 . T C 1598.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.81;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1627,129,0 chr1 160208566 . A G 6343.77 PASS AC=2;AF=1.00;AN=2;DP=196;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.37;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,196:196:99:6372,588,0 chr1 160208935 . A C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 160217383 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 160244237 . T C 416.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.10;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:445,33,0 chr1 160263555 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 160266680 . T A 4388.77 PASS AC=2;AF=1.00;AN=2;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.76;QD=32.27;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,136:136:99:4417,408,0 chr1 160277395 . G C 3399.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.33;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3428,306,0 chr1 160282002 . A G 4060.77 PASS AC=2;AF=1.00;AN=2;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.84;SOR=2.033 GT:AD:DP:GQ:PL 1/1:0,116:116:99:4089,348,0 chr1 160290443 . T C 2824.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.00;SOR=1.734 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2853,231,0 chr1 160292888 . T C 313.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:342,27,0 chr1 160293334 . C T 5300.77 PASS AC=2;AF=1.00;AN=2;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.13;SOR=1.003 GT:AD:DP:GQ:PL 1/1:0,160:160:99:5329,480,0 chr1 160295725 . T C 4041.77 PASS AC=2;AF=1.00;AN=2;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=38.33;SOR=3.549 GT:AD:DP:GQ:PL 1/1:0,107:107:99:4070,322,0 chr1 160305644 . A G 7390.77 PASS AC=2;AF=1.00;AN=2;DP=256;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.98;SOR=1.138 GT:AD:DP:GQ:PL 1/1:0,255:255:99:7419,755,0 chr1 160306919 . T C 385.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.06;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:414,30,0 chr1 160321769 . T C 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr1 160324017 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 160332654 . G A 720.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.76;SOR=1.931 GT:AD:DP:GQ:PL 1/1:0,22:22:66:749,66,0 chr1 160333626 . G A 4344.77 PASS AC=2;AF=1.00;AN=2;DP=134;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.42;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4373,402,0 chr1 160333756 . A G 2072.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.44;SOR=3.076 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2101,177,0 chr1 160339660 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 160339719 . T A 546.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.45;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:575,42,0 chr1 160339874 . T G 2910.77 PASS AC=2;AF=1.00;AN=2;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.85;SOR=1.477 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2939,258,0 chr1 160343943 . C A 2935.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.91;SOR=2.252 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2964,273,0 chr1 160349150 . A G 1199.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.393;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.33;ReadPosRankSum=-1.437;SOR=0.641 GT:AD:DP:GQ:PL 0/1:48,42:90:99:1228,0,1413 chr1 160351060 . G T 300.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.783;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.03;ReadPosRankSum=-0.484;SOR=1.148 GT:AD:DP:GQ:PL 0/1:15,10:25:99:329,0,505 chr1 160370620 . A C 541.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.952;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=1.582;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.89;ReadPosRankSum=1.252;SOR=0.332 GT:AD:DP:GQ:PL 0/1:19,20:39:99:570,0,565 chr1 160460679 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 160480909 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 160486922 . G C 412.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.64;ReadPosRankSum=2.831;SOR=0.467 GT:AD:DP:GQ:PL 0/1:8,12:20:99:441,0,270 chr1 160487337 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 160488820 . A G 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr1 160488992 . A G 1135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.254;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.38;ReadPosRankSum=-0.145;SOR=0.686 GT:AD:DP:GQ:PL 0/1:37,42:79:99:1164,0,1019 chr1 160490119 . C A 225.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.019;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.10;ReadPosRankSum=-0.841;SOR=0.622 GT:AD:DP:GQ:PL 0/1:25,12:37:99:254,0,646 chr1 160490309 . T A 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.98;ReadPosRankSum=0.170;SOR=0.693 GT:AD:DP:GQ:PL 0/1:7,7:14:99:182,0,182 chr1 160491709 . C T 328.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.645;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.55;ReadPosRankSum=-0.341;SOR=1.244 GT:AD:DP:GQ:PL 0/1:6,10:16:99:357,0,195 chr1 160496566 . A G 281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.160;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.67;ReadPosRankSum=-1.349;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,10:13:86:310,0,86 chr1 160530171 . C T 192.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.54;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:221,21,0 chr1 160552937 . A G 1628.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.399;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=3.599;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.79;ReadPosRankSum=2.106;SOR=0.376 GT:AD:DP:GQ:PL 0/1:43,54:97:99:1657,0,1277 chr1 160579090 . T G 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.605;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.25;ReadPosRankSum=-2.000;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:185,0,176 chr1 160587518 . A G 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.26;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:62,0,33 chr1 160601137 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 160610225 . A G 453.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.639;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.65;ReadPosRankSum=-0.275;SOR=0.693 GT:AD:DP:GQ:PL 0/1:28,19:47:99:482,0,824 chr1 160611017 . T C 155.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.174;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=3.183;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.08;ReadPosRankSum=-0.556;SOR=0.132 GT:AD:DP:GQ:PL 0/1:16,6:22:99:184,0,555 chr1 160612423 . C A 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.325;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=2.035;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.99;ReadPosRankSum=1.809;SOR=0.208 GT:AD:DP:GQ:PL 0/1:16,7:23:99:143,0,483 chr1 160612458 . C G 265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.297;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=2.912;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.91;ReadPosRankSum=0.175;SOR=0.328 GT:AD:DP:GQ:PL 0/1:32,13:45:99:294,0,938 chr1 160615764 . C G 2652.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.16;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2681,240,0 chr1 160615916 . C T 1318.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.81;SOR=2.891 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1347,117,0 chr1 160631821 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 160634382 . T G 467.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.98;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:496,36,0 chr1 160635073 . A T 1910.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.60;SOR=4.935 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1939,147,0 chr1 160637079 . A T 965.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.262;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=1.953;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.38;ReadPosRankSum=-0.454;SOR=1.022 GT:AD:DP:GQ:PL 0/1:38,40:78:99:994,0,967 chr1 160674501 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 160681123 . A G 3227.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.15;SOR=2.140 GT:AD:DP:GQ:PL 1/1:0,84:84:99:3256,253,0 chr1 160691868 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 160711985 . A G 468.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.468;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.12;ReadPosRankSum=-1.641;SOR=0.859 GT:AD:DP:GQ:PL 0/1:13,18:31:99:497,0,350 chr1 160712073 . G T 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.53;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr1 160748082 . T G 5372.77 PASS AC=2;AF=1.00;AN=2;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.60;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,170:170:99:5401,510,0 chr1 160752274 . A G 943.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.49;SOR=3.098 GT:AD:DP:GQ:PL 1/1:0,26:26:78:972,78,0 chr1 160753466 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 160783249 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 160801971 . C A 1205.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.392;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=0.807;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.82;ReadPosRankSum=1.793;SOR=0.570 GT:AD:DP:GQ:PL 0/1:55,47:102:99:1234,0,1546 chr1 160807923 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 160816880 . A G 1775.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.534;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=4.373;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.71;ReadPosRankSum=0.082;SOR=0.346 GT:AD:DP:GQ:PL 0/1:51,62:113:99:1804,0,1535 chr1 160817915 . T C 99.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.67;ReadPosRankSum=0.432;SOR=0.223 GT:AD:DP:GQ:PL 0/1:9,4:13:99:128,0,366 chr1 160817935 . T C 573.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.08;ReadPosRankSum=0.000;SOR=1.931 GT:AD:DP:GQ:PL 0/1:6,16:22:99:602,0,194 chr1 160818341 . T C 1176.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.354;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.31;ReadPosRankSum=1.373;SOR=0.647 GT:AD:DP:GQ:PL 0/1:26,42:68:99:1205,0,739 chr1 160818427 . T A 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.105;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.60;ReadPosRankSum=-0.405;SOR=0.223 GT:AD:DP:GQ:PL 0/1:6,7:13:99:218,0,212 chr1 160818480 . C T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.44;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 160819406 . A C 3687.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.52;SOR=1.309 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3716,351,0 chr1 160819518 . C T 971.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.73;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,24:24:72:1000,72,0 chr1 160823652 . A G 11906.77 PASS AC=2;AF=1.00;AN=2;DP=358;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,358:358:99:11935,1075,0 chr1 160823770 . A G 8288.77 PASS AC=2;AF=1.00;AN=2;DP=246;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.69;SOR=1.719 GT:AD:DP:GQ:PL 1/1:0,246:246:99:8317,739,0 chr1 160824172 . G C 5820.77 PASS AC=2;AF=1.00;AN=2;DP=167;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.85;SOR=1.667 GT:AD:DP:GQ:PL 1/1:0,167:167:99:5849,502,0 chr1 160824666 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 160824707 . C T 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr1 160824764 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 160827533 . T G 1032.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.93;SOR=5.211 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1061,81,0 chr1 160827724 . C G 4668.77 PASS AC=2;AF=1.00;AN=2;DP=153;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.51;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,153:153:99:4697,459,0 chr1 160827894 . A G 1258.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.57;SOR=2.964 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1287,105,0 chr1 160831256 . C G 826.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.404;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.107;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=-0.823;SOR=0.963 GT:AD:DP:GQ:PL 0/1:23,30:53:99:855,0,597 chr1 160831701 . T A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=6.021;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-1.150;SOR=2.788 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 160832889 . C T 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:76:123,0,76 chr1 160832891 . C T 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:76:123,0,76 chr1 160832899 . T C 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:76:123,0,76 chr1 160834012 . A G 1195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.095;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=5.586;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.90;ReadPosRankSum=1.972;SOR=0.311 GT:AD:DP:GQ:PL 0/1:40,46:86:99:1224,0,1011 chr1 160838686 . C G 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-0.566;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 160839213 . G A 552.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.640;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.82;ReadPosRankSum=-0.016;SOR=0.976 GT:AD:DP:GQ:PL 0/1:22,18:40:99:581,0,764 chr1 160842040 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-0.598;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 160862422 . A G 970.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.351;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=2.279;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.07;ReadPosRankSum=0.060;SOR=1.056 GT:AD:DP:GQ:PL 0/1:34,35:69:99:999,0,930 chr1 160879147 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr1 160879203 . G A 191.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.18;ReadPosRankSum=0.303;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:220,0,136 chr1 160879240 . T A 376.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.748;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=3.067;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.13;ReadPosRankSum=0.802;SOR=0.148 GT:AD:DP:GQ:PL 0/1:9,13:22:99:405,0,308 chr1 160879270 . G A 941.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.318;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.939;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.91;ReadPosRankSum=-0.776;SOR=0.313 GT:AD:DP:GQ:PL 0/1:11,24:35:99:970,0,422 chr1 160879292 . A G 1092.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.271;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.25;ReadPosRankSum=1.559;SOR=0.941 GT:AD:DP:GQ:PL 0/1:19,28:47:99:1121,0,633 chr1 160879577 . 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T C 3897.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.404;ClippingRankSum=0.000;DP=304;ExcessHet=3.0103;FS=0.881;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.86;ReadPosRankSum=-0.234;SOR=0.635 GT:AD:DP:GQ:PL 0/1:147,156:303:99:3926,0,3695 chr1 160881744 . A G 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=0.004;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:259,0,134 chr1 160881774 . C G 467.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.575;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.99;ReadPosRankSum=-0.053;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,14:18:96:496,0,96 chr1 160881829 . 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C T 4306.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.729;ClippingRankSum=0.000;DP=379;ExcessHet=3.0103;FS=0.377;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.39;ReadPosRankSum=-0.362;SOR=0.661 GT:AD:DP:GQ:PL 0/1:206,172:378:99:4335,0,5539 chr1 160882256 . T C 3867.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.143;ClippingRankSum=0.000;DP=338;ExcessHet=3.0103;FS=1.829;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.48;ReadPosRankSum=1.035;SOR=0.808 GT:AD:DP:GQ:PL 0/1:178,159:337:99:3896,0,4514 chr1 160882377 . C T 1092.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.844;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=3.266;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.61;ReadPosRankSum=-0.934;SOR=0.173 GT:AD:DP:GQ:PL 0/1:37,33:70:99:1121,0,1331 chr1 160884736 . G A 360.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.463;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=2.010;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.02;ReadPosRankSum=0.804;SOR=0.213 GT:AD:DP:GQ:PL 0/1:21,15:36:99:389,0,735 chr1 160948112 . T C 757.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.796;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=3.811;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.12;ReadPosRankSum=-0.089;SOR=1.765 GT:AD:DP:GQ:PL 0/1:24,23:47:99:786,0,654 chr1 160951019 . A G 2556.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.762;ClippingRankSum=0.000;DP=193;ExcessHet=3.0103;FS=7.230;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.32;ReadPosRankSum=-0.635;SOR=1.162 GT:AD:DP:GQ:PL 0/1:92,100:192:99:2585,0,2389 chr1 160951023 . A G 7842.77 PASS AC=2;AF=1.00;AN=2;DP=205;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.76;SOR=1.066 GT:AD:DP:GQ:PL 1/1:0,205:205:99:7871,616,0 chr1 160951176 . C T 3697.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.927;ClippingRankSum=0.000;DP=236;ExcessHet=3.0103;FS=0.485;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.67;ReadPosRankSum=-0.330;SOR=0.750 GT:AD:DP:GQ:PL 0/1:116,120:236:99:3726,0,3411 chr1 160951440 . T G 1784.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.211;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=3.015;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.66;ReadPosRankSum=-1.111;SOR=2.053 GT:AD:DP:GQ:PL 0/1:62,52:114:99:1813,0,2174 chr1 160951570 . G C 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.253;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr1 160952405 . A G 253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.629;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.93;ReadPosRankSum=-1.403;SOR=0.593 GT:AD:DP:GQ:PL 0/1:9,8:17:99:282,0,313 chr1 160974664 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 160976169 . G A 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr1 160976206 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 160976288 . C T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.126;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 160998819 . G A 1797.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.100;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=1.289;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.99;ReadPosRankSum=0.629;SOR=0.589 GT:AD:DP:GQ:PL 0/1:81,69:150:99:1826,0,2087 chr1 160999320 . T C 2466.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.802;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=5.423;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.91;ReadPosRankSum=-1.445;SOR=0.378 GT:AD:DP:GQ:PL 0/1:66,89:155:99:2495,0,1883 chr1 160999795 . C T 3367.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.132;ClippingRankSum=0.000;DP=257;ExcessHet=3.0103;FS=5.011;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=2.455;SOR=0.464 GT:AD:DP:GQ:PL 0/1:129,128:257:99:3396,0,3474 chr1 161000140 . A C 3661.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.610;ClippingRankSum=0.000;DP=259;ExcessHet=3.0103;FS=2.844;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.14;ReadPosRankSum=-2.893;SOR=0.879 GT:AD:DP:GQ:PL 0/1:132,127:259:99:3690,0,3641 chr1 161001178 . G A 2292.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.286;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=4.108;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.15;ReadPosRankSum=1.563;SOR=1.055 GT:AD:DP:GQ:PL 0/1:64,78:142:99:2321,0,1872 chr1 161001225 . G C 1757.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.828;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=2.493;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.28;ReadPosRankSum=1.146;SOR=0.522 GT:AD:DP:GQ:PL 0/1:55,53:108:99:1786,0,1744 chr1 161001356 . A G 3720.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.595;ClippingRankSum=0.000;DP=225;ExcessHet=3.0103;FS=3.753;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.54;ReadPosRankSum=-0.391;SOR=0.500 GT:AD:DP:GQ:PL 0/1:124,101:225:99:3749,0,7523 chr1 161001365 . G C 3856.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.343;ClippingRankSum=0.000;DP=231;ExcessHet=3.0103;FS=4.562;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.70;ReadPosRankSum=-0.199;SOR=0.470 GT:AD:DP:GQ:PL 0/1:130,101:231:99:3885,0,7532 chr1 161021116 . G A 3486.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.480;ClippingRankSum=0.000;DP=267;ExcessHet=3.0103;FS=1.571;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.06;ReadPosRankSum=0.309;SOR=0.811 GT:AD:DP:GQ:PL 0/1:133,134:267:99:3515,0,3599 chr1 161037536 . G C 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.56;ReadPosRankSum=0.682;SOR=0.269 GT:AD:DP:GQ:PL 0/1:8,4:12:99:131,0,298 chr1 161037984 . G C 2895.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.243;ClippingRankSum=0.000;DP=260;ExcessHet=3.0103;FS=1.557;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.14;ReadPosRankSum=-1.473;SOR=0.829 GT:AD:DP:GQ:PL 0/1:153,107:260:99:2924,0,4284 chr1 161039733 . G A 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=-0.998;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:218,0,176 chr1 161040972 . C T 638.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.656;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=0.422;SOR=1.085 GT:AD:DP:GQ:PL 0/1:32,21:53:99:667,0,1055 chr1 161040984 . A G 539.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.040;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.17;ReadPosRankSum=-1.260;SOR=0.478 GT:AD:DP:GQ:PL 0/1:23,18:41:99:568,0,779 chr1 161041001 . C T 308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.427;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.03;ReadPosRankSum=-1.534;SOR=0.350 GT:AD:DP:GQ:PL 0/1:17,11:28:99:337,0,592 chr1 161041527 . A G 605.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.364;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=1.535;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.53;ReadPosRankSum=1.242;SOR=1.096 GT:AD:DP:GQ:PL 0/1:21,18:39:99:634,0,726 chr1 161041565 . G C 498.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.099;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=5.649;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.20;ReadPosRankSum=1.014;SOR=1.378 GT:AD:DP:GQ:PL 0/1:14,15:29:99:527,0,483 chr1 161041926 . G C 1263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.280;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.51;ReadPosRankSum=-0.250;SOR=0.709 GT:AD:DP:GQ:PL 0/1:55,46:101:99:1292,0,1657 chr1 161042800 . G A 979.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.427;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=3.597;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.06;ReadPosRankSum=-0.250;SOR=0.317 GT:AD:DP:GQ:PL 0/1:27,34:61:99:1008,0,842 chr1 161043331 . C T 1413.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.804;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=4.796;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.46;ReadPosRankSum=0.520;SOR=0.679 GT:AD:DP:GQ:PL 0/1:55,50:105:99:1442,0,1459 chr1 161049250 . G C 3099.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.068;ClippingRankSum=0.000;DP=230;ExcessHet=3.0103;FS=4.565;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.54;ReadPosRankSum=-0.458;SOR=0.982 GT:AD:DP:GQ:PL 0/1:113,116:229:99:3128,0,3102 chr1 161051207 . C T 477.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.941;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=3.142;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.93;ReadPosRankSum=-0.282;SOR=0.105 GT:AD:DP:GQ:PL 0/1:14,16:30:99:506,0,495 chr1 161052103 . G C 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.619;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.85;ReadPosRankSum=0.619;SOR=1.445 GT:AD:DP:GQ:PL 0/1:6,2:8:59:59,0,240 chr1 161052590 . G A 3193.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.720;ClippingRankSum=0.000;DP=263;ExcessHet=3.0103;FS=3.383;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.14;ReadPosRankSum=0.044;SOR=0.859 GT:AD:DP:GQ:PL 0/1:138,125:263:99:3222,0,3522 chr1 161052849 . C G 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=0.674;SOR=1.447 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,109 chr1 161054992 . C T 639.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.193;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.06;ReadPosRankSum=0.011;SOR=0.735 GT:AD:DP:GQ:PL 0/1:27,22:49:99:668,0,844 chr1 161055032 . A C 245.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.29;ReadPosRankSum=-0.570;SOR=0.392 GT:AD:DP:GQ:PL 0/1:12,8:20:99:274,0,441 chr1 161073945 . A C 702.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.432;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.436;SOR=0.631 GT:AD:DP:GQ:PL 0/1:36,27:63:99:731,0,1074 chr1 161073974 . G A 433.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.311;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.58;ReadPosRankSum=0.266;SOR=0.693 GT:AD:DP:GQ:PL 0/1:25,16:41:99:462,0,804 chr1 161079568 . G A 867.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.608;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.921;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=1.873;SOR=0.856 GT:AD:DP:GQ:PL 0/1:37,31:68:99:896,0,1069 chr1 161081736 . A G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.11;ReadPosRankSum=0.000;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,4:7:70:78,0,70 chr1 161081768 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.11;ReadPosRankSum=0.000;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,4:7:70:78,0,70 chr1 161086665 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 161087638 . G A 109.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.98;ReadPosRankSum=0.431;SOR=1.329 GT:AD:DP:GQ:PL 0/1:4,6:10:69:138,0,69 chr1 161098329 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 161098450 . G A 936.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.17;SOR=4.091 GT:AD:DP:GQ:PL 1/1:0,24:24:72:965,72,0 chr1 161099046 . A C 3201.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.440;ClippingRankSum=0.000;DP=251;ExcessHet=3.0103;FS=0.459;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=0.997;SOR=0.655 GT:AD:DP:GQ:PL 0/1:135,116:251:99:3230,0,3663 chr1 161116069 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 161116071 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 161118793 . T G 2647.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.457;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=2.805;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.22;ReadPosRankSum=-0.300;SOR=0.483 GT:AD:DP:GQ:PL 0/1:77,97:174:99:2676,0,2097 chr1 161122971 . A G 932.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.273;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=2.881;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.36;ReadPosRankSum=2.654;SOR=0.417 GT:AD:DP:GQ:PL 0/1:54,36:90:99:961,0,1442 chr1 161124400 . A G 3247.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.106;ClippingRankSum=0.000;DP=242;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.42;ReadPosRankSum=-0.934;SOR=0.678 GT:AD:DP:GQ:PL 0/1:123,119:242:99:3276,0,3418 chr1 161132100 . A C 253.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.72;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:282,24,0 chr1 161134669 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 161137391 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 161156851 . T C 735.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.229;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.15;ReadPosRankSum=-0.364;SOR=0.492 GT:AD:DP:GQ:PL 0/1:26,26:52:99:764,0,769 chr1 161156915 . A G 1529.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.356;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=0.635;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.48;ReadPosRankSum=0.100;SOR=0.770 GT:AD:DP:GQ:PL 0/1:82,64:146:99:1558,0,2062 chr1 161157185 . C G 3828.77 PASS AC=2;AF=1.00;AN=2;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=1.140 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3857,348,0 chr1 161167053 . C G 6001.77 PASS AC=2;AF=1.00;AN=2;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.54;SOR=1.666 GT:AD:DP:GQ:PL 1/1:0,170:170:99:6030,511,0 chr1 161169948 . G A 2562.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.573;ClippingRankSum=0.000;DP=217;ExcessHet=3.0103;FS=1.108;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=1.445;SOR=0.812 GT:AD:DP:GQ:PL 0/1:114,102:216:99:2591,0,3055 chr1 161170040 . G A 977.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.749;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=1.605;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.58;ReadPosRankSum=0.146;SOR=1.289 GT:AD:DP:GQ:PL 0/1:41,31:72:99:1006,0,1352 chr1 161170161 . C T 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.79;ReadPosRankSum=0.189;SOR=0.838 GT:AD:DP:GQ:PL 0/1:3,3:6:99:105,0,107 chr1 161171642 . C G 219.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.006;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.21;ReadPosRankSum=-0.061;SOR=0.512 GT:AD:DP:GQ:PL 0/1:10,8:18:99:248,0,364 chr1 161173522 . T C 809.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.222;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.57;ReadPosRankSum=0.713;SOR=0.589 GT:AD:DP:GQ:PL 0/1:38,32:70:99:838,0,1059 chr1 161174011 . G A 4126.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.014;ClippingRankSum=0.000;DP=349;ExcessHet=3.0103;FS=0.815;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=-1.856;SOR=0.644 GT:AD:DP:GQ:PL 0/1:173,175:348:99:4155,0,4130 chr1 161174143 . T C 869.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.423;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=1.634;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.43;ReadPosRankSum=0.624;SOR=0.392 GT:AD:DP:GQ:PL 0/1:41,29:70:99:898,0,1361 chr1 161174179 . A G 1098.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.73;SOR=3.841 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1127,87,0 chr1 161175215 . C T 1178.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.096;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=3.283;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.71;ReadPosRankSum=-0.630;SOR=0.387 GT:AD:DP:GQ:PL 0/1:40,46:86:99:1207,0,1173 chr1 161182054 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 161191082 . T C 90.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.372;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=2.769;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.67;ReadPosRankSum=-1.185;SOR=1.609 GT:AD:DP:GQ:PL 0/1:12,4:16:99:119,0,379 chr1 161191494 . G C 3406.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.383;ClippingRankSum=0.000;DP=280;ExcessHet=3.0103;FS=0.930;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.17;ReadPosRankSum=-2.828;SOR=0.609 GT:AD:DP:GQ:PL 0/1:151,129:280:99:3435,0,4198 chr1 161192383 . G A 2209.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.00;SOR=1.875 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2238,195,0 chr1 161193247 . T C 2024.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.53;SOR=2.604 GT:AD:DP:GQ:PL 1/1:0,57:57:99:2053,171,0 chr1 161193843 . C T 5614.77 PASS AC=2;AF=1.00;AN=2;DP=178;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.54;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,178:178:99:5643,533,0 chr1 161194376 . A G 1537.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.05;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1566,120,0 chr1 161196933 . G T 1394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.034;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=3.615;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.72;ReadPosRankSum=-1.033;SOR=1.096 GT:AD:DP:GQ:PL 0/1:63,56:119:99:1423,0,1791 chr1 161197908 . T G 2149.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.15;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2178,174,0 chr1 161202443 . C A 1657.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.471;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.54;ReadPosRankSum=0.622;SOR=0.625 GT:AD:DP:GQ:PL 0/1:57,57:114:99:1686,0,1546 chr1 161202735 . C T 306.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=8.113;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.05;ReadPosRankSum=-0.459;SOR=3.442 GT:AD:DP:GQ:PL 0/1:7,10:17:99:335,0,173 chr1 161206347 . A G 9603.77 PASS AC=2;AF=1.00;AN=2;DP=280;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.55;SOR=1.892 GT:AD:DP:GQ:PL 1/1:0,278:278:99:9632,835,0 chr1 161210087 . G A 4663.77 PASS AC=2;AF=1.00;AN=2;DP=142;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.08;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,141:141:99:4692,423,0 chr1 161212694 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 161213726 . C T 1468.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.837;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=2.961;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.28;ReadPosRankSum=-0.849;SOR=0.434 GT:AD:DP:GQ:PL 0/1:34,51:85:99:1497,0,1028 chr1 161215085 . A G 248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.633;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=6.990;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.58;ReadPosRankSum=0.417;SOR=3.056 GT:AD:DP:GQ:PL 0/1:7,8:15:99:277,0,176 chr1 161219146 . T C 213.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.25;ReadPosRankSum=-0.235;SOR=0.582 GT:AD:DP:GQ:PL 0/1:8,7:15:99:242,0,289 chr1 161221438 . G A 2116.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.63;SOR=5.709 GT:AD:DP:GQ:PL 1/1:0,53:53:99:2145,159,0 chr1 161221549 . C T 2023.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.002;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=0.568;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=-1.435;SOR=0.759 GT:AD:DP:GQ:PL 0/1:79,88:167:99:2052,0,1794 chr1 161221671 . T C 284.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.848;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=1.721;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.78;SOR=1.179 GT:AD:DP:GQ:PL 0/1:23,19:42:99:313,0,395 chr1 161221672 . T C 273.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.873;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.52;SOR=0.504 GT:AD:DP:GQ:PL 0/1:23,19:42:99:302,0,444 chr1 161221732 . A G 578.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.04;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:607,42,0 chr1 161221765 . G A 275.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.58;ReadPosRankSum=-0.967;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,8:10:53:304,0,53 chr1 161222526 . G A 951.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.031;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.33;ReadPosRankSum=-0.867;SOR=0.593 GT:AD:DP:GQ:PL 0/1:47,37:84:99:980,0,1314 chr1 161222721 . C G 326.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=3.736;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.14;ReadPosRankSum=-1.564;SOR=2.494 GT:AD:DP:GQ:PL 0/1:3,10:13:86:355,0,86 chr1 161226376 . A C 3203.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.82;SOR=2.154 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3232,276,0 chr1 161230697 . C A 1272.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.81;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1301,102,0 chr1 161231560 . G T 896.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.55;SOR=2.636 GT:AD:DP:GQ:PL 1/1:0,21:21:63:925,63,0 chr1 161231562 . G A 896.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.16;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,20:20:63:925,63,0 chr1 161232815 . G A 6759.77 PASS AC=2;AF=1.00;AN=2;DP=209;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.34;SOR=1.057 GT:AD:DP:GQ:PL 1/1:0,209:209:99:6788,627,0 chr1 161235116 . G A 148.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.858;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.83;ReadPosRankSum=0.830;SOR=0.976 GT:AD:DP:GQ:PL 0/1:11,8:19:99:177,0,232 chr1 161235260 . T C 230.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.85;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:259,24,0 chr1 161236108 . G T 1337.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.137;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=1.930;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.23;ReadPosRankSum=0.585;SOR=1.047 GT:AD:DP:GQ:PL 0/1:47,47:94:99:1366,0,1369 chr1 161239138 . A T 279.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.995;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.98;ReadPosRankSum=2.339;SOR=0.593 GT:AD:DP:GQ:PL 0/1:6,8:14:99:308,0,300 chr1 161239374 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 161257828 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr1 161257834 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr1 161258484 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 161259010 . C T 881.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.260;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.29;ReadPosRankSum=-0.211;SOR=0.610 GT:AD:DP:GQ:PL 0/1:19,32:51:99:910,0,538 chr1 161259053 . G A 346.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.981;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.547;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.91;ReadPosRankSum=1.446;SOR=0.404 GT:AD:DP:GQ:PL 0/1:20,15:35:99:375,0,662 chr1 161262114 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 161262161 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 161283867 . C T 1084.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.848;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=3.708;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.22;ReadPosRankSum=2.084;SOR=1.483 GT:AD:DP:GQ:PL 0/1:31,32:63:99:1113,0,986 chr1 161299367 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 161306644 . A G 4494.77 PASS AC=2;AF=1.00;AN=2;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,116:116:99:4523,349,0 chr1 161440254 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.01;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 161440256 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.01;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 161440272 . G T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.34;QD=34.12;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 161440273 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.34;QD=31.48;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 161440275 . C A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.34;QD=28.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 161440332 . C A 65.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.34;QD=21.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:93,9,0 chr1 161440668 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 161440746 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 161440864 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.15;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 161440900 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.82;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 161509955 . A G 3673.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.456;ClippingRankSum=0.000;DP=314;ExcessHet=3.0103;FS=0.410;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.70;ReadPosRankSum=0.182;SOR=0.654 GT:AD:DP:GQ:PL 0/1:163,151:314:99:3702,0,4121 chr1 161511771 . C T 107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.296;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=2.480;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.29;ReadPosRankSum=-0.869;SOR=1.981 GT:AD:DP:GQ:PL 0/1:8,5:13:99:136,0,227 chr1 161511953 . A G 160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.335;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.62;ReadPosRankSum=0.191;SOR=1.179 GT:AD:DP:GQ:PL 0/1:6,5:11:99:189,0,473 chr1 161511962 . A C 160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.349;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.40;ReadPosRankSum=0.057;SOR=0.941 GT:AD:DP:GQ:PL 0/1:7,5:12:99:189,0,473 chr1 161518073 . C T 1372.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.112;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=1.526;MLEAC=1;MLEAF=0.500;MQ=48.48;MQRankSum=1.011;QD=12.15;ReadPosRankSum=-1.177;SOR=0.862 GT:AD:DP:GQ:PL 0/1:60,53:113:99:1401,0,1539 chr1 161518227 . T C 1300.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.552;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.73;MQRankSum=-0.354;QD=13.69;ReadPosRankSum=0.318;SOR=0.756 GT:AD:DP:GQ:PL 0/1:45,50:95:99:1329,0,1129 chr1 161523925 . A C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.27;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 161523933 . A G 132.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:160,12,0 chr1 161524521 . G C 318.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.38;QD=27.96;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:347,24,0 chr1 161524532 . A C 93.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.191;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.72;MQRankSum=-1.044;QD=8.52;ReadPosRankSum=0.494;SOR=1.179 GT:AD:DP:GQ:PL 0/1:6,5:11:99:122,0,173 chr1 161525250 . C T 6203.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.114;ClippingRankSum=0.000;DP=455;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.12;MQRankSum=0.232;QD=13.63;ReadPosRankSum=-2.323;SOR=0.680 GT:AD:DP:GQ:PL 0/1:241,214:455:99:6232,0,6994 chr1 161525327 . C T 7662.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.037;ClippingRankSum=0.000;DP=658;ExcessHet=3.0103;FS=3.243;MLEAC=1;MLEAF=0.500;MQ=48.51;MQRankSum=-1.023;QD=11.65;ReadPosRankSum=0.632;SOR=0.934 GT:AD:DP:GQ:PL 0/1:355,303:658:99:7691,0,9494 chr1 161525687 . A T 14499.77 PASS AC=2;AF=1.00;AN=2;DP=427;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.77;QD=34.04;SOR=1.293 GT:AD:DP:GQ:PL 1/1:0,426:426:99:14528,1279,0 chr1 161526095 . T C 16191.77 PASS AC=2;AF=1.00;AN=2;DP=496;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.95;QD=32.64;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,496:496:99:16220,1485,0 chr1 161526344 . C G 3241.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.403;ClippingRankSum=0.000;DP=268;ExcessHet=3.0103;FS=0.937;MLEAC=1;MLEAF=0.500;MQ=59.88;MQRankSum=-0.360;QD=12.10;ReadPosRankSum=1.977;SOR=0.676 GT:AD:DP:GQ:PL 0/1:148,120:268:99:3270,0,4444 chr1 161526740 . C G 1328.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.912;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=6.134;MLEAC=1;MLEAF=0.500;MQ=59.61;MQRankSum=-1.810;QD=16.40;ReadPosRankSum=0.155;SOR=0.220 GT:AD:DP:GQ:PL 0/1:36,45:81:99:1357,0,1075 chr1 161528952 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 161528962 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 161538973 . T C 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 161544752 . A C 2439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.927;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=6.791;MLEAC=1;MLEAF=0.500;MQ=57.00;MQRankSum=-6.213;QD=15.25;ReadPosRankSum=0.960;SOR=1.368 GT:AD:DP:GQ:PL 0/1:82,78:160:99:2468,0,2451 chr1 161548546 . C T 22978.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.091;ClippingRankSum=0.000;DP=1239;ExcessHet=3.0103;FS=1.886;MLEAC=1;MLEAF=0.500;MQ=47.04;MQRankSum=-27.674;QD=18.58;ReadPosRankSum=-0.028;SOR=0.683 GT:AD:DP:GQ:PL 0/1:392,845:1237:99:23007,0,9031 chr1 161549621 . C A 347.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.84;ReadPosRankSum=0.392;SOR=1.765 GT:AD:DP:GQ:PL 0/1:4,10:14:99:376,0,125 chr1 161549650 . C T 595.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.175;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.40;MQRankSum=-0.653;QD=19.22;ReadPosRankSum=-0.942;SOR=0.346 GT:AD:DP:GQ:PL 0/1:13,18:31:99:624,0,450 chr1 161557098 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 161572474 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.28;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 161589292 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 161589466 . C T 2384.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.004;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.81;MQRankSum=0.000;QD=20.56;ReadPosRankSum=-0.652;SOR=0.811 GT:AD:DP:GQ:PL 0/1:42,74:116:99:2413,0,1223 chr1 161589537 . A G 9022.77 PASS AC=2;AF=1.00;AN=2;DP=272;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.91;QD=33.29;SOR=1.860 GT:AD:DP:GQ:PL 1/1:0,271:271:99:9051,813,0 chr1 161589781 . C T 4299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.036;ClippingRankSum=0.000;DP=211;ExcessHet=3.0103;FS=7.222;MLEAC=1;MLEAF=0.500;MQ=45.31;MQRankSum=0.544;QD=20.38;ReadPosRankSum=0.196;SOR=1.218 GT:AD:DP:GQ:PL 0/1:74,137:211:99:4328,0,1915 chr1 161589930 . G A 1030.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.651;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=7.619;MLEAC=1;MLEAF=0.500;MQ=59.82;MQRankSum=0.274;QD=16.11;ReadPosRankSum=0.360;SOR=1.725 GT:AD:DP:GQ:PL 0/1:28,36:64:99:1059,0,625 chr1 161589994 . A G 939.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.54;QD=28.22;SOR=4.091 GT:AD:DP:GQ:PL 1/1:0,24:24:72:968,72,0 chr1 161590103 . C G 32.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.31;MQRankSum=-0.674;QD=8.19;ReadPosRankSum=0.674;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:61:61,0,71 chr1 161591886 . T C 561.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.767;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=2.461;MLEAC=1;MLEAF=0.500;MQ=56.68;MQRankSum=-11.053;QD=3.96;ReadPosRankSum=0.130;SOR=1.054 GT:AD:DP:GQ:PL 0/1:119,23:142:99:590,0,7042 chr1 161591891 . C T 584.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.672;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=2.426;MLEAC=1;MLEAF=0.500;MQ=56.97;MQRankSum=-10.825;QD=3.75;ReadPosRankSum=0.289;SOR=1.019 GT:AD:DP:GQ:PL 0/1:131,25:156:99:613,0,7298 chr1 161593249 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.47;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 161594816 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.28;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 161595534 . C T 3515.77 PASS AC=2;AF=1.00;AN=2;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.77;QD=32.86;SOR=1.632 GT:AD:DP:GQ:PL 1/1:0,107:107:99:3544,321,0 chr1 161595689 . G A 3866.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.61;QD=31.96;SOR=1.495 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3895,363,0 chr1 161595915 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 161600025 . G C 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.93;QD=27.49;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr1 161605818 . C T 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr1 161605971 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 161607867 . G A 4050.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.076;ClippingRankSum=0.000;DP=495;ExcessHet=3.0103;FS=1.888;MLEAC=1;MLEAF=0.500;MQ=58.09;MQRankSum=-10.608;QD=8.20;ReadPosRankSum=0.185;SOR=0.855 GT:AD:DP:GQ:PL 0/1:330,164:494:99:4079,0,9857 chr1 161607879 . G A 18419.77 PASS AC=2;AF=1.00;AN=2;DP=486;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.04;QD=26.91;SOR=1.169 GT:AD:DP:GQ:PL 1/1:0,486:486:99:18448,1475,0 chr1 161617504 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=51.07;MQRankSum=-0.967;QD=17.59;ReadPosRankSum=0.000;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:81:81,0,116 chr1 161617516 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=51.07;MQRankSum=-0.967;QD=17.59;ReadPosRankSum=-0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:81:81,0,116 chr1 161617517 . T C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=51.07;MQRankSum=-0.967;QD=17.59;ReadPosRankSum=-0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:81:81,0,116 chr1 161624310 . C T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 161624436 . C T 2017.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.47;QD=28.66;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,52:52:99:2046,156,0 chr1 161624456 . G T 2635.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.24;QD=25.27;SOR=3.737 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2664,216,0 chr1 161624735 . G C 5548.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.48;QD=30.54;SOR=2.438 GT:AD:DP:GQ:PL 1/1:0,125:125:99:5577,376,0 chr1 161624736 . T G 5548.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.13;QD=31.82;SOR=2.381 GT:AD:DP:GQ:PL 1/1:0,122:122:99:5577,376,0 chr1 161624771 . C G 2326.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.85;QD=27.85;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2355,198,0 chr1 161626493 . G A 10945.77 PASS AC=2;AF=1.00;AN=2;DP=290;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.16;QD=31.53;SOR=5.021 GT:AD:DP:GQ:PL 1/1:0,290:290:99:10974,871,0 chr1 161630679 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 161630687 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 161630954 . C T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.04;MQRankSum=-1.718;QD=10.82;ReadPosRankSum=0.328;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 161630997 . G C 530.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.85;QD=31.80;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:39:559,39,0 chr1 161631002 . A C 236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.155;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.11;MQRankSum=-3.531;QD=12.46;ReadPosRankSum=0.331;SOR=0.446 GT:AD:DP:GQ:PL 0/1:11,8:19:99:265,0,390 chr1 161631042 . G T 732.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.296;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.18;MQRankSum=0.922;QD=17.87;ReadPosRankSum=0.897;SOR=0.264 GT:AD:DP:GQ:PL 0/1:19,22:41:99:761,0,670 chr1 161631205 . C T 2248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.590;ClippingRankSum=0.000;DP=154;ExcessHet=3.0103;FS=1.283;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.60;ReadPosRankSum=0.075;SOR=0.554 GT:AD:DP:GQ:PL 0/1:67,87:154:99:2277,0,1685 chr1 161631328 . G C 2144.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.85;SOR=2.746 GT:AD:DP:GQ:PL 1/1:0,51:51:99:2173,156,0 chr1 161631343 . T C 1772.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.91;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1801,123,0 chr1 161631383 . A T 532.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.109;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.22;ReadPosRankSum=0.313;SOR=0.582 GT:AD:DP:GQ:PL 0/1:5,17:22:99:561,0,142 chr1 161631441 . A G 127.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.30;ReadPosRankSum=0.674;SOR=0.941 GT:AD:DP:GQ:PL 0/1:1,5:6:24:156,0,24 chr1 161673717 . C T 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=43.43;MQRankSum=-0.792;QD=4.72;ReadPosRankSum=-0.366;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,2:8:66:66,0,243 chr1 161673722 . T C 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.51;MQRankSum=-0.566;QD=5.40;ReadPosRankSum=-1.465;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:66:66,0,243 chr1 161673737 . A C 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.59;QD=29.44;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr1 161673739 . A G 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.59;QD=34.20;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr1 161675469 . T G 143.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.78;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:172,15,0 chr1 161677743 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.51;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 161685053 . C G 503.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.49;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,16:16:48:532,48,0 chr1 161707114 . T C 1053.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.35;SOR=4.332 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1082,81,0 chr1 161707180 . A G 3142.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.16;SOR=2.571 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3171,276,0 chr1 161707560 . A G 639.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.18;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:668,48,0 chr1 161707599 . G A 345.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.62;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:374,27,0 chr1 161708464 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 161708521 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 161710468 . G A 3926.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.72;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3955,360,0 chr1 161711078 . T C 1805.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.44;SOR=1.697 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1834,162,0 chr1 161713346 . G A 6285.77 PASS AC=2;AF=1.00;AN=2;DP=194;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.40;SOR=1.132 GT:AD:DP:GQ:PL 1/1:0,194:194:99:6314,582,0 chr1 161722364 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 161725591 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 161725849 . G T 7670.77 PASS AC=2;AF=1.00;AN=2;DP=225;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.09;SOR=1.028 GT:AD:DP:GQ:PL 1/1:0,225:225:99:7699,675,0 chr1 161726298 . T C 7780.77 PASS AC=2;AF=1.00;AN=2;DP=231;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.68;SOR=1.159 GT:AD:DP:GQ:PL 1/1:0,231:231:99:7809,694,0 chr1 161726992 . G C 1321.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.89;SOR=2.362 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1350,117,0 chr1 161727208 . C G 366.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.34;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,11:11:32:395,32,0 chr1 161730116 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 161730123 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 161730131 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 161752482 . C A 1456.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.11;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1485,132,0 chr1 161766245 . A G 5222.77 PASS AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.35;SOR=1.691 GT:AD:DP:GQ:PL 1/1:0,147:147:99:5251,441,0 chr1 161771484 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 161853169 . C T 670.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.54;SOR=2.531 GT:AD:DP:GQ:PL 1/1:0,20:20:60:699,60,0 chr1 161853221 . T A 1095.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.02;SOR=1.839 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1124,93,0 chr1 161863044 . G A 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.88;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr1 161863052 . T G 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.91;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr1 161863443 . G A 963.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.93;SOR=5.058 GT:AD:DP:GQ:PL 1/1:0,25:25:75:992,75,0 chr1 161936002 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 161958212 . C T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.31;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 161958537 . A G 3735.77 PASS AC=2;AF=1.00;AN=2;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.77;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3764,342,0 chr1 161958778 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 161959445 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 161970464 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 161971920 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.38;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 161984575 . C G 521.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.70;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:550,42,0 chr1 161984658 . C T 1320.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.95;SOR=4.743 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1349,99,0 chr1 161997891 . A G 8933.77 PASS AC=2;AF=1.00;AN=2;DP=268;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.33;SOR=1.480 GT:AD:DP:GQ:PL 1/1:0,268:268:99:8962,804,0 chr1 161998507 . T G 429.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.45;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:458,33,0 chr1 161999846 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 162004794 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 162004851 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 162017595 . G A 330.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.049;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.03;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:11,11:22:99:359,0,355 chr1 162019628 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.06;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 162024053 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 162073637 . T G 144.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.98;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:173,15,0 chr1 162144384 . G A 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 162158059 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 162166427 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 162170379 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 162175169 . G C 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 162175176 . A G 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 162287085 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 162287243 . C G 655.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.758;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=4.642;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.25;ReadPosRankSum=0.227;SOR=0.266 GT:AD:DP:GQ:PL 0/1:17,26:43:99:684,0,433 chr1 162300265 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 162313877 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.85;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 162313884 . T A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.95;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 162314121 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 162324154 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 162324157 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 162324159 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 162332075 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 162343728 . A G 4342.77 PASS AC=2;AF=1.00;AN=2;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.93;SOR=2.124 GT:AD:DP:GQ:PL 1/1:0,128:128:99:4371,384,0 chr1 162343807 . T C 8468.77 PASS AC=2;AF=1.00;AN=2;DP=256;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.21;SOR=1.314 GT:AD:DP:GQ:PL 1/1:0,255:255:99:8497,766,0 chr1 162343945 . C T 8121.77 PASS AC=2;AF=1.00;AN=2;DP=243;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.42;SOR=1.486 GT:AD:DP:GQ:PL 1/1:0,243:243:99:8150,730,0 chr1 162350216 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 162361137 . C G 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=0.792;SOR=1.329 GT:AD:DP:GQ:PL 0/1:6,4:10:99:137,0,186 chr1 162365262 . C T 1234.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.213;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=2.346;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.46;ReadPosRankSum=0.610;SOR=0.411 GT:AD:DP:GQ:PL 0/1:32,43:75:99:1263,0,895 chr1 162365466 . C T 2585.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.254;ClippingRankSum=0.000;DP=205;ExcessHet=3.0103;FS=1.075;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.61;ReadPosRankSum=0.415;SOR=0.614 GT:AD:DP:GQ:PL 0/1:107,98:205:99:2614,0,2917 chr1 162365634 . T C 721.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.213;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.524;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.44;ReadPosRankSum=1.644;SOR=1.179 GT:AD:DP:GQ:PL 0/1:26,24:50:99:750,0,753 chr1 162365710 . T C 276.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.60;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:305,24,0 chr1 162373984 . A G 3394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.671;ClippingRankSum=0.000;DP=277;ExcessHet=3.0103;FS=2.215;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.30;ReadPosRankSum=0.394;SOR=0.873 GT:AD:DP:GQ:PL 0/1:151,125:276:99:3423,0,4124 chr1 162374279 . G A 6603.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.464;ClippingRankSum=0.000;DP=460;ExcessHet=3.0103;FS=0.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.36;ReadPosRankSum=-0.357;SOR=0.763 GT:AD:DP:GQ:PL 0/1:217,243:460:99:6632,0,5872 chr1 162374312 . C T 6242.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.306;ClippingRankSum=0.000;DP=493;ExcessHet=3.0103;FS=0.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.66;ReadPosRankSum=1.751;SOR=0.615 GT:AD:DP:GQ:PL 0/1:258,235:493:99:6271,0,6771 chr1 162374600 . A G 5881.77 PASS AC=2;AF=1.00;AN=2;DP=163;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.94;SOR=2.499 GT:AD:DP:GQ:PL 1/1:0,163:163:99:5910,490,0 chr1 162375301 . G A 4675.77 PASS AC=2;AF=1.00;AN=2;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.21;SOR=2.488 GT:AD:DP:GQ:PL 1/1:0,132:132:99:4704,396,0 chr1 162375682 . C T 1597.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.11;SOR=2.935 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1626,135,0 chr1 162375839 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 162378872 . C T 1460.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1489,129,0 chr1 162381665 . G T 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.00;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr1 162382504 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 162383029 . A G 1061.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.49;SOR=5.211 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1090,81,0 chr1 162384735 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 162387863 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 162397445 . G A 719.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.72;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,22:22:66:748,66,0 chr1 162402928 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 162424409 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 162497224 . C G 2565.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.171;ClippingRankSum=0.000;DP=223;ExcessHet=3.0103;FS=1.190;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.51;ReadPosRankSum=1.090;SOR=0.566 GT:AD:DP:GQ:PL 0/1:128,95:223:99:2594,0,3703 chr1 162499799 . A G 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=0.180;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:31:188,0,31 chr1 162517940 . T C 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=1.068;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,187 chr1 162588915 . C T 158.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.049;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.82;ReadPosRankSum=0.279;SOR=0.941 GT:AD:DP:GQ:PL 0/1:11,7:18:99:187,0,371 chr1 162592985 . A G 506.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.76;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:535,42,0 chr1 162628354 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 162661168 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 162722878 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 162753056 . C G 4724.77 PASS AC=2;AF=1.00;AN=2;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=2.488 GT:AD:DP:GQ:PL 1/1:0,132:132:99:4753,395,0 chr1 162755865 . A C 903.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.91;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,25:25:75:932,75,0 chr1 162761614 . C T 964.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.98;SOR=5.058 GT:AD:DP:GQ:PL 1/1:0,25:25:75:993,75,0 chr1 162767066 . C A 736.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.33;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:765,51,0 chr1 162767326 . C G 1458.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.455;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=-0.457;SOR=0.741 GT:AD:DP:GQ:PL 0/1:58,52:110:99:1487,0,1553 chr1 162767548 . G C 347.78 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.98;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 162767575 . G A 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=0.366;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,187 chr1 162770537 . T C 6534.77 PASS AC=2;AF=1.00;AN=2;DP=197;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.17;SOR=1.349 GT:AD:DP:GQ:PL 1/1:0,197:197:99:6563,591,0 chr1 162772327 . C T 1814.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.264;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=2.294;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.73;ReadPosRankSum=-0.292;SOR=0.460 GT:AD:DP:GQ:PL 0/1:33,59:92:99:1843,0,1029 chr1 162772390 . T C 1389.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.74;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1418,119,0 chr1 162773628 . G T 1918.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.46;SOR=1.498 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1947,183,0 chr1 162778357 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 162778798 . C A 1314.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.07;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1343,108,0 chr1 162779971 . T C 384.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.39;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:413,30,0 chr1 162784422 . G A 317.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.074;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=46.37;MQRankSum=-0.238;QD=8.83;ReadPosRankSum=0.077;SOR=0.591 GT:AD:DP:GQ:PL 0/1:23,13:36:99:346,0,644 chr1 162790764 . T C 14140.77 PASS AC=2;AF=1.00;AN=2;DP=430;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.62;QD=32.89;SOR=1.544 GT:AD:DP:GQ:PL 1/1:0,430:430:99:14169,1291,0 chr1 162795685 . G C 912.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.94;QD=28.52;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:96:941,96,0 chr1 162797020 . G A 95.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.67;QD=31.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:123,9,0 chr1 162797031 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.52;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 162817453 . T A 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.067;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=7.404;MLEAC=1;MLEAF=0.500;MQ=51.20;MQRankSum=-3.067;QD=16.34;ReadPosRankSum=0.748;SOR=3.352 GT:AD:DP:GQ:PL 0/1:5,6:11:61:208,0,61 chr1 162852981 . A C 470.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.585;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=5.269;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.21;ReadPosRankSum=-1.575;SOR=0.105 GT:AD:DP:GQ:PL 0/1:24,18:42:99:499,0,842 chr1 163047795 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 163056837 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 163056844 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 163056862 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 163068823 . C A 372.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.247;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=2.430;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.94;ReadPosRankSum=-1.801;SOR=1.609 GT:AD:DP:GQ:PL 0/1:10,12:22:99:401,0,317 chr1 163068894 . C A 708.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.590;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=1.131;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.43;ReadPosRankSum=-0.316;SOR=0.883 GT:AD:DP:GQ:PL 0/1:32,25:57:99:737,0,876 chr1 163069063 . G A 957.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.022;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=1.023;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.51;ReadPosRankSum=-0.045;SOR=0.491 GT:AD:DP:GQ:PL 0/1:28,38:66:99:986,0,672 chr1 163073298 . A G 795.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.60;SOR=2.030 GT:AD:DP:GQ:PL 1/1:0,23:23:69:824,69,0 chr1 163147561 . G T 2971.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.47;SOR=2.359 GT:AD:DP:GQ:PL 1/1:0,84:84:99:3000,252,0 chr1 163152738 . G C 645.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:51:674,51,0 chr1 163187336 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 163217473 . G A 212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.531;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.197;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.52;ReadPosRankSum=-0.261;SOR=1.402 GT:AD:DP:GQ:PL 0/1:10,7:17:99:241,0,264 chr1 163274850 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 163301603 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 163301613 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 163331943 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 163331947 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 163336580 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 163338154 . T C 533.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.132;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=7.045;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.41;ReadPosRankSum=0.518;SOR=2.546 GT:AD:DP:GQ:PL 0/1:11,18:29:99:562,0,270 chr1 163339429 . A T 287.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.157;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=1.301;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.99;ReadPosRankSum=-0.589;SOR=0.999 GT:AD:DP:GQ:PL 0/1:21,15:36:99:316,0,633 chr1 163339512 . C T 245.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.322;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.603;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.83;ReadPosRankSum=-0.119;SOR=1.085 GT:AD:DP:GQ:PL 0/1:15,10:25:99:274,0,381 chr1 163345560 . G C 104.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.48;ReadPosRankSum=-2.450;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:133,0,221 chr1 163347637 . T C 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-1.006;SOR=2.494 GT:AD:DP:GQ:PL 0/1:3,4:7:70:146,0,70 chr1 163519907 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 163628664 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 163638311 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 163885674 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 164020764 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 164061693 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 164105939 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 164196341 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 164265098 . A G 56.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=14.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:84,12,0 chr1 164331698 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 164342852 . C G 273.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.464;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.55;ReadPosRankSum=-1.245;SOR=1.329 GT:AD:DP:GQ:PL 0/1:5,9:14:99:302,0,183 chr1 164342854 . A G 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.91;ReadPosRankSum=1.245;SOR=0.307 GT:AD:DP:GQ:PL 0/1:9,5:14:99:167,0,363 chr1 164357216 . G C 87.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.308;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=6.021;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.16;ReadPosRankSum=-1.523;SOR=1.447 GT:AD:DP:GQ:PL 0/1:13,4:17:99:116,0,424 chr1 164357352 . T G 93.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.465;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.72;ReadPosRankSum=1.611;SOR=1.329 GT:AD:DP:GQ:PL 0/1:3,5:8:89:122,0,89 chr1 164380645 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 164500119 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 164500481 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 164560429 . G A 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-0.842;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 164563088 . T C 551.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.716;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=6.388;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.91;ReadPosRankSum=-1.140;SOR=0.049 GT:AD:DP:GQ:PL 0/1:18,19:37:99:580,0,617 chr1 164589440 . G A 115.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:143,12,0 chr1 164590299 . A G 867.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.561;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.25;ReadPosRankSum=-0.688;SOR=0.735 GT:AD:DP:GQ:PL 0/1:12,27:39:99:896,0,350 chr1 164599583 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 164611440 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 164678456 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 164687014 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 164690198 . A C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 164820207 . A G 755.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.35;SOR=1.931 GT:AD:DP:GQ:PL 1/1:0,22:22:66:784,66,0 chr1 164884410 . G C 290.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.457;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.30;ReadPosRankSum=0.578;SOR=1.609 GT:AD:DP:GQ:PL 0/1:10,9:19:99:319,0,326 chr1 165084890 . C T 43.79 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.95;ReadPosRankSum=0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:23:72,0,23 chr1 165091428 . C A 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=-0.431;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,4:6:31:115,0,31 chr1 165162730 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 165203979 . A G 5544.77 PASS AC=2;AF=1.00;AN=2;DP=173;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.05;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,173:173:99:5573,519,0 chr1 165206137 . G A 829.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.222;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=1.094;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.60;ReadPosRankSum=0.815;SOR=0.890 GT:AD:DP:GQ:PL 0/1:32,29:61:99:858,0,881 chr1 165206327 . T C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 165207933 . T C 382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.92;ReadPosRankSum=0.499;SOR=1.609 GT:AD:DP:GQ:PL 0/1:5,11:16:99:411,0,161 chr1 165210460 . A T 297.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.93;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:326,24,0 chr1 165210852 . T A 1182.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.485;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=1.630;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.85;ReadPosRankSum=-1.734;SOR=0.510 GT:AD:DP:GQ:PL 0/1:61,48:109:99:1211,0,1607 chr1 165235517 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 165249296 . A G 90.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.56;ReadPosRankSum=-0.114;SOR=0.269 GT:AD:DP:GQ:PL 0/1:8,4:12:99:119,0,298 chr1 165249555 . G A 2471.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.343;ClippingRankSum=0.000;DP=214;ExcessHet=3.0103;FS=4.725;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.55;ReadPosRankSum=0.630;SOR=0.573 GT:AD:DP:GQ:PL 0/1:117,97:214:99:2500,0,3334 chr1 165341162 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 165401163 . G C 344.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.015;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.42;ReadPosRankSum=0.699;SOR=0.929 GT:AD:DP:GQ:PL 0/1:7,14:21:99:373,0,196 chr1 165401238 . G C 581.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.078;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=3.009;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.54;ReadPosRankSum=-0.768;SOR=1.445 GT:AD:DP:GQ:PL 0/1:16,24:40:99:610,0,378 chr1 165401520 . G A 851.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.10;SOR=4.003 GT:AD:DP:GQ:PL 1/1:0,23:23:69:880,69,0 chr1 165406451 . C T 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.11;ReadPosRankSum=0.484;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:134,0,104 chr1 165408152 . T C 1320.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.97;SOR=3.737 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1349,105,0 chr1 165408315 . G A 4400.77 PASS AC=2;AF=1.00;AN=2;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.99;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,142:142:99:4429,426,0 chr1 165409496 . C T 503.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.934;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.82;SOR=0.846 GT:AD:DP:GQ:PL 0/1:16,18:34:99:532,0,368 chr1 165409755 . C T 768.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.220;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=-1.555;SOR=0.712 GT:AD:DP:GQ:PL 0/1:27,30:57:99:797,0,759 chr1 165417413 . G T 208.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.81;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:237,18,0 chr1 165419711 . G A 232.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.28;ReadPosRankSum=-1.054;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,7:10:63:261,0,63 chr1 165419955 . G A 2455.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.642;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=3.513;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.36;ReadPosRankSum=0.552;SOR=0.734 GT:AD:DP:GQ:PL 0/1:81,90:171:99:2484,0,2114 chr1 165420048 . C G 1448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.553;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=1.600;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.05;ReadPosRankSum=-0.455;SOR=0.529 GT:AD:DP:GQ:PL 0/1:56,55:111:99:1477,0,1458 chr1 165436820 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 165456874 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 165467601 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 165544202 . A C 249.80 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.62;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:21:278,21,0 chr1 165544219 . A T 495.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,11:11:39:524,39,0 chr1 165544226 . C G 664.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.91;SOR=1.739 GT:AD:DP:GQ:PL 1/1:0,17:17:51:693,51,0 chr1 165550939 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 165563768 . C A 7577.77 PASS AC=2;AF=1.00;AN=2;DP=236;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.11;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,236:236:99:7606,708,0 chr1 165563951 . A C 936.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.07;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,24:24:72:965,72,0 chr1 165563993 . G A 104.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.875;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=7.123;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.52;ReadPosRankSum=-0.718;SOR=3.244 GT:AD:DP:GQ:PL 0/1:7,4:11:99:133,0,225 chr1 165564743 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 165598234 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 165632229 . G A 2257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.141;ClippingRankSum=0.000;DP=145;ExcessHet=3.0103;FS=0.627;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.57;ReadPosRankSum=0.205;SOR=0.600 GT:AD:DP:GQ:PL 0/1:65,80:145:99:2286,0,1763 chr1 165650187 . G T 155.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.077;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.23;ReadPosRankSum=-0.444;SOR=0.323 GT:AD:DP:GQ:PL 0/1:18,7:25:99:184,0,577 chr1 165655562 . G T 408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.224;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.03;ReadPosRankSum=1.612;SOR=0.425 GT:AD:DP:GQ:PL 0/1:11,13:24:99:437,0,345 chr1 165661135 . T G 158.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.46;ReadPosRankSum=-0.967;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:187,0,24 chr1 165661238 . C T 580.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.124;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.89;ReadPosRankSum=0.670;SOR=0.641 GT:AD:DP:GQ:PL 0/1:20,19:39:99:609,0,582 chr1 165661258 . T C 769.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.514;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=1.193;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.27;ReadPosRankSum=-1.157;SOR=0.411 GT:AD:DP:GQ:PL 0/1:29,29:58:99:798,0,831 chr1 165661461 . A G 897.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.141;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.70;ReadPosRankSum=1.018;SOR=0.586 GT:AD:DP:GQ:PL 0/1:18,30:48:99:926,0,502 chr1 165665188 . C G 885.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.214;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=0.819;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.13;ReadPosRankSum=0.231;SOR=0.560 GT:AD:DP:GQ:PL 0/1:58,39:97:99:914,0,1523 chr1 165667512 . A G 248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.856;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.343;SOR=0.512 GT:AD:DP:GQ:PL 0/1:11,9:20:99:277,0,387 chr1 165678243 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 165678267 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 165679243 . A G 51.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.45;ReadPosRankSum=1.377;SOR=0.090 GT:AD:DP:GQ:PL 0/1:12,3:15:80:80,0,455 chr1 165679322 . T G 597.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.212;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=2.794;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.50;ReadPosRankSum=0.012;SOR=1.167 GT:AD:DP:GQ:PL 0/1:30,22:52:99:626,0,823 chr1 165679649 . G A 1153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.874;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=3.615;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.55;ReadPosRankSum=0.119;SOR=1.552 GT:AD:DP:GQ:PL 0/1:17,30:47:99:1182,0,867 chr1 165679657 . C G 1099.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.679;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.82;ReadPosRankSum=-0.050;SOR=1.125 GT:AD:DP:GQ:PL 0/1:14,27:41:99:1128,0,813 chr1 165680070 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.42;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 165681916 . T A 676.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.001;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.11;ReadPosRankSum=-0.640;SOR=0.606 GT:AD:DP:GQ:PL 0/1:22,20:42:99:705,0,780 chr1 165682265 . G C 942.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.478;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=9.619;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.46;ReadPosRankSum=-0.234;SOR=2.179 GT:AD:DP:GQ:PL 0/1:22,32:54:99:971,0,640 chr1 165683036 . A G 3213.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.312;ClippingRankSum=0.000;DP=217;ExcessHet=3.0103;FS=0.501;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.81;ReadPosRankSum=-0.985;SOR=0.637 GT:AD:DP:GQ:PL 0/1:99,118:217:99:3242,0,2586 chr1 165683208 . A G 1371.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.577;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=1.593;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.82;ReadPosRankSum=-0.451;SOR=1.317 GT:AD:DP:GQ:PL 0/1:34,43:77:99:1400,0,1030 chr1 165683331 . A G 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=0.524;SOR=0.368 GT:AD:DP:GQ:PL 0/1:2,4:6:66:115,0,66 chr1 165698544 . T G 3706.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.97;SOR=1.970 GT:AD:DP:GQ:PL 1/1:0,106:106:99:3735,318,0 chr1 165751986 . T C 336.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.826;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.04;ReadPosRankSum=-0.712;SOR=0.126 GT:AD:DP:GQ:PL 0/1:9,12:21:99:365,0,313 chr1 165768467 . C G 1591.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.605;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=6.094;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.05;ReadPosRankSum=-1.776;SOR=1.269 GT:AD:DP:GQ:PL 0/1:65,57:122:99:1620,0,1855 chr1 165774524 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 165890393 . C G 13308.77 PASS AC=2;AF=1.00;AN=2;DP=423;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.46;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,423:423:99:13337,1266,0 chr1 165890503 . G A 1588.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.714;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=5.144;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.19;ReadPosRankSum=0.600;SOR=0.304 GT:AD:DP:GQ:PL 0/1:53,59:112:99:1617,0,1672 chr1 165896063 . G A 807.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.350;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=4.228;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.93;ReadPosRankSum=0.230;SOR=1.675 GT:AD:DP:GQ:PL 0/1:33,25:58:99:836,0,1085 chr1 165896241 . G A 3887.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.391;ClippingRankSum=0.000;DP=301;ExcessHet=3.0103;FS=1.368;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.92;ReadPosRankSum=-1.095;SOR=0.688 GT:AD:DP:GQ:PL 0/1:156,145:301:99:3916,0,4068 chr1 165908102 . A T 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.19;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:65:65,0,71 chr1 165955382 . T G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.16;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 165955383 . G C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 165961562 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 166012453 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 166022801 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 166060733 . T C 3841.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.98;SOR=1.197 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3870,371,0 chr1 166060888 . A G 172.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.52;ReadPosRankSum=-0.803;SOR=0.399 GT:AD:DP:GQ:PL 0/1:9,6:15:99:201,0,331 chr1 166070661 . C G 4096.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.212;ClippingRankSum=0.000;DP=349;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.81;ReadPosRankSum=-0.901;SOR=0.678 GT:AD:DP:GQ:PL 0/1:187,160:347:99:4125,0,5432 chr1 166070907 . G C 442.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.129;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.71;ReadPosRankSum=0.365;SOR=0.293 GT:AD:DP:GQ:PL 0/1:11,14:25:99:471,0,358 chr1 166154897 . A G 3330.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.99;SOR=2.030 GT:AD:DP:GQ:PL 1/1:0,98:98:99:3359,294,0 chr1 166275800 . A G 206.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.191;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=5.161;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=0.770;SOR=0.110 GT:AD:DP:GQ:PL 0/1:12,7:19:99:235,0,410 chr1 166276216 . T C 865.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.236;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=2.727;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.24;ReadPosRankSum=0.803;SOR=1.255 GT:AD:DP:GQ:PL 0/1:16,29:45:99:894,0,441 chr1 166276464 . T A 522.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.355;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=1.303;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.76;ReadPosRankSum=1.287;SOR=1.115 GT:AD:DP:GQ:PL 0/1:18,20:38:99:551,0,467 chr1 166277182 . A G 297.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.529;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=8.923;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.27;ReadPosRankSum=-0.137;SOR=1.706 GT:AD:DP:GQ:PL 0/1:18,11:29:99:326,0,562 chr1 166295632 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 166300009 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 166300015 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 166480233 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 166505430 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 166566383 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 166621806 . T C 277.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.732;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=2.098;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.68;ReadPosRankSum=1.161;SOR=1.547 GT:AD:DP:GQ:PL 0/1:16,10:26:99:306,0,442 chr1 166639613 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 166730208 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 166747831 . T C 35.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.015;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.97;ReadPosRankSum=-0.812;SOR=0.593 GT:AD:DP:GQ:PL 0/1:6,3:9:64:64,0,155 chr1 166796557 . T C 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.948;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=1.735;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.20;ReadPosRankSum=0.719;SOR=1.440 GT:AD:DP:GQ:PL 0/1:21,8:29:99:179,0,540 chr1 166796911 . G C 67.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.344;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.52;ReadPosRankSum=0.953;SOR=1.022 GT:AD:DP:GQ:PL 0/1:10,5:15:96:96,0,304 chr1 166797005 . T C 110.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.434;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.23;ReadPosRankSum=-1.434;SOR=0.883 GT:AD:DP:GQ:PL 0/1:7,5:12:99:139,0,256 chr1 166797112 . T C 296.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:27:325,27,0 chr1 166857536 . C T 1297.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.83;SOR=3.737 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1326,105,0 chr1 166857987 . G A 544.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.63;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:573,42,0 chr1 166858437 . T C 673.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.40;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,18:18:54:702,54,0 chr1 166862167 . A C 1110.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.89;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1139,90,0 chr1 166862635 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 166863604 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 166863962 . C A 3106.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.07;SOR=1.225 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3135,300,0 chr1 166875885 . C G 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr1 166956569 . A C 272.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.80;ReadPosRankSum=0.406;SOR=1.802 GT:AD:DP:GQ:PL 0/1:3,8:11:88:301,0,88 chr1 167004121 . C T 261.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.174;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=1.519;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.70;ReadPosRankSum=0.297;SOR=1.179 GT:AD:DP:GQ:PL 0/1:23,11:34:99:290,0,622 chr1 167059567 . G T 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr1 167071551 . C A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 167090099 . C T 516.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.14;ReadPosRankSum=1.099;SOR=0.922 GT:AD:DP:GQ:PL 0/1:12,15:27:99:545,0,420 chr1 167090225 . G C 1924.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.011;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=4.309;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=1.681;SOR=0.419 GT:AD:DP:GQ:PL 0/1:57,75:132:99:1953,0,1388 chr1 167090338 . G T 1715.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.247;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=0.647;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.80;ReadPosRankSum=0.093;SOR=0.818 GT:AD:DP:GQ:PL 0/1:67,67:134:99:1744,0,1783 chr1 167090523 . A G 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=-0.480;SOR=0.045 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,224 chr1 167090593 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 167090596 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 167103912 . G C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=1.150;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 167113632 . G A 1030.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.21;SOR=2.165 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1059,96,0 chr1 167119236 . C A 2304.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.222;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.07;ReadPosRankSum=-1.551;SOR=0.702 GT:AD:DP:GQ:PL 0/1:58,77:135:99:2333,0,1665 chr1 167119648 . C T 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.85;ReadPosRankSum=-1.611;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,2:8:59:59,0,227 chr1 167124406 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 167124417 . A T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 167125926 . G C 11909.77 PASS AC=2;AF=1.00;AN=2;DP=361;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.99;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,361:361:99:11938,1083,0 chr1 167126528 . G A 2892.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.354;ClippingRankSum=0.000;DP=190;ExcessHet=3.0103;FS=2.554;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.23;ReadPosRankSum=0.787;SOR=0.530 GT:AD:DP:GQ:PL 0/1:82,108:190:99:2921,0,2054 chr1 167126644 . G A 2853.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.317;ClippingRankSum=0.000;DP=203;ExcessHet=3.0103;FS=3.155;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.06;ReadPosRankSum=-0.444;SOR=0.705 GT:AD:DP:GQ:PL 0/1:106,97:203:99:2882,0,2953 chr1 167128330 . G A 4319.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.033;ClippingRankSum=0.000;DP=303;ExcessHet=3.0103;FS=6.008;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.26;ReadPosRankSum=0.139;SOR=0.997 GT:AD:DP:GQ:PL 0/1:148,155:303:99:4348,0,4146 chr1 167128502 . C A 7119.77 PASS AC=2;AF=1.00;AN=2;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.27;SOR=0.987 GT:AD:DP:GQ:PL 1/1:0,214:214:99:7148,640,0 chr1 167128858 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 167132796 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 167156843 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 167180119 . G C 221.84 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.55;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:18:250,18,0 chr1 167180138 . G A 221.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.13;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:250,18,0 chr1 167180256 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 167303275 . A C 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=0.623;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,115 chr1 167338440 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 167370395 . A C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 167374758 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 167375981 . A C 401.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.386;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=5.405;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.766;SOR=2.093 GT:AD:DP:GQ:PL 0/1:23,13:36:99:430,0,726 chr1 167386961 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 167397956 . C T 563.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.345;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=0.452;SOR=0.784 GT:AD:DP:GQ:PL 0/1:24,19:43:99:592,0,801 chr1 167401751 . C A 706.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.94;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,19:19:57:735,57,0 chr1 167412014 . A G 2952.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.527;ClippingRankSum=0.000;DP=211;ExcessHet=3.0103;FS=6.245;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=-0.754;SOR=0.391 GT:AD:DP:GQ:PL 0/1:108,103:211:99:2981,0,3086 chr1 167413137 . A C 3641.77 PASS AC=2;AF=1.00;AN=2;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.13;SOR=1.362 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3670,349,0 chr1 167415220 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 167431874 . A T 148.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.348;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.30;ReadPosRankSum=2.609;SOR=0.223 GT:AD:DP:GQ:PL 0/1:11,5:16:99:177,0,742 chr1 167431884 . C G 157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.14;ReadPosRankSum=1.760;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,5:13:99:186,0,520 chr1 167431887 . C T 157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.869;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.14;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,5:13:99:186,0,520 chr1 167431896 . C T 157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.15;ReadPosRankSum=1.027;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:186,0,520 chr1 167432588 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 167433975 . G A 1145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.377;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=2.087;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.97;ReadPosRankSum=-0.066;SOR=0.412 GT:AD:DP:GQ:PL 0/1:39,43:82:99:1174,0,1139 chr1 167434267 . A G 299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.270;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.78;ReadPosRankSum=-0.353;SOR=0.223 GT:AD:DP:GQ:PL 0/1:9,10:19:99:328,0,224 chr1 167434388 . A G 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 167434841 . G A 2290.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.518;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=2.714;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.64;ReadPosRankSum=-0.362;SOR=0.924 GT:AD:DP:GQ:PL 0/1:79,89:168:99:2319,0,2063 chr1 167434942 . G A 1333.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.241;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=3.684;MLEAC=1;MLEAF=0.500;MQ=59.67;MQRankSum=-1.473;QD=12.02;ReadPosRankSum=0.802;SOR=1.075 GT:AD:DP:GQ:PL 0/1:58,53:111:99:1362,0,1488 chr1 167438449 . T C 549.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.705;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.17;ReadPosRankSum=-0.052;SOR=0.407 GT:AD:DP:GQ:PL 0/1:16,18:34:99:578,0,532 chr1 167438836 . C A 833.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.578;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=3.100;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.02;ReadPosRankSum=0.150;SOR=0.097 GT:AD:DP:GQ:PL 0/1:24,25:49:99:862,0,842 chr1 167439328 . G T 1161.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.586;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=0.686;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.22;ReadPosRankSum=0.705;SOR=0.600 GT:AD:DP:GQ:PL 0/1:80,46:126:99:1190,0,2281 chr1 167439637 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 167446610 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 167454853 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 167460421 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 167462277 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 167481023 . T A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 167518349 . C G 1405.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.952;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.871;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.34;ReadPosRankSum=2.300;SOR=0.560 GT:AD:DP:GQ:PL 0/1:46,52:98:99:1434,0,1372 chr1 167526822 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 167532067 . A T 41.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:69,6,0 chr1 167535829 . C T 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr1 167535835 . A G 87.28 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.34;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:9:115,9,0 chr1 167546035 . T C 3072.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.689;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=33.04;ReadPosRankSum=1.154;SOR=1.609 GT:AD:DP:GQ:PL 1/1:2,91:93:99:3101,230,0 chr1 167553216 . C T 753.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.41;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,24:24:72:782,72,0 chr1 167614026 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 167621941 . C A 152.03 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.40;QD=29.59;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 167632647 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 167660122 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 167660248 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 167672055 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 167672142 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 167704458 . A C 360.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.123;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=3.358;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=-0.360;SOR=0.148 GT:AD:DP:GQ:PL 0/1:14,12:26:99:389,0,463 chr1 167721830 . C A 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 167722454 . T C 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr1 167772021 . C G 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.000;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 167772072 . A G 277.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.605;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.15;ReadPosRankSum=-0.319;SOR=0.818 GT:AD:DP:GQ:PL 0/1:3,9:12:89:306,0,89 chr1 167775920 . A G 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.589;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-0.475;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,170 chr1 167777985 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 167809606 . G A 373.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.76;ReadPosRankSum=0.378;SOR=1.179 GT:AD:DP:GQ:PL 0/1:7,11:18:99:402,0,238 chr1 167820237 . G C 134.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.98;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:163,15,0 chr1 167822841 . G T 237.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:266,24,0 chr1 167824239 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 167824432 . C T 1147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.322;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.63;ReadPosRankSum=-0.634;SOR=0.687 GT:AD:DP:GQ:PL 0/1:60,48:108:99:1176,0,1693 chr1 167824892 . G A 1341.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.181;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=7.726;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.91;ReadPosRankSum=1.004;SOR=1.781 GT:AD:DP:GQ:PL 0/1:46,44:90:99:1370,0,1433 chr1 167832830 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 167836201 . G A 845.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.050;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=1.907;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.72;ReadPosRankSum=-0.608;SOR=0.486 GT:AD:DP:GQ:PL 0/1:53,34:87:99:874,0,1504 chr1 167837404 . C G 489.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.578;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=2.809;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.00;ReadPosRankSum=0.499;SOR=0.315 GT:AD:DP:GQ:PL 0/1:29,20:49:99:518,0,858 chr1 167837409 . T A 1749.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.45;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1778,138,0 chr1 167837458 . T C 1009.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.60;SOR=1.751 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1038,99,0 chr1 167837476 . G A 213.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.600;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.72;ReadPosRankSum=1.574;SOR=0.368 GT:AD:DP:GQ:PL 0/1:13,9:22:99:242,0,406 chr1 167841135 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 167845792 . A G 1914.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.176;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=1.358;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.08;ReadPosRankSum=-1.740;SOR=0.874 GT:AD:DP:GQ:PL 0/1:66,70:136:99:1943,0,1965 chr1 167845929 . T C 2102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.362;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.67;ReadPosRankSum=1.792;SOR=0.658 GT:AD:DP:GQ:PL 0/1:90,76:166:99:2131,0,2548 chr1 167846372 . C A 1128.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.594;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=2.077;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.21;ReadPosRankSum=-0.159;SOR=0.283 GT:AD:DP:GQ:PL 0/1:28,34:62:99:1157,0,945 chr1 167848401 . A G 3700.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.84;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3729,360,0 chr1 167854217 . A G 352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.909;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.03;ReadPosRankSum=-0.818;SOR=0.693 GT:AD:DP:GQ:PL 0/1:11,11:22:99:381,0,393 chr1 167854267 . G A 487.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.154;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=1.503;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.61;ReadPosRankSum=0.853;SOR=0.330 GT:AD:DP:GQ:PL 0/1:23,19:42:99:516,0,733 chr1 167854274 . T C 1719.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.60;SOR=2.409 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1748,132,0 chr1 167856247 . T C 5686.77 PASS AC=2;AF=1.00;AN=2;DP=178;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.95;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,178:178:99:5715,533,0 chr1 167856368 . A G 3931.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.60;SOR=1.530 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3960,351,0 chr1 167860768 . G C 2218.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.70;SOR=1.819 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2247,210,0 chr1 167870340 . G A 509.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.212;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=1.363;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.45;ReadPosRankSum=0.753;SOR=0.990 GT:AD:DP:GQ:PL 0/1:15,18:33:99:538,0,425 chr1 167875315 . C A 448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.681;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.95;ReadPosRankSum=-1.005;SOR=0.490 GT:AD:DP:GQ:PL 0/1:25,16:41:99:477,0,850 chr1 167875344 . C G 266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.420;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.34;ReadPosRankSum=-0.437;SOR=0.619 GT:AD:DP:GQ:PL 0/1:21,11:32:99:295,0,679 chr1 167878346 . T C 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 167880080 . A G 736.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.379;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.51;ReadPosRankSum=-0.530;SOR=0.813 GT:AD:DP:GQ:PL 0/1:36,28:64:99:765,0,1054 chr1 167880176 . A G 1261.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.373;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=0.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.51;ReadPosRankSum=0.426;SOR=0.784 GT:AD:DP:GQ:PL 0/1:70,50:120:99:1290,0,1655 chr1 167883329 . C T 292.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.339;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=3.388;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.20;ReadPosRankSum=0.226;SOR=0.144 GT:AD:DP:GQ:PL 0/1:13,11:24:99:321,0,458 chr1 168002741 . G T 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.627;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.20;ReadPosRankSum=0.437;SOR=1.302 GT:AD:DP:GQ:PL 0/1:11,8:19:99:298,0,497 chr1 168002742 . C G 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.627;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.20;ReadPosRankSum=0.306;SOR=1.302 GT:AD:DP:GQ:PL 0/1:11,8:19:99:298,0,497 chr1 168002785 . G A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=-0.084;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,115 chr1 168019291 . A G 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.56;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr1 168044612 . T C 664.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.729;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.57;ReadPosRankSum=-0.621;SOR=0.770 GT:AD:DP:GQ:PL 0/1:24,25:49:99:693,0,617 chr1 168056162 . G C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.40;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 168056171 . A G 137.18 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=6.990;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.44;ReadPosRankSum=1.282;SOR=3.229 GT:AD:DP:GQ:PL 0/1:1,4:5:10:165,0,10 chr1 168056300 . T C 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.450;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=0.566;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,4:8:75:143,0,75 chr1 168065866 . G C 942.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.18;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,25:25:75:971,75,0 chr1 168099810 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 168137478 . T C 2017.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.63;SOR=1.942 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2046,180,0 chr1 168145450 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 168171400 . T C 37.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:65,6,0 chr1 168208556 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.25;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 168231495 . T C 503.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.688;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=4.993;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=0.282;SOR=1.609 GT:AD:DP:GQ:PL 0/1:16,19:35:99:532,0,440 chr1 168239070 . T C 1035.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.765;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.19;ReadPosRankSum=-0.552;SOR=0.687 GT:AD:DP:GQ:PL 0/1:34,39:73:99:1064,0,889 chr1 168249266 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 168293051 . A G 466.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.106;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=0.000;SOR=0.910 GT:AD:DP:GQ:PL 0/1:17,13:30:99:495,0,1173 chr1 168293061 . C T 542.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.220;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.51;ReadPosRankSum=-1.281;SOR=0.787 GT:AD:DP:GQ:PL 0/1:19,16:35:99:571,0,1207 chr1 168293386 . A G 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.13;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 168300692 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 168304963 . G A 2043.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.093;ClippingRankSum=0.000;DP=188;ExcessHet=3.0103;FS=0.546;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.87;ReadPosRankSum=-1.845;SOR=0.770 GT:AD:DP:GQ:PL 0/1:105,83:188:99:2072,0,2799 chr1 168309026 . G A 792.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.029;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=11.474;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=-0.787;SOR=0.073 GT:AD:DP:GQ:PL 0/1:31,28:59:99:821,0,1049 chr1 168313253 . T C 503.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.102;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.79;ReadPosRankSum=1.228;SOR=0.846 GT:AD:DP:GQ:PL 0/1:14,16:30:99:532,0,414 chr1 168330240 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 168457666 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 168480349 . C G 104.28 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.84;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:9:132,9,0 chr1 168480359 . G T 104.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:132,9,0 chr1 168485551 . A G 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=1.036;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr1 168485610 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.85;ReadPosRankSum=-2.450;SOR=0.223 GT:AD:DP:GQ:PL 0/1:4,4:8:75:75,0,109 chr1 168485685 . C T 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.97;ReadPosRankSum=0.366;SOR=1.802 GT:AD:DP:GQ:PL 0/1:5,2:7:63:63,0,120 chr1 168540884 . T A 1804.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.73;QD=30.54;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1833,149,0 chr1 168541266 . C T 586.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.508;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.44;MQRankSum=-6.540;QD=10.87;ReadPosRankSum=1.460;SOR=0.715 GT:AD:DP:GQ:PL 0/1:34,20:54:99:615,0,1113 chr1 168541843 . G A 1151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.496;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.76;MQRankSum=-2.670;QD=18.00;ReadPosRankSum=0.824;SOR=0.263 GT:AD:DP:GQ:PL 0/1:30,34:64:99:1180,0,1040 chr1 168541917 . T C 5196.77 PASS AC=2;AF=1.00;AN=2;DP=168;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.19;QD=30.93;SOR=1.320 GT:AD:DP:GQ:PL 1/1:0,168:168:99:5225,504,0 chr1 168542046 . T C 1101.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.789;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=18.277;MLEAC=1;MLEAF=0.500;MQ=58.51;MQRankSum=-6.334;QD=7.20;ReadPosRankSum=-2.231;SOR=2.066 GT:AD:DP:GQ:PL 0/1:110,43:153:99:1130,0,3042 chr1 168542083 . C T 301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.702;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=2.654;MLEAC=1;MLEAF=0.500;MQ=57.74;MQRankSum=-9.576;QD=3.02;ReadPosRankSum=-3.486;SOR=1.218 GT:AD:DP:GQ:PL 0/1:85,15:100:99:330,0,4386 chr1 168542087 . G C 213.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.087;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=1.440;MLEAC=1;MLEAF=0.500;MQ=57.78;MQRankSum=-9.118;QD=2.32;ReadPosRankSum=-1.512;SOR=1.105 GT:AD:DP:GQ:PL 0/1:82,10:92:99:242,0,4362 chr1 168543891 . C T 3240.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.004;ClippingRankSum=0.000;DP=245;ExcessHet=3.0103;FS=6.983;MLEAC=1;MLEAF=0.500;MQ=59.89;MQRankSum=-0.842;QD=13.28;ReadPosRankSum=-0.793;SOR=0.758 GT:AD:DP:GQ:PL 0/1:123,121:244:99:3269,0,3391 chr1 168544005 . G A 2266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.268;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=3.447;MLEAC=1;MLEAF=0.500;MQ=59.85;MQRankSum=0.000;QD=15.85;ReadPosRankSum=1.309;SOR=0.449 GT:AD:DP:GQ:PL 0/1:59,84:143:99:2295,0,1660 chr1 168544108 . A T 285.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.244;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.91;ReadPosRankSum=0.595;SOR=0.430 GT:AD:DP:GQ:PL 0/1:14,10:24:99:314,0,498 chr1 168576520 . C T 394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.734;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.32;MQRankSum=-6.956;QD=6.58;ReadPosRankSum=-0.510;SOR=0.591 GT:AD:DP:GQ:PL 0/1:44,16:60:99:423,0,1394 chr1 168576612 . T C 2164.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.525;ClippingRankSum=0.000;DP=198;ExcessHet=3.0103;FS=4.405;MLEAC=1;MLEAF=0.500;MQ=56.52;MQRankSum=-10.873;QD=10.93;ReadPosRankSum=2.309;SOR=1.015 GT:AD:DP:GQ:PL 0/1:119,79:198:99:2193,0,3011 chr1 168576711 . G A 2810.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.811;ClippingRankSum=0.000;DP=273;ExcessHet=3.0103;FS=0.929;MLEAC=1;MLEAF=0.500;MQ=58.08;MQRankSum=-7.505;QD=10.30;ReadPosRankSum=-1.822;SOR=0.626 GT:AD:DP:GQ:PL 0/1:153,120:273:99:2839,0,4147 chr1 168580184 . C T 2285.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.603;ClippingRankSum=0.000;DP=264;ExcessHet=3.0103;FS=6.896;MLEAC=1;MLEAF=0.500;MQ=58.76;MQRankSum=3.721;QD=8.66;ReadPosRankSum=1.231;SOR=1.080 GT:AD:DP:GQ:PL 0/1:164,100:264:99:2314,0,4556 chr1 168696736 . T C 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.532;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.91;ReadPosRankSum=1.044;SOR=1.329 GT:AD:DP:GQ:PL 0/1:10,4:14:99:125,0,307 chr1 168879118 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 168879126 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 169024762 . C T 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 169106974 . G C 501.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.515;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.84;ReadPosRankSum=-0.169;SOR=0.773 GT:AD:DP:GQ:PL 0/1:41,23:64:99:530,0,1046 chr1 169111197 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 169111599 . C T 371.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.062;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=2.124;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.28;ReadPosRankSum=-0.738;SOR=1.371 GT:AD:DP:GQ:PL 0/1:16,12:28:99:400,0,450 chr1 169124862 . T A 870.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.889;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.916;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.62;ReadPosRankSum=0.509;SOR=0.563 GT:AD:DP:GQ:PL 0/1:36,33:69:99:899,0,1053 chr1 169125221 . C T 266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.52;ReadPosRankSum=0.908;SOR=1.179 GT:AD:DP:GQ:PL 0/1:5,8:13:99:295,0,170 chr1 169129823 . G A 129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.037;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.884;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.63;ReadPosRankSum=-0.446;SOR=0.160 GT:AD:DP:GQ:PL 0/1:12,5:17:99:158,0,412 chr1 169131669 . A C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.000;SOR=2.209 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,78 chr1 169131772 . G T 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 169131838 . A G 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.50;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr1 169131867 . T C 220.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=31.54;ReadPosRankSum=1.465;SOR=1.108 GT:AD:DP:GQ:PL 0/1:1,6:7:24:249,0,24 chr1 169131875 . G C 214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.619;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.85;ReadPosRankSum=2.100;SOR=1.061 GT:AD:DP:GQ:PL 0/1:2,6:8:99:243,0,108 chr1 169131900 . C T 214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=7.782;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.86;ReadPosRankSum=0.000;SOR=1.044 GT:AD:DP:GQ:PL 0/1:3,6:9:99:243,0,108 chr1 169131907 . A G 208.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=11.181;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.88;ReadPosRankSum=0.204;SOR=1.036 GT:AD:DP:GQ:PL 0/1:4,6:10:99:237,0,189 chr1 169131908 . T C 208.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.097;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=12.175;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=0.525;SOR=1.032 GT:AD:DP:GQ:PL 0/1:5,6:11:99:237,0,189 chr1 169131939 . T C 112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=26.946;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.40;ReadPosRankSum=-0.660;SOR=3.219 GT:AD:DP:GQ:PL 0/1:8,4:12:99:141,0,363 chr1 169131940 . G A 112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=26.946;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.40;ReadPosRankSum=-0.660;SOR=3.219 GT:AD:DP:GQ:PL 0/1:8,4:12:99:141,0,363 chr1 169131959 . T C 97.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=34.857;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.43;ReadPosRankSum=-0.866;SOR=3.219 GT:AD:DP:GQ:PL 0/1:14,4:18:99:126,0,556 chr1 169132600 . A G 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.128;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=23.843;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.99;ReadPosRankSum=2.404;SOR=1.387 GT:AD:DP:GQ:PL 0/1:15,4:19:99:123,0,557 chr1 169132631 . A G 64.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.486;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=14.699;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.23;ReadPosRankSum=1.551;SOR=1.399 GT:AD:DP:GQ:PL 0/1:25,4:29:93:93,0,889 chr1 169132985 . G C 326.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.742;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=6.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=1.792;SOR=3.215 GT:AD:DP:GQ:PL 0/1:11,10:21:99:355,0,294 chr1 169168789 . A G 119.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.238;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=1.897;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.44;ReadPosRankSum=-0.564;SOR=1.329 GT:AD:DP:GQ:PL 0/1:16,6:22:99:148,0,428 chr1 169169069 . C A 158.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.244;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.47;ReadPosRankSum=-1.431;SOR=0.648 GT:AD:DP:GQ:PL 0/1:18,11:29:99:187,0,427 chr1 169169080 . T A 164.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.999;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=1.583;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.10;ReadPosRankSum=0.141;SOR=0.746 GT:AD:DP:GQ:PL 0/1:18,9:27:99:193,0,415 chr1 169169630 . C T 500.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.394;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.52;ReadPosRankSum=1.261;SOR=0.746 GT:AD:DP:GQ:PL 0/1:22,18:40:99:529,0,693 chr1 169190628 . G T 851.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.203;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=2.118;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.53;ReadPosRankSum=-0.686;SOR=0.449 GT:AD:DP:GQ:PL 0/1:33,35:68:99:880,0,823 chr1 169191294 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 169230873 . C T 526.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.779;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=4.501;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.49;ReadPosRankSum=0.539;SOR=0.167 GT:AD:DP:GQ:PL 0/1:15,19:34:99:555,0,490 chr1 169247174 . C G 935.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.73;SOR=3.528 GT:AD:DP:GQ:PL 1/1:0,25:25:75:964,75,0 chr1 169287263 . C T 408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.292;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.19;ReadPosRankSum=0.000;SOR=0.622 GT:AD:DP:GQ:PL 0/1:13,18:31:99:437,0,336 chr1 169298839 . T C 266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.52;ReadPosRankSum=-0.026;SOR=1.179 GT:AD:DP:GQ:PL 0/1:5,8:13:99:295,0,170 chr1 169303061 . A T 410.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.527;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=5.632;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.25;ReadPosRankSum=-0.984;SOR=0.160 GT:AD:DP:GQ:PL 0/1:15,16:31:99:439,0,431 chr1 169303213 . A T 725.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.69;SOR=2.712 GT:AD:DP:GQ:PL 1/1:0,17:17:51:754,51,0 chr1 169303215 . G A 725.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.06;SOR=2.712 GT:AD:DP:GQ:PL 1/1:0,17:17:51:754,51,0 chr1 169324483 . G A 509.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.266;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.44;ReadPosRankSum=-0.870;SOR=0.929 GT:AD:DP:GQ:PL 0/1:11,20:31:99:538,0,264 chr1 169368138 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 169376466 . G A 1762.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.56;SOR=2.540 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1791,153,0 chr1 169382358 . A G 1013.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.70;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1042,93,0 chr1 169400879 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 169400912 . T A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 169400989 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 169401006 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 169421719 . A T 2378.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.08;SOR=1.850 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2407,183,0 chr1 169421916 . A G 1491.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.44;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1520,147,0 chr1 169424988 . A G 1378.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.64;SOR=0.929 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1407,135,0 chr1 169465789 . C T 647.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.40;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:676,51,0 chr1 169487790 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 169524715 . A C 1560.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.85;SOR=2.078 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1589,147,0 chr1 169529596 . T C 998.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=4.332 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1027,81,0 chr1 169540995 . G A 10604.77 PASS AC=2;AF=1.00;AN=2;DP=324;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.80;QD=32.93;SOR=0.881 GT:AD:DP:GQ:PL 1/1:0,322:322:99:10633,962,0 chr1 169550179 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 169556528 . T C 2064.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.73;SOR=3.651 GT:AD:DP:GQ:PL 1/1:0,55:55:99:2093,165,0 chr1 169556570 . G A 2800.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.16;SOR=2.542 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2829,246,0 chr1 169576584 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 169576597 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 169582444 . T C 376.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.12;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:45:405,45,0 chr1 169594929 . G C 582.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.28;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:50:611,50,0 chr1 169596327 . T G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 169597075 . C T 2987.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.80;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3016,291,0 chr1 169603317 . G C 818.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.88;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,19:19:57:847,57,0 chr1 169603319 . G C 818.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.82;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,18:18:57:847,57,0 chr1 169603407 . C T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 169607330 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 169609348 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.85;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 169610028 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr1 169611647 . C T 2017.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.547;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.01;ReadPosRankSum=-0.518;SOR=0.666 GT:AD:DP:GQ:PL 0/1:86,82:168:99:2046,0,2371 chr1 169630016 . T C 818.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.995;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=1.087;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.62;ReadPosRankSum=-1.376;SOR=0.968 GT:AD:DP:GQ:PL 0/1:23,33:56:99:847,0,596 chr1 169639679 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 169663031 . A T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 169691524 . A G 860.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.692;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=4.058;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=-1.348;SOR=1.435 GT:AD:DP:GQ:PL 0/1:33,29:62:99:889,0,822 chr1 169701799 . T A 241.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.602;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.27;ReadPosRankSum=-0.046;SOR=0.175 GT:AD:DP:GQ:PL 0/1:7,7:14:99:270,0,482 chr1 169701800 . T A 241.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.198;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.27;ReadPosRankSum=-0.046;SOR=0.175 GT:AD:DP:GQ:PL 0/1:7,7:14:99:270,0,482 chr1 169703202 . C T 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.84;ReadPosRankSum=0.647;SOR=0.976 GT:AD:DP:GQ:PL 0/1:6,8:14:99:292,0,193 chr1 169704697 . G A 1022.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.640;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=2.432;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.73;ReadPosRankSum=-1.506;SOR=1.210 GT:AD:DP:GQ:PL 0/1:29,36:65:99:1051,0,777 chr1 169707082 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 169707152 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 169708366 . C G 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.549;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.31;ReadPosRankSum=0.143;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:224,0,169 chr1 169708568 . A G 3917.77 PASS AC=2;AF=1.00;AN=2;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.85;SOR=1.089 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3946,369,0 chr1 169708883 . T C 2268.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.41;SOR=2.694 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2297,192,0 chr1 169725777 . A G 1301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.867;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=2.479;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.42;ReadPosRankSum=0.079;SOR=0.962 GT:AD:DP:GQ:PL 0/1:63,51:114:99:1330,0,1642 chr1 169725969 . T A 479.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.469;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=6.435;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.54;ReadPosRankSum=1.019;SOR=0.048 GT:AD:DP:GQ:PL 0/1:16,17:33:99:508,0,522 chr1 169726843 . G A 1604.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.271;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=0.664;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.71;ReadPosRankSum=1.462;SOR=0.593 GT:AD:DP:GQ:PL 0/1:75,62:137:99:1633,0,2187 chr1 169726892 . A G 1729.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.784;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=0.794;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.47;ReadPosRankSum=0.891;SOR=0.546 GT:AD:DP:GQ:PL 0/1:42,63:105:99:1758,0,1133 chr1 169727613 . A T 1282.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.455;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=2.110;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.24;ReadPosRankSum=-0.751;SOR=1.022 GT:AD:DP:GQ:PL 0/1:37,42:79:99:1311,0,1045 chr1 169727805 . G A 1865.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.038;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=4.053;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.87;ReadPosRankSum=-0.345;SOR=1.036 GT:AD:DP:GQ:PL 0/1:75,70:145:99:1894,0,1847 chr1 169727935 . A G 2545.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.470;ClippingRankSum=0.000;DP=219;ExcessHet=3.0103;FS=9.906;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.62;ReadPosRankSum=-0.852;SOR=0.496 GT:AD:DP:GQ:PL 0/1:121,98:219:99:2574,0,3075 chr1 169728025 . T C 2012.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.057;ClippingRankSum=0.000;DP=148;ExcessHet=3.0103;FS=2.910;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.60;ReadPosRankSum=1.878;SOR=0.947 GT:AD:DP:GQ:PL 0/1:77,71:148:99:2041,0,2259 chr1 169728303 . C T 1059.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.632;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=2.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.04;ReadPosRankSum=0.646;SOR=0.434 GT:AD:DP:GQ:PL 0/1:49,39:88:99:1088,0,1371 chr1 169728450 . T C 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr1 169729648 . A G 1779.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.899;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.38;ReadPosRankSum=1.817;SOR=0.692 GT:AD:DP:GQ:PL 0/1:70,63:133:99:1808,0,1967 chr1 169729684 . T G 4586.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.964;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=3.323;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.85;ReadPosRankSum=-0.655;SOR=0.473 GT:AD:DP:GQ:PL 1/1:1,143:144:99:4615,421,0 chr1 169731615 . A T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.385;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.96;ReadPosRankSum=-0.126;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:64:76,0,64 chr1 169731820 . A G 1638.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.472;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=8.590;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.90;ReadPosRankSum=-0.633;SOR=1.421 GT:AD:DP:GQ:PL 0/1:67,60:127:99:1667,0,1857 chr1 169731919 . T G 1988.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.908;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.51;ReadPosRankSum=0.928;SOR=0.681 GT:AD:DP:GQ:PL 0/1:75,84:159:99:2017,0,1812 chr1 169731967 . A G 1677.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.995;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=0.731;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.87;ReadPosRankSum=0.470;SOR=0.796 GT:AD:DP:GQ:PL 0/1:60,61:121:99:1706,0,1478 chr1 169732658 . A G 397.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.783;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.72;ReadPosRankSum=0.050;SOR=0.631 GT:AD:DP:GQ:PL 0/1:11,18:29:99:426,0,253 chr1 169732760 . T C 842.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.334;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.86;ReadPosRankSum=-0.497;SOR=0.629 GT:AD:DP:GQ:PL 0/1:27,23:50:99:871,0,1708 chr1 169732763 . T C 842.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.739;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.52;ReadPosRankSum=0.539;SOR=0.722 GT:AD:DP:GQ:PL 0/1:28,23:51:99:871,0,1708 chr1 169733137 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 169733276 . T C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.674;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 169733352 . T G 361.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.449;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.73;ReadPosRankSum=0.154;SOR=0.610 GT:AD:DP:GQ:PL 0/1:12,11:23:99:390,0,397 chr1 169733446 . C T 1067.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.345;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.881;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.71;ReadPosRankSum=-0.909;SOR=0.569 GT:AD:DP:GQ:PL 0/1:44,40:84:99:1096,0,1211 chr1 169733476 . G T 1144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=2.656;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.80;ReadPosRankSum=0.557;SOR=0.474 GT:AD:DP:GQ:PL 0/1:51,46:97:99:1173,0,1372 chr1 169733564 . G A 2789.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.82;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2818,255,0 chr1 169733631 . C A 594.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.183;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=4.044;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.22;ReadPosRankSum=-0.363;SOR=0.315 GT:AD:DP:GQ:PL 0/1:31,22:53:99:623,0,931 chr1 169733758 . G A 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=0.000;SOR=0.473 GT:AD:DP:GQ:PL 0/1:8,6:14:99:208,0,292 chr1 169733833 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 169792476 . C A 35.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.94;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:64:64,0,71 chr1 169795279 . C T 709.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.853;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=2.350;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.65;ReadPosRankSum=0.019;SOR=1.067 GT:AD:DP:GQ:PL 0/1:27,25:52:99:738,0,702 chr1 169795427 . C G 1092.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.22;SOR=1.885 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1121,105,0 chr1 169798892 . T C 566.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.997;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.735;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.71;ReadPosRankSum=0.242;SOR=0.330 GT:AD:DP:GQ:PL 0/1:13,19:32:99:595,0,412 chr1 169798939 . C A 598.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.940;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=2.377;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.638;SOR=0.375 GT:AD:DP:GQ:PL 0/1:29,27:56:99:627,0,756 chr1 169799231 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 169803144 . G T 1265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.768;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.34;ReadPosRankSum=-0.442;SOR=0.746 GT:AD:DP:GQ:PL 0/1:27,46:73:99:1294,0,706 chr1 169804019 . T C 592.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.716;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.89;ReadPosRankSum=0.812;SOR=0.789 GT:AD:DP:GQ:PL 0/1:27,19:46:99:621,0,909 chr1 169804176 . G A 2055.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.828;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=1.092;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.03;ReadPosRankSum=0.669;SOR=0.616 GT:AD:DP:GQ:PL 0/1:123,82:205:99:2084,0,3167 chr1 169808028 . T C 349.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.422;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=1.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=-0.721;SOR=0.368 GT:AD:DP:GQ:PL 0/1:14,13:27:99:378,0,401 chr1 169821527 . G A 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr1 169823501 . A T 688.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.469;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=3.724;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.08;ReadPosRankSum=-1.579;SOR=1.262 GT:AD:DP:GQ:PL 0/1:28,29:57:99:717,0,648 chr1 169823551 . T C 457.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.816;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=2.819;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.65;ReadPosRankSum=0.607;SOR=1.274 GT:AD:DP:GQ:PL 0/1:25,18:43:99:486,0,608 chr1 169825989 . A G 122.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.691;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=5.756;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.44;ReadPosRankSum=0.207;SOR=0.515 GT:AD:DP:GQ:PL 0/1:6,7:13:99:151,0,178 chr1 169829591 . G C 115.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.54;ReadPosRankSum=-0.328;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:144,0,104 chr1 169830739 . G T 892.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.424;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.71;ReadPosRankSum=-0.979;SOR=0.659 GT:AD:DP:GQ:PL 0/1:90,43:133:99:921,0,2284 chr1 169830921 . C T 293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.28;ReadPosRankSum=-0.866;SOR=0.804 GT:AD:DP:GQ:PL 0/1:8,9:17:99:322,0,283 chr1 169830949 . C T 112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.11;ReadPosRankSum=-1.068;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:92:141,0,92 chr1 169850464 . A G 671.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.202;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=1.469;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.16;ReadPosRankSum=-0.141;SOR=1.218 GT:AD:DP:GQ:PL 0/1:14,23:37:99:700,0,337 chr1 169850529 . G A 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.788;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.88;ReadPosRankSum=-1.087;SOR=0.307 GT:AD:DP:GQ:PL 0/1:11,7:18:99:170,0,337 chr1 169854577 . T C 2536.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.327;ClippingRankSum=0.000;DP=194;ExcessHet=3.0103;FS=0.527;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.08;ReadPosRankSum=0.441;SOR=0.618 GT:AD:DP:GQ:PL 0/1:99,95:194:99:2565,0,2523 chr1 169854649 . C G 2292.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.117;ClippingRankSum=0.000;DP=173;ExcessHet=3.0103;FS=3.513;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=0.493;SOR=0.844 GT:AD:DP:GQ:PL 0/1:87,84:171:99:2321,0,2307 chr1 169854927 . A G 945.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.415;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.20;ReadPosRankSum=-0.796;SOR=0.784 GT:AD:DP:GQ:PL 0/1:22,33:55:99:974,0,571 chr1 169854963 . G A 573.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.903;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=2.614;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.13;ReadPosRankSum=0.177;SOR=1.949 GT:AD:DP:GQ:PL 0/1:12,18:30:99:602,0,343 chr1 169855062 . A G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.000;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 169858957 . A G 382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=-1.005;SOR=0.384 GT:AD:DP:GQ:PL 0/1:18,12:30:99:411,0,661 chr1 169859186 . G A 1856.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.800;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=2.166;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.72;ReadPosRankSum=0.025;SOR=0.501 GT:AD:DP:GQ:PL 0/1:70,76:146:99:1885,0,1872 chr1 169862852 . A G 2128.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.77;SOR=4.332 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2157,168,0 chr1 169864681 . T C 1046.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.16;SOR=5.211 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1075,81,0 chr1 169866809 . A C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 169867034 . T C 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.358;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=2.103;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.31;ReadPosRankSum=1.218;SOR=1.302 GT:AD:DP:GQ:PL 0/1:18,4:22:99:101,0,467 chr1 169873876 . C T 397.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.682;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=6.576;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.91;ReadPosRankSum=-0.481;SOR=3.150 GT:AD:DP:GQ:PL 0/1:13,12:25:99:426,0,366 chr1 169876193 . A G 501.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.956;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=2.764;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.30;ReadPosRankSum=0.352;SOR=0.132 GT:AD:DP:GQ:PL 0/1:9,17:26:99:530,0,298 chr1 169878542 . G A 460.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.82;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:489,36,0 chr1 169882018 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 169889051 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 169893652 . G A 160.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.81;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:189,18,0 chr1 169916656 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 169921433 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 169921792 . A G 2878.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.35;SOR=1.481 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2907,267,0 chr1 169960908 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 169960910 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 169972620 . A T 429.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.65;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:45:458,45,0 chr1 169982607 . A G 513.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.66;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:542,39,0 chr1 169983244 . G T 331.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.41;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:360,27,0 chr1 169993301 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 169993361 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 170035581 . G A 1040.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.678;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=7.443;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.97;ReadPosRankSum=1.194;SOR=1.171 GT:AD:DP:GQ:PL 0/1:72,44:116:99:1069,0,1891 chr1 170074710 . C T 82.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.69;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:111,0,30 chr1 170116312 . C A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 170151690 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:70:72,0,70 chr1 170166369 . T C 152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.359;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.22;MQRankSum=-0.494;QD=8.04;ReadPosRankSum=0.951;SOR=0.223 GT:AD:DP:GQ:PL 0/1:13,6:19:99:181,0,482 chr1 170166467 . C T 1155.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.085;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=0.885;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.70;ReadPosRankSum=-1.429;SOR=0.826 GT:AD:DP:GQ:PL 0/1:47,44:91:99:1184,0,1302 chr1 170166528 . C T 2124.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.344;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.28;ReadPosRankSum=0.331;SOR=0.733 GT:AD:DP:GQ:PL 0/1:79,81:160:99:2153,0,2228 chr1 170166619 . T C 3585.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=214;ExcessHet=3.0103;FS=3.863;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.83;ReadPosRankSum=-0.022;SOR=0.686 GT:AD:DP:GQ:PL 0/1:116,97:213:99:3614,0,6305 chr1 170166624 . T C 3542.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.058;ClippingRankSum=0.000;DP=208;ExcessHet=3.0103;FS=3.949;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.11;ReadPosRankSum=0.105;SOR=0.768 GT:AD:DP:GQ:PL 0/1:114,93:207:99:3571,0,6293 chr1 170226746 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 170252873 . T C 43.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:71,6,0 chr1 170369796 . C G 162.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.616;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.80;ReadPosRankSum=-0.533;SOR=0.330 GT:AD:DP:GQ:PL 0/1:4,7:11:99:191,0,134 chr1 170388853 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 170457541 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 170458395 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 170469927 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 170475909 . T G 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 170475929 . C T 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 170532026 . T C 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.253;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr1 170532244 . A C 5601.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.953;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=3.802;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.12;ReadPosRankSum=1.015;SOR=0.810 GT:AD:DP:GQ:PL 1/1:1,179:180:99:5630,528,0 chr1 170533376 . A G 528.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.42;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,15:15:45:557,45,0 chr1 170542463 . T C 745.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.661;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=2.987;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.56;ReadPosRankSum=1.311;SOR=0.333 GT:AD:DP:GQ:PL 0/1:28,27:55:99:774,0,856 chr1 170552235 . G A 2862.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2891,264,0 chr1 170663970 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 170663978 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 170664001 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 170666938 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 170957955 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 170957956 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 170986898 . T C 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.94;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:108,0,30 chr1 171092849 . A G 971.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.884;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=3.153;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.30;ReadPosRankSum=-0.462;SOR=1.074 GT:AD:DP:GQ:PL 0/1:51,35:86:99:1000,0,1482 chr1 171101331 . G T 316.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.497;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.40;ReadPosRankSum=-1.080;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,10:12:47:345,0,47 chr1 171103721 . G T 637.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.489;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=3.404;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.18;ReadPosRankSum=1.797;SOR=1.200 GT:AD:DP:GQ:PL 0/1:54,24:78:99:666,0,1510 chr1 171107825 . G A 1030.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.664;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.900;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.21;ReadPosRankSum=-0.438;SOR=0.560 GT:AD:DP:GQ:PL 0/1:38,40:78:99:1059,0,1046 chr1 171108024 . G A 1086.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.647;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.49;ReadPosRankSum=-0.051;SOR=0.748 GT:AD:DP:GQ:PL 0/1:39,36:75:99:1115,0,1140 chr1 171108057 . G A 1506.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.296;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=1.836;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=-0.319;SOR=0.958 GT:AD:DP:GQ:PL 0/1:65,50:115:99:1535,0,1832 chr1 171114034 . C T 2739.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.217;ClippingRankSum=0.000;DP=227;ExcessHet=3.0103;FS=3.841;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=1.088;SOR=0.478 GT:AD:DP:GQ:PL 0/1:119,107:226:99:2768,0,3112 chr1 171114102 . A G 2678.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.205;ClippingRankSum=0.000;DP=275;ExcessHet=3.0103;FS=4.051;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.78;ReadPosRankSum=-0.959;SOR=0.780 GT:AD:DP:GQ:PL 0/1:160,114:274:99:2707,0,4120 chr1 171114397 . T C 549.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.082;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=0.368;SOR=0.811 GT:AD:DP:GQ:PL 0/1:22,19:41:99:578,0,693 chr1 171143351 . C T 524.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.055;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.41;ReadPosRankSum=1.260;SOR=0.579 GT:AD:DP:GQ:PL 0/1:27,19:46:99:553,0,841 chr1 171146344 . A G 445.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.370;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.61;ReadPosRankSum=0.139;SOR=0.859 GT:AD:DP:GQ:PL 0/1:26,16:42:99:474,0,755 chr1 171146428 . G A 592.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.036;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.14;ReadPosRankSum=1.347;SOR=0.618 GT:AD:DP:GQ:PL 0/1:54,29:83:99:621,0,1369 chr1 171146506 . G T 513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.508;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=9.629;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.01;ReadPosRankSum=0.262;SOR=2.235 GT:AD:DP:GQ:PL 0/1:38,19:57:99:542,0,1126 chr1 171147411 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr1 171147464 . G T 294.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.069;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.04;ReadPosRankSum=0.322;SOR=0.610 GT:AD:DP:GQ:PL 0/1:11,10:21:99:323,0,385 chr1 171147621 . C T 3027.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.835;ClippingRankSum=0.000;DP=213;ExcessHet=3.0103;FS=0.532;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=1.442;SOR=0.752 GT:AD:DP:GQ:PL 0/1:102,109:211:99:3056,0,2733 chr1 171149701 . G A 1401.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.384;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=3.516;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.49;ReadPosRankSum=0.274;SOR=1.043 GT:AD:DP:GQ:PL 0/1:68,54:122:99:1430,0,1948 chr1 171149882 . T C 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.207;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=0.852;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,6:12:99:180,0,215 chr1 171149909 . C T 124.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=1.282;SOR=0.148 GT:AD:DP:GQ:PL 0/1:4,4:8:99:153,0,142 chr1 171149920 . G A 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:33:123,0,33 chr1 171150061 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 171151822 . T C 1050.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.549;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=6.108;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.12;ReadPosRankSum=0.074;SOR=0.074 GT:AD:DP:GQ:PL 0/1:26,32:58:99:1079,0,819 chr1 171152034 . A G 4817.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.394;ClippingRankSum=0.000;DP=360;ExcessHet=3.0103;FS=0.796;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.46;ReadPosRankSum=-0.036;SOR=0.647 GT:AD:DP:GQ:PL 0/1:178,180:358:99:4846,0,4537 chr1 171152129 . G A 3481.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.706;ClippingRankSum=0.000;DP=244;ExcessHet=3.0103;FS=0.473;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.27;ReadPosRankSum=-0.162;SOR=0.635 GT:AD:DP:GQ:PL 0/1:117,127:244:99:3510,0,3415 chr1 171152282 . G T 1331.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.919;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=1.620;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.58;ReadPosRankSum=-1.075;SOR=0.898 GT:AD:DP:GQ:PL 0/1:70,45:115:99:1360,0,1997 chr1 171185820 . A G 2665.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.332;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=1.853;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.60;ReadPosRankSum=-1.060;SOR=0.568 GT:AD:DP:GQ:PL 0/1:95,101:196:99:2694,0,2687 chr1 171185964 . C T 633.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.912;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=2.960;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.11;ReadPosRankSum=-0.748;SOR=0.180 GT:AD:DP:GQ:PL 0/1:14,21:35:99:662,0,476 chr1 171199163 . G C 125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.921;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.98;ReadPosRankSum=-1.081;SOR=0.307 GT:AD:DP:GQ:PL 0/1:9,5:14:99:154,0,334 chr1 171199445 . C T 1369.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.275;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=7.781;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.11;ReadPosRankSum=-1.038;SOR=1.556 GT:AD:DP:GQ:PL 0/1:48,37:85:99:1398,0,2679 chr1 171199446 . A G 1369.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.956;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=6.144;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.50;ReadPosRankSum=-1.252;SOR=1.393 GT:AD:DP:GQ:PL 0/1:46,37:83:99:1398,0,2679 chr1 171199554 . C T 203.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.142;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.19;ReadPosRankSum=-0.326;SOR=0.255 GT:AD:DP:GQ:PL 0/1:13,7:20:99:232,0,449 chr1 171207980 . T C 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=1.383;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,137 chr1 171208951 . C T 952.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.73;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,31:31:93:981,93,0 chr1 171304791 . G A 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.189;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.97;ReadPosRankSum=0.000;SOR=2.833 GT:AD:DP:GQ:PL 0/1:4,3:7:49:105,0,49 chr1 171337184 . C T 381.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.011;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=3.654;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.57;ReadPosRankSum=-0.834;SOR=1.501 GT:AD:DP:GQ:PL 0/1:20,13:33:99:410,0,566 chr1 171341864 . A C 1060.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.686;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=1.763;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.19;ReadPosRankSum=0.468;SOR=0.515 GT:AD:DP:GQ:PL 0/1:40,47:87:99:1089,0,926 chr1 171392303 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 171392401 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 171461952 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 171477556 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 171497092 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 171509567 . T A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.16;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 171509590 . T G 193.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.45;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:222,15,0 chr1 171512453 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 171513547 . A T 308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.928;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.654;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.65;ReadPosRankSum=0.200;SOR=1.061 GT:AD:DP:GQ:PL 0/1:20,12:32:99:337,0,569 chr1 171513560 . G C 275.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.448;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.51;ReadPosRankSum=0.569;SOR=0.804 GT:AD:DP:GQ:PL 0/1:18,11:29:99:304,0,528 chr1 171514578 . A C 2529.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.738;ClippingRankSum=0.000;DP=202;ExcessHet=3.0103;FS=0.575;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.52;ReadPosRankSum=0.198;SOR=0.772 GT:AD:DP:GQ:PL 0/1:112,90:202:99:2558,0,3238 chr1 171514840 . A G 711.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.539;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=2.347;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.96;ReadPosRankSum=-0.188;SOR=0.242 GT:AD:DP:GQ:PL 0/1:28,23:51:99:740,0,934 chr1 171517773 . G A 2014.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.917;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=3.305;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.99;ReadPosRankSum=-0.329;SOR=1.033 GT:AD:DP:GQ:PL 0/1:53,73:126:99:2043,0,1295 chr1 171527613 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.05;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 171527756 . A G 1954.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.58;SOR=1.688 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1983,180,0 chr1 171534796 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.10;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 171534797 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.16;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 171536385 . G A 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.227;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.41;ReadPosRankSum=-0.799;SOR=0.105 GT:AD:DP:GQ:PL 0/1:8,6:14:99:174,0,280 chr1 171536472 . A C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 171537122 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 171537961 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 171537964 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 171539875 . T C 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=1.142;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,218 chr1 171539919 . G A 905.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=4.091 GT:AD:DP:GQ:PL 1/1:0,24:24:72:934,72,0 chr1 171540188 . G A 3626.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.38;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3655,336,0 chr1 171541900 . C G 3253.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.25;SOR=1.167 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3282,285,0 chr1 171545592 . C G 1218.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.02;SOR=1.259 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1247,125,0 chr1 171550348 . A C 702.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.28;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,20:20:60:731,60,0 chr1 171557431 . G A 4602.77 PASS AC=2;AF=1.00;AN=2;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.84;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,136:136:99:4631,408,0 chr1 171558183 . A G 1408.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.33;SOR=2.948 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1437,120,0 chr1 171566170 . T C 381.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.032;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.09;ReadPosRankSum=0.555;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,12:19:99:410,0,235 chr1 171566434 . T C 538.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.108;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=2.625;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.56;ReadPosRankSum=0.629;SOR=1.112 GT:AD:DP:GQ:PL 0/1:29,22:51:99:567,0,813 chr1 171574724 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 171577694 . C A 550.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.720;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.36;ReadPosRankSum=-1.673;SOR=1.022 GT:AD:DP:GQ:PL 0/1:10,20:30:99:579,0,226 chr1 171579633 . A G 305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.645;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.11;ReadPosRankSum=2.044;SOR=1.244 GT:AD:DP:GQ:PL 0/1:6,10:16:99:334,0,203 chr1 171579729 . T C 468.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.30;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:497,39,0 chr1 171584639 . A G 234.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.34;ReadPosRankSum=1.795;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:263,0,134 chr1 171584712 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 171587026 . G C 3985.77 PASS AC=2;AF=1.00;AN=2;DP=127;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.89;SOR=1.360 GT:AD:DP:GQ:PL 1/1:0,125:125:99:4014,374,0 chr1 171589377 . C T 2955.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.03;SOR=2.642 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2984,243,0 chr1 171589934 . G A 56.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=14.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:84,12,0 chr1 171638562 . C T 2967.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.72;SOR=1.691 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2996,264,0 chr1 171648253 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 171651780 . T A 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.04;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 171680457 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 171684725 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.35;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 171684727 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.18;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 171706680 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 171710818 . G A 1127.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.48;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1156,110,0 chr1 171738132 . T C 475.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.61;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:504,36,0 chr1 171766058 . A C 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 171766065 . G A 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 171781634 . C T 1848.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.85;SOR=7.701 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1877,138,0 chr1 171781911 . A G 10565.77 PASS AC=2;AF=1.00;AN=2;DP=321;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.92;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,321:321:99:10594,963,0 chr1 171782096 . T C 4357.77 PASS AC=2;AF=1.00;AN=2;DP=130;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.52;SOR=1.452 GT:AD:DP:GQ:PL 1/1:0,130:130:99:4386,390,0 chr1 171782276 . G A 480.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.54;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:509,39,0 chr1 171782299 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.52;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 171782583 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 171783899 . A G 7144.77 PASS AC=2;AF=1.00;AN=2;DP=218;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.77;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,218:218:99:7173,655,0 chr1 171785659 . G A 489.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.98;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:518,42,0 chr1 171785725 . A G 1319.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.73;SOR=2.554 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1348,114,0 chr1 171786030 . G A 5094.77 PASS AC=2;AF=1.00;AN=2;DP=160;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.84;SOR=1.522 GT:AD:DP:GQ:PL 1/1:0,160:160:99:5123,483,0 chr1 171794382 . C A 4182.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.57;SOR=2.362 GT:AD:DP:GQ:PL 1/1:0,121:121:99:4211,364,0 chr1 171796451 . G A 5446.77 PASS AC=2;AF=1.00;AN=2;DP=166;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.81;SOR=1.525 GT:AD:DP:GQ:PL 1/1:0,166:166:99:5475,498,0 chr1 171841820 . A G 488.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.295;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.55;ReadPosRankSum=1.608;SOR=0.382 GT:AD:DP:GQ:PL 0/1:10,15:25:99:517,0,330 chr1 171845488 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 171974808 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 171987663 . C T 374.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.171;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=1.664;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.92;ReadPosRankSum=-1.065;SOR=0.317 GT:AD:DP:GQ:PL 0/1:14,15:29:99:403,0,371 chr1 171988933 . C T 709.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.503;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=8.203;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.79;ReadPosRankSum=-0.731;SOR=0.120 GT:AD:DP:GQ:PL 0/1:22,26:48:99:738,0,675 chr1 172032868 . T C 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr1 172038236 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 172041919 . G A 783.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.227;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.68;ReadPosRankSum=0.821;SOR=0.489 GT:AD:DP:GQ:PL 0/1:21,26:47:99:812,0,702 chr1 172042255 . A G 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=0.524;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr1 172068939 . T C 2014.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.954;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=1.381;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.29;ReadPosRankSum=-0.179;SOR=0.859 GT:AD:DP:GQ:PL 0/1:67,74:141:99:2043,0,1691 chr1 172131456 . G T 74.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.46;ReadPosRankSum=-0.385;SOR=2.093 GT:AD:DP:GQ:PL 0/1:3,3:6:99:103,0,107 chr1 172131691 . G A 598.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.540;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.47;ReadPosRankSum=-0.045;SOR=0.873 GT:AD:DP:GQ:PL 0/1:24,24:48:99:627,0,660 chr1 172328742 . G T 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 172328754 . T C 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 172339098 . C T 770.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.53;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:83:799,83,0 chr1 172339193 . A G 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.241;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=2.232;SOR=0.859 GT:AD:DP:GQ:PL 0/1:7,8:15:99:221,0,179 chr1 172353104 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 172387297 . A G 2618.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.15;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2647,237,0 chr1 172407669 . T C 191.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.705;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.831;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.59;ReadPosRankSum=-0.651;SOR=2.247 GT:AD:DP:GQ:PL 0/1:13,7:20:99:220,0,381 chr1 172407906 . G A 203.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.134;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=1.624;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.66;ReadPosRankSum=-0.461;SOR=1.329 GT:AD:DP:GQ:PL 0/1:26,10:36:99:232,0,706 chr1 172418293 . T G 859.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.243;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=1.111;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.53;ReadPosRankSum=-0.270;SOR=0.515 GT:AD:DP:GQ:PL 0/1:21,31:52:99:888,0,539 chr1 172421511 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 172441827 . G A 2203.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.338;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=4.879;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.24;ReadPosRankSum=-1.263;SOR=1.075 GT:AD:DP:GQ:PL 0/1:100,80:180:99:2232,0,2743 chr1 172442356 . A G 2661.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.83;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2690,216,0 chr1 172442628 . T C 1691.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.297;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=0.010;SOR=0.746 GT:AD:DP:GQ:PL 0/1:77,69:146:99:1720,0,2243 chr1 172448418 . G A 1024.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.939;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=8.560;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.04;ReadPosRankSum=-0.676;SOR=0.188 GT:AD:DP:GQ:PL 0/1:32,41:73:99:1053,0,832 chr1 172448641 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 172453069 . C T 859.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.808;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.836;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.66;ReadPosRankSum=-0.191;SOR=0.801 GT:AD:DP:GQ:PL 0/1:54,35:89:99:888,0,1431 chr1 172453265 . G A 972.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.725;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.93;ReadPosRankSum=1.572;SOR=0.656 GT:AD:DP:GQ:PL 0/1:51,38:89:99:1001,0,1492 chr1 172453509 . A G 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.849;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.27;ReadPosRankSum=-1.073;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,9:14:99:298,0,165 chr1 172456637 . G A 110.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.85;ReadPosRankSum=-1.068;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:139,0,143 chr1 172462070 . G A 522.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.78;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:551,42,0 chr1 172462193 . A G 1374.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.513;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.75;ReadPosRankSum=-0.606;SOR=0.598 GT:AD:DP:GQ:PL 0/1:50,50:100:99:1403,0,1534 chr1 172462246 . G A 2312.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.705;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=1.933;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.52;ReadPosRankSum=-0.236;SOR=0.871 GT:AD:DP:GQ:PL 0/1:80,91:171:99:2341,0,1927 chr1 172465169 . G A 303.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.89;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:332,24,0 chr1 172465235 . G A 1365.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.68;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1394,105,0 chr1 172465238 . C A 285.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.684;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.16;ReadPosRankSum=-1.982;SOR=0.397 GT:AD:DP:GQ:PL 0/1:23,12:35:99:314,0,738 chr1 172468452 . G A 2769.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.81;QD=34.19;SOR=1.952 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2798,243,0 chr1 172468768 . G A 165.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.84;ReadPosRankSum=-2.227;SOR=0.473 GT:AD:DP:GQ:PL 0/1:8,6:14:99:194,0,292 chr1 172526513 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 172526531 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 172665594 . T C 3365.77 PASS AC=2;AF=1.00;AN=2;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.88;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,109:109:99:3394,327,0 chr1 172690695 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 173084327 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 173188402 . T C 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-0.566;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 173358054 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 173407340 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 173503412 . T C 203.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.058;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.800;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=-1.506;SOR=1.356 GT:AD:DP:GQ:PL 0/1:16,9:25:99:232,0,423 chr1 173503550 . A G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.674;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 173505123 . G A 395.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.144;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.66;ReadPosRankSum=-1.021;SOR=1.179 GT:AD:DP:GQ:PL 0/1:14,13:27:99:424,0,423 chr1 173505290 . T C 1473.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.735;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=0.707;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.28;ReadPosRankSum=1.680;SOR=0.592 GT:AD:DP:GQ:PL 0/1:55,56:111:99:1502,0,1589 chr1 173506534 . G C 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.75;ReadPosRankSum=0.090;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:93:224,0,93 chr1 173509509 . T C 218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.349;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.89;ReadPosRankSum=-0.361;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:247,0,122 chr1 173524173 . A G 461.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.753;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.39;ReadPosRankSum=0.409;SOR=0.199 GT:AD:DP:GQ:PL 0/1:15,15:30:99:490,0,531 chr1 173524209 . T C 292.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.464;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.91;ReadPosRankSum=-0.849;SOR=1.329 GT:AD:DP:GQ:PL 0/1:5,9:14:99:321,0,167 chr1 173534725 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 173547732 . G C 831.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.070;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=1.889;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.80;ReadPosRankSum=-0.316;SOR=0.996 GT:AD:DP:GQ:PL 0/1:40,37:77:99:860,0,988 chr1 173547764 . A G 727.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.691;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=7.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.93;ReadPosRankSum=0.652;SOR=1.744 GT:AD:DP:GQ:PL 0/1:32,29:61:99:756,0,801 chr1 173554935 . C G 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.75;ReadPosRankSum=0.876;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:98:224,0,98 chr1 173554968 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 173583644 . G A 353.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.849;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=1.824;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.38;ReadPosRankSum=0.697;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,16:23:99:382,0,212 chr1 173587560 . G T 596.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.14;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:625,45,0 chr1 173600037 . T C 194.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.618;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.46;ReadPosRankSum=-0.425;SOR=0.446 GT:AD:DP:GQ:PL 0/1:8,9:17:99:223,0,215 chr1 173625074 . T C 480.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.03;ReadPosRankSum=-0.558;SOR=1.051 GT:AD:DP:GQ:PL 0/1:10,14:24:99:509,0,345 chr1 173670258 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 173733625 . C T 561.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.875;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=1.458;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.95;ReadPosRankSum=0.683;SOR=0.382 GT:AD:DP:GQ:PL 0/1:25,22:47:99:590,0,762 chr1 173734534 . A T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 173755803 . A G 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.29;ReadPosRankSum=-0.026;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,7:13:99:253,0,211 chr1 173766431 . A G 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.549;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.98;ReadPosRankSum=0.571;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:244,0,173 chr1 173810981 . A G 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-0.566;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 173856554 . T G 591.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.211;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.73;ReadPosRankSum=0.539;SOR=0.976 GT:AD:DP:GQ:PL 0/1:13,17:30:99:620,0,432 chr1 173866073 . C T 1000.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.803;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.85;ReadPosRankSum=-0.488;SOR=0.693 GT:AD:DP:GQ:PL 0/1:14,34:48:99:1029,0,372 chr1 173866209 . G A 803.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.723;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.46;ReadPosRankSum=0.502;SOR=0.760 GT:AD:DP:GQ:PL 0/1:21,31:52:99:832,0,549 chr1 173867056 . G A 831.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.400;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=2.210;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.80;ReadPosRankSum=0.917;SOR=1.065 GT:AD:DP:GQ:PL 0/1:45,32:77:99:860,0,1285 chr1 173867464 . G A 280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.273;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=-0.565;SOR=1.214 GT:AD:DP:GQ:PL 0/1:13,9:22:99:309,0,443 chr1 173870102 . C T 629.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.428;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.15;ReadPosRankSum=0.545;SOR=0.532 GT:AD:DP:GQ:PL 0/1:18,21:39:99:658,0,566 chr1 173873329 . A G 323.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.714;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.72;ReadPosRankSum=1.157;SOR=1.473 GT:AD:DP:GQ:PL 0/1:12,10:22:99:352,0,381 chr1 173886160 . A T 1427.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.071;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=10.203;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.90;ReadPosRankSum=2.071;SOR=1.657 GT:AD:DP:GQ:PL 0/1:81,50:131:99:1456,0,2320 chr1 173909694 . T C 3636.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.099;ClippingRankSum=0.000;DP=323;ExcessHet=3.0103;FS=1.853;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.26;ReadPosRankSum=2.682;SOR=0.590 GT:AD:DP:GQ:PL 0/1:183,140:323:99:3665,0,5066 chr1 173909724 . T C 4254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.395;ClippingRankSum=0.000;DP=361;ExcessHet=3.0103;FS=0.380;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.79;ReadPosRankSum=-0.766;SOR=0.719 GT:AD:DP:GQ:PL 0/1:193,168:361:99:4283,0,5313 chr1 173911614 . C A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.253;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 173914379 . A T 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.085;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=0.060;SOR=1.609 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,137 chr1 173951838 . C T 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.11;ReadPosRankSum=2.189;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:134,0,104 chr1 174219147 . G A 1193.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.131;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=0.886;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.71;ReadPosRankSum=0.011;SOR=0.573 GT:AD:DP:GQ:PL 0/1:32,44:76:99:1222,0,756 chr1 174232357 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 174304924 . A G 1342.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.831;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=11.369;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.15;ReadPosRankSum=0.530;SOR=0.104 GT:AD:DP:GQ:PL 0/1:25,49:74:99:1371,0,742 chr1 174305211 . T G 1348.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.004;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=1.860;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.76;ReadPosRankSum=-0.257;SOR=0.445 GT:AD:DP:GQ:PL 0/1:49,49:98:99:1377,0,1376 chr1 174370832 . A G 242.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.883;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.56;ReadPosRankSum=0.238;SOR=0.346 GT:AD:DP:GQ:PL 0/1:13,8:21:99:271,0,468 chr1 174393764 . C A 204.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.143;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.06;ReadPosRankSum=0.143;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:233,0,137 chr1 174393827 . T C 527.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.316;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.49;ReadPosRankSum=0.969;SOR=0.249 GT:AD:DP:GQ:PL 0/1:15,17:32:99:556,0,518 chr1 174448093 . G A 5717.77 PASS AC=2;AF=1.00;AN=2;DP=180;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.94;SOR=1.098 GT:AD:DP:GQ:PL 1/1:0,179:179:99:5746,535,0 chr1 174474598 . T G 80.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0 chr1 174547861 . C T 1059.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.267;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=4.043;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.30;ReadPosRankSum=0.034;SOR=0.283 GT:AD:DP:GQ:PL 0/1:25,40:65:99:1088,0,675 chr1 174559995 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 174850239 . C G 281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.636;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.61;ReadPosRankSum=0.000;SOR=0.343 GT:AD:DP:GQ:PL 0/1:5,11:16:95:310,0,95 chr1 174958251 . G C 1530.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.94;SOR=5.084 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1559,117,0 chr1 174990183 . C T 482.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.99;ReadPosRankSum=-0.032;SOR=1.426 GT:AD:DP:GQ:PL 0/1:8,15:23:99:511,0,264 chr1 175000135 . C T 725.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.584;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.30;ReadPosRankSum=-1.201;SOR=0.836 GT:AD:DP:GQ:PL 0/1:31,28:59:99:754,0,777 chr1 175014497 . T C 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.68;ReadPosRankSum=0.180;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:145,0,104 chr1 175045114 . A G 852.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.504;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=2.022;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.93;ReadPosRankSum=-1.620;SOR=0.949 GT:AD:DP:GQ:PL 0/1:44,34:78:99:881,0,1300 chr1 175045421 . T C 1129.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.16;SOR=2.694 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1158,93,0 chr1 175045471 . T C 213.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.878;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=5.880;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.27;ReadPosRankSum=0.000;SOR=0.082 GT:AD:DP:GQ:PL 0/1:3,11:14:79:242,0,79 chr1 175117325 . A G 1340.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.361;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.97;ReadPosRankSum=-1.064;SOR=0.485 GT:AD:DP:GQ:PL 0/1:38,41:79:99:1369,0,1315 chr1 175118541 . G A 2218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.313;ClippingRankSum=0.000;DP=208;ExcessHet=3.0103;FS=1.135;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.67;ReadPosRankSum=-1.011;SOR=0.792 GT:AD:DP:GQ:PL 0/1:118,90:208:99:2247,0,3341 chr1 175118593 . T C 2867.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.511;ClippingRankSum=0.000;DP=257;ExcessHet=3.0103;FS=0.970;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.25;ReadPosRankSum=0.703;SOR=0.759 GT:AD:DP:GQ:PL 0/1:145,110:255:99:2896,0,4027 chr1 175119051 . G A 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=1.201;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:173,0,256 chr1 175123538 . C T 7451.77 PASS AC=2;AF=1.00;AN=2;DP=222;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.72;SOR=1.347 GT:AD:DP:GQ:PL 1/1:0,221:221:99:7480,662,0 chr1 175123704 . T C 9372.77 PASS AC=2;AF=1.00;AN=2;DP=293;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.21;SOR=1.144 GT:AD:DP:GQ:PL 1/1:0,291:291:99:9401,871,0 chr1 175125684 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.10;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 175127197 . A G 2708.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.29;SOR=2.720 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2737,237,0 chr1 175127253 . C T 925.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.16;SOR=6.439 GT:AD:DP:GQ:PL 1/1:0,24:24:72:954,72,0 chr1 175128213 . C T 7385.77 PASS AC=2;AF=1.00;AN=2;DP=210;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.72;SOR=1.223 GT:AD:DP:GQ:PL 1/1:0,207:207:99:7414,622,0 chr1 175135583 . T C 929.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.51;SOR=6.439 GT:AD:DP:GQ:PL 1/1:0,24:24:72:958,72,0 chr1 175135654 . T C 3751.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.51;SOR=4.565 GT:AD:DP:GQ:PL 1/1:0,84:84:99:3780,253,0 chr1 175135660 . G T 3847.77 PASS AC=2;AF=1.00;AN=2;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.60;SOR=4.382 GT:AD:DP:GQ:PL 1/1:0,87:87:99:3876,262,0 chr1 175136744 . G A 2546.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.96;SOR=1.771 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2575,225,0 chr1 175136806 . G A 4191.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=1.411 GT:AD:DP:GQ:PL 1/1:0,125:125:99:4220,375,0 chr1 175144442 . T C 6608.77 PASS AC=2;AF=1.00;AN=2;DP=200;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.04;SOR=1.449 GT:AD:DP:GQ:PL 1/1:0,200:200:99:6637,601,0 chr1 175147116 . C G 3396.77 PASS AC=2;AF=1.00;AN=2;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.63;SOR=2.678 GT:AD:DP:GQ:PL 1/1:0,101:101:99:3425,302,0 chr1 175160555 . G T 913.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.34;SOR=3.528 GT:AD:DP:GQ:PL 1/1:0,25:25:75:942,75,0 chr1 175160810 . C T 3825.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-1.201;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.15;SOR=1.473 GT:AD:DP:GQ:PL 1/1:2,117:119:99:3854,265,0 chr1 175161140 . G A 1962.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.84;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1991,174,0 chr1 175166693 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 175171183 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 175198931 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 175202849 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 175242436 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 175311727 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 175311790 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 175311884 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 175315076 . T C 203.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:24:232,24,0 chr1 175324288 . T C 536.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.738;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.51;ReadPosRankSum=0.409;SOR=1.030 GT:AD:DP:GQ:PL 0/1:20,17:37:99:565,0,640 chr1 175330165 . T C 2220.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.469;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=1.335;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.71;ReadPosRankSum=-2.524;SOR=0.873 GT:AD:DP:GQ:PL 0/1:81,81:162:99:2249,0,2184 chr1 175337400 . A G 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.48;ReadPosRankSum=0.637;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:173,0,179 chr1 175354310 . A G 811.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.181;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.88;ReadPosRankSum=-2.166;SOR=1.055 GT:AD:DP:GQ:PL 0/1:18,25:43:99:840,0,623 chr1 175355385 . A T 832.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.288;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=1.056;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.65;ReadPosRankSum=-0.318;SOR=0.533 GT:AD:DP:GQ:PL 0/1:37,24:61:99:861,0,2710 chr1 175355515 . A G 1336.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.754;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.48;ReadPosRankSum=-0.851;SOR=0.732 GT:AD:DP:GQ:PL 0/1:79,62:141:99:1365,0,2158 chr1 175359947 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 175362985 . G T 275.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.612;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.79;ReadPosRankSum=1.873;SOR=1.460 GT:AD:DP:GQ:PL 0/1:11,9:20:99:304,0,365 chr1 175363045 . G C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 175366098 . C T 4246.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.574;ClippingRankSum=0.000;DP=331;ExcessHet=3.0103;FS=1.877;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.83;ReadPosRankSum=-2.701;SOR=0.808 GT:AD:DP:GQ:PL 0/1:172,159:331:99:4275,0,4805 chr1 175366276 . A C 412.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.237;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=7.533;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.79;ReadPosRankSum=0.455;SOR=0.048 GT:AD:DP:GQ:PL 0/1:20,15:35:99:441,0,718 chr1 175367156 . C A 439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.118;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.14;ReadPosRankSum=-0.963;SOR=0.859 GT:AD:DP:GQ:PL 0/1:38,16:54:99:468,0,1251 chr1 175367169 . G C 471.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.071;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=1.314;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.61;ReadPosRankSum=0.701;SOR=1.096 GT:AD:DP:GQ:PL 0/1:44,18:62:99:500,0,1413 chr1 175367394 . T C 1617.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.344;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=1.700;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.86;ReadPosRankSum=0.450;SOR=0.976 GT:AD:DP:GQ:PL 0/1:44,58:102:99:1646,0,1153 chr1 175367483 . T C 552.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.213;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=1.145;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.76;ReadPosRankSum=-0.578;SOR=0.527 GT:AD:DP:GQ:PL 0/1:25,22:47:99:581,0,767 chr1 175379326 . T G 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=-0.313;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,179 chr1 175379407 . T C 530.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.428;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.435;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=0.347;SOR=0.437 GT:AD:DP:GQ:PL 0/1:21,20:41:99:559,0,658 chr1 175379587 . C T 2056.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.037;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=5.803;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.62;ReadPosRankSum=-0.206;SOR=1.117 GT:AD:DP:GQ:PL 0/1:88,75:163:99:2085,0,2551 chr1 175379918 . A C 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-0.921;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr1 175385992 . C G 1015.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.060;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=2.217;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.37;ReadPosRankSum=-0.560;SOR=1.066 GT:AD:DP:GQ:PL 0/1:39,37:76:99:1044,0,1116 chr1 175386016 . C T 1269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.011;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=4.067;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=1.579;SOR=1.154 GT:AD:DP:GQ:PL 0/1:61,48:109:99:1298,0,1771 chr1 175386255 . A G 1987.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.288;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=6.232;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.20;ReadPosRankSum=0.402;SOR=1.028 GT:AD:DP:GQ:PL 0/1:75,65:140:99:2016,0,2140 chr1 175386482 . T C 656.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.913;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=1.179;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=0.551;SOR=0.513 GT:AD:DP:GQ:PL 0/1:24,27:51:99:685,0,642 chr1 175391554 . C T 1038.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.913;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=2.759;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.93;ReadPosRankSum=0.651;SOR=0.448 GT:AD:DP:GQ:PL 0/1:53,42:95:99:1067,0,1347 chr1 175393600 . G A 421.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.357;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=5.315;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.81;ReadPosRankSum=0.727;SOR=3.334 GT:AD:DP:GQ:PL 0/1:5,12:17:99:450,0,124 chr1 175406547 . T C 4991.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.954;ClippingRankSum=0.000;DP=392;ExcessHet=3.0103;FS=1.643;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=-0.223;SOR=0.797 GT:AD:DP:GQ:PL 0/1:208,184:392:99:5020,0,5492 chr1 175406666 . T C 5721.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.345;ClippingRankSum=0.000;DP=449;ExcessHet=3.0103;FS=0.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.77;ReadPosRankSum=0.771;SOR=0.635 GT:AD:DP:GQ:PL 0/1:234,214:448:99:5750,0,6181 chr1 175545941 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 175621240 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 175621454 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 175649521 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 175649660 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 175666887 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 175670222 . G C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 175696015 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 175712768 . T G 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr1 175726486 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 175773300 . G T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.04;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 175851378 . A G 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr1 175907143 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.50;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 175907144 . G T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.84;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 175942261 . T C 649.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.03;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:678,51,0 chr1 175945395 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 175947131 . T C 4792.77 PASS AC=2;AF=1.00;AN=2;DP=153;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,152:152:99:4821,454,0 chr1 175968179 . T G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 175968404 . C T 4524.77 PASS AC=2;AF=1.00;AN=2;DP=142;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.86;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,142:142:99:4553,425,0 chr1 175982211 . T A 1433.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.97;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1462,123,0 chr1 175986598 . T A 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.07;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 176043671 . G A 522.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.18;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:551,42,0 chr1 176063340 . A G 49.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.43;QD=24.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:77,6,0 chr1 176079505 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 176081002 . G A 135.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:163,12,0 chr1 176124395 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 176133838 . T C 403.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.153;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.35;ReadPosRankSum=-0.409;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,16:22:99:432,0,150 chr1 176134818 . C T 502.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.196;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=0.327;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,18:28:99:531,0,260 chr1 176149083 . G A 181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.244;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.57;ReadPosRankSum=-1.866;SOR=0.551 GT:AD:DP:GQ:PL 0/1:10,9:19:99:210,0,258 chr1 176160140 . G A 1496.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.892;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=3.552;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.25;ReadPosRankSum=0.398;SOR=0.421 GT:AD:DP:GQ:PL 0/1:52,61:113:99:1525,0,1327 chr1 176163156 . C T 545.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.10;SOR=2.179 GT:AD:DP:GQ:PL 1/1:0,17:17:51:574,51,0 chr1 176176141 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 176184522 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 176508631 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 176556058 . G A 178.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.75;ReadPosRankSum=-1.611;SOR=0.569 GT:AD:DP:GQ:PL 0/1:7,6:13:99:207,0,249 chr1 176602955 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 176603003 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 176690327 . C T 3071.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.665;ClippingRankSum=0.000;DP=280;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.05;ReadPosRankSum=0.169;SOR=0.679 GT:AD:DP:GQ:PL 0/1:160,118:278:99:3100,0,4383 chr1 176690654 . T C 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.465;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.18;ReadPosRankSum=1.320;SOR=2.494 GT:AD:DP:GQ:PL 0/1:6,9:15:99:331,0,171 chr1 176695706 . C A 1066.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.857;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=1.800;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.00;ReadPosRankSum=0.551;SOR=0.485 GT:AD:DP:GQ:PL 0/1:57,40:97:99:1095,0,1599 chr1 176702485 . G A 507.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.067;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.93;ReadPosRankSum=-0.600;SOR=0.199 GT:AD:DP:GQ:PL 0/1:15,15:30:99:536,0,504 chr1 176702784 . A T 148.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.189;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=10.346;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.38;SOR=2.939 GT:AD:DP:GQ:PL 0/1:34,10:44:99:177,0,1114 chr1 176765620 . C T 3359.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.435;ClippingRankSum=0.000;DP=220;ExcessHet=3.0103;FS=10.800;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.41;ReadPosRankSum=2.098;SOR=1.319 GT:AD:DP:GQ:PL 0/1:98,120:218:99:3388,0,2482 chr1 176787718 . G C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 176800222 . T C 639.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.047;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.42;ReadPosRankSum=0.332;SOR=0.877 GT:AD:DP:GQ:PL 0/1:33,23:56:99:668,0,967 chr1 176867082 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 176868681 . A G 101.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.25;ReadPosRankSum=0.651;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:99:130,0,255 chr1 176876250 . C T 415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.312;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.67;ReadPosRankSum=-0.017;SOR=0.627 GT:AD:DP:GQ:PL 0/1:26,17:43:99:444,0,721 chr1 176876274 . G C 593.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.645;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.20;ReadPosRankSum=-2.036;SOR=0.653 GT:AD:DP:GQ:PL 0/1:31,22:53:99:622,0,897 chr1 176876392 . C T 2137.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.103;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=9.076;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.83;ReadPosRankSum=0.870;SOR=1.501 GT:AD:DP:GQ:PL 0/1:56,71:127:99:2166,0,1534 chr1 176882611 . G A 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.000;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 176888211 . A G 2963.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.140;ClippingRankSum=0.000;DP=187;ExcessHet=3.0103;FS=1.851;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.85;ReadPosRankSum=0.611;SOR=0.568 GT:AD:DP:GQ:PL 0/1:83,104:187:99:2992,0,2248 chr1 176888362 . G A 744.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.189;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=5.914;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.73;ReadPosRankSum=-1.780;SOR=1.880 GT:AD:DP:GQ:PL 0/1:18,24:42:99:773,0,557 chr1 176894700 . G C 1296.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.909;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=2.713;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.80;ReadPosRankSum=1.398;SOR=0.499 GT:AD:DP:GQ:PL 0/1:47,47:94:99:1325,0,1407 chr1 176894731 . T C 1292.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.916;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=1.742;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.86;ReadPosRankSum=-0.906;SOR=0.826 GT:AD:DP:GQ:PL 0/1:39,48:87:99:1321,0,1162 chr1 176936064 . A G 844.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.025;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=5.511;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.60;ReadPosRankSum=0.087;SOR=2.621 GT:AD:DP:GQ:PL 0/1:16,25:41:99:873,0,443 chr1 176944202 . T C 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.55;ReadPosRankSum=-0.842;SOR=0.061 GT:AD:DP:GQ:PL 0/1:3,2:5:71:71,0,236 chr1 176945886 . A G 1971.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.219;ClippingRankSum=0.000;DP=154;ExcessHet=3.0103;FS=1.361;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.80;ReadPosRankSum=0.174;SOR=0.824 GT:AD:DP:GQ:PL 0/1:80,74:154:99:2000,0,2231 chr1 176949368 . A G 3304.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.218;ClippingRankSum=0.000;DP=294;ExcessHet=3.0103;FS=2.574;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.28;ReadPosRankSum=-0.634;SOR=0.868 GT:AD:DP:GQ:PL 0/1:164,129:293:99:3333,0,4506 chr1 176949539 . T G 402.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.134;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.33;ReadPosRankSum=1.676;SOR=0.909 GT:AD:DP:GQ:PL 0/1:25,14:39:99:431,0,793 chr1 176958790 . G A 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.94;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:104,0,30 chr1 176965253 . T A 1090.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.537;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.98;ReadPosRankSum=-0.218;SOR=0.649 GT:AD:DP:GQ:PL 0/1:38,40:78:99:1119,0,1162 chr1 177023417 . A G 4332.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.216;ClippingRankSum=0.000;DP=325;ExcessHet=3.0103;FS=0.400;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.37;ReadPosRankSum=-0.770;SOR=0.718 GT:AD:DP:GQ:PL 0/1:163,161:324:99:4361,0,4431 chr1 177029171 . T C 77.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.64;ReadPosRankSum=0.366;SOR=0.495 GT:AD:DP:GQ:PL 0/1:5,4:9:99:106,0,178 chr1 177029794 . C T 1203.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.371;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=1.943;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.27;ReadPosRankSum=-0.647;SOR=0.466 GT:AD:DP:GQ:PL 0/1:31,43:74:99:1232,0,734 chr1 177030781 . G A 1740.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.374;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=0.586;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.81;ReadPosRankSum=0.639;SOR=0.636 GT:AD:DP:GQ:PL 0/1:92,69:161:99:1769,0,2353 chr1 177032760 . C G 4645.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.211;ClippingRankSum=0.000;DP=320;ExcessHet=3.0103;FS=0.415;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.52;ReadPosRankSum=-1.092;SOR=0.731 GT:AD:DP:GQ:PL 0/1:153,167:320:99:4674,0,4201 chr1 177089598 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 177089599 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 177230187 . C T 4459.77 PASS AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.41;SOR=1.163 GT:AD:DP:GQ:PL 1/1:0,142:142:99:4488,425,0 chr1 177256264 . G C 346.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.62;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:375,27,0 chr1 177289068 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 177929664 . C T 1297.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.88;SOR=3.737 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1326,105,0 chr1 177930427 . C T 553.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.13;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:582,45,0 chr1 177930963 . T C 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.35;ReadPosRankSum=-0.842;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:65:65,0,110 chr1 177932484 . G A 727.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.133;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.48;ReadPosRankSum=-0.572;SOR=0.861 GT:AD:DP:GQ:PL 0/1:29,25:54:99:756,0,832 chr1 177932520 . G A 1403.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.647;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.12;ReadPosRankSum=0.103;SOR=0.655 GT:AD:DP:GQ:PL 0/1:46,36:82:99:1432,0,1803 chr1 177932523 . C T 1400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.535;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.68;ReadPosRankSum=-0.243;SOR=0.637 GT:AD:DP:GQ:PL 0/1:46,38:84:99:1429,0,1838 chr1 177932578 . T C 1963.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.860;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=5.196;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.92;ReadPosRankSum=-0.155;SOR=1.173 GT:AD:DP:GQ:PL 0/1:79,73:152:99:1992,0,2139 chr1 177932606 . A G 5965.77 PASS AC=2;AF=1.00;AN=2;DP=180;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.14;SOR=1.481 GT:AD:DP:GQ:PL 1/1:0,180:180:99:5994,539,0 chr1 177933252 . C A 2563.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.625;ClippingRankSum=0.000;DP=230;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.15;ReadPosRankSum=0.143;SOR=0.719 GT:AD:DP:GQ:PL 0/1:125,105:230:99:2592,0,3514 chr1 177933347 . G A 2879.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.953;ClippingRankSum=0.000;DP=268;ExcessHet=3.0103;FS=1.482;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.75;ReadPosRankSum=0.112;SOR=0.798 GT:AD:DP:GQ:PL 0/1:156,112:268:99:2908,0,3890 chr1 177933590 . C T 1617.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.474;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=4.225;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.85;ReadPosRankSum=-1.454;SOR=0.784 GT:AD:DP:GQ:PL 0/1:136,70:206:99:1646,0,3869 chr1 177933618 . G C 1463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.504;ClippingRankSum=0.000;DP=204;ExcessHet=3.0103;FS=1.867;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.21;ReadPosRankSum=0.358;SOR=0.875 GT:AD:DP:GQ:PL 0/1:139,64:203:99:1492,0,3866 chr1 177937522 . G A 1835.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.357;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=10.872;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.33;ReadPosRankSum=1.214;SOR=1.112 GT:AD:DP:GQ:PL 0/1:91,71:162:99:1864,0,2500 chr1 177939717 . C T 2133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.338;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.85;ReadPosRankSum=-0.358;SOR=0.729 GT:AD:DP:GQ:PL 0/1:96,84:180:99:2162,0,2364 chr1 177941761 . A G 385.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.815;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=3.032;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.30;ReadPosRankSum=1.332;SOR=1.938 GT:AD:DP:GQ:PL 0/1:17,12:29:99:414,0,555 chr1 177944845 . T C 991.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.87;SOR=3.180 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1020,81,0 chr1 177946339 . A C 1690.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=7.593;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.66;ReadPosRankSum=-1.586;SOR=0.295 GT:AD:DP:GQ:PL 0/1:44,64:108:99:1719,0,1145 chr1 177946363 . G A 1383.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.671;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=3.276;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.34;ReadPosRankSum=0.567;SOR=0.888 GT:AD:DP:GQ:PL 0/1:68,54:122:99:1412,0,1790 chr1 177952299 . T A 1646.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.29;SOR=1.702 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1675,153,0 chr1 177958053 . A G 2535.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.427;ClippingRankSum=0.000;DP=198;ExcessHet=3.0103;FS=6.426;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.81;ReadPosRankSum=-2.436;SOR=1.153 GT:AD:DP:GQ:PL 0/1:104,94:198:99:2564,0,2972 chr1 177960419 . C T 1664.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.737;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=1.363;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.24;ReadPosRankSum=0.145;SOR=0.564 GT:AD:DP:GQ:PL 0/1:65,71:136:99:1693,0,1682 chr1 177960493 . G A 1099.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.250;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=1.950;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.64;ReadPosRankSum=0.559;SOR=0.465 GT:AD:DP:GQ:PL 0/1:46,41:87:99:1128,0,1270 chr1 177960701 . C T 735.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.445;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.25;ReadPosRankSum=1.112;SOR=1.179 GT:AD:DP:GQ:PL 0/1:6,21:27:99:764,0,170 chr1 177960805 . G A 3463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.015;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=3.877;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.58;ReadPosRankSum=-0.482;SOR=0.449 GT:AD:DP:GQ:PL 0/1:72,125:197:99:3492,0,1868 chr1 177960852 . T C 9006.77 PASS AC=2;AF=1.00;AN=2;DP=296;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.43;SOR=1.070 GT:AD:DP:GQ:PL 1/1:0,296:296:99:9035,887,0 chr1 177960961 . T C 3494.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.592;ClippingRankSum=0.000;DP=277;ExcessHet=3.0103;FS=6.692;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.62;ReadPosRankSum=1.281;SOR=0.421 GT:AD:DP:GQ:PL 0/1:138,139:277:99:3523,0,3681 chr1 177961143 . G A 208.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.728;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.88;ReadPosRankSum=-0.674;SOR=0.569 GT:AD:DP:GQ:PL 0/1:3,7:10:95:237,0,95 chr1 177961759 . C T 490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.054;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=2.731;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.46;ReadPosRankSum=-2.619;SOR=0.348 GT:AD:DP:GQ:PL 0/1:39,19:58:99:519,0,1170 chr1 177964987 . G T 616.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.112;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.12;ReadPosRankSum=0.142;SOR=0.859 GT:AD:DP:GQ:PL 0/1:24,23:47:99:645,0,687 chr1 177966140 . A G 1201.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=2.012 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1230,110,0 chr1 177967464 . T G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.674;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 177992799 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 177992948 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 177995504 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 178093604 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 178094416 . A C 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.89;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 178465717 . T C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-1.645;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 178496445 . C T 86.85 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.48;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:17:115,0,17 chr1 178503970 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 178504138 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 178513849 . T G 605.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.64;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:634,48,0 chr1 178514096 . G A 8654.77 PASS AC=2;AF=1.00;AN=2;DP=273;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.70;SOR=0.808 GT:AD:DP:GQ:PL 1/1:0,273:273:99:8683,819,0 chr1 178515699 . A G 1532.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.93;SOR=1.708 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1561,144,0 chr1 178520843 . T G 4410.77 PASS AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.84;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,143:143:99:4439,428,0 chr1 178521003 . C G 379.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.649;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.08;ReadPosRankSum=0.000;SOR=0.836 GT:AD:DP:GQ:PL 0/1:8,13:21:99:408,0,265 chr1 178523040 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 178523312 . T A 1233.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.84;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1262,120,0 chr1 178543147 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 178544760 . T G 340.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.336;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=5.065;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.74;ReadPosRankSum=-0.384;SOR=0.212 GT:AD:DP:GQ:PL 0/1:23,16:39:99:369,0,665 chr1 178545068 . C A 1685.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.869;ClippingRankSum=0.000;DP=169;ExcessHet=3.0103;FS=0.600;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.03;ReadPosRankSum=1.261;SOR=0.625 GT:AD:DP:GQ:PL 0/1:105,63:168:99:1714,0,2908 chr1 178545487 . C T 2091.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.033;ClippingRankSum=0.000;DP=202;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.41;ReadPosRankSum=-1.725;SOR=0.676 GT:AD:DP:GQ:PL 0/1:115,86:201:99:2120,0,3227 chr1 178546000 . A T 884.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.630;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=0.870;SOR=0.779 GT:AD:DP:GQ:PL 0/1:41,32:73:99:913,0,1172 chr1 178546052 . A G 672.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.255;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.85;ReadPosRankSum=0.717;SOR=0.809 GT:AD:DP:GQ:PL 0/1:35,27:62:99:701,0,967 chr1 178546177 . G A 213.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.903;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.57;ReadPosRankSum=-0.202;SOR=0.836 GT:AD:DP:GQ:PL 0/1:8,9:17:99:242,0,249 chr1 178554808 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.27;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 178554812 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.72;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 178554862 . T G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.83;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 178555015 . C G 322.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.28;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:30:351,30,0 chr1 178555419 . A G 678.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.51;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,23:23:69:707,69,0 chr1 178555461 . T C 375.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.042;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=3.473;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.92;ReadPosRankSum=0.033;SOR=1.265 GT:AD:DP:GQ:PL 0/1:13,14:27:99:404,0,280 chr1 178577512 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 178577516 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 178613606 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 178677613 . A T 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.202;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.81;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:19,8:27:99:185,0,474 chr1 178677617 . A C 868.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.03;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,28:28:83:897,83,0 chr1 178677680 . C T 169.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.150;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.49;ReadPosRankSum=-1.209;SOR=0.569 GT:AD:DP:GQ:PL 0/1:13,7:20:99:198,0,415 chr1 178747028 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 178811515 . A G 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.022;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr1 178821448 . T C 318.03 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=31.80;ReadPosRankSum=-0.524;SOR=3.258 GT:AD:DP:GQ:PL 0/1:1,9:10:12:346,0,12 chr1 178851024 . C A 370.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.54;ReadPosRankSum=-0.986;SOR=0.892 GT:AD:DP:GQ:PL 0/1:9,11:20:99:399,0,316 chr1 178883665 . T A 665.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.026;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.48;ReadPosRankSum=2.326;SOR=0.569 GT:AD:DP:GQ:PL 0/1:23,20:43:99:694,0,829 chr1 178885027 . C T 351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.473;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=2.062;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.13;ReadPosRankSum=-0.885;SOR=1.270 GT:AD:DP:GQ:PL 0/1:17,12:29:99:380,0,555 chr1 178885829 . A G 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=-0.303;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr1 178889576 . C A 579.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.469;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.357;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.60;ReadPosRankSum=0.895;SOR=0.446 GT:AD:DP:GQ:PL 0/1:28,22:50:99:608,0,872 chr1 178889624 . G A 1079.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.521;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.868;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.67;ReadPosRankSum=-0.148;SOR=0.583 GT:AD:DP:GQ:PL 0/1:37,42:79:99:1108,0,1063 chr1 178892143 . G T 232.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.710;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.62;ReadPosRankSum=0.202;SOR=0.489 GT:AD:DP:GQ:PL 0/1:18,9:27:99:261,0,636 chr1 178902082 . G A 1269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.449;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.51;ReadPosRankSum=0.568;SOR=0.650 GT:AD:DP:GQ:PL 0/1:43,51:94:99:1298,0,1173 chr1 178906919 . A G 1047.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.811;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.37;ReadPosRankSum=1.645;SOR=0.693 GT:AD:DP:GQ:PL 0/1:26,38:64:99:1076,0,720 chr1 178931355 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 178934192 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 178999183 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 179025629 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 179044256 . A G 1307.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.596;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.83;ReadPosRankSum=1.217;SOR=0.697 GT:AD:DP:GQ:PL 0/1:79,54:133:99:1336,0,2068 chr1 179064649 . T C 1488.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.23;SOR=5.031 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1517,114,0 chr1 179067983 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 179082165 . T C 1220.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.67;SOR=2.899 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1249,102,0 chr1 179097936 . C A 421.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.81;ReadPosRankSum=0.000;SOR=1.739 GT:AD:DP:GQ:PL 0/1:5,12:17:99:450,0,158 chr1 179109403 . C T 2422.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.846;ClippingRankSum=0.000;DP=181;ExcessHet=3.0103;FS=1.935;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.39;ReadPosRankSum=-1.130;SOR=0.525 GT:AD:DP:GQ:PL 0/1:96,85:181:99:2451,0,2483 chr1 179110055 . T C 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.19;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 179118799 . T C 1306.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.711;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.13;ReadPosRankSum=-0.532;SOR=0.804 GT:AD:DP:GQ:PL 0/1:35,46:81:99:1335,0,909 chr1 179120078 . C T 849.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.493;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=2.581;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.40;ReadPosRankSum=2.278;SOR=0.345 GT:AD:DP:GQ:PL 0/1:29,30:59:99:878,0,898 chr1 179120340 . C G 525.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.150;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.95;ReadPosRankSum=1.130;SOR=0.380 GT:AD:DP:GQ:PL 0/1:26,18:44:99:554,0,876 chr1 179120356 . A C 475.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.187;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=6.953;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=0.017;SOR=0.061 GT:AD:DP:GQ:PL 0/1:19,16:35:99:504,0,664 chr1 179120383 . C G 183.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.402;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=7.375;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.21;ReadPosRankSum=0.356;SOR=0.044 GT:AD:DP:GQ:PL 0/1:10,8:18:99:212,0,364 chr1 179120446 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 179126413 . C T 3581.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.408;ClippingRankSum=0.000;DP=235;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.31;ReadPosRankSum=-1.647;SOR=0.670 GT:AD:DP:GQ:PL 0/1:106,128:234:99:3610,0,2822 chr1 179131156 . T C 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-1.282;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 179131667 . T C 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr1 179134943 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 179135867 . A G 39.89 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.150;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.51;MQRankSum=-1.150;QD=9.97;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 1/1:1,3:4:2:66,2,0 chr1 179143300 . G A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,72 chr1 179184562 . G A 89.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.854;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.22;ReadPosRankSum=0.703;SOR=0.582 GT:AD:DP:GQ:PL 0/1:3,5:8:38:118,0,38 chr1 179201508 . A G 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.491;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.93;ReadPosRankSum=0.374;SOR=0.653 GT:AD:DP:GQ:PL 0/1:22,11:33:99:224,0,581 chr1 179221756 . T C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 179232470 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 179285110 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 179296377 . A G 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr1 179323307 . G A 976.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.52;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1005,96,0 chr1 179335757 . T C 783.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.02;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,22:22:66:812,66,0 chr1 179339668 . G A 602.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.568;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=8.748;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.22;ReadPosRankSum=0.557;SOR=0.056 GT:AD:DP:GQ:PL 0/1:14,21:35:99:631,0,480 chr1 179341127 . C T 2039.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.398;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=0.595;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.91;ReadPosRankSum=0.328;SOR=0.782 GT:AD:DP:GQ:PL 0/1:77,81:158:99:2068,0,1902 chr1 179342359 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 179342967 . T C 1741.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.942;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=3.794;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.53;ReadPosRankSum=1.444;SOR=0.459 GT:AD:DP:GQ:PL 0/1:79,72:151:99:1770,0,2199 chr1 179343100 . G A 1368.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.197;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=1.054;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.33;ReadPosRankSum=1.063;SOR=0.513 GT:AD:DP:GQ:PL 0/1:30,49:79:99:1397,0,1029 chr1 179343390 . G A 48.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.81;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:76,6,0 chr1 179343424 . A G 122.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.619;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.35;ReadPosRankSum=-0.414;SOR=1.329 GT:AD:DP:GQ:PL 0/1:3,5:8:89:151,0,89 chr1 179343617 . C T 955.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.142;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.58;ReadPosRankSum=-0.016;SOR=0.693 GT:AD:DP:GQ:PL 0/1:38,38:76:99:984,0,892 chr1 179350406 . C G 1179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.005;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=1.580;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.45;ReadPosRankSum=1.470;SOR=0.750 GT:AD:DP:GQ:PL 0/1:52,51:103:99:1208,0,1337 chr1 179350445 . T C 2551.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.38;SOR=1.423 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2580,251,0 chr1 179351530 . A G 769.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.277;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.281;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.52;ReadPosRankSum=-0.378;SOR=0.968 GT:AD:DP:GQ:PL 0/1:26,27:53:99:798,0,778 chr1 179351623 . T C 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.135;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr1 179357452 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 179366231 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 179366817 . C A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.26;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 179366825 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.26;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 179369916 . C G 966.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.546;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=2.151;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.37;ReadPosRankSum=0.187;SOR=1.068 GT:AD:DP:GQ:PL 0/1:51,34:85:99:995,0,1453 chr1 179370094 . A C 1438.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.665;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=1.865;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.97;ReadPosRankSum=0.187;SOR=0.990 GT:AD:DP:GQ:PL 0/1:54,49:103:99:1467,0,1590 chr1 179370199 . G A 359.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.777;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.13;ReadPosRankSum=-0.136;SOR=1.292 GT:AD:DP:GQ:PL 0/1:8,13:21:99:388,0,239 chr1 179372864 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 179378546 . C T 666.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.839;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.52;ReadPosRankSum=-0.761;SOR=0.927 GT:AD:DP:GQ:PL 0/1:16,20:36:99:695,0,560 chr1 179378697 . T C 3154.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.225;ClippingRankSum=0.000;DP=223;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.41;ReadPosRankSum=-0.633;SOR=0.708 GT:AD:DP:GQ:PL 0/1:101,118:219:99:3183,0,2600 chr1 179378929 . G A 212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.615;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.37;ReadPosRankSum=-0.088;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,7:13:99:241,0,205 chr1 179382471 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 179385169 . A G 1146.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.75;SOR=5.353 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1175,87,0 chr1 179394008 . G T 1057.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.308;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.845;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.06;ReadPosRankSum=1.124;SOR=0.539 GT:AD:DP:GQ:PL 0/1:38,43:81:99:1086,0,953 chr1 179394176 . G T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 179394819 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 179395256 . A G 2075.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.03;SOR=2.419 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2104,183,0 chr1 179411505 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 179429401 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.03;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 179429428 . C G 427.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.40;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:456,33,0 chr1 179429595 . T C 1001.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.393;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=4.468;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.36;ReadPosRankSum=1.762;SOR=0.804 GT:AD:DP:GQ:PL 0/1:34,41:75:99:1030,0,911 chr1 179430769 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 179432761 . G A 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 179432834 . C T 160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.86;ReadPosRankSum=0.319;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,6:9:98:189,0,98 chr1 179447743 . C T 429.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.216;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=0.995;SOR=0.693 GT:AD:DP:GQ:PL 0/1:16,16:32:99:458,0,460 chr1 179448212 . C T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 179449427 . A T 155.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.97;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:184,18,0 chr1 179450615 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 179455254 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 179468692 . G A 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.14;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 179483059 . C T 239.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:268,24,0 chr1 179483387 . G C 454.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:42:483,42,0 chr1 179484289 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 179484363 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 179491892 . T C 884.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.90;SOR=4.892 GT:AD:DP:GQ:PL 1/1:0,23:23:69:913,69,0 chr1 179492623 . A C 46.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:21:75,0,21 chr1 179492647 . G T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.189;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 179493014 . A G 1205.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.29;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1234,96,0 chr1 179525530 . C T 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 179528224 . T C 384.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.98;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:413,33,0 chr1 179534563 . G A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 179534671 . G A 1589.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.44;SOR=2.078 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1618,147,0 chr1 179534908 . C G 1674.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=2.343;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=27.39;SOR=0.902 GT:AD:DP:GQ:PL 1/1:2,40:42:36:1703,36,0 chr1 179534995 . G A 1389.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.09;SOR=1.721 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1418,126,0 chr1 179535175 . A C 93.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0 chr1 179550973 . C T 373.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.67;ReadPosRankSum=0.552;SOR=1.022 GT:AD:DP:GQ:PL 0/1:8,11:19:99:402,0,277 chr1 179551016 . C T 1320.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.96;SOR=4.863 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1349,105,0 chr1 179551119 . C G 1948.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.549;ClippingRankSum=0.000;DP=164;ExcessHet=3.0103;FS=5.053;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.88;ReadPosRankSum=0.174;SOR=1.095 GT:AD:DP:GQ:PL 0/1:93,71:164:99:1977,0,2555 chr1 179551371 . G A 2389.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.315;ClippingRankSum=0.000;DP=177;ExcessHet=3.0103;FS=12.350;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.50;ReadPosRankSum=-1.860;SOR=0.248 GT:AD:DP:GQ:PL 0/1:87,90:177:99:2418,0,2569 chr1 179551709 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 179552797 . G T 1963.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.824;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=1.509;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.97;ReadPosRankSum=0.166;SOR=0.848 GT:AD:DP:GQ:PL 0/1:57,66:123:99:1992,0,1725 chr1 179560015 . T C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.25;ReadPosRankSum=-0.566;SOR=0.223 GT:AD:DP:GQ:PL 0/1:3,4:7:99:107,0,104 chr1 179575763 . T C 1386.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.58;SOR=3.026 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1415,108,0 chr1 179575915 . C A 168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.132;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.027;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=0.161;SOR=0.307 GT:AD:DP:GQ:PL 0/1:6,8:14:99:197,0,141 chr1 179586812 . G C 286.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.184;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.24;ReadPosRankSum=-2.096;SOR=0.495 GT:AD:DP:GQ:PL 0/1:16,12:28:99:315,0,436 chr1 179587000 . C T 461.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.922;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.42;ReadPosRankSum=-0.025;SOR=0.874 GT:AD:DP:GQ:PL 0/1:32,17:49:99:490,0,905 chr1 179587171 . T C 3670.77 PASS AC=2;AF=1.00;AN=2;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.20;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3699,342,0 chr1 179587995 . T A 419.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.091;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=4.607;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.99;ReadPosRankSum=0.243;SOR=0.860 GT:AD:DP:GQ:PL 0/1:25,17:42:99:448,0,645 chr1 179592474 . A G 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=0.000;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:137,0,221 chr1 179592510 . A C 603.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.48;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:51:632,51,0 chr1 179592548 . A T 908.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.908;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=24.56;ReadPosRankSum=0.000;SOR=1.280 GT:AD:DP:GQ:PL 1/1:1,36:37:99:937,100,0 chr1 179593008 . G A 1424.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.13;SOR=1.775 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1453,129,0 chr1 179630949 . C G 1144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.370;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.13;ReadPosRankSum=1.304;SOR=0.698 GT:AD:DP:GQ:PL 0/1:34,47:81:99:1173,0,870 chr1 179635729 . C T 2545.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.64;SOR=1.108 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2574,234,0 chr1 179640454 . G T 1828.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.612;ClippingRankSum=0.000;DP=165;ExcessHet=3.0103;FS=5.609;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.08;ReadPosRankSum=0.221;SOR=1.014 GT:AD:DP:GQ:PL 0/1:94,71:165:99:1857,0,2335 chr1 179669034 . G A 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=-0.100;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,179 chr1 179725980 . T C 96.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:124,9,0 chr1 179725981 . G A 96.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:124,9,0 chr1 179735685 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 179743345 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 179760419 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 179760508 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 179882939 . T C 10475.77 PASS AC=2;AF=1.00;AN=2;DP=320;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.74;SOR=1.140 GT:AD:DP:GQ:PL 1/1:0,320:320:99:10504,961,0 chr1 179883417 . T G 824.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.40;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,22:22:66:853,66,0 chr1 179889198 . C T 1003.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.40;SOR=6.518 GT:AD:DP:GQ:PL 1/1:0,25:25:75:1032,75,0 chr1 179889309 . G A 3743.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.00;SOR=1.309 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3772,351,0 chr1 179907853 . C G 357.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.81;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:35:386,35,0 chr1 179917990 . G A 3741.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.93;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,98:98:99:3770,295,0 chr1 179969170 . G C 1423.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.66;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1452,144,0 chr1 179987487 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.47;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 180014530 . G A 1753.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1782,162,0 chr1 180020607 . G C 6523.77 PASS AC=2;AF=1.00;AN=2;DP=195;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.46;SOR=0.857 GT:AD:DP:GQ:PL 1/1:0,195:195:99:6552,585,0 chr1 180022553 . A T 774.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.10;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:803,60,0 chr1 180022941 . A G 918.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=4.892 GT:AD:DP:GQ:PL 1/1:0,23:23:69:947,69,0 chr1 180024658 . T C 980.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.31;SOR=5.058 GT:AD:DP:GQ:PL 1/1:0,25:25:75:1009,75,0 chr1 180041567 . T C 1126.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.26;SOR=3.545 GT:AD:DP:GQ:PL 1/1:0,32:32:95:1155,95,0 chr1 180053208 . T G 2448.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.39;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2477,233,0 chr1 180053625 . A T 388.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.81;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:417,30,0 chr1 180090676 . A C 2766.77 PASS AC=2;AF=1.00;AN=2;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.12;SOR=1.489 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2795,282,0 chr1 180102276 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 180110980 . T G 1952.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.01;SOR=2.419 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1981,182,0 chr1 180121608 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 180127396 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 180175953 . A G 6314.77 PASS AC=2;AF=1.00;AN=2;DP=196;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.22;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,196:196:99:6343,586,0 chr1 180182531 . A T 259.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:288,24,0 chr1 180186241 . C G 2753.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.56;SOR=2.658 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2782,190,0 chr1 180187214 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 180188756 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 180188807 . T C 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.32;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr1 180188823 . T C 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.27;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr1 180192484 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 180195001 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 180195956 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 180204349 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 180211304 . G C 1052.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.94;SOR=5.211 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1081,81,0 chr1 180211534 . A G 3983.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.87;SOR=1.125 GT:AD:DP:GQ:PL 1/1:0,125:125:99:4012,375,0 chr1 180211621 . C T 1635.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.08;SOR=2.400 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1664,144,0 chr1 180225308 . A G 75.96 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.99;ReadPosRankSum=0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:5:103,0,5 chr1 180225314 . A G 53.41 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.80;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:8:81,0,8 chr1 180225363 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 180236433 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 180245078 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 180257149 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 180257255 . A G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 180259833 . T C 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 180288557 . A C 1837.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.67;SOR=2.259 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1866,159,0 chr1 180314524 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.56;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 180347654 . C G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 180347726 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 180397348 . G C 67.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.47;ReadPosRankSum=-1.465;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:96:96,0,181 chr1 180434999 . G A 60.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.139;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.06;ReadPosRankSum=-1.076;SOR=1.179 GT:AD:DP:GQ:PL 0/1:9,3:12:89:89,0,272 chr1 180435318 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 180438442 . G A 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:109,0,109 chr1 180492062 . G A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 180501919 . C A 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.565;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.29;ReadPosRankSum=1.923;SOR=1.483 GT:AD:DP:GQ:PL 0/1:15,5:20:74:74,0,472 chr1 180525137 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 180544519 . T C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 180553660 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 180553681 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 180803278 . G A 487.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.870;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.21;ReadPosRankSum=1.005;SOR=1.230 GT:AD:DP:GQ:PL 0/1:9,14:23:99:516,0,273 chr1 180866054 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 180880358 . T C 820.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.41;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,22:22:66:849,66,0 chr1 180916294 . T C 14315.77 PASS AC=2;AF=1.00;AN=2;DP=434;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.99;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,434:434:99:14344,1303,0 chr1 180922406 . A C 31.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0 chr1 180928385 . C T 3000.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.27;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,93:93:99:3029,278,0 chr1 180929120 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 180936216 . C T 14722.77 PASS AC=2;AF=1.00;AN=2;DP=444;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.23;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,443:443:99:14751,1329,0 chr1 180936312 . G T 14947.77 PASS AC=2;AF=1.00;AN=2;DP=466;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.08;SOR=0.962 GT:AD:DP:GQ:PL 1/1:0,466:466:99:14976,1396,0 chr1 180944461 . A G 7221.77 PASS AC=2;AF=1.00;AN=2;DP=228;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.67;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,228:228:99:7250,684,0 chr1 180944738 . C T 555.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.82;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:584,42,0 chr1 180945168 . C T 805.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.57;SOR=2.925 GT:AD:DP:GQ:PL 1/1:0,24:24:72:834,72,0 chr1 180945830 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.674;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 180950119 . C T 340.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.30;ReadPosRankSum=-1.394;SOR=1.244 GT:AD:DP:GQ:PL 0/1:6,10:16:99:369,0,202 chr1 180954451 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 180964362 . C T 4314.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.74;SOR=3.202 GT:AD:DP:GQ:PL 1/1:0,121:121:99:4343,363,0 chr1 180964911 . T C 970.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.12;SOR=6.439 GT:AD:DP:GQ:PL 1/1:0,24:24:72:999,72,0 chr1 180965027 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 180965841 . C T 1312.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.17;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1341,135,0 chr1 180984717 . A G 4172.77 PASS AC=2;AF=1.00;AN=2;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.35;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,129:129:99:4201,387,0 chr1 180984953 . A G 614.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.54;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:643,48,0 chr1 180984994 . C T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.62;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 180987994 . C A 454.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.64;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:483,36,0 chr1 180993146 . A G 627.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.04;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,19:19:57:656,57,0 chr1 181022529 . C G 2181.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.928;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.30;ReadPosRankSum=-0.880;SOR=0.546 GT:AD:DP:GQ:PL 1/1:1,71:72:99:2210,205,0 chr1 181049122 . G A 3203.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.540;ClippingRankSum=0.000;DP=235;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.69;MQRankSum=-9.421;QD=13.63;ReadPosRankSum=-0.132;SOR=0.720 GT:AD:DP:GQ:PL 0/1:127,108:235:99:3232,0,4018 chr1 181062573 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 181062647 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 181062661 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 181088738 . T G 1994.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.22;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2023,198,0 chr1 181089055 . G T 705.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.837;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=1.005;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.96;ReadPosRankSum=0.414;SOR=0.551 GT:AD:DP:GQ:PL 0/1:31,28:59:99:734,0,907 chr1 181089177 . G A 1786.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.20;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1815,150,0 chr1 181089482 . C G 1404.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.63;SOR=1.284 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1433,96,0 chr1 181089507 . A G 1403.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.69;SOR=1.681 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1432,96,0 chr1 181131818 . G C 80.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0 chr1 181139467 . G A 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.44;ReadPosRankSum=-1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:70:70,0,78 chr1 181161412 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 181178383 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 181190323 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 181205559 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 181205590 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 181208519 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 181220781 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 181258244 . A G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 181260977 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 181260981 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 181262886 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 181314035 . C G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 181330222 . C G 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr1 181459128 . A G 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr1 181459162 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 181580411 . T G 1387.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=4.863 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1416,105,0 chr1 181588777 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 181635260 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 181647412 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 181715469 . A G 2261.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.27;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2290,198,0 chr1 181717080 . T C 2710.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.150;ClippingRankSum=0.000;DP=235;ExcessHet=3.0103;FS=1.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.58;ReadPosRankSum=0.234;SOR=0.556 GT:AD:DP:GQ:PL 0/1:127,107:234:99:2739,0,3368 chr1 181719732 . G A 644.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.298;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.16;ReadPosRankSum=-1.054;SOR=0.638 GT:AD:DP:GQ:PL 0/1:25,24:49:99:673,0,693 chr1 181732287 . C T 256.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.125;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=-1.750;SOR=0.307 GT:AD:DP:GQ:PL 0/1:10,10:20:99:285,0,358 chr1 181732663 . T A 1009.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.760;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=1.862;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.88;ReadPosRankSum=-0.318;SOR=0.476 GT:AD:DP:GQ:PL 0/1:46,39:85:99:1038,0,1443 chr1 181734140 . T G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.03;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 181737416 . G A 568.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.024;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.80;ReadPosRankSum=-0.350;SOR=0.693 GT:AD:DP:GQ:PL 0/1:18,18:36:99:597,0,597 chr1 181737549 . C T 2401.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.920;ClippingRankSum=0.000;DP=183;ExcessHet=3.0103;FS=0.598;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.12;ReadPosRankSum=-0.032;SOR=0.774 GT:AD:DP:GQ:PL 0/1:99,84:183:99:2430,0,2731 chr1 181739032 . A G 1876.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.210;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.77;ReadPosRankSum=0.192;SOR=0.866 GT:AD:DP:GQ:PL 0/1:46,54:100:99:1905,0,1573 chr1 181745036 . G A 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.08;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr1 181750543 . C T 1495.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.099;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=11.177;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.69;ReadPosRankSum=-0.316;SOR=0.736 GT:AD:DP:GQ:PL 0/1:66,62:128:99:1524,0,1647 chr1 181755073 . A G 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.94;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:112,0,30 chr1 181755974 . T C 1710.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.752;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.22;ReadPosRankSum=0.223;SOR=0.694 GT:AD:DP:GQ:PL 0/1:69,71:140:99:1739,0,1602 chr1 181757277 . G A 1813.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.39;SOR=1.781 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1842,167,0 chr1 181757894 . A T 2648.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.504;ClippingRankSum=0.000;DP=231;ExcessHet=3.0103;FS=5.578;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.47;ReadPosRankSum=-1.575;SOR=1.049 GT:AD:DP:GQ:PL 0/1:128,103:231:99:2677,0,3578 chr1 181758137 . G A 2676.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.151;ClippingRankSum=0.000;DP=188;ExcessHet=3.0103;FS=4.764;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.24;ReadPosRankSum=-0.709;SOR=0.416 GT:AD:DP:GQ:PL 0/1:88,100:188:99:2705,0,2587 chr1 181758525 . G C 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=0.329;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,259 chr1 181763559 . A G 1443.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.216;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.99;ReadPosRankSum=0.243;SOR=0.700 GT:AD:DP:GQ:PL 0/1:34,51:85:99:1472,0,880 chr1 181771065 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 181772165 . C T 2757.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.019;ClippingRankSum=0.000;DP=243;ExcessHet=3.0103;FS=0.478;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=0.567;SOR=0.749 GT:AD:DP:GQ:PL 0/1:130,112:242:99:2786,0,3349 chr1 181772562 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 181776444 . G A 2261.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.150;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.23;ReadPosRankSum=0.495;SOR=0.700 GT:AD:DP:GQ:PL 0/1:87,84:171:99:2290,0,2400 chr1 181781333 . G T 660.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.966;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=4.195;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.96;ReadPosRankSum=1.390;SOR=1.927 GT:AD:DP:GQ:PL 0/1:30,21:51:99:689,0,925 chr1 181781796 . T C 173.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:202,15,0 chr1 181783894 . T C 919.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.13;SOR=6.358 GT:AD:DP:GQ:PL 1/1:0,23:23:69:948,69,0 chr1 181785178 . G C 135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.849;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.05;ReadPosRankSum=-0.088;SOR=0.260 GT:AD:DP:GQ:PL 0/1:10,5:15:99:164,0,341 chr1 181785667 . C T 933.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.649;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=1.037;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.06;ReadPosRankSum=0.097;SOR=0.964 GT:AD:DP:GQ:PL 0/1:27,35:62:99:962,0,669 chr1 181790281 . C G 158.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.738;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.56;ReadPosRankSum=-0.352;SOR=0.175 GT:AD:DP:GQ:PL 0/1:15,6:21:99:187,0,549 chr1 181790337 . T A 857.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.823;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=2.309;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.59;ReadPosRankSum=-0.240;SOR=0.420 GT:AD:DP:GQ:PL 0/1:48,33:81:99:886,0,1267 chr1 181790521 . G A 1818.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.041;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=0.596;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.66;ReadPosRankSum=0.848;SOR=0.754 GT:AD:DP:GQ:PL 0/1:85,71:156:99:1847,0,2332 chr1 181799050 . T C 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=1.242;SOR=0.223 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,140 chr1 181832511 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 181832613 . C T 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr1 181832631 . T C 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr1 181832700 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 181881355 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 181920883 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 181968552 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 182057678 . G C 3227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.441;ClippingRankSum=0.000;DP=241;ExcessHet=3.0103;FS=1.623;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.39;ReadPosRankSum=-0.919;SOR=0.585 GT:AD:DP:GQ:PL 0/1:125,116:241:99:3256,0,3506 chr1 182057887 . C T 1848.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.348;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=1.389;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.11;ReadPosRankSum=-0.632;SOR=0.569 GT:AD:DP:GQ:PL 0/1:60,71:131:99:1877,0,1561 chr1 182088371 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 182133184 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 182133185 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 182207521 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 182214603 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 182219542 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 182237047 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 182297103 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 182297382 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 182300813 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 182300833 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 182323387 . A C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 182345885 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 182345921 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 182348360 . C A 56.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=14.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:84,12,0 chr1 182385715 . A G 197.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.061;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.99;ReadPosRankSum=1.645;SOR=0.804 GT:AD:DP:GQ:PL 0/1:15,7:22:99:226,0,523 chr1 182385911 . A G 744.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.493;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.41;ReadPosRankSum=-1.146;SOR=0.596 GT:AD:DP:GQ:PL 0/1:32,28:60:99:773,0,801 chr1 182387264 . A G 1273.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.102;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.00;ReadPosRankSum=1.232;SOR=0.699 GT:AD:DP:GQ:PL 0/1:50,48:98:99:1302,0,1376 chr1 182399943 . G A 3434.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.576;ClippingRankSum=0.000;DP=279;ExcessHet=3.0103;FS=0.437;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.31;ReadPosRankSum=-1.658;SOR=0.642 GT:AD:DP:GQ:PL 0/1:152,127:279:99:3463,0,4569 chr1 182400098 . A G 3944.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.216;ClippingRankSum=0.000;DP=321;ExcessHet=3.0103;FS=3.001;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.29;ReadPosRankSum=-0.891;SOR=0.859 GT:AD:DP:GQ:PL 0/1:175,146:321:99:3973,0,4902 chr1 182400603 . G A 244.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.741;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=4.075;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.64;ReadPosRankSum=1.763;SOR=0.086 GT:AD:DP:GQ:PL 0/1:14,9:23:99:273,0,515 chr1 182458220 . G A 418.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.270;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.45;ReadPosRankSum=-0.361;SOR=0.859 GT:AD:DP:GQ:PL 0/1:11,13:24:99:447,0,387 chr1 182458524 . C T 60.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.887;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.60;ReadPosRankSum=-0.514;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:89:89,0,185 chr1 182458627 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 182460593 . T C 1212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.338;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=0.750;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.93;ReadPosRankSum=-1.956;SOR=0.829 GT:AD:DP:GQ:PL 0/1:63,48:111:99:1241,0,1617 chr1 182460860 . C A 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=1.434;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,255 chr1 182463046 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 182472311 . G A 1638.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.916;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=10.493;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.03;ReadPosRankSum=-0.290;SOR=1.831 GT:AD:DP:GQ:PL 0/1:57,52:109:99:1667,0,1610 chr1 182472700 . C A 1152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.895;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=8.408;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.37;ReadPosRankSum=-0.128;SOR=0.213 GT:AD:DP:GQ:PL 0/1:29,46:75:99:1181,0,770 chr1 182473879 . G C 2825.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.477;ClippingRankSum=0.000;DP=190;ExcessHet=3.0103;FS=4.260;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.87;ReadPosRankSum=-0.101;SOR=0.449 GT:AD:DP:GQ:PL 0/1:86,104:190:99:2854,0,2453 chr1 182474327 . T C 4528.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.82;SOR=1.138 GT:AD:DP:GQ:PL 1/1:0,138:138:99:4557,414,0 chr1 182521972 . A C 622.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.966;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.39;ReadPosRankSum=0.367;SOR=0.735 GT:AD:DP:GQ:PL 0/1:21,17:38:99:651,0,1209 chr1 182521976 . T C 660.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.074;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.94;ReadPosRankSum=-0.085;SOR=0.804 GT:AD:DP:GQ:PL 0/1:21,18:39:99:689,0,1206 chr1 182532898 . G T 689.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.029;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=1.055;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.78;ReadPosRankSum=-0.442;SOR=0.467 GT:AD:DP:GQ:PL 0/1:38,26:64:99:718,0,1050 chr1 182540134 . G A 605.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.256;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.94;ReadPosRankSum=-1.663;SOR=0.551 GT:AD:DP:GQ:PL 0/1:16,22:38:99:634,0,486 chr1 182548507 . C A 1107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.602;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.927;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=-0.722;SOR=0.823 GT:AD:DP:GQ:PL 0/1:34,37:71:99:1136,0,928 chr1 182553417 . C T 1349.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.018;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.865;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.17;ReadPosRankSum=0.952;SOR=0.859 GT:AD:DP:GQ:PL 0/1:39,50:89:99:1378,0,1089 chr1 182553817 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 182554368 . A G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:60:81,0,60 chr1 182554369 . A G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:60:81,0,60 chr1 182554456 . A C 256.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.861;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.51;ReadPosRankSum=0.579;SOR=1.179 GT:AD:DP:GQ:PL 0/1:10,9:19:99:285,0,292 chr1 182575680 . T C 323.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.862;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.99;ReadPosRankSum=0.320;SOR=0.481 GT:AD:DP:GQ:PL 0/1:15,12:27:99:352,0,494 chr1 182576401 . A G 538.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.136;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.14;ReadPosRankSum=0.212;SOR=0.756 GT:AD:DP:GQ:PL 0/1:20,21:41:99:567,0,530 chr1 182579884 . A G 5388.77 PASS AC=2;AF=1.00;AN=2;DP=180;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.94;SOR=0.785 GT:AD:DP:GQ:PL 1/1:0,180:180:99:5417,540,0 chr1 182581065 . A G 381.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.57;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:410,30,0 chr1 182581321 . G A 1116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.394;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=0.742;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.34;ReadPosRankSum=-1.256;SOR=0.558 GT:AD:DP:GQ:PL 0/1:59,49:108:99:1145,0,1522 chr1 182583331 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 182600491 . T C 3972.77 PASS AC=2;AF=1.00;AN=2;DP=127;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.53;SOR=1.143 GT:AD:DP:GQ:PL 1/1:0,126:126:99:4001,376,0 chr1 182601868 . C T 3025.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.88;SOR=1.562 GT:AD:DP:GQ:PL 1/1:0,98:98:99:3054,294,0 chr1 182602142 . C T 5836.77 PASS AC=2;AF=1.00;AN=2;DP=182;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.07;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,182:182:99:5865,545,0 chr1 182604092 . T C 1502.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.67;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1531,138,0 chr1 182808884 . G A 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.728;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=-0.105;SOR=0.836 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,228 chr1 182809232 . G A 2328.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.25;SOR=2.372 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2357,204,0 chr1 182816507 . T C 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.207;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.31;ReadPosRankSum=0.139;SOR=0.055 GT:AD:DP:GQ:PL 0/1:6,6:12:99:176,0,213 chr1 182881348 . C T 976.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.760;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.895;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.52;ReadPosRankSum=1.491;SOR=0.505 GT:AD:DP:GQ:PL 0/1:39,39:78:99:1005,0,1145 chr1 182881592 . T C 2380.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.01;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2409,210,0 chr1 182884882 . G A 1533.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.95;SOR=2.208 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1562,144,0 chr1 182904493 . C T 279.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.463;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=15.315;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.46;ReadPosRankSum=2.311;SOR=4.615 GT:AD:DP:GQ:PL 0/1:8,9:17:99:308,0,181 chr1 183023004 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr1 183023026 . T C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr1 183023890 . C T 4050.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.636;ClippingRankSum=0.000;DP=327;ExcessHet=3.0103;FS=1.329;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.46;ReadPosRankSum=-0.668;SOR=0.781 GT:AD:DP:GQ:PL 0/1:175,150:325:99:4079,0,4796 chr1 183024303 . T C 149.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.221;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.98;ReadPosRankSum=-0.520;SOR=1.911 GT:AD:DP:GQ:PL 0/1:5,5:10:99:178,0,145 chr1 183050505 . A T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 183050573 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 183103455 . T C 2324.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.761;ClippingRankSum=0.000;DP=261;ExcessHet=3.0103;FS=3.519;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.91;ReadPosRankSum=-0.356;SOR=0.909 GT:AD:DP:GQ:PL 0/1:163,98:261:99:2353,0,4282 chr1 183103679 . C T 1823.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.107;ClippingRankSum=0.000;DP=174;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.48;ReadPosRankSum=-0.782;SOR=0.694 GT:AD:DP:GQ:PL 0/1:96,78:174:99:1852,0,2667 chr1 183103773 . T C 923.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.120;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=2.133;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.87;ReadPosRankSum=1.084;SOR=1.105 GT:AD:DP:GQ:PL 0/1:52,33:85:99:952,0,1430 chr1 183108480 . C T 379.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=0.247;SOR=1.765 GT:AD:DP:GQ:PL 0/1:4,10:14:99:408,0,292 chr1 183108483 . C T 379.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=0.783;SOR=1.765 GT:AD:DP:GQ:PL 0/1:4,10:14:99:408,0,292 chr1 183110374 . C T 439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.042;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.77;ReadPosRankSum=-1.583;SOR=0.631 GT:AD:DP:GQ:PL 0/1:28,17:45:99:468,0,864 chr1 183110718 . T C 612.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.813;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=8.744;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.51;ReadPosRankSum=-0.625;SOR=0.045 GT:AD:DP:GQ:PL 0/1:13,22:35:99:641,0,438 chr1 183115472 . A G 1788.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.583;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.03;ReadPosRankSum=0.529;SOR=0.700 GT:AD:DP:GQ:PL 0/1:49,45:94:99:1817,0,2663 chr1 183115473 . C A 1788.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.999;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.897;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.25;ReadPosRankSum=0.177;SOR=0.548 GT:AD:DP:GQ:PL 0/1:50,48:98:99:1817,0,2663 chr1 183116433 . C T 408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.404;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=3.171;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.03;ReadPosRankSum=-0.319;SOR=0.105 GT:AD:DP:GQ:PL 0/1:11,13:24:99:437,0,370 chr1 183116561 . 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G A 305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.84;ReadPosRankSum=-1.346;SOR=0.760 GT:AD:DP:GQ:PL 0/1:5,9:14:99:334,0,167 chr1 183117622 . A C 3919.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.353;ClippingRankSum=0.000;DP=291;ExcessHet=3.0103;FS=0.427;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=2.752;SOR=0.739 GT:AD:DP:GQ:PL 0/1:147,144:291:99:3948,0,3981 chr1 183121616 . A G 1008.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.473;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.40;ReadPosRankSum=0.862;SOR=0.781 GT:AD:DP:GQ:PL 0/1:21,31:52:99:1037,0,612 chr1 183124740 . T C 3475.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.921;ClippingRankSum=0.000;DP=282;ExcessHet=3.0103;FS=8.201;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.33;ReadPosRankSum=-0.763;SOR=0.790 GT:AD:DP:GQ:PL 0/1:153,129:282:99:3504,0,4011 chr1 183125412 . T C 4911.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.616;ClippingRankSum=0.000;DP=351;ExcessHet=3.0103;FS=2.943;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=-1.454;SOR=0.546 GT:AD:DP:GQ:PL 0/1:167,184:351:99:4940,0,4478 chr1 183125667 . G A 829.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.653;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=10.140;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.17;ReadPosRankSum=-1.303;SOR=2.359 GT:AD:DP:GQ:PL 0/1:36,27:63:99:858,0,1164 chr1 183126099 . A G 1973.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.077;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=1.814;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.51;ReadPosRankSum=0.300;SOR=1.007 GT:AD:DP:GQ:PL 0/1:68,68:136:99:2002,0,2144 chr1 183126342 . G A 2504.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.356;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=1.450;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.37;ReadPosRankSum=-0.082;SOR=0.885 GT:AD:DP:GQ:PL 0/1:68,85:153:99:2533,0,1903 chr1 183126461 . T C 439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.686;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.94;ReadPosRankSum=-0.873;SOR=1.230 GT:AD:DP:GQ:PL 0/1:8,13:21:99:468,0,271 chr1 183127499 . G A 345.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.454;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.15;ReadPosRankSum=0.859;SOR=0.336 GT:AD:DP:GQ:PL 0/1:19,12:31:99:374,0,666 chr1 183127533 . C T 297.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.304;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.67;ReadPosRankSum=1.842;SOR=0.223 GT:AD:DP:GQ:PL 0/1:9,10:19:99:326,0,319 chr1 183127559 . T C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 183128474 . A T 63.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.94;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:73:92,0,73 chr1 183128866 . A G 529.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.828;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=3.659;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.61;ReadPosRankSum=0.446;SOR=1.679 GT:AD:DP:GQ:PL 0/1:24,18:42:99:558,0,672 chr1 183130245 . T C 318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.497;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.56;ReadPosRankSum=-0.895;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,10:12:47:347,0,47 chr1 183130566 . G A 529.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.890;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=1.331;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.04;ReadPosRankSum=0.880;SOR=0.368 GT:AD:DP:GQ:PL 0/1:22,22:44:99:558,0,616 chr1 183130686 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 183131420 . T C 370.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.283;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.24;ReadPosRankSum=-2.546;SOR=1.002 GT:AD:DP:GQ:PL 0/1:17,11:28:99:399,0,3178 chr1 183131461 . A G 106.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.196;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.63;ReadPosRankSum=-1.247;SOR=0.425 GT:AD:DP:GQ:PL 0/1:11,3:14:99:135,0,2902 chr1 183131463 . T G 64.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.196;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.63;ReadPosRankSum=-1.091;SOR=0.425 GT:AD:DP:GQ:PL 0/1:11,3:14:93:93,0,2905 chr1 183132309 . A C 445.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.304;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.46;ReadPosRankSum=-0.572;SOR=0.223 GT:AD:DP:GQ:PL 0/1:9,10:19:99:474,0,1486 chr1 183132316 . T G 639.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.937;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=3.150;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.85;ReadPosRankSum=-0.599;SOR=0.105 GT:AD:DP:GQ:PL 0/1:13,15:28:99:668,0,1711 chr1 183132336 . G A 960.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.470;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=4.334;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.02;ReadPosRankSum=-0.354;SOR=0.190 GT:AD:DP:GQ:PL 0/1:21,27:48:99:989,0,1973 chr1 183132551 . G A 1570.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.342;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.66;ReadPosRankSum=0.308;SOR=0.662 GT:AD:DP:GQ:PL 0/1:55,60:115:99:1599,0,1469 chr1 183134878 . G A 1247.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.201;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=1.821;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.34;ReadPosRankSum=-1.354;SOR=0.911 GT:AD:DP:GQ:PL 0/1:42,45:87:99:1276,0,1157 chr1 183136189 . C T 104.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.599;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=4.472;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.48;ReadPosRankSum=0.132;SOR=0.061 GT:AD:DP:GQ:PL 0/1:9,5:14:99:133,0,334 chr1 183136264 . C G 479.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.093;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=3.248;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.21;ReadPosRankSum=1.084;SOR=0.273 GT:AD:DP:GQ:PL 0/1:29,18:47:99:508,0,900 chr1 183136399 . T C 1071.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.391;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.93;ReadPosRankSum=-0.928;SOR=0.646 GT:AD:DP:GQ:PL 0/1:76,44:120:99:1100,0,2131 chr1 183136570 . G A 638.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.163;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.65;ReadPosRankSum=-0.163;SOR=0.659 GT:AD:DP:GQ:PL 0/1:35,25:60:99:667,0,1031 chr1 183137604 . G A 547.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.937;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.74;ReadPosRankSum=-0.572;SOR=0.679 GT:AD:DP:GQ:PL 0/1:25,18:43:99:576,0,801 chr1 183142906 . G C 384.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.945;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.38;ReadPosRankSum=-0.257;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,12:18:99:413,0,196 chr1 183186347 . C A 1333.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.547;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=0.787;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.91;ReadPosRankSum=-1.615;SOR=0.602 GT:AD:DP:GQ:PL 0/1:58,54:112:99:1362,0,1632 chr1 183186565 . C A 2637.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.450;ClippingRankSum=0.000;DP=194;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.60;ReadPosRankSum=-0.590;SOR=0.694 GT:AD:DP:GQ:PL 0/1:93,101:194:99:2666,0,2352 chr1 183186582 . C A 3476.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.807;ClippingRankSum=0.000;DP=177;ExcessHet=3.0103;FS=2.018;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.64;ReadPosRankSum=-0.220;SOR=0.547 GT:AD:DP:GQ:PL 0/1:87,90:177:99:3505,0,3583 chr1 183186643 . A C 1201.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.298;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=3.616;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.24;ReadPosRankSum=-0.569;SOR=0.235 GT:AD:DP:GQ:PL 0/1:35,39:74:99:1230,0,1201 chr1 183193851 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 183193943 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 183208083 . A G 958.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.658;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=7.111;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.25;ReadPosRankSum=-0.803;SOR=2.501 GT:AD:DP:GQ:PL 0/1:30,29:59:99:987,0,944 chr1 183243277 . G A 3727.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.293;ClippingRankSum=0.000;DP=311;ExcessHet=3.0103;FS=3.691;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.99;ReadPosRankSum=-1.825;SOR=0.709 GT:AD:DP:GQ:PL 0/1:164,147:311:99:3756,0,4297 chr1 183260737 . T G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.46;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 183267856 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 183285000 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.842;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 183290468 . T G 284.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.931;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.56;ReadPosRankSum=0.551;SOR=2.133 GT:AD:DP:GQ:PL 0/1:12,9:21:99:313,0,368 chr1 183292575 . A G 882.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.70;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,27:27:81:911,81,0 chr1 183297047 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 183297143 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 183303351 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 183304616 . C T 1289.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.074;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=6.737;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.75;ReadPosRankSum=-0.762;SOR=1.512 GT:AD:DP:GQ:PL 0/1:33,44:77:99:1318,0,738 chr1 183313061 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 183321512 . A G 149.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.97;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:178,18,0 chr1 183370850 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 183412231 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 183417693 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 183422389 . T A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 183471970 . A C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 183502160 . G T 99.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.67;ReadPosRankSum=0.075;SOR=0.223 GT:AD:DP:GQ:PL 0/1:9,4:13:99:128,0,333 chr1 183517724 . G A 1165.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.051;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=3.144;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=0.770;SOR=0.394 GT:AD:DP:GQ:PL 0/1:37,41:78:99:1194,0,963 chr1 183546965 . G C 319.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.497;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.65;ReadPosRankSum=0.720;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,10:12:43:348,0,43 chr1 183547305 . G A 535.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.633;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=13.341;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.74;ReadPosRankSum=-2.129;SOR=2.431 GT:AD:DP:GQ:PL 0/1:35,20:55:99:564,0,922 chr1 183547367 . T C 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.902;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=5.477;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.51;ReadPosRankSum=-0.223;SOR=2.303 GT:AD:DP:GQ:PL 0/1:22,5:27:99:123,0,662 chr1 183552148 . C T 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.94;ReadPosRankSum=-1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:112,0,30 chr1 183556317 . T G 1107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.433;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=2.637;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.08;ReadPosRankSum=1.027;SOR=0.435 GT:AD:DP:GQ:PL 0/1:51,49:100:99:1136,0,1224 chr1 183565800 . C T 1899.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.042;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=10.207;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.61;ReadPosRankSum=-0.085;SOR=0.937 GT:AD:DP:GQ:PL 0/1:105,74:179:99:1928,0,2824 chr1 183569590 . T A 42.15 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=14.05;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:78,9,0 chr1 183573252 . T C 2029.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.445;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.73;ReadPosRankSum=1.270;SOR=0.678 GT:AD:DP:GQ:PL 0/1:51,78:129:99:2058,0,1310 chr1 183573612 . G T 188.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.16;ReadPosRankSum=-0.366;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:217,0,175 chr1 183586644 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.69;ReadPosRankSum=1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:75,0,71 chr1 183587485 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 183623281 . G T 1682.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.822;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=2.135;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.66;ReadPosRankSum=0.665;SOR=0.441 GT:AD:DP:GQ:PL 0/1:44,57:101:99:1711,0,1317 chr1 183623435 . C T 2948.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.050;ClippingRankSum=0.000;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.46;ReadPosRankSum=-1.027;SOR=0.660 GT:AD:DP:GQ:PL 0/1:107,112:219:99:2977,0,2748 chr1 183635770 . A G 2478.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.121;ClippingRankSum=0.000;DP=148;ExcessHet=3.0103;FS=5.741;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.75;ReadPosRankSum=-0.199;SOR=0.309 GT:AD:DP:GQ:PL 0/1:66,82:148:99:2507,0,2036 chr1 183647791 . T C 1284.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.357;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=7.486;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.01;ReadPosRankSum=1.807;SOR=1.345 GT:AD:DP:GQ:PL 0/1:58,49:107:99:1313,0,1488 chr1 183647970 . A G 2723.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.416;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=2.565;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.80;ReadPosRankSum=-0.909;SOR=0.740 GT:AD:DP:GQ:PL 0/1:84,100:184:99:2752,0,2182 chr1 183702950 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 183705162 . T C 212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.615;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.37;ReadPosRankSum=0.664;SOR=0.223 GT:AD:DP:GQ:PL 0/1:6,7:13:99:241,0,211 chr1 183742348 . C T 816.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.328;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.859;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.28;ReadPosRankSum=0.861;SOR=0.551 GT:AD:DP:GQ:PL 0/1:52,36:88:99:845,0,1566 chr1 183750909 . T C 32.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.55;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:35:61,0,35 chr1 183797056 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 183806504 . A T 2358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.731;ClippingRankSum=0.000;DP=193;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.22;ReadPosRankSum=0.466;SOR=0.685 GT:AD:DP:GQ:PL 0/1:98,95:193:99:2387,0,2359 chr1 183883780 . G C 1633.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.655;ClippingRankSum=0.000;DP=148;ExcessHet=3.0103;FS=3.991;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.04;ReadPosRankSum=0.295;SOR=0.417 GT:AD:DP:GQ:PL 0/1:79,69:148:99:1662,0,2164 chr1 183888260 . A G 284.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.122;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.73;ReadPosRankSum=2.276;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,10:12:35:313,0,35 chr1 183897951 . C T 806.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.67;ReadPosRankSum=1.133;SOR=0.593 GT:AD:DP:GQ:PL 0/1:29,30:59:99:835,0,813 chr1 183902503 . G A 682.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.071;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.01;ReadPosRankSum=1.173;SOR=0.693 GT:AD:DP:GQ:PL 0/1:34,28:62:99:711,0,815 chr1 183904764 . A G 390.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.597;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.03;ReadPosRankSum=1.814;SOR=0.195 GT:AD:DP:GQ:PL 0/1:13,13:26:99:419,0,439 chr1 183907153 . T C 2397.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.479;ClippingRankSum=0.000;DP=183;ExcessHet=3.0103;FS=4.543;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=-1.260;SOR=0.427 GT:AD:DP:GQ:PL 0/1:91,92:183:99:2426,0,2570 chr1 183907355 . C A 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.000;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 183911955 . A T 1038.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.616;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=1.221;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.04;ReadPosRankSum=2.677;SOR=1.022 GT:AD:DP:GQ:PL 0/1:38,36:74:99:1067,0,1095 chr1 183922025 . C G 877.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.694;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.13;ReadPosRankSum=-0.617;SOR=1.038 GT:AD:DP:GQ:PL 0/1:31,27:58:99:906,0,1034 chr1 183926044 . G A 769.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.826;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.04;ReadPosRankSum=-0.501;SOR=0.596 GT:AD:DP:GQ:PL 0/1:23,25:48:99:798,0,680 chr1 183940396 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.674;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 183965546 . T C 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr1 183969170 . C A 1167.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.30;SOR=6.358 GT:AD:DP:GQ:PL 1/1:0,23:23:84:1196,84,0 chr1 183973816 . C T 362.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.206;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.96;ReadPosRankSum=-0.545;SOR=0.551 GT:AD:DP:GQ:PL 0/1:15,13:28:99:391,0,474 chr1 183974955 . A C 131.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.78;ReadPosRankSum=-1.938;SOR=0.260 GT:AD:DP:GQ:PL 0/1:10,5:15:99:160,0,373 chr1 183975310 . C T 319.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.843;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.83;ReadPosRankSum=2.897;SOR=0.793 GT:AD:DP:GQ:PL 0/1:9,10:19:99:348,0,312 chr1 184036994 . A G 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=-1.431;SOR=1.329 GT:AD:DP:GQ:PL 0/1:6,4:10:99:137,0,186 chr1 184037415 . C G 423.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.244;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.66;ReadPosRankSum=-1.057;SOR=0.910 GT:AD:DP:GQ:PL 0/1:9,15:24:99:452,0,236 chr1 184051811 . G A 291.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.929;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.721;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.67;ReadPosRankSum=-0.907;SOR=1.329 GT:AD:DP:GQ:PL 0/1:13,12:25:99:320,0,396 chr1 184054395 . A C 1312.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.174;ClippingRankSum=0.000;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.18;ReadPosRankSum=0.084;SOR=0.727 GT:AD:DP:GQ:PL 0/1:86,57:143:99:1341,0,2216 chr1 184069009 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 184069017 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 184254574 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 184256601 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 184256676 . A G 111.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:140,15,0 chr1 184265926 . T G 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.59;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:66,0,33 chr1 184353195 . C T 31.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0 chr1 184439624 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 184507487 . T C 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.81;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 184566479 . A G 143.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.07;ReadPosRankSum=0.275;SOR=2.636 GT:AD:DP:GQ:PL 0/1:6,5:11:99:172,0,149 chr1 184567037 . T C 469.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.36;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:48:498,48,0 chr1 184573918 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 184598329 . G T 238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.805;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-1.256;SOR=0.807 GT:AD:DP:GQ:PL 0/1:16,9:25:99:267,0,491 chr1 184655014 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 184693047 . C T 1648.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.715;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=10.160;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.74;ReadPosRankSum=0.726;SOR=0.206 GT:AD:DP:GQ:PL 0/1:54,66:120:99:1677,0,1532 chr1 184694447 . T C 1041.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.829;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=6.254;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.66;ReadPosRankSum=0.261;SOR=0.200 GT:AD:DP:GQ:PL 0/1:22,37:59:99:1070,0,635 chr1 184702775 . C A 510.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.540;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=2.235;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.61;ReadPosRankSum=1.509;SOR=1.385 GT:AD:DP:GQ:PL 0/1:14,15:29:99:539,0,463 chr1 184708330 . G A 1154.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.643;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.12;ReadPosRankSum=0.202;SOR=0.807 GT:AD:DP:GQ:PL 0/1:46,42:88:99:1183,0,1372 chr1 184711947 . A G 499.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.62;ReadPosRankSum=1.118;SOR=0.582 GT:AD:DP:GQ:PL 0/1:17,15:32:99:528,0,606 chr1 184719103 . C T 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=-0.054;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:218,0,176 chr1 184726437 . C T 468.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.816;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=5.013;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.67;ReadPosRankSum=-0.667;SOR=0.132 GT:AD:DP:GQ:PL 0/1:20,17:37:99:497,0,690 chr1 184737172 . G A 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.385;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=1.383;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,250 chr1 184749467 . G A 786.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.102;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.88;ReadPosRankSum=-1.394;SOR=0.561 GT:AD:DP:GQ:PL 0/1:14,30:44:99:815,0,302 chr1 184807945 . G A 1161.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.484;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=3.021;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.71;ReadPosRankSum=0.471;SOR=1.390 GT:AD:DP:GQ:PL 0/1:44,35:79:99:1190,0,1396 chr1 184807967 . G A 1382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.309;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.30;ReadPosRankSum=0.935;SOR=0.825 GT:AD:DP:GQ:PL 0/1:60,44:104:99:1411,0,1926 chr1 184808333 . A T 816.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.730;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=15.227;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.84;ReadPosRankSum=-0.680;SOR=0.088 GT:AD:DP:GQ:PL 0/1:35,34:69:99:845,0,1148 chr1 184810781 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 184810968 . C T 442.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.346;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=3.617;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.81;ReadPosRankSum=0.586;SOR=0.430 GT:AD:DP:GQ:PL 0/1:9,19:28:99:471,0,228 chr1 184810997 . G C 129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.179;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=2.112;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.21;ReadPosRankSum=-3.025;SOR=1.329 GT:AD:DP:GQ:PL 0/1:12,6:18:99:158,0,381 chr1 184831931 . T C 1924.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.07;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1953,191,0 chr1 184899118 . G A 491.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.796;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=2.906;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.99;ReadPosRankSum=1.267;SOR=1.708 GT:AD:DP:GQ:PL 0/1:25,16:41:99:520,0,841 chr1 184957182 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 184961364 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 185091886 . G A 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=-1.483;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,137 chr1 185125145 . G T 352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.381;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=2.120;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.57;ReadPosRankSum=0.061;SOR=1.352 GT:AD:DP:GQ:PL 0/1:15,11:26:99:381,0,444 chr1 185145705 . G A 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=0.000;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr1 185150662 . C T 453.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.41;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,14:14:42:482,42,0 chr1 185150717 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 185166613 . A G 483.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.317;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=1.053;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.64;ReadPosRankSum=-1.810;SOR=0.787 GT:AD:DP:GQ:PL 0/1:34,22:56:99:512,0,860 chr1 185168329 . A T 652.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.529;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=1.218;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.54;ReadPosRankSum=-1.056;SOR=0.430 GT:AD:DP:GQ:PL 0/1:24,18:42:99:681,0,4660 chr1 185168496 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=1.036;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 185174589 . A G 853.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.521;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=1.911;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.38;ReadPosRankSum=-0.409;SOR=1.002 GT:AD:DP:GQ:PL 0/1:40,35:75:99:882,0,964 chr1 185175215 . T G 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=0.000;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,146 chr1 185180131 . T C 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-2.189;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 185201342 . C T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 185202737 . A G 724.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.620;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=1.007;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.50;ReadPosRankSum=-0.071;SOR=0.718 GT:AD:DP:GQ:PL 0/1:28,30:58:99:753,0,859 chr1 185206883 . A G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-1.645;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 185231929 . T C 836.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.879;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=4.351;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.50;ReadPosRankSum=-0.334;SOR=0.268 GT:AD:DP:GQ:PL 0/1:30,32:62:99:865,0,912 chr1 185271342 . A G 729.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.910;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=3.131;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.00;ReadPosRankSum=-0.138;SOR=0.407 GT:AD:DP:GQ:PL 0/1:39,34:73:99:758,0,967 chr1 185290599 . A G 717.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.728;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=7.194;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=-1.359;SOR=2.468 GT:AD:DP:GQ:PL 0/1:25,23:48:99:746,0,729 chr1 185297982 . A G 218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=0.349;SOR=0.141 GT:AD:DP:GQ:PL 0/1:8,7:15:99:247,0,289 chr1 185300784 . T C 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=1.368;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 185488785 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 185606141 . G T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.80;ReadPosRankSum=0.967;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:31:81,0,31 chr1 185864433 . A C 451.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.209;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.10;ReadPosRankSum=0.600;SOR=0.859 GT:AD:DP:GQ:PL 0/1:3,15:18:71:480,0,71 chr1 186015385 . T C 1930.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.759;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=2.994;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.79;ReadPosRankSum=-0.197;SOR=1.003 GT:AD:DP:GQ:PL 0/1:82,69:151:99:1959,0,2207 chr1 186016799 . C G 135.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:163,12,0 chr1 186052900 . T G 288.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.057;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.04;ReadPosRankSum=1.342;SOR=0.446 GT:AD:DP:GQ:PL 0/1:8,10:18:99:317,0,246 chr1 186057342 . T C 1596.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.739;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=4.669;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=0.429;SOR=0.389 GT:AD:DP:GQ:PL 0/1:47,64:111:99:1625,0,1041 chr1 186061770 . G T 771.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.600;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.44;ReadPosRankSum=-0.288;SOR=0.793 GT:AD:DP:GQ:PL 0/1:24,26:50:99:800,0,684 chr1 186061909 . C T 846.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.478;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=0.827;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.08;ReadPosRankSum=-1.552;SOR=0.837 GT:AD:DP:GQ:PL 0/1:46,38:84:99:875,0,1319 chr1 186069335 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 186069874 . C T 143.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.543;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.58;ReadPosRankSum=1.254;SOR=0.818 GT:AD:DP:GQ:PL 0/1:9,6:15:99:172,0,243 chr1 186070930 . G C 377.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.213;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=29.06;ReadPosRankSum=0.595;SOR=2.833 GT:AD:DP:GQ:PL 0/1:2,11:13:44:406,0,44 chr1 186081285 . A G 1443.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.052;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.75;ReadPosRankSum=-0.576;SOR=0.648 GT:AD:DP:GQ:PL 0/1:48,57:105:99:1472,0,1111 chr1 186086239 . A G 775.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.249;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=4.801;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.86;ReadPosRankSum=-0.214;SOR=1.556 GT:AD:DP:GQ:PL 0/1:19,27:46:99:804,0,520 chr1 186088049 . T C 915.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.529;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.95;ReadPosRankSum=2.006;SOR=0.708 GT:AD:DP:GQ:PL 0/1:53,39:92:99:944,0,1528 chr1 186095628 . A T 338.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.678;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.13;ReadPosRankSum=0.202;SOR=0.223 GT:AD:DP:GQ:PL 0/1:10,11:21:99:367,0,605 chr1 186095649 . A T 241.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.60;ReadPosRankSum=-2.000;SOR=0.569 GT:AD:DP:GQ:PL 0/1:7,6:13:99:270,0,501 chr1 186108331 . A G 323.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.048;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=-0.332;SOR=0.495 GT:AD:DP:GQ:PL 0/1:14,11:25:99:352,0,510 chr1 186112786 . C T 1436.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.503;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.18;ReadPosRankSum=-1.418;SOR=0.643 GT:AD:DP:GQ:PL 0/1:60,58:118:99:1465,0,1765 chr1 186117446 . G A 1543.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.383;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.15;ReadPosRankSum=-0.203;SOR=0.767 GT:AD:DP:GQ:PL 0/1:39,51:90:99:1572,0,1120 chr1 186119940 . G A 1133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.642;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.93;ReadPosRankSum=-0.421;SOR=0.731 GT:AD:DP:GQ:PL 0/1:53,42:95:99:1162,0,1467 chr1 186119980 . T C 1067.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.997;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=0.717;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.90;ReadPosRankSum=0.807;SOR=0.602 GT:AD:DP:GQ:PL 0/1:68,52:120:99:1105,0,2060 chr1 186120231 . C A 446.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.346;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.96;ReadPosRankSum=-0.751;SOR=0.846 GT:AD:DP:GQ:PL 0/1:13,15:28:99:475,0,425 chr1 186122944 . A C 1548.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.433;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=3.591;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.56;ReadPosRankSum=1.009;SOR=0.399 GT:AD:DP:GQ:PL 0/1:74,60:134:99:1577,0,2195 chr1 186123408 . A G 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.25;ReadPosRankSum=-0.699;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:174,0,218 chr1 186132407 . A G 281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.072;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.62;ReadPosRankSum=1.464;SOR=0.610 GT:AD:DP:GQ:PL 0/1:25,12:37:99:310,0,691 chr1 186137729 . C T 1511.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.390;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=1.473;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.37;ReadPosRankSum=-1.695;SOR=0.871 GT:AD:DP:GQ:PL 0/1:76,57:133:99:1540,0,2148 chr1 186144216 . C T 1320.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.597;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=3.486;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.69;ReadPosRankSum=0.700;SOR=1.091 GT:AD:DP:GQ:PL 0/1:60,53:113:99:1349,0,1519 chr1 186144799 . T G 1525.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.100;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.41;ReadPosRankSum=-0.620;SOR=0.680 GT:AD:DP:GQ:PL 0/1:47,52:99:99:1554,0,1368 chr1 186145193 . A G 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.791;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.91;ReadPosRankSum=-0.413;SOR=0.188 GT:AD:DP:GQ:PL 0/1:10,4:14:99:125,0,344 chr1 186172169 . G A 1995.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.878;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=3.883;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.40;ReadPosRankSum=0.038;SOR=1.014 GT:AD:DP:GQ:PL 0/1:86,75:161:99:2024,0,2174 chr1 186296816 . T A 765.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.664;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=1.095;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=-0.634;SOR=0.512 GT:AD:DP:GQ:PL 0/1:29,28:57:99:794,0,775 chr1 186301762 . A G 2297.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.48;SOR=1.516 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2326,219,0 chr1 186304862 . C T 472.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.81;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:51:501,51,0 chr1 186307529 . A G 1075.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=0.880 GT:AD:DP:GQ:PL 1/1:0,33:33:98:1104,98,0 chr1 186308857 . A G 1219.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.97;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1248,111,0 chr1 186309087 . A C 1105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.305;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=1.580;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.74;ReadPosRankSum=-1.547;SOR=0.606 GT:AD:DP:GQ:PL 0/1:54,49:103:99:1134,0,1491 chr1 186312564 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 186322207 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.06;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 186327794 . T C 338.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.83;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:367,27,0 chr1 186336782 . A C 1106.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.39;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1135,84,0 chr1 186343781 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 186344117 . A G 726.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.03;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,22:22:66:755,66,0 chr1 186347524 . G C 1279.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.81;SOR=2.362 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1308,117,0 chr1 186352110 . C T 649.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.162;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.13;ReadPosRankSum=0.729;SOR=0.826 GT:AD:DP:GQ:PL 0/1:22,24:46:99:678,0,620 chr1 186360103 . G C 251.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.50;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:280,21,0 chr1 186360125 . C A 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.92;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 186360737 . C G 787.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.51;SOR=1.893 GT:AD:DP:GQ:PL 1/1:0,25:25:75:816,75,0 chr1 186361511 . T C 627.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.56;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:656,48,0 chr1 186375047 . C T 3693.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.458;ClippingRankSum=0.000;DP=273;ExcessHet=3.0103;FS=0.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.58;ReadPosRankSum=0.730;SOR=0.659 GT:AD:DP:GQ:PL 0/1:131,141:272:99:3722,0,3562 chr1 186383215 . A T 2070.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.55;SOR=3.037 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2099,174,0 chr1 186388391 . T C 1256.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=3.086 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1285,109,0 chr1 186393987 . C G 769.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.07;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,24:24:72:798,72,0 chr1 186400837 . C T 808.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.142;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.906;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.63;ReadPosRankSum=-0.040;SOR=0.812 GT:AD:DP:GQ:PL 0/1:53,31:84:99:837,0,1485 chr1 186465386 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 186587138 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 186587194 . G T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 186680089 . A G 1666.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.283;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.75;ReadPosRankSum=-1.323;SOR=0.633 GT:AD:DP:GQ:PL 0/1:50,63:113:99:1695,0,1306 chr1 186730004 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 186833431 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 186854152 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 186870729 . G A 895.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.620;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=0.751;MLEAC=1;MLEAF=0.500;MQ=59.88;MQRankSum=0.783;QD=8.45;ReadPosRankSum=-0.485;SOR=0.818 GT:AD:DP:GQ:PL 0/1:67,39:106:99:924,0,1794 chr1 186893287 . A G 862.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,25:25:75:891,75,0 chr1 186946531 . C A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.33;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 186946532 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.90;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 186950600 . A T 1653.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.78;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1682,132,0 chr1 186950861 . G A 2126.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.87;SOR=2.948 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2155,183,0 chr1 186956036 . A G 313.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:342,27,0 chr1 186956062 . T C 692.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.64;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,20:20:60:721,60,0 chr1 186956420 . T C 1618.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.28;SOR=2.737 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1647,138,0 chr1 186956504 . T G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.78;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 186965739 . G A 304.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.18;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:333,24,0 chr1 186977506 . C T 210.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.429;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.04;ReadPosRankSum=-0.043;SOR=0.346 GT:AD:DP:GQ:PL 0/1:15,6:21:99:239,0,1055 chr1 186977509 . C G 248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.999;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.37;ReadPosRankSum=-0.568;SOR=0.836 GT:AD:DP:GQ:PL 0/1:16,8:24:99:277,0,1052 chr1 186977780 . G A 2173.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2202,192,0 chr1 187047342 . T G 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 187047346 . T A 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 187258530 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 187258535 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 187563259 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 187580441 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 187641405 . A G 615.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.159;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=1.184;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.20;ReadPosRankSum=2.773;SOR=0.996 GT:AD:DP:GQ:PL 0/1:37,18:55:99:644,0,2061 chr1 187641406 . C G 615.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.095;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.62;ReadPosRankSum=2.552;SOR=0.813 GT:AD:DP:GQ:PL 0/1:35,18:53:99:644,0,2061 chr1 187641566 . C A 618.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.980;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=3.416;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=-0.890;SOR=1.255 GT:AD:DP:GQ:PL 0/1:58,25:83:99:647,0,1692 chr1 187641720 . A C 1331.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.846;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=5.047;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.45;ReadPosRankSum=0.933;SOR=0.365 GT:AD:DP:GQ:PL 0/1:47,52:99:99:1360,0,1248 chr1 187647428 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 187804036 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.68;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 187804037 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.68;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 187850222 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.61;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 187850229 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.75;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 187855723 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 187855870 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 188327562 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 188338220 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 188368572 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 188368576 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 188419229 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 188419328 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 188553584 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 188553587 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 188572678 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 188572730 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 188610416 . T A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.86;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 188697054 . G T 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.79;ReadPosRankSum=-0.385;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:117,0,233 chr1 188697057 . C T 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.79;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:117,0,233 chr1 188777157 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 189054836 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 189253831 . C T 283.22 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.720;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.88;ReadPosRankSum=-0.607;SOR=0.836 GT:AD:DP:GQ:PL 0/1:2,13:15:4:310,0,4 chr1 189716424 . T G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 189716425 . A C 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.46;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr1 189798606 . G T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 189801948 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 190262570 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 190373746 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 190625442 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 190791368 . T C 529.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.166;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=6.078;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.81;ReadPosRankSum=0.793;SOR=1.609 GT:AD:DP:GQ:PL 0/1:28,21:49:99:558,0,716 chr1 190793327 . T C 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=0.303;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr1 191146508 . C T 286.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.68;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:30:315,30,0 chr1 191355116 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 191448542 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 191468769 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 191587691 . A C 56.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=14.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:84,12,0 chr1 192159053 . G A 670.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.54;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,20:20:60:699,60,0 chr1 192160240 . G A 598.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.69;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:627,45,0 chr1 192292788 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 192420349 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 192442150 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 192575665 . A G 1514.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.20;SOR=4.073 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1543,123,0 chr1 192651980 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 193082555 . G A 1009.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.115;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.53;ReadPosRankSum=0.490;SOR=0.693 GT:AD:DP:GQ:PL 0/1:28,37:65:99:1038,0,736 chr1 193085024 . G A 590.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.427;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=9.408;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.38;ReadPosRankSum=0.497;SOR=1.871 GT:AD:DP:GQ:PL 0/1:39,24:63:99:619,0,1098 chr1 193105241 . A G 333.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.579;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.89;ReadPosRankSum=-0.330;SOR=0.223 GT:AD:DP:GQ:PL 0/1:10,11:21:99:362,0,342 chr1 193105521 . T A 1110.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.347;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=8.629;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.48;ReadPosRankSum=-1.056;SOR=0.413 GT:AD:DP:GQ:PL 0/1:45,44:89:99:1139,0,1093 chr1 193105978 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.69;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:75:75,0,131 chr1 193121735 . C A 1513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.087;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=3.323;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.61;ReadPosRankSum=1.245;SOR=1.012 GT:AD:DP:GQ:PL 0/1:62,58:120:99:1542,0,1684 chr1 193125245 . T C 771.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.196;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=3.305;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.56;SOR=0.242 GT:AD:DP:GQ:PL 0/1:26,27:53:99:800,0,983 chr1 193135697 . G A 384.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.945;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.38;ReadPosRankSum=0.415;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,12:18:99:413,0,196 chr1 193180624 . A G 1883.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.165;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=3.506;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.67;ReadPosRankSum=0.597;SOR=0.429 GT:AD:DP:GQ:PL 0/1:47,66:113:99:1912,0,1283 chr1 193191684 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 193236142 . T A 1009.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.304;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.85;ReadPosRankSum=-0.869;SOR=0.773 GT:AD:DP:GQ:PL 0/1:33,35:68:99:1038,0,885 chr1 193388579 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 193432663 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 193655525 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 193732199 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 193732262 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.90;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 193732269 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 193732350 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 193732359 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 193757023 . G A 252.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.28;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:30:281,30,0 chr1 193854019 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 193854023 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 193922190 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 193925618 . G C 94.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.80;ReadPosRankSum=1.383;SOR=0.368 GT:AD:DP:GQ:PL 0/1:1,5:6:24:123,0,24 chr1 194028650 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 194104387 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 194189786 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.28;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 194191093 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 194263122 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 194263147 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 194348814 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 194452929 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 195015233 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 195067326 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 195075484 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.19;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr1 195075508 . A G 32.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.92;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:61,0,33 chr1 195075613 . T G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.64;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 195075616 . T G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.30;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 195075619 . T G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.86;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 195142221 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 195142276 . T A 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 195207376 . G A 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=0.792;SOR=1.492 GT:AD:DP:GQ:PL 0/1:3,4:7:70:112,0,70 chr1 195590911 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 195590918 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 195591149 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 195952520 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 195952521 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 196258396 . A G 2614.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=1.240 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2643,225,0 chr1 196273634 . T G 562.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.10;SOR=2.712 GT:AD:DP:GQ:PL 1/1:0,17:17:51:591,51,0 chr1 196282392 . T C 1254.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.91;SOR=2.774 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1283,111,0 chr1 196285840 . C T 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.46;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr1 196342383 . G A 259.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.187;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.43;ReadPosRankSum=-0.912;SOR=0.184 GT:AD:DP:GQ:PL 0/1:9,9:18:99:288,0,322 chr1 196429489 . T C 720.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.75;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,19:19:57:749,57,0 chr1 196429844 . T A 627.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.84;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:656,48,0 chr1 196465601 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 196492383 . C T 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.35;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 196536389 . T C 123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.803;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.38;ReadPosRankSum=-1.383;SOR=0.105 GT:AD:DP:GQ:PL 0/1:4,6:10:99:152,0,137 chr1 196582255 . T G 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr1 196651787 . C T 1137.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.92;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1166,96,0 chr1 196685194 . A C 3767.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.88;SOR=1.028 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3796,366,0 chr1 196689367 . G T 245.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.31;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:27:274,27,0 chr1 196689775 . G A 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.35;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 196690107 . C T 905.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.02;SOR=2.925 GT:AD:DP:GQ:PL 1/1:0,24:24:72:934,72,0 chr1 196701627 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 196715495 . G T 468.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.46;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:497,36,0 chr1 196724321 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 196726612 . A G 3018.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.12;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3047,291,0 chr1 196736796 . C A 163.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.40;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:192,21,0 chr1 196740644 . G T 1283.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.70;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1312,111,0 chr1 196743772 . C T 96.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.57;QD=32.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:124,9,0 chr1 196774797 . A C 177.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.64;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:206,18,0 chr1 196774834 . C A 328.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.89;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:33:357,33,0 chr1 196779546 . A G 388.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.47;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:417,30,0 chr1 196788262 . C T 487.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.44;QD=30.49;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,16:16:48:516,48,0 chr1 196788744 . G A 2806.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.67;SOR=1.092 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2835,193,0 chr1 196788751 . G T 2952.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.39;SOR=1.098 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2981,205,0 chr1 196789018 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 196789648 . G A 252.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.52;QD=25.28;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:30:281,30,0 chr1 196789907 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.68;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 196905226 . G T 613.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.63;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:642,51,0 chr1 196907328 . A G 4075.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.87;SOR=1.915 GT:AD:DP:GQ:PL 1/1:0,124:124:99:4104,371,0 chr1 196949611 . G A 248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.844;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=1.569;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.37;ReadPosRankSum=-0.271;SOR=1.085 GT:AD:DP:GQ:PL 0/1:14,10:24:99:277,0,376 chr1 196951018 . C T 547.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.165;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.40;ReadPosRankSum=0.346;SOR=0.775 GT:AD:DP:GQ:PL 0/1:50,24:74:99:576,0,1413 chr1 196951169 . T A 87.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.502;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.75;ReadPosRankSum=-0.194;SOR=0.223 GT:AD:DP:GQ:PL 0/1:9,4:13:99:116,0,325 chr1 196998328 . G T 605.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.163;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.32;ReadPosRankSum=0.662;SOR=0.758 GT:AD:DP:GQ:PL 0/1:40,25:65:99:634,0,1128 chr1 197039467 . A C 1715.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.77;SOR=1.567 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1744,162,0 chr1 197040378 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 197040668 . A G 684.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.13;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,22:22:66:713,66,0 chr1 197057542 . A G 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.33;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 197060215 . G A 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.44;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 197061071 . T C 1235.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.33;SOR=2.712 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1264,108,0 chr1 197061699 . A T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.385;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 197061891 . C T 1208.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.48;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1237,123,0 chr1 197084243 . G A 1163.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.23;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1192,102,0 chr1 197086652 . T C 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr1 197086795 . T C 1183.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.15;SOR=1.670 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1212,114,0 chr1 197090748 . G A 460.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.94;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:489,36,0 chr1 197090762 . A G 578.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.32;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:607,45,0 chr1 197090798 . A G 955.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.06;SOR=3.098 GT:AD:DP:GQ:PL 1/1:0,26:26:78:984,78,0 chr1 197101646 . C T 106.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.993;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=7.302;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.24;ReadPosRankSum=0.550;SOR=2.290 GT:AD:DP:GQ:PL 0/1:27,6:33:99:135,0,843 chr1 197101685 . T C 1433.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.59;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1462,132,0 chr1 197101771 . A G 1632.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.02;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1661,144,0 chr1 197122407 . A T 2436.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.93;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2465,222,0 chr1 197124900 . C T 171.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.707;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.884;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=0.235;SOR=1.688 GT:AD:DP:GQ:PL 0/1:11,6:17:99:200,0,340 chr1 197129013 . G C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.24;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 197132491 . T C 765.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.40;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,19:19:57:794,57,0 chr1 197133615 . A G 905.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.077;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.12;ReadPosRankSum=-0.388;SOR=0.706 GT:AD:DP:GQ:PL 0/1:21,29:50:99:934,0,627 chr1 197133709 . A C 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr1 197139297 . A G 568.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.44;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,20:20:60:597,60,0 chr1 197139912 . C T 767.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=2.124 GT:AD:DP:GQ:PL 1/1:0,24:24:72:796,72,0 chr1 197143403 . G A 3200.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.79;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3229,276,0 chr1 197143943 . G A 559.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.99;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,16:16:48:588,48,0 chr1 197159340 . G A 713.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.757;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=6.320;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.51;ReadPosRankSum=0.121;SOR=1.706 GT:AD:DP:GQ:PL 0/1:36,26:62:99:742,0,977 chr1 197159596 . G A 2951.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.417;ClippingRankSum=0.000;DP=280;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.54;ReadPosRankSum=-0.665;SOR=0.713 GT:AD:DP:GQ:PL 0/1:159,121:280:99:2980,0,3962 chr1 197166662 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 197172113 . A C 365.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.25;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:33:394,33,0 chr1 197175253 . T G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 197328278 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.32;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 197328287 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.71;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 197328410 . A T 173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.804;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=3.010;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=-0.580;SOR=1.863 GT:AD:DP:GQ:PL 0/1:10,6:16:99:202,0,301 chr1 197344059 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 197347109 . C G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 197347305 . T C 5264.77 PASS AC=2;AF=1.00;AN=2;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.70;SOR=2.064 GT:AD:DP:GQ:PL 1/1:0,161:161:99:5293,482,0 chr1 197356778 . T G 3301.77 PASS AC=2;AF=1.00;AN=2;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.69;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,101:101:99:3330,303,0 chr1 197421238 . A G 4832.77 PASS AC=2;AF=1.00;AN=2;DP=146;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.10;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,146:146:99:4861,438,0 chr1 197435824 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 197438812 . A G 928.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.50;SOR=6.439 GT:AD:DP:GQ:PL 1/1:0,24:24:72:957,72,0 chr1 197510248 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 197513037 . C G 412.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.75;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,13:13:39:441,39,0 chr1 197539247 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr1 197539253 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr1 197539771 . G A 228.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.69;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:257,21,0 chr1 197540895 . G T 681.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.01;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:710,51,0 chr1 197541169 . G A 763.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.11;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,19:19:57:792,57,0 chr1 197546585 . G A 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.30;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr1 197546647 . A T 1654.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.42;SOR=2.511 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1683,138,0 chr1 197642985 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 197645928 . C T 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.77;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 197646000 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 197772821 . C A 1252.73 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.23;SOR=2.356 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1290,138,0 chr1 197773041 . C T 840.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.97;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,22:22:66:869,66,0 chr1 197774968 . G C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.52;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 197907403 . C A 344.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.19;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:373,27,0 chr1 197912873 . C T 218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.473;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.89;ReadPosRankSum=-0.191;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:247,0,134 chr1 197912908 . T C 148.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:177,15,0 chr1 197916413 . G A 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.48;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 197921292 . C G 3441.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.39;SOR=2.935 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3470,277,0 chr1 197927598 . T C 1756.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.30;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1785,138,0 chr1 197928133 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 198198157 . T C 149.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.691;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.52;ReadPosRankSum=-0.015;SOR=1.022 GT:AD:DP:GQ:PL 0/1:7,6:13:99:178,0,151 chr1 198198175 . G A 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.221;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=-0.355;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:145,0,179 chr1 198253327 . A T 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=1.409;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,175 chr1 198256528 . T C 384.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.822;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.49;ReadPosRankSum=-0.649;SOR=0.874 GT:AD:DP:GQ:PL 0/1:10,12:22:99:413,0,351 chr1 198277809 . A C 251.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.38;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:280,21,0 chr1 198319579 . A G 2545.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.64;SOR=2.770 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2574,213,0 chr1 198354649 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 198395107 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 198405309 . T C 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 198515079 . C T 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 198618374 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 198687113 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 198687148 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 198702524 . A G 857.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.706;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=1.907;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.33;ReadPosRankSum=0.686;SOR=0.481 GT:AD:DP:GQ:PL 0/1:49,34:83:99:886,0,1447 chr1 198718030 . T C 840.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.518;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.01;ReadPosRankSum=0.511;SOR=0.518 GT:AD:DP:GQ:PL 0/1:30,30:60:99:869,0,889 chr1 198732160 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.56;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 198734177 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 198735165 . C T 1816.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.32;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1845,174,0 chr1 198735436 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 198739803 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 198739823 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 198752063 . T C 726.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.57;SOR=3.716 GT:AD:DP:GQ:PL 1/1:0,20:20:60:755,60,0 chr1 198752665 . C T 890.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.008;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=1.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.37;ReadPosRankSum=-1.908;SOR=0.519 GT:AD:DP:GQ:PL 0/1:29,33:62:99:919,0,786 chr1 198949373 . T C 434.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.44;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:39:463,39,0 chr1 198949395 . A G 575.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.87;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:17:51:604,51,0 chr1 198949487 . C G 446.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.78;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:45:475,45,0 chr1 199388115 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 199388222 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 199622169 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 199622174 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 199627984 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 199719887 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 200106064 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 200111486 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 200120744 . C T 1224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.100;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=2.343;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.61;ReadPosRankSum=0.555;SOR=0.383 GT:AD:DP:GQ:PL 0/1:47,43:90:99:1253,0,1473 chr1 200120992 . G A 1128.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.294;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=3.785;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.28;ReadPosRankSum=-1.100;SOR=1.287 GT:AD:DP:GQ:PL 0/1:46,39:85:99:1157,0,1370 chr1 200121091 . C T 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.489;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr1 200147826 . C G 826.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.62;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,27:27:81:855,81,0 chr1 200148182 . C T 328.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.89;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:33:357,33,0 chr1 200174153 . C T 1481.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.402;ClippingRankSum=0.000;DP=170;ExcessHet=3.0103;FS=4.879;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.72;ReadPosRankSum=1.075;SOR=0.404 GT:AD:DP:GQ:PL 0/1:114,56:170:99:1510,0,3229 chr1 200180367 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 200213526 . T C 1625.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.77;SOR=3.086 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1654,111,0 chr1 200213536 . C T 1716.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.52;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1745,120,0 chr1 200213706 . A G 6114.77 PASS AC=2;AF=1.00;AN=2;DP=186;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.88;SOR=1.313 GT:AD:DP:GQ:PL 1/1:0,186:186:99:6143,558,0 chr1 200214270 . C A 3045.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.94;QD=32.06;SOR=1.289 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3074,285,0 chr1 200214332 . C T 1914.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.90;QD=33.01;SOR=1.382 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1943,174,0 chr1 200221580 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 200255532 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 200311978 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 200311994 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 200329276 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 200332456 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 200333271 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 200342386 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 200342546 . C A 1121.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.99;SOR=2.235 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1150,99,0 chr1 200342740 . C G 2999.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.33;SOR=0.935 GT:AD:DP:GQ:PL 1/1:0,90:90:99:3028,270,0 chr1 200342782 . T A 1002.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.092;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.19;ReadPosRankSum=0.086;SOR=0.773 GT:AD:DP:GQ:PL 0/1:37,39:76:99:1031,0,1111 chr1 200346590 . T C 68.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:96,9,0 chr1 200356563 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 200357552 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 200357682 . C T 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 200358095 . G C 90.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:118,12,0 chr1 200553223 . A T 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.097;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=1.550;SOR=1.609 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,183 chr1 200554386 . A G 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=0.566;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr1 200555566 . T A 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.40;ReadPosRankSum=-0.566;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:143,0,104 chr1 200565120 . C T 1520.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.512;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=0.649;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.26;ReadPosRankSum=0.849;SOR=0.631 GT:AD:DP:GQ:PL 0/1:74,61:135:99:1549,0,1802 chr1 200566330 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 200569757 . C T 137.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.589;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.218;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.10;ReadPosRankSum=1.690;SOR=1.508 GT:AD:DP:GQ:PL 0/1:11,6:17:99:166,0,272 chr1 200580462 . T C 278.90 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=30.99;ReadPosRankSum=-0.765;SOR=3.056 GT:AD:DP:GQ:PL 0/1:1,8:9:15:307,0,15 chr1 200589235 . T C 299.53 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.107;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=3.358;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.04;ReadPosRankSum=0.000;SOR=0.707 GT:AD:DP:GQ:PL 0/1:1,12:13:3:326,0,3 chr1 200598468 . T G 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.84;ReadPosRankSum=-1.020;SOR=0.976 GT:AD:DP:GQ:PL 0/1:6,8:14:99:292,0,208 chr1 200600264 . C A 2867.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.24;SOR=1.639 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2896,240,0 chr1 200604130 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.16;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 200605831 . T C 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,4:8:99:131,0,131 chr1 200606666 . A G 853.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.529;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=11.482;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.09;ReadPosRankSum=0.348;SOR=2.115 GT:AD:DP:GQ:PL 0/1:46,31:77:99:882,0,1171 chr1 200608965 . G A 1122.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.19;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1151,108,0 chr1 200609091 . T C 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.86;ReadPosRankSum=-2.057;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:180,0,140 chr1 200614252 . T G 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.923;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.04;ReadPosRankSum=-0.140;SOR=0.252 GT:AD:DP:GQ:PL 0/1:15,5:20:99:149,0,532 chr1 200624877 . C T 1193.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.235;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=8.436;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.21;ReadPosRankSum=-1.910;SOR=0.153 GT:AD:DP:GQ:PL 0/1:41,43:84:99:1222,0,1324 chr1 200625112 . G A 2585.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.29;SOR=2.704 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2614,207,0 chr1 200649110 . T C 1559.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.83;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1588,146,0 chr1 200650350 . C A 952.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.56;SOR=6.439 GT:AD:DP:GQ:PL 1/1:0,24:24:72:981,72,0 chr1 200650402 . T C 1978.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.59;SOR=2.958 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2007,167,0 chr1 200663762 . C T 205.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.15;ReadPosRankSum=-0.465;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:234,0,324 chr1 200663832 . T C 595.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.262;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.10;ReadPosRankSum=0.958;SOR=1.022 GT:AD:DP:GQ:PL 0/1:19,18:37:99:624,0,811 chr1 200663838 . A G 623.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.108;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.86;ReadPosRankSum=1.441;SOR=0.468 GT:AD:DP:GQ:PL 0/1:25,20:45:99:652,0,966 chr1 200666422 . T C 3024.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.688;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=0.624;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.72;ReadPosRankSum=-1.936;SOR=0.772 GT:AD:DP:GQ:PL 0/1:70,76:146:99:3053,0,3933 chr1 200666432 . T C 3004.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.788;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=0.597;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.02;ReadPosRankSum=-0.515;SOR=0.780 GT:AD:DP:GQ:PL 0/1:77,81:158:99:3033,0,4108 chr1 200669919 . T G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,78 chr1 200669922 . A C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,78 chr1 200738897 . T C 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr1 200756493 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 200807513 . C T 3266.77 PASS AC=2;AF=1.00;AN=2;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.67;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3295,300,0 chr1 200831358 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 200831442 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 200832917 . C T 145.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.18;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:174,15,0 chr1 200843363 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 200847393 . G T 949.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.79;SOR=3.180 GT:AD:DP:GQ:PL 1/1:0,27:27:81:978,81,0 chr1 200847530 . T C 716.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.44;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,19:19:57:745,57,0 chr1 200852408 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 200866597 . C T 347.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.75;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:38:376,38,0 chr1 200874246 . G C 509.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.040;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.14;ReadPosRankSum=-0.900;SOR=0.621 GT:AD:DP:GQ:PL 0/1:25,17:42:99:538,0,850 chr1 200881571 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 200891082 . A G 273.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.42;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:27:302,27,0 chr1 200898364 . C G 1483.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.569;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.13;ReadPosRankSum=-0.748;SOR=0.639 GT:AD:DP:GQ:PL 0/1:47,58:105:99:1512,0,1125 chr1 200906244 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 200908658 . T C 869.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.069;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=2.957;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.74;ReadPosRankSum=1.982;SOR=0.339 GT:AD:DP:GQ:PL 0/1:30,29:59:99:898,0,939 chr1 200911850 . C T 1036.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.05;QD=30.70;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1065,87,0 chr1 200912044 . C A 1808.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.873;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.66;MQRankSum=-1.657;QD=14.24;ReadPosRankSum=1.516;SOR=0.718 GT:AD:DP:GQ:PL 0/1:60,67:127:99:1837,0,1706 chr1 200913636 . G A 457.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.199;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.61;MQRankSum=-0.448;QD=19.07;ReadPosRankSum=-1.019;SOR=0.730 GT:AD:DP:GQ:PL 0/1:9,15:24:99:486,0,270 chr1 200913666 . G A 290.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.11;MQRankSum=-1.397;QD=19.38;ReadPosRankSum=-0.214;SOR=1.112 GT:AD:DP:GQ:PL 0/1:6,9:15:99:319,0,205 chr1 200948175 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 200958231 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 200960016 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 200972421 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 200975712 . T G 1809.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.40;SOR=3.702 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1838,147,0 chr1 200983208 . C G 831.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.730;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.88;ReadPosRankSum=-0.696;SOR=0.646 GT:AD:DP:GQ:PL 0/1:41,29:70:99:860,0,1247 chr1 200983294 . C A 256.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.058;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=2.350;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.51;ReadPosRankSum=1.150;SOR=0.250 GT:AD:DP:GQ:PL 0/1:10,9:19:99:285,0,317 chr1 200983327 . A G 188.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.16;ReadPosRankSum=2.042;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,6:11:99:217,0,158 chr1 200983358 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 200983687 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 200985058 . T C 579.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.266;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.83;ReadPosRankSum=0.957;SOR=0.559 GT:AD:DP:GQ:PL 0/1:29,20:49:99:608,0,944 chr1 200987160 . A G 4470.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.065;ClippingRankSum=0.000;DP=400;ExcessHet=3.0103;FS=2.664;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.20;ReadPosRankSum=-2.463;SOR=0.831 GT:AD:DP:GQ:PL 0/1:209,190:399:99:4499,0,5093 chr1 200987388 . G A 235.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.799;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.65;ReadPosRankSum=1.907;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,8:12:99:264,0,130 chr1 200988983 . A C 521.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.894;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=4.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.42;ReadPosRankSum=-1.155;SOR=0.300 GT:AD:DP:GQ:PL 0/1:40,22:62:99:550,0,1230 chr1 200989924 . T G 2784.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.470;ClippingRankSum=0.000;DP=227;ExcessHet=3.0103;FS=3.131;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=-1.248;SOR=0.908 GT:AD:DP:GQ:PL 0/1:123,103:226:99:2813,0,3269 chr1 200990174 . G A 2026.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.943;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=0.567;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=0.607;SOR=0.757 GT:AD:DP:GQ:PL 0/1:88,80:168:99:2055,0,2420 chr1 200991097 . C T 2507.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.839;ClippingRankSum=0.000;DP=192;ExcessHet=3.0103;FS=1.952;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.06;ReadPosRankSum=0.668;SOR=0.879 GT:AD:DP:GQ:PL 0/1:100,92:192:99:2536,0,2916 chr1 200991460 . T C 128.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.46;ReadPosRankSum=0.000;SOR=1.872 GT:AD:DP:GQ:PL 0/1:1,5:6:24:157,0,24 chr1 200991758 . C T 3114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.133;ClippingRankSum=0.000;DP=254;ExcessHet=3.0103;FS=2.784;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.41;ReadPosRankSum=-0.163;SOR=0.524 GT:AD:DP:GQ:PL 0/1:118,133:251:99:3143,0,2883 chr1 200991770 . A T 3180.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.116;ClippingRankSum=0.000;DP=240;ExcessHet=3.0103;FS=0.474;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.42;ReadPosRankSum=0.122;SOR=0.656 GT:AD:DP:GQ:PL 0/1:112,125:237:99:3209,0,2736 chr1 200991787 . T C 2858.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.128;ClippingRankSum=0.000;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.55;ReadPosRankSum=0.097;SOR=0.658 GT:AD:DP:GQ:PL 0/1:99,112:211:99:2887,0,2615 chr1 200996473 . G A 695.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.186;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=-0.055;SOR=0.643 GT:AD:DP:GQ:PL 0/1:28,27:55:99:724,0,834 chr1 200998362 . A G 727.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.389;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.56;ReadPosRankSum=1.237;SOR=0.996 GT:AD:DP:GQ:PL 0/1:25,25:50:99:756,0,775 chr1 201005912 . T C 171.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.38;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:200,15,0 chr1 201008593 . C T 392.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.751;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.11;ReadPosRankSum=0.392;SOR=0.573 GT:AD:DP:GQ:PL 0/1:12,14:26:99:421,0,340 chr1 201040769 . T C 1885.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.29;SOR=2.179 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1914,165,0 chr1 201050977 . A G 5591.77 PASS AC=2;AF=1.00;AN=2;DP=168;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.28;SOR=1.554 GT:AD:DP:GQ:PL 1/1:0,168:168:99:5620,505,0 chr1 201051446 . T G 803.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.49;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,24:24:72:832,72,0 chr1 201054308 . C T 323.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.28;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:352,27,0 chr1 201062179 . A C 4835.77 PASS AC=2;AF=1.00;AN=2;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.12;SOR=5.119 GT:AD:DP:GQ:PL 1/1:0,123:123:99:4864,370,0 chr1 201073198 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 201073490 . G A 2316.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.75;SOR=4.875 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2345,180,0 chr1 201073855 . G A 1075.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=6.666 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1104,81,0 chr1 201074173 . C T 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.31;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr1 201075620 . A G 11109.77 PASS AC=2;AF=1.00;AN=2;DP=374;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.71;SOR=0.942 GT:AD:DP:GQ:PL 1/1:0,374:374:99:11138,1120,0 chr1 201077260 . A G 346.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.06;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:375,27,0 chr1 201083512 . G A 885.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.15;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,22:22:66:914,66,0 chr1 201085069 . G T 571.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.171;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=2.284;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.43;ReadPosRankSum=0.867;SOR=0.407 GT:AD:DP:GQ:PL 0/1:53,24:77:99:600,0,1578 chr1 201091397 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201103793 . G A 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr1 201105718 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201105795 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 201105799 . T C 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr1 201106117 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 201107789 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 201109893 . A G 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 201109960 . G A 615.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.95;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,16:16:48:644,48,0 chr1 201110107 . C T 3113.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.934;ClippingRankSum=0.000;DP=214;ExcessHet=3.0103;FS=2.042;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.62;ReadPosRankSum=0.171;SOR=0.510 GT:AD:DP:GQ:PL 0/1:100,113:213:99:3142,0,2988 chr1 201110330 . T A 8545.77 PASS AC=2;AF=1.00;AN=2;DP=259;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.00;SOR=1.781 GT:AD:DP:GQ:PL 1/1:0,259:259:99:8574,775,0 chr1 201110462 . C A 1617.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.29;SOR=5.186 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1646,123,0 chr1 201110590 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201111170 . T C 149.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.40;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:178,21,0 chr1 201111889 . A G 197.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=28.25;ReadPosRankSum=-0.792;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,6:7:24:226,0,24 chr1 201114378 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201114758 . C G 1354.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.640;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.88;ReadPosRankSum=-0.921;SOR=0.770 GT:AD:DP:GQ:PL 0/1:58,56:114:99:1383,0,1591 chr1 201115412 . G A 819.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.585;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.937;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=-0.355;SOR=0.520 GT:AD:DP:GQ:PL 0/1:36,32:68:99:848,0,1027 chr1 201127255 . A G 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 201132285 . C T 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr1 201143853 . A G 2697.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.133;ClippingRankSum=0.000;DP=208;ExcessHet=3.0103;FS=1.086;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.97;ReadPosRankSum=-1.007;SOR=0.601 GT:AD:DP:GQ:PL 0/1:107,101:208:99:2726,0,2930 chr1 201143990 . A G 2026.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.170;ClippingRankSum=0.000;DP=219;ExcessHet=3.0103;FS=4.926;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.25;ReadPosRankSum=-1.803;SOR=1.018 GT:AD:DP:GQ:PL 0/1:133,86:219:99:2055,0,3505 chr1 201146890 . C G 1551.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.670;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=1.683;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=-1.106;SOR=0.883 GT:AD:DP:GQ:PL 0/1:71,55:126:99:1580,0,2073 chr1 201147114 . G A 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr1 201151442 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 201151602 . C A 925.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.357;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=1.145;SOR=1.127 GT:AD:DP:GQ:PL 0/1:19,27:46:99:954,0,575 chr1 201153656 . C T 1172.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=1.781;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.39;ReadPosRankSum=0.295;SOR=0.969 GT:AD:DP:GQ:PL 0/1:57,46:103:99:1201,0,1492 chr1 201153819 . T G 3049.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.165;ClippingRankSum=0.000;DP=227;ExcessHet=3.0103;FS=5.386;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=-0.472;SOR=0.613 GT:AD:DP:GQ:PL 0/1:107,119:226:99:3078,0,2664 chr1 201154105 . C T 184.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.248;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.80;ReadPosRankSum=-1.434;SOR=0.399 GT:AD:DP:GQ:PL 0/1:4,7:11:99:213,0,134 chr1 201171082 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 201194063 . G T 4465.77 PASS AC=2;AF=1.00;AN=2;DP=130;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.35;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,130:130:99:4494,391,0 chr1 201194456 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.33;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 201195802 . A G 869.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.633;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=4.531;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.48;ReadPosRankSum=0.452;SOR=1.219 GT:AD:DP:GQ:PL 0/1:49,34:83:99:898,0,1342 chr1 201196115 . C T 268.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.60;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:297,24,0 chr1 201197255 . G A 13230.77 PASS AC=2;AF=1.00;AN=2;DP=410;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.27;SOR=0.817 GT:AD:DP:GQ:PL 1/1:0,410:410:99:13259,1229,0 chr1 201197307 . T C 10400.77 PASS AC=2;AF=1.00;AN=2;DP=300;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.67;SOR=0.995 GT:AD:DP:GQ:PL 1/1:0,300:300:99:10429,898,0 chr1 201199039 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201199067 . C A 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 201199371 . G A 7444.77 PASS AC=2;AF=1.00;AN=2;DP=226;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.24;SOR=0.805 GT:AD:DP:GQ:PL 1/1:0,224:224:99:7473,671,0 chr1 201199461 . T C 6320.77 PASS AC=2;AF=1.00;AN=2;DP=169;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.25;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,169:169:99:6349,508,0 chr1 201200426 . T G 7923.77 PASS AC=2;AF=1.00;AN=2;DP=242;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.74;SOR=1.679 GT:AD:DP:GQ:PL 1/1:0,242:242:99:7952,725,0 chr1 201201644 . A G 2690.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.06;SOR=2.455 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2719,237,0 chr1 201201696 . C G 4285.77 PASS AC=2;AF=1.00;AN=2;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.83;SOR=1.237 GT:AD:DP:GQ:PL 1/1:0,139:139:99:4314,417,0 chr1 201201879 . T G 283.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.606;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=3.329;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.87;ReadPosRankSum=0.848;SOR=1.385 GT:AD:DP:GQ:PL 0/1:21,11:32:99:312,0,580 chr1 201203976 . C T 6576.77 PASS AC=2;AF=1.00;AN=2;DP=204;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.24;SOR=1.935 GT:AD:DP:GQ:PL 1/1:0,204:204:99:6605,610,0 chr1 201204022 . C A 1821.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.155;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=1.520;SOR=0.775 GT:AD:DP:GQ:PL 0/1:61,65:126:99:1850,0,1715 chr1 201204672 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:32:75,0,32 chr1 201205076 . C T 1686.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.887;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=4.096;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.49;ReadPosRankSum=0.941;SOR=0.799 GT:AD:DP:GQ:PL 0/1:73,62:135:99:1715,0,1994 chr1 201206099 . C A 6316.77 PASS AC=2;AF=1.00;AN=2;DP=196;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.23;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,196:196:99:6345,587,0 chr1 201206146 . A G 2533.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.726;ClippingRankSum=0.000;DP=194;ExcessHet=3.0103;FS=2.486;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.06;ReadPosRankSum=0.012;SOR=0.513 GT:AD:DP:GQ:PL 0/1:98,96:194:99:2562,0,2958 chr1 201206587 . G T 7276.77 PASS AC=2;AF=1.00;AN=2;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.00;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,214:214:99:7305,643,0 chr1 201206890 . A G 6094.77 PASS AC=2;AF=1.00;AN=2;DP=175;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.83;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,175:175:99:6123,526,0 chr1 201209922 . A G 3604.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.614;ClippingRankSum=0.000;DP=629;ExcessHet=3.0103;FS=12.807;MLEAC=1;MLEAF=0.500;MQ=55.95;MQRankSum=-20.793;QD=5.74;ReadPosRankSum=1.531;SOR=1.652 GT:AD:DP:GQ:PL 0/1:498,130:628:99:3633,0,20762 chr1 201209940 . G A 3181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.799;ClippingRankSum=0.000;DP=609;ExcessHet=3.0103;FS=16.169;MLEAC=1;MLEAF=0.500;MQ=55.31;MQRankSum=-16.448;QD=5.23;ReadPosRankSum=-1.677;SOR=1.895 GT:AD:DP:GQ:PL 0/1:498,110:608:99:3210,0,21602 chr1 201209954 . G A 2161.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.397;ClippingRankSum=0.000;DP=579;ExcessHet=3.0103;FS=23.767;MLEAC=1;MLEAF=0.500;MQ=54.29;MQRankSum=-13.873;QD=3.73;ReadPosRankSum=-3.075;SOR=2.444 GT:AD:DP:GQ:PL 0/1:496,83:579:99:2190,0,20708 chr1 201212095 . A G 10501.77 PASS AC=2;AF=1.00;AN=2;DP=305;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.43;SOR=1.049 GT:AD:DP:GQ:PL 1/1:0,305:305:99:10530,915,0 chr1 201218636 . T C 1975.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.005;ClippingRankSum=0.000;DP=176;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.23;ReadPosRankSum=0.198;SOR=0.693 GT:AD:DP:GQ:PL 0/1:94,82:176:99:2004,0,2427 chr1 201218700 . T C 1640.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.600;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=0.651;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.80;ReadPosRankSum=-0.507;SOR=0.581 GT:AD:DP:GQ:PL 0/1:76,63:139:99:1669,0,2029 chr1 201218826 . C T 476.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.047;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.66;ReadPosRankSum=-0.741;SOR=0.446 GT:AD:DP:GQ:PL 0/1:10,17:27:99:505,0,333 chr1 201224371 . G T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 201224540 . G T 822.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.484;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=3.409;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.46;ReadPosRankSum=0.491;SOR=1.445 GT:AD:DP:GQ:PL 0/1:24,26:50:99:851,0,674 chr1 201225991 . C T 2405.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.844;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=6.194;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.00;ReadPosRankSum=0.251;SOR=0.645 GT:AD:DP:GQ:PL 0/1:91,94:185:99:2434,0,2421 chr1 201228171 . G A 382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.415;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=2.509;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.60;ReadPosRankSum=0.512;SOR=0.189 GT:AD:DP:GQ:PL 0/1:19,14:33:99:411,0,694 chr1 201228230 . G C 943.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.017;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=-0.541;SOR=0.706 GT:AD:DP:GQ:PL 0/1:47,34:81:99:972,0,1435 chr1 201228343 . T C 2856.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.378;ClippingRankSum=0.000;DP=237;ExcessHet=3.0103;FS=3.725;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.10;ReadPosRankSum=0.071;SOR=0.939 GT:AD:DP:GQ:PL 0/1:129,107:236:99:2885,0,3429 chr1 201228653 . C T 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.675;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.72;ReadPosRankSum=0.155;SOR=1.214 GT:AD:DP:GQ:PL 0/1:13,9:22:99:286,0,476 chr1 201229055 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201269858 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201278399 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 201278405 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 201283573 . A T 313.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.694;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.94;ReadPosRankSum=-2.019;SOR=0.602 GT:AD:DP:GQ:PL 0/1:11,10:21:99:342,0,362 chr1 201284153 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201296642 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201313039 . C G 1359.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.078;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=8.179;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.92;ReadPosRankSum=0.063;SOR=0.067 GT:AD:DP:GQ:PL 0/1:23,42:65:99:1388,0,752 chr1 201313445 . A G 2201.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.291;ClippingRankSum=0.000;DP=177;ExcessHet=3.0103;FS=1.172;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.816;SOR=0.775 GT:AD:DP:GQ:PL 0/1:95,82:177:99:2230,0,2506 chr1 201316781 . A G 2791.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.36;SOR=5.255 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2820,216,0 chr1 201317500 . C G 2463.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.06;SOR=2.262 GT:AD:DP:GQ:PL 1/1:0,57:57:99:2492,172,0 chr1 201318401 . T C 125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.97;ReadPosRankSum=0.241;SOR=0.527 GT:AD:DP:GQ:PL 0/1:2,5:7:62:154,0,62 chr1 201318879 . G A 926.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.96;SOR=1.460 GT:AD:DP:GQ:PL 1/1:0,29:29:87:955,87,0 chr1 201319540 . G A 46.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:21:75,0,21 chr1 201319770 . A C 7164.77 PASS AC=2;AF=1.00;AN=2;DP=210;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.12;SOR=2.004 GT:AD:DP:GQ:PL 1/1:0,210:210:99:7193,630,0 chr1 201320518 . T C 1860.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.53;SOR=4.362 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1889,141,0 chr1 201320803 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 201321840 . T G 2117.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.42;SOR=2.872 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2146,177,0 chr1 201321938 . C T 4828.77 PASS AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.98;SOR=1.345 GT:AD:DP:GQ:PL 1/1:0,151:151:99:4857,453,0 chr1 201322982 . T C 4670.77 PASS AC=2;AF=1.00;AN=2;DP=142;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.89;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,142:142:99:4699,426,0 chr1 201323360 . C T 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.73;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr1 201324842 . C T 2255.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.04;SOR=3.370 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2284,183,0 chr1 201324857 . G A 1069.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.249;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=1.184;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.65;ReadPosRankSum=0.443;SOR=0.904 GT:AD:DP:GQ:PL 0/1:39,34:73:99:1098,0,1210 chr1 201325150 . G A 1784.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.420;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=0.755;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.32;ReadPosRankSum=-0.460;SOR=0.584 GT:AD:DP:GQ:PL 0/1:70,64:134:99:1813,0,2061 chr1 201332745 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201332778 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201359577 . G A 3384.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.169;ClippingRankSum=0.000;DP=314;ExcessHet=3.0103;FS=0.429;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.03;ReadPosRankSum=0.428;SOR=0.727 GT:AD:DP:GQ:PL 0/1:173,134:307:99:3413,0,4696 chr1 201362426 . T G 4750.77 PASS AC=2;AF=1.00;AN=2;DP=148;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.10;SOR=0.720 GT:AD:DP:GQ:PL 1/1:0,148:148:99:4779,444,0 chr1 201362536 . C A 3333.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.73;SOR=1.896 GT:AD:DP:GQ:PL 1/1:0,96:96:99:3362,288,0 chr1 201365254 . G A 6216.77 PASS AC=2;AF=1.00;AN=2;DP=187;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.24;SOR=1.197 GT:AD:DP:GQ:PL 1/1:0,187:187:99:6245,562,0 chr1 201366771 . C T 2407.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.40;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2436,209,0 chr1 201367258 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 201367513 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201367856 . C T 1158.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.32;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1187,111,0 chr1 201368042 . A G 2459.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.64;SOR=2.082 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2488,213,0 chr1 201369425 . T C 3211.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.94;SOR=2.610 GT:AD:DP:GQ:PL 1/1:0,89:89:99:3240,267,0 chr1 201369458 . A G 2619.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.26;SOR=4.375 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2648,202,0 chr1 201369768 . T C 6902.77 PASS AC=2;AF=1.00;AN=2;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.52;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,219:219:99:6931,657,0 chr1 201369915 . C T 4350.77 PASS AC=2;AF=1.00;AN=2;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.71;SOR=1.775 GT:AD:DP:GQ:PL 1/1:0,133:133:99:4379,398,0 chr1 201372213 . C T 3609.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.23;SOR=1.877 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3638,336,0 chr1 201379134 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.60;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 201379135 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.17;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 201384542 . G A 93.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0 chr1 201384699 . G C 1053.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.82;SOR=2.621 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1082,90,0 chr1 201387300 . C A 1930.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.48;SOR=2.221 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1959,168,0 chr1 201412475 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201413422 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 201414488 . A G 2067.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.33;SOR=2.035 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2096,196,0 chr1 201414515 . A C 2604.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.38;SOR=1.554 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2633,247,0 chr1 201425181 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201440276 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 201468349 . A T 1167.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.573;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=9.125;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.98;ReadPosRankSum=1.576;SOR=0.188 GT:AD:DP:GQ:PL 0/1:50,40:90:99:1196,0,1681 chr1 201484161 . T C 879.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.691;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=2.792;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.75;ReadPosRankSum=0.839;SOR=0.299 GT:AD:DP:GQ:PL 0/1:37,32:69:99:908,0,1194 chr1 201495806 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 201520157 . G C 569.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.137;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=3.014;MLEAC=1;MLEAF=0.500;MQ=57.12;MQRankSum=-3.233;QD=15.83;ReadPosRankSum=-1.940;SOR=1.166 GT:AD:DP:GQ:PL 0/1:15,21:36:99:598,0,348 chr1 201520174 . C T 575.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.265;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.47;MQRankSum=-3.668;QD=14.04;ReadPosRankSum=-0.142;SOR=0.602 GT:AD:DP:GQ:PL 0/1:20,21:41:99:604,0,508 chr1 201543940 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 201548221 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 201565443 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201572791 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201595781 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201618253 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201639676 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 201639685 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 201639731 . G T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 201642362 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 201655710 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201674391 . T G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.01;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 201674392 . G T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.13;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 201676481 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 201696150 . A G 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr1 201711323 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201718278 . G A 3261.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.46;SOR=3.690 GT:AD:DP:GQ:PL 1/1:0,85:85:99:3290,256,0 chr1 201718323 . A G 5081.77 PASS AC=2;AF=1.00;AN=2;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.96;SOR=1.685 GT:AD:DP:GQ:PL 1/1:0,159:159:99:5110,477,0 chr1 201719387 . T A 662.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.88;SOR=2.948 GT:AD:DP:GQ:PL 1/1:0,19:19:57:691,57,0 chr1 201719704 . T C 1084.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.90;SOR=1.418 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1113,102,0 chr1 201719769 . T C 414.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.12;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:443,33,0 chr1 201719827 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 201755384 . G A 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr1 201780392 . G C 2616.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.53;SOR=1.395 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2645,248,0 chr1 201783036 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 201783301 . A C 1366.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.34;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1395,114,0 chr1 201785592 . G A 504.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.800;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=4.298;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.83;ReadPosRankSum=-1.105;SOR=0.188 GT:AD:DP:GQ:PL 0/1:11,19:30:99:533,0,335 chr1 201794056 . T C 1267.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.072;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=3.464;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.84;ReadPosRankSum=-0.549;SOR=1.058 GT:AD:DP:GQ:PL 0/1:64,53:117:99:1296,0,1651 chr1 201794371 . C T 309.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.728;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=8.671;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.91;ReadPosRankSum=-1.923;SOR=2.939 GT:AD:DP:GQ:PL 0/1:16,10:26:99:338,0,522 chr1 201794784 . T C 422.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.185;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.421;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.08;ReadPosRankSum=-0.346;SOR=1.058 GT:AD:DP:GQ:PL 0/1:20,15:35:99:451,0,562 chr1 201819676 . G A 239.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.006;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.32;ReadPosRankSum=0.683;SOR=0.512 GT:AD:DP:GQ:PL 0/1:10,8:18:99:268,0,362 chr1 201852315 . T C 1071.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.293;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=2.743;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.29;ReadPosRankSum=-0.548;SOR=1.299 GT:AD:DP:GQ:PL 0/1:27,35:62:99:1100,0,733 chr1 201855262 . G A 1065.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.413;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=0.800;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.22;ReadPosRankSum=0.264;SOR=0.859 GT:AD:DP:GQ:PL 0/1:53,42:95:99:1094,0,1417 chr1 201856149 . C T 37.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.44;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:28:66,0,28 chr1 201857212 . C T 951.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.295;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=2.692;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.13;ReadPosRankSum=1.737;SOR=0.847 GT:AD:DP:GQ:PL 0/1:54,40:94:99:980,0,1394 chr1 201857354 . C T 576.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.862;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=6.778;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.96;ReadPosRankSum=0.310;SOR=0.117 GT:AD:DP:GQ:PL 0/1:13,21:34:99:605,0,407 chr1 201861177 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 201863323 . T G 864.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.51;SOR=3.352 GT:AD:DP:GQ:PL 1/1:0,23:23:69:893,69,0 chr1 201863736 . G C 1546.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.592;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.97;ReadPosRankSum=0.049;SOR=0.748 GT:AD:DP:GQ:PL 0/1:85,56:141:99:1575,0,2401 chr1 201868979 . G A 1675.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.715;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=4.024;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.95;ReadPosRankSum=-0.913;SOR=0.203 GT:AD:DP:GQ:PL 0/1:33,51:84:99:1704,0,1087 chr1 201870130 . C G 33.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:61,6,0 chr1 201870135 . A T 33.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.74;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:61,6,0 chr1 201871336 . T C 3086.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.16;SOR=2.196 GT:AD:DP:GQ:PL 1/1:0,86:86:99:3115,258,0 chr1 201875000 . G A 4064.77 PASS AC=2;AF=1.00;AN=2;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.45;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,118:118:99:4093,353,0 chr1 201891498 . A G 1436.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.667;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.835;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.14;ReadPosRankSum=-0.079;SOR=0.603 GT:AD:DP:GQ:PL 0/1:36,53:89:99:1465,0,1020 chr1 201891662 . C G 320.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.733;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.37;ReadPosRankSum=-0.266;SOR=0.755 GT:AD:DP:GQ:PL 0/1:13,11:24:99:349,0,403 chr1 201891888 . C G 645.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.720;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=2.495;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.92;ReadPosRankSum=-1.589;SOR=0.371 GT:AD:DP:GQ:PL 0/1:27,23:50:99:674,0,705 chr1 201896635 . A G 1727.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.145;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=9.289;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.00;ReadPosRankSum=1.763;SOR=0.289 GT:AD:DP:GQ:PL 0/1:75,69:144:99:1756,0,2286 chr1 201900129 . G A 1342.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.235;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=3.099;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.29;ReadPosRankSum=-0.408;SOR=1.136 GT:AD:DP:GQ:PL 0/1:53,48:101:99:1371,0,1569 chr1 201915687 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 201924968 . A C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 201929092 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 201939039 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 201946530 . A C 134.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.98;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:163,15,0 chr1 201957041 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 201969354 . C T 132.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.810;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.30;ReadPosRankSum=-0.521;SOR=1.445 GT:AD:DP:GQ:PL 0/1:11,5:16:99:161,0,311 chr1 201978768 . C T 391.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.957;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=6.914;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.11;ReadPosRankSum=0.289;SOR=0.163 GT:AD:DP:GQ:PL 0/1:25,18:43:99:420,0,779 chr1 201989184 . C G 915.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.568;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=1.483;SOR=0.662 GT:AD:DP:GQ:PL 0/1:36,29:65:99:944,0,1189 chr1 201997145 . G A 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.19;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:101,0,30 chr1 201997646 . T C 1936.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.229;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=1.440;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.64;ReadPosRankSum=0.772;SOR=0.560 GT:AD:DP:GQ:PL 0/1:73,69:142:99:1965,0,1851 chr1 201999954 . G A 2125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.536;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=2.038;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=0.292;SOR=0.522 GT:AD:DP:GQ:PL 0/1:82,83:165:99:2154,0,2180 chr1 202001434 . T C 11876.77 PASS AC=2;AF=1.00;AN=2;DP=372;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.01;SOR=0.978 GT:AD:DP:GQ:PL 1/1:0,371:371:99:11905,1113,0 chr1 202001620 . G A 1591.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.662;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=1.378;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=1.771;SOR=0.836 GT:AD:DP:GQ:PL 0/1:74,58:132:99:1620,0,2127 chr1 202002856 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 202002953 . A G 338.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.93;ReadPosRankSum=0.459;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,10:17:99:367,0,241 chr1 202005375 . C T 251.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.09;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:280,21,0 chr1 202010991 . C G 1430.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.62;SOR=4.351 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1459,111,0 chr1 202012090 . C G 4401.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.251;ClippingRankSum=0.000;DP=304;ExcessHet=3.0103;FS=0.926;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.53;ReadPosRankSum=0.703;SOR=0.780 GT:AD:DP:GQ:PL 0/1:140,163:303:99:4430,0,3849 chr1 202012226 . T C 2088.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.994;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=4.861;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.08;ReadPosRankSum=-0.091;SOR=0.773 GT:AD:DP:GQ:PL 0/1:50,54:104:99:2117,0,3621 chr1 202012227 . G C 2088.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.688;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=4.861;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.28;ReadPosRankSum=-0.288;SOR=0.794 GT:AD:DP:GQ:PL 0/1:49,54:103:99:2117,0,3621 chr1 202012734 . T C 1288.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.190;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=0.767;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.04;ReadPosRankSum=2.496;SOR=0.565 GT:AD:DP:GQ:PL 0/1:56,51:107:99:1317,0,1544 chr1 202022088 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 202023840 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 202055662 . C T 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr1 202076857 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 202092819 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 202122918 . C T 522.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.67;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,16:16:48:551,48,0 chr1 202123232 . G A 7423.77 PASS AC=2;AF=1.00;AN=2;DP=230;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.28;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,230:230:99:7452,689,0 chr1 202123287 . A G 9464.77 PASS AC=2;AF=1.00;AN=2;DP=283;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.44;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,283:283:99:9493,849,0 chr1 202123452 . T C 11172.77 PASS AC=2;AF=1.00;AN=2;DP=346;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.29;SOR=0.716 GT:AD:DP:GQ:PL 1/1:0,346:346:99:11201,1038,0 chr1 202127687 . G A 1494.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.020;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=0.535;SOR=0.747 GT:AD:DP:GQ:PL 0/1:56,58:114:99:1523,0,1554 chr1 202128950 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 202134638 . C T 1156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.820;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.30;ReadPosRankSum=-0.652;SOR=0.696 GT:AD:DP:GQ:PL 0/1:48,39:87:99:1185,0,1372 chr1 202134674 . G A 737.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.039;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=1.927;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.17;ReadPosRankSum=0.260;SOR=0.249 GT:AD:DP:GQ:PL 0/1:32,24:56:99:766,0,1068 chr1 202137669 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 202144707 . T G 3039.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.92;SOR=5.838 GT:AD:DP:GQ:PL 1/1:0,76:76:99:3068,228,0 chr1 202145341 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 202150077 . C A 512.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.72;ReadPosRankSum=-2.415;SOR=0.330 GT:AD:DP:GQ:PL 0/1:11,15:26:99:541,0,381 chr1 202150180 . T C 2363.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.274;ClippingRankSum=0.000;DP=200;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.82;ReadPosRankSum=-0.686;SOR=0.642 GT:AD:DP:GQ:PL 0/1:112,88:200:99:2392,0,3163 chr1 202152515 . G A 1246.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.374;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=6.964;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.50;ReadPosRankSum=0.086;SOR=1.846 GT:AD:DP:GQ:PL 0/1:45,41:86:99:1275,0,1390 chr1 202153485 . C T 313.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:342,27,0 chr1 202153655 . C A 1589.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.567;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=8.103;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.59;ReadPosRankSum=0.738;SOR=0.231 GT:AD:DP:GQ:PL 0/1:52,57:109:99:1618,0,1648 chr1 202156771 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 202160698 . T C 2590.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.59;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2619,246,0 chr1 202161626 . T C 1837.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.03;SOR=1.118 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1866,162,0 chr1 202167962 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 202171187 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 202171272 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 202171510 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 202180633 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 202183731 . A C 3945.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.622;ClippingRankSum=0.000;DP=314;ExcessHet=3.0103;FS=1.903;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.57;ReadPosRankSum=0.745;SOR=0.810 GT:AD:DP:GQ:PL 0/1:158,156:314:99:3974,0,4093 chr1 202186415 . A C 1937.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.571;ClippingRankSum=0.000;DP=177;ExcessHet=3.0103;FS=2.669;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.01;ReadPosRankSum=-1.103;SOR=0.511 GT:AD:DP:GQ:PL 0/1:100,76:176:99:1966,0,2599 chr1 202187354 . G A 2112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.367;ClippingRankSum=0.000;DP=130;ExcessHet=3.0103;FS=1.548;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.25;ReadPosRankSum=1.020;SOR=0.919 GT:AD:DP:GQ:PL 0/1:54,76:130:99:2141,0,1308 chr1 202187500 . A C 2079.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.376;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=3.657;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.19;ReadPosRankSum=1.640;SOR=1.088 GT:AD:DP:GQ:PL 0/1:49,72:121:99:2108,0,1292 chr1 202193935 . T C 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.471;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.56;ReadPosRankSum=-0.023;SOR=2.494 GT:AD:DP:GQ:PL 0/1:8,4:12:99:131,0,215 chr1 202194388 . C A 477.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.275;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=8.506;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.48;ReadPosRankSum=2.086;SOR=2.303 GT:AD:DP:GQ:PL 0/1:16,17:33:99:506,0,365 chr1 202203641 . T G 798.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.225;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.19;ReadPosRankSum=1.440;SOR=0.616 GT:AD:DP:GQ:PL 0/1:12,24:36:99:827,0,393 chr1 202219421 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 202219423 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 202220636 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 202224753 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 202224760 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 202225313 . G C 956.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.111;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=1.987;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.48;ReadPosRankSum=-0.440;SOR=1.214 GT:AD:DP:GQ:PL 0/1:41,30:71:99:985,0,1372 chr1 202227803 . G A 497.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.369;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.377;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.22;ReadPosRankSum=0.886;SOR=0.357 GT:AD:DP:GQ:PL 0/1:15,20:35:99:526,0,385 chr1 202281754 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 202297419 . C T 2133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.463;ClippingRankSum=0.000;DP=187;ExcessHet=3.0103;FS=1.186;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.41;ReadPosRankSum=0.755;SOR=0.817 GT:AD:DP:GQ:PL 0/1:106,81:187:99:2162,0,2938 chr1 202297479 . C T 2818.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.043;ClippingRankSum=0.000;DP=236;ExcessHet=3.0103;FS=5.270;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.94;ReadPosRankSum=-1.606;SOR=0.574 GT:AD:DP:GQ:PL 0/1:120,116:236:99:2847,0,3248 chr1 202297735 . A G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.524;SOR=2.833 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 202300624 . C T 176.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.78;ReadPosRankSum=-1.425;SOR=0.399 GT:AD:DP:GQ:PL 0/1:9,6:15:99:205,0,319 chr1 202305808 . T C 3417.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.142;ClippingRankSum=0.000;DP=250;ExcessHet=3.0103;FS=2.788;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.67;ReadPosRankSum=0.319;SOR=0.534 GT:AD:DP:GQ:PL 0/1:115,135:250:99:3446,0,2957 chr1 202306070 . C A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 202307366 . C T 1358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.440;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=0.758;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.94;ReadPosRankSum=-0.614;SOR=0.813 GT:AD:DP:GQ:PL 0/1:56,49:105:99:1387,0,1465 chr1 202314373 . G C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 202314539 . A G 1054.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.360;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=13.262;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.70;ReadPosRankSum=-1.080;SOR=0.071 GT:AD:DP:GQ:PL 0/1:39,38:77:99:1083,0,1339 chr1 202318078 . T C 3367.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.637;ClippingRankSum=0.000;DP=253;ExcessHet=3.0103;FS=11.103;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.31;ReadPosRankSum=0.867;SOR=0.600 GT:AD:DP:GQ:PL 0/1:120,133:253:99:3396,0,3206 chr1 202318409 . G A 1676.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.171;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.21;ReadPosRankSum=-1.939;SOR=0.628 GT:AD:DP:GQ:PL 0/1:54,64:118:99:1705,0,1493 chr1 202318685 . T C 1549.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.630;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=1.625;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.50;ReadPosRankSum=1.087;SOR=0.542 GT:AD:DP:GQ:PL 0/1:44,56:100:99:1578,0,1128 chr1 202319334 . C A 361.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.307;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=4.684;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.73;ReadPosRankSum=0.478;SOR=0.129 GT:AD:DP:GQ:PL 0/1:6,17:23:99:390,0,148 chr1 202332163 . A G 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.108;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 202335740 . T C 2178.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.444;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=1.195;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.74;ReadPosRankSum=0.863;SOR=0.596 GT:AD:DP:GQ:PL 0/1:79,92:171:99:2207,0,2071 chr1 202349188 . A C 2585.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.390;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=0.572;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.61;ReadPosRankSum=-1.200;SOR=0.758 GT:AD:DP:GQ:PL 0/1:109,96:205:99:2614,0,3046 chr1 202416947 . T C 2705.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2734,249,0 chr1 202439390 . C T 846.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.828;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=3.460;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.11;ReadPosRankSum=-0.318;SOR=0.501 GT:AD:DP:GQ:PL 0/1:29,31:60:99:875,0,860 chr1 202439466 . C T 785.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.822;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.924;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.73;ReadPosRankSum=0.824;SOR=0.772 GT:AD:DP:GQ:PL 0/1:35,32:67:99:814,0,1015 chr1 202439623 . A C 498.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.183;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=3.764;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-1.640;SOR=0.223 GT:AD:DP:GQ:PL 0/1:13,19:32:99:527,0,378 chr1 202439672 . T C 344.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.989;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.884;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.28;ReadPosRankSum=-1.013;SOR=0.204 GT:AD:DP:GQ:PL 0/1:6,11:17:99:373,0,193 chr1 202488656 . T A 1625.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.729;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=3.995;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.92;ReadPosRankSum=-0.034;SOR=0.397 GT:AD:DP:GQ:PL 0/1:46,63:109:99:1654,0,1250 chr1 202488745 . T C 526.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.377;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.95;ReadPosRankSum=0.090;SOR=1.270 GT:AD:DP:GQ:PL 0/1:9,15:24:99:555,0,272 chr1 202495152 . G A 93.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.25;ReadPosRankSum=0.467;SOR=0.160 GT:AD:DP:GQ:PL 0/1:11,4:15:99:122,0,413 chr1 202549822 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 202562613 . C T 165.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.236;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=1.756;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.91;ReadPosRankSum=1.973;SOR=1.165 GT:AD:DP:GQ:PL 0/1:16,8:24:99:194,0,392 chr1 202564752 . C T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.842;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,145 chr1 202567720 . C T 959.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.526;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=1.814;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.29;ReadPosRankSum=-2.365;SOR=0.469 GT:AD:DP:GQ:PL 0/1:47,38:85:99:988,0,1333 chr1 202596820 . G A 1720.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.767;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=0.641;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.47;ReadPosRankSum=0.490;SOR=0.607 GT:AD:DP:GQ:PL 0/1:66,72:138:99:1749,0,1788 chr1 202599378 . A G 3200.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.884;ClippingRankSum=0.000;DP=223;ExcessHet=3.0103;FS=0.531;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-0.949;SOR=0.631 GT:AD:DP:GQ:PL 0/1:106,117:223:99:3229,0,2735 chr1 202600749 . G A 647.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.61;ReadPosRankSum=1.324;SOR=1.609 GT:AD:DP:GQ:PL 0/1:20,19:39:99:676,0,718 chr1 202605656 . G A 3013.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.852;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=2.618;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.30;ReadPosRankSum=0.059;SOR=0.927 GT:AD:DP:GQ:PL 0/1:93,104:197:99:3042,0,2454 chr1 202619467 . C T 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr1 202621478 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 202630177 . C T 77.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.80;MQRankSum=-0.253;QD=15.56;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:106,0,27 chr1 202644435 . G C 110.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.82;ReadPosRankSum=-0.712;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:29:139,0,29 chr1 202646979 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 202647023 . C T 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 202663819 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 202666183 . A T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 202679357 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 202689865 . C T 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr1 202693974 . C G 104.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:132,12,0 chr1 202706266 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 202706415 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 202708977 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 202715729 . G A 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 202715740 . C T 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr1 202733225 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.46;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 202733925 . G A 2348.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.11;SOR=1.580 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2377,233,0 chr1 202735732 . G A 782.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.20;SOR=4.712 GT:AD:DP:GQ:PL 1/1:0,21:21:63:811,63,0 chr1 202736327 . G C 3644.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.39;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3673,372,0 chr1 202742222 . T C 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.28;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 202746156 . G A 2368.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.76;SOR=0.948 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2397,230,0 chr1 202748900 . A G 812.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.94;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:841,63,0 chr1 202749074 . G A 2841.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.93;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2870,267,0 chr1 202752720 . G A 723.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.93;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:752,54,0 chr1 202753149 . G A 1088.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.02;SOR=2.448 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1117,96,0 chr1 202753220 . A G 300.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:329,24,0 chr1 202756158 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.42;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 202759268 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 202760258 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:81,0,30 chr1 202760778 . A G 385.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.23;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:414,30,0 chr1 202760804 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 202764110 . C T 3512.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.55;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3541,345,0 chr1 202766623 . T C 5576.77 PASS AC=2;AF=1.00;AN=2;DP=185;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.14;SOR=0.918 GT:AD:DP:GQ:PL 1/1:0,185:185:99:5605,553,0 chr1 202774506 . G T 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.85;ReadPosRankSum=-0.366;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,2:8:59:59,0,227 chr1 202774764 . T C 601.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.046;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=1.050;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.75;ReadPosRankSum=0.350;SOR=0.862 GT:AD:DP:GQ:PL 0/1:32,24:56:99:630,0,811 chr1 202774955 . T C 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.842;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr1 202796114 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 202796151 . C T 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr1 202811535 . T C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 202811679 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 202821409 . G T 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr1 202825659 . T C 2242.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.671;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=1.221;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.35;ReadPosRankSum=0.012;SOR=0.820 GT:AD:DP:GQ:PL 0/1:81,87:168:99:2271,0,2242 chr1 202838975 . A T 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr1 202844192 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 202852808 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 202857960 . A G 388.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.86;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:417,30,0 chr1 202858063 . G A 1124.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.844;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.904;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.08;ReadPosRankSum=0.123;SOR=0.551 GT:AD:DP:GQ:PL 0/1:42,44:86:99:1153,0,1155 chr1 202858270 . A G 975.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.587;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=2.383;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.19;ReadPosRankSum=0.780;SOR=0.399 GT:AD:DP:GQ:PL 0/1:38,36:74:99:1004,0,1192 chr1 202858423 . A G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=1.282;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 202862741 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 202867532 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 202870530 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 202870533 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 202873807 . C T 314.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.680;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.197;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=-0.376;SOR=0.269 GT:AD:DP:GQ:PL 0/1:9,12:21:99:343,0,267 chr1 202886380 . C T 38.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr1 202892438 . A G 209.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.97;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:238,18,0 chr1 202897287 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 202901202 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 202909326 . T A 531.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.07;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:560,45,0 chr1 202909364 . T A 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr1 202912174 . C T 545.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.10;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:51:574,51,0 chr1 202912481 . T C 404.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.73;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:36:433,36,0 chr1 202918167 . G A 1545.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.20;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1574,144,0 chr1 202920079 . T C 175.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.03;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:204,15,0 chr1 202924791 . C T 189.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.64;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:218,18,0 chr1 202928303 . A G 1214.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.71;SOR=4.863 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1243,103,0 chr1 202935920 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 202965637 . C T 217.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.429;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.447;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.58;ReadPosRankSum=-0.399;SOR=0.998 GT:AD:DP:GQ:PL 0/1:26,13:39:99:255,0,727 chr1 202972217 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 203001566 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 203001589 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 203001610 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 203008904 . C G 459.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.527;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.22;ReadPosRankSum=-0.188;SOR=0.693 GT:AD:DP:GQ:PL 0/1:26,19:45:99:488,0,749 chr1 203017815 . T A 32.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.92;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:61,0,33 chr1 203018642 . T C 128.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.783;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.15;ReadPosRankSum=1.505;SOR=0.569 GT:AD:DP:GQ:PL 0/1:17,8:25:99:157,0,533 chr1 203018668 . G A 131.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.560;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.49;ReadPosRankSum=-0.806;SOR=0.446 GT:AD:DP:GQ:PL 0/1:16,8:24:99:160,0,482 chr1 203035239 . C T 1099.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.875;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.18;ReadPosRankSum=-0.389;SOR=0.853 GT:AD:DP:GQ:PL 0/1:30,34:64:99:1128,0,879 chr1 203036970 . A G 373.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.67;ReadPosRankSum=-1.278;SOR=0.317 GT:AD:DP:GQ:PL 0/1:8,11:19:99:402,0,277 chr1 203037051 . G A 949.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.240;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=7.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.61;ReadPosRankSum=1.083;SOR=1.680 GT:AD:DP:GQ:PL 0/1:32,33:65:99:978,0,789 chr1 203037115 . A G 3213.77 PASS AC=2;AF=1.00;AN=2;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.46;SOR=1.037 GT:AD:DP:GQ:PL 1/1:0,99:99:99:3242,296,0 chr1 203037455 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 203039046 . G C 14489.77 PASS AC=2;AF=1.00;AN=2;DP=430;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.70;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,430:430:99:14518,1289,0 chr1 203039158 . C G 4038.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;ClippingRankSum=0.000;DP=315;ExcessHet=3.0103;FS=0.892;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.86;ReadPosRankSum=0.089;SOR=0.775 GT:AD:DP:GQ:PL 0/1:164,150:314:99:4067,0,4415 chr1 203043577 . C G 3452.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.352;ClippingRankSum=0.000;DP=267;ExcessHet=3.0103;FS=0.486;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.93;ReadPosRankSum=0.651;SOR=0.634 GT:AD:DP:GQ:PL 0/1:138,129:267:99:3481,0,3733 chr1 203043778 . G A 1434.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.61;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1463,132,0 chr1 203045068 . T C 288.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.726;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-0.196;SOR=1.051 GT:AD:DP:GQ:PL 0/1:12,10:22:99:317,0,367 chr1 203047959 . C T 77.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=7.782;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.64;ReadPosRankSum=1.559;SOR=0.027 GT:AD:DP:GQ:PL 0/1:5,4:9:99:106,0,182 chr1 203049062 . G C 1425.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.505;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=0.758;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.40;ReadPosRankSum=0.691;SOR=0.564 GT:AD:DP:GQ:PL 0/1:47,52:99:99:1454,0,1245 chr1 203057075 . T G 1561.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.96;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1590,120,0 chr1 203057086 . T G 412.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.237;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=11.579;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.79;ReadPosRankSum=0.024;SOR=0.024 GT:AD:DP:GQ:PL 0/1:20,15:35:99:441,0,716 chr1 203059243 . G T 1584.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.253;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=2.343;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.78;ReadPosRankSum=-0.804;SOR=0.467 GT:AD:DP:GQ:PL 0/1:62,62:124:99:1613,0,1539 chr1 203059583 . C G 2082.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.052;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=3.185;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.65;ReadPosRankSum=1.362;SOR=1.332 GT:AD:DP:GQ:PL 0/1:57,61:118:99:2111,0,1887 chr1 203059889 . A C 2236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.421;ClippingRankSum=0.000;DP=145;ExcessHet=3.0103;FS=1.647;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.43;ReadPosRankSum=-1.364;SOR=0.873 GT:AD:DP:GQ:PL 0/1:70,75:145:99:2265,0,2046 chr1 203061557 . T C 1434.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.365;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=5.196;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.76;ReadPosRankSum=-0.831;SOR=1.118 GT:AD:DP:GQ:PL 0/1:90,57:147:99:1463,0,2500 chr1 203067629 . T C 2863.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.074;ClippingRankSum=0.000;DP=244;ExcessHet=3.0103;FS=0.482;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.74;ReadPosRankSum=1.213;SOR=0.651 GT:AD:DP:GQ:PL 0/1:133,111:244:99:2892,0,3617 chr1 203071545 . A G 2217.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.87;SOR=4.066 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2246,174,0 chr1 203071612 . T C 2190.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.365;ClippingRankSum=0.000;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.11;ReadPosRankSum=0.894;SOR=0.644 GT:AD:DP:GQ:PL 0/1:74,71:145:99:2219,0,2294 chr1 203071688 . G C 3542.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.993;ClippingRankSum=0.000;DP=295;ExcessHet=3.0103;FS=0.426;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.01;ReadPosRankSum=0.493;SOR=0.654 GT:AD:DP:GQ:PL 0/1:155,140:295:99:3571,0,4175 chr1 203071794 . G T 3108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.827;ClippingRankSum=0.000;DP=267;ExcessHet=3.0103;FS=0.472;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.64;ReadPosRankSum=0.567;SOR=0.754 GT:AD:DP:GQ:PL 0/1:144,123:267:99:3137,0,3949 chr1 203075467 . G A 446.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.346;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.41;ReadPosRankSum=-0.377;SOR=0.963 GT:AD:DP:GQ:PL 0/1:13,16:29:99:475,0,388 chr1 203075914 . T C 279.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.710;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.19;ReadPosRankSum=-0.407;SOR=0.093 GT:AD:DP:GQ:PL 0/1:15,10:25:99:308,0,548 chr1 203075969 . T C 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.56;ReadPosRankSum=0.799;SOR=0.269 GT:AD:DP:GQ:PL 0/1:8,4:12:99:131,0,286 chr1 203076285 . G T 1534.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.333;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=2.338;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.90;ReadPosRankSum=1.219;SOR=0.511 GT:AD:DP:GQ:PL 0/1:66,63:129:99:1563,0,1687 chr1 203076455 . T C 912.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.887;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.17;ReadPosRankSum=-1.435;SOR=0.820 GT:AD:DP:GQ:PL 0/1:41,34:75:99:941,0,1280 chr1 203084640 . T C 6728.77 PASS AC=2;AF=1.00;AN=2;DP=213;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.74;SOR=0.967 GT:AD:DP:GQ:PL 1/1:0,212:212:99:6757,636,0 chr1 203085395 . A T 723.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.47;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:752,54,0 chr1 203085973 . A G 7784.77 PASS AC=2;AF=1.00;AN=2;DP=244;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.90;SOR=1.552 GT:AD:DP:GQ:PL 1/1:0,244:244:99:7813,732,0 chr1 203129466 . G A 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.54;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 203142567 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 203150363 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 203154709 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 203166197 . A C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 203174267 . T C 791.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.208;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.747;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.94;ReadPosRankSum=-0.887;SOR=0.392 GT:AD:DP:GQ:PL 0/1:27,26:53:99:820,0,876 chr1 203174597 . G C 1365.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.318;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=6.198;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.53;ReadPosRankSum=-1.985;SOR=1.435 GT:AD:DP:GQ:PL 0/1:48,46:94:99:1394,0,1279 chr1 203175070 . T C 262.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.85;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:291,24,0 chr1 203178161 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 203179505 . A G 10221.77 PASS AC=2;AF=1.00;AN=2;DP=305;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.51;SOR=0.810 GT:AD:DP:GQ:PL 1/1:0,305:305:99:10250,916,0 chr1 203183049 . C T 578.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.187;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.12;ReadPosRankSum=-1.341;SOR=0.504 GT:AD:DP:GQ:PL 0/1:6,18:24:99:607,0,178 chr1 203183673 . T C 3558.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.700;ClippingRankSum=0.000;DP=251;ExcessHet=3.0103;FS=1.571;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.18;ReadPosRankSum=0.771;SOR=0.803 GT:AD:DP:GQ:PL 0/1:124,127:251:99:3587,0,3265 chr1 203184427 . C T 816.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.097;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.02;ReadPosRankSum=1.297;SOR=0.693 GT:AD:DP:GQ:PL 0/1:24,24:48:99:845,0,812 chr1 203184506 . C G 1998.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.130;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=3.244;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.15;ReadPosRankSum=-0.646;SOR=0.454 GT:AD:DP:GQ:PL 0/1:75,77:152:99:2027,0,2097 chr1 203185404 . A G 1988.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.835;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=2.761;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=-1.996;SOR=1.049 GT:AD:DP:GQ:PL 0/1:81,69:150:99:2017,0,2540 chr1 203186754 . G C 1801.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.30;SOR=3.398 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1830,147,0 chr1 203186952 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 203198743 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 203202985 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.11;ReadPosRankSum=0.328;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,4:7:70:78,0,70 chr1 203202986 . T G 242.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.69;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:271,21,0 chr1 203205542 . G C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 203205736 . T C 2483.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.094;ClippingRankSum=0.000;DP=172;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.44;ReadPosRankSum=-1.623;SOR=0.638 GT:AD:DP:GQ:PL 0/1:84,88:172:99:2512,0,2348 chr1 203205793 . A G 3434.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.119;ClippingRankSum=0.000;DP=297;ExcessHet=3.0103;FS=0.426;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.60;ReadPosRankSum=-0.766;SOR=0.655 GT:AD:DP:GQ:PL 0/1:152,144:296:99:3463,0,3766 chr1 203205979 . A C 3797.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.10;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3826,307,0 chr1 203214211 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 203218965 . G A 233.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.38;ReadPosRankSum=0.210;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,7:10:95:262,0,95 chr1 203219564 . A C 3327.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.66;SOR=1.735 GT:AD:DP:GQ:PL 1/1:0,96:96:99:3356,288,0 chr1 203222134 . C G 935.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.401;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.18;ReadPosRankSum=0.192;SOR=0.754 GT:AD:DP:GQ:PL 0/1:42,29:71:99:964,0,1472 chr1 203222792 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 203223009 . T C 2358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.487;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=0.676;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.94;ReadPosRankSum=-0.113;SOR=0.810 GT:AD:DP:GQ:PL 0/1:66,82:148:99:2387,0,1693 chr1 203223439 . G T 2609.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.724;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=7.228;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.21;ReadPosRankSum=-1.239;SOR=0.296 GT:AD:DP:GQ:PL 0/1:78,83:161:99:2638,0,2369 chr1 203223692 . C T 5023.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.943;ClippingRankSum=0.000;DP=369;ExcessHet=3.0103;FS=1.797;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.69;ReadPosRankSum=-1.155;SOR=0.590 GT:AD:DP:GQ:PL 0/1:180,187:367:99:5052,0,5006 chr1 203223921 . C T 90.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.08;ReadPosRankSum=-0.903;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:119,0,220 chr1 203224006 . T G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 203224880 . A G 955.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.61;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,26:26:78:984,78,0 chr1 203225058 . C T 2141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.153;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.40;ReadPosRankSum=0.155;SOR=0.731 GT:AD:DP:GQ:PL 0/1:121,85:206:99:2170,0,3375 chr1 203305408 . C A 460.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.16;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:489,36,0 chr1 203311166 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 203315101 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 203315227 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 203321118 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 203327700 . T C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 203342832 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 203346765 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 203348034 . C T 10606.77 PASS AC=2;AF=1.00;AN=2;DP=326;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.54;SOR=0.953 GT:AD:DP:GQ:PL 1/1:0,326:326:99:10635,973,0 chr1 203349603 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 203353312 . C A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.58;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 203353349 . T C 538.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.45;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:567,42,0 chr1 203353393 . G C 794.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.41;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,20:20:60:823,60,0 chr1 203359152 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 203387568 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 203408522 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 203409626 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 203427693 . C A 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 203429502 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 203496268 . T C 4228.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.717;ClippingRankSum=0.000;DP=278;ExcessHet=3.0103;FS=3.413;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.21;ReadPosRankSum=-0.449;SOR=0.912 GT:AD:DP:GQ:PL 0/1:125,153:278:99:4257,0,3097 chr1 203496442 . C G 491.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.600;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=2.732;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.49;ReadPosRankSum=1.559;SOR=2.187 GT:AD:DP:GQ:PL 0/1:9,15:24:99:520,0,267 chr1 203498105 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 203500528 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 203500726 . T A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 203503916 . T C 184.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.799;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.80;ReadPosRankSum=1.834;SOR=2.584 GT:AD:DP:GQ:PL 0/1:4,7:11:99:213,0,122 chr1 203580262 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 203606759 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 203608587 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 203608607 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 203619639 . G A 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=1.006;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,78 chr1 203645835 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 203654216 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 203654279 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 203657236 . C G 438.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.02;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:467,36,0 chr1 203664895 . G T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.41;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 203668397 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 203668425 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 203668478 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 203672004 . G C 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr1 203675081 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 203683316 . A G 7371.77 PASS AC=2;AF=1.00;AN=2;DP=245;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.46;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,242:242:99:7400,726,0 chr1 203683555 . C G 1028.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.89;SOR=6.439 GT:AD:DP:GQ:PL 1/1:0,24:24:72:1057,72,0 chr1 203683570 . T C 820.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.52;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:57:849,57,0 chr1 203698013 . T G 476.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.53;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:505,39,0 chr1 203698281 . T C 6600.77 PASS AC=2;AF=1.00;AN=2;DP=206;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.20;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,205:205:99:6629,615,0 chr1 203698408 . A G 2993.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.19;SOR=1.739 GT:AD:DP:GQ:PL 1/1:0,93:93:99:3022,279,0 chr1 203699971 . G A 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.80;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr1 203699972 . A T 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.81;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr1 203700243 . G A 2865.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.578;ClippingRankSum=0.000;DP=235;ExcessHet=3.0103;FS=2.207;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.19;ReadPosRankSum=0.943;SOR=0.830 GT:AD:DP:GQ:PL 0/1:123,112:235:99:2894,0,3335 chr1 203700558 . G A 65.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:93,9,0 chr1 203701000 . A T 1996.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.84;SOR=2.507 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2025,177,0 chr1 203701051 . A G 975.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.53;SOR=4.255 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1004,78,0 chr1 203710806 . A G 7864.77 PASS AC=2;AF=1.00;AN=2;DP=235;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.47;SOR=1.936 GT:AD:DP:GQ:PL 1/1:0,235:235:99:7893,706,0 chr1 203715544 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 203729251 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 203739906 . A G 377.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.75;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:406,30,0 chr1 203739940 . T C 138.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:166,12,0 chr1 203765103 . T G 92.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.286;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.15;ReadPosRankSum=0.000;SOR=0.602 GT:AD:DP:GQ:PL 0/1:13,5:18:99:121,0,386 chr1 203765857 . T C 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=0.000;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr1 203771330 . C A 915.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.130;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=2.802;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-1.360;SOR=1.270 GT:AD:DP:GQ:PL 0/1:33,23:56:99:944,0,1996 chr1 203771334 . G A 915.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.150;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=4.464;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.79;ReadPosRankSum=-1.532;SOR=1.410 GT:AD:DP:GQ:PL 0/1:33,25:58:99:944,0,1996 chr1 203771675 . G C 133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.849;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.427;SOR=1.022 GT:AD:DP:GQ:PL 0/1:9,5:14:99:162,0,299 chr1 203773787 . G A 439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.255;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.74;ReadPosRankSum=-0.892;SOR=0.990 GT:AD:DP:GQ:PL 0/1:16,16:32:99:468,0,449 chr1 203773994 . G A 3413.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.269;ClippingRankSum=0.000;DP=296;ExcessHet=3.0103;FS=3.168;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=-0.193;SOR=0.791 GT:AD:DP:GQ:PL 0/1:158,135:293:99:3442,0,4403 chr1 203774525 . C T 3513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.806;ClippingRankSum=0.000;DP=285;ExcessHet=3.0103;FS=2.583;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.33;ReadPosRankSum=-0.873;SOR=0.867 GT:AD:DP:GQ:PL 0/1:145,140:285:99:3542,0,3962 chr1 203780822 . C A 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr1 203793245 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 203799200 . T C 1457.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.732;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=1.689;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.51;ReadPosRankSum=-0.308;SOR=0.948 GT:AD:DP:GQ:PL 0/1:45,49:94:99:1486,0,1209 chr1 203800404 . G A 848.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.056;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.15;ReadPosRankSum=-1.758;SOR=0.610 GT:AD:DP:GQ:PL 0/1:28,32:60:99:877,0,819 chr1 203818572 . T C 1253.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.83;SOR=2.712 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1282,108,0 chr1 203829219 . G T 217.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.47;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:246,18,0 chr1 203831607 . G C 309.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.791;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=4.210;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.68;ReadPosRankSum=-1.431;SOR=0.080 GT:AD:DP:GQ:PL 0/1:18,11:29:99:338,0,658 chr1 203833888 . A G 2266.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.05;SOR=1.340 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2295,219,0 chr1 203849845 . C A 2978.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.083;ClippingRankSum=0.000;DP=266;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.20;ReadPosRankSum=0.136;SOR=0.681 GT:AD:DP:GQ:PL 0/1:153,113:266:99:3007,0,4352 chr1 203850049 . T C 1237.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.731;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=3.097;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.63;ReadPosRankSum=-1.065;SOR=0.416 GT:AD:DP:GQ:PL 0/1:57,41:98:99:1266,0,1698 chr1 203850312 . A C 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=-1.465;SOR=1.981 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr1 203852072 . G A 1914.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.81;SOR=2.345 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1943,165,0 chr1 203852186 . G A 2770.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.121;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=2.563;MLEAC=1;MLEAF=0.500;MQ=51.68;MQRankSum=0.637;QD=14.06;ReadPosRankSum=0.026;SOR=0.886 GT:AD:DP:GQ:PL 0/1:97,100:197:99:2799,0,2707 chr1 203861082 . T C 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr1 203863532 . G T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 203863983 . T C 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr1 203864047 . C T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 203872816 . G T 204.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.14;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:233,18,0 chr1 203873396 . C T 119.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.241;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.31;ReadPosRankSum=0.508;SOR=1.981 GT:AD:DP:GQ:PL 0/1:4,5:9:99:148,0,106 chr1 203873468 . A G 169.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.645;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.13;ReadPosRankSum=0.048;SOR=0.694 GT:AD:DP:GQ:PL 0/1:5,9:14:99:198,0,133 chr1 203874167 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 203954633 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 203954701 . A G 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.29;ReadPosRankSum=0.448;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,7:13:99:253,0,211 chr1 203959590 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 204024044 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.75;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:72,0,34 chr1 204028798 . G A 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr1 204031601 . G C 131.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:160,15,0 chr1 204031715 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 204036789 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 204036976 . T G 4181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.273;ClippingRankSum=0.000;DP=370;ExcessHet=3.0103;FS=2.551;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.33;ReadPosRankSum=0.908;SOR=0.548 GT:AD:DP:GQ:PL 0/1:206,163:369:99:4210,0,5636 chr1 204037410 . T C 2601.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.57;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2630,205,0 chr1 204037469 . G A 4230.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.12;SOR=1.850 GT:AD:DP:GQ:PL 1/1:0,124:124:99:4259,372,0 chr1 204041261 . G T 1480.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.45;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1509,126,0 chr1 204042185 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 204075438 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 204088727 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 204112395 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 204112764 . C T 2739.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.037;ClippingRankSum=0.000;DP=204;ExcessHet=3.0103;FS=0.513;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=-1.814;SOR=0.773 GT:AD:DP:GQ:PL 0/1:102,102:204:99:2768,0,2878 chr1 204112874 . C T 2637.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.155;ClippingRankSum=0.000;DP=204;ExcessHet=3.0103;FS=3.242;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.93;ReadPosRankSum=-0.788;SOR=0.483 GT:AD:DP:GQ:PL 0/1:114,90:204:99:2666,0,3270 chr1 204113195 . C T 1079.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.527;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=2.759;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.60;ReadPosRankSum=-2.246;SOR=0.259 GT:AD:DP:GQ:PL 0/1:18,32:50:99:1108,0,601 chr1 204116481 . A G 3737.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.455;ClippingRankSum=0.000;DP=319;ExcessHet=3.0103;FS=3.022;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.72;ReadPosRankSum=-0.204;SOR=0.740 GT:AD:DP:GQ:PL 0/1:180,139:319:99:3766,0,4738 chr1 204122117 . G A 865.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.078;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=2.775;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.32;ReadPosRankSum=1.559;SOR=1.306 GT:AD:DP:GQ:PL 0/1:19,31:50:99:894,0,597 chr1 204123445 . T C 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr1 204125774 . T C 1991.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.68;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,50:50:99:2020,150,0 chr1 204127502 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 204134312 . A G 167.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.58;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:196,15,0 chr1 204141206 . A G 5469.77 PASS AC=2;AF=1.00;AN=2;DP=158;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.62;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,158:158:99:5498,475,0 chr1 204141419 . C T 6793.77 PASS AC=2;AF=1.00;AN=2;DP=212;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.20;SOR=1.822 GT:AD:DP:GQ:PL 1/1:0,211:211:99:6822,632,0 chr1 204141532 . C T 1435.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.28;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1464,111,0 chr1 204146420 . C T 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.221;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=-1.611;SOR=0.160 GT:AD:DP:GQ:PL 0/1:5,5:10:99:145,0,179 chr1 204146458 . G C 898.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.89;SOR=4.892 GT:AD:DP:GQ:PL 1/1:0,23:23:69:927,69,0 chr1 204146806 . C T 4544.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.212;ClippingRankSum=0.000;DP=353;ExcessHet=3.0103;FS=1.253;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.87;ReadPosRankSum=0.318;SOR=0.616 GT:AD:DP:GQ:PL 0/1:175,178:353:99:4573,0,4683 chr1 204155965 . C T 800.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.071;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=2.333;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.44;ReadPosRankSum=-0.393;SOR=1.064 GT:AD:DP:GQ:PL 0/1:42,28:70:99:829,0,1358 chr1 204157035 . C T 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-0.623;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 204159726 . T G 303.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.717;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.87;ReadPosRankSum=-0.529;SOR=1.112 GT:AD:DP:GQ:PL 0/1:7,10:17:99:332,0,242 chr1 204160543 . A C 3096.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.422;ClippingRankSum=0.000;DP=236;ExcessHet=3.0103;FS=2.315;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.12;ReadPosRankSum=0.337;SOR=0.545 GT:AD:DP:GQ:PL 0/1:120,116:236:99:3125,0,3163 chr1 204161248 . G C 3518.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.711;ClippingRankSum=0.000;DP=268;ExcessHet=3.0103;FS=1.569;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.18;ReadPosRankSum=0.562;SOR=0.596 GT:AD:DP:GQ:PL 0/1:132,135:267:99:3547,0,3584 chr1 204190659 . G C 1644.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.258;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=7.636;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=0.321;SOR=1.430 GT:AD:DP:GQ:PL 0/1:48,62:110:99:1673,0,1362 chr1 204193084 . T C 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.180;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 204193102 . T C 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=1.282;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr1 204226144 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 204227879 . T A 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.674;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 204227920 . C T 170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.876;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.52;ReadPosRankSum=-0.955;SOR=0.132 GT:AD:DP:GQ:PL 0/1:3,8:11:92:199,0,92 chr1 204228497 . C T 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=1.068;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr1 204228529 . C T 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.010;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=0.480;SOR=1.911 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,224 chr1 204229081 . A G 385.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.377;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=1.485;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.29;ReadPosRankSum=-0.059;SOR=1.035 GT:AD:DP:GQ:PL 0/1:11,16:27:99:414,0,276 chr1 204230486 . C T 1501.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.235;ClippingRankSum=0.000;DP=143;ExcessHet=3.0103;FS=2.271;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.58;ReadPosRankSum=0.229;SOR=0.908 GT:AD:DP:GQ:PL 0/1:84,58:142:99:1530,0,2280 chr1 204230882 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 204241622 . C A 2269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.895;ClippingRankSum=0.000;DP=148;ExcessHet=3.0103;FS=5.187;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.34;ReadPosRankSum=0.857;SOR=0.395 GT:AD:DP:GQ:PL 0/1:70,78:148:99:2298,0,2102 chr1 204241663 . G A 2114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.655;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=0.687;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.33;ReadPosRankSum=0.214;SOR=0.577 GT:AD:DP:GQ:PL 0/1:50,72:122:99:2143,0,1568 chr1 204244586 . G C 347.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.84;ReadPosRankSum=-1.082;SOR=1.765 GT:AD:DP:GQ:PL 0/1:4,10:14:99:376,0,125 chr1 204247282 . C T 5357.77 PASS AC=2;AF=1.00;AN=2;DP=163;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.87;SOR=1.442 GT:AD:DP:GQ:PL 1/1:0,163:163:99:5386,488,0 chr1 204247340 . C T 7038.77 PASS AC=2;AF=1.00;AN=2;DP=225;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.28;SOR=1.028 GT:AD:DP:GQ:PL 1/1:0,225:225:99:7067,673,0 chr1 204247473 . G A 5370.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=0.457;ClippingRankSum=0.000;DP=203;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=27.26;ReadPosRankSum=1.113;SOR=0.601 GT:AD:DP:GQ:PL 1/1:3,194:197:99:5399,491,0 chr1 204247634 . C T 1801.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.65;SOR=2.393 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1830,156,0 chr1 204249505 . G C 3237.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.38;SOR=1.921 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3266,291,0 chr1 204249586 . T C 1220.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.53;SOR=5.486 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1249,93,0 chr1 204250431 . T G 1799.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.60;SOR=7.614 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1828,132,0 chr1 204250722 . G A 5894.77 PASS AC=2;AF=1.00;AN=2;DP=178;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.12;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,178:178:99:5923,534,0 chr1 204251904 . C T 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr1 204258037 . C T 544.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.30;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:573,42,0 chr1 204261453 . G A 2333.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.34;SOR=1.712 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2362,210,0 chr1 204265094 . T C,A 7283.77 PASS AC=1,1;AF=0.500,0.500;AN=2;DP=176;ExcessHet=3.0103;FS=0.000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=60.00;QD=29.59;SOR=1.356 GT:AD:DP:GQ:PL 1/2:0,93,83:176:99:7312,3481,3323,3861,0,3751 chr1 204265097 . G A 3168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.753;ClippingRankSum=0.000;DP=172;ExcessHet=3.0103;FS=0.584;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.42;ReadPosRankSum=1.278;SOR=0.602 GT:AD:DP:GQ:PL 0/1:90,82:172:99:3197,0,3604 chr1 204267232 . G A 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr1 204267249 . A G 513.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.14;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:542,39,0 chr1 204268288 . C T 10970.77 PASS AC=2;AF=1.00;AN=2;DP=342;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.08;SOR=0.998 GT:AD:DP:GQ:PL 1/1:0,342:342:99:10999,1026,0 chr1 204273603 . C A 2055.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.511;ClippingRankSum=0.000;DP=155;ExcessHet=3.0103;FS=2.228;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=-0.055;SOR=0.496 GT:AD:DP:GQ:PL 0/1:77,78:155:99:2084,0,2210 chr1 204273710 . A C 3400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.240;ClippingRankSum=0.000;DP=269;ExcessHet=3.0103;FS=4.044;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.64;ReadPosRankSum=0.639;SOR=0.643 GT:AD:DP:GQ:PL 0/1:134,135:269:99:3429,0,3548 chr1 204273996 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 204275602 . C A 104.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:132,9,0 chr1 204275619 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 204314068 . A T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 204319923 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 204345091 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 204345598 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 204346954 . C T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.90;QD=31.58;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 204358766 . G A 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 204359613 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 204402619 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 204410404 . T C 2094.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.027;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=0.597;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=-1.833;SOR=0.605 GT:AD:DP:GQ:PL 0/1:83,74:157:99:2123,0,2441 chr1 204412163 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 204440153 . C G 7928.77 PASS AC=2;AF=1.00;AN=2;DP=222;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.52;SOR=2.865 GT:AD:DP:GQ:PL 1/1:0,221:221:99:7957,664,0 chr1 204441319 . A G 681.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.61;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:710,51,0 chr1 204441733 . T C 707.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.34;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:736,54,0 chr1 204442977 . A G 137.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:165,12,0 chr1 204444169 . C T 10856.77 PASS AC=2;AF=1.00;AN=2;DP=243;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.47;SOR=0.939 GT:AD:DP:GQ:PL 1/1:0,243:243:99:10885,734,0 chr1 204444171 . G A 10856.77 PASS AC=2;AF=1.00;AN=2;DP=238;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.14;SOR=0.894 GT:AD:DP:GQ:PL 1/1:0,238:238:99:10885,734,0 chr1 204444612 . C T 148.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.96;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:176,12,0 chr1 204444620 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.35;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 204445654 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 204446886 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 204449070 . T C 2010.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.10;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,54:54:99:2039,162,0 chr1 204449517 . C T 681.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.21;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:710,51,0 chr1 204449761 . C T 837.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.91;SOR=2.925 GT:AD:DP:GQ:PL 1/1:0,24:24:72:866,72,0 chr1 204449811 . C T 1763.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.99;SOR=2.701 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1792,150,0 chr1 204450939 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 204456303 . C T 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.88;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 204456333 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.75;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 204456924 . A C 1115.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.647;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.33;ReadPosRankSum=1.001;SOR=2.985 GT:AD:DP:GQ:PL 1/1:1,27:28:61:1144,61,0 chr1 204460084 . A T 2111.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.19;SOR=1.514 GT:AD:DP:GQ:PL 1/1:0,47:47:99:2140,144,0 chr1 204460085 . T G 2111.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.99;SOR=1.659 GT:AD:DP:GQ:PL 1/1:0,47:47:99:2140,144,0 chr1 204460087 . T A 2086.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.19;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,46:46:99:2115,141,0 chr1 204460088 . A G 2041.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.68;SOR=1.559 GT:AD:DP:GQ:PL 1/1:0,45:45:99:2070,138,0 chr1 204460157 . A G 1022.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.20;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1051,84,0 chr1 204460710 . C G 13937.77 PASS AC=2;AF=1.00;AN=2;DP=434;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.19;SOR=1.192 GT:AD:DP:GQ:PL 1/1:0,433:433:99:13966,1299,0 chr1 204461066 . A G 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr1 204463965 . A C 6298.77 PASS AC=2;AF=1.00;AN=2;DP=173;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.55;SOR=2.901 GT:AD:DP:GQ:PL 1/1:0,173:173:99:6327,520,0 chr1 204465149 . T C 354.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.56;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,12:12:36:383,36,0 chr1 204468631 . C G 765.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.64;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,19:19:57:794,57,0 chr1 204469206 . C T 9015.77 PASS AC=2;AF=1.00;AN=2;DP=279;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,278:278:99:9044,834,0 chr1 204469515 . G T 12874.77 PASS AC=2;AF=1.00;AN=2;DP=407;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.63;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,407:407:99:12903,1218,0 chr1 204475907 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 204496356 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 204512081 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 204536979 . C T 1414.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.68;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1443,126,0 chr1 204542796 . T C 1273.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.959;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.90;ReadPosRankSum=1.250;SOR=0.744 GT:AD:DP:GQ:PL 0/1:56,51:107:99:1302,0,1559 chr1 204542972 . T C 2622.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.63;SOR=2.690 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2651,234,0 chr1 204543067 . A T 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.24;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr1 204546735 . C T 776.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.78;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,21:21:63:805,63,0 chr1 204546897 . A G 2691.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.67;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2720,254,0 chr1 204549714 . C A 1975.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.66;SOR=1.342 GT:AD:DP:GQ:PL 1/1:0,57:57:99:2004,171,0 chr1 204550020 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 204555346 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 204579288 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 204580368 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 204587350 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 204587830 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 204617677 . G A 1441.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.10;SOR=3.003 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1470,123,0 chr1 204618112 . G A 5133.77 PASS AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.00;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,151:151:99:5162,454,0 chr1 204620916 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 204624760 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 204656145 . A G 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 204656212 . C G 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=1.282;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr1 204676377 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 204682199 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 204706049 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 204711362 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 204735121 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 204798704 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 204828864 . G C 277.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.290;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.42;ReadPosRankSum=-1.803;SOR=0.859 GT:AD:DP:GQ:PL 0/1:18,15:33:99:306,0,448 chr1 204828979 . G A 168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.932;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.55;ReadPosRankSum=-1.589;SOR=0.495 GT:AD:DP:GQ:PL 0/1:9,7:16:99:197,0,201 chr1 204842990 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 204873160 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 204923375 . C T 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=-0.084;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,115 chr1 204943973 . G T 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.43;ReadPosRankSum=-0.329;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:253,0,134 chr1 204944230 . G T 1548.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.059;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=4.297;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.91;ReadPosRankSum=1.281;SOR=1.102 GT:AD:DP:GQ:PL 0/1:63,67:130:99:1577,0,1837 chr1 204944524 . A G 63.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.660;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.80;ReadPosRankSum=-1.097;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,3:11:92:92,0,267 chr1 204946265 . A G 2978.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.278;ClippingRankSum=0.000;DP=231;ExcessHet=3.0103;FS=1.020;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.90;ReadPosRankSum=1.280;SOR=0.786 GT:AD:DP:GQ:PL 0/1:116,115:231:99:3007,0,3071 chr1 204946776 . A G 480.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.112;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=8.468;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.90;ReadPosRankSum=-1.468;SOR=3.486 GT:AD:DP:GQ:PL 0/1:9,14:23:99:509,0,227 chr1 204946792 . T C 326.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.526;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=7.375;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.15;ReadPosRankSum=-1.693;SOR=3.145 GT:AD:DP:GQ:PL 0/1:8,10:18:99:355,0,212 chr1 204950104 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 204952130 . A G 3527.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.532;ClippingRankSum=0.000;DP=261;ExcessHet=3.0103;FS=0.454;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.57;ReadPosRankSum=0.997;SOR=0.741 GT:AD:DP:GQ:PL 0/1:126,134:260:99:3556,0,3367 chr1 204952403 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 204954431 . G A 2949.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.902;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=3.465;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.97;ReadPosRankSum=0.306;SOR=0.980 GT:AD:DP:GQ:PL 0/1:93,104:197:99:2978,0,2405 chr1 204973035 . C T 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=-0.703;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr1 204973851 . G A 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 204973905 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.00;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 204973988 . G A 193.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.349;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.15;ReadPosRankSum=-0.322;SOR=1.085 GT:AD:DP:GQ:PL 0/1:5,7:12:99:222,0,139 chr1 204973993 . C T 586.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.87;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,15:15:45:615,45,0 chr1 204974157 . A T 3567.77 PASS AC=2;AF=1.00;AN=2;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.73;SOR=1.365 GT:AD:DP:GQ:PL 1/1:0,109:109:99:3596,326,0 chr1 204974819 . C A 2894.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.430;ClippingRankSum=0.000;DP=204;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.26;ReadPosRankSum=0.533;SOR=0.699 GT:AD:DP:GQ:PL 0/1:89,114:203:99:2923,0,2588 chr1 204974863 . C T 2627.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.304;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=4.077;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.74;ReadPosRankSum=0.274;SOR=1.061 GT:AD:DP:GQ:PL 0/1:63,94:157:99:2656,0,1749 chr1 204974864 . A G 6253.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.900;ClippingRankSum=0.000;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=24.53;ReadPosRankSum=1.766;SOR=0.628 GT:AD:DP:GQ:PL 1/1:1,153:154:99:6282,429,0 chr1 204976490 . G A 3985.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.322;ClippingRankSum=0.000;DP=344;ExcessHet=3.0103;FS=0.394;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=-0.029;SOR=0.733 GT:AD:DP:GQ:PL 0/1:188,156:344:99:4014,0,5286 chr1 204980639 . T C 217.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.55;ReadPosRankSum=-0.154;SOR=0.693 GT:AD:DP:GQ:PL 0/1:7,7:14:99:246,0,233 chr1 204982081 . C T 4006.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.050;ClippingRankSum=0.000;DP=249;ExcessHet=3.0103;FS=3.957;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.09;ReadPosRankSum=-0.682;SOR=0.466 GT:AD:DP:GQ:PL 0/1:103,146:249:99:4035,0,2873 chr1 204983721 . C A 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.524;SOR=3.258 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 204985865 . A G 1063.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.417;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=6.240;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.16;ReadPosRankSum=2.742;SOR=3.020 GT:AD:DP:GQ:PL 0/1:31,31:62:99:1092,0,1025 chr1 204986191 . G A 1387.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.033;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.16;ReadPosRankSum=-0.900;SOR=0.703 GT:AD:DP:GQ:PL 0/1:59,39:98:99:1416,0,3888 chr1 204986201 . A G 1188.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.944;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.32;ReadPosRankSum=-0.824;SOR=0.528 GT:AD:DP:GQ:PL 0/1:52,31:83:99:1217,0,3729 chr1 204986288 . G A 135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.05;ReadPosRankSum=-0.630;SOR=0.260 GT:AD:DP:GQ:PL 0/1:10,5:15:99:164,0,373 chr1 204993532 . G A 166.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.366;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.83;ReadPosRankSum=-0.566;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,6:7:21:195,0,21 chr1 204993590 . A G 1031.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.27;SOR=4.332 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1060,81,0 chr1 204996396 . T C 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 204996529 . A G 135.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:163,12,0 chr1 204997042 . T C 1372.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.07;SOR=3.797 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1401,108,0 chr1 204997562 . G A 2899.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.52;SOR=2.038 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2928,252,0 chr1 204997621 . A G 1751.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.07;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1780,150,0 chr1 205001115 . A G 1024.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.522;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=4.179;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.67;ReadPosRankSum=-0.267;SOR=1.149 GT:AD:DP:GQ:PL 0/1:68,38:106:99:1053,0,1810 chr1 205001174 . T C 1828.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.001;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=1.151;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.33;ReadPosRankSum=-1.701;SOR=0.604 GT:AD:DP:GQ:PL 0/1:114,82:196:99:1857,0,3011 chr1 205001367 . C A 521.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.063;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.10;ReadPosRankSum=1.106;SOR=0.616 GT:AD:DP:GQ:PL 0/1:28,19:47:99:550,0,960 chr1 205002285 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 205002324 . A G 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.652;SOR=0.086 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 205002357 . C A 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.608;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 205002425 . A G 504.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.939;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.70;ReadPosRankSum=-0.887;SOR=0.941 GT:AD:DP:GQ:PL 0/1:12,15:27:99:533,0,386 chr1 205008599 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205009405 . A G 3281.77 PASS AC=2;AF=1.00;AN=2;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.49;SOR=1.935 GT:AD:DP:GQ:PL 1/1:0,101:101:99:3310,301,0 chr1 205043609 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205045802 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 205054636 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 205055729 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205058433 . G T 636.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.552;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=4.256;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.25;ReadPosRankSum=1.354;SOR=0.293 GT:AD:DP:GQ:PL 0/1:31,21:52:99:665,0,1027 chr1 205058609 . G A 2253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.864;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.50;ReadPosRankSum=-0.882;SOR=0.701 GT:AD:DP:GQ:PL 0/1:106,90:196:99:2282,0,2909 chr1 205059787 . C T 129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.63;ReadPosRankSum=1.532;SOR=0.193 GT:AD:DP:GQ:PL 0/1:12,5:17:99:158,0,450 chr1 205061988 . C T 2678.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.404;ClippingRankSum=0.000;DP=210;ExcessHet=3.0103;FS=10.146;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=-0.995;SOR=0.646 GT:AD:DP:GQ:PL 0/1:112,98:210:99:2707,0,3025 chr1 205062321 . A G 1522.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.51;SOR=3.145 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1551,114,0 chr1 205064155 . G A 483.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.494;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.23;ReadPosRankSum=1.337;SOR=1.345 GT:AD:DP:GQ:PL 0/1:19,15:34:99:512,0,645 chr1 205064246 . T C 1737.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.875;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.27;ReadPosRankSum=0.439;SOR=0.743 GT:AD:DP:GQ:PL 0/1:63,68:131:99:1766,0,1535 chr1 205065306 . G T 2659.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.038;ClippingRankSum=0.000;DP=192;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.85;ReadPosRankSum=0.541;SOR=0.744 GT:AD:DP:GQ:PL 0/1:98,94:192:99:2688,0,2953 chr1 205065360 . A G 1207.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.610;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=5.617;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=-0.068;SOR=1.480 GT:AD:DP:GQ:PL 0/1:48,39:87:99:1236,0,1364 chr1 205065424 . C T 499.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.718;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.62;ReadPosRankSum=-1.583;SOR=1.514 GT:AD:DP:GQ:PL 0/1:17,15:32:99:528,0,568 chr1 205065595 . C T 236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.31;ReadPosRankSum=-0.282;SOR=2.093 GT:AD:DP:GQ:PL 0/1:2,7:9:56:265,0,56 chr1 205066327 . A G 2315.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.98;SOR=5.856 GT:AD:DP:GQ:PL 1/1:0,57:57:99:2344,172,0 chr1 205069603 . C T 1418.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.654;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=2.872;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.33;ReadPosRankSum=0.174;SOR=0.441 GT:AD:DP:GQ:PL 0/1:45,54:99:99:1447,0,1207 chr1 205070160 . T C 2115.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.029;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=10.508;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.34;ReadPosRankSum=0.766;SOR=1.835 GT:AD:DP:GQ:PL 0/1:57,65:122:99:2144,0,1665 chr1 205071598 . A G 237.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:266,24,0 chr1 205071707 . A G 871.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=1.697 GT:AD:DP:GQ:PL 1/1:0,26:26:78:900,78,0 chr1 205071815 . C G 470.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.108;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.92;ReadPosRankSum=-0.733;SOR=0.602 GT:AD:DP:GQ:PL 0/1:46,22:68:99:499,0,1377 chr1 205071887 . G A 1349.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.838;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=1.565;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.64;ReadPosRankSum=1.870;SOR=0.924 GT:AD:DP:GQ:PL 0/1:65,51:116:99:1378,0,1911 chr1 205072030 . C T 2284.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.058;ClippingRankSum=0.000;DP=188;ExcessHet=3.0103;FS=7.410;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.15;ReadPosRankSum=-0.386;SOR=1.184 GT:AD:DP:GQ:PL 0/1:96,92:188:99:2313,0,2440 chr1 205072337 . T C 168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.911;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=0.753;SOR=0.412 GT:AD:DP:GQ:PL 0/1:8,6:14:99:197,0,212 chr1 205072352 . C T 335.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.163;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.67;ReadPosRankSum=0.413;SOR=0.527 GT:AD:DP:GQ:PL 0/1:8,11:19:99:364,0,269 chr1 205072824 . C T 236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=6.532;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.31;ReadPosRankSum=-0.282;SOR=4.174 GT:AD:DP:GQ:PL 0/1:2,7:9:56:265,0,56 chr1 205083811 . G A 5680.77 PASS AC=2;AF=1.00;AN=2;DP=175;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.65;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,174:174:99:5709,521,0 chr1 205084091 . C T 10955.77 PASS AC=2;AF=1.00;AN=2;DP=323;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.92;SOR=1.144 GT:AD:DP:GQ:PL 1/1:0,323:323:99:10984,969,0 chr1 205090154 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 205094821 . C T 365.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.092;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.55;ReadPosRankSum=0.466;SOR=0.616 GT:AD:DP:GQ:PL 0/1:14,13:27:99:394,0,435 chr1 205095312 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205096605 . G T 1247.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.643;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=4.881;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.27;ReadPosRankSum=-0.720;SOR=1.345 GT:AD:DP:GQ:PL 0/1:48,46:94:99:1276,0,1468 chr1 205100276 . G A 934.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.632;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=0.800;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.16;ReadPosRankSum=0.238;SOR=0.538 GT:AD:DP:GQ:PL 0/1:61,41:102:99:963,0,1623 chr1 205101394 . C T 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=1.210;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,179 chr1 205101445 . G A 468.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.16;ReadPosRankSum=1.221;SOR=0.631 GT:AD:DP:GQ:PL 0/1:15,14:29:99:497,0,539 chr1 205104890 . T C 883.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.79;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:63:912,63,0 chr1 205104891 . G A 405.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.44;ReadPosRankSum=0.889;SOR=0.874 GT:AD:DP:GQ:PL 0/1:10,12:22:99:434,0,347 chr1 205105296 . C T 445.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.245;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.26;ReadPosRankSum=-0.321;SOR=1.085 GT:AD:DP:GQ:PL 0/1:9,13:22:99:474,0,271 chr1 205113197 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 205114737 . T C 270.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.636;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.67;ReadPosRankSum=0.788;SOR=0.446 GT:AD:DP:GQ:PL 0/1:18,10:28:99:299,0,574 chr1 205114992 . G A 376.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.237;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=1.631;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.18;ReadPosRankSum=0.140;SOR=1.055 GT:AD:DP:GQ:PL 0/1:23,14:37:99:405,0,655 chr1 205121757 . C G 2219.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.736;ClippingRankSum=0.000;DP=164;ExcessHet=3.0103;FS=1.987;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.54;ReadPosRankSum=1.097;SOR=0.859 GT:AD:DP:GQ:PL 0/1:78,86:164:99:2248,0,2060 chr1 205121977 . G C 961.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.126;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=3.959;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.94;ReadPosRankSum=1.746;SOR=0.320 GT:AD:DP:GQ:PL 0/1:33,36:69:99:990,0,967 chr1 205147507 . A T 1816.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.830;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=3.481;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.27;ReadPosRankSum=-0.331;SOR=1.040 GT:AD:DP:GQ:PL 0/1:55,64:119:99:1845,0,1478 chr1 205150453 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:73:78,0,73 chr1 205150853 . C T 3741.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.191;ClippingRankSum=0.000;DP=279;ExcessHet=3.0103;FS=0.447;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.46;ReadPosRankSum=-0.177;SOR=0.748 GT:AD:DP:GQ:PL 0/1:138,140:278:99:3770,0,3672 chr1 205161285 . A G 3802.77 PASS AC=2;AF=1.00;AN=2;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.23;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,118:118:99:3831,354,0 chr1 205174242 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 205187972 . T C 992.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.98;SOR=4.003 GT:AD:DP:GQ:PL 1/1:0,23:23:69:1021,69,0 chr1 205187980 . A G 910.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.01;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,21:21:63:939,63,0 chr1 205235011 . A G 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-1.036;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 205241287 . G T 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.46;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 205256157 . G A 412.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.725;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=8.316;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.64;ReadPosRankSum=0.741;SOR=3.467 GT:AD:DP:GQ:PL 0/1:8,12:20:99:441,0,206 chr1 205256329 . G A 2851.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.900;ClippingRankSum=0.000;DP=215;ExcessHet=3.0103;FS=8.615;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=-0.051;SOR=1.249 GT:AD:DP:GQ:PL 0/1:115,100:215:99:2880,0,3135 chr1 205263171 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 205263319 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205263852 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205269147 . A G 5421.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.839;ClippingRankSum=0.000;DP=415;ExcessHet=3.0103;FS=4.054;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=-0.835;SOR=0.702 GT:AD:DP:GQ:PL 0/1:216,198:414:99:5450,0,6212 chr1 205269402 . C T 2494.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.498;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=0.588;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=1.076;SOR=0.616 GT:AD:DP:GQ:PL 0/1:75,85:160:99:2523,0,2244 chr1 205269903 . C G 1871.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.734;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.28;ReadPosRankSum=2.030;SOR=0.732 GT:AD:DP:GQ:PL 0/1:54,61:115:99:1900,0,1592 chr1 205269993 . C G 1303.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.22;SOR=4.112 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1332,99,0 chr1 205271013 . G T 1858.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.996;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=4.532;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.18;ReadPosRankSum=-0.314;SOR=1.160 GT:AD:DP:GQ:PL 0/1:89,52:141:99:1887,0,5362 chr1 205271017 . A G 1875.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.684;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=4.387;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=0.342;SOR=1.101 GT:AD:DP:GQ:PL 0/1:92,54:146:99:1904,0,5394 chr1 205271123 . C T 2667.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.655;ClippingRankSum=0.000;DP=224;ExcessHet=3.0103;FS=2.951;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.91;ReadPosRankSum=-0.489;SOR=0.753 GT:AD:DP:GQ:PL 0/1:118,106:224:99:2696,0,3438 chr1 205271531 . T A 355.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.989;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=4.523;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.93;ReadPosRankSum=-0.957;SOR=2.833 GT:AD:DP:GQ:PL 0/1:6,11:17:99:384,0,199 chr1 205271785 . A G 1228.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.635;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=33.21;ReadPosRankSum=-0.411;SOR=1.085 GT:AD:DP:GQ:PL 1/1:1,36:37:69:1257,69,0 chr1 205292746 . G C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 205296462 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205296534 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 205303798 . C T 1626.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.807;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=0.586;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.80;ReadPosRankSum=2.230;SOR=0.600 GT:AD:DP:GQ:PL 0/1:100,66:166:99:1655,0,2924 chr1 205303855 . C G 2500.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.236;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.08;ReadPosRankSum=-0.063;SOR=0.718 GT:AD:DP:GQ:PL 0/1:114,93:207:99:2529,0,3218 chr1 205305046 . A G 2140.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.03;SOR=3.990 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2169,168,0 chr1 205305547 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 205305933 . C T 65.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.769;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=5.119;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.06;ReadPosRankSum=0.312;SOR=0.039 GT:AD:DP:GQ:PL 0/1:9,4:13:94:94,0,337 chr1 205306078 . A T 4246.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.49;SOR=2.135 GT:AD:DP:GQ:PL 1/1:0,95:95:99:4275,286,0 chr1 205306079 . G T 4246.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.63;SOR=2.135 GT:AD:DP:GQ:PL 1/1:0,95:95:99:4275,286,0 chr1 205306293 . A G 6332.77 PASS AC=2;AF=1.00;AN=2;DP=193;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.81;SOR=1.467 GT:AD:DP:GQ:PL 1/1:0,193:193:99:6361,580,0 chr1 205321666 . G A 1349.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.447;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.00;ReadPosRankSum=-0.424;SOR=0.716 GT:AD:DP:GQ:PL 0/1:38,52:90:99:1378,0,964 chr1 205321837 . C T 432.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.183;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=5.012;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.466;SOR=0.223 GT:AD:DP:GQ:PL 0/1:22,18:40:99:461,0,662 chr1 205329311 . A C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 205337317 . C T 60.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.06;ReadPosRankSum=0.259;SOR=0.148 GT:AD:DP:GQ:PL 0/1:9,3:12:89:89,0,333 chr1 205338661 . G A 1688.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.534;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=3.270;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.51;ReadPosRankSum=-0.225;SOR=0.442 GT:AD:DP:GQ:PL 0/1:67,68:135:99:1717,0,1845 chr1 205339207 . G A 3370.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.159;ClippingRankSum=0.000;DP=229;ExcessHet=3.0103;FS=3.074;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.72;ReadPosRankSum=-0.557;SOR=0.471 GT:AD:DP:GQ:PL 0/1:113,116:229:99:3399,0,3554 chr1 205339240 . C T 5372.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.105;ClippingRankSum=0.000;DP=387;ExcessHet=3.0103;FS=0.835;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=-0.540;SOR=0.636 GT:AD:DP:GQ:PL 0/1:186,201:387:99:5401,0,5086 chr1 205339463 . C T 4776.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.175;ClippingRankSum=0.000;DP=310;ExcessHet=3.0103;FS=0.456;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.41;ReadPosRankSum=1.303;SOR=0.656 GT:AD:DP:GQ:PL 0/1:145,165:310:99:4805,0,4226 chr1 205340083 . T C 158.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.68;ReadPosRankSum=0.180;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:187,0,62 chr1 205341807 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205341851 . A G 73.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:101,12,0 chr1 205341938 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.674;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 205341993 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205343152 . C G 2781.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.43;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2810,220,0 chr1 205343720 . G A 256.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.457;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=3.245;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.51;ReadPosRankSum=-0.949;SOR=0.155 GT:AD:DP:GQ:PL 0/1:10,9:19:99:285,0,361 chr1 205344519 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205344793 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205349396 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205349726 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 205356481 . C A 6452.77 PASS AC=2;AF=1.00;AN=2;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.15;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,214:214:99:6481,642,0 chr1 205358109 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 205358289 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 205358388 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205363401 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 205384087 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 205384364 . A C 1983.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.154;ClippingRankSum=0.000;DP=154;ExcessHet=3.0103;FS=0.606;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=-0.249;SOR=0.782 GT:AD:DP:GQ:PL 0/1:75,79:154:99:2012,0,1772 chr1 205400203 . G A 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 205416370 . C T 1166.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.139;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=2.215;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.27;ReadPosRankSum=-0.323;SOR=0.518 GT:AD:DP:GQ:PL 0/1:91,50:141:99:1195,0,2560 chr1 205417364 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 205433430 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205451010 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 205473066 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 205492334 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205492407 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 205492435 . T C 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr1 205523628 . A G 5446.77 PASS AC=2;AF=1.00;AN=2;DP=152;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.62;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,152:152:99:5475,456,0 chr1 205526264 . A G 10957.77 PASS AC=2;AF=1.00;AN=2;DP=308;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.72;SOR=1.053 GT:AD:DP:GQ:PL 1/1:0,308:308:99:10986,925,0 chr1 205528893 . T C 460.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.898;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.60;ReadPosRankSum=0.254;SOR=0.859 GT:AD:DP:GQ:PL 0/1:3,15:18:72:489,0,72 chr1 205530449 . C G 2365.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.121;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.51;ReadPosRankSum=-1.509;SOR=0.657 GT:AD:DP:GQ:PL 0/1:81,82:163:99:2394,0,2256 chr1 205530532 . C T 1354.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.709;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.838;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.75;ReadPosRankSum=1.545;SOR=0.846 GT:AD:DP:GQ:PL 0/1:41,45:86:99:1383,0,1352 chr1 205531415 . T C 6511.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.101;ClippingRankSum=0.000;DP=449;ExcessHet=3.0103;FS=0.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.50;ReadPosRankSum=-0.845;SOR=0.652 GT:AD:DP:GQ:PL 0/1:202,247:449:99:6540,0,4914 chr1 205542620 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 205569457 . A G 80.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0 chr1 205571046 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 205571047 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 205575222 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 205580431 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 205584957 . G C 4573.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.298;ClippingRankSum=0.000;DP=278;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.51;ReadPosRankSum=0.718;SOR=0.708 GT:AD:DP:GQ:PL 0/1:153,124:277:99:4602,0,8903 chr1 205584967 . A C 4642.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.713;ClippingRankSum=0.000;DP=277;ExcessHet=3.0103;FS=0.934;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-0.174;SOR=0.765 GT:AD:DP:GQ:PL 0/1:151,125:276:99:4671,0,8835 chr1 205586017 . G A 607.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.297;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.478;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.36;ReadPosRankSum=0.084;SOR=0.458 GT:AD:DP:GQ:PL 0/1:14,21:35:99:636,0,377 chr1 205589274 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 205592244 . C T 1930.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.523;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=2.999;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.60;ReadPosRankSum=-1.663;SOR=0.952 GT:AD:DP:GQ:PL 0/1:64,78:142:99:1959,0,1613 chr1 205592383 . T A 1176.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.96;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,31:31:92:1205,92,0 chr1 205597419 . C T 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-1.282;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr1 205599314 . G A 816.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.246;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=2.392;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=0.536;SOR=0.397 GT:AD:DP:GQ:PL 0/1:31,33:64:99:845,0,932 chr1 205600062 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205631525 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 205640544 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 205642549 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 205642575 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 205646439 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 205646466 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 205646663 . A G 5630.77 PASS AC=2;AF=1.00;AN=2;DP=179;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.46;SOR=1.544 GT:AD:DP:GQ:PL 1/1:0,179:179:99:5659,537,0 chr1 205646819 . C A 2210.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=0.259;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=3.312;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=24.29;ReadPosRankSum=1.948;SOR=2.219 GT:AD:DP:GQ:PL 1/1:3,88:91:99:2239,207,0 chr1 205661765 . A G 986.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.097;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=0.934;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.58;ReadPosRankSum=-0.679;SOR=0.515 GT:AD:DP:GQ:PL 0/1:66,37:103:99:1015,0,2051 chr1 205662639 . A G 187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.280;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=2.000;SOR=1.402 GT:AD:DP:GQ:PL 0/1:7,7:14:99:216,0,204 chr1 205663804 . A G 837.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.195;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=1.170;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.89;ReadPosRankSum=-0.811;SOR=0.892 GT:AD:DP:GQ:PL 0/1:37,28:65:99:866,0,1131 chr1 205671634 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 205678027 . T G 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.63;ReadPosRankSum=0.967;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:31:98,0,31 chr1 205680045 . T C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 205680199 . C T 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 205684850 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 205720679 . T G 796.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.234;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.35;ReadPosRankSum=-0.338;SOR=0.602 GT:AD:DP:GQ:PL 0/1:46,31:77:99:825,0,1313 chr1 205722672 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205727487 . T A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,104 chr1 205727543 . G A 673.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,18:18:54:702,54,0 chr1 205749730 . A T 242.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.863;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.28;ReadPosRankSum=1.651;SOR=1.609 GT:AD:DP:GQ:PL 0/1:9,8:17:99:271,0,291 chr1 205770064 . T C 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.81;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 205770138 . C T 328.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.026;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=4.295;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.74;ReadPosRankSum=-0.269;SOR=0.169 GT:AD:DP:GQ:PL 0/1:15,13:28:99:357,0,474 chr1 205770268 . T G 4180.77 PASS AC=2;AF=1.00;AN=2;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.63;SOR=1.690 GT:AD:DP:GQ:PL 1/1:0,119:119:99:4209,358,0 chr1 205771275 . A G 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.76;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr1 205772298 . T C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 205772688 . A T 668.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.01;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:697,51,0 chr1 205774535 . A C 95.03 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.84;ReadPosRankSum=0.674;SOR=0.707 GT:AD:DP:GQ:PL 0/1:1,5:6:12:123,0,12 chr1 205775010 . G T 1082.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.742;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=2.115;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.06;ReadPosRankSum=-1.553;SOR=1.094 GT:AD:DP:GQ:PL 0/1:37,40:77:99:1111,0,976 chr1 205775090 . C T 532.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.380;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.32;ReadPosRankSum=-0.803;SOR=0.826 GT:AD:DP:GQ:PL 0/1:22,18:40:99:561,0,698 chr1 205795512 . G A 5472.77 PASS AC=2;AF=1.00;AN=2;DP=175;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.45;SOR=1.096 GT:AD:DP:GQ:PL 1/1:0,174:174:99:5501,521,0 chr1 205796667 . T A 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.18;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr1 205798757 . G A 3182.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.374;ClippingRankSum=0.000;DP=250;ExcessHet=3.0103;FS=4.250;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.78;ReadPosRankSum=0.714;SOR=0.945 GT:AD:DP:GQ:PL 0/1:120,129:249:99:3211,0,3277 chr1 205800095 . C T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.328;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 205820327 . A T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 205828905 . G A 978.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.141;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.24;ReadPosRankSum=-0.721;SOR=2.303 GT:AD:DP:GQ:PL 1/1:1,26:27:39:1007,39,0 chr1 205829185 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205829404 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205832744 . A G 2130.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.350;ClippingRankSum=0.000;DP=193;ExcessHet=3.0103;FS=1.123;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.10;ReadPosRankSum=-1.201;SOR=0.783 GT:AD:DP:GQ:PL 0/1:104,88:192:99:2159,0,2632 chr1 205840514 . G C 3649.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=2.193 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3678,315,0 chr1 205843486 . C T 703.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.61;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,20:20:60:732,60,0 chr1 205844544 . T C 2111.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.12;SOR=3.306 GT:AD:DP:GQ:PL 1/1:0,47:47:99:2140,144,0 chr1 205844549 . T C 2201.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.81;SOR=2.746 GT:AD:DP:GQ:PL 1/1:0,51:51:99:2230,153,0 chr1 205845369 . T C 10072.77 PASS AC=2;AF=1.00;AN=2;DP=319;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.58;SOR=0.999 GT:AD:DP:GQ:PL 1/1:0,319:319:99:10101,958,0 chr1 205847795 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=31.11;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 205853550 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205915098 . C A 4323.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.582;ClippingRankSum=0.000;DP=319;ExcessHet=3.0103;FS=3.065;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.64;ReadPosRankSum=1.956;SOR=0.539 GT:AD:DP:GQ:PL 0/1:164,153:317:99:4352,0,4639 chr1 205917018 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 205917253 . C T 1657.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.723;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=10.167;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.28;ReadPosRankSum=0.880;SOR=0.285 GT:AD:DP:GQ:PL 0/1:83,64:147:99:1686,0,2224 chr1 205917685 . C A 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.34;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 205918646 . A G 60.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.13;ReadPosRankSum=-1.282;SOR=2.093 GT:AD:DP:GQ:PL 0/1:3,3:6:89:89,0,107 chr1 205919015 . G C 1960.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.939;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=2.629;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.20;ReadPosRankSum=-0.315;SOR=0.460 GT:AD:DP:GQ:PL 0/1:56,65:121:99:1989,0,1507 chr1 205919144 . T C 655.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.82;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,18:18:54:684,54,0 chr1 205921551 . T C 2878.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.29;SOR=1.346 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2907,276,0 chr1 205923283 . T C 4181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.287;ClippingRankSum=0.000;DP=230;ExcessHet=3.0103;FS=3.665;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.18;ReadPosRankSum=1.062;SOR=0.866 GT:AD:DP:GQ:PL 0/1:122,108:230:99:4210,0,6910 chr1 205923287 . C T 4257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.123;ClippingRankSum=0.000;DP=238;ExcessHet=3.0103;FS=2.177;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.89;ReadPosRankSum=0.829;SOR=0.809 GT:AD:DP:GQ:PL 0/1:125,113:238:99:4286,0,6914 chr1 205924571 . T C 1644.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.142;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=2.949;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=0.802;SOR=0.441 GT:AD:DP:GQ:PL 0/1:49,61:110:99:1673,0,1260 chr1 205927107 . G A 2878.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.633;ClippingRankSum=0.000;DP=237;ExcessHet=3.0103;FS=0.516;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.15;ReadPosRankSum=0.056;SOR=0.635 GT:AD:DP:GQ:PL 0/1:129,108:237:99:2907,0,3858 chr1 205927347 . C T 5582.77 PASS AC=2;AF=1.00;AN=2;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.09;SOR=1.685 GT:AD:DP:GQ:PL 1/1:0,159:159:99:5611,477,0 chr1 205927820 . A G 2231.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.980;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.83;ReadPosRankSum=-0.697;SOR=0.683 GT:AD:DP:GQ:PL 0/1:67,74:141:99:2260,0,2097 chr1 205928290 . A C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 205928748 . C T 1872.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.183;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=2.155;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.93;ReadPosRankSum=0.837;SOR=0.494 GT:AD:DP:GQ:PL 0/1:83,74:157:99:1901,0,2349 chr1 205929510 . C T 1205.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.521;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=2.471;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.27;ReadPosRankSum=-0.176;SOR=1.157 GT:AD:DP:GQ:PL 0/1:28,38:66:99:1234,0,835 chr1 205929700 . G T 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.221;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=1.025;SOR=1.919 GT:AD:DP:GQ:PL 0/1:5,5:10:99:145,0,179 chr1 205930183 . T A 1291.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.068;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=4.097;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.45;ReadPosRankSum=2.072;SOR=0.166 GT:AD:DP:GQ:PL 0/1:29,41:70:99:1320,0,959 chr1 205932159 . T A 587.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.613;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.07;ReadPosRankSum=-0.973;SOR=0.446 GT:AD:DP:GQ:PL 0/1:19,20:39:99:616,0,608 chr1 205932660 . G T 1620.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.200;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.89;ReadPosRankSum=0.368;SOR=0.693 GT:AD:DP:GQ:PL 0/1:51,51:102:99:1649,0,1641 chr1 205952118 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 205952224 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 205983040 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 205983125 . T A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 205984768 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 205985751 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 205985763 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 205985764 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 205989652 . T C 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.981;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.42;ReadPosRankSum=1.383;SOR=1.981 GT:AD:DP:GQ:PL 0/1:4,5:9:42:149,0,42 chr1 205989735 . G A 162.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.619;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.35;ReadPosRankSum=-0.921;SOR=0.269 GT:AD:DP:GQ:PL 0/1:2,6:8:59:191,0,59 chr1 205989829 . C A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 205992708 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 206012565 . A G 2945.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.373;ClippingRankSum=0.000;DP=230;ExcessHet=3.0103;FS=0.504;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.81;ReadPosRankSum=1.322;SOR=0.643 GT:AD:DP:GQ:PL 0/1:124,106:230:99:2974,0,3418 chr1 206012721 . C G 761.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=1.289;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.94;ReadPosRankSum=0.351;SOR=0.412 GT:AD:DP:GQ:PL 0/1:25,26:51:99:790,0,789 chr1 206013567 . T C 352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.934;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.57;ReadPosRankSum=0.462;SOR=0.430 GT:AD:DP:GQ:PL 0/1:15,11:26:99:381,0,536 chr1 206013858 . A G 1568.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.575;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=1.321;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.87;ReadPosRankSum=0.954;SOR=0.851 GT:AD:DP:GQ:PL 0/1:97,62:159:99:1597,0,2686 chr1 206115749 . C T 655.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.217;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.39;ReadPosRankSum=0.644;SOR=0.693 GT:AD:DP:GQ:PL 0/1:18,22:40:99:684,0,529 chr1 206378753 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 206430185 . G A 1614.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.364;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.16;ReadPosRankSum=-0.603;SOR=0.745 GT:AD:DP:GQ:PL 0/1:55,59:114:99:1643,0,1398 chr1 206450521 . T C 2724.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.031;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=4.084;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.83;ReadPosRankSum=-1.013;SOR=0.440 GT:AD:DP:GQ:PL 0/1:101,96:197:99:2753,0,3039 chr1 206452910 . T G 99.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.589;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.09;ReadPosRankSum=-0.453;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:128,0,151 chr1 206453261 . A G 3440.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.497;ClippingRankSum=0.000;DP=247;ExcessHet=3.0103;FS=0.463;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.93;ReadPosRankSum=0.644;SOR=0.740 GT:AD:DP:GQ:PL 0/1:121,126:247:99:3469,0,2935 chr1 206453482 . G C 460.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.07;ReadPosRankSum=-0.055;SOR=0.765 GT:AD:DP:GQ:PL 0/1:13,14:27:99:489,0,458 chr1 206453529 . C G 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.35;ReadPosRankSum=-0.842;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:65:65,0,73 chr1 206458186 . T A 184.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.111;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=-1.064;SOR=0.569 GT:AD:DP:GQ:PL 0/1:8,7:15:99:213,0,243 chr1 206461084 . A G 2416.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.959;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=0.569;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=-0.148;SOR=0.747 GT:AD:DP:GQ:PL 0/1:77,91:168:99:2445,0,2084 chr1 206468526 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 206468531 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 206472931 . G T 164.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.60;ReadPosRankSum=-0.566;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,6:8:25:193,0,25 chr1 206472968 . C T 199.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.903;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.98;ReadPosRankSum=0.610;SOR=1.863 GT:AD:DP:GQ:PL 0/1:3,7:10:61:228,0,61 chr1 206473084 . C A 1504.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.918;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=1.196;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.81;ReadPosRankSum=1.942;SOR=0.434 GT:AD:DP:GQ:PL 0/1:62,47:109:99:1533,0,2050 chr1 206474107 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 206474444 . T C 17077.77 PASS AC=2;AF=1.00;AN=2;DP=526;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,526:526:99:17106,1578,0 chr1 206475035 . G A 1065.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.616;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.39;ReadPosRankSum=-0.013;SOR=0.767 GT:AD:DP:GQ:PL 0/1:50,36:86:99:1094,0,1474 chr1 206476029 . T C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,154 chr1 206476030 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,154 chr1 206477764 . G A 906.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.586;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.63;ReadPosRankSum=0.240;SOR=0.636 GT:AD:DP:GQ:PL 0/1:44,34:78:99:935,0,1327 chr1 206478007 . C T 913.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.658;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=1.216;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.74;ReadPosRankSum=0.476;SOR=1.077 GT:AD:DP:GQ:PL 0/1:29,33:62:99:942,0,837 chr1 206491063 . A T 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.792;SOR=0.223 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 206491074 . T G 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.842;SOR=0.368 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 206492563 . C G 2467.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.197;ClippingRankSum=0.000;DP=186;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=-0.025;SOR=0.716 GT:AD:DP:GQ:PL 0/1:98,87:185:99:2496,0,2873 chr1 206493401 . T G 3206.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.953;ClippingRankSum=0.000;DP=275;ExcessHet=3.0103;FS=2.643;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.66;ReadPosRankSum=-0.140;SOR=0.853 GT:AD:DP:GQ:PL 0/1:150,125:275:99:3235,0,3827 chr1 206496132 . C T 2582.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.976;ClippingRankSum=0.000;DP=227;ExcessHet=3.0103;FS=1.628;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.43;ReadPosRankSum=-1.876;SOR=0.819 GT:AD:DP:GQ:PL 0/1:127,99:226:99:2611,0,3420 chr1 206507650 . A C 1110.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.959;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=1.798;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.38;ReadPosRankSum=0.601;SOR=0.930 GT:AD:DP:GQ:PL 0/1:40,43:83:99:1139,0,954 chr1 206551409 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 206587144 . A G 148.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:177,15,0 chr1 206593486 . A C 474.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.577;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=29.67;ReadPosRankSum=0.851;SOR=0.368 GT:AD:DP:GQ:PL 0/1:4,12:16:99:503,0,99 chr1 206593508 . A T 875.73 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;QD=32.21;SOR=1.292 GT:AD:DP:GQ:PL 1/1:1,20:21:54:852,54,0 chr1 206595698 . T C 950.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.766;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=4.152;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.33;ReadPosRankSum=0.786;SOR=1.493 GT:AD:DP:GQ:PL 0/1:31,31:62:99:979,0,809 chr1 206600468 . T C 339.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.65;ReadPosRankSum=-1.228;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,10:15:99:368,0,164 chr1 206602743 . A G 398.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.577;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=6.831;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.39;ReadPosRankSum=-0.748;SOR=0.105 GT:AD:DP:GQ:PL 0/1:19,16:35:99:427,0,652 chr1 206605289 . A C 1091.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.845;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=2.450;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.22;ReadPosRankSum=1.226;SOR=1.699 GT:AD:DP:GQ:PL 0/1:23,31:54:99:1120,0,726 chr1 206611456 . T C 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=0.847;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr1 206612651 . T A 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 206695009 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 206696325 . C T 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=-0.431;SOR=0.368 GT:AD:DP:GQ:PL 0/1:2,4:6:66:115,0,66 chr1 206729126 . G A 1805.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.994;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=2.612;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.68;ReadPosRankSum=-0.084;SOR=0.478 GT:AD:DP:GQ:PL 0/1:58,65:123:99:1834,0,1763 chr1 206731119 . C T 2546.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.539;ClippingRankSum=0.000;DP=195;ExcessHet=3.0103;FS=3.239;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.06;ReadPosRankSum=1.719;SOR=0.865 GT:AD:DP:GQ:PL 0/1:100,95:195:99:2575,0,2540 chr1 206750881 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 206752632 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 206768519 . A G 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.29;ReadPosRankSum=0.649;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,7:13:99:253,0,207 chr1 206770006 . T C 1931.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.99;SOR=2.024 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1960,165,0 chr1 206770767 . T A 2155.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.088;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=2.371;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.87;ReadPosRankSum=0.076;SOR=0.472 GT:AD:DP:GQ:PL 0/1:62,83:145:99:2184,0,1714 chr1 206770888 . A G 7773.77 PASS AC=2;AF=1.00;AN=2;DP=229;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.40;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,226:226:99:7802,678,0 chr1 206771300 . T C 1889.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.94;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1918,150,0 chr1 206771516 . A C 3381.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.945;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=5.257;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.52;ReadPosRankSum=0.300;SOR=1.783 GT:AD:DP:GQ:PL 1/1:1,103:104:99:3410,306,0 chr1 206771966 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 206772036 . G A 344.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.989;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.28;ReadPosRankSum=-0.394;SOR=1.473 GT:AD:DP:GQ:PL 0/1:6,11:17:99:373,0,198 chr1 206789071 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 206798727 . C T 1962.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.45;SOR=2.522 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1991,165,0 chr1 206836043 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 206836565 . T C 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.421;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.59;ReadPosRankSum=-0.246;SOR=1.179 GT:AD:DP:GQ:PL 0/1:21,9:30:99:286,0,759 chr1 206841127 . A C 1833.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.293;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=1.276;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.25;ReadPosRankSum=0.246;SOR=0.815 GT:AD:DP:GQ:PL 0/1:92,71:163:99:1862,0,2590 chr1 206841431 . C T 122.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.35;ReadPosRankSum=0.319;SOR=0.582 GT:AD:DP:GQ:PL 0/1:3,5:8:67:151,0,67 chr1 206842612 . T C 1648.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.232;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.30;ReadPosRankSum=0.342;SOR=0.684 GT:AD:DP:GQ:PL 0/1:59,65:124:99:1677,0,1457 chr1 206867232 . G A 630.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.35;ReadPosRankSum=-0.524;SOR=0.346 GT:AD:DP:GQ:PL 0/1:13,18:31:99:659,0,450 chr1 206867314 . G A 1762.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.046;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.20;ReadPosRankSum=1.541;SOR=0.735 GT:AD:DP:GQ:PL 0/1:55,61:116:99:1791,0,1575 chr1 206898250 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 206899170 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.16;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 206899614 . C T 3537.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.09;SOR=3.352 GT:AD:DP:GQ:PL 1/1:0,98:98:99:3566,294,0 chr1 206899788 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 206900146 . T C 842.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.11;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:871,63,0 chr1 206901560 . T C 3797.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.38;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3826,375,0 chr1 206901826 . T C 1137.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.48;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,33:33:98:1166,98,0 chr1 206908309 . A G 419.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.98;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:42:448,42,0 chr1 206913500 . T C 680.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.66;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:709,51,0 chr1 206913624 . A G 3064.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.31;SOR=2.059 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3093,276,0 chr1 206914090 . C T 3785.77 PASS AC=2;AF=1.00;AN=2;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.59;SOR=2.347 GT:AD:DP:GQ:PL 1/1:0,108:108:99:3814,325,0 chr1 206932296 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 206935771 . C T 3348.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.89;SOR=1.015 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3377,313,0 chr1 206935822 . G A 2349.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.75;SOR=1.209 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2378,222,0 chr1 206937018 . A G 1952.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=2.262 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1981,171,0 chr1 206937591 . T C 6543.77 PASS AC=2;AF=1.00;AN=2;DP=193;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.91;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,193:193:99:6572,579,0 chr1 206937912 . G T 2466.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.04;SOR=1.463 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2495,231,0 chr1 206940334 . T C 1578.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.96;SOR=1.094 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1607,153,0 chr1 206940410 . G C 2331.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.94;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2360,219,0 chr1 206944883 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 206959000 . A G 2408.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.12;SOR=1.488 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2437,225,0 chr1 206965701 . A G 1719.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.40;SOR=2.701 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1748,150,0 chr1 206966017 . C G 1568.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.78;SOR=2.885 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1597,132,0 chr1 206967095 . C T 3896.77 PASS AC=2;AF=1.00;AN=2;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.98;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,130:130:99:3925,390,0 chr1 206967889 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 206969162 . T C 1440.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.83;SOR=4.921 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1469,108,0 chr1 206969951 . C T 388.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.22;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:417,30,0 chr1 206970077 . A G 2125.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.92;SOR=2.546 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2154,180,0 chr1 206970205 . C T 4588.77 PASS AC=2;AF=1.00;AN=2;DP=150;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.59;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,150:150:99:4617,450,0 chr1 206980536 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 207022434 . A G 7918.77 PASS AC=2;AF=1.00;AN=2;DP=238;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.27;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,238:238:99:7947,714,0 chr1 207050983 . A G 646.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.612;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.35;ReadPosRankSum=-0.538;SOR=0.804 GT:AD:DP:GQ:PL 0/1:35,22:57:99:675,0,954 chr1 207051921 . T C 73.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.489;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.22;ReadPosRankSum=1.345;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:102,0,153 chr1 207062609 . G A 2978.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.305;ClippingRankSum=0.000;DP=225;ExcessHet=3.0103;FS=0.486;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.24;ReadPosRankSum=-1.300;SOR=0.743 GT:AD:DP:GQ:PL 0/1:107,118:225:99:3007,0,2851 chr1 207065443 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 207070506 . A G 1432.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.85;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1461,143,0 chr1 207071700 . T C 1122.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.465;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=2.745;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.91;ReadPosRankSum=1.071;SOR=0.364 GT:AD:DP:GQ:PL 0/1:48,39:87:99:1151,0,1507 chr1 207089635 . T G 1474.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.079;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.19;ReadPosRankSum=1.046;SOR=0.703 GT:AD:DP:GQ:PL 0/1:64,57:121:99:1503,0,1726 chr1 207090484 . A G 2350.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.374;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=2.168;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.67;ReadPosRankSum=-1.235;SOR=0.947 GT:AD:DP:GQ:PL 0/1:68,82:150:99:2379,0,1648 chr1 207096513 . T C 1823.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.314;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.14;ReadPosRankSum=-0.278;SOR=0.625 GT:AD:DP:GQ:PL 0/1:51,62:113:99:1852,0,1340 chr1 207096574 . C T 1893.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.357;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=2.063;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=-0.612;SOR=0.579 GT:AD:DP:GQ:PL 0/1:74,73:147:99:1922,0,1837 chr1 207113412 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 207114952 . C T 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.967;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 207115552 . T C 135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.610;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=9.951;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.79;ReadPosRankSum=0.729;SOR=0.036 GT:AD:DP:GQ:PL 0/1:13,7:20:99:164,0,437 chr1 207124139 . G C 954.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.68;ReadPosRankSum=0.553;SOR=0.743 GT:AD:DP:GQ:PL 0/1:25,29:54:99:983,0,814 chr1 207124335 . T C 3497.77 PASS AC=2;AF=1.00;AN=2;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.95;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,113:113:99:3526,338,0 chr1 207141043 . C T 77.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.087;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.38;ReadPosRankSum=0.131;SOR=0.765 GT:AD:DP:GQ:PL 0/1:18,5:23:99:106,0,568 chr1 207322082 . G T 142.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.411;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.52;ReadPosRankSum=1.327;SOR=0.368 GT:AD:DP:GQ:PL 0/1:9,6:15:99:171,0,297 chr1 207326948 . C T 351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.486;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.07;ReadPosRankSum=1.779;SOR=1.179 GT:AD:DP:GQ:PL 0/1:13,12:25:99:380,0,399 chr1 207331324 . G A 592.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.761;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=3.254;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.82;ReadPosRankSum=-0.249;SOR=1.445 GT:AD:DP:GQ:PL 0/1:19,21:40:99:621,0,457 chr1 207331403 . C A 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-1.345;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr1 207336944 . T C 479.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.46;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:508,39,0 chr1 207337203 . A G 336.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.05;ReadPosRankSum=-0.066;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,10:16:99:365,0,202 chr1 207337251 . G A 687.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.283;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.38;ReadPosRankSum=0.126;SOR=1.089 GT:AD:DP:GQ:PL 0/1:21,21:42:99:716,0,650 chr1 207347443 . G A 475.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.62;ReadPosRankSum=0.955;SOR=0.765 GT:AD:DP:GQ:PL 0/1:13,14:27:99:504,0,454 chr1 207371581 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 207454348 . T C 94.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.80;ReadPosRankSum=-0.210;SOR=0.368 GT:AD:DP:GQ:PL 0/1:1,5:6:24:123,0,24 chr1 207454573 . G A 206.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.969;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.91;ReadPosRankSum=0.924;SOR=1.402 GT:AD:DP:GQ:PL 0/1:4,9:13:99:235,0,128 chr1 207468495 . C T 327.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.279;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.21;ReadPosRankSum=-0.746;SOR=0.387 GT:AD:DP:GQ:PL 0/1:7,11:18:99:356,0,227 chr1 207468950 . G A 599.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.565;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=2.561;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.04;ReadPosRankSum=-1.072;SOR=0.767 GT:AD:DP:GQ:PL 0/1:21,25:46:99:628,0,672 chr1 207470328 . T C 343.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.38;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:372,30,0 chr1 207471610 . A G 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=0.765;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,140 chr1 207472550 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 207472611 . C A 384.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.45;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:413,30,0 chr1 207472977 . G A 3676.77 PASS AC=2;AF=1.00;AN=2;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.90;SOR=1.104 GT:AD:DP:GQ:PL 1/1:0,119:119:99:3705,356,0 chr1 207473117 . G A 1696.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.27;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1725,152,0 chr1 207473553 . T C 2090.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.85;SOR=2.080 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2119,180,0 chr1 207473578 . G A 2522.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.34;SOR=1.670 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2551,233,0 chr1 207474828 . T C 678.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.834;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.58;ReadPosRankSum=-1.206;SOR=0.602 GT:AD:DP:GQ:PL 0/1:26,24:50:99:707,0,713 chr1 207477714 . T C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.524;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 207479647 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 207479761 . A C 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.53;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr1 207479833 . C G 1043.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.63;SOR=1.542 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1072,99,0 chr1 207480050 . C A 1364.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.29;SOR=1.347 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1393,123,0 chr1 207480099 . T A 484.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.339;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=1.394;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.26;ReadPosRankSum=0.789;SOR=1.165 GT:AD:DP:GQ:PL 0/1:16,18:34:99:513,0,430 chr1 207480342 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 207480356 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 207497093 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 207505962 . A G 1621.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.826;ClippingRankSum=0.000;DP=143;ExcessHet=3.0103;FS=0.657;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.34;ReadPosRankSum=2.071;SOR=0.808 GT:AD:DP:GQ:PL 0/1:79,64:143:99:1650,0,2023 chr1 207565782 . A G 280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.326;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.570;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.37;ReadPosRankSum=-0.906;SOR=0.180 GT:AD:DP:GQ:PL 0/1:12,9:21:99:309,0,404 chr1 207568072 . G T 1519.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.851;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=0.622;MLEAC=1;MLEAF=0.500;MQ=56.50;MQRankSum=-2.079;QD=7.34;ReadPosRankSum=-1.959;SOR=0.609 GT:AD:DP:GQ:PL 0/1:145,62:207:99:1548,0,4124 chr1 207580000 . C T 946.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.094;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.91;ReadPosRankSum=-0.765;SOR=0.773 GT:AD:DP:GQ:PL 0/1:27,29:56:99:975,0,845 chr1 207609571 . A T 3476.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3505,309,0 chr1 207611623 . A G 893.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.653;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=2.070;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.42;ReadPosRankSum=0.277;SOR=0.473 GT:AD:DP:GQ:PL 0/1:30,32:62:99:922,0,896 chr1 207621975 . A G 401.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.019;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=1.301;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=0.691;SOR=0.999 GT:AD:DP:GQ:PL 0/1:20,16:36:99:430,0,511 chr1 207622720 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 207630796 . A C 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.366;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,141 chr1 207677194 . C T 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-0.842;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 207707911 . G A 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.56;ReadPosRankSum=-0.464;SOR=0.269 GT:AD:DP:GQ:PL 0/1:8,4:12:99:131,0,285 chr1 207708144 . T G 1947.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.028;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=2.238;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.54;ReadPosRankSum=0.901;SOR=0.898 GT:AD:DP:GQ:PL 0/1:81,53:134:99:1976,0,4770 chr1 207708146 . C A 1950.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.421;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=2.238;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.56;ReadPosRankSum=0.776;SOR=0.898 GT:AD:DP:GQ:PL 0/1:81,53:134:99:1979,0,4733 chr1 207708212 . A G 897.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.129;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=4.218;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.65;ReadPosRankSum=-2.139;SOR=1.155 GT:AD:DP:GQ:PL 0/1:60,33:93:99:926,0,1565 chr1 207710562 . T G 1421.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.653;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.714;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.47;ReadPosRankSum=0.377;SOR=0.770 GT:AD:DP:GQ:PL 0/1:61,53:114:99:1450,0,1780 chr1 207710760 . C A 463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.091;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.96;ReadPosRankSum=-0.796;SOR=0.610 GT:AD:DP:GQ:PL 0/1:18,13:31:99:492,0,1109 chr1 207710762 . G A 463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.070;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.96;ReadPosRankSum=-0.974;SOR=0.610 GT:AD:DP:GQ:PL 0/1:18,13:31:99:492,0,1109 chr1 207712500 . A G 98.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.494;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=2.632;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.98;ReadPosRankSum=0.510;SOR=0.180 GT:AD:DP:GQ:PL 0/1:6,5:11:99:127,0,184 chr1 207712536 . C T 231.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.817;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=3.233;MLEAC=1;MLEAF=0.500;MQ=59.48;MQRankSum=-0.579;QD=14.49;ReadPosRankSum=-0.804;SOR=0.105 GT:AD:DP:GQ:PL 0/1:7,9:16:99:260,0,240 chr1 207712805 . C T 2936.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.952;ClippingRankSum=0.000;DP=216;ExcessHet=3.0103;FS=1.097;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.60;ReadPosRankSum=-0.600;SOR=0.787 GT:AD:DP:GQ:PL 0/1:102,114:216:99:2965,0,2839 chr1 207715281 . C T 610.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.748;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=4.237;MLEAC=1;MLEAF=0.500;MQ=59.83;MQRankSum=-1.168;QD=13.28;ReadPosRankSum=0.742;SOR=0.423 GT:AD:DP:GQ:PL 0/1:19,27:46:99:639,0,551 chr1 207715359 . T C 644.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.114;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=2.120;MLEAC=1;MLEAF=0.500;MQ=59.31;MQRankSum=-2.542;QD=10.75;ReadPosRankSum=-0.788;SOR=0.878 GT:AD:DP:GQ:PL 0/1:33,27:60:99:673,0,857 chr1 207715394 . G T 789.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.580;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.25;MQRankSum=2.655;QD=14.36;ReadPosRankSum=0.842;SOR=0.688 GT:AD:DP:GQ:PL 0/1:24,31:55:99:818,0,904 chr1 207715415 . C T 486.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.242;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.22;MQRankSum=-2.741;QD=9.18;ReadPosRankSum=0.293;SOR=0.564 GT:AD:DP:GQ:PL 0/1:31,22:53:99:515,0,1223 chr1 207717521 . T C 4729.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.436;ClippingRankSum=0.000;DP=358;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.27;MQRankSum=-5.483;QD=13.25;ReadPosRankSum=-1.215;SOR=0.702 GT:AD:DP:GQ:PL 0/1:178,179:357:99:4758,0,4624 chr1 207757830 . T G 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr1 207761142 . A C 164.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.48;QD=32.98;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:193,15,0 chr1 207767846 . G T 375.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.18;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:30:404,30,0 chr1 207825016 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 207867260 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 207888915 . T C 2046.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.55;SOR=2.265 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2075,183,0 chr1 207889126 . A C 525.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.147;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=-1.007;SOR=0.859 GT:AD:DP:GQ:PL 0/1:23,22:45:99:554,0,580 chr1 207889628 . A T 1589.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.935;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=0.679;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.36;ReadPosRankSum=-0.568;SOR=0.783 GT:AD:DP:GQ:PL 0/1:55,64:119:99:1618,0,1244 chr1 207889722 . G A 1271.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.738;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=0.848;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.96;ReadPosRankSum=-0.168;SOR=0.822 GT:AD:DP:GQ:PL 0/1:38,47:85:99:1300,0,931 chr1 207899352 . G A 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=-0.967;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,137 chr1 207899393 . A C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.38;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 207964710 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 207984568 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 208015296 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 208022736 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 208027725 . T C 251.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.65;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:280,21,0 chr1 208029332 . A C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 208033049 . A G 146.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:174,12,0 chr1 208033601 . C G 490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.562;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.18;ReadPosRankSum=1.729;SOR=0.848 GT:AD:DP:GQ:PL 0/1:11,16:27:99:519,0,276 chr1 208033700 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 208034494 . G A 1996.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.248;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=1.279;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.72;ReadPosRankSum=-1.031;SOR=0.564 GT:AD:DP:GQ:PL 0/1:72,85:157:99:2025,0,1877 chr1 208034689 . G C 1600.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.180;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.878;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.67;ReadPosRankSum=0.548;SOR=0.818 GT:AD:DP:GQ:PL 0/1:42,54:96:99:1629,0,1185 chr1 208034779 . C A 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.32;ReadPosRankSum=-0.047;SOR=0.250 GT:AD:DP:GQ:PL 0/1:14,7:21:99:224,0,518 chr1 208038542 . T C 1188.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.96;SOR=1.819 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1217,102,0 chr1 208039052 . A G 1405.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.332;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.97;ReadPosRankSum=0.177;SOR=0.801 GT:AD:DP:GQ:PL 0/1:40,48:88:99:1434,0,1116 chr1 208039431 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 208039780 . A G 6716.77 PASS AC=2;AF=1.00;AN=2;DP=203;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.25;SOR=0.982 GT:AD:DP:GQ:PL 1/1:0,202:202:99:6745,606,0 chr1 208040308 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 208045819 . A C 2917.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.17;SOR=3.528 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2946,238,0 chr1 208051610 . G C 653.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.029;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=2.637;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.72;ReadPosRankSum=-0.405;SOR=1.850 GT:AD:DP:GQ:PL 0/1:40,21:61:99:682,0,1407 chr1 208051612 . C T 2499.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.67;SOR=5.387 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2528,184,0 chr1 208061043 . G T 164.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.69;ReadPosRankSum=-0.374;SOR=0.293 GT:AD:DP:GQ:PL 0/1:11,6:17:99:193,0,408 chr1 208079111 . C T 482.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.207;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=5.191;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.78;ReadPosRankSum=1.712;SOR=1.828 GT:AD:DP:GQ:PL 0/1:38,17:55:99:511,0,1146 chr1 208079144 . T C 1251.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.574;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=3.697;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.63;ReadPosRankSum=0.624;SOR=0.349 GT:AD:DP:GQ:PL 0/1:26,45:71:99:1280,0,727 chr1 208079159 . C A 1051.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.645;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.838;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.69;ReadPosRankSum=-2.638;SOR=0.844 GT:AD:DP:GQ:PL 0/1:50,40:90:99:1080,0,1363 chr1 208082532 . T C 1840.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.568;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=0.652;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.27;ReadPosRankSum=-0.896;SOR=0.605 GT:AD:DP:GQ:PL 0/1:79,71:150:99:1869,0,2199 chr1 208084284 . G A 283.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.94;ReadPosRankSum=-0.754;SOR=0.602 GT:AD:DP:GQ:PL 0/1:10,9:19:99:312,0,360 chr1 208084757 . T C 132.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.30;ReadPosRankSum=-0.591;SOR=0.223 GT:AD:DP:GQ:PL 0/1:11,5:16:99:161,0,411 chr1 208090312 . G A 38.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.150;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:67,0,30 chr1 208093124 . G T 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.49;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 208096486 . T C 65.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.31;ReadPosRankSum=0.210;SOR=1.022 GT:AD:DP:GQ:PL 0/1:6,3:9:94:94,0,189 chr1 208096899 . A C 1927.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.507;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=1.497;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.60;ReadPosRankSum=-0.527;SOR=0.852 GT:AD:DP:GQ:PL 0/1:88,65:153:99:1956,0,2629 chr1 208134702 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 208155618 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 208196358 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 208217753 . T C 7373.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.606;ClippingRankSum=0.000;DP=529;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.94;ReadPosRankSum=0.158;SOR=0.698 GT:AD:DP:GQ:PL 0/1:256,273:529:99:7402,0,6951 chr1 208230333 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 208230337 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 208231478 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 208388813 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 208483157 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 208528493 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 208528562 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 208543400 . G A 80.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0 chr1 208697710 . G T 498.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.236;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=5.478;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.78;ReadPosRankSum=-1.171;SOR=0.116 GT:AD:DP:GQ:PL 0/1:4,20:24:95:527,0,95 chr1 208763395 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 208902213 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 208928049 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 208928050 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 208988227 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 209027020 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 209027024 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 209051909 . C G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 209142787 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 209142839 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 209173386 . G A 1545.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.88;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1574,123,0 chr1 209173648 . G A 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.23;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr1 209232664 . A G 396.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.47;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,11:11:33:425,33,0 chr1 209232828 . A G 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 209233559 . C T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.08;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 209251356 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 209251388 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 209332567 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 209377769 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 209430651 . A G 3340.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=2.285;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=3.817;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.39;ReadPosRankSum=-0.759;SOR=2.461 GT:AD:DP:GQ:PL 1/1:2,92:94:99:3369,233,0 chr1 209545867 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 209562381 . A G 54.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:82,9,0 chr1 209575814 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 209584155 . A G 328.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.89;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:33:357,33,0 chr1 209605392 . G A 675.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.242;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.45;ReadPosRankSum=-0.238;SOR=0.723 GT:AD:DP:GQ:PL 0/1:37,22:59:99:704,0,1232 chr1 209605426 . G C 1025.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.349;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.47;ReadPosRankSum=1.175;SOR=0.607 GT:AD:DP:GQ:PL 0/1:60,38:98:99:1054,0,1860 chr1 209605781 . C A 750.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.949;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=4.691;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.02;ReadPosRankSum=0.620;SOR=0.165 GT:AD:DP:GQ:PL 0/1:26,24:50:99:779,0,899 chr1 209605792 . C T 647.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.434;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.61;ReadPosRankSum=0.184;SOR=1.609 GT:AD:DP:GQ:PL 0/1:20,19:39:99:676,0,674 chr1 209606307 . T G 790.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.749;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.845;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.09;ReadPosRankSum=0.794;SOR=0.556 GT:AD:DP:GQ:PL 0/1:52,35:87:99:819,0,1437 chr1 209606460 . G A 766.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.884;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=5.640;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.98;ReadPosRankSum=-0.285;SOR=1.542 GT:AD:DP:GQ:PL 0/1:36,28:64:99:795,0,936 chr1 209606608 . G A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,115 chr1 209607780 . T C 730.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.730;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=4.196;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.82;ReadPosRankSum=0.478;SOR=1.336 GT:AD:DP:GQ:PL 0/1:32,25:57:99:759,0,970 chr1 209608776 . G T 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.803;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=-0.619;SOR=2.303 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,112 chr1 209608998 . A G 1190.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.391;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=1.655;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.92;ReadPosRankSum=1.259;SOR=0.897 GT:AD:DP:GQ:PL 0/1:63,46:109:99:1219,0,1745 chr1 209611318 . A C 2241.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.71;SOR=5.820 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2270,169,0 chr1 209611582 . G T 2426.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.646;ClippingRankSum=0.000;DP=174;ExcessHet=3.0103;FS=2.747;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.95;ReadPosRankSum=-0.777;SOR=0.933 GT:AD:DP:GQ:PL 0/1:93,81:174:99:2455,0,2692 chr1 209611666 . G C 1407.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.747;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=0.750;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.67;ReadPosRankSum=-1.680;SOR=0.593 GT:AD:DP:GQ:PL 0/1:58,45:103:99:1436,0,1704 chr1 209612612 . T G 2316.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=2.034;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=34.07;ReadPosRankSum=-0.536;SOR=0.917 GT:AD:DP:GQ:PL 1/1:1,67:68:99:2345,194,0 chr1 209612733 . G A 5350.77 PASS AC=2;AF=1.00;AN=2;DP=169;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.66;SOR=1.297 GT:AD:DP:GQ:PL 1/1:0,169:169:99:5379,506,0 chr1 209614868 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 209615169 . G A 3325.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.494;ClippingRankSum=0.000;DP=220;ExcessHet=3.0103;FS=0.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.12;ReadPosRankSum=-0.621;SOR=0.646 GT:AD:DP:GQ:PL 0/1:100,120:220:99:3354,0,2742 chr1 209615358 . T C 2879.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.357;ClippingRankSum=0.000;DP=229;ExcessHet=3.0103;FS=1.722;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.58;ReadPosRankSum=-2.326;SOR=0.551 GT:AD:DP:GQ:PL 0/1:119,110:229:99:2908,0,3416 chr1 209618217 . C T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.108;SOR=0.916 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 209618270 . G A 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.022;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,181 chr1 209622564 . T C 1052.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.494;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=2.367;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.62;ReadPosRankSum=0.181;SOR=1.204 GT:AD:DP:GQ:PL 0/1:36,36:72:99:1081,0,1049 chr1 209622922 . G A 682.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.839;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.97;ReadPosRankSum=-0.926;SOR=0.807 GT:AD:DP:GQ:PL 0/1:16,20:36:99:711,0,560 chr1 209622984 . T A 905.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.660;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.32;ReadPosRankSum=-1.427;SOR=0.776 GT:AD:DP:GQ:PL 0/1:38,30:68:99:934,0,1181 chr1 209625479 . A G 941.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.526;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=2.376;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.96;ReadPosRankSum=1.384;SOR=0.363 GT:AD:DP:GQ:PL 0/1:25,34:59:99:970,0,694 chr1 209625908 . A G 2351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.143;ClippingRankSum=0.000;DP=237;ExcessHet=3.0103;FS=2.962;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.92;ReadPosRankSum=1.256;SOR=0.521 GT:AD:DP:GQ:PL 0/1:141,96:237:99:2380,0,3815 chr1 209630750 . G A 885.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.016;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=1.625;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.26;ReadPosRankSum=-1.230;SOR=0.404 GT:AD:DP:GQ:PL 0/1:18,28:46:99:914,0,546 chr1 209633324 . T C 618.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.043;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=2.638;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.24;ReadPosRankSum=1.179;SOR=1.204 GT:AD:DP:GQ:PL 0/1:43,24:67:99:647,0,1189 chr1 209638250 . T C 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=1.006;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr1 209638484 . A T 2730.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.575;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=0.548;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.32;ReadPosRankSum=0.192;SOR=0.767 GT:AD:DP:GQ:PL 0/1:100,105:205:99:2759,0,2604 chr1 209638541 . T G 3542.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.324;ClippingRankSum=0.000;DP=294;ExcessHet=3.0103;FS=2.562;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.13;ReadPosRankSum=-0.501;SOR=0.560 GT:AD:DP:GQ:PL 0/1:158,134:292:99:3571,0,4321 chr1 209638718 . T C 5821.77 PASS AC=2;AF=1.00;AN=2;DP=176;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.08;SOR=2.071 GT:AD:DP:GQ:PL 1/1:0,176:176:99:5850,528,0 chr1 209650009 . G A 1890.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.563;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=0.553;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.62;ReadPosRankSum=0.975;SOR=0.624 GT:AD:DP:GQ:PL 0/1:98,80:178:99:1919,0,2556 chr1 209650625 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 209650754 . G C 853.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.572;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.34;ReadPosRankSum=-0.265;SOR=2.376 GT:AD:DP:GQ:PL 0/1:16,24:40:99:882,0,490 chr1 209675351 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 209675657 . T C 8138.77 PASS AC=2;AF=1.00;AN=2;DP=249;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.69;SOR=1.307 GT:AD:DP:GQ:PL 1/1:0,249:249:99:8167,748,0 chr1 209676061 . T G 1897.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.66;SOR=2.476 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1926,129,0 chr1 209706914 . T G 1859.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.443;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=1.351;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.38;ReadPosRankSum=-0.175;SOR=0.830 GT:AD:DP:GQ:PL 0/1:74,65:139:99:1888,0,2243 chr1 209723682 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 209732389 . G C 675.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.686;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=9.832;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.79;ReadPosRankSum=-0.567;SOR=2.336 GT:AD:DP:GQ:PL 0/1:27,22:49:99:704,0,710 chr1 209744745 . G A 201.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.471;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=2.398;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.81;ReadPosRankSum=-0.230;SOR=0.223 GT:AD:DP:GQ:PL 0/1:4,8:12:99:230,0,131 chr1 209744806 . G A 225.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=2.077;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.54;ReadPosRankSum=0.178;SOR=0.184 GT:AD:DP:GQ:PL 0/1:9,9:18:99:254,0,254 chr1 209759986 . A G 1262.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.992;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=4.264;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.58;ReadPosRankSum=-0.755;SOR=1.382 GT:AD:DP:GQ:PL 0/1:52,41:93:99:1291,0,1642 chr1 209760195 . A G 3989.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.694;ClippingRankSum=0.000;DP=337;ExcessHet=3.0103;FS=0.825;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.84;ReadPosRankSum=-0.592;SOR=0.626 GT:AD:DP:GQ:PL 0/1:180,157:337:99:4018,0,4997 chr1 209760412 . G C 2990.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.088;ClippingRankSum=0.000;DP=268;ExcessHet=3.0103;FS=2.845;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-1.106;SOR=0.532 GT:AD:DP:GQ:PL 0/1:153,115:268:99:3019,0,4288 chr1 209761686 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 209761937 . A T 73.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:101,9,0 chr1 209762145 . A G 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:63:123,0,63 chr1 209762146 . C A 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:63:123,0,63 chr1 209762433 . A G 2070.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.088;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=2.012;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.70;ReadPosRankSum=-0.579;SOR=0.893 GT:AD:DP:GQ:PL 0/1:82,81:163:99:2099,0,2110 chr1 209763121 . A G 1972.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.962;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=2.343;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.30;ReadPosRankSum=0.115;SOR=0.656 GT:AD:DP:GQ:PL 0/1:52,69:121:99:2001,0,1263 chr1 209763226 . A G 1495.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.810;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=0.830;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.44;ReadPosRankSum=1.052;SOR=0.871 GT:AD:DP:GQ:PL 0/1:39,52:91:99:1524,0,947 chr1 209763286 . G A 981.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.574;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.245;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.18;ReadPosRankSum=-0.616;SOR=0.494 GT:AD:DP:GQ:PL 0/1:16,38:54:99:1010,0,402 chr1 209763328 . C G 688.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.854;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.60;ReadPosRankSum=-0.623;SOR=0.656 GT:AD:DP:GQ:PL 0/1:8,20:28:99:717,0,250 chr1 209763569 . C T 1264.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=2.311;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.45;ReadPosRankSum=-1.368;SOR=0.912 GT:AD:DP:GQ:PL 0/1:68,53:121:99:1293,0,1798 chr1 209766254 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 209777336 . T C 1759.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.410;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=2.904;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.21;ReadPosRankSum=-0.262;SOR=0.950 GT:AD:DP:GQ:PL 0/1:87,70:157:99:1788,0,1747 chr1 209777415 . C G 2522.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.424;ClippingRankSum=0.000;DP=214;ExcessHet=3.0103;FS=9.971;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.84;ReadPosRankSum=0.437;SOR=0.713 GT:AD:DP:GQ:PL 0/1:109,104:213:99:2551,0,3012 chr1 209779520 . C G 283.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.128;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=1.657;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.79;ReadPosRankSum=0.422;SOR=0.346 GT:AD:DP:GQ:PL 0/1:17,12:29:99:312,0,484 chr1 209794974 . A C 727.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.40;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,19:19:57:756,57,0 chr1 209858867 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 209938388 . G A 866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.555;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.74;ReadPosRankSum=0.099;SOR=0.683 GT:AD:DP:GQ:PL 0/1:54,35:89:99:895,0,1745 chr1 210110408 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 210160736 . T C 541.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.461;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=1.194;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.06;ReadPosRankSum=0.238;SOR=0.968 GT:AD:DP:GQ:PL 0/1:27,22:49:99:570,0,708 chr1 210188043 . A G 82.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.79;ReadPosRankSum=0.084;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,4:6:66:111,0,66 chr1 210188057 . G A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=0.623;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,115 chr1 210188116 . G A 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 210189643 . G A 265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.145;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.08;ReadPosRankSum=1.262;SOR=0.859 GT:AD:DP:GQ:PL 0/1:14,8:22:99:294,0,732 chr1 210189644 . C A 265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.145;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.08;ReadPosRankSum=1.348;SOR=0.859 GT:AD:DP:GQ:PL 0/1:14,8:22:99:294,0,732 chr1 210207685 . G C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 210232562 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 210233595 . T C 455.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.320;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=1.586;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.66;ReadPosRankSum=0.430;SOR=0.368 GT:AD:DP:GQ:PL 0/1:21,15:36:99:484,0,655 chr1 210233686 . G T 959.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.484;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=3.239;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.15;ReadPosRankSum=0.174;SOR=0.373 GT:AD:DP:GQ:PL 0/1:39,40:79:99:988,0,1217 chr1 210233994 . T A 622.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.378;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=5.051;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.90;ReadPosRankSum=-1.630;SOR=1.371 GT:AD:DP:GQ:PL 0/1:41,29:70:99:660,0,1103 chr1 210294301 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 210338982 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 210362681 . C T 796.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.514;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=3.262;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.23;ReadPosRankSum=0.582;SOR=1.464 GT:AD:DP:GQ:PL 0/1:29,27:56:99:825,0,941 chr1 210362734 . C G 3210.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.48;SOR=1.656 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3239,305,0 chr1 210363113 . A T 179.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.81;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:208,15,0 chr1 210376548 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 210376555 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 210391789 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 210391878 . C T 58.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:86,9,0 chr1 210391881 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 210400923 . G T 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.63;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 210404529 . G C 2479.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.79;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2508,234,0 chr1 210500865 . C T 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr1 210588118 . G C 3515.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.59;SOR=3.564 GT:AD:DP:GQ:PL 1/1:0,94:94:99:3544,283,0 chr1 210674029 . T C 208.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.246;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.60;ReadPosRankSum=-1.492;SOR=1.136 GT:AD:DP:GQ:PL 0/1:11,7:18:99:237,0,371 chr1 210674172 . T A 1262.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-4.985;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=0.876;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.21;ReadPosRankSum=1.590;SOR=0.527 GT:AD:DP:GQ:PL 0/1:29,54:83:99:1291,0,860 chr1 210683243 . G T 3308.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.51;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3337,314,0 chr1 210683262 . T G 1098.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.682;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=0.742;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.99;ReadPosRankSum=-0.065;SOR=0.838 GT:AD:DP:GQ:PL 0/1:70,40:110:99:1127,0,1796 chr1 210684115 . A G 1949.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.50;SOR=1.688 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1978,180,0 chr1 210778243 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 210797799 . C G 2502.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.045;ClippingRankSum=0.000;DP=186;ExcessHet=3.0103;FS=4.407;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.53;ReadPosRankSum=-0.339;SOR=1.024 GT:AD:DP:GQ:PL 0/1:92,93:185:99:2531,0,2423 chr1 210803774 . G T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 210853602 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 210859936 . T G 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr1 210859975 . G T 178.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.54;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:207,21,0 chr1 210860026 . G C 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 210860071 . T C 122.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:150,12,0 chr1 210860100 . A C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.92;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 210860104 . G T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.74;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 210860801 . T G 336.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:36:365,36,0 chr1 210920004 . A C 3040.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.483;ClippingRankSum=0.000;DP=249;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.21;ReadPosRankSum=-0.922;SOR=0.713 GT:AD:DP:GQ:PL 0/1:141,108:249:99:3069,0,3655 chr1 210920248 . C T 308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.631;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=2.515;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.03;ReadPosRankSum=-0.437;SOR=0.191 GT:AD:DP:GQ:PL 0/1:16,12:28:99:337,0,550 chr1 211019365 . G A 383.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.307;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=2.776;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.84;ReadPosRankSum=0.986;SOR=1.508 GT:AD:DP:GQ:PL 0/1:25,14:39:99:412,0,859 chr1 211082594 . G A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.440;SOR=2.093 GT:AD:DP:GQ:PL 0/1:3,3:6:72:107,0,72 chr1 211103486 . C T 432.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.143;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.36;ReadPosRankSum=0.463;SOR=0.602 GT:AD:DP:GQ:PL 0/1:19,16:35:99:461,0,450 chr1 211260395 . G T 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 211260411 . G A 183.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:212,18,0 chr1 211267692 . G A 259.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.94;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:288,21,0 chr1 211268696 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 211271003 . T C 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 211271040 . G A 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.566;SOR=0.223 GT:AD:DP:GQ:PL 0/1:3,4:7:92:146,0,92 chr1 211274283 . G A 1067.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.105;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.20;ReadPosRankSum=-0.870;SOR=0.666 GT:AD:DP:GQ:PL 0/1:70,46:116:99:1096,0,1726 chr1 211276109 . A G 210.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.62;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:239,18,0 chr1 211278125 . T C 848.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.751;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=2.548;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.89;ReadPosRankSum=0.856;SOR=1.251 GT:AD:DP:GQ:PL 0/1:27,30:57:99:877,0,660 chr1 211279336 . G A 527.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.701;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=2.258;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.60;ReadPosRankSum=0.855;SOR=1.022 GT:AD:DP:GQ:PL 0/1:32,23:55:99:556,0,785 chr1 211279386 . G A 331.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.187;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=4.202;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.48;ReadPosRankSum=-0.165;SOR=1.863 GT:AD:DP:GQ:PL 0/1:23,12:35:99:360,0,638 chr1 211279503 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 211304400 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 211332288 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 211354267 . C A 677.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.13;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,18:18:54:706,54,0 chr1 211354663 . C G 448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.096;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.51;ReadPosRankSum=0.927;SOR=0.399 GT:AD:DP:GQ:PL 0/1:9,14:23:99:477,0,298 chr1 211356227 . T C 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.84;ReadPosRankSum=-1.217;SOR=0.976 GT:AD:DP:GQ:PL 0/1:6,8:14:99:292,0,208 chr1 211356702 . T G 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=0.566;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr1 211372002 . A G 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-0.084;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr1 211417550 . A G 2167.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.84;SOR=1.681 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2196,198,0 chr1 211417793 . T C 2159.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.55;QD=31.30;SOR=1.054 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2188,207,0 chr1 211453632 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 211512779 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 211512868 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 211514479 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 211514590 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 211515183 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 211517289 . T C 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 211517331 . C A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 211549692 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 211599583 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 211619802 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 211619911 . C A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.85;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 211619918 . C T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 211621736 . T A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 211621910 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 211622897 . G A 56.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=14.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:84,12,0 chr1 211632283 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 211639429 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 211639430 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 211642986 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 211643653 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 211649980 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 211650135 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 211660697 . G C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 211663447 . T C 1323.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.105;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=0.745;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=1.074;SOR=0.819 GT:AD:DP:GQ:PL 0/1:51,50:101:99:1352,0,1384 chr1 211664054 . C T 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr1 211667156 . T C 1220.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.421;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.72;ReadPosRankSum=-0.296;SOR=0.740 GT:AD:DP:GQ:PL 0/1:51,45:96:99:1249,0,1471 chr1 211669466 . A C 309.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.42;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:338,27,0 chr1 211673534 . A G 2528.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.619;ClippingRankSum=0.000;DP=209;ExcessHet=3.0103;FS=3.324;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.10;ReadPosRankSum=-2.040;SOR=0.502 GT:AD:DP:GQ:PL 0/1:103,106:209:99:2557,0,2789 chr1 211830758 . C G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 211844590 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 211852963 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 211856330 . G A 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=0.108;SOR=1.492 GT:AD:DP:GQ:PL 0/1:3,4:7:70:112,0,70 chr1 211856874 . C G 702.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.94;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:66:731,66,0 chr1 211862149 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 211862153 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 211878891 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 211889786 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 211924427 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 211924436 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 211931534 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 211936483 . A G 173.82 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.493;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.38;ReadPosRankSum=-0.493;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,8:10:19:202,0,19 chr1 212035692 . G A 1816.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.786;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=1.216;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.92;ReadPosRankSum=0.215;SOR=0.433 GT:AD:DP:GQ:PL 0/1:40,56:96:99:1845,0,1277 chr1 212052001 . T C 286.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.29;QD=28.68;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:30:315,30,0 chr1 212062815 . G T 2658.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.66;SOR=2.103 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2687,236,0 chr1 212066721 . G A 614.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.811;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=6.222;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.64;ReadPosRankSum=-0.441;SOR=2.742 GT:AD:DP:GQ:PL 0/1:23,19:42:99:643,0,766 chr1 212077761 . A G 294.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.80;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:33:323,33,0 chr1 212084465 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 212100297 . C T 2192.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.73;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2221,195,0 chr1 212101071 . A C 2204.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.42;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2233,203,0 chr1 212229652 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 212232450 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 212283001 . G A 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 212297158 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 212302292 . C T 149.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.818;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.831;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.49;ReadPosRankSum=1.119;SOR=1.863 GT:AD:DP:GQ:PL 0/1:14,6:20:99:178,0,452 chr1 212309510 . C T 187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.084;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=4.561;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.88;ReadPosRankSum=0.859;SOR=0.148 GT:AD:DP:GQ:PL 0/1:10,9:19:99:216,0,292 chr1 212326553 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 212328815 . A G 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr1 212342271 . C T 1331.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.133;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=3.834;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.73;ReadPosRankSum=-1.614;SOR=1.100 GT:AD:DP:GQ:PL 0/1:47,50:97:99:1360,0,1088 chr1 212348297 . T G 1136.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.11;SOR=2.765 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1165,96,0 chr1 212352671 . G C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.674;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 212352946 . C T 5011.77 PASS AC=2;AF=1.00;AN=2;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.76;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,153:153:99:5040,459,0 chr1 212356850 . T C 2756.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.54;SOR=1.833 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2785,231,0 chr1 212365557 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 212378308 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 212379769 . G C 1297.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.203;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=1.605;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.02;ReadPosRankSum=-1.635;SOR=0.322 GT:AD:DP:GQ:PL 0/1:31,41:72:99:1326,0,1010 chr1 212385055 . T A 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.253;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr1 212414327 . G A 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=0.060;SOR=0.160 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,179 chr1 212414864 . C G 2664.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.558;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=2.466;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.19;ReadPosRankSum=-0.396;SOR=0.968 GT:AD:DP:GQ:PL 0/1:66,89:155:99:2693,0,1813 chr1 212442533 . T C 1118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.655;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=1.666;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.08;ReadPosRankSum=1.308;SOR=0.925 GT:AD:DP:GQ:PL 0/1:55,46:101:99:1147,0,1521 chr1 212444178 . G T 223.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=0.674;SOR=0.180 GT:AD:DP:GQ:PL 0/1:8,8:16:99:252,0,274 chr1 212444487 . C G 1514.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.232;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=0.794;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.74;ReadPosRankSum=1.651;SOR=0.578 GT:AD:DP:GQ:PL 0/1:74,55:129:99:1543,0,2179 chr1 212445667 . C A 248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.232;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=7.425;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=0.916;SOR=1.706 GT:AD:DP:GQ:PL 0/1:8,11:19:99:277,0,204 chr1 212445997 . T C 3825.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.850;ClippingRankSum=0.000;DP=267;ExcessHet=3.0103;FS=1.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.33;ReadPosRankSum=-0.178;SOR=0.585 GT:AD:DP:GQ:PL 0/1:120,147:267:99:3854,0,2879 chr1 212452386 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 212555047 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 212555055 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 212607015 . G A 55.31 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.44;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:1:81,0,1 chr1 212607019 . C A 55.31 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.44;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:1:81,0,1 chr1 212607058 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 212607611 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 212614864 . G A 1169.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.413;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.895;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.27;ReadPosRankSum=-1.200;SOR=0.536 GT:AD:DP:GQ:PL 0/1:36,46:82:99:1198,0,904 chr1 212625635 . A G 2926.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.198;ClippingRankSum=0.000;DP=178;ExcessHet=3.0103;FS=5.320;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.44;ReadPosRankSum=-0.904;SOR=0.742 GT:AD:DP:GQ:PL 0/1:86,92:178:99:2955,0,2705 chr1 212626528 . A G 11641.77 PASS AC=2;AF=1.00;AN=2;DP=344;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.84;SOR=0.753 GT:AD:DP:GQ:PL 1/1:0,344:344:99:11670,1033,0 chr1 212626607 . C T 3725.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.110;ClippingRankSum=0.000;DP=307;ExcessHet=3.0103;FS=1.903;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.18;ReadPosRankSum=1.830;SOR=0.579 GT:AD:DP:GQ:PL 0/1:156,150:306:99:3754,0,4134 chr1 212650020 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 212696761 . C G 791.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.99;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,24:24:72:820,72,0 chr1 212726969 . G C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 212727145 . A G 1593.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.20;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1622,144,0 chr1 212738494 . T C 1465.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.115;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=1.568;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=1.707;SOR=0.861 GT:AD:DP:GQ:PL 0/1:65,53:118:99:1494,0,1793 chr1 212747452 . C A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 212766506 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 212766518 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 212781889 . A C 256.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.40;ReadPosRankSum=0.381;SOR=1.445 GT:AD:DP:GQ:PL 0/1:4,8:12:99:285,0,131 chr1 212787801 . T C 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-1.345;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr1 212791807 . C A 1704.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.666;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=1.634;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.64;ReadPosRankSum=-0.185;SOR=0.525 GT:AD:DP:GQ:PL 0/1:52,57:109:99:1733,0,1602 chr1 212794529 . G T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 212797033 . A G 1234.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.10;SOR=2.964 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1263,105,0 chr1 212802436 . C T 71.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.602;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=4.393;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.52;ReadPosRankSum=-0.210;SOR=0.061 GT:AD:DP:GQ:PL 0/1:7,4:11:99:100,0,256 chr1 212812124 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=1.645;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:66:110,0,66 chr1 212830030 . A T 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.13;ReadPosRankSum=-1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:95:95,0,107 chr1 212836127 . A G 2815.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.52;SOR=1.939 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2844,252,0 chr1 212840335 . G A 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 212863902 . A G 546.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.445;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=5.958;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=0.204;SOR=2.461 GT:AD:DP:GQ:PL 0/1:24,17:41:99:575,0,787 chr1 212883477 . A G 2635.77 PASS AC=2;AF=1.00;AN=2;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.30;SOR=0.763 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2664,261,0 chr1 212894850 . T C 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.11;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr1 212943822 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 212951423 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.58;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 212988804 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 212996285 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 212996293 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 213007449 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 213008039 . G T 261.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.75;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:290,21,0 chr1 213008574 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.12;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 213010891 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.60;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 213019116 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 213242854 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 213281255 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 213581427 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 213667644 . C G 71.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.108;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.25;ReadPosRankSum=0.000;SOR=1.022 GT:AD:DP:GQ:PL 0/1:3,4:7:70:100,0,70 chr1 213669377 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 213669378 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 213670705 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 213677773 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 213677787 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 213677822 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 213677828 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 214011853 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr1 214052960 . C A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.48;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 214052965 . C T 132.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:160,12,0 chr1 214152762 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 214256878 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 214305116 . G A 1183.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.836;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=0.608;SOR=0.822 GT:AD:DP:GQ:PL 0/1:40,44:84:99:1212,0,1118 chr1 214313996 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 214318193 . G C 1700.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.507;ClippingRankSum=0.000;DP=148;ExcessHet=3.0103;FS=0.610;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.49;ReadPosRankSum=0.733;SOR=0.765 GT:AD:DP:GQ:PL 0/1:76,72:148:99:1729,0,1912 chr1 214318763 . C A 238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.966;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.05;ReadPosRankSum=1.233;SOR=0.223 GT:AD:DP:GQ:PL 0/1:8,9:17:99:267,0,251 chr1 214318943 . G A 2513.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.23;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2542,234,0 chr1 214324518 . G T 548.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.577;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.29;ReadPosRankSum=-1.991;SOR=0.784 GT:AD:DP:GQ:PL 0/1:12,18:30:99:577,0,343 chr1 214327564 . A C 1762.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.722;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=6.142;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.46;ReadPosRankSum=0.937;SOR=1.413 GT:AD:DP:GQ:PL 0/1:73,58:131:99:1791,0,2168 chr1 214327847 . C A 643.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.768;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.33;ReadPosRankSum=-1.199;SOR=1.112 GT:AD:DP:GQ:PL 0/1:22,20:42:99:672,0,724 chr1 214329031 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 214329122 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 214330146 . T G 1432.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.695;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=3.774;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.77;ReadPosRankSum=0.234;SOR=0.935 GT:AD:DP:GQ:PL 0/1:46,51:97:99:1461,0,1043 chr1 214331261 . T C 7388.77 PASS AC=2;AF=1.00;AN=2;DP=224;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.99;SOR=1.652 GT:AD:DP:GQ:PL 1/1:0,224:224:99:7417,672,0 chr1 214332253 . C T 2186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.471;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.20;ReadPosRankSum=-0.418;SOR=0.732 GT:AD:DP:GQ:PL 0/1:76,78:154:99:2215,0,2098 chr1 214332373 . T C 1317.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.90;SOR=4.235 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1346,105,0 chr1 214332409 . T C 254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.115;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=1.896;SOR=0.593 GT:AD:DP:GQ:PL 0/1:9,8:17:99:283,0,261 chr1 214364284 . C T 596.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.020;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.31;ReadPosRankSum=0.000;SOR=0.512 GT:AD:DP:GQ:PL 0/1:10,18:28:99:625,0,333 chr1 214369325 . T C 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 214369476 . T C 3974.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.05;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,124:124:99:4003,372,0 chr1 214372249 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 214376158 . C T 650.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.018;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.49;ReadPosRankSum=0.106;SOR=0.693 GT:AD:DP:GQ:PL 0/1:21,21:42:99:679,0,683 chr1 214377933 . G A 2945.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.66;SOR=2.503 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2974,255,0 chr1 214378283 . C T 493.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.194;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=9.947;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.93;ReadPosRankSum=-0.514;SOR=3.660 GT:AD:DP:GQ:PL 0/1:16,15:31:99:522,0,457 chr1 214383140 . T A 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.72;ReadPosRankSum=-0.414;SOR=0.330 GT:AD:DP:GQ:PL 0/1:3,5:8:99:146,0,100 chr1 214384885 . A G 455.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.55;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:484,42,0 chr1 214390997 . T C 4719.77 PASS AC=2;AF=1.00;AN=2;DP=150;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,150:150:99:4748,449,0 chr1 214391099 . C G 1265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.668;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=10.144;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.82;ReadPosRankSum=-0.212;SOR=0.127 GT:AD:DP:GQ:PL 0/1:35,45:80:99:1294,0,1073 chr1 214393502 . A G 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.33;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 214393609 . A G 2254.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.85;SOR=2.531 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2283,192,0 chr1 214395128 . C A 482.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.78;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:511,39,0 chr1 214401779 . T C 1266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.038;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=0.737;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.18;ReadPosRankSum=-1.283;SOR=0.642 GT:AD:DP:GQ:PL 0/1:57,47:104:99:1295,0,1444 chr1 214402106 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 214402898 . T C 1997.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.414;ClippingRankSum=0.000;DP=214;ExcessHet=3.0103;FS=1.762;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.38;ReadPosRankSum=-0.703;SOR=0.562 GT:AD:DP:GQ:PL 0/1:127,86:213:99:2026,0,3455 chr1 214403011 . T C 2509.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.883;ClippingRankSum=0.000;DP=230;ExcessHet=3.0103;FS=0.497;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.91;ReadPosRankSum=-1.134;SOR=0.751 GT:AD:DP:GQ:PL 0/1:133,97:230:99:2538,0,3306 chr1 214403170 . C T 408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.754;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.05;ReadPosRankSum=-1.226;SOR=1.739 GT:AD:DP:GQ:PL 0/1:5,12:17:99:437,0,145 chr1 214452088 . A G 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.56;ReadPosRankSum=0.799;SOR=0.269 GT:AD:DP:GQ:PL 0/1:8,4:12:99:131,0,298 chr1 214464539 . A G 1263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.191;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=6.926;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=0.679;SOR=0.100 GT:AD:DP:GQ:PL 0/1:39,42:81:99:1292,0,1307 chr1 214464829 . C T 5383.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.018;ClippingRankSum=0.000;DP=425;ExcessHet=3.0103;FS=1.182;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=0.099;SOR=0.587 GT:AD:DP:GQ:PL 0/1:215,208:423:99:5412,0,5552 chr1 214464976 . T C 437.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.271;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.24;ReadPosRankSum=0.981;SOR=0.340 GT:AD:DP:GQ:PL 0/1:10,14:24:99:466,0,308 chr1 214465004 . A G 188.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.748;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.16;ReadPosRankSum=0.275;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:217,0,143 chr1 214482911 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.89;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 214482916 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.89;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 214482924 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.89;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 214482925 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.89;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 214482934 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.70;QD=36.53;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 214482955 . C T 83.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.70;QD=27.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:111,9,0 chr1 214482990 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.70;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 214483019 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.64;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 214483070 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 214483157 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 214483183 . T C 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.86;ReadPosRankSum=0.480;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:99:108,0,243 chr1 214483184 . G A 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.86;ReadPosRankSum=0.480;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:99:108,0,243 chr1 214483232 . C T 237.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.891;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=1.810;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.91;ReadPosRankSum=-1.217;SOR=0.292 GT:AD:DP:GQ:PL 0/1:13,11:24:99:266,0,386 chr1 214483325 . G C 1777.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=0.645;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.46;MQRankSum=-0.109;QD=29.19;ReadPosRankSum=1.261;SOR=0.283 GT:AD:DP:GQ:PL 1/1:1,43:44:87:1806,87,0 chr1 214483326 . C T 1777.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=0.637;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.43;MQRankSum=-0.110;QD=28.42;ReadPosRankSum=1.371;SOR=0.262 GT:AD:DP:GQ:PL 1/1:1,42:43:87:1806,87,0 chr1 214483397 . A G 119.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.179;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.41;MQRankSum=-1.660;QD=3.74;ReadPosRankSum=-2.058;SOR=0.793 GT:AD:DP:GQ:PL 0/1:24,8:32:99:148,0,668 chr1 214483951 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 214483988 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 214491617 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 214493107 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 214494277 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 214613787 . G A 1950.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.63;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1979,174,0 chr1 214641228 . C T 1423.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1452,129,0 chr1 214645108 . G A 782.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.743;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=3.526;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.04;ReadPosRankSum=-1.098;SOR=1.229 GT:AD:DP:GQ:PL 0/1:39,26:65:99:811,0,1168 chr1 214646756 . A G 1638.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.69;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1667,132,0 chr1 214653645 . A C 210.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.83;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:239,18,0 chr1 214663867 . T C 627.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.65;ReadPosRankSum=0.161;SOR=1.255 GT:AD:DP:GQ:PL 0/1:11,18:29:99:656,0,368 chr1 214697482 . G A 100.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.18;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:129,15,0 chr1 214781596 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 214781610 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 214789413 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 214789428 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 214800514 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 215054657 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 215054667 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 215066553 . T C 598.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.70;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:627,45,0 chr1 215083545 . G A 99.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.765;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.09;ReadPosRankSum=-0.241;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:128,0,182 chr1 215086809 . A T 431.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.188;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.61;ReadPosRankSum=-0.697;SOR=0.420 GT:AD:DP:GQ:PL 0/1:12,14:26:99:460,0,389 chr1 215195171 . A G 1037.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.093;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.96;ReadPosRankSum=-0.257;SOR=0.876 GT:AD:DP:GQ:PL 0/1:20,32:52:99:1066,0,611 chr1 215222101 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 215234714 . G T 241.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.805;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=4.260;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.07;ReadPosRankSum=0.640;SOR=0.076 GT:AD:DP:GQ:PL 0/1:15,9:24:99:270,0,554 chr1 215567710 . T G 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.100;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=2.017;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.83;ReadPosRankSum=0.527;SOR=0.293 GT:AD:DP:GQ:PL 0/1:10,9:19:99:253,0,290 chr1 215580012 . T G 676.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.664;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=2.325;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.67;ReadPosRankSum=-0.061;SOR=1.134 GT:AD:DP:GQ:PL 0/1:44,26:70:99:705,0,1180 chr1 215608232 . A G 947.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.072;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.04;ReadPosRankSum=0.848;SOR=0.714 GT:AD:DP:GQ:PL 0/1:29,34:63:99:976,0,818 chr1 215620492 . G A 1632.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.098;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=0.692;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.20;ReadPosRankSum=-1.633;SOR=0.796 GT:AD:DP:GQ:PL 0/1:56,59:115:99:1661,0,1456 chr1 215674720 . C T 2375.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.409;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=5.648;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.14;ReadPosRankSum=1.697;SOR=1.139 GT:AD:DP:GQ:PL 0/1:83,85:168:99:2404,0,2428 chr1 215675245 . T C 1011.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.239;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=0.750;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.54;ReadPosRankSum=0.597;SOR=0.819 GT:AD:DP:GQ:PL 0/1:65,41:106:99:1040,0,1878 chr1 215675299 . T C 941.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.099;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=2.886;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.46;ReadPosRankSum=-0.580;SOR=0.842 GT:AD:DP:GQ:PL 0/1:56,34:90:99:970,0,1766 chr1 215675702 . C G 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.550;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.25;ReadPosRankSum=0.998;SOR=0.527 GT:AD:DP:GQ:PL 0/1:6,5:11:99:174,0,171 chr1 215680015 . G A 2401.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.90;SOR=1.103 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2430,222,0 chr1 215680493 . A G 1325.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.71;SOR=4.743 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1354,99,0 chr1 215680558 . G C 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.99;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr1 215733129 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 215733213 . G A 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr1 215796565 . T C 100.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.18;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:129,15,0 chr1 215877945 . A G 3412.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.17;SOR=2.535 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3441,286,0 chr1 215879207 . A G 359.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.311;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=7.164;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.41;ReadPosRankSum=0.402;SOR=0.054 GT:AD:DP:GQ:PL 0/1:16,13:29:99:388,0,581 chr1 215900053 . G A 1029.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.286;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.53;ReadPosRankSum=1.916;SOR=0.729 GT:AD:DP:GQ:PL 0/1:67,41:108:99:1058,0,1795 chr1 215900163 . C T 1239.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.794;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=2.408;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.60;ReadPosRankSum=0.585;SOR=0.479 GT:AD:DP:GQ:PL 0/1:66,51:117:99:1268,0,1658 chr1 215970606 . T C 1490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.597;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.74;ReadPosRankSum=-0.322;SOR=0.746 GT:AD:DP:GQ:PL 0/1:66,61:127:99:1519,0,1730 chr1 215999038 . A G 494.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.10;SOR=1.739 GT:AD:DP:GQ:PL 1/1:0,17:17:51:523,51,0 chr1 216175422 . C T 3310.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.23;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,106:106:99:3339,318,0 chr1 216196788 . T G 1295.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.93;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1324,111,0 chr1 216198451 . A G 1734.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.338;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.70;ReadPosRankSum=0.323;SOR=0.633 GT:AD:DP:GQ:PL 0/1:51,67:118:99:1763,0,1231 chr1 216217352 . C T 2362.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.37;SOR=1.810 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2391,219,0 chr1 216293326 . T A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 216369880 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 216374233 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 216418661 . T C 495.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.577;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=1.153;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.55;ReadPosRankSum=-0.223;SOR=1.022 GT:AD:DP:GQ:PL 0/1:25,22:47:99:524,0,653 chr1 216421964 . C T 1128.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.827;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.05;ReadPosRankSum=-0.458;SOR=0.776 GT:AD:DP:GQ:PL 0/1:31,44:75:99:1157,0,865 chr1 216519327 . C T 5539.77 PASS AC=2;AF=1.00;AN=2;DP=178;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.12;SOR=1.026 GT:AD:DP:GQ:PL 1/1:0,178:178:99:5568,534,0 chr1 216567972 . C T 2622.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.545;ClippingRankSum=0.000;DP=194;ExcessHet=3.0103;FS=0.528;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.52;ReadPosRankSum=-1.172;SOR=0.756 GT:AD:DP:GQ:PL 0/1:92,102:194:99:2651,0,2404 chr1 216644849 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 216677731 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 216723102 . A G 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.65;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr1 216723199 . G C 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.159;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=9.379;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.08;ReadPosRankSum=1.666;SOR=3.407 GT:AD:DP:GQ:PL 0/1:17,5:22:99:140,0,998 chr1 216723209 . G C 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.479;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=9.161;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.34;ReadPosRankSum=2.716;SOR=3.442 GT:AD:DP:GQ:PL 0/1:21,5:26:99:115,0,1510 chr1 216723212 . G C 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.000;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=12.366;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.61;ReadPosRankSum=2.264;SOR=3.611 GT:AD:DP:GQ:PL 0/1:26,5:31:99:109,0,1539 chr1 216802133 . C G 65.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:93,9,0 chr1 216864717 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 217133631 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 217173444 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 217173454 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 217356849 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 217431435 . G A 425.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.258;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.64;ReadPosRankSum=1.269;SOR=0.501 GT:AD:DP:GQ:PL 0/1:23,17:40:99:454,0,570 chr1 217498429 . C G 968.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.506;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=1.842;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.11;ReadPosRankSum=0.404;SOR=0.914 GT:AD:DP:GQ:PL 0/1:46,34:80:99:997,0,1306 chr1 217515066 . C T 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=1.559;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,221 chr1 217610468 . C T 937.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.934;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=2.534;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.43;ReadPosRankSum=1.092;SOR=1.218 GT:AD:DP:GQ:PL 0/1:33,32:65:99:966,0,938 chr1 217610544 . C G 364.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.517;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=3.222;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.58;ReadPosRankSum=-0.800;SOR=2.636 GT:AD:DP:GQ:PL 0/1:11,11:22:99:393,0,293 chr1 217630983 . G A 2835.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.090;ClippingRankSum=0.000;DP=245;ExcessHet=3.0103;FS=0.465;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.57;ReadPosRankSum=-0.053;SOR=0.655 GT:AD:DP:GQ:PL 0/1:126,119:245:99:2864,0,3253 chr1 217631293 . T C 1728.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.370;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=0.604;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.61;ReadPosRankSum=-2.914;SOR=0.765 GT:AD:DP:GQ:PL 0/1:92,71:163:99:1757,0,2592 chr1 217631613 . T C 536.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.727;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=3.259;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.91;ReadPosRankSum=0.442;SOR=0.166 GT:AD:DP:GQ:PL 0/1:19,17:36:99:565,0,673 chr1 217668787 . A G 301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.229;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=1.545;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.14;ReadPosRankSum=0.245;SOR=1.244 GT:AD:DP:GQ:PL 0/1:20,13:33:99:330,0,498 chr1 217669233 . C A 253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.211;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.10;ReadPosRankSum=0.146;SOR=0.551 GT:AD:DP:GQ:PL 0/1:8,10:18:99:282,0,280 chr1 217683461 . T C 270.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.391;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.83;ReadPosRankSum=1.401;SOR=1.148 GT:AD:DP:GQ:PL 0/1:15,10:25:99:299,0,518 chr1 217741982 . C T 365.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.682;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=3.145;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.16;ReadPosRankSum=0.357;SOR=1.496 GT:AD:DP:GQ:PL 0/1:22,14:36:99:394,0,578 chr1 217742251 . G A 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.976;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.43;ReadPosRankSum=-0.748;SOR=0.527 GT:AD:DP:GQ:PL 0/1:6,5:11:99:110,0,184 chr1 217774396 . G A 843.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.404;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.950;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.18;ReadPosRankSum=-0.258;SOR=0.560 GT:AD:DP:GQ:PL 0/1:31,33:64:99:872,0,784 chr1 217801947 . C T 70.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.86;ReadPosRankSum=-0.967;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:99:99,0,192 chr1 217836412 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 217836432 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 217836457 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 217925034 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 217968390 . A C 105.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 217983341 . T C 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=-0.189;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,117 chr1 218017891 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 218020751 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 218020854 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 218126560 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 218126566 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 218190573 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 218221420 . T A 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr1 218272320 . C A 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 218285209 . T C 1231.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.58;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1260,84,0 chr1 218345918 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 218391628 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 218391635 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 218411610 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 218510186 . A G 278.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.330;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.688;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.91;ReadPosRankSum=0.097;SOR=1.911 GT:AD:DP:GQ:PL 0/1:6,8:14:99:307,0,311 chr1 218510194 . A G 278.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.536;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.688;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.91;ReadPosRankSum=-0.736;SOR=1.911 GT:AD:DP:GQ:PL 0/1:6,8:14:99:307,0,311 chr1 218525386 . G A 947.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.488;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.35;ReadPosRankSum=-0.107;SOR=0.784 GT:AD:DP:GQ:PL 0/1:36,35:71:99:976,0,972 chr1 218552409 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 218881939 . C A 205.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.72;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:234,24,0 chr1 218882658 . C T 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.68;ReadPosRankSum=-0.108;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,3:7:68:68,0,78 chr1 219008135 . A T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 219200072 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 219210525 . T C 2369.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.44;SOR=1.961 GT:AD:DP:GQ:PL 1/1:0,57:57:99:2398,171,0 chr1 219210563 . A G 1974.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.37;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2003,183,0 chr1 219313856 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 219313894 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 219313902 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 219479347 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 219479352 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 219533086 . T C 4137.77 PASS AC=2;AF=1.00;AN=2;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.11;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,133:133:99:4166,398,0 chr1 219609805 . A G 1895.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.583;ClippingRankSum=0.000;DP=359;ExcessHet=3.0103;FS=1.432;MLEAC=1;MLEAF=0.500;MQ=43.50;MQRankSum=0.831;QD=5.33;ReadPosRankSum=-1.682;SOR=0.595 GT:AD:DP:GQ:PL 0/1:259,97:356:99:1924,0,7153 chr1 219611745 . A G 908.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=1.932;MLEAC=1;MLEAF=0.500;MQ=43.69;MQRankSum=-0.334;QD=11.36;ReadPosRankSum=1.100;SOR=0.479 GT:AD:DP:GQ:PL 0/1:39,41:80:99:937,0,912 chr1 219671658 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 219683049 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 219759305 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 219865919 . A T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=45.30;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 219927666 . A C 344.19 PASS AC=1;AF=0.500;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;QD=34.42;SOR=4.615 GT:AD:DP:GQ:PL 0/1:1,9:10:7:376,0,7 chr1 219972029 . T G 264.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.42;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:293,27,0 chr1 219972295 . A G 491.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.74;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:48:520,48,0 chr1 219979779 . G A 138.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:166,12,0 chr1 219981260 . T C 273.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.22;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:302,24,0 chr1 219981426 . C T 2552.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.76;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2581,249,0 chr1 219982748 . T C 3763.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.85;SOR=1.028 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3792,366,0 chr1 219986920 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 219987018 . A G 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.736;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.29;ReadPosRankSum=0.667;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,7:13:99:253,0,199 chr1 219987091 . A G 1308.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.16;SOR=1.900 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1337,125,0 chr1 219988409 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 219988517 . C G 261.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.477;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=4.218;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.44;ReadPosRankSum=-0.264;SOR=1.755 GT:AD:DP:GQ:PL 0/1:21,10:31:99:290,0,614 chr1 219988853 . T C 436.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.953;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=-0.270;SOR=0.627 GT:AD:DP:GQ:PL 0/1:16,15:31:99:465,0,541 chr1 220001390 . C T 148.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.88;ReadPosRankSum=0.200;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:177,0,177 chr1 220005980 . A T 932.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.93;SOR=6.358 GT:AD:DP:GQ:PL 1/1:0,23:23:69:961,69,0 chr1 220010734 . C T 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:59:59,0,72 chr1 220015062 . G T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 220015094 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 220016450 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 220019153 . C G 1777.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.25;SOR=2.880 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1806,147,0 chr1 220019873 . T A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:70:71,0,70 chr1 220024108 . C T 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.414;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,184 chr1 220024203 . C T 1114.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.34;SOR=3.841 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1143,87,0 chr1 220024283 . G T 2068.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.34;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2097,198,0 chr1 220030254 . T C 155.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.296;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.65;ReadPosRankSum=-0.707;SOR=0.255 GT:AD:DP:GQ:PL 0/1:12,6:18:99:184,0,447 chr1 220032362 . T A 841.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.153;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=2.859;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.51;ReadPosRankSum=3.174;SOR=0.311 GT:AD:DP:GQ:PL 0/1:26,32:58:99:870,0,693 chr1 220032601 . G A 1010.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.78;SOR=4.332 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1039,81,0 chr1 220032638 . A C 438.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.50;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:467,36,0 chr1 220033348 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 220033675 . C T 1840.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.09;SOR=1.567 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1869,162,0 chr1 220034707 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 220034812 . C A 1340.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.36;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1369,108,0 chr1 220035150 . T C 502.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.99;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:531,39,0 chr1 220066106 . T C 1372.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.587;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=1.967;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.96;ReadPosRankSum=-0.275;SOR=1.030 GT:AD:DP:GQ:PL 0/1:34,52:86:99:1401,0,859 chr1 220067520 . A G 158.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.519;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.21;ReadPosRankSum=0.483;SOR=0.859 GT:AD:DP:GQ:PL 0/1:6,7:13:99:187,0,178 chr1 220073754 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 220102036 . G A 408.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.06;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:35:437,35,0 chr1 220102962 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 220134768 . G T 123.90 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.78;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,5:5:14:161,14,0 chr1 220145768 . A G 847.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.30;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:876,63,0 chr1 220147681 . A G 2608.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.81;SOR=1.697 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2637,246,0 chr1 220157977 . T G 2563.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.45;SOR=1.996 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2592,237,0 chr1 220159210 . C T 649.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.96;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:678,51,0 chr1 220159534 . G A 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.17;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 220162088 . A G 335.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.01;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:364,27,0 chr1 220202611 . A T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 220206161 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 220227667 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 220227692 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 220232949 . A G 845.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.83;SOR=2.215 GT:AD:DP:GQ:PL 1/1:0,25:25:75:874,75,0 chr1 220253484 . G A 205.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.31;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:234,18,0 chr1 220253701 . A C 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=8.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.40;ReadPosRankSum=0.366;SOR=2.215 GT:AD:DP:GQ:PL 0/1:5,2:7:66:66,0,188 chr1 220253713 . T C 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.79;ReadPosRankSum=-0.524;SOR=2.225 GT:AD:DP:GQ:PL 0/1:4,2:6:69:69,0,149 chr1 220253734 . G A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.72;ReadPosRankSum=0.619;SOR=2.303 GT:AD:DP:GQ:PL 0/1:6,2:8:66:66,0,246 chr1 220253740 . T G 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.732;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.86;ReadPosRankSum=-0.241;SOR=1.179 GT:AD:DP:GQ:PL 0/1:6,3:9:99:108,0,243 chr1 220253743 . G A 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.732;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.86;ReadPosRankSum=0.015;SOR=1.179 GT:AD:DP:GQ:PL 0/1:6,3:9:99:108,0,243 chr1 220253746 . G A 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.732;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.86;ReadPosRankSum=0.120;SOR=1.179 GT:AD:DP:GQ:PL 0/1:6,3:9:99:108,0,243 chr1 220253803 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.820;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=13.409;MLEAC=1;MLEAF=0.500;MQ=59.34;MQRankSum=-2.240;QD=2.34;ReadPosRankSum=0.106;SOR=0.817 GT:AD:DP:GQ:PL 0/1:17,3:20:75:75,0,607 chr1 220253815 . G A 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.638;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=7.129;MLEAC=1;MLEAF=0.500;MQ=58.88;MQRankSum=-3.069;QD=3.47;ReadPosRankSum=-0.610;SOR=0.054 GT:AD:DP:GQ:PL 0/1:19,4:23:99:108,0,825 chr1 220253818 . G A 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.711;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=7.465;MLEAC=1;MLEAF=0.500;MQ=58.93;MQRankSum=-3.150;QD=3.32;ReadPosRankSum=-0.388;SOR=0.048 GT:AD:DP:GQ:PL 0/1:20,4:24:99:108,0,825 chr1 220253830 . G C 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.393;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=6.308;MLEAC=1;MLEAF=0.500;MQ=58.97;MQRankSum=-3.228;QD=3.07;ReadPosRankSum=-1.150;SOR=0.074 GT:AD:DP:GQ:PL 0/1:21,4:25:99:105,0,665 chr1 220254056 . T G 97.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.579;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=4.326;MLEAC=1;MLEAF=0.500;MQ=59.32;MQRankSum=-5.884;QD=2.13;ReadPosRankSum=-0.336;SOR=1.745 GT:AD:DP:GQ:PL 0/1:41,5:46:99:126,0,2032 chr1 220254615 . A G 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.44;QD=31.23;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 220300467 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 220386450 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 220386498 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 220400149 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 220434343 . G A 1300.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.944;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.84;ReadPosRankSum=1.474;SOR=0.648 GT:AD:DP:GQ:PL 0/1:45,49:94:99:1329,0,1276 chr1 220434549 . A G 3170.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=1.116 GT:AD:DP:GQ:PL 1/1:0,88:88:99:3199,264,0 chr1 220441791 . A C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 220455860 . A G 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr1 220475747 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 220488983 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 220581220 . A G 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.40;ReadPosRankSum=-0.792;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:101,0,171 chr1 220590186 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 220600043 . A G 524.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.136;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.44;ReadPosRankSum=-0.441;SOR=0.368 GT:AD:DP:GQ:PL 0/1:11,16:27:99:553,0,346 chr1 220604339 . T A 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=1.068;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,178 chr1 220615894 . C T 461.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.78;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,15:15:45:490,45,0 chr1 220616098 . T C 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.589;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.75;ReadPosRankSum=-0.231;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:170,0,140 chr1 220618387 . G T 1820.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.290;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=1.321;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.39;ReadPosRankSum=1.288;SOR=0.547 GT:AD:DP:GQ:PL 0/1:71,76:147:99:1849,0,1920 chr1 220627517 . G A 68.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.718;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.73;ReadPosRankSum=-0.799;SOR=0.223 GT:AD:DP:GQ:PL 0/1:8,4:12:97:97,0,264 chr1 220631109 . G A 1047.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.025;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=0.826;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.47;ReadPosRankSum=1.052;SOR=0.824 GT:AD:DP:GQ:PL 0/1:44,40:84:99:1076,0,1131 chr1 220631149 . A G 1031.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.464;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=2.030;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.33;ReadPosRankSum=-0.243;SOR=0.963 GT:AD:DP:GQ:PL 0/1:33,39:72:99:1060,0,886 chr1 220635579 . T C 1196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.210;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=0.635;SOR=0.630 GT:AD:DP:GQ:PL 0/1:54,46:100:99:1225,0,1376 chr1 220641645 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 220650867 . T C 1458.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.308;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.913;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.20;ReadPosRankSum=0.243;SOR=0.542 GT:AD:DP:GQ:PL 0/1:41,55:96:99:1487,0,1204 chr1 220650973 . T C 134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.98;ReadPosRankSum=-0.711;SOR=0.260 GT:AD:DP:GQ:PL 0/1:10,5:15:99:163,0,373 chr1 220652181 . A G 1424.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.801;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=2.421;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.40;ReadPosRankSum=0.504;SOR=0.468 GT:AD:DP:GQ:PL 0/1:81,56:137:99:1453,0,2388 chr1 220674454 . A G 41.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:69,6,0 chr1 220692676 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 220703011 . A T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 220707328 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 220707419 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 220707455 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 220727054 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 220742493 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 220748603 . G C 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.257;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.76;ReadPosRankSum=1.655;SOR=0.693 GT:AD:DP:GQ:PL 0/1:18,8:26:99:256,0,531 chr1 220754429 . C T 919.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.471;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-1.703;SOR=0.657 GT:AD:DP:GQ:PL 0/1:46,40:86:99:948,0,1182 chr1 220761460 . A C 186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=-1.335;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:215,0,202 chr1 220761739 . G A 1776.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.749;ClippingRankSum=0.000;DP=148;ExcessHet=3.0103;FS=2.971;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.01;ReadPosRankSum=-0.241;SOR=0.461 GT:AD:DP:GQ:PL 0/1:82,66:148:99:1805,0,2116 chr1 220763226 . G A 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.11;ReadPosRankSum=-1.465;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:134,0,104 chr1 220786795 . C G 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=0.967;SOR=0.180 GT:AD:DP:GQ:PL 0/1:2,5:7:63:120,0,63 chr1 220788453 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 220791744 . G C 1426.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.420;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=1.948;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=0.930;SOR=0.479 GT:AD:DP:GQ:PL 0/1:61,50:111:99:1455,0,1914 chr1 220796686 . A G 2375.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.151;ClippingRankSum=0.000;DP=191;ExcessHet=3.0103;FS=4.152;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.57;ReadPosRankSum=-0.004;SOR=0.467 GT:AD:DP:GQ:PL 0/1:99,90:189:99:2404,0,2750 chr1 220801203 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 220801247 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 220813174 . C G 977.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.396;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.95;ReadPosRankSum=-0.185;SOR=0.593 GT:AD:DP:GQ:PL 0/1:19,30:49:99:1006,0,579 chr1 220879901 . G C 270.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.628;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.73;ReadPosRankSum=1.568;SOR=0.551 GT:AD:DP:GQ:PL 0/1:18,13:31:99:299,0,556 chr1 220880203 . T C 1465.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.591;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.97;ReadPosRankSum=0.746;SOR=0.725 GT:AD:DP:GQ:PL 0/1:60,53:113:99:1494,0,1577 chr1 220881419 . C G 900.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.976;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=4.388;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.38;ReadPosRankSum=0.527;SOR=1.532 GT:AD:DP:GQ:PL 0/1:26,29:55:99:929,0,682 chr1 220893761 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 221033928 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 221040655 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 221123784 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 221123789 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 221263291 . T G 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=-0.967;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,81 chr1 221298462 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 221333799 . C T 1080.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1109,93,0 chr1 221335819 . G C 513.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.37;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:542,39,0 chr1 221390689 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 221624344 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 221657672 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.28;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 221657684 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.30;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 221702880 . C T 595.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.65;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:624,45,0 chr1 221739019 . T C 2610.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.318;ClippingRankSum=0.000;DP=186;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.04;ReadPosRankSum=-0.420;SOR=0.724 GT:AD:DP:GQ:PL 0/1:87,99:186:99:2639,0,2083 chr1 221739242 . G A 2817.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.553;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=2.444;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.61;ReadPosRankSum=-0.804;SOR=0.884 GT:AD:DP:GQ:PL 0/1:103,104:207:99:2846,0,3025 chr1 221739466 . T C 3335.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.472;ClippingRankSum=0.000;DP=219;ExcessHet=3.0103;FS=1.040;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.23;ReadPosRankSum=0.600;SOR=0.773 GT:AD:DP:GQ:PL 0/1:97,122:219:99:3364,0,2633 chr1 221853848 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 221906423 . T A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 222190961 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 222341489 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222341498 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222410446 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 222445892 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 222447629 . C A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 222464176 . A C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 222468242 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 222472615 . C G 186.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:215,15,0 chr1 222473053 . G T 82.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.68;MQRankSum=-0.319;QD=20.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:111,0,30 chr1 222473631 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 222474464 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.50;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 222475999 . A C 512.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.32;QD=35.25;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:42:541,42,0 chr1 222476149 . C G 368.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.160;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=1.412;MLEAC=1;MLEAF=0.500;MQ=51.10;MQRankSum=0.535;QD=11.90;ReadPosRankSum=0.594;SOR=1.112 GT:AD:DP:GQ:PL 0/1:16,15:31:99:397,0,423 chr1 222477192 . T C 216.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.111;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.447;MLEAC=1;MLEAF=0.500;MQ=56.15;MQRankSum=-2.352;QD=14.45;ReadPosRankSum=-0.227;SOR=0.169 GT:AD:DP:GQ:PL 0/1:7,8:15:99:245,0,247 chr1 222531769 . G A 189.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.64;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:218,18,0 chr1 222531928 . T C 996.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.020;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.24;ReadPosRankSum=0.414;SOR=0.501 GT:AD:DP:GQ:PL 0/1:31,39:70:99:1025,0,778 chr1 222532204 . G A 54.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.91;ReadPosRankSum=-1.845;SOR=0.105 GT:AD:DP:GQ:PL 0/1:11,3:14:83:83,0,417 chr1 222534508 . C T 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr1 222538244 . G A 52.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:80,9,0 chr1 222538423 . C T 38.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=0.000;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:35:67,0,35 chr1 222539012 . C T 428.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.839;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.79;ReadPosRankSum=0.171;SOR=0.616 GT:AD:DP:GQ:PL 0/1:15,14:29:99:457,0,471 chr1 222539751 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 222539866 . G A 364.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.762;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.20;ReadPosRankSum=-2.398;SOR=0.693 GT:AD:DP:GQ:PL 0/1:12,12:24:99:393,0,429 chr1 222540161 . C G 3161.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.049;ClippingRankSum=0.000;DP=251;ExcessHet=3.0103;FS=2.154;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.60;ReadPosRankSum=-1.580;SOR=0.865 GT:AD:DP:GQ:PL 0/1:136,115:251:99:3190,0,3780 chr1 222540289 . G C 3261.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.450;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.00;ReadPosRankSum=0.990;SOR=0.687 GT:AD:DP:GQ:PL 0/1:119,114:233:99:3290,0,3492 chr1 222540408 . G A 1801.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.159;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=0.679;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.06;ReadPosRankSum=0.151;SOR=0.573 GT:AD:DP:GQ:PL 0/1:69,69:138:99:1830,0,1854 chr1 222541905 . A G 281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.65;ReadPosRankSum=-0.458;SOR=0.693 GT:AD:DP:GQ:PL 0/1:9,9:18:99:310,0,310 chr1 222543790 . C T 4504.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.241;ClippingRankSum=0.000;DP=327;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.78;ReadPosRankSum=1.000;SOR=0.694 GT:AD:DP:GQ:PL 0/1:160,167:327:99:4533,0,4485 chr1 222544356 . T C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=1.036;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,108 chr1 222547946 . C T 7544.77 PASS AC=2;AF=1.00;AN=2;DP=238;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.83;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,237:237:99:7573,711,0 chr1 222548331 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 222561461 . G C 920.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.346;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.96;ReadPosRankSum=0.698;SOR=0.651 GT:AD:DP:GQ:PL 0/1:39,38:77:99:949,0,1089 chr1 222563147 . A G 698.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.104;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.26;ReadPosRankSum=0.895;SOR=0.527 GT:AD:DP:GQ:PL 0/1:24,25:49:99:727,0,695 chr1 222563923 . G T 1699.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.33;SOR=1.436 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1728,153,0 chr1 222564226 . C T 502.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.93;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:531,39,0 chr1 222569334 . T C 2670.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.38;SOR=1.310 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2699,240,0 chr1 222577692 . T C 627.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.795;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.66;ReadPosRankSum=0.958;SOR=0.693 GT:AD:DP:GQ:PL 0/1:37,28:65:99:656,0,990 chr1 222585532 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 222585665 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 222588307 . C A 1025.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.72;SOR=6.593 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1054,78,0 chr1 222620890 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 222624764 . G A 1882.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.10;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1911,201,0 chr1 222628664 . A G 2699.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.92;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2728,246,0 chr1 222629034 . A G 2209.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.209;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=1.764;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.73;ReadPosRankSum=-1.081;SOR=0.544 GT:AD:DP:GQ:PL 0/1:118,88:206:99:2238,0,3272 chr1 222629461 . T G 1261.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.548;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.02;ReadPosRankSum=-1.321;SOR=0.782 GT:AD:DP:GQ:PL 0/1:45,45:90:99:1290,0,1243 chr1 222629584 . C T 2803.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.19;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2832,246,0 chr1 222629862 . A G 2014.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.157;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=3.862;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.71;ReadPosRankSum=-1.314;SOR=0.817 GT:AD:DP:GQ:PL 0/1:74,73:147:99:2043,0,1965 chr1 222632356 . T G 931.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.170;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=2.235;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.33;ReadPosRankSum=-1.085;SOR=0.404 GT:AD:DP:GQ:PL 0/1:32,33:65:99:960,0,925 chr1 222632876 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 222641495 . G T 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.402;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=4.738;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.14;ReadPosRankSum=-0.869;SOR=2.165 GT:AD:DP:GQ:PL 0/1:9,11:20:99:331,0,248 chr1 222645879 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 222646534 . A G 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.16;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 222647869 . C T 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.284;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.99;ReadPosRankSum=0.142;SOR=1.022 GT:AD:DP:GQ:PL 0/1:16,5:21:99:112,0,463 chr1 222650187 . A C 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=1.150;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr1 222650401 . T G 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.286;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.218;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.10;ReadPosRankSum=-1.106;SOR=1.508 GT:AD:DP:GQ:PL 0/1:11,6:17:99:115,0,364 chr1 222651746 . C G 272.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.80;ReadPosRankSum=0.718;SOR=1.802 GT:AD:DP:GQ:PL 0/1:3,8:11:92:301,0,92 chr1 222652061 . G A 825.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.41;SOR=1.519 GT:AD:DP:GQ:PL 1/1:0,24:24:72:854,72,0 chr1 222652375 . T C 645.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.225;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.115;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.18;ReadPosRankSum=-0.558;SOR=0.880 GT:AD:DP:GQ:PL 0/1:28,25:53:99:674,0,794 chr1 222652419 . G A 1323.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.09;SOR=2.419 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1352,120,0 chr1 222653139 . G A 957.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.726;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=3.314;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=0.156;SOR=0.393 GT:AD:DP:GQ:PL 0/1:36,33:69:99:986,0,1036 chr1 222653505 . A T 137.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:165,12,0 chr1 222658953 . T C 511.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.063;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=4.396;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.12;ReadPosRankSum=1.144;SOR=1.792 GT:AD:DP:GQ:PL 0/1:22,17:39:99:540,0,609 chr1 222660436 . A G 804.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.277;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=2.599;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.12;ReadPosRankSum=0.471;SOR=0.343 GT:AD:DP:GQ:PL 0/1:28,29:57:99:833,0,782 chr1 222663654 . A G 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.85;ReadPosRankSum=0.135;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,2:8:59:59,0,227 chr1 222664252 . G A 313.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.290;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=2.551;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.07;ReadPosRankSum=-2.568;SOR=0.180 GT:AD:DP:GQ:PL 0/1:15,11:26:99:342,0,514 chr1 222664597 . G A 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr1 222664874 . C T 754.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.95;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,27:27:81:783,81,0 chr1 222712777 . A G 5980.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.604;ClippingRankSum=0.000;DP=480;ExcessHet=3.0103;FS=0.529;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.49;ReadPosRankSum=-0.228;SOR=0.774 GT:AD:DP:GQ:PL 0/1:240,239:479:99:6009,0,5892 chr1 222730956 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222730964 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222746553 . T G 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.967;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=2.721;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.59;ReadPosRankSum=0.246;SOR=1.692 GT:AD:DP:GQ:PL 0/1:21,9:30:99:286,0,653 chr1 222749659 . A G 1036.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.868;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.832;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=0.087;SOR=0.543 GT:AD:DP:GQ:PL 0/1:53,36:89:99:1065,0,1615 chr1 222750009 . A G 925.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.240;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=2.041;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.61;ReadPosRankSum=-0.453;SOR=0.986 GT:AD:DP:GQ:PL 0/1:30,38:68:99:954,0,730 chr1 222793760 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 222942767 . C T 441.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.672;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=4.648;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.60;ReadPosRankSum=0.578;SOR=0.150 GT:AD:DP:GQ:PL 0/1:29,17:46:99:470,0,1000 chr1 222943130 . G A 3448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.225;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=1.958;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.29;ReadPosRankSum=0.719;SOR=0.859 GT:AD:DP:GQ:PL 0/1:73,89:162:99:3477,0,3863 chr1 222943132 . G T 3448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.029;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=1.962;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.29;ReadPosRankSum=0.879;SOR=0.869 GT:AD:DP:GQ:PL 0/1:74,88:162:99:3477,0,3863 chr1 222943581 . A T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 222945806 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222945808 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222945815 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222945839 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222945844 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222945847 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222945850 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222945853 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222945854 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222945860 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222945869 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222945873 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222945874 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222945881 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222955179 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222955181 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 222979526 . G A 1603.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=38.01;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1632,120,0 chr1 222983040 . C T 638.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.62;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,24:24:71:667,71,0 chr1 222991205 . A T 233.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.38;ReadPosRankSum=-1.001;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,7:10:95:262,0,95 chr1 222994871 . T C 564.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.265;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=1.001;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.91;ReadPosRankSum=1.869;SOR=0.841 GT:AD:DP:GQ:PL 0/1:32,25:57:99:593,0,890 chr1 223002933 . G A 1197.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.062;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=2.835;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.46;ReadPosRankSum=0.729;SOR=0.407 GT:AD:DP:GQ:PL 0/1:41,48:89:99:1226,0,1087 chr1 223004232 . A G 3063.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.068;ClippingRankSum=0.000;DP=192;ExcessHet=3.0103;FS=1.799;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.96;ReadPosRankSum=-0.014;SOR=0.859 GT:AD:DP:GQ:PL 0/1:83,109:192:99:3092,0,2237 chr1 223005136 . G A 3379.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.887;ClippingRankSum=0.000;DP=313;ExcessHet=3.0103;FS=0.873;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.80;ReadPosRankSum=0.504;SOR=0.751 GT:AD:DP:GQ:PL 0/1:179,134:313:99:3408,0,5043 chr1 223005219 . A C 4496.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.843;ClippingRankSum=0.000;DP=345;ExcessHet=3.0103;FS=1.761;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.03;ReadPosRankSum=0.229;SOR=0.671 GT:AD:DP:GQ:PL 0/1:184,161:345:99:4525,0,5029 chr1 223010092 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 223010148 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 223035382 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 223039631 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 223049610 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 223074925 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 223111186 . A G 3987.77 PASS AC=2;AF=1.00;AN=2;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.42;SOR=1.004 GT:AD:DP:GQ:PL 1/1:0,123:123:99:4016,369,0 chr1 223111858 . G A 1119.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-5.105;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=3.687;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.66;ReadPosRankSum=0.782;SOR=0.413 GT:AD:DP:GQ:PL 0/1:59,46:105:99:1148,0,2036 chr1 223112491 . G T 2437.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.627;ClippingRankSum=0.000;DP=172;ExcessHet=3.0103;FS=1.898;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.17;ReadPosRankSum=1.340;SOR=0.846 GT:AD:DP:GQ:PL 0/1:80,92:172:99:2466,0,2009 chr1 223113209 . A C 858.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.08;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,20:20:60:887,60,0 chr1 223113219 . T G 691.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.20;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:720,48,0 chr1 223197990 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 223229101 . G A 1560.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.675;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=6.638;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.57;ReadPosRankSum=1.219;SOR=1.481 GT:AD:DP:GQ:PL 0/1:63,52:115:99:1589,0,1859 chr1 223292227 . C T 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr1 223358984 . C T 430.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.063;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=1.773;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.05;ReadPosRankSum=1.418;SOR=1.230 GT:AD:DP:GQ:PL 0/1:18,15:33:99:459,0,516 chr1 223359228 . T C 1290.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.861;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=1.777;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.18;ReadPosRankSum=0.510;SOR=0.509 GT:AD:DP:GQ:PL 0/1:39,52:91:99:1319,0,980 chr1 223359323 . G A 532.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.889;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.16;ReadPosRankSum=-1.140;SOR=0.693 GT:AD:DP:GQ:PL 0/1:7,16:23:99:561,0,223 chr1 223359356 . T C 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=-0.191;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:256,0,173 chr1 223393517 . T C 439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.493;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=5.035;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.99;ReadPosRankSum=-0.613;SOR=1.630 GT:AD:DP:GQ:PL 0/1:28,16:44:99:468,0,731 chr1 223393534 . G A 478.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.097;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=2.602;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.58;ReadPosRankSum=-0.543;SOR=1.112 GT:AD:DP:GQ:PL 0/1:31,19:50:99:507,0,838 chr1 223393925 . C T 2605.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.425;ClippingRankSum=0.000;DP=192;ExcessHet=3.0103;FS=2.545;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.57;ReadPosRankSum=1.169;SOR=0.523 GT:AD:DP:GQ:PL 0/1:94,98:192:99:2634,0,2557 chr1 223394059 . T C 3715.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.176;ClippingRankSum=0.000;DP=278;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.37;ReadPosRankSum=-1.670;SOR=0.721 GT:AD:DP:GQ:PL 0/1:138,140:278:99:3744,0,3702 chr1 223394189 . G A 3455.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.577;ClippingRankSum=0.000;DP=246;ExcessHet=3.0103;FS=5.114;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.05;ReadPosRankSum=0.319;SOR=0.551 GT:AD:DP:GQ:PL 0/1:115,131:246:99:3484,0,3164 chr1 223394466 . C T 1299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.023;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=9.246;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.29;ReadPosRankSum=-2.233;SOR=0.208 GT:AD:DP:GQ:PL 0/1:37,48:85:99:1328,0,1176 chr1 223435107 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 223456481 . T C 32.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.92;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:61:61,0,75 chr1 223460109 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 223476878 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 223478343 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 223494226 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 223495299 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 223519027 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.33;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 223538305 . G A 1169.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.271;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.87;ReadPosRankSum=-0.040;SOR=0.481 GT:AD:DP:GQ:PL 0/1:28,34:62:99:1198,0,981 chr1 223545289 . G A 2040.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.46;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2069,183,0 chr1 223545350 . T C 1192.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.08;SOR=2.368 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1221,105,0 chr1 223549417 . G A 4176.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.41;SOR=1.807 GT:AD:DP:GQ:PL 1/1:0,125:125:99:4205,375,0 chr1 223625597 . G A 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=-0.366;SOR=0.148 GT:AD:DP:GQ:PL 0/1:4,4:8:99:109,0,143 chr1 223625884 . G T 886.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.339;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.19;ReadPosRankSum=-0.246;SOR=0.739 GT:AD:DP:GQ:PL 0/1:52,35:87:99:915,0,1420 chr1 223626841 . T G 182.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.615;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.06;ReadPosRankSum=0.507;SOR=0.569 GT:AD:DP:GQ:PL 0/1:7,6:13:99:211,0,241 chr1 223626969 . A T 676.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.974;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=6.975;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.40;ReadPosRankSum=2.035;SOR=0.226 GT:AD:DP:GQ:PL 0/1:43,29:72:99:705,0,1310 chr1 223627798 . C T 201.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.156;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.76;ReadPosRankSum=0.429;SOR=0.922 GT:AD:DP:GQ:PL 0/1:17,9:26:99:230,0,536 chr1 223627873 . G A 568.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.356;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.73;ReadPosRankSum=-0.562;SOR=0.659 GT:AD:DP:GQ:PL 0/1:30,23:53:99:597,0,919 chr1 223628620 . A G 2137.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.119;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=1.840;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=1.286;SOR=0.553 GT:AD:DP:GQ:PL 0/1:103,80:183:99:2166,0,2796 chr1 223628645 . A G 2408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.116;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=0.527;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.29;ReadPosRankSum=-0.504;SOR=0.765 GT:AD:DP:GQ:PL 0/1:108,88:196:99:2437,0,2984 chr1 223628875 . T C 535.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.657;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=2.125;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.10;ReadPosRankSum=1.079;SOR=1.436 GT:AD:DP:GQ:PL 0/1:21,17:38:99:564,0,660 chr1 223639485 . A G 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.253;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr1 223665738 . A G 725.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.27;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,19:19:57:754,57,0 chr1 223712706 . C G 5368.77 PASS AC=2;AF=1.00;AN=2;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.77;SOR=1.639 GT:AD:DP:GQ:PL 1/1:0,159:159:99:5397,476,0 chr1 223713093 . C T 118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.79;ReadPosRankSum=0.000;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:147,0,65 chr1 223717830 . G A 4592.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.498;ClippingRankSum=0.000;DP=324;ExcessHet=3.0103;FS=2.381;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.18;ReadPosRankSum=-0.513;SOR=0.841 GT:AD:DP:GQ:PL 0/1:152,172:324:99:4621,0,3760 chr1 223736637 . G A 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 223743946 . T C 2234.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.92;SOR=1.963 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2263,192,0 chr1 223744527 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 223745611 . A T 372.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.59;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:401,30,0 chr1 223747018 . G A 11199.77 PASS AC=2;AF=1.00;AN=2;DP=348;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.18;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,348:348:99:11228,1043,0 chr1 223747388 . G C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 223751116 . G A 522.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.91;ReadPosRankSum=0.350;SOR=1.136 GT:AD:DP:GQ:PL 0/1:10,15:25:99:551,0,342 chr1 223761456 . G A 308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.58;ReadPosRankSum=0.245;SOR=2.448 GT:AD:DP:GQ:PL 0/1:3,12:15:50:337,0,50 chr1 223764139 . T C 4246.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.891;ClippingRankSum=0.000;DP=332;ExcessHet=3.0103;FS=3.002;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.79;ReadPosRankSum=-1.369;SOR=0.543 GT:AD:DP:GQ:PL 0/1:168,164:332:99:4275,0,4551 chr1 223764283 . C A 3691.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.072;ClippingRankSum=0.000;DP=248;ExcessHet=3.0103;FS=4.480;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.89;ReadPosRankSum=-1.364;SOR=0.981 GT:AD:DP:GQ:PL 0/1:122,126:248:99:3720,0,3169 chr1 223764450 . T A 349.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.21;ReadPosRankSum=-1.854;SOR=0.616 GT:AD:DP:GQ:PL 0/1:12,11:23:99:378,0,409 chr1 223769633 . T A 317.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.791;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.89;ReadPosRankSum=-0.162;SOR=1.765 GT:AD:DP:GQ:PL 0/1:10,10:20:99:346,0,323 chr1 223772094 . G A 1294.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.955;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=2.506;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.99;ReadPosRankSum=-0.955;SOR=0.616 GT:AD:DP:GQ:PL 0/1:60,48:108:99:1323,0,1841 chr1 223772257 . G A 922.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.586;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.959;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.47;ReadPosRankSum=1.260;SOR=0.874 GT:AD:DP:GQ:PL 0/1:38,36:74:99:951,0,976 chr1 223789425 . C T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.960;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,105 chr1 223792505 . G C 1839.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.381;ClippingRankSum=0.000;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.606;SOR=0.670 GT:AD:DP:GQ:PL 0/1:96,74:170:99:1868,0,2546 chr1 223800999 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 223802264 . C T 4259.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.073;ClippingRankSum=0.000;DP=378;ExcessHet=3.0103;FS=1.692;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.27;ReadPosRankSum=-0.528;SOR=0.606 GT:AD:DP:GQ:PL 0/1:213,165:378:99:4288,0,5900 chr1 223821211 . G A 546.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.108;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.43;ReadPosRankSum=0.667;SOR=0.769 GT:AD:DP:GQ:PL 0/1:23,21:44:99:575,0,646 chr1 223856408 . T G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 223951987 . G A 546.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.500;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=1.042;MLEAC=1;MLEAF=0.500;MQ=56.36;MQRankSum=-2.273;QD=8.96;ReadPosRankSum=-0.220;SOR=0.994 GT:AD:DP:GQ:PL 0/1:39,22:61:99:575,0,1062 chr1 223952639 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.40;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 223971674 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.92;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 224041935 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 224050548 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 224100100 . T G 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 224114047 . C T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.000;SOR=2.833 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,112 chr1 224114528 . C G 443.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.281;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.07;ReadPosRankSum=0.026;SOR=0.255 GT:AD:DP:GQ:PL 0/1:12,14:26:99:472,0,419 chr1 224121920 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 224121929 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 224130299 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 224133935 . A G 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.13;ReadPosRankSum=0.253;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:137,0,65 chr1 224134282 . C T 2701.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.20;SOR=2.332 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2730,237,0 chr1 224157310 . G A 962.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.66;SOR=3.690 GT:AD:DP:GQ:PL 1/1:0,27:27:81:991,81,0 chr1 224164556 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 224227914 . C T 1156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.493;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=1.009;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.31;ReadPosRankSum=0.211;SOR=0.468 GT:AD:DP:GQ:PL 0/1:52,42:94:99:1185,0,1574 chr1 224230508 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 224236740 . A G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.59;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 224236767 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 224249527 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 224250518 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 224256926 . C T 2358.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.88;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2387,222,0 chr1 224257199 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 224281219 . C T 565.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.030;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=4.073;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.48;ReadPosRankSum=-0.149;SOR=1.333 GT:AD:DP:GQ:PL 0/1:31,23:54:99:594,0,860 chr1 224281284 . C T 246.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.638;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=5.229;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.71;ReadPosRankSum=-2.241;SOR=3.383 GT:AD:DP:GQ:PL 0/1:11,7:18:99:234,0,233 chr1 224286147 . A C 947.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.592;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=3.732;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.54;ReadPosRankSum=1.209;SOR=0.348 GT:AD:DP:GQ:PL 0/1:25,36:61:99:976,0,687 chr1 224294514 . T C 729.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.346;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=10.936;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.20;ReadPosRankSum=0.122;SOR=3.567 GT:AD:DP:GQ:PL 0/1:17,21:38:99:758,0,528 chr1 224296708 . C A 580.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.540;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.15;ReadPosRankSum=0.079;SOR=0.307 GT:AD:DP:GQ:PL 0/1:14,18:32:99:609,0,484 chr1 224301508 . T C 113.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.335;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.34;ReadPosRankSum=-1.169;SOR=0.120 GT:AD:DP:GQ:PL 0/1:6,5:11:99:142,0,218 chr1 224303562 . T A 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.59;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr1 224304679 . C T 1212.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.65;SOR=2.649 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1241,105,0 chr1 224305044 . C T 945.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.626;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=1.776;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.00;ReadPosRankSum=1.647;SOR=0.666 GT:AD:DP:GQ:PL 0/1:48,38:86:99:974,0,1153 chr1 224305300 . T C 96.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:124,9,0 chr1 224308150 . C T 2886.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.425;ClippingRankSum=0.000;DP=201;ExcessHet=3.0103;FS=1.100;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.51;ReadPosRankSum=-0.452;SOR=0.607 GT:AD:DP:GQ:PL 0/1:88,111:199:99:2915,0,2151 chr1 224311510 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 224313179 . A G 102.85 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.14;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:17:131,17,0 chr1 224318017 . T G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 224324689 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 224326573 . G A 674.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.23;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,18:18:54:703,54,0 chr1 224327165 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 224327241 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 224330140 . C T 2215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.985;ClippingRankSum=0.000;DP=177;ExcessHet=3.0103;FS=0.556;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.52;ReadPosRankSum=0.344;SOR=0.784 GT:AD:DP:GQ:PL 0/1:94,83:177:99:2244,0,2400 chr1 224330205 . A T 1410.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.193;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=8.347;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.11;ReadPosRankSum=1.275;SOR=0.296 GT:AD:DP:GQ:PL 0/1:65,62:127:99:1439,0,1775 chr1 224330372 . T C 359.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.034;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.869;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.98;ReadPosRankSum=0.942;SOR=1.942 GT:AD:DP:GQ:PL 0/1:3,12:15:80:388,0,80 chr1 224330441 . T C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 224350628 . G A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,78 chr1 224350629 . G A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,78 chr1 224356827 . A G 715.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.45;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,19:19:57:744,57,0 chr1 224375769 . G A 1050.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.428;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.40;ReadPosRankSum=0.321;SOR=0.728 GT:AD:DP:GQ:PL 0/1:61,40:101:99:1079,0,1658 chr1 224379302 . G A 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.34;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 224389695 . A G 231.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.908;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.07;ReadPosRankSum=-1.004;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:260,0,102 chr1 224413208 . C A 1165.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.46;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:98:1194,98,0 chr1 224413218 . C A 1117.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.58;SOR=1.044 GT:AD:DP:GQ:PL 1/1:0,31:31:92:1146,92,0 chr1 224413478 . T C 319.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.064;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=1.523;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.32;ReadPosRankSum=0.860;SOR=0.404 GT:AD:DP:GQ:PL 0/1:16,15:31:99:348,0,437 chr1 224431313 . A T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 224433666 . G C 2073.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.51;SOR=2.998 GT:AD:DP:GQ:PL 1/1:0,57:57:99:2102,171,0 chr1 224478605 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 224483958 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 224499045 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.80;ReadPosRankSum=0.967;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:31:81,0,31 chr1 224503132 . A T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 224574465 . C T 446.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.631;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=1.289;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.76;ReadPosRankSum=0.392;SOR=0.377 GT:AD:DP:GQ:PL 0/1:19,19:38:99:475,0,509 chr1 224613227 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 224617410 . C T 354.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.618;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=2.291;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.78;ReadPosRankSum=0.911;SOR=1.911 GT:AD:DP:GQ:PL 0/1:12,12:24:99:383,0,361 chr1 224625698 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 224680894 . A C 1855.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.093;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=1.395;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.65;ReadPosRankSum=0.213;SOR=0.889 GT:AD:DP:GQ:PL 0/1:68,68:136:99:1884,0,1867 chr1 224684520 . G A 236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.31;ReadPosRankSum=-0.140;SOR=2.093 GT:AD:DP:GQ:PL 0/1:2,7:9:56:265,0,56 chr1 224684741 . A G 3800.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.527;ClippingRankSum=0.000;DP=310;ExcessHet=3.0103;FS=2.480;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.26;ReadPosRankSum=0.162;SOR=0.569 GT:AD:DP:GQ:PL 0/1:160,150:310:99:3829,0,4329 chr1 224684771 . A G 4354.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.216;ClippingRankSum=0.000;DP=362;ExcessHet=3.0103;FS=2.241;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=-0.909;SOR=0.585 GT:AD:DP:GQ:PL 0/1:192,169:361:99:4383,0,5175 chr1 224896517 . C T 995.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.681;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=3.087;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.47;ReadPosRankSum=-0.421;SOR=1.721 GT:AD:DP:GQ:PL 0/1:28,29:57:99:1024,0,964 chr1 224923526 . T A 860.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.315;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=3.881;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.59;ReadPosRankSum=0.905;SOR=0.223 GT:AD:DP:GQ:PL 0/1:31,28:59:99:889,0,1022 chr1 224929859 . T C 608.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.332;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=4.349;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.55;ReadPosRankSum=1.116;SOR=1.828 GT:AD:DP:GQ:PL 0/1:9,18:27:99:637,0,249 chr1 224967412 . A T 401.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.966;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=4.460;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.81;ReadPosRankSum=-0.269;SOR=0.230 GT:AD:DP:GQ:PL 0/1:36,23:59:99:439,0,1933 chr1 224968953 . C T 901.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.373;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.87;ReadPosRankSum=-0.736;SOR=0.651 GT:AD:DP:GQ:PL 0/1:28,37:65:99:930,0,634 chr1 224969010 . C T 486.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.689;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.70;ReadPosRankSum=0.812;SOR=0.627 GT:AD:DP:GQ:PL 0/1:14,17:31:99:515,0,377 chr1 224969142 . A G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 224977695 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 224983459 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 225023982 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 225042906 . C T 1085.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.029;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.55;ReadPosRankSum=-0.618;SOR=0.622 GT:AD:DP:GQ:PL 0/1:48,46:94:99:1114,0,1256 chr1 225043193 . G A 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.253;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 225050148 . A C 364.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.58;ReadPosRankSum=1.372;SOR=0.693 GT:AD:DP:GQ:PL 0/1:11,11:22:99:393,0,393 chr1 225050744 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 225062208 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 225062231 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 225079264 . C G 780.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.895;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.83;ReadPosRankSum=-0.140;SOR=0.631 GT:AD:DP:GQ:PL 0/1:37,29:66:99:809,0,938 chr1 225080641 . A G 1411.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.639;ClippingRankSum=0.000;DP=155;ExcessHet=3.0103;FS=2.287;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.17;ReadPosRankSum=-0.844;SOR=0.903 GT:AD:DP:GQ:PL 0/1:112,42:154:99:1440,0,5943 chr1 225080644 . G A 1414.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.749;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=2.367;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.50;ReadPosRankSum=-1.189;SOR=0.965 GT:AD:DP:GQ:PL 0/1:108,41:149:99:1443,0,5925 chr1 225082707 . A T 1873.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.498;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=0.646;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.20;ReadPosRankSum=0.894;SOR=0.773 GT:AD:DP:GQ:PL 0/1:72,70:142:99:1902,0,1908 chr1 225085546 . G T 445.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.983;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=3.410;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.38;ReadPosRankSum=-0.683;SOR=0.223 GT:AD:DP:GQ:PL 0/1:16,20:36:99:474,0,458 chr1 225085931 . T A 349.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.905;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=0.833;SOR=0.404 GT:AD:DP:GQ:PL 0/1:16,11:27:99:378,0,575 chr1 225100832 . A C 317.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.478;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=7.681;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=-0.474;SOR=1.711 GT:AD:DP:GQ:PL 0/1:20,14:34:99:346,0,512 chr1 225108149 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 225117870 . C G 942.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.396;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.46;ReadPosRankSum=-1.116;SOR=0.576 GT:AD:DP:GQ:PL 0/1:26,35:61:99:971,0,696 chr1 225140730 . G T 190.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.935;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=3.274;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.22;ReadPosRankSum=-0.323;SOR=0.084 GT:AD:DP:GQ:PL 0/1:8,9:17:99:219,0,281 chr1 225145577 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 225147098 . T A 310.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.163;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.36;ReadPosRankSum=-0.320;SOR=0.317 GT:AD:DP:GQ:PL 0/1:8,11:19:99:339,0,263 chr1 225153985 . A G 514.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.379;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.38;ReadPosRankSum=-0.440;SOR=0.859 GT:AD:DP:GQ:PL 0/1:8,15:23:99:543,0,231 chr1 225168200 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 225252286 . T C 1047.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.746;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=1.682;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.15;ReadPosRankSum=-1.741;SOR=0.521 GT:AD:DP:GQ:PL 0/1:53,41:94:99:1076,0,1421 chr1 225257950 . G T 390.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.044;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.547;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=0.729;SOR=1.194 GT:AD:DP:GQ:PL 0/1:20,15:35:99:419,0,531 chr1 225272924 . T A 327.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.197;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=1.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.30;ReadPosRankSum=-0.341;SOR=1.179 GT:AD:DP:GQ:PL 0/1:13,16:29:99:365,0,353 chr1 225289789 . C T 280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.955;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=2.933;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.55;ReadPosRankSum=-0.749;SOR=0.132 GT:AD:DP:GQ:PL 0/1:5,11:16:99:309,0,161 chr1 225289844 . A C 646.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.028;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=2.877;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.76;ReadPosRankSum=-0.529;SOR=0.313 GT:AD:DP:GQ:PL 0/1:18,29:47:99:675,0,475 chr1 225290091 . T G 594.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.190;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=4.496;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.65;ReadPosRankSum=1.138;SOR=0.165 GT:AD:DP:GQ:PL 0/1:17,21:38:99:623,0,522 chr1 225304843 . A G 93.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.908;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.52;ReadPosRankSum=0.533;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:99:122,0,259 chr1 225305143 . C T 403.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.580;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.46;ReadPosRankSum=-0.719;SOR=0.693 GT:AD:DP:GQ:PL 0/1:15,15:30:99:432,0,453 chr1 225307739 . G T 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-0.180;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 225318592 . A G 2077.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.740;ClippingRankSum=0.000;DP=167;ExcessHet=3.0103;FS=4.510;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.007;SOR=1.033 GT:AD:DP:GQ:PL 0/1:81,86:167:99:2106,0,2023 chr1 225322862 . C T 435.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.587;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=1.736;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.06;ReadPosRankSum=0.749;SOR=1.362 GT:AD:DP:GQ:PL 0/1:14,17:31:99:464,0,356 chr1 225331779 . A T 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=1.242;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:131,0,143 chr1 225340784 . G A 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.605;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=-0.114;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,206 chr1 225346029 . T A 924.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.589;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.87;ReadPosRankSum=-0.921;SOR=0.836 GT:AD:DP:GQ:PL 0/1:18,31:49:99:953,0,468 chr1 225351963 . T A 176.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.105;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.60;ReadPosRankSum=-1.065;SOR=1.609 GT:AD:DP:GQ:PL 0/1:7,6:13:99:205,0,219 chr1 225353670 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 225353947 . A G 474.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.283;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=2.958;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.56;ReadPosRankSum=-1.428;SOR=1.292 GT:AD:DP:GQ:PL 0/1:16,19:35:99:503,0,427 chr1 225354197 . C T 1575.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.406;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=3.210;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.22;ReadPosRankSum=-0.600;SOR=0.435 GT:AD:DP:GQ:PL 0/1:70,59:129:99:1604,0,1940 chr1 225357878 . A C 1372.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.062;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=0.962;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.48;ReadPosRankSum=1.692;SOR=0.524 GT:AD:DP:GQ:PL 0/1:62,48:110:99:1401,0,1892 chr1 225358470 . C G 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=0.372;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:256,0,173 chr1 225364922 . G A 243.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.171;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=3.151;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.86;ReadPosRankSum=-1.617;SOR=1.302 GT:AD:DP:GQ:PL 0/1:19,12:31:99:272,0,496 chr1 225364948 . C T 196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.540;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=4.409;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.87;ReadPosRankSum=0.039;SOR=1.863 GT:AD:DP:GQ:PL 0/1:17,8:25:99:225,0,533 chr1 225367810 . C T 2100.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.650;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=0.568;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.66;ReadPosRankSum=0.109;SOR=0.746 GT:AD:DP:GQ:PL 0/1:90,76:166:99:2129,0,2403 chr1 225367900 . T G 1646.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.974;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=0.686;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.87;ReadPosRankSum=0.877;SOR=0.833 GT:AD:DP:GQ:PL 0/1:64,64:128:99:1675,0,1766 chr1 225374683 . C T 4989.77 PASS AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.04;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,151:151:99:5018,453,0 chr1 225377313 . T C 2137.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.98;SOR=1.131 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2166,207,0 chr1 225377371 . C T 1905.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.78;SOR=0.966 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1934,192,0 chr1 225381539 . T G 2082.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.14;SOR=1.727 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2111,183,0 chr1 225388356 . T C 2735.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.40;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2764,269,0 chr1 225388609 . A G 901.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.60;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,24:24:72:930,72,0 chr1 225389361 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 225389946 . C T 1469.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.34;SOR=3.967 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1498,117,0 chr1 225392959 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 225399808 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 225399927 . G A 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr1 225399976 . G A 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr1 225404191 . G T 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.44;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 225408462 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 225410144 . A G 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.53;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr1 225410607 . A C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.21;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 225413945 . C T 3909.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.53;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3938,371,0 chr1 225415401 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 225419442 . C T 1492.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.30;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1521,120,0 chr1 225422182 . A G 5398.77 PASS AC=2;AF=1.00;AN=2;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,170:170:99:5427,510,0 chr1 225422538 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 225423959 . C T 2834.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.48;SOR=1.440 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2863,279,0 chr1 225424143 . C T 1479.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.23;SOR=3.312 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1508,123,0 chr1 225427864 . G C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.59;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 225427978 . C G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 225431469 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 225464205 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 225470096 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 225471766 . C T 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 225497090 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 225497099 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 225497100 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 225497102 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 225509314 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 225519696 . C T 55.89 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.150;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=13.97;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 1/1:1,3:4:2:82,2,0 chr1 225549634 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 225687590 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 225732520 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 225732527 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 225774838 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 225777825 . C A 251.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=-0.152;SOR=1.445 GT:AD:DP:GQ:PL 0/1:10,8:18:99:280,0,363 chr1 225777848 . G A 391.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.09;MQRankSum=-0.369;QD=14.51;ReadPosRankSum=-0.212;SOR=0.495 GT:AD:DP:GQ:PL 0/1:15,12:27:99:420,0,545 chr1 225778101 . C A 1278.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.027;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.12;ReadPosRankSum=0.968;SOR=0.756 GT:AD:DP:GQ:PL 0/1:62,53:115:99:1307,0,1683 chr1 225786829 . A G 1060.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.31;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1089,105,0 chr1 225803256 . G C 5183.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.68;SOR=1.526 GT:AD:DP:GQ:PL 1/1:0,111:111:99:5212,352,0 chr1 225803257 . T C 5183.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=1.530 GT:AD:DP:GQ:PL 1/1:0,117:117:99:5212,352,0 chr1 225803391 . A G 5427.77 PASS AC=2;AF=1.00;AN=2;DP=166;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.70;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,166:166:99:5456,498,0 chr1 225803463 . G A 1625.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.714;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=1.920;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.30;ReadPosRankSum=0.370;SOR=0.447 GT:AD:DP:GQ:PL 0/1:34,60:94:99:1654,0,921 chr1 225803474 . T G 2616.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.55;SOR=1.966 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2645,234,0 chr1 225812277 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 225831932 . T C 2829.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.16;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2858,264,0 chr1 225832073 . G C 1212.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.69;SOR=2.712 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1241,108,0 chr1 225838540 . C G 848.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.38;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:877,63,0 chr1 225843764 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 225843765 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 225845382 . A C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.660;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.80;ReadPosRankSum=-0.238;SOR=0.180 GT:AD:DP:GQ:PL 0/1:8,3:11:81:81,0,253 chr1 225848608 . A G 1244.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.929;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.861;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.76;ReadPosRankSum=1.890;SOR=0.818 GT:AD:DP:GQ:PL 0/1:38,41:79:99:1273,0,1027 chr1 225849143 . T C 419.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.69;ReadPosRankSum=-1.239;SOR=1.739 GT:AD:DP:GQ:PL 0/1:5,12:17:99:448,0,158 chr1 225852703 . C T 1941.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.100;ClippingRankSum=0.000;DP=170;ExcessHet=3.0103;FS=2.789;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.42;ReadPosRankSum=-0.599;SOR=0.920 GT:AD:DP:GQ:PL 0/1:93,77:170:99:1970,0,2527 chr1 225852986 . A C 77.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.241;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.64;ReadPosRankSum=-0.060;SOR=0.148 GT:AD:DP:GQ:PL 0/1:5,4:9:99:106,0,148 chr1 225857066 . G A 1409.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.373;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=0.750;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.59;ReadPosRankSum=0.078;SOR=0.596 GT:AD:DP:GQ:PL 0/1:58,54:112:99:1438,0,1606 chr1 225863115 . A G 606.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.00;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:635,45,0 chr1 225863132 . T C 456.77 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.03;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:33:485,33,0 chr1 225866105 . G A 1035.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.219;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=2.518;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.17;ReadPosRankSum=2.005;SOR=0.486 GT:AD:DP:GQ:PL 0/1:66,47:113:99:1064,0,1770 chr1 225866633 . G A 3491.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.670;ClippingRankSum=0.000;DP=301;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.64;ReadPosRankSum=-1.086;SOR=0.699 GT:AD:DP:GQ:PL 0/1:157,143:300:99:3520,0,4093 chr1 225866956 . G A 1271.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.83;SOR=2.546 GT:AD:DP:GQ:PL 1/1:0,29:29:90:1300,90,0 chr1 225866981 . T A 1712.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.73;SOR=3.003 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1741,123,0 chr1 225867014 . G A 859.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.926;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=6.520;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.11;ReadPosRankSum=-0.545;SOR=1.691 GT:AD:DP:GQ:PL 0/1:43,28:71:99:888,0,1221 chr1 225867895 . G A 2827.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.669;ClippingRankSum=0.000;DP=230;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.29;ReadPosRankSum=-0.133;SOR=0.721 GT:AD:DP:GQ:PL 0/1:121,109:230:99:2856,0,3351 chr1 225870834 . C G 992.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.52;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1021,84,0 chr1 225877146 . A G 366.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.001;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=3.124;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.53;ReadPosRankSum=-1.136;SOR=1.513 GT:AD:DP:GQ:PL 0/1:28,15:43:99:395,0,700 chr1 225877709 . G A 104.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.52;ReadPosRankSum=-1.973;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:99:133,0,259 chr1 225886863 . T G 6243.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.562;ClippingRankSum=0.000;DP=455;ExcessHet=3.0103;FS=2.499;MLEAC=1;MLEAF=0.500;MQ=58.53;MQRankSum=-7.974;QD=13.75;ReadPosRankSum=-0.400;SOR=0.909 GT:AD:DP:GQ:PL 0/1:232,222:454:99:6272,0,6496 chr1 225889219 . G T 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=3.862;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.64;ReadPosRankSum=1.225;SOR=1.915 GT:AD:DP:GQ:PL 0/1:13,13:26:99:331,0,334 chr1 225890637 . A G 128.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.46;ReadPosRankSum=1.383;SOR=0.941 GT:AD:DP:GQ:PL 0/1:1,5:6:24:157,0,24 chr1 225896277 . G A 96.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:125,15,0 chr1 225920500 . C T 1487.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.467;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.65;ReadPosRankSum=0.465;SOR=0.648 GT:AD:DP:GQ:PL 0/1:51,58:109:99:1516,0,1321 chr1 225939743 . G C 2177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.117;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=5.680;MLEAC=1;MLEAF=0.500;MQ=59.12;MQRankSum=-1.660;QD=15.90;ReadPosRankSum=1.106;SOR=1.216 GT:AD:DP:GQ:PL 0/1:66,71:137:99:2206,0,2125 chr1 225945490 . A G 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 225992208 . A G 806.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.52;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,22:22:66:835,66,0 chr1 225995099 . A G 223.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.65;ReadPosRankSum=-0.754;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:252,0,168 chr1 226026120 . T G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 226064531 . C T 945.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.61;SOR=1.942 GT:AD:DP:GQ:PL 1/1:0,29:29:86:974,86,0 chr1 226065426 . T G 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.70;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr1 226065615 . G T 1375.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1404,129,0 chr1 226070569 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 226070577 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 226084065 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 226090930 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 226115821 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 226125970 . A G 45.52 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr1 226127247 . G A 601.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.639;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=1.038;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.26;ReadPosRankSum=-0.146;SOR=0.853 GT:AD:DP:GQ:PL 0/1:39,26:65:99:630,0,1156 chr1 226127531 . G T 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=-0.566;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr1 226146877 . G A 1789.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.96;SOR=2.066 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1818,167,0 chr1 226164797 . T G 1030.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.383;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.777;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.74;ReadPosRankSum=0.969;SOR=0.553 GT:AD:DP:GQ:PL 0/1:76,42:118:99:1059,0,2168 chr1 226165111 . T C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,113 chr1 226165129 . A C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:78:78,0,113 chr1 226165648 . G T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 226182051 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 226223616 . C T 444.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.610;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-1.442;SOR=0.776 GT:AD:DP:GQ:PL 0/1:15,16:31:99:473,0,465 chr1 226232835 . C G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 226236776 . C A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 226250748 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 226268233 . C T 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.748;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=1.169;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:218,0,164 chr1 226286431 . G A 363.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.409;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.13;ReadPosRankSum=2.273;SOR=0.540 GT:AD:DP:GQ:PL 0/1:16,14:30:99:392,0,442 chr1 226290680 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 226301125 . A G 681.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.553;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.96;ReadPosRankSum=0.163;SOR=0.818 GT:AD:DP:GQ:PL 0/1:31,26:57:99:710,0,919 chr1 226348944 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 226351652 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 226362736 . G A 74.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=8.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.68;ReadPosRankSum=0.842;SOR=0.829 GT:AD:DP:GQ:PL 0/1:4,3:7:99:103,0,301 chr1 226362741 . T C 74.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.368;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=8.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.68;ReadPosRankSum=0.328;SOR=0.829 GT:AD:DP:GQ:PL 0/1:4,3:7:99:103,0,301 chr1 226363040 . C T 1832.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.743;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=1.370;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.78;ReadPosRankSum=-0.827;SOR=0.843 GT:AD:DP:GQ:PL 0/1:65,68:133:99:1861,0,1929 chr1 226363759 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 226363805 . T C 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=0.732;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr1 226363828 . C G 382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.92;ReadPosRankSum=-0.425;SOR=1.609 GT:AD:DP:GQ:PL 0/1:5,11:16:99:411,0,161 chr1 226365784 . A C 308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.192;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.65;ReadPosRankSum=0.713;SOR=0.818 GT:AD:DP:GQ:PL 0/1:23,9:32:99:337,0,1266 chr1 226365785 . C A 308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.328;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.65;ReadPosRankSum=0.776;SOR=0.818 GT:AD:DP:GQ:PL 0/1:23,9:32:99:337,0,1266 chr1 226365789 . C A 334.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.514;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.46;ReadPosRankSum=0.944;SOR=0.818 GT:AD:DP:GQ:PL 0/1:23,9:32:99:363,0,1276 chr1 226366233 . A C 247.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.350;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.26;ReadPosRankSum=-1.064;SOR=0.392 GT:AD:DP:GQ:PL 0/1:13,9:22:99:276,0,439 chr1 226367601 . A G 3010.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.804;ClippingRankSum=0.000;DP=256;ExcessHet=3.0103;FS=2.095;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.81;ReadPosRankSum=0.146;SOR=0.570 GT:AD:DP:GQ:PL 0/1:135,120:255:99:3039,0,3545 chr1 226368393 . T C 4550.77 PASS AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.96;SOR=1.242 GT:AD:DP:GQ:PL 1/1:0,147:147:99:4579,441,0 chr1 226379025 . A C 1068.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.981;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=1.887;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.28;ReadPosRankSum=0.123;SOR=0.465 GT:AD:DP:GQ:PL 0/1:61,43:104:99:1097,0,1792 chr1 226379307 . C G 4479.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.386;ClippingRankSum=0.000;DP=318;ExcessHet=3.0103;FS=5.093;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=0.086;SOR=0.482 GT:AD:DP:GQ:PL 0/1:155,163:318:99:4508,0,4186 chr1 226379862 . C G 299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.222;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=2.003;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.65;ReadPosRankSum=-0.455;SOR=1.609 GT:AD:DP:GQ:PL 0/1:8,10:18:99:328,0,280 chr1 226383139 . T C 1411.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.630;ClippingRankSum=0.000;DP=130;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=-0.059;SOR=0.726 GT:AD:DP:GQ:PL 0/1:74,56:130:99:1440,0,1877 chr1 226385663 . A G 12872.77 PASS AC=2;AF=1.00;AN=2;DP=408;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.63;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,407:407:99:12901,1221,0 chr1 226385701 . T C 4522.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.188;ClippingRankSum=0.000;DP=369;ExcessHet=3.0103;FS=4.703;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.26;ReadPosRankSum=-0.650;SOR=0.498 GT:AD:DP:GQ:PL 0/1:188,181:369:99:4551,0,5164 chr1 226388569 . A G 777.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.100;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=4.660;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.68;ReadPosRankSum=-0.319;SOR=0.361 GT:AD:DP:GQ:PL 0/1:15,29:44:99:806,0,358 chr1 226388595 . G A 378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.753;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=4.254;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.15;ReadPosRankSum=1.121;SOR=1.371 GT:AD:DP:GQ:PL 0/1:37,16:53:99:407,0,1076 chr1 226390346 . G T 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=1.408;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:173,0,256 chr1 226390398 . T C 1581.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.61;SOR=4.565 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1610,123,0 chr1 226392320 . G T 1262.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.934;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.19;ReadPosRankSum=-1.021;SOR=0.733 GT:AD:DP:GQ:PL 0/1:44,45:89:99:1291,0,1332 chr1 226392392 . C T 1378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.715;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=1.624;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.79;ReadPosRankSum=-0.580;SOR=0.522 GT:AD:DP:GQ:PL 0/1:47,53:100:99:1407,0,1089 chr1 226392486 . T C 1254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.744;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.983;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.19;ReadPosRankSum=0.980;SOR=0.515 GT:AD:DP:GQ:PL 0/1:27,46:73:99:1283,0,678 chr1 226392686 . T G 71.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.25;ReadPosRankSum=-2.189;SOR=0.446 GT:AD:DP:GQ:PL 0/1:4,3:7:99:100,0,146 chr1 226395306 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 226402008 . C T 3071.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.39;SOR=2.154 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3100,275,0 chr1 226402132 . T C 2579.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.131;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.54;ReadPosRankSum=-1.100;SOR=0.683 GT:AD:DP:GQ:PL 0/1:74,92:166:99:2608,0,2015 chr1 226402257 . G A 3503.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.112;ClippingRankSum=0.000;DP=229;ExcessHet=3.0103;FS=1.037;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.30;ReadPosRankSum=0.334;SOR=0.792 GT:AD:DP:GQ:PL 0/1:104,125:229:99:3532,0,2806 chr1 226407676 . C G 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.521;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.75;ReadPosRankSum=0.288;SOR=1.270 GT:AD:DP:GQ:PL 0/1:5,8:13:99:298,0,186 chr1 226407688 . C G 107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.521;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.29;ReadPosRankSum=0.002;SOR=0.330 GT:AD:DP:GQ:PL 0/1:8,5:13:99:136,0,321 chr1 226407946 . C G 5049.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.433;ClippingRankSum=0.000;DP=393;ExcessHet=3.0103;FS=5.044;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=-0.145;SOR=0.813 GT:AD:DP:GQ:PL 0/1:202,191:393:99:5078,0,5498 chr1 226427216 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 226438873 . C T 392.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.030;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=1.824;MLEAC=1;MLEAF=0.500;MQ=59.22;MQRankSum=0.000;QD=17.08;ReadPosRankSum=1.461;SOR=1.473 GT:AD:DP:GQ:PL 0/1:8,15:23:99:421,0,163 chr1 226438983 . G A 310.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.403;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.515;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.72;ReadPosRankSum=1.176;SOR=1.802 GT:AD:DP:GQ:PL 0/1:5,10:15:99:339,0,118 chr1 226478432 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 226478546 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 226479317 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 226484316 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 226488232 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 226507038 . T C 59.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:87,9,0 chr1 226507148 . A G 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 226538113 . G A 2378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.096;ClippingRankSum=0.000;DP=183;ExcessHet=3.0103;FS=3.407;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.07;ReadPosRankSum=-0.226;SOR=0.494 GT:AD:DP:GQ:PL 0/1:84,98:182:99:2407,0,2124 chr1 226543747 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 226554175 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 226554612 . G A 59.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:87,9,0 chr1 226555462 . A G 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 226559628 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 226584051 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 226618093 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 226647513 . A G 655.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.189;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=2.169;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.90;ReadPosRankSum=0.455;SOR=0.188 GT:AD:DP:GQ:PL 0/1:22,22:44:99:684,0,737 chr1 226648889 . A G 746.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.286;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.007;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.45;ReadPosRankSum=-0.730;SOR=0.874 GT:AD:DP:GQ:PL 0/1:31,29:60:99:775,0,762 chr1 226655059 . G C 90.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.345;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.35;ReadPosRankSum=0.000;SOR=0.330 GT:AD:DP:GQ:PL 0/1:3,5:8:99:119,0,102 chr1 226703792 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 226718026 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 226727624 . A G 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr1 226732207 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 226732209 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 226735563 . G A 1541.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.609;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.33;ReadPosRankSum=0.523;SOR=0.682 GT:AD:DP:GQ:PL 0/1:67,58:125:99:1570,0,1805 chr1 226735804 . G T 6789.77 PASS AC=2;AF=1.00;AN=2;DP=208;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.64;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,208:208:99:6818,625,0 chr1 226736237 . A C 2975.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.379;ClippingRankSum=0.000;DP=247;ExcessHet=3.0103;FS=4.322;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=-1.017;SOR=0.968 GT:AD:DP:GQ:PL 0/1:136,111:247:99:3004,0,3916 chr1 226881566 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 226881976 . T C 5623.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.314;ClippingRankSum=0.000;DP=411;ExcessHet=3.0103;FS=1.751;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.72;ReadPosRankSum=0.214;SOR=0.545 GT:AD:DP:GQ:PL 0/1:194,216:410:99:5652,0,5150 chr1 226882036 . C T 3823.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.130;ClippingRankSum=0.000;DP=280;ExcessHet=3.0103;FS=5.401;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.66;ReadPosRankSum=-0.331;SOR=1.039 GT:AD:DP:GQ:PL 0/1:137,143:280:99:3852,0,3702 chr1 226883663 . G A 1940.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.615;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=5.084;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.84;ReadPosRankSum=1.213;SOR=0.227 GT:AD:DP:GQ:PL 0/1:53,50:103:99:1969,0,3805 chr1 226883676 . T C 2295.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.197;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=5.663;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.51;ReadPosRankSum=0.203;SOR=0.237 GT:AD:DP:GQ:PL 0/1:61,63:124:99:2324,0,4001 chr1 226883824 . C T 4085.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.938;ClippingRankSum=0.000;DP=393;ExcessHet=3.0103;FS=0.369;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.45;ReadPosRankSum=-0.475;SOR=0.656 GT:AD:DP:GQ:PL 0/1:225,166:391:99:4114,0,5722 chr1 226885709 . G C 2550.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.375;ClippingRankSum=0.000;DP=215;ExcessHet=3.0103;FS=4.346;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.92;ReadPosRankSum=0.361;SOR=1.006 GT:AD:DP:GQ:PL 0/1:117,97:214:99:2579,0,3292 chr1 226888283 . G A 376.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.826;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=8.625;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.93;ReadPosRankSum=0.054;SOR=3.611 GT:AD:DP:GQ:PL 0/1:7,11:18:99:405,0,169 chr1 226890891 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 226891020 . T A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 226891254 . T C 1229.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.801;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=5.470;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.81;ReadPosRankSum=0.746;SOR=1.310 GT:AD:DP:GQ:PL 0/1:50,46:96:99:1258,0,1323 chr1 226891521 . C G 1710.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.840;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.80;ReadPosRankSum=0.096;SOR=0.631 GT:AD:DP:GQ:PL 0/1:40,51:91:99:1739,0,1230 chr1 226893921 . A G 935.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.945;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=1.098;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.85;ReadPosRankSum=-1.987;SOR=0.542 GT:AD:DP:GQ:PL 0/1:26,37:63:99:964,0,675 chr1 226894149 . G A 600.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.418;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=1.494;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.40;ReadPosRankSum=-0.678;SOR=1.044 GT:AD:DP:GQ:PL 0/1:17,22:39:99:629,0,525 chr1 226895849 . C T 62.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.992;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.963;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.48;ReadPosRankSum=0.177;SOR=0.148 GT:AD:DP:GQ:PL 0/1:10,4:14:91:91,0,339 chr1 226897454 . G A 260.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.904;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.04;ReadPosRankSum=-1.441;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,10:20:99:289,0,323 chr1 226904955 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 226911576 . C A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 226936263 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 226936287 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 226961502 . G A 879.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.964;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=0.816;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.07;ReadPosRankSum=-0.280;SOR=0.799 GT:AD:DP:GQ:PL 0/1:61,36:97:99:908,0,1639 chr1 226977396 . G A 806.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.557;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=5.483;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.15;ReadPosRankSum=0.000;SOR=1.476 GT:AD:DP:GQ:PL 0/1:28,29:57:99:835,0,681 chr1 226977783 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 226982597 . A G 350.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.122;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=8.953;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.25;ReadPosRankSum=-0.482;SOR=0.047 GT:AD:DP:GQ:PL 0/1:9,14:23:99:379,0,290 chr1 226984037 . G T 1288.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.619;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=4.501;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.42;ReadPosRankSum=-0.011;SOR=1.445 GT:AD:DP:GQ:PL 0/1:39,35:74:99:1317,0,1472 chr1 226984038 . G C 970.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.588;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=4.594;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.12;ReadPosRankSum=0.243;SOR=0.241 GT:AD:DP:GQ:PL 0/1:36,38:74:99:999,0,1379 chr1 226984257 . G C 2249.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.243;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=1.512;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.66;ReadPosRankSum=1.928;SOR=0.883 GT:AD:DP:GQ:PL 0/1:60,75:135:99:2278,0,1725 chr1 226984589 . C T 2802.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.212;ClippingRankSum=0.000;DP=257;ExcessHet=3.0103;FS=1.506;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.91;ReadPosRankSum=0.484;SOR=0.802 GT:AD:DP:GQ:PL 0/1:143,114:257:99:2831,0,3763 chr1 226984817 . C T 1465.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.527;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=2.700;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=1.216;SOR=1.062 GT:AD:DP:GQ:PL 0/1:64,48:112:99:1494,0,1886 chr1 226985202 . G A 1131.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.089;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=5.629;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.40;ReadPosRankSum=0.971;SOR=0.257 GT:AD:DP:GQ:PL 0/1:33,36:69:99:1160,0,1091 chr1 226985234 . C G 1651.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.104;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=0.781;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.44;ReadPosRankSum=-1.178;SOR=0.581 GT:AD:DP:GQ:PL 0/1:51,56:107:99:1680,0,1404 chr1 226986421 . C G 1783.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.014;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=2.253;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.66;ReadPosRankSum=-0.124;SOR=0.514 GT:AD:DP:GQ:PL 0/1:82,71:153:99:1812,0,2284 chr1 226986444 . T C 2205.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.590;ClippingRankSum=0.000;DP=190;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.73;ReadPosRankSum=-0.258;SOR=0.650 GT:AD:DP:GQ:PL 0/1:100,88:188:99:2234,0,2505 chr1 226986509 . T C 3920.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.456;ClippingRankSum=0.000;DP=300;ExcessHet=3.0103;FS=3.178;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.07;ReadPosRankSum=0.489;SOR=0.898 GT:AD:DP:GQ:PL 0/1:155,145:300:99:3949,0,4024 chr1 226988461 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 226994137 . T G 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=1.242;SOR=0.039 GT:AD:DP:GQ:PL 0/1:4,4:8:99:109,0,131 chr1 226994222 . C T 594.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.851;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=11.205;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=-1.507;SOR=0.046 GT:AD:DP:GQ:PL 0/1:26,21:47:99:623,0,911 chr1 226994332 . G A 4828.77 PASS AC=2;AF=1.00;AN=2;DP=164;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.44;SOR=0.995 GT:AD:DP:GQ:PL 1/1:0,164:164:99:4857,488,0 chr1 226994478 . C T 1465.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.456;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=6.610;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.23;ReadPosRankSum=-1.330;SOR=0.298 GT:AD:DP:GQ:PL 0/1:44,59:103:99:1494,0,1152 chr1 226994874 . A G 3302.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.36;SOR=1.657 GT:AD:DP:GQ:PL 1/1:0,99:99:99:3331,297,0 chr1 227004776 . C T 197.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.72;ReadPosRankSum=-1.242;SOR=1.863 GT:AD:DP:GQ:PL 0/1:2,6:8:59:226,0,59 chr1 227004878 . A C 1189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.265;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.69;ReadPosRankSum=0.231;SOR=1.044 GT:AD:DP:GQ:PL 0/1:43,38:81:99:1218,0,1469 chr1 227011074 . C G 507.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.258;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=4.091;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.04;ReadPosRankSum=-1.447;SOR=1.641 GT:AD:DP:GQ:PL 0/1:29,17:46:99:536,0,935 chr1 227011167 . C G 60.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.06;ReadPosRankSum=1.408;SOR=0.148 GT:AD:DP:GQ:PL 0/1:9,3:12:89:89,0,339 chr1 227015941 . G C 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=-1.068;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr1 227023119 . G A 414.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.024;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.96;ReadPosRankSum=-1.584;SOR=0.596 GT:AD:DP:GQ:PL 0/1:15,17:32:99:443,0,428 chr1 227023187 . A T 716.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.744;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=2.375;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.52;ReadPosRankSum=-0.344;SOR=0.368 GT:AD:DP:GQ:PL 0/1:24,29:53:99:745,0,623 chr1 227026267 . G T 719.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.063;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.84;ReadPosRankSum=-0.264;SOR=0.914 GT:AD:DP:GQ:PL 0/1:26,26:52:99:748,0,801 chr1 227033550 . T C 927.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.657;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.19;ReadPosRankSum=-0.493;SOR=0.520 GT:AD:DP:GQ:PL 0/1:20,31:51:99:956,0,602 chr1 227040039 . A C 282.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.317;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.78;ReadPosRankSum=0.802;SOR=0.846 GT:AD:DP:GQ:PL 0/1:14,10:24:99:311,0,478 chr1 227052045 . G T 468.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.354;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.21;ReadPosRankSum=0.378;SOR=0.446 GT:AD:DP:GQ:PL 0/1:16,17:33:99:497,0,477 chr1 227059459 . A T 444.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.613;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.85;ReadPosRankSum=0.905;SOR=0.527 GT:AD:DP:GQ:PL 0/1:22,19:41:99:473,0,613 chr1 227081135 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.29;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 227112576 . G A 99.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.765;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.09;ReadPosRankSum=0.060;SOR=1.518 GT:AD:DP:GQ:PL 0/1:5,4:9:99:128,0,178 chr1 227142787 . G T 455.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.21;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:484,36,0 chr1 227143058 . A G 4291.77 PASS AC=2;AF=1.00;AN=2;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.66;SOR=1.253 GT:AD:DP:GQ:PL 1/1:0,140:140:99:4320,417,0 chr1 227143082 . G C 1617.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.638;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=2.406;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=0.937;SOR=0.505 GT:AD:DP:GQ:PL 0/1:60,66:126:99:1646,0,1534 chr1 227145354 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.92;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 227147628 . T C 417.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.21;ReadPosRankSum=0.514;SOR=1.493 GT:AD:DP:GQ:PL 0/1:6,12:18:99:446,0,195 chr1 227160772 . T C 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 227186792 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 227193625 . C T 639.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.94;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:668,48,0 chr1 227193672 . G T 1087.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.28;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1116,90,0 chr1 227199442 . A G 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.82;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 227199660 . A G 1042.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.60;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1071,99,0 chr1 227228204 . A T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 227264339 . G A 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 227264658 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 227265143 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 227316912 . G C 639.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.74;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:668,48,0 chr1 227329654 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 227331972 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 227340841 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 227355733 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 227401241 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 227409075 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 227409714 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 227409718 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 227415506 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 227430445 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 227430849 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 227434024 . G C 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 227434310 . A G 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.56;ReadPosRankSum=0.414;SOR=0.269 GT:AD:DP:GQ:PL 0/1:8,4:12:99:131,0,297 chr1 227490763 . A G 203.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:24:232,24,0 chr1 227493082 . T C 422.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.09;QD=26.42;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:48:451,48,0 chr1 227493134 . C T 191.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=4.598;MLEAC=1;MLEAF=0.500;MQ=48.07;MQRankSum=1.680;QD=10.65;ReadPosRankSum=-1.583;SOR=1.221 GT:AD:DP:GQ:PL 0/1:9,9:18:99:220,0,200 chr1 227493167 . T C 596.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.08;QD=31.44;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,15:15:45:625,45,0 chr1 227493191 . T C 163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.501;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.25;MQRankSum=-0.140;QD=16.38;ReadPosRankSum=-0.253;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,8:10:54:192,0,54 chr1 227493774 . T C 2509.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.77;QD=34.86;SOR=1.483 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2538,216,0 chr1 227493872 . A C 1806.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=4.084;MLEAC=1;MLEAF=0.500;MQ=53.53;MQRankSum=-1.936;QD=19.64;ReadPosRankSum=0.564;SOR=0.380 GT:AD:DP:GQ:PL 0/1:45,47:92:99:1835,0,7001 chr1 227493873 . G C 1806.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.172;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=4.084;MLEAC=1;MLEAF=0.500;MQ=53.53;MQRankSum=-1.936;QD=19.64;ReadPosRankSum=0.855;SOR=0.380 GT:AD:DP:GQ:PL 0/1:45,47:92:99:1835,0,7001 chr1 227493880 . G A 1881.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.968;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=5.628;MLEAC=1;MLEAF=0.500;MQ=53.53;MQRankSum=-1.658;QD=20.45;ReadPosRankSum=1.015;SOR=0.287 GT:AD:DP:GQ:PL 0/1:46,46:92:99:1910,0,7242 chr1 227493884 . C T 1842.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.327;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=4.049;MLEAC=1;MLEAF=0.500;MQ=52.76;MQRankSum=-1.335;QD=19.60;ReadPosRankSum=0.370;SOR=0.349 GT:AD:DP:GQ:PL 0/1:47,47:94:99:1871,0,7103 chr1 227493885 . C T 1845.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.977;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=4.049;MLEAC=1;MLEAF=0.500;MQ=52.76;MQRankSum=-1.335;QD=19.64;ReadPosRankSum=0.111;SOR=0.349 GT:AD:DP:GQ:PL 0/1:47,47:94:99:1874,0,7031 chr1 227508154 . A G 142.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=25.99;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:170,12,0 chr1 227508223 . G C 405.77 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.34;QD=32.05;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:30:434,30,0 chr1 227508224 . G A 405.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.88;QD=29.48;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:30:434,30,0 chr1 227508301 . A G 294.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.79;QD=29.48;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:30:323,30,0 chr1 227508332 . T C 307.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.61;QD=30.78;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:30:336,30,0 chr1 227508409 . G A 217.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.11;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:246,21,0 chr1 227510593 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 227541210 . C T 218.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.32;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:247,18,0 chr1 227541299 . A G 651.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.63;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,22:22:66:680,66,0 chr1 227563901 . C A 522.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.50;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:551,42,0 chr1 227735380 . G A 7999.77 PASS AC=2;AF=1.00;AN=2;DP=246;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.52;SOR=1.028 GT:AD:DP:GQ:PL 1/1:0,246:246:99:8028,734,0 chr1 227816258 . C T 661.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.233;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=1.192;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.04;ReadPosRankSum=-0.459;SOR=0.990 GT:AD:DP:GQ:PL 0/1:25,19:44:99:690,0,1429 chr1 227816266 . G A 575.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.027;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.76;ReadPosRankSum=-0.341;SOR=0.741 GT:AD:DP:GQ:PL 0/1:23,16:39:99:604,0,1391 chr1 227816439 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 227845496 . A G 1670.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.229;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=3.091;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.92;ReadPosRankSum=-0.485;SOR=0.457 GT:AD:DP:GQ:PL 0/1:85,68:153:99:1699,0,2257 chr1 227889038 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 227889164 . G C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 227909641 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 227914028 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 227914107 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 227916080 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 227917610 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 227918068 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 227918530 . C A 65.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.217;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.22;ReadPosRankSum=1.242;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,4:8:92:94,0,92 chr1 227919438 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 227920959 . C T 101.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:129,12,0 chr1 227921231 . A G 1611.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.13;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1640,138,0 chr1 227924420 . A G 5850.77 PASS AC=2;AF=1.00;AN=2;DP=150;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.21;SOR=1.641 GT:AD:DP:GQ:PL 1/1:0,150:150:99:5879,451,0 chr1 227924430 . C T 1874.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.261;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=3.377;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.10;ReadPosRankSum=0.315;SOR=0.455 GT:AD:DP:GQ:PL 0/1:65,68:133:99:1903,0,1929 chr1 227924579 . T C 928.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.40;SOR=2.387 GT:AD:DP:GQ:PL 1/1:0,27:27:81:957,81,0 chr1 227925075 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 227925462 . A G 4906.77 PASS AC=2;AF=1.00;AN=2;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.07;SOR=1.798 GT:AD:DP:GQ:PL 1/1:0,144:144:99:4935,433,0 chr1 227936987 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 227941496 . T C 4261.77 PASS AC=2;AF=1.00;AN=2;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.30;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,128:128:99:4290,384,0 chr1 227941846 . C A 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=-1.732;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,179 chr1 227948198 . C T 64.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=-1.036;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:69:93,0,69 chr1 227968595 . A G 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.629;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=4.192;MLEAC=1;MLEAF=0.500;MQ=53.76;MQRankSum=-3.712;QD=5.28;ReadPosRankSum=-0.209;SOR=0.614 GT:AD:DP:GQ:PL 0/1:21,7:28:99:176,0,577 chr1 227969005 . G C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.53;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 227971210 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.253;SOR=0.859 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr1 227972472 . G A 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=0.366;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:109,0,143 chr1 227972831 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.96;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 227973712 . T C 670.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.61;QD=33.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:60:699,60,0 chr1 227977700 . T C 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.19;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.674;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:68:76,0,68 chr1 228016329 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 228022475 . C T 343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.92;ReadPosRankSum=0.088;SOR=1.473 GT:AD:DP:GQ:PL 0/1:5,10:15:99:372,0,164 chr1 228059650 . T C 388.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.77;ReadPosRankSum=1.127;SOR=1.061 GT:AD:DP:GQ:PL 0/1:3,11:14:82:417,0,82 chr1 228080166 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 228097542 . G A 4497.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.520;ClippingRankSum=0.000;DP=340;ExcessHet=3.0103;FS=1.784;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.23;ReadPosRankSum=-2.823;SOR=0.585 GT:AD:DP:GQ:PL 0/1:171,169:340:99:4526,0,4527 chr1 228098375 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.50;QD=33.19;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 228098377 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.50;QD=28.78;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 228098378 . A T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.50;QD=32.23;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 228098436 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.18;QD=28.37;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 228098440 . C A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.18;QD=32.07;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 228098443 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.18;QD=27.97;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 228098445 . T A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.18;QD=30.47;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 228098447 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.18;QD=31.86;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 228098469 . G C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.41;QD=25.92;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 228098476 . C T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.41;QD=23.25;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 228098477 . C A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.41;QD=28.03;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 228098478 . C T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.41;QD=35.00;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 228098485 . C T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.41;QD=31.51;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 228098486 . A G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.41;QD=30.04;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 228098490 . A T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.41;QD=34.63;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 228098501 . C T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.41;QD=34.19;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 228098508 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.41;QD=25.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 228098513 . C T 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.94;QD=27.83;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr1 228098517 . C T 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.94;MQRankSum=0.253;QD=13.95;ReadPosRankSum=-0.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:68:98,0,68 chr1 228098518 . G A 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.94;MQRankSum=0.253;QD=13.95;ReadPosRankSum=-0.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:68:98,0,68 chr1 228098519 . C T 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.94;MQRankSum=0.253;QD=13.95;ReadPosRankSum=-0.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:68:98,0,68 chr1 228102275 . A G 1907.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.420;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.55;ReadPosRankSum=-1.731;SOR=0.744 GT:AD:DP:GQ:PL 0/1:79,73:152:99:1936,0,2373 chr1 228106604 . G C 1219.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.121;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=1.104;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.84;ReadPosRankSum=0.328;SOR=0.965 GT:AD:DP:GQ:PL 0/1:37,40:77:99:1248,0,1073 chr1 228107881 . T C 1713.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.138;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=2.058;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.43;ReadPosRankSum=-1.914;SOR=0.531 GT:AD:DP:GQ:PL 0/1:85,65:150:99:1742,0,2253 chr1 228108928 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 228115383 . C T 68.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.030;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.73;ReadPosRankSum=0.000;SOR=1.022 GT:AD:DP:GQ:PL 0/1:8,4:12:97:97,0,184 chr1 228134806 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 228141846 . G A 1679.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.871;ClippingRankSum=0.000;DP=181;ExcessHet=3.0103;FS=0.586;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.28;ReadPosRankSum=-1.351;SOR=0.766 GT:AD:DP:GQ:PL 0/1:112,69:181:99:1708,0,3219 chr1 228146735 . G A 1160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.454;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=4.007;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.09;ReadPosRankSum=-0.977;SOR=1.697 GT:AD:DP:GQ:PL 0/1:58,38:96:99:1189,0,2031 chr1 228147770 . G T 703.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.409;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=2.201;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.73;ReadPosRankSum=-0.866;SOR=0.423 GT:AD:DP:GQ:PL 0/1:27,33:60:99:732,0,676 chr1 228154313 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 228164459 . T C 6690.77 PASS AC=2;AF=1.00;AN=2;DP=199;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.62;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,199:199:99:6719,597,0 chr1 228174512 . C G 468.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.21;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:497,36,0 chr1 228174981 . G A 1202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.643;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=2.849;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.51;ReadPosRankSum=-0.918;SOR=0.434 GT:AD:DP:GQ:PL 0/1:45,44:89:99:1231,0,1237 chr1 228203832 . T G 804.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.63;ReadPosRankSum=0.143;SOR=0.954 GT:AD:DP:GQ:PL 0/1:18,23:41:99:833,0,628 chr1 228204044 . C T 2967.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.053;ClippingRankSum=0.000;DP=260;ExcessHet=3.0103;FS=8.746;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.46;ReadPosRankSum=0.707;SOR=0.510 GT:AD:DP:GQ:PL 0/1:141,118:259:99:2996,0,3871 chr1 228211781 . C G 821.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.499;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=1.267;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.42;ReadPosRankSum=0.393;SOR=0.484 GT:AD:DP:GQ:PL 0/1:29,28:57:99:850,0,902 chr1 228212065 . T C 1221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.215;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=1.703;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.10;ReadPosRankSum=0.226;SOR=0.920 GT:AD:DP:GQ:PL 0/1:57,44:101:99:1250,0,1712 chr1 228212945 . T C 1746.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.428;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.851;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.47;ReadPosRankSum=-1.055;SOR=0.890 GT:AD:DP:GQ:PL 0/1:52,48:100:99:1775,0,3022 chr1 228212952 . A T 1617.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.465;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=1.886;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.58;ReadPosRankSum=-0.493;SOR=0.948 GT:AD:DP:GQ:PL 0/1:49,43:92:99:1646,0,2910 chr1 228214346 . A G 1918.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.603;ClippingRankSum=0.000;DP=148;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.96;ReadPosRankSum=-0.658;SOR=0.732 GT:AD:DP:GQ:PL 0/1:72,76:148:99:1947,0,1912 chr1 228214420 . A G 1469.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.666;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=4.070;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=1.245;SOR=1.193 GT:AD:DP:GQ:PL 0/1:46,51:97:99:1498,0,1107 chr1 228214582 . C G 543.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.64;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,15:15:45:572,45,0 chr1 228214807 . C T 3822.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.198;ClippingRankSum=0.000;DP=241;ExcessHet=3.0103;FS=1.950;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.86;ReadPosRankSum=0.346;SOR=0.887 GT:AD:DP:GQ:PL 0/1:112,129:241:99:3851,0,3266 chr1 228216196 . T C 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=0.000;SOR=0.991 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,73 chr1 228216967 . T C 299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.804;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=7.787;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.38;ReadPosRankSum=0.472;SOR=2.629 GT:AD:DP:GQ:PL 0/1:35,12:47:99:328,0,1078 chr1 228219309 . C T 2050.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.650;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=1.357;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.97;ReadPosRankSum=2.673;SOR=0.575 GT:AD:DP:GQ:PL 0/1:58,79:137:99:2079,0,1458 chr1 228219559 . G A 979.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.470;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=2.051;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.24;ReadPosRankSum=-0.731;SOR=1.091 GT:AD:DP:GQ:PL 0/1:37,37:74:99:1008,0,949 chr1 228224405 . T C 5263.77 PASS AC=2;AF=1.00;AN=2;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.69;SOR=1.762 GT:AD:DP:GQ:PL 1/1:0,161:161:99:5292,483,0 chr1 228224526 . T C 8714.77 PASS AC=2;AF=1.00;AN=2;DP=220;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.92;SOR=1.025 GT:AD:DP:GQ:PL 1/1:0,220:220:99:8743,665,0 chr1 228224527 . G A 3079.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.941;ClippingRankSum=0.000;DP=217;ExcessHet=3.0103;FS=1.052;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.19;ReadPosRankSum=1.432;SOR=0.772 GT:AD:DP:GQ:PL 0/1:112,105:217:99:3108,0,3240 chr1 228224607 . G A 8560.77 PASS AC=2;AF=1.00;AN=2;DP=231;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.01;SOR=1.440 GT:AD:DP:GQ:PL 1/1:0,230:230:99:8589,692,0 chr1 228224691 . C T 5397.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.566;ClippingRankSum=0.000;DP=398;ExcessHet=3.0103;FS=1.629;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.60;ReadPosRankSum=-0.468;SOR=0.601 GT:AD:DP:GQ:PL 0/1:194,203:397:99:5426,0,5394 chr1 228242996 . A G 862.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.218;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=4.549;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.14;ReadPosRankSum=1.012;SOR=0.242 GT:AD:DP:GQ:PL 0/1:32,29:61:99:891,0,1012 chr1 228243333 . A G 1144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.004;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=1.589;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.13;ReadPosRankSum=0.993;SOR=0.936 GT:AD:DP:GQ:PL 0/1:70,43:113:99:1173,0,1981 chr1 228243394 . A G 1741.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.221;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=8.449;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.42;ReadPosRankSum=-1.297;SOR=1.492 GT:AD:DP:GQ:PL 0/1:39,61:100:99:1770,0,1039 chr1 228243534 . G A 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.293;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.33;ReadPosRankSum=-0.843;SOR=0.859 GT:AD:DP:GQ:PL 0/1:21,9:30:99:218,0,651 chr1 228244229 . C T 4160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.740;ClippingRankSum=0.000;DP=328;ExcessHet=3.0103;FS=0.414;MLEAC=1;MLEAF=0.500;MQ=59.96;MQRankSum=-1.006;QD=12.69;ReadPosRankSum=0.446;SOR=0.733 GT:AD:DP:GQ:PL 0/1:166,162:328:99:4189,0,4428 chr1 228245159 . T C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.253;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 228245286 . G C 1305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.817;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=0.866;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.80;ReadPosRankSum=-0.145;SOR=0.851 GT:AD:DP:GQ:PL 0/1:54,48:102:99:1334,0,1472 chr1 228245516 . A G 2869.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.055;ClippingRankSum=0.000;DP=186;ExcessHet=3.0103;FS=8.790;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.51;ReadPosRankSum=-2.179;SOR=0.333 GT:AD:DP:GQ:PL 0/1:89,96:185:99:2898,0,2629 chr1 228245790 . T C 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=-0.524;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,137 chr1 228245855 . A T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 228246371 . C T 1778.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.456;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.44;ReadPosRankSum=-0.412;SOR=0.524 GT:AD:DP:GQ:PL 0/1:48,54:102:99:1807,0,1618 chr1 228246694 . T C 2166.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.333;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=2.506;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.17;ReadPosRankSum=0.485;SOR=0.963 GT:AD:DP:GQ:PL 0/1:61,73:134:99:2195,0,1698 chr1 228246766 . T C 2513.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=1.949 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2542,222,0 chr1 228246901 . A T 436.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.84;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:465,36,0 chr1 228249902 . T C 7293.77 PASS AC=2;AF=1.00;AN=2;DP=217;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.61;SOR=1.391 GT:AD:DP:GQ:PL 1/1:0,217:217:99:7322,652,0 chr1 228252178 . G A 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=-0.566;SOR=0.223 GT:AD:DP:GQ:PL 0/1:3,4:7:99:112,0,104 chr1 228256596 . T G 949.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.576;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=1.197;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.57;ReadPosRankSum=-0.077;SOR=1.042 GT:AD:DP:GQ:PL 0/1:38,32:70:99:978,0,1160 chr1 228256617 . T G 1005.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.321;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=2.166;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.89;ReadPosRankSum=-0.532;SOR=0.426 GT:AD:DP:GQ:PL 0/1:40,38:78:99:1034,0,1196 chr1 228256864 . T A 5597.77 PASS AC=2;AF=1.00;AN=2;DP=175;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=0.825 GT:AD:DP:GQ:PL 1/1:0,175:175:99:5626,525,0 chr1 228257040 . C T 757.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.994;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=3.505;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.62;ReadPosRankSum=1.007;SOR=0.275 GT:AD:DP:GQ:PL 0/1:17,26:43:99:786,0,513 chr1 228259812 . T G 5661.77 PASS AC=2;AF=1.00;AN=2;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.37;SOR=2.358 GT:AD:DP:GQ:PL 1/1:0,129:129:99:5690,388,0 chr1 228259818 . T A 5553.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.23;SOR=2.594 GT:AD:DP:GQ:PL 1/1:0,120:120:99:5582,379,0 chr1 228259820 . G C 1546.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.913;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=13.749;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.45;ReadPosRankSum=-0.347;SOR=0.148 GT:AD:DP:GQ:PL 0/1:60,55:115:99:1575,0,1919 chr1 228263861 . C G 254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=0.425;SOR=0.582 GT:AD:DP:GQ:PL 0/1:9,8:17:99:283,0,318 chr1 228264135 . C T 2372.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.893;ClippingRankSum=0.000;DP=205;ExcessHet=3.0103;FS=2.405;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.63;ReadPosRankSum=0.066;SOR=0.880 GT:AD:DP:GQ:PL 0/1:111,93:204:99:2401,0,2927 chr1 228268236 . T C 837.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.114;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.62;ReadPosRankSum=0.203;SOR=1.897 GT:AD:DP:GQ:PL 0/1:21,24:45:99:866,0,725 chr1 228268446 . T C 7389.77 PASS AC=2;AF=1.00;AN=2;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.53;SOR=0.731 GT:AD:DP:GQ:PL 1/1:0,214:214:99:7418,642,0 chr1 228269037 . A C 339.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.390;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.88;ReadPosRankSum=1.656;SOR=0.317 GT:AD:DP:GQ:PL 0/1:8,11:19:99:368,0,265 chr1 228271976 . C T 2679.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.829;ClippingRankSum=0.000;DP=178;ExcessHet=3.0103;FS=1.863;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.05;ReadPosRankSum=-1.164;SOR=0.821 GT:AD:DP:GQ:PL 0/1:79,99:178:99:2708,0,2017 chr1 228273428 . A G 5901.77 PASS AC=2;AF=1.00;AN=2;DP=179;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.97;SOR=1.257 GT:AD:DP:GQ:PL 1/1:0,179:179:99:5930,537,0 chr1 228273914 . G A 4797.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.204;ClippingRankSum=0.000;DP=352;ExcessHet=3.0103;FS=4.046;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.63;ReadPosRankSum=-0.571;SOR=0.522 GT:AD:DP:GQ:PL 0/1:169,183:352:99:4826,0,4473 chr1 228274056 . G A 3053.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.184;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.82;ReadPosRankSum=0.725;SOR=0.655 GT:AD:DP:GQ:PL 0/1:96,110:206:99:3082,0,2740 chr1 228274631 . G A 4469.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.163;ClippingRankSum=0.000;DP=310;ExcessHet=3.0103;FS=0.860;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.42;ReadPosRankSum=0.113;SOR=0.720 GT:AD:DP:GQ:PL 0/1:152,158:310:99:4498,0,4182 chr1 228274949 . C T 200.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.776;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.55;ReadPosRankSum=-0.275;SOR=0.495 GT:AD:DP:GQ:PL 0/1:9,7:16:99:229,0,328 chr1 228276334 . G T 187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.78;ReadPosRankSum=-0.096;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,6:10:99:216,0,137 chr1 228276399 . G A 410.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.538;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.21;ReadPosRankSum=0.175;SOR=0.990 GT:AD:DP:GQ:PL 0/1:12,15:27:99:439,0,318 chr1 228276547 . T G 3758.77 PASS AC=2;AF=1.00;AN=2;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.85;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,118:118:99:3787,353,0 chr1 228276575 . T C 3832.77 PASS AC=2;AF=1.00;AN=2;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,118:118:99:3861,354,0 chr1 228276615 . C G 1479.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.828;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=5.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=0.125;SOR=1.000 GT:AD:DP:GQ:PL 0/1:61,55:116:99:1508,0,1793 chr1 228277141 . C G 7230.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.386;ClippingRankSum=0.000;DP=248;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=29.39;ReadPosRankSum=-0.665;SOR=0.869 GT:AD:DP:GQ:PL 1/1:2,244:246:99:7259,667,0 chr1 228277350 . A G 1385.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.323;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=4.172;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.93;ReadPosRankSum=-1.295;SOR=1.239 GT:AD:DP:GQ:PL 0/1:40,47:87:99:1414,0,1243 chr1 228277645 . A G 4212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.383;ClippingRankSum=0.000;DP=321;ExcessHet=3.0103;FS=5.006;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.12;ReadPosRankSum=1.551;SOR=0.494 GT:AD:DP:GQ:PL 0/1:166,155:321:99:4241,0,4490 chr1 228277669 . T G 10506.77 PASS AC=2;AF=1.00;AN=2;DP=314;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.46;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,314:314:99:10535,943,0 chr1 228277988 . C T 626.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.791;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.29;ReadPosRankSum=0.601;SOR=0.646 GT:AD:DP:GQ:PL 0/1:21,20:41:99:655,0,751 chr1 228279049 . T C 4699.77 PASS AC=2;AF=1.00;AN=2;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.02;SOR=2.021 GT:AD:DP:GQ:PL 1/1:0,119:119:99:4728,358,0 chr1 228279386 . C T 2138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.349;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=6.005;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.26;ReadPosRankSum=1.258;SOR=1.133 GT:AD:DP:GQ:PL 0/1:73,77:150:99:2167,0,1879 chr1 228280368 . G A 3845.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.357;ClippingRankSum=0.000;DP=304;ExcessHet=3.0103;FS=1.882;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=-0.226;SOR=0.728 GT:AD:DP:GQ:PL 0/1:157,147:304:99:3874,0,4151 chr1 228280865 . A G 848.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.83;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:877,63,0 chr1 228281593 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.81;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 228281621 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.11;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 228283345 . C T 1519.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.645;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.784;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.52;ReadPosRankSum=0.190;SOR=0.874 GT:AD:DP:GQ:PL 0/1:46,46:92:99:1548,0,1598 chr1 228283678 . G C 2852.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.830;ClippingRankSum=0.000;DP=232;ExcessHet=3.0103;FS=1.637;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.30;ReadPosRankSum=-0.309;SOR=0.809 GT:AD:DP:GQ:PL 0/1:120,112:232:99:2881,0,3258 chr1 228287116 . G A 673.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.136;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=3.284;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.73;ReadPosRankSum=0.932;SOR=0.283 GT:AD:DP:GQ:PL 0/1:16,22:38:99:702,0,486 chr1 228287139 . G C 578.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.796;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=6.511;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.54;ReadPosRankSum=0.092;SOR=0.136 GT:AD:DP:GQ:PL 0/1:12,21:33:99:607,0,402 chr1 228288253 . C T 3185.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.168;ClippingRankSum=0.000;DP=225;ExcessHet=3.0103;FS=1.038;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.16;ReadPosRankSum=-0.680;SOR=0.769 GT:AD:DP:GQ:PL 0/1:110,115:225:99:3214,0,3023 chr1 228291540 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 228291541 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 228292581 . A G 9758.77 PASS AC=2;AF=1.00;AN=2;DP=297;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.97;SOR=0.777 GT:AD:DP:GQ:PL 1/1:0,296:296:99:9787,888,0 chr1 228293263 . A G 6304.77 PASS AC=2;AF=1.00;AN=2;DP=192;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.84;SOR=1.672 GT:AD:DP:GQ:PL 1/1:0,192:192:99:6333,575,0 chr1 228293850 . A G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 228294327 . G C 15290.77 PASS AC=2;AF=1.00;AN=2;DP=447;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.28;SOR=0.730 GT:AD:DP:GQ:PL 1/1:0,446:446:99:15319,1338,0 chr1 228294584 . T C 4036.77 PASS AC=2;AF=1.00;AN=2;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.77;SOR=1.377 GT:AD:DP:GQ:PL 1/1:0,115:115:99:4065,346,0 chr1 228297043 . T C 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=1.368;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 228298703 . C T 3474.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.900;ClippingRankSum=0.000;DP=288;ExcessHet=3.0103;FS=4.638;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.07;ReadPosRankSum=-0.281;SOR=0.946 GT:AD:DP:GQ:PL 0/1:153,135:288:99:3503,0,3958 chr1 228299083 . G A 848.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.42;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:877,63,0 chr1 228303960 . A G 2169.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.196;ClippingRankSum=0.000;DP=212;ExcessHet=3.0103;FS=0.559;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.23;ReadPosRankSum=1.767;SOR=0.606 GT:AD:DP:GQ:PL 0/1:127,85:212:99:2198,0,3612 chr1 228304729 . A G 1506.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.198;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=5.282;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.16;ReadPosRankSum=0.361;SOR=0.131 GT:AD:DP:GQ:PL 0/1:22,46:68:99:1535,0,713 chr1 228306656 . C T 2851.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.952;ClippingRankSum=0.000;DP=219;ExcessHet=3.0103;FS=3.120;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.02;ReadPosRankSum=0.195;SOR=0.929 GT:AD:DP:GQ:PL 0/1:101,118:219:99:2880,0,2478 chr1 228306681 . T C 6888.77 PASS AC=2;AF=1.00;AN=2;DP=174;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.44;SOR=1.259 GT:AD:DP:GQ:PL 1/1:0,174:174:99:6917,544,0 chr1 228306737 . C T 3639.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.72;SOR=2.376 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3668,291,0 chr1 228306995 . G A 4485.77 PASS AC=2;AF=1.00;AN=2;DP=130;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,130:130:99:4514,390,0 chr1 228307963 . T A 2117.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.70;SOR=6.593 GT:AD:DP:GQ:PL 1/1:0,54:54:99:2146,161,0 chr1 228307995 . T C 3450.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.48;SOR=3.889 GT:AD:DP:GQ:PL 1/1:0,93:93:99:3479,278,0 chr1 228308313 . G A 7609.77 PASS AC=2;AF=1.00;AN=2;DP=213;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.00;SOR=1.725 GT:AD:DP:GQ:PL 1/1:0,212:212:99:7638,637,0 chr1 228308365 . G T 1596.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.457;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=1.488;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.10;ReadPosRankSum=1.596;SOR=0.556 GT:AD:DP:GQ:PL 0/1:71,61:132:99:1625,0,1958 chr1 228308447 . C T 560.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.146;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=2.020;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.04;ReadPosRankSum=1.323;SOR=1.238 GT:AD:DP:GQ:PL 0/1:25,18:43:99:589,0,783 chr1 228309052 . G A 976.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.469;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.908;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.76;ReadPosRankSum=-0.533;SOR=0.861 GT:AD:DP:GQ:PL 0/1:35,36:71:99:1005,0,898 chr1 228309352 . A G 9483.77 PASS AC=2;AF=1.00;AN=2;DP=277;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.36;SOR=0.987 GT:AD:DP:GQ:PL 1/1:0,276:276:99:9512,829,0 chr1 228309769 . A G 604.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.45;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:633,48,0 chr1 228315976 . A G 8009.77 PASS AC=2;AF=1.00;AN=2;DP=259;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.05;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,258:258:99:8038,774,0 chr1 228316162 . C T 1558.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.189;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=2.525;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.30;ReadPosRankSum=1.446;SOR=0.990 GT:AD:DP:GQ:PL 0/1:49,60:109:99:1587,0,1221 chr1 228316771 . T C 4887.77 PASS AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.18;SOR=1.260 GT:AD:DP:GQ:PL 1/1:0,143:143:99:4916,430,0 chr1 228316885 . C G 2438.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.587;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=7.812;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.94;ReadPosRankSum=-1.078;SOR=1.228 GT:AD:DP:GQ:PL 0/1:87,88:175:99:2467,0,3365 chr1 228316890 . C A 2140.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.508;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=7.870;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.23;ReadPosRankSum=1.300;SOR=0.344 GT:AD:DP:GQ:PL 0/1:88,87:175:99:2169,0,3448 chr1 228316949 . G A 1340.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.135;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.56;ReadPosRankSum=0.745;SOR=0.662 GT:AD:DP:GQ:PL 0/1:62,54:116:99:1369,0,1738 chr1 228316968 . G A 1399.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.063;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.946;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.55;ReadPosRankSum=-0.704;SOR=0.531 GT:AD:DP:GQ:PL 0/1:42,48:90:99:1428,0,1211 chr1 228317503 . G A 3006.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,94:94:99:3035,282,0 chr1 228317818 . G A 747.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.082;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=4.055;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=-0.208;SOR=0.706 GT:AD:DP:GQ:PL 0/1:22,27:49:99:776,0,601 chr1 228317967 . C G 3398.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.91;SOR=1.760 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3427,291,0 chr1 228317998 . T C 3957.77 PASS AC=2;AF=1.00;AN=2;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.12;SOR=1.290 GT:AD:DP:GQ:PL 1/1:0,116:116:99:3986,348,0 chr1 228318038 . G A 1554.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.693;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=1.324;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.03;ReadPosRankSum=1.329;SOR=0.568 GT:AD:DP:GQ:PL 0/1:72,69:141:99:1583,0,1854 chr1 228321726 . A G 19586.77 PASS AC=2;AF=1.00;AN=2;DP=597;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.81;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,597:597:99:19615,1792,0 chr1 228323744 . G A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 228334043 . C T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 228334386 . G A 1040.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.940;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=1.382;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.26;ReadPosRankSum=-0.445;SOR=1.132 GT:AD:DP:GQ:PL 0/1:24,33:57:99:1069,0,695 chr1 228335746 . T C 7139.77 PASS AC=2;AF=1.00;AN=2;DP=220;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.45;SOR=1.253 GT:AD:DP:GQ:PL 1/1:0,220:220:99:7168,660,0 chr1 228335893 . A G 2949.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.480;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=1.284;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.48;ReadPosRankSum=-0.577;SOR=0.819 GT:AD:DP:GQ:PL 0/1:76,103:179:99:2978,0,2005 chr1 228336907 . A G 840.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.733;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=3.167;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.16;ReadPosRankSum=0.417;SOR=0.289 GT:AD:DP:GQ:PL 0/1:21,28:49:99:869,0,650 chr1 228337307 . G A 3890.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.491;ClippingRankSum=0.000;DP=311;ExcessHet=3.0103;FS=0.417;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.55;ReadPosRankSum=-0.297;SOR=0.655 GT:AD:DP:GQ:PL 0/1:158,152:310:99:3919,0,4356 chr1 228337506 . C T 460.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.728;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.46;ReadPosRankSum=-0.144;SOR=1.721 GT:AD:DP:GQ:PL 0/1:14,14:28:99:489,0,466 chr1 228338197 . C G 2616.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.021;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=8.406;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.77;ReadPosRankSum=0.020;SOR=0.397 GT:AD:DP:GQ:PL 0/1:68,88:156:99:2645,0,1929 chr1 228338310 . C T 2693.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.215;ClippingRankSum=0.000;DP=198;ExcessHet=3.0103;FS=4.923;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.74;ReadPosRankSum=-1.043;SOR=0.649 GT:AD:DP:GQ:PL 0/1:97,99:196:99:2722,0,2633 chr1 228340862 . C G 7048.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.864;ClippingRankSum=0.000;DP=526;ExcessHet=3.0103;FS=1.869;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.40;ReadPosRankSum=-0.168;SOR=0.834 GT:AD:DP:GQ:PL 0/1:265,261:526:99:7077,0,7022 chr1 228341428 . C A 1668.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.004;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=2.358;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.26;ReadPosRankSum=-1.390;SOR=0.565 GT:AD:DP:GQ:PL 0/1:62,55:117:99:1697,0,1909 chr1 228350241 . T C 388.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.36;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:417,30,0 chr1 228350769 . C G 741.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.204;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=0.944;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.30;ReadPosRankSum=1.506;SOR=0.854 GT:AD:DP:GQ:PL 0/1:40,32:72:99:770,0,1042 chr1 228351128 . C T 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=1.282;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:26:152,0,26 chr1 228351599 . G A 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=-0.967;SOR=0.346 GT:AD:DP:GQ:PL 0/1:8,8:16:99:218,0,218 chr1 228352841 . G A 123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.803;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.38;ReadPosRankSum=1.383;SOR=0.527 GT:AD:DP:GQ:PL 0/1:4,6:10:99:152,0,137 chr1 228353222 . C T 339.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.025;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=1.564;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.33;ReadPosRankSum=0.052;SOR=0.412 GT:AD:DP:GQ:PL 0/1:17,13:30:99:368,0,524 chr1 228353349 . G A 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=-1.068;SOR=0.223 GT:AD:DP:GQ:PL 0/1:3,4:7:99:112,0,104 chr1 228356099 . C T 1411.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.482;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=5.003;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.28;ReadPosRankSum=-0.211;SOR=0.350 GT:AD:DP:GQ:PL 0/1:60,55:115:99:1440,0,1650 chr1 228359555 . G A 1075.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.533;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=1.738;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.82;ReadPosRankSum=-0.348;SOR=0.900 GT:AD:DP:GQ:PL 0/1:48,43:91:99:1104,0,1425 chr1 228360126 . G C 1701.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.584;ClippingRankSum=0.000;DP=188;ExcessHet=3.0103;FS=0.556;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.05;ReadPosRankSum=0.125;SOR=0.613 GT:AD:DP:GQ:PL 0/1:114,74:188:99:1730,0,3364 chr1 228360200 . C T 3007.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.611;ClippingRankSum=0.000;DP=223;ExcessHet=3.0103;FS=6.694;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=-0.031;SOR=0.863 GT:AD:DP:GQ:PL 0/1:139,84:223:99:3036,0,5813 chr1 228360212 . G A 3056.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.804;ClippingRankSum=0.000;DP=215;ExcessHet=3.0103;FS=4.807;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.22;ReadPosRankSum=-0.807;SOR=0.772 GT:AD:DP:GQ:PL 0/1:130,85:215:99:3085,0,5574 chr1 228360496 . G A 2870.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.906;ClippingRankSum=0.000;DP=202;ExcessHet=3.0103;FS=1.948;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.21;ReadPosRankSum=-0.648;SOR=0.544 GT:AD:DP:GQ:PL 0/1:107,95:202:99:2899,0,3596 chr1 228362725 . C T 2034.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.453;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=3.513;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.74;ReadPosRankSum=-1.362;SOR=0.434 GT:AD:DP:GQ:PL 0/1:64,74:138:99:2063,0,1986 chr1 228362902 . G A 566.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.864;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=1.953;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.89;ReadPosRankSum=0.857;SOR=0.314 GT:AD:DP:GQ:PL 0/1:8,22:30:99:595,0,203 chr1 228362949 . T A 99.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.352;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.67;ReadPosRankSum=1.352;SOR=1.508 GT:AD:DP:GQ:PL 0/1:9,4:13:99:128,0,269 chr1 228363770 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 228363784 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.27;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 228363787 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.83;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 228363816 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.66;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 228363823 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.47;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 228363859 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 228364870 . T C 582.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.042;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.43;ReadPosRankSum=0.905;SOR=0.627 GT:AD:DP:GQ:PL 0/1:27,24:51:99:611,0,632 chr1 228364909 . G A 658.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.595;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.995;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.76;ReadPosRankSum=-0.740;SOR=0.846 GT:AD:DP:GQ:PL 0/1:30,26:56:99:687,0,787 chr1 228365163 . C T 635.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.074;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.14;ReadPosRankSum=1.514;SOR=0.544 GT:AD:DP:GQ:PL 0/1:19,23:42:99:664,0,526 chr1 228365950 . T C 1897.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.141;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=9.100;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=-1.242;SOR=2.427 GT:AD:DP:GQ:PL 0/1:66,56:122:99:1926,0,2204 chr1 228369087 . C T 1561.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.245;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=0.801;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.60;ReadPosRankSum=0.028;SOR=0.870 GT:AD:DP:GQ:PL 0/1:52,55:107:99:1590,0,1470 chr1 228369365 . A G 856.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.936;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=4.923;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=0.292;SOR=0.317 GT:AD:DP:GQ:PL 0/1:36,33:69:99:885,0,1058 chr1 228371106 . C T 1093.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.331;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=4.208;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.18;ReadPosRankSum=1.845;SOR=1.206 GT:AD:DP:GQ:PL 0/1:42,41:83:99:1122,0,1129 chr1 228372293 . C T 6322.77 PASS AC=2;AF=1.00;AN=2;DP=196;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.26;SOR=0.916 GT:AD:DP:GQ:PL 1/1:0,196:196:99:6351,588,0 chr1 228372438 . A G 3225.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.37;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,89:89:99:3254,268,0 chr1 228372999 . T C 4100.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.61;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,122:122:99:4129,366,0 chr1 228373289 . G A 552.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.31;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:581,42,0 chr1 228376798 . G A 2324.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.181;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=2.169;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.97;ReadPosRankSum=1.917;SOR=0.878 GT:AD:DP:GQ:PL 0/1:75,62:137:99:2353,0,4042 chr1 228376803 . G A 2318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.217;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=2.134;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.56;ReadPosRankSum=1.884;SOR=0.899 GT:AD:DP:GQ:PL 0/1:78,62:140:99:2347,0,4096 chr1 228400979 . A C 554.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.252;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.41;ReadPosRankSum=0.894;SOR=0.663 GT:AD:DP:GQ:PL 0/1:17,19:36:99:583,0,500 chr1 228405480 . C G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 228411367 . C T 99.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.736;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.67;ReadPosRankSum=-0.026;SOR=0.804 GT:AD:DP:GQ:PL 0/1:9,4:13:99:128,0,302 chr1 228413937 . T C 5478.77 PASS AC=2;AF=1.00;AN=2;DP=176;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.13;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,176:176:99:5507,528,0 chr1 228424743 . A G 1108.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.08;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1137,84,0 chr1 228425137 . G T 3346.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.22;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,88:88:99:3375,264,0 chr1 228425191 . G A 1454.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.554;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.841;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.74;ReadPosRankSum=-1.402;SOR=0.832 GT:AD:DP:GQ:PL 0/1:37,45:82:99:1483,0,1082 chr1 228425351 . T C 4912.77 PASS AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.42;SOR=0.852 GT:AD:DP:GQ:PL 1/1:0,147:147:99:4941,441,0 chr1 228443278 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 228443285 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 228449123 . T G 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr1 228457155 . G A 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.26;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:62,0,33 chr1 228457362 . A G 3661.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=2.618 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3690,309,0 chr1 228457455 . C A 2738.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.093;ClippingRankSum=0.000;DP=211;ExcessHet=3.0103;FS=1.061;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.98;ReadPosRankSum=-0.057;SOR=0.786 GT:AD:DP:GQ:PL 0/1:104,107:211:99:2767,0,2688 chr1 228464079 . C T 378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.885;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.63;ReadPosRankSum=-1.887;SOR=0.384 GT:AD:DP:GQ:PL 0/1:18,12:30:99:407,0,642 chr1 228478139 . G T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 228483491 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 228487869 . G C 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.364;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.276;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.41;ReadPosRankSum=-0.773;SOR=1.170 GT:AD:DP:GQ:PL 0/1:8,6:14:99:174,0,190 chr1 228493287 . C T 209.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=0.809;SOR=0.368 GT:AD:DP:GQ:PL 0/1:11,7:18:99:238,0,397 chr1 228493379 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 228510952 . G A 135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.05;ReadPosRankSum=-0.146;SOR=0.050 GT:AD:DP:GQ:PL 0/1:10,5:15:99:164,0,372 chr1 228511776 . T C 3957.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.581;ClippingRankSum=0.000;DP=310;ExcessHet=3.0103;FS=0.860;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.77;ReadPosRankSum=0.326;SOR=0.755 GT:AD:DP:GQ:PL 0/1:161,149:310:99:3986,0,4282 chr1 228541721 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 228650058 . C T 966.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.869;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=6.960;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.79;ReadPosRankSum=0.700;SOR=0.227 GT:AD:DP:GQ:PL 0/1:40,42:82:99:995,0,1170 chr1 228687524 . T G 262.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.90;MQRankSum=-0.887;QD=32.85;ReadPosRankSum=1.534;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,7:8:21:291,0,21 chr1 228687533 . C A 262.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.90;MQRankSum=-0.887;QD=32.85;ReadPosRankSum=0.887;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,7:8:21:291,0,21 chr1 228687546 . T C 156.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.90;MQRankSum=-0.887;QD=19.60;ReadPosRankSum=-0.157;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,7:8:18:185,0,18 chr1 228687575 . G A 157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.862;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.87;MQRankSum=-1.732;QD=17.53;ReadPosRankSum=0.719;SOR=0.941 GT:AD:DP:GQ:PL 0/1:2,7:9:64:186,0,64 chr1 228687588 . T C 301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.40;MQRankSum=-1.834;QD=30.18;ReadPosRankSum=-0.253;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,8:10:99:330,0,101 chr1 228687590 . A G 343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.40;MQRankSum=-1.834;QD=34.38;ReadPosRankSum=-0.253;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,8:10:98:372,0,98 chr1 228687593 . T C 343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.660;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.02;MQRankSum=-1.922;QD=31.25;ReadPosRankSum=-0.551;SOR=0.892 GT:AD:DP:GQ:PL 0/1:2,9:11:98:372,0,98 chr1 228687602 . A G 301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.40;MQRankSum=-1.834;QD=30.18;ReadPosRankSum=-0.493;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,8:10:99:330,0,101 chr1 228687641 . C T 217.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.64;MQRankSum=-2.100;QD=27.22;ReadPosRankSum=-0.619;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,6:8:99:246,0,107 chr1 228687650 . A G 217.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.64;MQRankSum=-2.100;QD=27.22;ReadPosRankSum=-0.319;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,6:8:99:246,0,107 chr1 228687656 . C T 175.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.29;MQRankSum=-1.981;QD=25.11;ReadPosRankSum=0.366;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:99:204,0,110 chr1 228687662 . T C 175.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.17;MQRankSum=-1.834;QD=29.29;ReadPosRankSum=0.842;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,4:6:99:204,0,110 chr1 228687665 . G A 133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=43.36;MQRankSum=-1.282;QD=26.75;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:99:162,0,113 chr1 228687683 . A G 136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=43.36;MQRankSum=-1.282;QD=27.35;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:30:165,0,30 chr1 228687684 . C T 136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=43.36;MQRankSum=-1.282;QD=27.35;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:30:165,0,30 chr1 228687689 . C T 136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=43.36;MQRankSum=-1.282;QD=27.35;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:30:165,0,30 chr1 228687694 . A G 136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=43.36;MQRankSum=-1.282;QD=27.35;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:30:165,0,30 chr1 228687696 . A G 136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=43.36;MQRankSum=-1.282;QD=27.35;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:30:165,0,30 chr1 228687698 . G A 136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=43.36;MQRankSum=-1.282;QD=27.35;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:30:165,0,30 chr1 228687708 . G T 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.94;MQRankSum=-1.150;QD=23.69;ReadPosRankSum=0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:33:123,0,33 chr1 228687713 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.61;MQRankSum=-0.967;QD=17.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:36:81,0,36 chr1 228687720 . T C 52.77 PASS AC=1;AF=0.500;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.00;QD=26.38;SOR=2.303 GT:AD:DP:GQ:PL 0/1:0,2:2:36:81,0,36 chr1 228687728 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 228703257 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 228703259 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 228758094 . T A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 228770012 . C A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 228802852 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 228811964 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 228811966 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 228830702 . T G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 228953446 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 228988251 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 229042311 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 229058727 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 229120885 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 229121005 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 229129496 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 229147738 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 229179778 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.40;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 229179784 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.40;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 229194009 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 229194086 . C A 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 229249509 . G A 167.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.32;ReadPosRankSum=2.051;SOR=0.859 GT:AD:DP:GQ:PL 0/1:12,6:18:99:196,0,445 chr1 229249660 . G C 1649.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.016;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=1.281;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.25;ReadPosRankSum=0.385;SOR=0.821 GT:AD:DP:GQ:PL 0/1:93,68:161:99:1678,0,2479 chr1 229264900 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 229271486 . G C 978.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.75;SOR=2.546 GT:AD:DP:GQ:PL 1/1:0,29:29:86:1007,86,0 chr1 229286446 . T C 674.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.13;SOR=1.828 GT:AD:DP:GQ:PL 1/1:0,21:21:63:703,63,0 chr1 229295508 . T C 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 229299251 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 229303081 . G A 1682.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.59;SOR=4.664 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1711,129,0 chr1 229325277 . C T 3701.77 PASS AC=2;AF=1.00;AN=2;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,118:118:99:3730,353,0 chr1 229327651 . C T 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.91;ReadPosRankSum=0.663;SOR=0.188 GT:AD:DP:GQ:PL 0/1:10,4:14:99:125,0,371 chr1 229331877 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 229351024 . G C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 229383821 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr1 229383827 . T C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr1 229403346 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 229426063 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:59:72,0,59 chr1 229432484 . T G 1021.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.33;SOR=3.098 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1050,78,0 chr1 229464579 . T C 400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.70;ReadPosRankSum=1.962;SOR=0.693 GT:AD:DP:GQ:PL 0/1:12,12:24:99:429,0,429 chr1 229594705 . G A 17132.77 PASS AC=2;AF=1.00;AN=2;DP=517;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.14;SOR=1.130 GT:AD:DP:GQ:PL 1/1:0,517:517:99:17161,1552,0 chr1 229596357 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 229596510 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 229596544 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 229602423 . T G 9578.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.949;ClippingRankSum=0.000;DP=288;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=33.26;ReadPosRankSum=1.077;SOR=0.282 GT:AD:DP:GQ:PL 1/1:1,287:288:99:9607,823,0 chr1 229602489 . G A 9842.77 PASS AC=2;AF=1.00;AN=2;DP=294;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.48;SOR=0.707 GT:AD:DP:GQ:PL 1/1:0,294:294:99:9871,883,0 chr1 229610024 . T C 352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.771;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=3.222;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.03;ReadPosRankSum=1.366;SOR=2.636 GT:AD:DP:GQ:PL 0/1:11,11:22:99:381,0,359 chr1 229610272 . C T 3700.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.46;SOR=1.781 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3729,341,0 chr1 229614596 . T G 3299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.762;ClippingRankSum=0.000;DP=258;ExcessHet=3.0103;FS=4.704;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.79;ReadPosRankSum=-0.542;SOR=0.462 GT:AD:DP:GQ:PL 0/1:131,127:258:99:3328,0,3526 chr1 229626307 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 229632550 . C T 691.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.59;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,20:20:60:720,60,0 chr1 229636946 . T G 5632.77 PASS AC=2;AF=1.00;AN=2;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.41;SOR=1.017 GT:AD:DP:GQ:PL 1/1:0,154:154:99:5661,462,0 chr1 229643871 . G A 352.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:381,30,0 chr1 229644634 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 229644967 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 229645785 . T G 2664.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.34;SOR=3.706 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2693,213,0 chr1 229645997 . T C 8434.77 PASS AC=2;AF=1.00;AN=2;DP=269;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.36;SOR=1.064 GT:AD:DP:GQ:PL 1/1:0,269:269:99:8463,807,0 chr1 229647489 . T C 4652.77 PASS AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.90;SOR=1.094 GT:AD:DP:GQ:PL 1/1:0,104:104:99:4681,316,0 chr1 229647493 . T C 4849.77 PASS AC=2;AF=1.00;AN=2;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.60;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,108:108:99:4878,331,0 chr1 229654301 . A G 8444.77 PASS AC=2;AF=1.00;AN=2;DP=260;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,260:260:99:8473,781,0 chr1 229659323 . T G 4418.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.957;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.73;ReadPosRankSum=1.311;SOR=0.610 GT:AD:DP:GQ:PL 1/1:1,134:135:99:4447,395,0 chr1 229661132 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 229661172 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 229663127 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 229674513 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 229689023 . T C 313.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.473;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=3.755;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.07;ReadPosRankSum=0.244;SOR=0.223 GT:AD:DP:GQ:PL 0/1:10,14:24:99:342,0,277 chr1 229689231 . C T 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=0.508;SOR=1.981 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,106 chr1 229689963 . C G 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 229695856 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 229695857 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 229705392 . C T 250.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.705;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=3.274;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.75;ReadPosRankSum=-1.115;SOR=0.084 GT:AD:DP:GQ:PL 0/1:8,9:17:99:279,0,259 chr1 229705685 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr1 229710052 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 229780992 . T G 62.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:90,9,0 chr1 229783506 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 229784841 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 229796794 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 229800820 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 229800892 . C T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 230051779 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 230051830 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 230060418 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 230068204 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 230118687 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 230145321 . G A 58.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:86,6,0 chr1 230146960 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 230158438 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 230167865 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 230168102 . T G 62.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:90,9,0 chr1 230236137 . G A 1934.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.005;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=1.377;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.33;ReadPosRankSum=-0.125;SOR=0.846 GT:AD:DP:GQ:PL 0/1:67,68:135:99:1963,0,1938 chr1 230248836 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 230249191 . T C 2140.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.513;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=1.142;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.57;ReadPosRankSum=0.423;SOR=0.602 GT:AD:DP:GQ:PL 0/1:95,90:185:99:2169,0,2510 chr1 230249306 . G T 894.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.870;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=1.292;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.67;ReadPosRankSum=-1.204;SOR=1.048 GT:AD:DP:GQ:PL 0/1:29,32:61:99:923,0,893 chr1 230249402 . C T 64.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.501;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.48;ReadPosRankSum=-0.623;SOR=0.078 GT:AD:DP:GQ:PL 0/1:6,4:10:93:93,0,221 chr1 230250428 . C T 1254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.775;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=1.015;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.30;ReadPosRankSum=0.202;SOR=0.512 GT:AD:DP:GQ:PL 0/1:40,42:82:99:1283,0,1153 chr1 230262356 . A G 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr1 230262956 . A G 808.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.417;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=7.849;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.08;ReadPosRankSum=0.081;SOR=1.360 GT:AD:DP:GQ:PL 0/1:42,31:73:99:837,0,1092 chr1 230279279 . A G 3753.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.974;ClippingRankSum=0.000;DP=314;ExcessHet=3.0103;FS=3.696;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.95;ReadPosRankSum=0.915;SOR=0.898 GT:AD:DP:GQ:PL 0/1:170,144:314:99:3782,0,4442 chr1 230279547 . C T 513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.146;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.35;ReadPosRankSum=0.680;SOR=0.836 GT:AD:DP:GQ:PL 0/1:13,15:28:99:542,0,437 chr1 230292094 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 230316232 . G A 251.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.038;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.95;ReadPosRankSum=0.730;SOR=0.917 GT:AD:DP:GQ:PL 0/1:13,10:23:99:280,0,338 chr1 230325026 . T C 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=-2.241;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,262 chr1 230325677 . C G 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.73;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr1 230333211 . G T 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=1.550;SOR=0.120 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,217 chr1 230337357 . A C 620.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.574;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=5.430;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.93;ReadPosRankSum=0.931;SOR=1.678 GT:AD:DP:GQ:PL 0/1:29,19:48:99:649,0,852 chr1 230343010 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 230362068 . A G 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.69;ReadPosRankSum=0.148;SOR=0.283 GT:AD:DP:GQ:PL 0/1:14,3:17:74:74,0,533 chr1 230362082 . A G 175.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.99;ReadPosRankSum=-1.261;SOR=0.569 GT:AD:DP:GQ:PL 0/1:16,6:22:99:204,0,1120 chr1 230362083 . C A 175.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.99;ReadPosRankSum=-1.162;SOR=0.569 GT:AD:DP:GQ:PL 0/1:16,6:22:99:204,0,1120 chr1 230362098 . C G 342.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.177;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=2.905;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.82;ReadPosRankSum=-2.138;SOR=1.702 GT:AD:DP:GQ:PL 0/1:18,11:29:99:371,0,631 chr1 230362194 . G T 2594.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.434;ClippingRankSum=0.000;DP=182;ExcessHet=3.0103;FS=4.244;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.34;ReadPosRankSum=0.971;SOR=1.060 GT:AD:DP:GQ:PL 0/1:88,93:181:99:2623,0,2530 chr1 230362486 . C T 1391.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.661;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.84;ReadPosRankSum=-0.109;SOR=0.804 GT:AD:DP:GQ:PL 0/1:37,41:78:99:1420,0,1277 chr1 230367938 . C T 1422.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.838;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=6.268;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.46;ReadPosRankSum=0.841;SOR=1.460 GT:AD:DP:GQ:PL 0/1:43,49:92:99:1451,0,1177 chr1 230368324 . C G 220.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.265;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=-1.647;SOR=0.582 GT:AD:DP:GQ:PL 0/1:9,8:17:99:249,0,325 chr1 230377382 . G A 1187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.452;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.70;ReadPosRankSum=0.253;SOR=0.693 GT:AD:DP:GQ:PL 0/1:67,44:111:99:1216,0,1873 chr1 230393044 . G A 120.41 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=4.771;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=20.07;ReadPosRankSum=-0.431;SOR=1.872 GT:AD:DP:GQ:PL 1/1:1,5:6:8:148,8,0 chr1 230393074 . C T 99.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.63;ReadPosRankSum=0.674;SOR=1.872 GT:AD:DP:GQ:PL 0/1:1,5:6:24:128,0,24 chr1 230393146 . A G 104.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.46;ReadPosRankSum=-0.431;SOR=0.941 GT:AD:DP:GQ:PL 0/1:1,5:6:24:133,0,24 chr1 230399802 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 230401816 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 230401843 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 230497995 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 230504011 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 230538289 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 230571122 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 230571202 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 230583870 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 230583875 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 230618476 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 230618501 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 230642745 . G C 4819.77 PASS AC=2;AF=1.00;AN=2;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.43;SOR=2.203 GT:AD:DP:GQ:PL 1/1:0,140:140:99:4848,420,0 chr1 230645728 . C G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 230645792 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 230659431 . T C 2129.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.28;SOR=2.531 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2158,191,0 chr1 230660580 . A G 307.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=-0.030;SOR=0.317 GT:AD:DP:GQ:PL 0/1:17,10:27:99:336,0,629 chr1 230678922 . A G 1123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.926;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=7.289;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.87;ReadPosRankSum=0.435;SOR=1.338 GT:AD:DP:GQ:PL 0/1:37,44:81:99:1152,0,859 chr1 230682665 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 230684859 . G T 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=0.217;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:109,0,143 chr1 230684884 . G A 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.691;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.48;ReadPosRankSum=-1.139;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,8:12:97:298,0,97 chr1 230686725 . C A 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr1 230686861 . G A 178.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.331;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.702;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.52;ReadPosRankSum=-0.087;SOR=0.148 GT:AD:DP:GQ:PL 0/1:10,7:17:99:207,0,332 chr1 230689701 . T C 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=0.887;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr1 230693127 . A G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.253;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 230693393 . A G 2442.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.210;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.57;ReadPosRankSum=-0.628;SOR=0.684 GT:AD:DP:GQ:PL 0/1:53,86:139:99:2471,0,1387 chr1 230705763 . A G 1683.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=7.523 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1712,126,0 chr1 230705813 . G A 1358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.354;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=19.820;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.61;ReadPosRankSum=0.184;SOR=3.564 GT:AD:DP:GQ:PL 0/1:52,41:93:99:1387,0,1571 chr1 230705941 . T C 12801.77 PASS AC=2;AF=1.00;AN=2;DP=392;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,390:390:99:12830,1171,0 chr1 230710048 . A G 9782.77 PASS AC=2;AF=1.00;AN=2;DP=306;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.97;SOR=1.109 GT:AD:DP:GQ:PL 1/1:0,306:306:99:9811,917,0 chr1 230710231 . G A 3191.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.323;ClippingRankSum=0.000;DP=221;ExcessHet=3.0103;FS=6.510;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.51;ReadPosRankSum=-0.623;SOR=0.674 GT:AD:DP:GQ:PL 0/1:119,101:220:99:3220,0,3733 chr1 230714505 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 230719446 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 230719470 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 230719471 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 230747738 . T C 2784.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.708;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=1.300;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.47;ReadPosRankSum=-0.632;SOR=0.559 GT:AD:DP:GQ:PL 0/1:81,99:180:99:2813,0,2270 chr1 230747753 . T C 2329.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.029;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.47;ReadPosRankSum=1.196;SOR=0.653 GT:AD:DP:GQ:PL 0/1:76,85:161:99:2358,0,2024 chr1 230747823 . G T 961.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.222;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=5.116;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.33;ReadPosRankSum=1.748;SOR=0.204 GT:AD:DP:GQ:PL 0/1:45,33:78:99:990,0,1538 chr1 230747910 . C G 148.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.158;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.44;ReadPosRankSum=1.023;SOR=0.551 GT:AD:DP:GQ:PL 0/1:7,6:13:99:177,0,206 chr1 230747958 . C T 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-0.967;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr1 230753826 . A G 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.108;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.45;MQRankSum=-0.792;QD=5.97;ReadPosRankSum=-1.465;SOR=0.446 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,100 chr1 230757854 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 230757862 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 230761527 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 230761529 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 230762485 . T A 740.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.177;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.12;ReadPosRankSum=1.606;SOR=0.610 GT:AD:DP:GQ:PL 0/1:23,26:49:99:769,0,645 chr1 230762748 . C T 2096.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.053;ClippingRankSum=0.000;DP=232;ExcessHet=3.0103;FS=0.496;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.12;ReadPosRankSum=0.818;SOR=0.648 GT:AD:DP:GQ:PL 0/1:144,86:230:99:2125,0,4050 chr1 230762991 . G C 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=-0.439;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,180 chr1 230767488 . A G 307.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.167;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.28;ReadPosRankSum=0.139;SOR=0.522 GT:AD:DP:GQ:PL 0/1:35,14:49:99:336,0,1066 chr1 230767604 . T C 1603.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.985;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=5.354;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.71;ReadPosRankSum=1.561;SOR=1.179 GT:AD:DP:GQ:PL 0/1:74,63:137:99:1632,0,2076 chr1 230767926 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 230769165 . C T 2345.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.239;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=2.772;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.56;ReadPosRankSum=0.319;SOR=0.944 GT:AD:DP:GQ:PL 0/1:87,86:173:99:2374,0,2383 chr1 230774856 . C T 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=2.345;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,137 chr1 230778866 . A G 1371.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.132;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=0.758;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.43;ReadPosRankSum=-0.459;SOR=0.781 GT:AD:DP:GQ:PL 0/1:67,53:120:99:1400,0,1885 chr1 230778960 . C A 3548.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.423;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=1.161;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.72;ReadPosRankSum=1.465;SOR=0.826 GT:AD:DP:GQ:PL 0/1:87,93:180:99:3577,0,4497 chr1 230778983 . A C 3542.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.791;ClippingRankSum=0.000;DP=172;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.60;ReadPosRankSum=-0.113;SOR=0.668 GT:AD:DP:GQ:PL 0/1:78,94:172:99:3571,0,4194 chr1 230780514 . C T 1403.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.871;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=15.085;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.24;ReadPosRankSum=-0.845;SOR=0.602 GT:AD:DP:GQ:PL 0/1:54,52:106:99:1432,0,1662 chr1 230786255 . G C 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=0.366;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr1 230787405 . T C 549.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.073;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.22;ReadPosRankSum=0.054;SOR=0.804 GT:AD:DP:GQ:PL 0/1:30,19:49:99:578,0,1003 chr1 230787441 . C G 724.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.165;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=1.043;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.29;ReadPosRankSum=1.380;SOR=0.932 GT:AD:DP:GQ:PL 0/1:51,27:78:99:753,0,1518 chr1 230787567 . C T 1854.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.712;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=1.252;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.67;ReadPosRankSum=0.377;SOR=0.555 GT:AD:DP:GQ:PL 0/1:85,74:159:99:1883,0,2324 chr1 230791607 . T A 761.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.38;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,19:19:57:790,57,0 chr1 230792125 . T C 1332.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.32;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1361,120,0 chr1 230792605 . C T 1599.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.302;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=3.009;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.38;ReadPosRankSum=0.846;SOR=0.411 GT:AD:DP:GQ:PL 0/1:51,53:104:99:1628,0,1574 chr1 230792766 . C G 1784.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.824;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=0.623;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.15;ReadPosRankSum=-0.567;SOR=0.604 GT:AD:DP:GQ:PL 0/1:87,73:160:99:1813,0,2333 chr1 230798152 . C T 2127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.298;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=1.228;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.16;ReadPosRankSum=0.727;SOR=0.842 GT:AD:DP:GQ:PL 0/1:89,86:175:99:2156,0,2288 chr1 230831374 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 230839708 . A G 636.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.30;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:665,48,0 chr1 230843911 . G A 717.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.421;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=2.362;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.71;ReadPosRankSum=0.454;SOR=1.131 GT:AD:DP:GQ:PL 0/1:41,26:67:99:746,0,1180 chr1 230858623 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 230868105 . G C 197.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.559;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=6.726;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.36;ReadPosRankSum=0.809;SOR=0.047 GT:AD:DP:GQ:PL 0/1:7,9:16:99:226,0,244 chr1 230868685 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.49;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 230879653 . T C 109.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:137,12,0 chr1 230906986 . T A 479.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.949;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.42;ReadPosRankSum=-1.004;SOR=0.648 GT:AD:DP:GQ:PL 0/1:18,24:42:99:508,0,456 chr1 230911646 . G A 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.414;SOR=1.270 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,151 chr1 230916437 . G T 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.79;ReadPosRankSum=-0.842;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:63:63,0,149 chr1 230921501 . A T 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.434;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=3.802;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=0.076;SOR=2.419 GT:AD:DP:GQ:PL 0/1:5,7:12:99:256,0,139 chr1 230924038 . C T 299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.74;ReadPosRankSum=1.356;SOR=0.941 GT:AD:DP:GQ:PL 0/1:7,9:16:99:328,0,244 chr1 230924990 . T C 1096.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.128;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=0.739;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.35;ReadPosRankSum=-1.051;SOR=0.798 GT:AD:DP:GQ:PL 0/1:62,44:106:99:1125,0,1714 chr1 230925311 . A G 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=1.282;SOR=0.039 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,147 chr1 230928800 . T C 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.54;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 230928865 . G A 429.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.936;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=2.222;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.86;ReadPosRankSum=-0.158;SOR=0.197 GT:AD:DP:GQ:PL 0/1:15,16:31:99:458,0,476 chr1 230931490 . C T 606.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.009;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.888;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.06;ReadPosRankSum=0.353;SOR=0.517 GT:AD:DP:GQ:PL 0/1:57,29:86:99:635,0,1604 chr1 230931572 . G T 438.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.144;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=1.351;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.45;ReadPosRankSum=1.301;SOR=0.454 GT:AD:DP:GQ:PL 0/1:25,17:42:99:467,0,918 chr1 230933906 . A C 123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.929;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=2.161;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.16;ReadPosRankSum=-0.626;SOR=0.250 GT:AD:DP:GQ:PL 0/1:17,7:24:99:152,0,536 chr1 230943635 . A G 598.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.30;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:627,45,0 chr1 230945558 . T G 396.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.054;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.88;ReadPosRankSum=1.552;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,14:19:99:425,0,118 chr1 230956434 . G A 1042.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.544;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=1.058;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.737;SOR=0.510 GT:AD:DP:GQ:PL 0/1:21,41:62:99:1071,0,487 chr1 230978719 . C G 155.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.751;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.31;ReadPosRankSum=-0.921;SOR=0.804 GT:AD:DP:GQ:PL 0/1:3,6:9:64:184,0,64 chr1 230978849 . C T 177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.501;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.78;ReadPosRankSum=1.061;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,8:10:54:206,0,54 chr1 230988309 . T C 443.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.183;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.38;ReadPosRankSum=-0.819;SOR=0.622 GT:AD:DP:GQ:PL 0/1:20,19:39:99:472,0,513 chr1 230989940 . A T 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.849;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.91;ReadPosRankSum=-0.190;SOR=0.269 GT:AD:DP:GQ:PL 0/1:9,5:14:99:167,0,299 chr1 230990426 . T G 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=1.465;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr1 231020283 . A G 573.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.973;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=3.129;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.51;ReadPosRankSum=0.464;SOR=0.184 GT:AD:DP:GQ:PL 0/1:19,18:37:99:602,0,680 chr1 231020327 . T A 281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.849;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=1.191;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,9:14:99:310,0,166 chr1 231021975 . T C 2043.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.125;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=4.463;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.44;ReadPosRankSum=0.181;SOR=1.253 GT:AD:DP:GQ:PL 0/1:47,53:100:99:2072,0,2638 chr1 231021983 . A C 1941.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.298;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.34;ReadPosRankSum=-0.892;SOR=0.703 GT:AD:DP:GQ:PL 0/1:41,50:91:99:1970,0,2560 chr1 231025342 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 231039898 . C G 279.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:27:308,27,0 chr1 231202040 . G A 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.31;MQRankSum=0.524;QD=8.15;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr1 231227254 . A G 605.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.804;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.82;ReadPosRankSum=-1.835;SOR=0.619 GT:AD:DP:GQ:PL 0/1:12,22:34:99:634,0,365 chr1 231241335 . C T 1406.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.103;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=1.968;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.27;ReadPosRankSum=-0.881;SOR=0.819 GT:AD:DP:GQ:PL 0/1:27,46:73:99:1435,0,760 chr1 231250866 . T A 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=1.150;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr1 231265159 . A G 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.91;ReadPosRankSum=0.558;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,5:13:99:170,0,295 chr1 231265850 . T C 1060.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.731;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=3.366;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.19;ReadPosRankSum=0.175;SOR=0.384 GT:AD:DP:GQ:PL 0/1:44,43:87:99:1089,0,1263 chr1 231266156 . G A 1725.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.931;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=3.149;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.07;ReadPosRankSum=1.668;SOR=1.004 GT:AD:DP:GQ:PL 0/1:62,70:132:99:1754,0,1586 chr1 231268084 . C T 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=0.842;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr1 231270549 . T C 268.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.949;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.92;ReadPosRankSum=1.181;SOR=0.346 GT:AD:DP:GQ:PL 0/1:6,9:15:99:297,0,205 chr1 231271215 . C T 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=2.128;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,133 chr1 231271396 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 231271413 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 231272345 . A G 1819.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.275;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=0.670;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.68;ReadPosRankSum=-0.884;SOR=0.800 GT:AD:DP:GQ:PL 0/1:57,67:124:99:1848,0,1541 chr1 231344761 . A G 322.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.758;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.37;ReadPosRankSum=0.707;SOR=1.022 GT:AD:DP:GQ:PL 0/1:7,14:21:99:351,0,127 chr1 231351162 . T C 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.75;ReadPosRankSum=-1.510;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:98:224,0,98 chr1 231351243 . A C 739.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.010;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=5.639;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.72;ReadPosRankSum=0.661;SOR=0.232 GT:AD:DP:GQ:PL 0/1:36,33:69:99:768,0,1073 chr1 231351271 . T C 1055.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.712;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=1.841;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.15;ReadPosRankSum=1.033;SOR=0.505 GT:AD:DP:GQ:PL 0/1:60,44:104:99:1084,0,1739 chr1 231352778 . C T 1675.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.322;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=4.974;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.27;ReadPosRankSum=0.649;SOR=1.153 GT:AD:DP:GQ:PL 0/1:45,58:103:99:1704,0,1268 chr1 231366499 . T A 208.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.247;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=3.473;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.73;ReadPosRankSum=-1.020;SOR=0.741 GT:AD:DP:GQ:PL 0/1:13,14:27:99:237,0,314 chr1 231366564 . T C 442.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.011;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=2.066;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.25;ReadPosRankSum=-0.596;SOR=1.739 GT:AD:DP:GQ:PL 0/1:6,17:23:99:471,0,147 chr1 231370811 . G A 535.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.112;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=2.287;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.61;ReadPosRankSum=1.384;SOR=1.609 GT:AD:DP:GQ:PL 0/1:9,17:26:99:564,0,229 chr1 231382795 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 231382919 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 231434059 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 231528457 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 231529007 . T A 1049.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.354;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.108;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.50;ReadPosRankSum=0.397;SOR=0.456 GT:AD:DP:GQ:PL 0/1:28,32:60:99:1078,0,856 chr1 231561284 . G A 351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.774;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.45;ReadPosRankSum=-0.638;SOR=0.793 GT:AD:DP:GQ:PL 0/1:4,11:15:99:380,0,122 chr1 231584885 . G A 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr1 231584913 . C A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 231591701 . A G 2677.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.409;ClippingRankSum=0.000;DP=173;ExcessHet=3.0103;FS=0.570;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.57;ReadPosRankSum=-1.341;SOR=0.643 GT:AD:DP:GQ:PL 0/1:72,100:172:99:2706,0,1673 chr1 231612243 . G A 237.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.006;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.21;ReadPosRankSum=-1.325;SOR=0.512 GT:AD:DP:GQ:PL 0/1:10,8:18:99:266,0,363 chr1 231621314 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 231627258 . A G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=0.000;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:68,0,33 chr1 231631484 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 231694549 . G A 4399.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.297;ClippingRankSum=0.000;DP=326;ExcessHet=3.0103;FS=3.594;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.54;ReadPosRankSum=0.459;SOR=0.524 GT:AD:DP:GQ:PL 0/1:160,165:325:99:4428,0,4220 chr1 231747250 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 231747251 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 231747265 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 231799953 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 231800270 . A G 1658.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.52;SOR=2.170 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1687,153,0 chr1 231800404 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 231818681 . C T 835.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.65;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:864,63,0 chr1 231819126 . C T 835.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.953;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=1.010;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.17;ReadPosRankSum=-0.774;SOR=0.923 GT:AD:DP:GQ:PL 0/1:30,29:59:99:864,0,837 chr1 231820160 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 231820340 . A T 1720.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.73;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1749,168,0 chr1 231866646 . A G 1120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.019;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.957;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=0.925;SOR=0.896 GT:AD:DP:GQ:PL 0/1:33,41:74:99:1149,0,880 chr1 231887455 . C T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 231899450 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 231913122 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 232365402 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 232368922 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 232368935 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 232368951 . T C 104.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:132,9,0 chr1 232375520 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 232386126 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 232399030 . C T 620.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.275;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=5.391;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-1.195;SOR=0.158 GT:AD:DP:GQ:PL 0/1:25,25:50:99:649,0,792 chr1 232399211 . T C 2704.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.509;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=5.966;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.73;ReadPosRankSum=0.429;SOR=0.626 GT:AD:DP:GQ:PL 0/1:91,106:197:99:2733,0,2434 chr1 232399284 . C T 5156.77 PASS AC=2;AF=1.00;AN=2;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.03;SOR=1.413 GT:AD:DP:GQ:PL 1/1:0,161:161:99:5185,483,0 chr1 232403883 . C T 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.35;ReadPosRankSum=-1.645;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:99:120,0,151 chr1 232403892 . C T 168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.11;ReadPosRankSum=-0.180;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:99:197,0,145 chr1 232415670 . G A 1127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.306;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=1.678;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.64;ReadPosRankSum=-1.151;SOR=0.960 GT:AD:DP:GQ:PL 0/1:73,44:117:99:1156,0,2004 chr1 232415754 . C T 709.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.812;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=2.504;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.68;ReadPosRankSum=0.079;SOR=1.765 GT:AD:DP:GQ:PL 0/1:16,22:38:99:738,0,486 chr1 232428416 . T C 813.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.760;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=2.271;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.72;ReadPosRankSum=0.754;SOR=0.431 GT:AD:DP:GQ:PL 0/1:34,30:64:99:842,0,1097 chr1 232432547 . A G 3247.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.90;SOR=3.109 GT:AD:DP:GQ:PL 1/1:0,88:88:99:3276,264,0 chr1 232439793 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.85;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 232441252 . T A 1804.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.335;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=1.377;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.17;ReadPosRankSum=-0.184;SOR=0.552 GT:AD:DP:GQ:PL 0/1:68,69:137:99:1833,0,1837 chr1 232443851 . T A 641.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.148;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.89;ReadPosRankSum=1.600;SOR=0.748 GT:AD:DP:GQ:PL 0/1:17,21:38:99:670,0,516 chr1 232445501 . C G 2343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.377;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.03;ReadPosRankSum=0.225;SOR=0.663 GT:AD:DP:GQ:PL 0/1:83,84:167:99:2372,0,2178 chr1 232460723 . C T 873.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.009;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=2.740;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.56;ReadPosRankSum=-0.744;SOR=1.355 GT:AD:DP:GQ:PL 0/1:30,30:60:99:902,0,902 chr1 232460982 . G A 2876.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.622;ClippingRankSum=0.000;DP=241;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.94;ReadPosRankSum=1.412;SOR=0.706 GT:AD:DP:GQ:PL 0/1:131,110:241:99:2905,0,3500 chr1 232461338 . A G 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=1.884;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,213 chr1 232461883 . C T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 232463804 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 232465462 . A G 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.049;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.87;ReadPosRankSum=0.538;SOR=0.693 GT:AD:DP:GQ:PL 0/1:7,10:17:99:298,0,224 chr1 232465545 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,120 chr1 232465609 . C G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 232471304 . T A 437.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.52;ReadPosRankSum=1.017;SOR=1.112 GT:AD:DP:GQ:PL 0/1:23,15:38:99:466,0,744 chr1 232471348 . T C 924.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.345;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=1.116;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=0.217;SOR=0.928 GT:AD:DP:GQ:PL 0/1:52,33:85:99:953,0,1597 chr1 232493729 . C T 338.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.191;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.13;ReadPosRankSum=0.346;SOR=0.509 GT:AD:DP:GQ:PL 0/1:9,12:21:99:367,0,279 chr1 232515004 . A G 11516.77 PASS AC=2;AF=1.00;AN=2;DP=358;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.35;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,356:356:99:11545,1068,0 chr1 232515121 . C T 4573.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.754;ClippingRankSum=0.000;DP=330;ExcessHet=3.0103;FS=3.581;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.86;ReadPosRankSum=-0.843;SOR=0.897 GT:AD:DP:GQ:PL 0/1:162,168:330:99:4602,0,4320 chr1 232548944 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 232548962 . A G 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 232597321 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 232605503 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 232792108 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 232805407 . C T 2547.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.20;SOR=1.131 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2576,207,0 chr1 232837821 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 232887448 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 232939170 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 232950710 . T C 881.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.658;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.846;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.50;ReadPosRankSum=-2.269;SOR=0.892 GT:AD:DP:GQ:PL 0/1:50,34:84:99:910,0,1283 chr1 232969696 . G A 668.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=3.912;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.90;ReadPosRankSum=0.061;SOR=2.348 GT:AD:DP:GQ:PL 0/1:13,19:32:99:697,0,447 chr1 232976205 . G A 250.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.755;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.67;ReadPosRankSum=0.639;SOR=0.275 GT:AD:DP:GQ:PL 0/1:7,9:16:99:279,0,233 chr1 232978081 . G T 1812.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.785;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=7.607;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.77;ReadPosRankSum=0.576;SOR=0.288 GT:AD:DP:GQ:PL 0/1:76,66:142:99:1841,0,2258 chr1 232984205 . C T 781.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.340;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.61;ReadPosRankSum=0.313;SOR=0.902 GT:AD:DP:GQ:PL 0/1:19,23:42:99:810,0,650 chr1 232986045 . G A 2008.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.804;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=0.687;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.74;ReadPosRankSum=-2.047;SOR=0.599 GT:AD:DP:GQ:PL 0/1:50,70:120:99:2037,0,1422 chr1 232986381 . C T 1771.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.933;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=2.348;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.89;ReadPosRankSum=0.511;SOR=0.936 GT:AD:DP:GQ:PL 0/1:58,61:119:99:1800,0,1607 chr1 232998340 . C T 1137.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.870;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=5.851;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.08;ReadPosRankSum=-0.313;SOR=1.379 GT:AD:DP:GQ:PL 0/1:47,40:87:99:1166,0,1346 chr1 232998647 . G A 267.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.31;ReadPosRankSum=0.114;SOR=1.445 GT:AD:DP:GQ:PL 0/1:4,8:12:99:296,0,131 chr1 233001393 . C T 198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.85;ReadPosRankSum=-0.619;SOR=1.863 GT:AD:DP:GQ:PL 0/1:2,6:8:59:227,0,59 chr1 233006120 . A T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 233008335 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 233014524 . T C 1060.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.71;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1089,84,0 chr1 233015471 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 233025026 . T C 2356.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.151;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.96;ReadPosRankSum=-2.468;SOR=0.678 GT:AD:DP:GQ:PL 0/1:107,90:197:99:2385,0,2946 chr1 233033939 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 233090102 . T C 1468.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.503;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.66;ReadPosRankSum=-1.502;SOR=0.743 GT:AD:DP:GQ:PL 0/1:68,58:126:99:1497,0,1697 chr1 233152108 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 233161145 . T C 3739.77 PASS AC=2;AF=1.00;AN=2;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.39;SOR=1.547 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3768,336,0 chr1 233161162 . T G 3891.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.13;SOR=1.311 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3920,374,0 chr1 233227184 . G A 949.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.483;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.79;ReadPosRankSum=0.480;SOR=0.722 GT:AD:DP:GQ:PL 0/1:49,39:88:99:978,0,1171 chr1 233259468 . T A 754.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.71;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,19:19:57:783,57,0 chr1 233295495 . G A 1492.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.107;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.36;ReadPosRankSum=-1.620;SOR=0.722 GT:AD:DP:GQ:PL 0/1:38,48:86:99:1521,0,1091 chr1 233318847 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 233328039 . G C 47.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:75,6,0 chr1 233353562 . A T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 233353753 . A G 668.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.375;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=3.020;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.27;ReadPosRankSum=-0.622;SOR=1.062 GT:AD:DP:GQ:PL 0/1:63,29:92:99:697,0,1673 chr1 233353783 . G A 981.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.025;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=6.586;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.93;ReadPosRankSum=0.026;SOR=1.402 GT:AD:DP:GQ:PL 0/1:73,37:110:99:1010,0,1935 chr1 233353961 . G T 1445.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.699;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.68;ReadPosRankSum=-0.088;SOR=0.663 GT:AD:DP:GQ:PL 0/1:60,54:114:99:1474,0,1641 chr1 233354797 . G A 922.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.290;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=4.373;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.65;ReadPosRankSum=-2.281;SOR=1.371 GT:AD:DP:GQ:PL 0/1:36,27:63:99:951,0,7070 chr1 233355018 . G T 649.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.911;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.85;ReadPosRankSum=0.758;SOR=0.527 GT:AD:DP:GQ:PL 0/1:19,22:41:99:678,0,612 chr1 233355030 . C T 534.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.398;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.21;ReadPosRankSum=0.691;SOR=0.275 GT:AD:DP:GQ:PL 0/1:15,18:33:99:563,0,495 chr1 233376616 . A G 1466.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.043;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=5.630;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.82;ReadPosRankSum=0.806;SOR=0.321 GT:AD:DP:GQ:PL 0/1:43,56:99:99:1495,0,1226 chr1 233379188 . G A 3009.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.161;ClippingRankSum=0.000;DP=246;ExcessHet=3.0103;FS=0.982;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.23;ReadPosRankSum=0.042;SOR=0.783 GT:AD:DP:GQ:PL 0/1:130,116:246:99:3038,0,3551 chr1 233379229 . G T 2794.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.170;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=0.480;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.99;ReadPosRankSum=0.053;SOR=0.738 GT:AD:DP:GQ:PL 0/1:129,104:233:99:2823,0,3713 chr1 233379325 . C T 2526.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.041;ClippingRankSum=0.000;DP=198;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=-1.568;SOR=0.729 GT:AD:DP:GQ:PL 0/1:110,88:198:99:2555,0,3350 chr1 233379356 . T G 2743.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.990;ClippingRankSum=0.000;DP=220;ExcessHet=3.0103;FS=3.043;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.47;ReadPosRankSum=0.766;SOR=0.934 GT:AD:DP:GQ:PL 0/1:122,98:220:99:2772,0,3324 chr1 233415801 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 233484842 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 233595635 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 233614109 . A G 354.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.55;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:383,30,0 chr1 233614738 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 233624118 . C T 1562.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.089;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=2.410;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.21;ReadPosRankSum=1.228;SOR=0.790 GT:AD:DP:GQ:PL 0/1:56,54:110:99:1591,0,1426 chr1 233624172 . T C 3470.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.03;SOR=0.905 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3499,306,0 chr1 233624193 . C T 1297.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.257;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=2.824;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.11;ReadPosRankSum=1.072;SOR=1.102 GT:AD:DP:GQ:PL 0/1:46,46:92:99:1326,0,1338 chr1 233624360 . A G 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.42;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr1 233631262 . T A 1816.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.910;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=1.325;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.98;ReadPosRankSum=0.799;SOR=0.582 GT:AD:DP:GQ:PL 0/1:69,71:140:99:1845,0,1878 chr1 233631277 . A G 1691.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.391;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.35;ReadPosRankSum=0.608;SOR=0.686 GT:AD:DP:GQ:PL 0/1:71,66:137:99:1720,0,1835 chr1 233631313 . T C 1466.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.544;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=3.344;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=-1.346;SOR=0.444 GT:AD:DP:GQ:PL 0/1:61,60:121:99:1495,0,1574 chr1 233631359 . A G 1076.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.29;ReadPosRankSum=-0.263;SOR=0.610 GT:AD:DP:GQ:PL 0/1:40,41:81:99:1105,0,1173 chr1 233638625 . C G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 233642749 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 233642756 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 233650040 . A C 3562.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.39;SOR=1.386 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3591,330,0 chr1 233687390 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.05;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 233687392 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.05;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 233687415 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.05;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 233687418 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.05;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 233733386 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 233746557 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 233769908 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 233815178 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 233836539 . T C 152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.97;ReadPosRankSum=-0.210;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:181,0,140 chr1 233904996 . A C 281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.260;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=1.632;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.62;ReadPosRankSum=0.194;SOR=1.219 GT:AD:DP:GQ:PL 0/1:25,12:37:99:310,0,751 chr1 233905152 . G A 876.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.577;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=3.460;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.28;ReadPosRankSum=0.986;SOR=0.345 GT:AD:DP:GQ:PL 0/1:29,37:66:99:905,0,760 chr1 233905383 . G C 941.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,24:24:72:970,72,0 chr1 233905385 . G C 312.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.663;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=4.853;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.03;ReadPosRankSum=1.799;SOR=2.147 GT:AD:DP:GQ:PL 0/1:13,11:24:99:341,0,391 chr1 233905571 . C T 3396.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.788;ClippingRankSum=0.000;DP=224;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.16;ReadPosRankSum=0.915;SOR=0.701 GT:AD:DP:GQ:PL 0/1:107,117:224:99:3425,0,2940 chr1 233905676 . G C 5369.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.588;ClippingRankSum=0.000;DP=374;ExcessHet=3.0103;FS=0.781;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.36;ReadPosRankSum=-0.614;SOR=0.635 GT:AD:DP:GQ:PL 0/1:172,202:374:99:5398,0,4544 chr1 233918822 . A C 143.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.210;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.96;ReadPosRankSum=-0.674;SOR=0.368 GT:AD:DP:GQ:PL 0/1:1,5:6:27:172,0,27 chr1 233918881 . T C 75.10 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:11:103,11,0 chr1 234220034 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 234231803 . T C 3902.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.694;ClippingRankSum=0.000;DP=273;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.30;ReadPosRankSum=-0.406;SOR=0.711 GT:AD:DP:GQ:PL 0/1:134,139:273:99:3931,0,3623 chr1 234286813 . G A 104.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:132,9,0 chr1 234286836 . G A 149.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.17;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:177,12,0 chr1 234286837 . T C 149.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.22;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:177,12,0 chr1 234292781 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 234306630 . G A 760.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.060;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.83;ReadPosRankSum=-1.968;SOR=0.752 GT:AD:DP:GQ:PL 0/1:24,31:55:99:789,0,567 chr1 234318659 . A C 1003.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.61;SOR=2.910 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1032,87,0 chr1 234320215 . C T 608.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.456;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.61;ReadPosRankSum=-0.261;SOR=0.824 GT:AD:DP:GQ:PL 0/1:16,23:39:99:637,0,383 chr1 234373390 . C T 540.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.663;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.63;ReadPosRankSum=0.230;SOR=1.179 GT:AD:DP:GQ:PL 0/1:7,18:25:99:569,0,159 chr1 234373513 . G C 3266.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.33;SOR=1.361 GT:AD:DP:GQ:PL 1/1:0,98:98:99:3295,294,0 chr1 234374119 . T G 425.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.385;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=3.802;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=24.83;ReadPosRankSum=-1.304;SOR=1.033 GT:AD:DP:GQ:PL 1/1:1,11:12:31:454,31,0 chr1 234374516 . A G 1684.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.40;SOR=1.747 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1713,156,0 chr1 234383639 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.48;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 234391829 . C T 938.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.77;SOR=2.753 GT:AD:DP:GQ:PL 1/1:0,27:27:80:967,80,0 chr1 234392246 . A G 283.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.28;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:312,21,0 chr1 234392260 . A G 325.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.57;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:354,24,0 chr1 234392627 . C T 261.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.01;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:290,21,0 chr1 234393806 . C T 5073.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.04;SOR=1.336 GT:AD:DP:GQ:PL 1/1:0,121:121:99:5102,367,0 chr1 234393824 . G A 4501.77 PASS AC=2;AF=1.00;AN=2;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.97;SOR=2.016 GT:AD:DP:GQ:PL 1/1:0,101:101:99:4530,310,0 chr1 234410499 . C T 104.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.132;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.48;ReadPosRankSum=0.771;SOR=0.631 GT:AD:DP:GQ:PL 0/1:9,5:14:99:133,0,266 chr1 234420616 . T C 734.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.235;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=1.868;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=-0.505;SOR=1.296 GT:AD:DP:GQ:PL 0/1:20,23:43:99:763,0,633 chr1 234420884 . C T 736.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.332;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=3.288;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.17;ReadPosRankSum=-0.746;SOR=0.261 GT:AD:DP:GQ:PL 0/1:25,27:52:99:765,0,774 chr1 234420900 . T A 585.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.915;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=1.778;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.62;ReadPosRankSum=-0.777;SOR=0.379 GT:AD:DP:GQ:PL 0/1:22,21:43:99:614,0,710 chr1 234432030 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 234437611 . G C 993.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.359;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.43;ReadPosRankSum=0.453;SOR=0.892 GT:AD:DP:GQ:PL 0/1:24,33:57:99:1022,0,710 chr1 234446711 . C T 310.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.476;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.13;ReadPosRankSum=-1.136;SOR=0.663 GT:AD:DP:GQ:PL 0/1:13,9:22:99:339,0,528 chr1 234446715 . G A 369.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.248;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.41;ReadPosRankSum=-1.624;SOR=0.512 GT:AD:DP:GQ:PL 0/1:13,11:24:99:398,0,522 chr1 234446905 . T C 1674.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.826;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=0.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.62;ReadPosRankSum=0.772;SOR=0.797 GT:AD:DP:GQ:PL 0/1:55,68:123:99:1703,0,1383 chr1 234447151 . C G 48.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:76,6,0 chr1 234448485 . C T 1623.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.420;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=9.460;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=0.608;SOR=0.272 GT:AD:DP:GQ:PL 0/1:69,65:134:99:1652,0,1927 chr1 234448699 . C T 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.785;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.67;ReadPosRankSum=0.864;SOR=0.105 GT:AD:DP:GQ:PL 0/1:17,5:22:99:131,0,607 chr1 234450160 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 234453917 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 234453924 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 234457577 . A T 487.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.21;ReadPosRankSum=-0.037;SOR=1.179 GT:AD:DP:GQ:PL 0/1:9,14:23:99:516,0,302 chr1 234459201 . T C 1420.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.669;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.856;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.28;ReadPosRankSum=-1.619;SOR=0.538 GT:AD:DP:GQ:PL 0/1:37,56:93:99:1449,0,970 chr1 234465479 . C T 329.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.673;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.906;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.19;ReadPosRankSum=-0.592;SOR=1.473 GT:AD:DP:GQ:PL 0/1:13,12:25:99:358,0,366 chr1 234465783 . T C 385.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.258;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.083;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.28;ReadPosRankSum=-0.533;SOR=0.920 GT:AD:DP:GQ:PL 0/1:31,22:53:99:414,0,868 chr1 234467329 . G T 239.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.90;ReadPosRankSum=0.790;SOR=0.307 GT:AD:DP:GQ:PL 0/1:14,8:22:99:268,0,518 chr1 234467459 . C T 1191.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.617;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=4.034;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.39;ReadPosRankSum=1.098;SOR=1.170 GT:AD:DP:GQ:PL 0/1:45,44:89:99:1220,0,1206 chr1 234467576 . A T 919.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.101;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=7.384;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.08;ReadPosRankSum=-0.981;SOR=1.483 GT:AD:DP:GQ:PL 0/1:47,36:83:99:948,0,1302 chr1 234467766 . G A 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.054;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.68;ReadPosRankSum=-0.984;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,3:10:99:105,0,454 chr1 234470898 . A G 454.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.614;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=5.798;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.94;ReadPosRankSum=-1.930;SOR=0.093 GT:AD:DP:GQ:PL 0/1:7,12:19:99:483,0,494 chr1 234470907 . C T 505.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.103;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.07;ReadPosRankSum=0.131;SOR=0.430 GT:AD:DP:GQ:PL 0/1:10,14:24:99:534,0,570 chr1 234471252 . A G 318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.358;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.94;ReadPosRankSum=0.853;SOR=0.666 GT:AD:DP:GQ:PL 0/1:7,13:20:99:347,0,166 chr1 234472580 . C A 128.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.46;ReadPosRankSum=0.431;SOR=0.941 GT:AD:DP:GQ:PL 0/1:1,5:6:24:157,0,24 chr1 234478644 . G C 316.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.004;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=6.107;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.60;ReadPosRankSum=-0.533;SOR=0.064 GT:AD:DP:GQ:PL 0/1:6,12:18:99:345,0,196 chr1 234485484 . C A 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.000;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr1 234546348 . A G 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 234546370 . A T 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 234555164 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 234559777 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 234571644 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 234600354 . A C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 234608504 . G A 1739.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.545;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=2.578;SOR=0.671 GT:AD:DP:GQ:PL 0/1:58,70:128:99:1768,0,1440 chr1 234608667 . C A 1402.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.28;SOR=2.191 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1431,120,0 chr1 234609263 . A G 1790.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.59;SOR=2.970 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1819,153,0 chr1 234776645 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.85;ReadPosRankSum=0.674;SOR=0.223 GT:AD:DP:GQ:PL 0/1:4,4:8:75:75,0,109 chr1 234776698 . G A 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=0.000;SOR=0.916 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,112 chr1 234777187 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 234777764 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 234777948 . T C 176.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.23;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:205,15,0 chr1 234777968 . T G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 234778227 . G A 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.44;ReadPosRankSum=0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:74,0,30 chr1 234778831 . C A 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.981;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=-0.366;SOR=1.981 GT:AD:DP:GQ:PL 0/1:2,5:7:28:188,0,28 chr1 234779069 . G A 134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.732;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.97;ReadPosRankSum=-0.549;SOR=0.941 GT:AD:DP:GQ:PL 0/1:2,7:9:57:163,0,57 chr1 234780640 . T C 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=-0.566;SOR=1.022 GT:AD:DP:GQ:PL 0/1:3,4:7:70:112,0,70 chr1 234780909 . G A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 234782698 . A T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 234785756 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.35;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 234809774 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 234818087 . A C 133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.351;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.10;MQRankSum=-3.819;QD=5.14;ReadPosRankSum=0.122;SOR=1.085 GT:AD:DP:GQ:PL 0/1:20,6:26:99:162,0,575 chr1 234820577 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 234820595 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 234829265 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 234895918 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 234918610 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 234920172 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 234927587 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 234942974 . G T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 234943167 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 235003810 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 235093306 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 235095276 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 235122425 . C T 107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.944;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=4.868;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.99;ReadPosRankSum=1.533;SOR=0.132 GT:AD:DP:GQ:PL 0/1:11,7:18:99:136,0,337 chr1 235127607 . C A 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=1.645;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:61:110,0,61 chr1 235172502 . C T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 235172955 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 235175062 . G A 62.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.71;ReadPosRankSum=-0.076;SOR=0.180 GT:AD:DP:GQ:PL 0/1:8,3:11:91:91,0,301 chr1 235194228 . A G 940.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.360;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=1.262;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.25;ReadPosRankSum=-0.468;SOR=0.467 GT:AD:DP:GQ:PL 0/1:34,32:66:99:969,0,1008 chr1 235194383 . A T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 235219873 . A G 434.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.309;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=2.401;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.76;ReadPosRankSum=0.923;SOR=0.399 GT:AD:DP:GQ:PL 0/1:36,20:56:99:463,0,994 chr1 235220036 . T C 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.19;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:65:65,0,71 chr1 235221523 . G A 270.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.139;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.93;ReadPosRankSum=0.459;SOR=1.179 GT:AD:DP:GQ:PL 0/1:7,10:17:99:299,0,144 chr1 235224539 . T A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:29:75,0,29 chr1 235228768 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 235229231 . T C 271.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.599;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.41;ReadPosRankSum=0.366;SOR=1.445 GT:AD:DP:GQ:PL 0/1:5,9:14:99:300,0,129 chr1 235230963 . G T 281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.65;ReadPosRankSum=3.712;SOR=0.693 GT:AD:DP:GQ:PL 0/1:9,9:18:99:310,0,316 chr1 235231226 . A C 569.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.470;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.63;ReadPosRankSum=0.817;SOR=0.576 GT:AD:DP:GQ:PL 0/1:23,26:49:99:607,0,630 chr1 235349116 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 235351140 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 235362921 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 235368136 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 235368142 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 235369202 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 235369208 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 235430867 . A G 763.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.943;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.25;ReadPosRankSum=1.957;SOR=0.709 GT:AD:DP:GQ:PL 0/1:17,30:47:99:792,0,433 chr1 235430935 . A G 379.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.34;ReadPosRankSum=-0.235;SOR=1.371 GT:AD:DP:GQ:PL 0/1:6,11:17:99:408,0,199 chr1 235433937 . T G 899.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.123;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=2.422;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.23;ReadPosRankSum=0.302;SOR=1.064 GT:AD:DP:GQ:PL 0/1:36,32:68:99:928,0,1050 chr1 235435658 . C T 357.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.110;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.18;ReadPosRankSum=0.400;SOR=0.636 GT:AD:DP:GQ:PL 0/1:18,14:32:99:386,0,519 chr1 235436814 . T C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr1 235438643 . G T 543.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.407;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=1.856;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.54;ReadPosRankSum=-0.043;SOR=1.338 GT:AD:DP:GQ:PL 0/1:38,19:57:99:572,0,1186 chr1 235448210 . A C 367.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.327;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=6.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.51;ReadPosRankSum=1.166;SOR=2.833 GT:AD:DP:GQ:PL 0/1:10,11:21:99:396,0,286 chr1 235449005 . C T 803.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.169;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.27;ReadPosRankSum=1.291;SOR=1.022 GT:AD:DP:GQ:PL 0/1:19,25:44:99:832,0,589 chr1 235464520 . T C 46.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:21:75,0,21 chr1 235479784 . A G 163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.619;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.47;ReadPosRankSum=0.854;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,6:8:59:192,0,59 chr1 235496168 . G A 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=1.645;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 235496239 . A T 106.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.010;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.90;ReadPosRankSum=-2.287;SOR=0.086 GT:AD:DP:GQ:PL 0/1:4,8:12:99:135,0,115 chr1 235504442 . G T 326.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.453;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=-0.132;SOR=1.609 GT:AD:DP:GQ:PL 0/1:11,10:21:99:355,0,356 chr1 235551269 . T C 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:71:123,0,71 chr1 235551271 . T C 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:71:123,0,71 chr1 235552223 . A G 6311.77 PASS AC=2;AF=1.00;AN=2;DP=195;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.37;SOR=1.526 GT:AD:DP:GQ:PL 1/1:0,195:195:99:6340,585,0 chr1 235552256 . C G 4767.77 PASS AC=2;AF=1.00;AN=2;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.11;SOR=2.023 GT:AD:DP:GQ:PL 1/1:0,144:144:99:4796,432,0 chr1 235552301 . A G 2765.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.92;SOR=3.973 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2794,217,0 chr1 235552317 . A C 2185.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.56;SOR=4.693 GT:AD:DP:GQ:PL 1/1:0,55:55:99:2214,165,0 chr1 235552361 . A G 864.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.30;SOR=4.003 GT:AD:DP:GQ:PL 1/1:0,23:23:69:893,69,0 chr1 235556076 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 235577683 . C A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 235583705 . C T 1445.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.77;SOR=2.726 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1474,123,0 chr1 235583854 . A G 2798.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.45;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2827,266,0 chr1 235587863 . T A 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 235593521 . G T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 235593622 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 235615837 . C T 237.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:266,24,0 chr1 235643279 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 235650285 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 235664143 . T C 213.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.36;ReadPosRankSum=0.170;SOR=0.495 GT:AD:DP:GQ:PL 0/1:9,7:16:99:242,0,328 chr1 235664341 . C T 585.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.31;ReadPosRankSum=0.860;SOR=0.818 GT:AD:DP:GQ:PL 0/1:15,17:32:99:614,0,530 chr1 235693601 . G A 940.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.656;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=5.909;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.93;ReadPosRankSum=-1.114;SOR=0.174 GT:AD:DP:GQ:PL 0/1:32,31:63:99:969,0,1035 chr1 235697040 . C T 1367.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.934;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=0.332;SOR=0.629 GT:AD:DP:GQ:PL 0/1:52,50:102:99:1396,0,1276 chr1 235709365 . T C 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,187 chr1 235723976 . G T 309.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.645;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.36;ReadPosRankSum=-1.122;SOR=1.244 GT:AD:DP:GQ:PL 0/1:6,10:16:99:338,0,203 chr1 235733426 . C T 321.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.564;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.87;ReadPosRankSum=0.365;SOR=0.804 GT:AD:DP:GQ:PL 0/1:14,11:25:99:350,0,395 chr1 235747092 . A G 1667.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.310;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=4.109;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.73;ReadPosRankSum=1.715;SOR=0.381 GT:AD:DP:GQ:PL 0/1:48,58:106:99:1696,0,1361 chr1 235747242 . C T 2015.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.555;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=1.792;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.34;ReadPosRankSum=-0.066;SOR=0.848 GT:AD:DP:GQ:PL 0/1:113,82:195:99:2044,0,2964 chr1 235777150 . C T 2077.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.117;ClippingRankSum=0.000;DP=164;ExcessHet=3.0103;FS=5.710;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.67;ReadPosRankSum=1.066;SOR=1.105 GT:AD:DP:GQ:PL 0/1:87,77:164:99:2106,0,2413 chr1 235781886 . G A 897.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.298;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=2.318;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.64;ReadPosRankSum=0.330;SOR=1.129 GT:AD:DP:GQ:PL 0/1:38,33:71:99:926,0,998 chr1 235781994 . T C 1734.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.159;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=0.662;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=0.211;SOR=0.621 GT:AD:DP:GQ:PL 0/1:59,65:124:99:1763,0,1581 chr1 235808463 . A G 749.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.564;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=6.555;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.70;ReadPosRankSum=-2.129;SOR=0.186 GT:AD:DP:GQ:PL 0/1:20,31:51:99:778,0,572 chr1 235809135 . T C 2386.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.333;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=1.252;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.11;ReadPosRankSum=0.685;SOR=0.578 GT:AD:DP:GQ:PL 0/1:70,88:158:99:2415,0,1700 chr1 235809567 . T C 779.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.204;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=5.848;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.30;ReadPosRankSum=-0.678;SOR=1.394 GT:AD:DP:GQ:PL 0/1:63,31:94:99:808,0,1773 chr1 235813294 . C T 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr1 235871998 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 235884485 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 235897578 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 235900299 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 235900732 . T C 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr1 235939020 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 235939141 . G C 302.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.23;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:36:331,36,0 chr1 235939216 . A G 311.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.69;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:340,24,0 chr1 235939232 . A C 331.78 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.46;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:24:360,24,0 chr1 235939254 . C G 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.23;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr1 235939258 . T C 241.84 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.46;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:18:270,18,0 chr1 235940665 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 235979265 . T C 2575.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.23;SOR=2.964 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2604,216,0 chr1 235990712 . C T 1899.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=7.784 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1928,144,0 chr1 236012027 . C A 1682.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.850;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.45;ReadPosRankSum=0.382;SOR=0.667 GT:AD:DP:GQ:PL 0/1:95,66:161:99:1711,0,2555 chr1 236012039 . T C 1731.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.196;ClippingRankSum=0.000;DP=169;ExcessHet=3.0103;FS=1.954;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.37;ReadPosRankSum=0.168;SOR=0.545 GT:AD:DP:GQ:PL 0/1:99,68:167:99:1760,0,2487 chr1 236012285 . C T 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=0.712;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr1 236017280 . C G 1098.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.943;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=0.752;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.08;ReadPosRankSum=-0.771;SOR=0.569 GT:AD:DP:GQ:PL 0/1:61,48:109:99:1127,0,1635 chr1 236024065 . T C 2867.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.505;ClippingRankSum=0.000;DP=226;ExcessHet=3.0103;FS=1.688;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-1.404;SOR=0.568 GT:AD:DP:GQ:PL 0/1:111,115:226:99:2896,0,3094 chr1 236041761 . C T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.10;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 236041790 . C T 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.93;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr1 236041821 . T C 971.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.08;SOR=6.518 GT:AD:DP:GQ:PL 1/1:0,25:25:75:1000,75,0 chr1 236042404 . C T 210.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.87;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:239,18,0 chr1 236043445 . C A 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr1 236045388 . A G 1258.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.40;SOR=6.666 GT:AD:DP:GQ:PL 1/1:0,27:27:87:1287,87,0 chr1 236045389 . T A 1258.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.04;SOR=6.804 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1287,87,0 chr1 236045473 . C T 3638.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.49;SOR=1.877 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3667,335,0 chr1 236045724 . C G 2703.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.58;SOR=1.725 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2732,249,0 chr1 236045781 . G A 1386.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.77;SOR=5.728 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1415,105,0 chr1 236065352 . C A 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 236080512 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 236093650 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236124543 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236143235 . A C 408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.814;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.71;ReadPosRankSum=-1.008;SOR=0.776 GT:AD:DP:GQ:PL 0/1:5,13:18:99:437,0,146 chr1 236169228 . A G 134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.732;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.97;ReadPosRankSum=0.000;SOR=0.941 GT:AD:DP:GQ:PL 0/1:2,7:9:57:163,0,57 chr1 236175322 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236204927 . C T 119.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:147,12,0 chr1 236205408 . T C 616.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.46;SOR=2.419 GT:AD:DP:GQ:PL 1/1:0,19:19:57:645,57,0 chr1 236207960 . C T 731.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.132;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.76;ReadPosRankSum=1.086;SOR=0.267 GT:AD:DP:GQ:PL 0/1:18,21:39:99:760,0,622 chr1 236217311 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 236218525 . G C 526.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.72;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:57:555,57,0 chr1 236218597 . T A 321.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.18;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:30:350,30,0 chr1 236218617 . T A 279.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:308,27,0 chr1 236218687 . A G 103.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:131,9,0 chr1 236218689 . C A 103.28 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.00;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:9:131,9,0 chr1 236220589 . T A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 236220610 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 236220978 . G C 2113.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.03;SOR=2.035 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2142,197,0 chr1 236221102 . A G 377.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.28;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:406,30,0 chr1 236221816 . C T 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.69;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr1 236221865 . G C 845.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,25:25:75:874,75,0 chr1 236222060 . C T 1266.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.79;SOR=1.828 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1295,130,0 chr1 236222079 . A G 1150.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.88;SOR=2.368 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1179,105,0 chr1 236225046 . G A 1131.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.323;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=1.666;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.21;ReadPosRankSum=0.061;SOR=0.890 GT:AD:DP:GQ:PL 0/1:57,44:101:99:1160,0,1464 chr1 236230354 . A G 571.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.29;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,16:16:48:600,48,0 chr1 236241081 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr1 236241091 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr1 236242626 . G T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 236243293 . T C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:95:107,0,95 chr1 236249847 . T C 187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.244;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.88;ReadPosRankSum=-0.566;SOR=0.569 GT:AD:DP:GQ:PL 0/1:10,9:19:99:216,0,258 chr1 236249982 . G A 306.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.224;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=1.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.61;ReadPosRankSum=0.312;SOR=0.375 GT:AD:DP:GQ:PL 0/1:9,12:21:99:335,0,279 chr1 236250062 . C T 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.803;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.10;ReadPosRankSum=-0.414;SOR=0.105 GT:AD:DP:GQ:PL 0/1:3,5:8:99:117,0,101 chr1 236250084 . T C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.524;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr1 236252047 . T C 1194.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.698;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=1.791;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.28;ReadPosRankSum=-0.671;SOR=1.004 GT:AD:DP:GQ:PL 0/1:45,45:90:99:1223,0,1076 chr1 236252144 . G A 325.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.680;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=7.952;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.03;ReadPosRankSum=1.346;SOR=0.074 GT:AD:DP:GQ:PL 0/1:13,12:25:99:354,0,456 chr1 236253257 . A G 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=1.068;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr1 236253621 . C T 363.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.043;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.55;ReadPosRankSum=-0.222;SOR=0.616 GT:AD:DP:GQ:PL 0/1:13,12:25:99:392,0,493 chr1 236253623 . C T 366.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.045;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.28;ReadPosRankSum=0.654;SOR=0.693 GT:AD:DP:GQ:PL 0/1:12,12:24:99:395,0,468 chr1 236281673 . C T 412.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.684;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=2.826;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.97;ReadPosRankSum=0.414;SOR=0.324 GT:AD:DP:GQ:PL 0/1:27,19:46:99:441,0,860 chr1 236281912 . A G 636.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.47;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:665,48,0 chr1 236369486 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236379723 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236379897 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236389230 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236394112 . T G 228.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.69;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:257,21,0 chr1 236394471 . G A 6410.77 PASS AC=2;AF=1.00;AN=2;DP=202;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.74;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,202:202:99:6439,605,0 chr1 236394504 . G A 1839.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.104;ClippingRankSum=0.000;DP=193;ExcessHet=3.0103;FS=1.811;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.53;ReadPosRankSum=-1.351;SOR=0.855 GT:AD:DP:GQ:PL 0/1:114,79:193:99:1868,0,2997 chr1 236394628 . G A 1717.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.96;SOR=3.306 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1746,141,0 chr1 236395874 . T C 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-0.431;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr1 236409089 . G A 297.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.439;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=0.092;SOR=0.784 GT:AD:DP:GQ:PL 0/1:11,12:23:99:326,0,320 chr1 236409175 . A G 860.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.512;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=3.145;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.79;ReadPosRankSum=-0.745;SOR=1.105 GT:AD:DP:GQ:PL 0/1:35,38:73:99:889,0,898 chr1 236413072 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 236414461 . T C 128.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=0.825;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:94:157,0,94 chr1 236414462 . C T 240.73 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;QD=29.16;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:187,18,0 chr1 236414500 . G A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr1 236427031 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236427197 . C G 763.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.080;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=1.274;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.89;ReadPosRankSum=-0.466;SOR=0.481 GT:AD:DP:GQ:PL 0/1:28,27:55:99:792,0,822 chr1 236427263 . C T 962.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.588;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.24;ReadPosRankSum=0.642;SOR=0.639 GT:AD:DP:GQ:PL 0/1:51,43:94:99:991,0,1180 chr1 236427329 . C T 1192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.973;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.91;ReadPosRankSum=-0.706;SOR=0.787 GT:AD:DP:GQ:PL 0/1:36,44:80:99:1221,0,1015 chr1 236427359 . G C 901.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.558;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.52;ReadPosRankSum=2.386;SOR=0.693 GT:AD:DP:GQ:PL 0/1:36,36:72:99:930,0,985 chr1 236427516 . T G 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.690;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.93;ReadPosRankSum=0.537;SOR=0.859 GT:AD:DP:GQ:PL 0/1:22,8:30:99:176,0,585 chr1 236429072 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 236429082 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 236452219 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236473374 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 236473409 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 236473565 . T G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.45;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 236473566 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.38;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 236482046 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236482140 . C T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.44;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 236483191 . G A 31.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.493;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.18;ReadPosRankSum=-1.348;SOR=2.303 GT:AD:DP:GQ:PL 0/1:8,2:10:60:60,0,554 chr1 236483195 . C A 31.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.493;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.18;ReadPosRankSum=-0.842;SOR=2.303 GT:AD:DP:GQ:PL 0/1:8,2:10:60:60,0,554 chr1 236483230 . T C 59.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.015;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.64;ReadPosRankSum=-0.480;SOR=0.593 GT:AD:DP:GQ:PL 0/1:6,3:9:88:88,0,318 chr1 236483236 . C G 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.303;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.82;ReadPosRankSum=0.366;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:69:69,0,300 chr1 236483238 . T A 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.82;ReadPosRankSum=0.366;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:69:69,0,300 chr1 236483243 . T G 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.82;ReadPosRankSum=0.712;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:69:69,0,300 chr1 236483246 . G A 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.79;ReadPosRankSum=0.431;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:69:69,0,300 chr1 236483258 . A C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.29;ReadPosRankSum=0.842;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:72:72,0,283 chr1 236483266 . T G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.29;ReadPosRankSum=0.623;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:72:72,0,283 chr1 236483275 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.75;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:72:72,0,283 chr1 236483281 . T G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,241 chr1 236483284 . A C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,241 chr1 236483290 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,241 chr1 236483296 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.69;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:75:75,0,241 chr1 236483301 . T C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,199 chr1 236483308 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,199 chr1 236483313 . A G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,199 chr1 236483314 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,199 chr1 236484211 . T C 755.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.35;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,22:22:66:784,66,0 chr1 236484250 . C G 848.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.38;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:63:877,63,0 chr1 236484436 . C T 1142.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.89;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1171,111,0 chr1 236494361 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236495379 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 236495423 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 236495468 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 236495490 . G C 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr1 236500362 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236522449 . T A 69.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:97,12,0 chr1 236523845 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 236537805 . T A 377.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.88;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:406,30,0 chr1 236543277 . C T 289.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.38;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:318,24,0 chr1 236543371 . T A 1892.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.83;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1921,149,0 chr1 236543480 . C T 6138.77 PASS AC=2;AF=1.00;AN=2;DP=181;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.10;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,180:180:99:6167,540,0 chr1 236543562 . G C 9473.77 PASS AC=2;AF=1.00;AN=2;DP=296;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.11;SOR=0.727 GT:AD:DP:GQ:PL 1/1:0,295:295:99:9502,885,0 chr1 236547918 . A T 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr1 236551143 . G C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 236553386 . G A 1398.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.12;SOR=1.845 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1427,123,0 chr1 236553533 . T C 5502.77 PASS AC=2;AF=1.00;AN=2;DP=163;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=1.468 GT:AD:DP:GQ:PL 1/1:0,162:162:99:5531,487,0 chr1 236553802 . A T 1753.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.82;SOR=3.171 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1782,150,0 chr1 236554314 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236555835 . T C 4233.77 PASS AC=2;AF=1.00;AN=2;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.57;SOR=1.839 GT:AD:DP:GQ:PL 1/1:0,130:130:99:4262,389,0 chr1 236558360 . T C 2645.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.03;SOR=1.103 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2674,219,0 chr1 236558882 . A T 1399.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.55;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1428,129,0 chr1 236568898 . C A 520.03 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.663;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=21.67;ReadPosRankSum=-1.045;SOR=1.329 GT:AD:DP:GQ:PL 1/1:2,22:24:12:548,12,0 chr1 236570173 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236574588 . C T 2774.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.68;SOR=2.026 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2803,240,0 chr1 236576226 . T C 996.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.220;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=3.030;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.62;ReadPosRankSum=0.348;SOR=0.403 GT:AD:DP:GQ:PL 0/1:39,40:79:99:1025,0,1085 chr1 236576835 . T C 2773.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.17;SOR=1.080 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2802,266,0 chr1 236582167 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 236582570 . T G 84.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.150;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.21;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:18:113,0,18 chr1 236596664 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236603147 . T A 2432.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.88;SOR=1.547 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2461,222,0 chr1 236603772 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.16;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 236604030 . A G 4958.77 PASS AC=2;AF=1.00;AN=2;DP=158;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.38;SOR=0.771 GT:AD:DP:GQ:PL 1/1:0,158:158:99:4987,474,0 chr1 236618221 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236707991 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 236718107 . T C 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=0.095;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,211 chr1 236718810 . G A 3170.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=1.519 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3199,306,0 chr1 236719003 . T C 2509.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.46;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2538,225,0 chr1 236719861 . A G 361.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.106;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=3.757;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.04;ReadPosRankSum=0.266;SOR=2.303 GT:AD:DP:GQ:PL 0/1:8,11:19:99:390,0,243 chr1 236719940 . T C 1548.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.22;SOR=1.287 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1577,157,0 chr1 236720121 . C T 608.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.033;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=1.066;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.94;ReadPosRankSum=-2.423;SOR=0.523 GT:AD:DP:GQ:PL 0/1:28,23:51:99:637,0,812 chr1 236720264 . G A 353.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.08;ReadPosRankSum=-0.455;SOR=0.636 GT:AD:DP:GQ:PL 0/1:8,14:22:99:382,0,234 chr1 236725811 . G C 956.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.435;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=1.444;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.72;ReadPosRankSum=-1.130;SOR=0.406 GT:AD:DP:GQ:PL 0/1:23,31:54:99:985,0,698 chr1 236727481 . A G 953.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.164;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=1.321;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.03;ReadPosRankSum=-1.203;SOR=1.127 GT:AD:DP:GQ:PL 0/1:26,30:56:99:982,0,769 chr1 236731347 . G A 1364.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.858;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=2.598;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.64;ReadPosRankSum=1.004;SOR=0.469 GT:AD:DP:GQ:PL 0/1:53,55:108:99:1393,0,1400 chr1 236734333 . A G 1647.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.33;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1676,144,0 chr1 236735742 . G A 2218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.669;ClippingRankSum=0.000;DP=200;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.09;ReadPosRankSum=-0.831;SOR=0.704 GT:AD:DP:GQ:PL 0/1:109,91:200:99:2247,0,2988 chr1 236739294 . C G 3036.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.617;ClippingRankSum=0.000;DP=292;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.40;ReadPosRankSum=-1.038;SOR=0.705 GT:AD:DP:GQ:PL 0/1:167,125:292:99:3065,0,4263 chr1 236740491 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236747563 . T C 299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.776;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.74;ReadPosRankSum=-0.953;SOR=0.941 GT:AD:DP:GQ:PL 0/1:7,9:16:99:328,0,232 chr1 236747837 . A G 1092.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.186;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=1.390;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.81;ReadPosRankSum=-1.899;SOR=1.064 GT:AD:DP:GQ:PL 0/1:31,34:65:99:1121,0,997 chr1 236748919 . G T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 236748986 . G A 890.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.45;SOR=6.273 GT:AD:DP:GQ:PL 1/1:0,22:22:66:919,66,0 chr1 236749297 . A G 1486.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.403;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.16;ReadPosRankSum=-0.553;SOR=0.618 GT:AD:DP:GQ:PL 0/1:42,50:92:99:1515,0,1137 chr1 236751276 . C T 173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=0.374;SOR=0.340 GT:AD:DP:GQ:PL 0/1:10,6:16:99:202,0,369 chr1 236751310 . G C 266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.076;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.88;ReadPosRankSum=0.606;SOR=0.804 GT:AD:DP:GQ:PL 0/1:18,9:27:99:295,0,635 chr1 236754705 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236761206 . A G 5165.77 PASS AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.21;SOR=1.706 GT:AD:DP:GQ:PL 1/1:0,151:151:99:5194,453,0 chr1 236762544 . G A 3869.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.939;ClippingRankSum=0.000;DP=273;ExcessHet=3.0103;FS=3.294;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.17;ReadPosRankSum=-0.455;SOR=0.692 GT:AD:DP:GQ:PL 0/1:133,140:273:99:3898,0,3358 chr1 236762730 . A G 761.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.554;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.55;ReadPosRankSum=-0.144;SOR=1.483 GT:AD:DP:GQ:PL 0/1:26,23:49:99:790,0,884 chr1 236795232 . G T 3807.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.62;SOR=1.835 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3836,330,0 chr1 236795952 . G A 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr1 236809027 . G A 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.65;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr1 236810824 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 236816297 . A G 806.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.41;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:835,60,0 chr1 236820232 . A G 2663.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.28;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2692,181,0 chr1 236820234 . C G 2663.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.17;SOR=0.871 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2692,181,0 chr1 236820294 . A G 1960.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.40;SOR=0.877 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1989,171,0 chr1 236820577 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 236824490 . G T 1705.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.81;SOR=2.655 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1734,147,0 chr1 236826591 . C T 135.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:163,12,0 chr1 236838626 . A G 2102.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.92;SOR=2.157 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2131,186,0 chr1 236838732 . A C 437.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.62;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:466,36,0 chr1 236850253 . T A 961.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.36;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,22:22:66:990,66,0 chr1 236852328 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 236860033 . T C 626.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.99;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:655,48,0 chr1 236874528 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 236874553 . C A 138.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:166,12,0 chr1 236874708 . T A 1747.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.050;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=2.233;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.48;ReadPosRankSum=1.284;SOR=0.460 GT:AD:DP:GQ:PL 0/1:20,80:100:99:1776,0,211 chr1 236874921 . G C 3198.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.14;SOR=3.509 GT:AD:DP:GQ:PL 1/1:0,85:85:99:3227,256,0 chr1 236885262 . G A 1126.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.19;SOR=1.885 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1155,105,0 chr1 236886579 . C T 2719.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.00;SOR=2.026 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2748,240,0 chr1 236887570 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236889492 . T A 382.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.88;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:411,30,0 chr1 236891269 . A G 3184.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-1.138;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.92;ReadPosRankSum=-0.664;SOR=0.818 GT:AD:DP:GQ:PL 1/1:1,102:103:99:3213,267,0 chr1 236894308 . G A 8477.77 PASS AC=2;AF=1.00;AN=2;DP=248;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.18;SOR=2.322 GT:AD:DP:GQ:PL 1/1:0,248:248:99:8506,744,0 chr1 236895444 . C A 6461.77 PASS AC=2;AF=1.00;AN=2;DP=195;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.14;SOR=0.955 GT:AD:DP:GQ:PL 1/1:0,195:195:99:6490,585,0 chr1 236895528 . C T 6683.77 PASS AC=2;AF=1.00;AN=2;DP=210;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.83;SOR=1.043 GT:AD:DP:GQ:PL 1/1:0,210:210:99:6712,630,0 chr1 236897133 . G T 4479.77 PASS AC=2;AF=1.00;AN=2;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.00;SOR=1.527 GT:AD:DP:GQ:PL 1/1:0,140:140:99:4508,420,0 chr1 236897756 . A C 1589.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.85;SOR=3.365 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1618,126,0 chr1 236900035 . G C 1471.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1500,138,0 chr1 236900204 . A G 1308.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.44;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1337,114,0 chr1 236902026 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 236902283 . G T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 236955580 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236971595 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236971746 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 236981213 . T G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 237028272 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 237071861 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 237071885 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 237072288 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 237073667 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 237116120 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 237270224 . C T 288.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.517;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=8.947;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.02;ReadPosRankSum=1.305;SOR=2.439 GT:AD:DP:GQ:PL 0/1:25,11:36:99:317,0,663 chr1 237270325 . C T 502.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.048;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=2.487;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.86;ReadPosRankSum=0.164;SOR=0.352 GT:AD:DP:GQ:PL 0/1:31,20:51:99:531,0,835 chr1 237284254 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 237305580 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 237310070 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 237310076 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 237341349 . A T 107.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:135,12,0 chr1 237341408 . A G 418.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.74;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:447,33,0 chr1 237341459 . T C 1815.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.32;SOR=3.702 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1844,147,0 chr1 237352773 . T C 1933.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.34;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1962,173,0 chr1 237353155 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 237355837 . T A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.52;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 237355865 . G T 374.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.23;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,12:12:35:403,35,0 chr1 237367371 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:90,6,0 chr1 237367387 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 237377315 . A C 4483.77 PASS AC=2;AF=1.00;AN=2;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.80;SOR=1.147 GT:AD:DP:GQ:PL 1/1:0,141:141:99:4512,422,0 chr1 237388076 . T A 2138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.003;ClippingRankSum=0.000;DP=177;ExcessHet=3.0103;FS=5.379;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.08;ReadPosRankSum=-0.338;SOR=1.110 GT:AD:DP:GQ:PL 0/1:93,84:177:99:2167,0,2436 chr1 237397914 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 237406157 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 237417306 . G T 463.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.85;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:492,33,0 chr1 237417312 . G C 421.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.56;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:450,30,0 chr1 237454457 . C T 1566.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.72;SOR=1.094 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1595,153,0 chr1 237456749 . T C 3951.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.77;SOR=2.522 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3980,337,0 chr1 237469370 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 237506726 . A C 651.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.782;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.17;ReadPosRankSum=-0.358;SOR=0.892 GT:AD:DP:GQ:PL 0/1:12,22:34:99:680,0,297 chr1 237506840 . A G 774.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.466;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=2.966;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.11;ReadPosRankSum=1.740;SOR=1.088 GT:AD:DP:GQ:PL 0/1:51,34:85:99:803,0,1295 chr1 237508961 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.16;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 237530171 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.04;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 237530179 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.12;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 237530621 . A G 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.97;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 237548157 . A G 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr1 237548344 . T C 1054.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.13;SOR=2.621 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1083,90,0 chr1 237548497 . A G 3012.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.71;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3041,284,0 chr1 237550803 . G A 404.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.354;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.87;ReadPosRankSum=-0.807;SOR=0.646 GT:AD:DP:GQ:PL 0/1:24,17:41:99:433,0,641 chr1 237566218 . A T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 237566474 . G A 2017.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.34;SOR=5.709 GT:AD:DP:GQ:PL 1/1:0,53:53:99:2046,158,0 chr1 237566824 . A G 7146.77 PASS AC=2;AF=1.00;AN=2;DP=193;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.65;SOR=3.599 GT:AD:DP:GQ:PL 1/1:0,193:193:99:7175,580,0 chr1 237566869 . C T 3771.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=6.294 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3800,286,0 chr1 237569032 . C T 372.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.57;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:401,30,0 chr1 237569095 . G A 1435.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.03;SOR=4.351 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1464,111,0 chr1 237569373 . C T 1463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.771;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.40;ReadPosRankSum=-0.585;SOR=0.764 GT:AD:DP:GQ:PL 0/1:64,54:118:99:1492,0,1751 chr1 237582495 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 237590064 . A C 221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.198;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.84;ReadPosRankSum=0.193;SOR=1.828 GT:AD:DP:GQ:PL 0/1:7,7:14:99:250,0,210 chr1 237590090 . A G 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.97;ReadPosRankSum=0.842;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:105,0,114 chr1 237591040 . A G 222.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.020;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=3.256;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.91;ReadPosRankSum=-0.132;SOR=0.105 GT:AD:DP:GQ:PL 0/1:6,8:14:99:251,0,208 chr1 237591888 . C T 441.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.041;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=1.417;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.60;ReadPosRankSum=-2.255;SOR=0.336 GT:AD:DP:GQ:PL 0/1:29,17:46:99:470,0,903 chr1 237591903 . T C 362.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.015;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=3.780;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.44;ReadPosRankSum=-0.645;SOR=0.207 GT:AD:DP:GQ:PL 0/1:28,15:43:99:391,0,832 chr1 237592048 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 237593727 . G A 341.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.420;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.36;ReadPosRankSum=1.683;SOR=1.244 GT:AD:DP:GQ:PL 0/1:6,10:16:99:370,0,190 chr1 237601900 . G A 201.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=28.83;ReadPosRankSum=-0.566;SOR=2.584 GT:AD:DP:GQ:PL 0/1:1,6:7:21:230,0,21 chr1 237602170 . A T 555.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.132;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=6.182;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.89;ReadPosRankSum=-0.964;SOR=2.066 GT:AD:DP:GQ:PL 0/1:21,19:40:99:584,0,552 chr1 237609417 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 237625544 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.21;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 237625562 . T C 386.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.36;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:415,30,0 chr1 237626017 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 237631303 . A G 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.99;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr1 237633459 . G C 412.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.714;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=2.829;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.79;ReadPosRankSum=-0.185;SOR=0.323 GT:AD:DP:GQ:PL 0/1:37,16:53:99:441,0,1108 chr1 237633537 . G A 592.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.443;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.41;ReadPosRankSum=-2.151;SOR=0.677 GT:AD:DP:GQ:PL 0/1:55,25:80:99:621,0,1500 chr1 237633782 . T G 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=-0.882;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:173,0,248 chr1 237635150 . G A 236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.29;ReadPosRankSum=0.476;SOR=0.275 GT:AD:DP:GQ:PL 0/1:15,8:23:99:265,0,555 chr1 237638470 . T C 8314.77 PASS AC=2;AF=1.00;AN=2;DP=257;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.35;SOR=1.510 GT:AD:DP:GQ:PL 1/1:0,257:257:99:8343,772,0 chr1 237638876 . A C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 237639259 . T C 2198.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.33;SOR=1.352 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2227,204,0 chr1 237649826 . A G 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=1.668;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,137 chr1 237651483 . C T 387.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.144;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=2.559;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.91;ReadPosRankSum=-0.473;SOR=0.387 GT:AD:DP:GQ:PL 0/1:29,20:49:99:416,0,814 chr1 237654484 . A G 923.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.382;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.53;ReadPosRankSum=0.000;SOR=1.102 GT:AD:DP:GQ:PL 0/1:12,29:41:99:952,0,306 chr1 237655714 . C G 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.18;ReadPosRankSum=0.588;SOR=1.112 GT:AD:DP:GQ:PL 0/1:6,9:15:99:331,0,205 chr1 237660176 . A G 186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.35;ReadPosRankSum=0.180;SOR=1.863 GT:AD:DP:GQ:PL 0/1:2,6:8:59:215,0,59 chr1 237660659 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 237661032 . G A 1241.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.93;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1270,101,0 chr1 237667803 . C A 753.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.11;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,20:20:60:782,60,0 chr1 237678090 . A G 665.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.270;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.05;ReadPosRankSum=-1.087;SOR=0.749 GT:AD:DP:GQ:PL 0/1:25,26:51:99:694,0,674 chr1 237698864 . G C 123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.242;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=7.129;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.16;ReadPosRankSum=0.303;SOR=0.054 GT:AD:DP:GQ:PL 0/1:17,7:24:99:152,0,604 chr1 237699136 . T C 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.221;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=-1.732;SOR=0.160 GT:AD:DP:GQ:PL 0/1:5,5:10:99:145,0,179 chr1 237700139 . G A 537.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.020;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.43;ReadPosRankSum=-1.388;SOR=0.507 GT:AD:DP:GQ:PL 0/1:36,21:57:99:566,0,1081 chr1 237700418 . T G 3643.77 PASS AC=2;AF=1.00;AN=2;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.05;SOR=1.322 GT:AD:DP:GQ:PL 1/1:0,107:107:99:3672,321,0 chr1 237701903 . C T 1660.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.59;SOR=3.033 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1689,141,0 chr1 237706903 . C T 587.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.784;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.07;ReadPosRankSum=1.718;SOR=0.495 GT:AD:DP:GQ:PL 0/1:17,22:39:99:616,0,491 chr1 237709587 . T C 1152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.119;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=2.833;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=-0.470;SOR=1.085 GT:AD:DP:GQ:PL 0/1:42,46:88:99:1181,0,1045 chr1 237718470 . C T 1223.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.46;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1252,129,0 chr1 237722655 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 237723439 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 237727137 . C T 6184.77 PASS AC=2;AF=1.00;AN=2;DP=198;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.24;SOR=0.755 GT:AD:DP:GQ:PL 1/1:0,198:198:99:6213,594,0 chr1 237730374 . C T 1512.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.19;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1541,141,0 chr1 237732505 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 237755056 . C T 1009.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.661;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=3.246;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.02;ReadPosRankSum=-0.850;SOR=1.218 GT:AD:DP:GQ:PL 0/1:36,36:72:99:1038,0,876 chr1 237757539 . G T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:95:107,0,95 chr1 237759753 . C T 2655.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.18;SOR=1.775 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2684,261,0 chr1 237760744 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 237772280 . G C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 237778606 . C A 933.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.804;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=3.767;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=-0.722;SOR=1.347 GT:AD:DP:GQ:PL 0/1:37,33:70:99:962,0,1062 chr1 237778645 . G A 1066.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.109;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=4.129;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.78;ReadPosRankSum=2.694;SOR=1.175 GT:AD:DP:GQ:PL 0/1:58,41:99:99:1095,0,1667 chr1 237781514 . C T 701.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.531;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.938;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.48;ReadPosRankSum=-1.208;SOR=0.906 GT:AD:DP:GQ:PL 0/1:43,31:74:99:730,0,1153 chr1 237783664 . T C 1022.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.638;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.61;ReadPosRankSum=-1.281;SOR=0.512 GT:AD:DP:GQ:PL 0/1:30,40:70:99:1051,0,838 chr1 237783700 . C T 926.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.281;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.853;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.07;ReadPosRankSum=1.197;SOR=0.529 GT:AD:DP:GQ:PL 0/1:56,36:92:99:955,0,1608 chr1 237788151 . A G 247.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.199;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.18;ReadPosRankSum=0.092;SOR=0.818 GT:AD:DP:GQ:PL 0/1:16,11:27:99:276,0,451 chr1 237791245 . G C 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.11;ReadPosRankSum=1.068;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:50:176,0,50 chr1 237792378 . T C 157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.655;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=3.123;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.14;ReadPosRankSum=0.353;SOR=2.030 GT:AD:DP:GQ:PL 0/1:8,5:13:99:186,0,321 chr1 237792380 . T C 157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.655;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=3.123;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.14;ReadPosRankSum=0.353;SOR=2.030 GT:AD:DP:GQ:PL 0/1:8,5:13:99:186,0,321 chr1 237793846 . G A 523.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.953;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=4.301;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.06;ReadPosRankSum=-0.279;SOR=0.141 GT:AD:DP:GQ:PL 0/1:8,21:29:99:552,0,213 chr1 237793861 . A G 664.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.238;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=1.624;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.47;ReadPosRankSum=-0.631;SOR=0.307 GT:AD:DP:GQ:PL 0/1:10,26:36:99:693,0,241 chr1 237794009 . A C 648.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.050;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.52;ReadPosRankSum=0.160;SOR=0.620 GT:AD:DP:GQ:PL 0/1:22,26:48:99:677,0,502 chr1 237801634 . A G 299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.74;ReadPosRankSum=0.535;SOR=0.941 GT:AD:DP:GQ:PL 0/1:7,9:16:99:328,0,244 chr1 237801735 . C A 778.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.823;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.42;ReadPosRankSum=-0.778;SOR=0.650 GT:AD:DP:GQ:PL 0/1:32,22:54:99:807,0,1398 chr1 237801743 . A G 794.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.469;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.72;ReadPosRankSum=-0.643;SOR=0.784 GT:AD:DP:GQ:PL 0/1:32,22:54:99:823,0,1398 chr1 237801794 . G T 646.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.441;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=3.269;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.98;ReadPosRankSum=-0.058;SOR=0.529 GT:AD:DP:GQ:PL 0/1:45,27:72:99:675,0,1238 chr1 237801831 . G A 729.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.151;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=0.304;SOR=0.678 GT:AD:DP:GQ:PL 0/1:42,22:64:99:758,0,1726 chr1 237806338 . A G 330.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.750;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.02;ReadPosRankSum=0.020;SOR=0.713 GT:AD:DP:GQ:PL 0/1:19,14:33:99:359,0,593 chr1 237830424 . C T 402.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.51;ReadPosRankSum=-0.426;SOR=0.776 GT:AD:DP:GQ:PL 0/1:11,12:23:99:431,0,390 chr1 237882286 . G C 139.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.025;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=3.096;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.76;ReadPosRankSum=0.839;SOR=0.138 GT:AD:DP:GQ:PL 0/1:13,5:18:99:168,0,724 chr1 237882290 . C T 139.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.113;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=3.299;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.36;ReadPosRankSum=0.745;SOR=0.120 GT:AD:DP:GQ:PL 0/1:14,5:19:99:168,0,724 chr1 237882953 . T C 804.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.97;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:833,60,0 chr1 237885025 . A G 1561.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.534;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=2.926;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.16;ReadPosRankSum=1.211;SOR=0.403 GT:AD:DP:GQ:PL 0/1:36,50:86:99:1590,0,1037 chr1 237888633 . C T 691.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.30;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,19:19:57:720,57,0 chr1 237890224 . T C 1183.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.510;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.991;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.37;ReadPosRankSum=-1.024;SOR=0.544 GT:AD:DP:GQ:PL 0/1:39,38:77:99:1212,0,1293 chr1 238239480 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 238250424 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 238262056 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 238314808 . G A 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 238382600 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 238542009 . A G 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr1 238577464 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 238617697 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 238745924 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 238745931 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 238975377 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 239052886 . G A 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr1 239052938 . C T 286.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.00;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:315,21,0 chr1 239052939 . A G 286.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.33;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:315,21,0 chr1 239052964 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 239056460 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 239056462 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 239178207 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 239178230 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 239178287 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 239301889 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 239446170 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 239446177 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 239492572 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 239766134 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 239766143 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 239847874 . C T 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 239867099 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 239949378 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 239955084 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 239955647 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 239955725 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.97;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 239955735 . T A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.19;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 239955753 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 239955761 . A C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.69;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 239972602 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 239972633 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 239972951 . C G 115.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.54;ReadPosRankSum=1.068;SOR=1.981 GT:AD:DP:GQ:PL 0/1:2,5:7:63:144,0,63 chr1 239973210 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 239973295 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.68;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 239973298 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.05;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 240002696 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.39;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 240002699 . A T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.61;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 240004574 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 240040518 . G C 94.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.97;QD=31.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0 chr1 240040537 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.78;QD=35.13;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 240040561 . G A 149.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.67;QD=36.45;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:177,12,0 chr1 240063402 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 240091528 . T C 186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.207;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=-0.349;SOR=1.863 GT:AD:DP:GQ:PL 0/1:6,6:12:99:215,0,180 chr1 240091574 . T C 375.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.457;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.45;ReadPosRankSum=0.418;SOR=0.892 GT:AD:DP:GQ:PL 0/1:12,14:26:99:404,0,355 chr1 240136829 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 240142599 . C T 1265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.957;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.61;ReadPosRankSum=-0.270;SOR=0.616 GT:AD:DP:GQ:PL 0/1:40,53:93:99:1294,0,1020 chr1 240144089 . C G 1170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.380;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.46;ReadPosRankSum=0.988;SOR=0.695 GT:AD:DP:GQ:PL 0/1:46,41:87:99:1199,0,1408 chr1 240144592 . A G 1217.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.589;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=3.425;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.18;ReadPosRankSum=-0.407;SOR=0.732 GT:AD:DP:GQ:PL 0/1:25,42:67:99:1246,0,626 chr1 240144847 . T C 934.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.779;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=5.831;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.83;ReadPosRankSum=-0.177;SOR=1.016 GT:AD:DP:GQ:PL 0/1:42,37:79:99:963,0,1186 chr1 240144900 . T C 1177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.107;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=1.926;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.30;ReadPosRankSum=-1.287;SOR=0.434 GT:AD:DP:GQ:PL 0/1:36,41:77:99:1206,0,949 chr1 240145048 . C G 682.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.183;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=2.700;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.65;ReadPosRankSum=-0.545;SOR=0.982 GT:AD:DP:GQ:PL 0/1:17,24:41:99:711,0,417 chr1 240145066 . A G 678.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.878;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.43;ReadPosRankSum=-0.393;SOR=0.631 GT:AD:DP:GQ:PL 0/1:19,25:44:99:707,0,411 chr1 240145082 . C A 630.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.501;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=1.249;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.77;ReadPosRankSum=-1.898;SOR=0.970 GT:AD:DP:GQ:PL 0/1:16,24:40:99:659,0,344 chr1 240153140 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 240188328 . T C 1934.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.307;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.02;ReadPosRankSum=-1.124;SOR=0.693 GT:AD:DP:GQ:PL 0/1:83,78:161:99:1963,0,2166 chr1 240207329 . C G 1690.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.273;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.52;ReadPosRankSum=-1.955;SOR=0.688 GT:AD:DP:GQ:PL 0/1:70,65:135:99:1719,0,1900 chr1 240258083 . G A 90.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.951;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.67;ReadPosRankSum=0.949;SOR=1.051 GT:AD:DP:GQ:PL 0/1:12,4:16:99:119,0,412 chr1 240258137 . C T 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=-1.231;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,259 chr1 240285134 . G T 1693.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.781;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=11.822;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.07;ReadPosRankSum=-1.261;SOR=1.497 GT:AD:DP:GQ:PL 0/1:86,67:153:99:1722,0,2148 chr1 240329243 . G A 1821.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.74;SOR=1.567 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1850,162,0 chr1 240329434 . G A 2950.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.73;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2979,278,0 chr1 240329652 . G C 746.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.88;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,21:21:63:775,63,0 chr1 240333965 . A C 1297.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.65;SOR=1.075 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1326,123,0 chr1 240334298 . T C 197.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.99;ReadPosRankSum=0.342;SOR=0.223 GT:AD:DP:GQ:PL 0/1:15,7:22:99:226,0,559 chr1 240334357 . C T 178.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.69;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:207,15,0 chr1 240373271 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 240392735 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.11;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 240437969 . A G 478.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.688;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=3.565;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.15;ReadPosRankSum=-0.987;SOR=2.133 GT:AD:DP:GQ:PL 0/1:11,14:25:99:507,0,350 chr1 240438386 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 240438414 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 240445649 . A G 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr1 240451120 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 240451252 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 240472191 . G C 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.64;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr1 240474271 . A G 408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.920;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.141;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.71;ReadPosRankSum=-0.254;SOR=0.450 GT:AD:DP:GQ:PL 0/1:33,20:53:99:437,0,981 chr1 240479867 . A C 969.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.11;SOR=5.058 GT:AD:DP:GQ:PL 1/1:0,25:25:75:998,75,0 chr1 240479884 . C T 1265.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.11;SOR=3.026 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1294,108,0 chr1 240492030 . G A 99.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.352;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.67;ReadPosRankSum=-0.114;SOR=1.508 GT:AD:DP:GQ:PL 0/1:9,4:13:99:128,0,269 chr1 240492260 . C A 868.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.335;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=1.983;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.59;ReadPosRankSum=-0.559;SOR=0.968 GT:AD:DP:GQ:PL 0/1:30,39:69:99:897,0,742 chr1 240617570 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 240617714 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 240623566 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 240668937 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 240714204 . C T 41.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:69,6,0 chr1 240725350 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 240752079 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 240754225 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 240770934 . A G 119.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.637;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.31;ReadPosRankSum=0.040;SOR=0.941 GT:AD:DP:GQ:PL 0/1:4,5:9:94:148,0,94 chr1 240776091 . C T 1352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.130;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=0.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.18;ReadPosRankSum=0.721;SOR=0.781 GT:AD:DP:GQ:PL 0/1:67,54:121:99:1381,0,1784 chr1 240806597 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 240814664 . G T 613.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.27;SOR=2.712 GT:AD:DP:GQ:PL 1/1:0,17:17:51:642,51,0 chr1 240816503 . G A 861.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.74;SOR=6.273 GT:AD:DP:GQ:PL 1/1:0,22:22:66:890,66,0 chr1 240816570 . A T 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.03;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 240882312 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 240936822 . G T 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.91;ReadPosRankSum=-0.263;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,5:13:99:170,0,295 chr1 240983022 . A G 273.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.953;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=1.583;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.14;ReadPosRankSum=-1.368;SOR=1.019 GT:AD:DP:GQ:PL 0/1:17,10:27:99:302,0,459 chr1 241061934 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 241098487 . C T 466.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=29.17;ReadPosRankSum=0.789;SOR=2.584 GT:AD:DP:GQ:PL 0/1:3,13:16:77:495,0,77 chr1 241135005 . C G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 241142746 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 241168691 . C A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 241182279 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 241208184 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 241245729 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 241296162 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 241355798 . T A 4088.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.71;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,125:125:99:4117,375,0 chr1 241356017 . A G 335.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.51;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:364,27,0 chr1 241431322 . T C 125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.712;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.97;ReadPosRankSum=-0.712;SOR=0.527 GT:AD:DP:GQ:PL 0/1:2,5:7:62:154,0,62 chr1 241431436 . A G 148.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.78;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:177,15,0 chr1 241532492 . T C 549.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.060;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=1.297;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.95;ReadPosRankSum=-0.362;SOR=1.022 GT:AD:DP:GQ:PL 0/1:24,22:46:99:578,0,715 chr1 241532545 . C G 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.404;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=5.180;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.30;ReadPosRankSum=-0.321;SOR=0.092 GT:AD:DP:GQ:PL 0/1:9,10:19:99:224,0,284 chr1 241541426 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 241541448 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 241549467 . C T 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.48;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr1 241549939 . A T 63.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.11;ReadPosRankSum=0.328;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:92:92,0,146 chr1 241566314 . T G 293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.32;ReadPosRankSum=-0.362;SOR=0.693 GT:AD:DP:GQ:PL 0/1:9,9:18:99:322,0,322 chr1 241566853 . G T 241.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.432;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=2.350;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.72;ReadPosRankSum=0.236;SOR=1.802 GT:AD:DP:GQ:PL 0/1:10,9:19:99:270,0,258 chr1 241586760 . T C 703.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.376;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.55;ReadPosRankSum=1.510;SOR=0.765 GT:AD:DP:GQ:PL 0/1:11,25:36:99:732,0,215 chr1 241586983 . T A 98.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.51;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:126,12,0 chr1 241675395 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 241675446 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 241683716 . C T 261.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.902;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=2.755;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.862;SOR=1.877 GT:AD:DP:GQ:PL 0/1:19,9:28:99:290,0,606 chr1 241722960 . T C 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.84;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 241723128 . C G 1798.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.59;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1827,156,0 chr1 241725870 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 241726477 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 241732487 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 241738633 . A C 563.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.40;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:592,45,0 chr1 241744246 . A C 335.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.50;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:364,27,0 chr1 241744389 . A G 2047.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.50;SOR=1.467 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2076,189,0 chr1 241744515 . T C 2648.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.10;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2677,264,0 chr1 241748427 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 241749372 . A C 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.11;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr1 241749922 . G C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.63;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 241769265 . C G 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.98;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr1 241770574 . A G 2568.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.36;SOR=1.936 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2597,231,0 chr1 241779969 . C G 353.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.578;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=5.959;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.08;ReadPosRankSum=0.454;SOR=0.058 GT:AD:DP:GQ:PL 0/1:8,14:22:99:382,0,268 chr1 241783464 . A C 3290.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.99;SOR=2.546 GT:AD:DP:GQ:PL 1/1:0,91:91:99:3319,274,0 chr1 241787653 . A G 113.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.22;ReadPosRankSum=-1.100;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:142,0,135 chr1 241787805 . A C 1702.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.081;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=5.027;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.07;ReadPosRankSum=-2.265;SOR=0.349 GT:AD:DP:GQ:PL 0/1:47,66:113:99:1731,0,1284 chr1 241801257 . C T 5949.77 PASS AC=2;AF=1.00;AN=2;DP=182;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.69;SOR=1.198 GT:AD:DP:GQ:PL 1/1:0,182:182:99:5978,546,0 chr1 241852518 . A G 404.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.73;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,12:12:36:433,36,0 chr1 241853707 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 241855925 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 241855929 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 241855940 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 241855945 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 241855947 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 241857089 . T A 132.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:160,12,0 chr1 241857090 . C T 132.03 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.17;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:12:160,12,0 chr1 241857193 . C T 1412.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.20;SOR=4.351 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1441,111,0 chr1 241858828 . T C 638.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.71;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:667,48,0 chr1 241866849 . A G 4013.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.43;SOR=2.324 GT:AD:DP:GQ:PL 1/1:0,111:111:99:4042,333,0 chr1 241872371 . A G 253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.736;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=3.468;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-1.549;SOR=0.132 GT:AD:DP:GQ:PL 0/1:11,9:20:99:282,0,382 chr1 241872420 . G A 218.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.21;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:247,18,0 chr1 241875734 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 241875739 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 241878631 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 241879243 . A G 3106.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.800;ClippingRankSum=0.000;DP=230;ExcessHet=3.0103;FS=0.480;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.51;ReadPosRankSum=-0.652;SOR=0.649 GT:AD:DP:GQ:PL 0/1:108,122:230:99:3135,0,2810 chr1 241879388 . A G 2316.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.779;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=4.854;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=27.58;ReadPosRankSum=0.441;SOR=3.098 GT:AD:DP:GQ:PL 1/1:2,82:84:99:2345,186,0 chr1 241881973 . C T 3362.77 PASS AC=2;AF=1.00;AN=2;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.76;SOR=0.747 GT:AD:DP:GQ:PL 1/1:0,113:113:99:3391,339,0 chr1 241885162 . G A 221.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.63;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:250,18,0 chr1 241885372 . C T 1327.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.166;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=3.009;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.91;ReadPosRankSum=-0.864;SOR=0.661 GT:AD:DP:GQ:PL 0/1:92,57:149:99:1356,0,2285 chr1 241885643 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 241889319 . T G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.44;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:110,0,30 chr1 241889383 . C G 314.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.432;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.67;ReadPosRankSum=0.065;SOR=0.269 GT:AD:DP:GQ:PL 0/1:5,11:16:99:343,0,161 chr1 241889740 . A G 352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.867;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=3.078;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.57;ReadPosRankSum=1.559;SOR=2.030 GT:AD:DP:GQ:PL 0/1:15,11:26:99:381,0,480 chr1 241907512 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 241908422 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 241909663 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 241915324 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 241915964 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 241916070 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 241916196 . A G 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr1 241920504 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 241920519 . T C 103.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:131,9,0 chr1 241932800 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 241932855 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 241957612 . G A 429.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.659;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=3.003;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.64;ReadPosRankSum=1.059;SOR=1.888 GT:AD:DP:GQ:PL 0/1:20,14:34:99:458,0,658 chr1 241966944 . A G 96.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:124,9,0 chr1 241966964 . T G 96.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:124,9,0 chr1 241967049 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 241967051 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 241967053 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 241984468 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 241984481 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 241988108 . T G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr1 241988115 . T C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr1 241993235 . G A 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.14;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 241993427 . G A 1107.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.23;SOR=1.528 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1136,81,0 chr1 241993432 . C T 1041.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.80;SOR=1.931 GT:AD:DP:GQ:PL 1/1:0,22:22:75:1070,75,0 chr1 241998251 . G A 313.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:342,27,0 chr1 241998317 . C A 754.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.45;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,24:24:72:783,72,0 chr1 241998377 . G A 1504.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.02;SOR=1.814 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1533,141,0 chr1 242007949 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 242043628 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 242043641 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 242056886 . A G 517.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.52;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:45:546,45,0 chr1 242057757 . T G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr1 242059168 . T G 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=0.060;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr1 242059452 . A G 714.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.369;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.298;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.43;ReadPosRankSum=1.243;SOR=1.002 GT:AD:DP:GQ:PL 0/1:17,24:41:99:743,0,418 chr1 242059869 . G A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.115;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.15;ReadPosRankSum=-0.382;SOR=0.602 GT:AD:DP:GQ:PL 0/1:19,6:25:99:107,0,514 chr1 242060097 . A G 715.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.429;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=1.172;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.03;ReadPosRankSum=-1.129;SOR=0.426 GT:AD:DP:GQ:PL 0/1:21,30:51:99:744,0,554 chr1 242089869 . A T 1244.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.429;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.42;ReadPosRankSum=-0.219;SOR=0.623 GT:AD:DP:GQ:PL 0/1:62,47:109:99:1273,0,1647 chr1 242170177 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 242170178 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 242179247 . C T 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr1 242179582 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 242212477 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 242219899 . T G 1378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.470;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=0.891;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.09;ReadPosRankSum=-0.496;SOR=0.875 GT:AD:DP:GQ:PL 0/1:65,49:114:99:1407,0,1957 chr1 242220208 . T C 1692.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.142;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=11.706;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.82;ReadPosRankSum=-0.786;SOR=0.039 GT:AD:DP:GQ:PL 0/1:41,54:95:99:1721,0,1411 chr1 242250502 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.31;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 242265532 . T A 205.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.483;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.83;ReadPosRankSum=-0.312;SOR=0.569 GT:AD:DP:GQ:PL 0/1:4,9:13:94:234,0,94 chr1 242288072 . A G 46.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.52;QD=23.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:74,6,0 chr1 242302228 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 242316818 . C A 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 242316820 . G C 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 242345838 . G A 307.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.05;QD=34.20;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:336,27,0 chr1 242346287 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 242367435 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 242422267 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 242422281 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 242449118 . G A 252.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.949;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.85;ReadPosRankSum=-1.327;SOR=1.112 GT:AD:DP:GQ:PL 0/1:6,9:15:99:281,0,206 chr1 242510650 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 242510673 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 242524088 . G A 1406.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.042;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=4.118;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.97;ReadPosRankSum=-0.418;SOR=1.229 GT:AD:DP:GQ:PL 0/1:36,58:94:99:1435,0,884 chr1 242527080 . A C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 242722427 . T C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.79;ReadPosRankSum=-0.431;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,4:6:66:81,0,66 chr1 242782300 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 242782306 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 242890244 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.50;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 242894159 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 242965951 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.73;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 243001003 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 243051024 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=45.49;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 243199378 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:32:75,0,32 chr1 243221088 . T C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 243233743 . T A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 243233745 . T A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 243233747 . T A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.42;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 243256127 . T A 5070.77 PASS AC=2;AF=1.00;AN=2;DP=162;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.30;SOR=1.387 GT:AD:DP:GQ:PL 1/1:0,162:162:99:5099,486,0 chr1 243271256 . A T 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.56;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr1 243286579 . G A 1077.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.66;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1106,99,0 chr1 243295620 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 243301759 . G A 77 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.25;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:114,12,0 chr1 243307890 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.93;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 243318129 . A G 2619.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.82;SOR=1.528 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2648,254,0 chr1 243318254 . C G 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.88;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr1 243330182 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 243336442 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 243336456 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 243379839 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 243379849 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 243379851 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 243415810 . G A 2025.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.10;SOR=2.564 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2054,168,0 chr1 243474446 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 243487724 . T C 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr1 243545769 . G A 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.53;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 243613764 . G A 447.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.942;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.41;ReadPosRankSum=-2.582;SOR=0.804 GT:AD:DP:GQ:PL 0/1:22,21:43:99:476,0,454 chr1 243634497 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 243634515 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 243665004 . T A 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr1 243795804 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 243797914 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 243950135 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 243952489 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 244056736 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 244056739 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 244056759 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.38;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 244056780 . G T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.94;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 244056805 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.90;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 244056806 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.84;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 244056808 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.97;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 244056817 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 244056819 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.36;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 244056823 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 244056833 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 244056834 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 244056839 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 244056844 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 244056854 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 244057058 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 244057065 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 244057266 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.08;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 244057288 . T C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.05;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 244057293 . C T 185.84 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.31;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:18:214,18,0 chr1 244057297 . T A 185.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:214,18,0 chr1 244057328 . A T 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr1 244211214 . C T 62.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:90,9,0 chr1 244262944 . A C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 244292602 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 244301952 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 244313416 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 244313453 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 244314509 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 244314536 . A G 111.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:140,15,0 chr1 244321970 . A G 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr1 244322062 . A G 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr1 244322215 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 244322340 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 244350561 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 244350609 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 244358225 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 244364825 . T C 1240.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.26;SOR=1.206 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1269,123,0 chr1 244378783 . G A 255.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.99;ReadPosRankSum=-0.444;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,8:16:99:284,0,286 chr1 244380918 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 244395406 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 244409728 . C A 792.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.275;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.25;ReadPosRankSum=-1.261;SOR=0.716 GT:AD:DP:GQ:PL 0/1:18,34:52:99:821,0,459 chr1 244423893 . A G 142.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.367;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.187;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.52;ReadPosRankSum=1.087;SOR=1.371 GT:AD:DP:GQ:PL 0/1:9,6:15:99:171,0,263 chr1 244435513 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 244437850 . C T 2038.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.43;SOR=1.146 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2067,201,0 chr1 244449682 . T C 180.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.812;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=3.256;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.91;ReadPosRankSum=0.073;SOR=2.303 GT:AD:DP:GQ:PL 0/1:8,6:14:99:209,0,224 chr1 244535216 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 244535219 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 244538994 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 244548920 . G T 96.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:125,15,0 chr1 244548942 . C T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 244552109 . G C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 244552137 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 244560618 . C G 1171.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.64;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1200,93,0 chr1 244560790 . G A 3944.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.30;SOR=0.782 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3973,345,0 chr1 244568259 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 244572254 . G C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.29;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 244572556 . A G 3692.77 PASS AC=2;AF=1.00;AN=2;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,107:107:99:3721,321,0 chr1 244572955 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 244575290 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 244576214 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 244583749 . G C 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr1 244583848 . G A 2394.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.81;SOR=1.917 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2423,219,0 chr1 244583991 . C T 3099.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.80;SOR=1.819 GT:AD:DP:GQ:PL 1/1:0,70:70:99:3128,211,0 chr1 244583992 . G A 3099.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.30;SOR=1.819 GT:AD:DP:GQ:PL 1/1:0,70:70:99:3128,211,0 chr1 244584037 . G A 1033.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.68;SOR=3.334 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1062,87,0 chr1 244588236 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 244591659 . C A 730.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.48;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,19:19:57:759,57,0 chr1 244591773 . G A 699.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.857;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.93;ReadPosRankSum=-2.795;SOR=0.593 GT:AD:DP:GQ:PL 0/1:33,31:64:99:728,0,846 chr1 244595896 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 244595902 . T C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.12;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 244595903 . A G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr1 244610482 . T C 495.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.05;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,15:15:45:524,45,0 chr1 244646031 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 244646094 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 244646175 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 244657195 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 244657222 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 244789070 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr1 244793278 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.72;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 244793282 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.66;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 244863420 . A G 54.52 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 244864047 . C T 1710.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=130;ExcessHet=3.0103;FS=8.127;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.16;ReadPosRankSum=0.048;SOR=0.296 GT:AD:DP:GQ:PL 0/1:62,68:130:99:1739,0,1693 chr1 244868168 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 244868270 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 244970237 . A G 1669.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.79;SOR=1.067 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1698,143,0 chr1 245015869 . C T 730.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.349;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=1.234;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.40;ReadPosRankSum=-0.196;SOR=1.022 GT:AD:DP:GQ:PL 0/1:19,23:42:99:759,0,972 chr1 245015886 . G T 537.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.471;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=1.737;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.21;ReadPosRankSum=-0.087;SOR=1.292 GT:AD:DP:GQ:PL 0/1:13,15:28:99:566,0,853 chr1 245048191 . C G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr1 245059332 . C G 2427.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.68;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2456,210,0 chr1 245059537 . G T 3093.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.91;SOR=2.019 GT:AD:DP:GQ:PL 1/1:0,94:94:99:3122,282,0 chr1 245082076 . T C 1483.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.828;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=5.531;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.78;ReadPosRankSum=2.091;SOR=1.266 GT:AD:DP:GQ:PL 0/1:53,41:94:99:1512,0,2816 chr1 245082100 . C T 1341.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.478;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=2.016;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.36;ReadPosRankSum=-0.135;SOR=0.963 GT:AD:DP:GQ:PL 0/1:46,36:82:99:1370,0,2701 chr1 245083038 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 245102902 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 245121590 . A T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.25;ReadPosRankSum=0.566;SOR=0.086 GT:AD:DP:GQ:PL 0/1:4,3:7:72:72,0,146 chr1 245124290 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 245149829 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 245165052 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 245169600 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 245169660 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.77;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 245169662 . G C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.81;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 245182931 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 245199319 . C G 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr1 245261578 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 245261706 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 245286449 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 245316935 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 245418197 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 245439746 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 245439944 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 245465414 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.83;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 245474424 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 245474451 . G A 56.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=14.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:84,12,0 chr1 245478520 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 245478546 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 245478549 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 245478602 . C G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 245487408 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 245487446 . T C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr1 245539982 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 245540688 . G T 1715.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.651;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=1.238;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.79;ReadPosRankSum=-0.595;SOR=0.589 GT:AD:DP:GQ:PL 0/1:86,73:159:99:1744,0,2361 chr1 245565013 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr1 245602417 . C G 134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.98;ReadPosRankSum=0.332;SOR=0.050 GT:AD:DP:GQ:PL 0/1:10,5:15:99:163,0,372 chr1 245626937 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 245683017 . T C 74.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.48;ReadPosRankSum=0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,4:10:99:103,0,152 chr1 245686427 . G A 3334.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.765;ClippingRankSum=0.000;DP=243;ExcessHet=3.0103;FS=8.097;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.72;ReadPosRankSum=0.096;SOR=0.378 GT:AD:DP:GQ:PL 0/1:128,115:243:99:3363,0,3594 chr1 245687204 . G C 2372.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.462;ClippingRankSum=0.000;DP=174;ExcessHet=3.0103;FS=3.511;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.64;ReadPosRankSum=1.199;SOR=0.997 GT:AD:DP:GQ:PL 0/1:86,88:174:99:2401,0,2286 chr1 245687987 . G T 3303.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.702;ClippingRankSum=0.000;DP=242;ExcessHet=3.0103;FS=0.471;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.65;ReadPosRankSum=0.132;SOR=0.742 GT:AD:DP:GQ:PL 0/1:125,117:242:99:3332,0,3480 chr1 245688002 . A G 8619.77 PASS AC=2;AF=1.00;AN=2;DP=217;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.52;SOR=1.117 GT:AD:DP:GQ:PL 1/1:0,217:217:99:8648,661,0 chr1 245694823 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 245694829 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 245738243 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 245749538 . C T 1182.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.280;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.769;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=1.687;SOR=0.556 GT:AD:DP:GQ:PL 0/1:52,44:96:99:1211,0,1364 chr1 245838066 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 245838073 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 245839630 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 245839631 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 245839647 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 245858639 . T C 3352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.109;ClippingRankSum=0.000;DP=272;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.37;ReadPosRankSum=0.630;SOR=0.697 GT:AD:DP:GQ:PL 0/1:139,132:271:99:3381,0,3668 chr1 245858769 . C T 1021.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.695;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.93;ReadPosRankSum=-1.408;SOR=0.765 GT:AD:DP:GQ:PL 0/1:43,36:79:99:1050,0,1352 chr1 245858857 . G A 712.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.94;SOR=2.200 GT:AD:DP:GQ:PL 1/1:0,21:21:63:741,63,0 chr1 245858897 . T C 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=0.000;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,137 chr1 245863562 . T G 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.35;ReadPosRankSum=0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:75:120,0,75 chr1 245863579 . G A 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.35;ReadPosRankSum=1.645;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:75:120,0,75 chr1 245863645 . A G 520.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.577;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.83;ReadPosRankSum=-0.624;SOR=1.358 GT:AD:DP:GQ:PL 0/1:9,16:25:99:549,0,277 chr1 245863722 . A G 994.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.090;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.42;ReadPosRankSum=0.529;SOR=0.735 GT:AD:DP:GQ:PL 0/1:28,26:54:99:1023,0,1171 chr1 245863727 . A T 1007.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.939;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=2.290;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.52;ReadPosRankSum=-0.043;SOR=0.387 GT:AD:DP:GQ:PL 0/1:33,28:61:99:1036,0,1284 chr1 245863732 . G C 2366.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.74;SOR=1.536 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2395,186,0 chr1 245894804 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 245915659 . G A 1953.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.392;ClippingRankSum=0.000;DP=176;ExcessHet=3.0103;FS=6.606;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.10;ReadPosRankSum=-0.077;SOR=1.179 GT:AD:DP:GQ:PL 0/1:99,77:176:99:1982,0,3886 chr1 245915666 . G A 2315.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.530;ClippingRankSum=0.000;DP=169;ExcessHet=3.0103;FS=12.132;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.70;ReadPosRankSum=-0.045;SOR=0.267 GT:AD:DP:GQ:PL 0/1:74,95:169:99:2344,0,2829 chr1 245927813 . C G 932.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.75;SOR=6.358 GT:AD:DP:GQ:PL 1/1:0,23:23:69:961,69,0 chr1 245928155 . T C 1338.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.20;SOR=3.145 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1367,114,0 chr1 245928213 . C T 714.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.45;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:51:743,51,0 chr1 245928229 . T C 550.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.59;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:39:579,39,0 chr1 245930342 . T C 304.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.86;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:333,24,0 chr1 245947271 . A G 1464.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.17;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1493,141,0 chr1 245949526 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 246004963 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 246004970 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 246006419 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 246006447 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 246007538 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 246007558 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 246150976 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 246327136 . T C 4038.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.44;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,88:88:99:4067,274,0 chr1 246327140 . A G 4439.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.99;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,100:100:99:4468,307,0 chr1 246327150 . G A 1238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.509;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.06;ReadPosRankSum=-0.260;SOR=0.716 GT:AD:DP:GQ:PL 0/1:63,49:112:99:1267,0,1673 chr1 246335564 . A C 1250.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.093;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=8.890;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.67;ReadPosRankSum=0.070;SOR=0.100 GT:AD:DP:GQ:PL 0/1:29,38:67:99:1279,0,976 chr1 246344894 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 246344901 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 246354097 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 246354785 . G A 90.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:118,9,0 chr1 246392900 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 246503045 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 246506979 . G C 1879.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.93;SOR=1.501 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1908,119,0 chr1 246507031 . A G 3243.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.88;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,93:93:99:3272,279,0 chr1 246507179 . C G 5587.77 PASS AC=2;AF=1.00;AN=2;DP=180;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.22;SOR=0.926 GT:AD:DP:GQ:PL 1/1:0,179:179:99:5616,537,0 chr1 246508586 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr1 246510016 . T C 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr1 246510364 . A G 38.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.611;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.85;ReadPosRankSum=-0.887;SOR=0.818 GT:AD:DP:GQ:PL 0/1:5,3:8:67:67,0,185 chr1 246510532 . C G 93.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.446;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.869;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.25;ReadPosRankSum=-0.552;SOR=0.086 GT:AD:DP:GQ:PL 0/1:11,4:15:99:122,0,346 chr1 246510646 . G A 221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.583;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=3.452;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.21;ReadPosRankSum=0.771;SOR=0.260 GT:AD:DP:GQ:PL 0/1:15,12:27:99:250,0,409 chr1 246511021 . C T 146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.086;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.61;MQRankSum=0.000;QD=10.48;ReadPosRankSum=1.020;SOR=0.804 GT:AD:DP:GQ:PL 0/1:8,6:14:99:175,0,192 chr1 246513023 . T G 221.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:250,18,0 chr1 246513733 . T C 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr1 246513802 . A C 218.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.88;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:30:247,30,0 chr1 246528242 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 246528724 . C T 60.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:88,6,0 chr1 246528726 . T C 60.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:88,6,0 chr1 246528977 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 246529073 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 246531178 . G A 123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.691;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.216;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.25;ReadPosRankSum=-1.051;SOR=1.432 GT:AD:DP:GQ:PL 0/1:10,5:15:99:152,0,236 chr1 246531361 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 246541261 . C T 311.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.191;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=0.124;SOR=0.540 GT:AD:DP:GQ:PL 0/1:13,11:24:99:340,0,423 chr1 246541382 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 246541388 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 246544514 . T C 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.484;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,142 chr1 246544556 . A G 220.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.550;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.392;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=-0.601;SOR=1.828 GT:AD:DP:GQ:PL 0/1:9,8:17:99:249,0,223 chr1 246544995 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.43;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 246545056 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.81;MQRankSum=0.842;QD=8.79;ReadPosRankSum=0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:72:81,0,72 chr1 246548487 . T A 731.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-1.077;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=21.52;ReadPosRankSum=-1.138;SOR=0.976 GT:AD:DP:GQ:PL 1/1:2,32:34:46:760,46,0 chr1 246548731 . A G 1012.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.58;SOR=6.518 GT:AD:DP:GQ:PL 1/1:0,25:25:75:1041,75,0 chr1 246551426 . G A 236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.31;ReadPosRankSum=-1.085;SOR=2.093 GT:AD:DP:GQ:PL 0/1:2,7:9:56:265,0,56 chr1 246554505 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 246554516 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 246556872 . A G 253.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.90;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:282,21,0 chr1 246564256 . G T 730.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.29;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,19:19:57:759,57,0 chr1 246566688 . A G 38.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.85;ReadPosRankSum=0.000;SOR=0.818 GT:AD:DP:GQ:PL 0/1:5,3:8:67:67,0,151 chr1 246578468 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 246591822 . T C 4628.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.54;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,138:138:99:4657,414,0 chr1 246605541 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.87;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 246620832 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 246621811 . A C 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.84;ReadPosRankSum=0.138;SOR=0.976 GT:AD:DP:GQ:PL 0/1:6,8:14:99:292,0,196 chr1 246634408 . G T 307.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.767;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=2.993;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.38;ReadPosRankSum=-0.347;SOR=1.845 GT:AD:DP:GQ:PL 0/1:14,9:23:99:336,0,805 chr1 246634672 . T A 210.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.111;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.05;ReadPosRankSum=-1.531;SOR=1.609 GT:AD:DP:GQ:PL 0/1:8,7:15:99:239,0,240 chr1 246636937 . G A 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.358;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=1.922;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.14;ReadPosRankSum=0.562;SOR=1.508 GT:AD:DP:GQ:PL 0/1:9,11:20:99:331,0,214 chr1 246637027 . T A 259.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.623;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.017;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=-0.509;SOR=0.700 GT:AD:DP:GQ:PL 0/1:6,14:20:99:288,0,153 chr1 246639566 . A G 564.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.634;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.970;SOR=0.732 GT:AD:DP:GQ:PL 0/1:20,23:43:99:593,0,468 chr1 246641522 . T C 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.057;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-1.915;SOR=2.712 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,114 chr1 246674577 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 246677064 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 246677106 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 246689533 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 246692313 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 246692321 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 246692327 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 246692333 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 246740352 . G C 414.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.538;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=1.792;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.36;ReadPosRankSum=-0.349;SOR=1.449 GT:AD:DP:GQ:PL 0/1:12,15:27:99:443,0,318 chr1 246758822 . G T 197.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.807;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.89;ReadPosRankSum=1.174;SOR=0.090 GT:AD:DP:GQ:PL 0/1:12,8:20:99:226,0,409 chr1 246766181 . A G 1461.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.290;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=0.241;SOR=0.678 GT:AD:DP:GQ:PL 0/1:53,56:109:99:1490,0,1378 chr1 246767262 . G C 849.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.569;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=6.449;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.80;ReadPosRankSum=-2.296;SOR=1.569 GT:AD:DP:GQ:PL 0/1:36,36:72:99:878,0,916 chr1 246776211 . G A 1149.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.902;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=3.847;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.65;ReadPosRankSum=-0.901;SOR=1.165 GT:AD:DP:GQ:PL 0/1:64,44:108:99:1178,0,1770 chr1 246776554 . G A 1713.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.805;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.43;ReadPosRankSum=0.956;SOR=0.671 GT:AD:DP:GQ:PL 0/1:80,70:150:99:1742,0,2120 chr1 246776641 . T C 2041.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.475;ClippingRankSum=0.000;DP=181;ExcessHet=3.0103;FS=3.492;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.28;ReadPosRankSum=0.680;SOR=0.465 GT:AD:DP:GQ:PL 0/1:107,74:181:99:2070,0,3019 chr1 246776877 . G A 4433.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.715;ClippingRankSum=0.000;DP=253;ExcessHet=3.0103;FS=5.930;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.52;ReadPosRankSum=0.307;SOR=1.036 GT:AD:DP:GQ:PL 0/1:136,117:253:99:4462,0,7853 chr1 246776880 . C A 4495.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.908;ClippingRankSum=0.000;DP=251;ExcessHet=3.0103;FS=6.839;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.91;ReadPosRankSum=0.075;SOR=1.066 GT:AD:DP:GQ:PL 0/1:134,117:251:99:4524,0,7865 chr1 246777140 . T C 1129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.144;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.48;ReadPosRankSum=-0.354;SOR=0.643 GT:AD:DP:GQ:PL 0/1:26,32:58:99:1158,0,899 chr1 246778857 . G A 2531.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.851;ClippingRankSum=0.000;DP=239;ExcessHet=3.0103;FS=2.293;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.59;ReadPosRankSum=1.175;SOR=0.881 GT:AD:DP:GQ:PL 0/1:138,101:239:99:2560,0,3651 chr1 246805959 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 246842858 . G T 457.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.52;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,15:15:45:486,45,0 chr1 246853485 . G A 1051.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.79;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1080,90,0 chr1 246862229 . C T 427.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.13;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:456,33,0 chr1 246867935 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 246869138 . C T 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr1 246885532 . T C 260.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.769;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=52.99;MQRankSum=-0.963;QD=17.38;ReadPosRankSum=0.135;SOR=2.030 GT:AD:DP:GQ:PL 0/1:7,8:15:99:289,0,181 chr1 246891228 . T C 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=0.651;SOR=0.293 GT:AD:DP:GQ:PL 0/1:5,7:12:99:256,0,173 chr1 246894029 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr1 246945712 . G C 504.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.663;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=0.551;SOR=0.679 GT:AD:DP:GQ:PL 0/1:29,21:50:99:533,0,845 chr1 246945866 . G A 2264.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.051;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=3.312;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.61;ReadPosRankSum=0.333;SOR=0.935 GT:AD:DP:GQ:PL 0/1:106,89:195:99:2293,0,2869 chr1 246945965 . A C 2929.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.347;ClippingRankSum=0.000;DP=164;ExcessHet=3.0103;FS=3.777;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.97;ReadPosRankSum=0.643;SOR=0.460 GT:AD:DP:GQ:PL 0/1:79,84:163:99:2958,0,3864 chr1 246945994 . A G 2481.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.968;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=5.458;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.21;ReadPosRankSum=-0.284;SOR=0.311 GT:AD:DP:GQ:PL 0/1:56,61:117:99:2510,0,3387 chr1 246946106 . G A 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.484;SOR=2.494 GT:AD:DP:GQ:PL 0/1:3,4:7:70:146,0,70 chr1 246966643 . A G 296.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.917;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=3.197;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.84;ReadPosRankSum=0.800;SOR=0.105 GT:AD:DP:GQ:PL 0/1:9,11:20:99:325,0,316 chr1 246976605 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 246976611 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 246979790 . T A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 246979828 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 246979966 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 246987438 . T C 1671.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.15;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1700,156,0 chr1 246988255 . A G 996.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.15;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1025,96,0 chr1 246990271 . A T 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr1 246994575 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 246999356 . C T 9090.77 PASS AC=2;AF=1.00;AN=2;DP=288;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.68;SOR=1.131 GT:AD:DP:GQ:PL 1/1:0,287:287:99:9119,861,0 chr1 246999885 . T C 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.51;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr1 247039151 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 247182090 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.65;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 247182091 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.02;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 247182101 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.55;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 247182139 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.52;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 247182140 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.71;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 247182163 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:9:135,9,0 chr1 247182171 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247183743 . G A 876.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.24;SOR=3.528 GT:AD:DP:GQ:PL 1/1:0,25:25:75:905,75,0 chr1 247183767 . G C 1198.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.25;SOR=3.477 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1227,93,0 chr1 247185284 . G A 1244.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.64;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1273,110,0 chr1 247185436 . C T 528.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.39;SOR=2.448 GT:AD:DP:GQ:PL 1/1:0,15:15:45:557,45,0 chr1 247185472 . G C 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.83;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr1 247190053 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 247199994 . A C 386.74 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-1.162;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=4.260;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=24.17;ReadPosRankSum=-0.428;SOR=1.284 GT:AD:DP:GQ:PL 1/1:1,15:16:6:414,6,0 chr1 247205584 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247205585 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247256207 . T C 1077.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.66;SOR=1.542 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1106,99,0 chr1 247256362 . C T 1835.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.00;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1864,162,0 chr1 247269849 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247269856 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247295620 . T C 545.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.85;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:39:574,39,0 chr1 247295622 . A T 545.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.00;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:39:574,39,0 chr1 247310587 . C T 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.109;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.38;ReadPosRankSum=0.380;SOR=0.869 GT:AD:DP:GQ:PL 0/1:17,9:26:99:298,0,598 chr1 247322630 . A G 1125.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.21;SOR=3.545 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1154,96,0 chr1 247322911 . G A 1609.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.614;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=0.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.48;ReadPosRankSum=-0.870;SOR=0.765 GT:AD:DP:GQ:PL 0/1:63,66:129:99:1638,0,1586 chr1 247323119 . G C 834.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.537;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=4.801;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.71;ReadPosRankSum=-0.015;SOR=0.307 GT:AD:DP:GQ:PL 0/1:51,35:86:99:863,0,1518 chr1 247323376 . T C 1179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.323;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.907;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=-0.162;SOR=0.884 GT:AD:DP:GQ:PL 0/1:40,42:82:99:1208,0,967 chr1 247329729 . C G 113.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.335;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.34;ReadPosRankSum=-0.699;SOR=0.120 GT:AD:DP:GQ:PL 0/1:6,5:11:99:142,0,218 chr1 247333917 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 247335265 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 247363866 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 247381465 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 247381498 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 247395446 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 247423034 . T C 1221.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.59;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1250,102,0 chr1 247423618 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 247424229 . A G 9691.77 PASS AC=2;AF=1.00;AN=2;DP=279;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.74;SOR=1.208 GT:AD:DP:GQ:PL 1/1:0,279:279:99:9720,838,0 chr1 247434027 . C T 556.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.57;QD=35.72;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:39:585,39,0 chr1 247434327 . C T 6593.77 PASS AC=2;AF=1.00;AN=2;DP=192;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.52;SOR=1.987 GT:AD:DP:GQ:PL 1/1:0,191:191:99:6622,574,0 chr1 247443437 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.92;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 247443439 . C A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.17;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr1 247444340 . C T 938.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.471;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=0.881;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.29;ReadPosRankSum=0.427;SOR=0.865 GT:AD:DP:GQ:PL 0/1:64,37:101:99:967,0,1949 chr1 247451315 . C T 4728.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.333;ClippingRankSum=0.000;DP=379;ExcessHet=3.0103;FS=2.156;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.51;ReadPosRankSum=-0.020;SOR=0.763 GT:AD:DP:GQ:PL 0/1:192,186:378:99:4757,0,5343 chr1 247451391 . C T 13357.77 PASS AC=2;AF=1.00;AN=2;DP=402;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.31;SOR=0.728 GT:AD:DP:GQ:PL 1/1:0,401:401:99:13386,1203,0 chr1 247451594 . A C 11459.77 PASS AC=2;AF=1.00;AN=2;DP=324;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.94;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,323:323:99:11488,971,0 chr1 247452168 . T C 401.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.48;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,12:12:36:430,36,0 chr1 247452478 . A G 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr1 247454449 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247454453 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247455143 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 247459751 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247459762 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247476755 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 247491691 . T C 2638.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.845;ClippingRankSum=0.000;DP=255;ExcessHet=3.0103;FS=3.498;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.35;ReadPosRankSum=0.488;SOR=0.642 GT:AD:DP:GQ:PL 0/1:147,108:255:99:2667,0,4013 chr1 247491973 . T C 2324.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.006;ClippingRankSum=0.000;DP=214;ExcessHet=3.0103;FS=1.663;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.91;ReadPosRankSum=1.262;SOR=0.584 GT:AD:DP:GQ:PL 0/1:116,97:213:99:2353,0,3023 chr1 247492214 . C T 580.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.050;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=1.938;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.36;ReadPosRankSum=0.283;SOR=0.380 GT:AD:DP:GQ:PL 0/1:10,20:30:99:609,0,293 chr1 247518011 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 247527018 . C T 1934.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.332;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=0.583;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.73;ReadPosRankSum=-0.430;SOR=0.792 GT:AD:DP:GQ:PL 0/1:85,80:165:99:1963,0,2141 chr1 247532310 . G A 11080.77 PASS AC=2;AF=1.00;AN=2;DP=318;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.96;SOR=1.485 GT:AD:DP:GQ:PL 1/1:0,317:317:99:11109,951,0 chr1 247532454 . T C 5250.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.376;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.21;ReadPosRankSum=1.132;SOR=1.151 GT:AD:DP:GQ:PL 1/1:2,161:163:99:5279,439,0 chr1 247532656 . T C 305.78 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.49;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 247532745 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 247538816 . C T 1184.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.345;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=4.744;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.80;ReadPosRankSum=-0.859;SOR=1.358 GT:AD:DP:GQ:PL 0/1:35,40:75:99:1213,0,1020 chr1 247549001 . T C 383.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.300;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.71;ReadPosRankSum=-0.124;SOR=1.292 GT:AD:DP:GQ:PL 0/1:16,12:28:99:412,0,550 chr1 247565660 . C T 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=-0.329;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:259,0,134 chr1 247588717 . G C 6593.77 PASS AC=2;AF=1.00;AN=2;DP=190;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.70;SOR=0.924 GT:AD:DP:GQ:PL 1/1:0,190:190:99:6622,570,0 chr1 247588807 . A G 3774.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.590;ClippingRankSum=0.000;DP=260;ExcessHet=3.0103;FS=3.549;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.52;ReadPosRankSum=0.206;SOR=0.935 GT:AD:DP:GQ:PL 0/1:125,135:260:99:3803,0,3537 chr1 247588859 . T C 3941.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.600;ClippingRankSum=0.000;DP=319;ExcessHet=3.0103;FS=3.008;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.40;ReadPosRankSum=-0.038;SOR=0.536 GT:AD:DP:GQ:PL 0/1:161,157:318:99:3970,0,4214 chr1 247589065 . A G 2298.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.204;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=6.922;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.52;ReadPosRankSum=0.091;SOR=0.365 GT:AD:DP:GQ:PL 0/1:88,82:170:99:2327,0,2665 chr1 247590881 . A C 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr1 247605760 . A G 1069.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.100;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.63;ReadPosRankSum=-0.339;SOR=0.715 GT:AD:DP:GQ:PL 0/1:52,40:92:99:1098,0,1394 chr1 247606290 . C T 1453.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.596;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=5.506;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.45;ReadPosRankSum=-0.866;SOR=1.120 GT:AD:DP:GQ:PL 0/1:75,52:127:99:1482,0,1988 chr1 247606450 . A G 882.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.828;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=2.724;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.74;ReadPosRankSum=-0.721;SOR=1.038 GT:AD:DP:GQ:PL 0/1:61,40:101:99:911,0,1635 chr1 247672050 . C T 989.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.24;SOR=4.255 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1018,78,0 chr1 247672648 . T C 7687.77 PASS AC=2;AF=1.00;AN=2;DP=230;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.43;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,230:230:99:7716,690,0 chr1 247677822 . G C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 247677875 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247677894 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247757798 . T G 5717.77 PASS AC=2;AF=1.00;AN=2;DP=167;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.24;SOR=0.944 GT:AD:DP:GQ:PL 1/1:0,167:167:99:5746,501,0 chr1 247758050 . C T 3286.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.54;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,98:98:99:3315,294,0 chr1 247758415 . C A 2005.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.35;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2034,186,0 chr1 247775267 . C T 198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.464;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.07;ReadPosRankSum=-0.660;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,8:11:58:227,0,58 chr1 247789278 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247789280 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247814785 . G A 1178.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.32;SOR=2.517 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1207,99,0 chr1 247814833 . C A 776.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.450;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=0.715;SOR=0.602 GT:AD:DP:GQ:PL 0/1:30,31:61:99:805,0,933 chr1 247815017 . A G 4655.77 PASS AC=2;AF=1.00;AN=2;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.11;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,145:145:99:4684,435,0 chr1 247815694 . A G 2291.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.21;SOR=1.146 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2320,201,0 chr1 247827390 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 247827484 . G A 197.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.72;ReadPosRankSum=-1.242;SOR=1.863 GT:AD:DP:GQ:PL 0/1:2,6:8:59:226,0,59 chr1 247827630 . G A 419.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.161;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=2.552;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.93;ReadPosRankSum=0.116;SOR=0.934 GT:AD:DP:GQ:PL 0/1:28,19:47:99:448,0,654 chr1 247827849 . A G 919.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.342;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=1.978;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.33;ReadPosRankSum=0.248;SOR=0.964 GT:AD:DP:GQ:PL 0/1:31,38:69:99:948,0,820 chr1 247828216 . A T 587.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.386;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=3.488;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.29;ReadPosRankSum=-0.321;SOR=0.248 GT:AD:DP:GQ:PL 0/1:16,18:34:99:616,0,534 chr1 247828307 . G A 450.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.845;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=0.162;SOR=0.671 GT:AD:DP:GQ:PL 0/1:16,18:34:99:479,0,452 chr1 247828416 . C A 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.691;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.27;ReadPosRankSum=-0.839;SOR=0.582 GT:AD:DP:GQ:PL 0/1:11,10:21:99:286,0,294 chr1 247828494 . C G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr1 247833371 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 247833587 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247833588 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247833671 . T G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr1 247841312 . G A 8300.77 PASS AC=2;AF=1.00;AN=2;DP=236;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.40;SOR=1.126 GT:AD:DP:GQ:PL 1/1:0,235:235:99:8329,706,0 chr1 247841385 . C G 8767.77 PASS AC=2;AF=1.00;AN=2;DP=268;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.72;SOR=0.870 GT:AD:DP:GQ:PL 1/1:0,268:268:99:8796,804,0 chr1 247841473 . C T 7565.77 PASS AC=2;AF=1.00;AN=2;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.55;SOR=1.413 GT:AD:DP:GQ:PL 1/1:0,219:219:99:7594,658,0 chr1 247841546 . G C 6044.77 PASS AC=2;AF=1.00;AN=2;DP=167;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.29;SOR=0.974 GT:AD:DP:GQ:PL 1/1:0,167:167:99:6073,502,0 chr1 247841575 . C T 7466.77 PASS AC=2;AF=1.00;AN=2;DP=165;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.75;SOR=0.755 GT:AD:DP:GQ:PL 1/1:0,165:165:99:7495,518,0 chr1 247841582 . T C 7354.77 PASS AC=2;AF=1.00;AN=2;DP=164;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.71;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,164:164:99:7383,506,0 chr1 247841911 . G C 3962.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=0.380;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=2.491;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=26.78;ReadPosRankSum=0.191;SOR=1.029 GT:AD:DP:GQ:PL 1/1:3,145:148:99:3991,346,0 chr1 247858459 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247858463 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247860382 . T G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr1 247860664 . C T 835.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.176;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.18;ReadPosRankSum=-1.623;SOR=0.728 GT:AD:DP:GQ:PL 0/1:54,37:91:99:864,0,1393 chr1 247860771 . A C 330.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.883;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.03;ReadPosRankSum=0.026;SOR=0.368 GT:AD:DP:GQ:PL 0/1:18,12:30:99:359,0,628 chr1 247864658 . C T 3253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.677;ClippingRankSum=0.000;DP=255;ExcessHet=3.0103;FS=4.273;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=0.510;SOR=0.945 GT:AD:DP:GQ:PL 0/1:130,125:255:99:3282,0,3561 chr1 247876411 . A G 1267.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.060;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.74;ReadPosRankSum=0.991;SOR=0.675 GT:AD:DP:GQ:PL 0/1:60,48:108:99:1296,0,1706 chr1 247895453 . A G 883.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.05;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,24:24:72:912,72,0 chr1 247895495 . T G 1816.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.47;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1845,144,0 chr1 247895543 . A C 3402.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.41;SOR=2.193 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3431,314,0 chr1 247895577 . A T 4900.77 PASS AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.34;SOR=1.742 GT:AD:DP:GQ:PL 1/1:0,147:147:99:4929,444,0 chr1 247896401 . T A 4106.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-4.277;ClippingRankSum=0.000;DP=170;ExcessHet=3.0103;FS=9.513;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.16;ReadPosRankSum=0.057;SOR=0.301 GT:AD:DP:GQ:PL 0/1:64,106:170:99:4135,0,3743 chr1 247896410 . T C 3966.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-4.395;ClippingRankSum=0.000;DP=164;ExcessHet=3.0103;FS=4.679;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.19;ReadPosRankSum=0.644;SOR=0.429 GT:AD:DP:GQ:PL 0/1:65,99:164:99:3995,0,3738 chr1 247896554 . T C 1458.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.916;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=1.497;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.02;ReadPosRankSum=0.495;SOR=0.853 GT:AD:DP:GQ:PL 0/1:58,54:112:99:1487,0,1528 chr1 247896727 . A G 1243.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.62;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1272,111,0 chr1 247897798 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247897806 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 247920920 . T C 378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.727;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.63;ReadPosRankSum=0.296;SOR=0.910 GT:AD:DP:GQ:PL 0/1:17,13:30:99:407,0,528 chr1 247921132 . G A 982.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.147;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=18.383;MLEAC=1;MLEAF=0.500;MQ=47.90;MQRankSum=1.262;QD=7.86;ReadPosRankSum=-0.111;SOR=1.732 GT:AD:DP:GQ:PL 0/1:82,43:125:99:1011,0,2137 chr1 247921162 . T C 3595.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.154;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.63;MQRankSum=-0.326;QD=32.39;ReadPosRankSum=1.434;SOR=1.423 GT:AD:DP:GQ:PL 1/1:2,109:111:99:3624,283,0 chr1 247921169 . A G 1086.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.674;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=11.076;MLEAC=1;MLEAF=0.500;MQ=41.82;MQRankSum=-0.891;QD=10.06;ReadPosRankSum=0.341;SOR=1.810 GT:AD:DP:GQ:PL 0/1:76,32:108:99:1115,0,3084 chr1 247921171 . C A 906.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.207;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=19.792;MLEAC=1;MLEAF=0.500;MQ=41.82;MQRankSum=0.495;QD=8.40;ReadPosRankSum=-0.095;SOR=2.699 GT:AD:DP:GQ:PL 0/1:80,28:108:99:935,0,3264 chr1 247921806 . C T 1388.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.163;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=11.257;MLEAC=1;MLEAF=0.500;MQ=51.90;MQRankSum=-0.886;QD=10.77;ReadPosRankSum=-0.396;SOR=1.526 GT:AD:DP:GQ:PL 0/1:74,55:129:99:1417,0,2034 chr1 247921822 . G A 1694.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.498;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=3.093;MLEAC=1;MLEAF=0.500;MQ=53.97;MQRankSum=2.309;QD=12.28;ReadPosRankSum=0.812;SOR=0.997 GT:AD:DP:GQ:PL 0/1:73,65:138:99:1723,0,1916 chr1 247922039 . T A 1006.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.356;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.78;ReadPosRankSum=-0.049;SOR=0.594 GT:AD:DP:GQ:PL 0/1:26,34:60:99:1035,0,763 chr1 247922107 . T A 185.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.48;ReadPosRankSum=-0.172;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:214,0,210 chr1 247949325 . T C 2274.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.582;ClippingRankSum=0.000;DP=297;ExcessHet=3.0103;FS=15.836;MLEAC=1;MLEAF=0.500;MQ=54.19;MQRankSum=3.492;QD=7.69;ReadPosRankSum=-0.403;SOR=0.895 GT:AD:DP:GQ:PL 0/1:199,97:296:99:2303,0,5705 chr1 247949443 . G T 1801.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.294;ClippingRankSum=0.000;DP=275;ExcessHet=3.0103;FS=1.686;MLEAC=1;MLEAF=0.500;MQ=52.61;MQRankSum=-8.705;QD=6.55;ReadPosRankSum=0.579;SOR=0.561 GT:AD:DP:GQ:PL 0/1:203,72:275:99:1830,0,6330 chr1 247949452 . T C 893.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.327;ClippingRankSum=0.000;DP=268;ExcessHet=3.0103;FS=10.796;MLEAC=1;MLEAF=0.500;MQ=53.44;MQRankSum=-5.250;QD=3.33;ReadPosRankSum=-0.222;SOR=1.427 GT:AD:DP:GQ:PL 0/1:217,51:268:99:922,0,7268 chr1 247949460 . T C 2473.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.050;ClippingRankSum=0.000;DP=258;ExcessHet=3.0103;FS=2.379;MLEAC=1;MLEAF=0.500;MQ=54.28;MQRankSum=-8.405;QD=9.59;ReadPosRankSum=0.900;SOR=0.522 GT:AD:DP:GQ:PL 0/1:185,73:258:99:2502,0,7774 chr1 247949461 . G A 2473.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.593;ClippingRankSum=0.000;DP=258;ExcessHet=3.0103;FS=3.119;MLEAC=1;MLEAF=0.500;MQ=54.32;MQRankSum=-8.454;QD=9.59;ReadPosRankSum=0.966;SOR=0.504 GT:AD:DP:GQ:PL 0/1:185,73:258:99:2502,0,7776 chr1 247949469 . C T 2545.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.359;ClippingRankSum=0.000;DP=247;ExcessHet=3.0103;FS=3.149;MLEAC=1;MLEAF=0.500;MQ=54.42;MQRankSum=-8.366;QD=10.31;ReadPosRankSum=1.017;SOR=0.514 GT:AD:DP:GQ:PL 0/1:175,72:247:99:2574,0,7308 chr1 247949507 . A G 1586.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.223;ClippingRankSum=0.000;DP=198;ExcessHet=3.0103;FS=1.179;MLEAC=1;MLEAF=0.500;MQ=56.55;MQRankSum=-4.870;QD=8.01;ReadPosRankSum=0.057;SOR=0.570 GT:AD:DP:GQ:PL 0/1:129,69:198:99:1615,0,3526 chr1 247949534 . A G 1545.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.766;ClippingRankSum=0.000;DP=169;ExcessHet=3.0103;FS=2.807;MLEAC=1;MLEAF=0.500;MQ=58.46;MQRankSum=-5.308;QD=9.15;ReadPosRankSum=-0.470;SOR=0.491 GT:AD:DP:GQ:PL 0/1:103,66:169:99:1574,0,3038 chr1 247949724 . T A 1844.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.291;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=1.275;MLEAC=1;MLEAF=0.500;MQ=56.00;MQRankSum=-0.376;QD=12.22;ReadPosRankSum=-0.140;SOR=0.832 GT:AD:DP:GQ:PL 0/1:76,75:151:99:1873,0,2058 chr1 247949738 . A G 4861.77 PASS AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.97;QD=32.20;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,151:151:99:4890,453,0 chr1 247949904 . C G 595.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.008;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=1.256;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.77;ReadPosRankSum=0.952;SOR=0.951 GT:AD:DP:GQ:PL 0/1:37,24:61:99:624,0,1078 chr1 247965681 . A T 1294.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.126;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.79;ReadPosRankSum=0.498;SOR=0.746 GT:AD:DP:GQ:PL 0/1:68,52:120:99:1323,0,2047 chr1 247965938 . G A 2467.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.936;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.75;ReadPosRankSum=-0.127;SOR=0.715 GT:AD:DP:GQ:PL 0/1:57,82:139:99:2496,0,1522 chr1 247967734 . T C 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=0.000;SOR=0.368 GT:AD:DP:GQ:PL 0/1:2,4:6:66:115,0,66 chr1 247975218 . A G 378.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.14;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:39:407,39,0 chr1 247975229 . A G 385.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.55;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:42:414,42,0 chr1 247975275 . C A 632.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.64;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,20:20:60:661,60,0 chr1 247975286 . G A 632.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.13;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,21:21:63:661,63,0 chr1 247975340 . A G 631.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.59;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:60:660,60,0 chr1 247975546 . G C 2883.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.04;SOR=1.295 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2912,269,0 chr1 247984179 . T G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:74:81,0,74 chr1 247984180 . T C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:74:81,0,74 chr1 248003170 . C T 442.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.011;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.25;ReadPosRankSum=-0.495;SOR=0.519 GT:AD:DP:GQ:PL 0/1:6,17:23:99:471,0,147 chr1 248003224 . T C 474.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.102;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=3.769;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.26;ReadPosRankSum=-0.063;SOR=0.242 GT:AD:DP:GQ:PL 0/1:8,18:26:99:503,0,210 chr1 248003765 . C G 1883.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.705;ClippingRankSum=0.000;DP=215;ExcessHet=3.0103;FS=4.104;MLEAC=1;MLEAF=0.500;MQ=52.70;MQRankSum=-0.465;QD=8.76;ReadPosRankSum=-0.586;SOR=0.988 GT:AD:DP:GQ:PL 0/1:138,77:215:99:1912,0,3436 chr1 248003790 . T C 2153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.124;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=1.992;MLEAC=1;MLEAF=0.500;MQ=52.35;MQRankSum=-3.595;QD=11.64;ReadPosRankSum=0.173;SOR=0.881 GT:AD:DP:GQ:PL 0/1:123,62:185:99:2182,0,5005 chr1 248003794 . C T 2116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.334;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=2.055;MLEAC=1;MLEAF=0.500;MQ=52.33;MQRankSum=-3.688;QD=12.10;ReadPosRankSum=0.490;SOR=0.863 GT:AD:DP:GQ:PL 0/1:117,58:175:99:2145,0,4966 chr1 248003828 . A G 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.044;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=30.128;MLEAC=1;MLEAF=0.500;MQ=56.43;MQRankSum=-6.209;QD=2.06;ReadPosRankSum=-0.787;SOR=4.904 GT:AD:DP:GQ:PL 0/1:110,15:125:99:286,0,4650 chr1 248003884 . A G 1034.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.084;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=9.871;MLEAC=1;MLEAF=0.500;MQ=56.47;MQRankSum=-7.477;QD=10.25;ReadPosRankSum=1.106;SOR=0.634 GT:AD:DP:GQ:PL 0/1:63,38:101:99:1063,0,2004 chr1 248003901 . C T 914.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.677;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=6.262;MLEAC=1;MLEAF=0.500;MQ=57.50;MQRankSum=-5.411;QD=8.47;ReadPosRankSum=-0.107;SOR=0.707 GT:AD:DP:GQ:PL 0/1:68,40:108:99:943,0,2056 chr1 248004117 . G T 1565.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.702;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=4.059;MLEAC=1;MLEAF=0.500;MQ=56.56;MQRankSum=1.650;QD=15.35;ReadPosRankSum=1.682;SOR=0.392 GT:AD:DP:GQ:PL 0/1:43,59:102:99:1594,0,1217 chr1 248021748 . T C 239.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=29.98;ReadPosRankSum=-0.489;SOR=2.833 GT:AD:DP:GQ:PL 0/1:1,7:8:18:268,0,18 chr1 248038554 . G A 2129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.323;ClippingRankSum=0.000;DP=199;ExcessHet=3.0103;FS=7.555;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.70;ReadPosRankSum=-0.111;SOR=1.226 GT:AD:DP:GQ:PL 0/1:119,80:199:99:2158,0,3158 chr1 248038872 . G C 2875.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.072;ClippingRankSum=0.000;DP=255;ExcessHet=3.0103;FS=7.814;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.28;ReadPosRankSum=-0.404;SOR=1.063 GT:AD:DP:GQ:PL 0/1:142,113:255:99:2904,0,3909 chr1 248038981 . A G 2403.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.480;ClippingRankSum=0.000;DP=187;ExcessHet=3.0103;FS=6.160;MLEAC=1;MLEAF=0.500;MQ=59.91;MQRankSum=-1.133;QD=12.85;ReadPosRankSum=-1.462;SOR=0.649 GT:AD:DP:GQ:PL 0/1:106,81:187:99:2432,0,3318 chr1 248039042 . G C 2511.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.050;ClippingRankSum=0.000;DP=204;ExcessHet=3.0103;FS=5.764;MLEAC=1;MLEAF=0.500;MQ=59.92;MQRankSum=-1.040;QD=12.31;ReadPosRankSum=-0.133;SOR=0.873 GT:AD:DP:GQ:PL 0/1:107,97:204:99:2540,0,2991 chr1 248039220 . G C 2205.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.019;ClippingRankSum=0.000;DP=198;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.20;ReadPosRankSum=0.504;SOR=0.675 GT:AD:DP:GQ:PL 0/1:107,90:197:99:2234,0,2827 chr1 248060797 . T C 393.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.603;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=3.353;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.58;ReadPosRankSum=-0.140;SOR=0.284 GT:AD:DP:GQ:PL 0/1:19,15:34:99:422,0,594 chr1 248060914 . C T 1749.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.854;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.73;MQRankSum=-2.818;QD=12.68;ReadPosRankSum=0.745;SOR=0.652 GT:AD:DP:GQ:PL 0/1:70,68:138:99:1778,0,1919 chr1 248060992 . C T 2322.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.071;ClippingRankSum=0.000;DP=213;ExcessHet=3.0103;FS=3.101;MLEAC=1;MLEAF=0.500;MQ=56.74;MQRankSum=-8.202;QD=10.91;ReadPosRankSum=1.013;SOR=0.511 GT:AD:DP:GQ:PL 0/1:115,98:213:99:2351,0,3147 chr1 248061096 . A G 1663.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.367;ClippingRankSum=0.000;DP=194;ExcessHet=3.0103;FS=37.940;MLEAC=1;MLEAF=0.500;MQ=53.39;MQRankSum=-13.505;QD=8.58;ReadPosRankSum=0.643;SOR=1.925 GT:AD:DP:GQ:PL 0/1:126,68:194:99:1692,0,3865 chr1 248061452 . T C 1636.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.323;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=2.035;MLEAC=1;MLEAF=0.500;MQ=58.83;MQRankSum=-3.446;QD=10.84;ReadPosRankSum=0.405;SOR=0.597 GT:AD:DP:GQ:PL 0/1:84,67:151:99:1665,0,2442 chr1 248083467 . C T 243.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.38;ReadPosRankSum=2.287;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,8:10:53:272,0,53 chr1 248083484 . T A 338.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.365;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.06;ReadPosRankSum=1.342;SOR=2.147 GT:AD:DP:GQ:PL 0/1:3,10:13:86:367,0,86 chr1 248083838 . G C 370.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.905;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=20.153;MLEAC=1;MLEAF=0.500;MQ=50.27;MQRankSum=-1.230;QD=7.72;ReadPosRankSum=-0.761;SOR=4.523 GT:AD:DP:GQ:PL 0/1:35,13:48:99:399,0,1237 chr1 248083888 . G A 181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.728;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=20.707;MLEAC=1;MLEAF=0.500;MQ=44.24;MQRankSum=-3.211;QD=3.56;ReadPosRankSum=1.248;SOR=3.028 GT:AD:DP:GQ:PL 0/1:42,9:51:99:210,0,1400 chr1 248084061 . C T 997.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.745;ClippingRankSum=0.000;DP=232;ExcessHet=3.0103;FS=17.590;MLEAC=1;MLEAF=0.500;MQ=44.08;MQRankSum=-0.091;QD=4.30;ReadPosRankSum=-1.355;SOR=1.770 GT:AD:DP:GQ:PL 0/1:179,53:232:99:1026,0,4658 chr1 248084158 . G A 1092.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.373;ClippingRankSum=0.000;DP=191;ExcessHet=3.0103;FS=21.438;MLEAC=1;MLEAF=0.500;MQ=44.94;MQRankSum=-5.336;QD=5.72;ReadPosRankSum=-0.563;SOR=2.387 GT:AD:DP:GQ:PL 0/1:153,38:191:99:1121,0,7087 chr1 248084159 . G C 1092.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.120;ClippingRankSum=0.000;DP=192;ExcessHet=3.0103;FS=23.536;MLEAC=1;MLEAF=0.500;MQ=44.91;MQRankSum=-5.315;QD=5.69;ReadPosRankSum=-0.608;SOR=2.416 GT:AD:DP:GQ:PL 0/1:154,38:192:99:1121,0,7087 chr1 248084161 . C T 1482.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.351;ClippingRankSum=0.000;DP=187;ExcessHet=3.0103;FS=0.588;MLEAC=1;MLEAF=0.500;MQ=44.74;MQRankSum=4.320;QD=7.93;ReadPosRankSum=1.203;SOR=0.745 GT:AD:DP:GQ:PL 0/1:122,65:187:99:1511,0,3873 chr1 248084290 . G C 1952.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.562;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=2.686;MLEAC=1;MLEAF=0.500;MQ=40.37;MQRankSum=1.498;QD=19.93;ReadPosRankSum=-1.478;SOR=0.446 GT:AD:DP:GQ:PL 0/1:46,52:98:99:1981,0,2014 chr1 248084336 . T C 436.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.098;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=6.847;MLEAC=1;MLEAF=0.500;MQ=47.74;MQRankSum=-3.146;QD=5.20;ReadPosRankSum=1.201;SOR=1.469 GT:AD:DP:GQ:PL 0/1:63,21:84:99:465,0,1686 chr1 248084442 . G T 721.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.118;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=4.873;MLEAC=1;MLEAF=0.500;MQ=54.16;MQRankSum=-5.206;QD=8.80;ReadPosRankSum=2.081;SOR=1.089 GT:AD:DP:GQ:PL 0/1:59,23:82:99:750,0,2439 chr1 248084482 . C T 315.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.150;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=24.783;MLEAC=1;MLEAF=0.500;MQ=53.43;MQRankSum=-3.834;QD=3.40;ReadPosRankSum=0.205;SOR=1.875 GT:AD:DP:GQ:PL 0/1:74,19:93:99:344,0,2316 chr1 248084558 . C T 898.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.186;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=1.609;MLEAC=1;MLEAF=0.500;MQ=54.43;MQRankSum=-7.971;QD=8.48;ReadPosRankSum=0.503;SOR=0.918 GT:AD:DP:GQ:PL 0/1:65,41:106:99:927,0,1826 chr1 248100145 . C T 1897.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.940;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=3.314;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.18;ReadPosRankSum=1.283;SOR=1.022 GT:AD:DP:GQ:PL 0/1:50,75:125:99:1926,0,1394 chr1 248146021 . C G 1998.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.786;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.844;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.26;ReadPosRankSum=-0.720;SOR=0.840 GT:AD:DP:GQ:PL 0/1:29,65:94:99:2027,0,707 chr1 248146210 . A G 129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.849;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.65;ReadPosRankSum=-1.313;SOR=0.260 GT:AD:DP:GQ:PL 0/1:10,5:15:99:158,0,361 chr1 248149823 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 248180241 . C T 889.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.870;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=4.270;MLEAC=1;MLEAF=0.500;MQ=57.13;MQRankSum=0.539;QD=10.72;ReadPosRankSum=1.206;SOR=1.186 GT:AD:DP:GQ:PL 0/1:47,36:83:99:918,0,1369 chr1 248180643 . C G 1727.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.590;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.62;MQRankSum=-8.062;QD=12.43;ReadPosRankSum=-0.140;SOR=0.724 GT:AD:DP:GQ:PL 0/1:76,63:139:99:1756,0,2027 chr1 248180688 . T C 1427.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.244;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=0.673;MLEAC=1;MLEAF=0.500;MQ=55.26;MQRankSum=-8.562;QD=11.42;ReadPosRankSum=-0.540;SOR=0.791 GT:AD:DP:GQ:PL 0/1:72,53:125:99:1456,0,1971 chr1 248203400 . G A 1577.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.869;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=4.091;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.81;ReadPosRankSum=1.318;SOR=0.413 GT:AD:DP:GQ:PL 0/1:82,64:146:99:1606,0,2402 chr1 248204113 . C T 384.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.274;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=2.013;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.02;ReadPosRankSum=-1.538;SOR=1.206 GT:AD:DP:GQ:PL 0/1:19,13:32:99:413,0,583 chr1 248239456 . C T 1186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.045;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=2.238;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.98;ReadPosRankSum=1.303;SOR=1.102 GT:AD:DP:GQ:PL 0/1:24,42:66:99:1215,0,656 chr1 248272890 . T G 2774.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.789;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=3.426;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=-0.701;SOR=0.479 GT:AD:DP:GQ:PL 0/1:81,103:184:99:2803,0,2013 chr1 248273309 . G A 2568.79 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-1.800;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=13.289;MLEAC=2;MLEAF=1.00;MQ=50.18;MQRankSum=3.167;QD=27.92;ReadPosRankSum=2.434;SOR=0.037 GT:AD:DP:GQ:PL 1/1:7,85:92:22:2597,22,0 chr1 248273314 . A G 4174.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.27;QD=30.37;SOR=1.289 GT:AD:DP:GQ:PL 1/1:0,95:95:99:4203,286,0 chr1 248273479 . G A 324.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.027;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=1.689;MLEAC=1;MLEAF=0.500;MQ=45.46;MQRankSum=-0.612;QD=2.14;ReadPosRankSum=0.926;SOR=0.524 GT:AD:DP:GQ:PL 0/1:124,28:152:99:353,0,3504 chr1 248273503 . T G 4812.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=2.430;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=1.711;MLEAC=2;MLEAF=1.00;MQ=42.96;MQRankSum=3.621;QD=33.79;ReadPosRankSum=-0.230;SOR=1.306 GT:AD:DP:GQ:PL 1/1:6,130:136:99:4841,260,0 chr1 248273507 . G A 1625.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.944;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.50;MQRankSum=-2.366;QD=12.22;ReadPosRankSum=1.321;SOR=0.726 GT:AD:DP:GQ:PL 0/1:86,47:133:99:1654,0,3441 chr1 248273509 . G C 1625.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.698;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=1.567;MLEAC=1;MLEAF=0.500;MQ=42.01;MQRankSum=-3.000;QD=12.70;ReadPosRankSum=1.435;SOR=0.916 GT:AD:DP:GQ:PL 0/1:84,44:128:99:1654,0,3441 chr1 248273610 . T C 1073.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.952;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=43.73;MQRankSum=-6.648;QD=10.32;ReadPosRankSum=-1.881;SOR=0.728 GT:AD:DP:GQ:PL 0/1:71,33:104:99:1102,0,2045 chr1 248273623 . A G 526.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.469;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=18.396;MLEAC=1;MLEAF=0.500;MQ=43.82;MQRankSum=-4.869;QD=5.27;ReadPosRankSum=-0.908;SOR=2.691 GT:AD:DP:GQ:PL 0/1:77,23:100:99:555,0,3567 chr1 248273670 . A G 1068.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.629;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=20.384;MLEAC=1;MLEAF=0.500;MQ=46.20;MQRankSum=-1.809;QD=9.29;ReadPosRankSum=-0.245;SOR=2.278 GT:AD:DP:GQ:PL 0/1:75,40:115:99:1097,0,1918 chr1 248273817 . T G 1508.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.529;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=2.413;MLEAC=1;MLEAF=0.500;MQ=56.52;MQRankSum=-2.321;QD=12.57;ReadPosRankSum=0.876;SOR=0.944 GT:AD:DP:GQ:PL 0/1:61,59:120:99:1537,0,1553 chr1 248294677 . C A 6099.77 PASS AC=2;AF=1.00;AN=2;DP=194;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.44;SOR=0.778 GT:AD:DP:GQ:PL 1/1:0,194:194:99:6128,581,0 chr1 248295117 . G C 507.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.811;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=40.375;MLEAC=1;MLEAF=0.500;MQ=45.41;MQRankSum=-5.742;QD=7.81;ReadPosRankSum=0.070;SOR=5.828 GT:AD:DP:GQ:PL 0/1:43,22:65:99:536,0,1173 chr1 248295374 . T C 4083.77 PASS AC=2;AF=1.00;AN=2;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.85;QD=34.32;SOR=2.021 GT:AD:DP:GQ:PL 1/1:0,119:119:99:4112,357,0 chr1 248295387 . A G 4577.77 PASS AC=2;AF=1.00;AN=2;DP=134;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.74;QD=34.16;SOR=1.793 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4606,403,0 chr1 248295415 . C G 1560.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.796;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=3.012;MLEAC=1;MLEAF=0.500;MQ=56.45;MQRankSum=-1.656;QD=9.75;ReadPosRankSum=0.292;SOR=0.998 GT:AD:DP:GQ:PL 0/1:102,58:160:99:1589,0,2899 chr1 248295672 . T A 1725.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.84;SOR=2.170 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1754,153,0 chr1 248306463 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 248306470 . G C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.16;MQRankSum=0.967;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:67:81,0,67 chr1 248306473 . T A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.16;MQRankSum=0.967;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:67:81,0,67 chr1 248316260 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 248316306 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr1 248316658 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.92;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr1 248316693 . A G 203.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:24:232,24,0 chr1 248323593 . G T 2726.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.52;SOR=2.455 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2755,237,0 chr1 248323611 . A G 3620.77 PASS AC=2;AF=1.00;AN=2;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.62;SOR=2.678 GT:AD:DP:GQ:PL 1/1:0,101:101:99:3649,304,0 chr1 248323998 . C T 2477.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.496;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=5.427;MLEAC=1;MLEAF=0.500;MQ=59.44;MQRankSum=1.114;QD=14.24;ReadPosRankSum=-0.673;SOR=1.105 GT:AD:DP:GQ:PL 0/1:84,90:174:99:2506,0,2556 chr1 248324036 . C A 6675.77 PASS AC=2;AF=1.00;AN=2;DP=191;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.47;QD=33.92;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,190:190:99:6704,571,0 chr1 248324336 . A G 4580.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.98;QD=29.95;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,124:124:99:4609,373,0 chr1 248324466 . A G 5297.77 PASS AC=2;AF=1.00;AN=2;DP=162;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.70;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,162:162:99:5326,486,0 chr1 248348626 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 248348762 . T G 1035.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.37;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1064,96,0 chr1 248348792 . C T 1295.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.79;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1324,135,0 chr1 248349335 . C T 4241.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.96;SOR=1.290 GT:AD:DP:GQ:PL 1/1:0,137:137:99:4270,409,0 chr1 248349447 . G A 3097.77 PASS AC=2;AF=1.00;AN=2;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.29;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,87:87:99:3126,261,0 chr1 248349465 . G T 2725.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.84;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2754,248,0 chr1 248349721 . G A 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.87;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr1 248349786 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr1 248369984 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 248387593 . T G 598.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.009;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.50;ReadPosRankSum=0.402;SOR=0.639 GT:AD:DP:GQ:PL 0/1:33,24:57:99:627,0,916 chr1 248387669 . A G 985.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.649;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.49;ReadPosRankSum=0.334;SOR=0.646 GT:AD:DP:GQ:PL 0/1:54,40:94:99:1014,0,1529 chr1 248387675 . T G 3616.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.71;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3645,292,0 chr1 248387778 . C A 940.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.024;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.794;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.12;ReadPosRankSum=0.555;SOR=0.828 GT:AD:DP:GQ:PL 0/1:55,38:93:99:969,0,1336 chr1 248387893 . C T 1142.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.076;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=9.559;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.41;ReadPosRankSum=0.505;SOR=0.293 GT:AD:DP:GQ:PL 0/1:27,29:56:99:1171,0,2286 chr1 248387902 . T C 1177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.350;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=5.752;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.22;ReadPosRankSum=-1.094;SOR=0.471 GT:AD:DP:GQ:PL 0/1:23,30:53:99:1206,0,2170 chr1 248387903 . G A 1177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.069;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=5.626;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.81;ReadPosRankSum=-1.116;SOR=0.368 GT:AD:DP:GQ:PL 0/1:23,31:54:99:1206,0,2170 chr1 248388084 . T C 2144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.257;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=2.368;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.43;ReadPosRankSum=-0.782;SOR=0.492 GT:AD:DP:GQ:PL 0/1:62,77:139:99:2173,0,1719 chr1 248388335 . T G 4244.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.273;ClippingRankSum=0.000;DP=314;ExcessHet=3.0103;FS=5.218;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.61;ReadPosRankSum=0.846;SOR=0.967 GT:AD:DP:GQ:PL 0/1:163,149:312:99:4273,0,4510 chr1 248388671 . T A 206.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=-0.635;SOR=0.321 GT:AD:DP:GQ:PL 0/1:12,7:19:99:235,0,441 chr1 248405981 . A G 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.972;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=2.447;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.05;ReadPosRankSum=0.526;SOR=0.223 GT:AD:DP:GQ:PL 0/1:8,7:15:99:179,0,243 chr1 248406068 . A G 628.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.976;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=1.106;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.03;ReadPosRankSum=1.330;SOR=0.985 GT:AD:DP:GQ:PL 0/1:32,25:57:99:657,0,825 chr1 248407139 . G A 3928.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=1.311 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3957,375,0 chr1 248407363 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 248441064 . A G 178.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.994;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.78;MQRankSum=-0.582;QD=8.51;ReadPosRankSum=1.482;SOR=0.175 GT:AD:DP:GQ:PL 0/1:15,6:21:99:207,0,612 chr1 248441083 . A G 237.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.39;MQRankSum=-1.282;QD=8.20;ReadPosRankSum=0.903;SOR=0.155 GT:AD:DP:GQ:PL 0/1:21,8:29:99:266,0,838 chr1 248441151 . A G 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.240;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=12.756;MLEAC=1;MLEAF=0.500;MQ=51.52;MQRankSum=-2.192;QD=4.19;ReadPosRankSum=-4.291;SOR=3.308 GT:AD:DP:GQ:PL 0/1:51,12:63:99:292,0,1996 chr1 248441164 . C T 1699.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.110;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=6.202;MLEAC=1;MLEAF=0.500;MQ=51.03;MQRankSum=-1.915;QD=24.63;ReadPosRankSum=-2.047;SOR=1.654 GT:AD:DP:GQ:PL 0/1:25,44:69:99:1728,0,971 chr1 248441241 . C T 2601.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.570;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=50.060;MLEAC=1;MLEAF=0.500;MQ=51.30;MQRankSum=4.493;QD=22.82;ReadPosRankSum=0.677;SOR=1.475 GT:AD:DP:GQ:PL 0/1:30,84:114:99:2630,0,790 chr1 248441313 . A T 3159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.986;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=46.73;MQRankSum=6.846;QD=19.03;ReadPosRankSum=2.051;SOR=0.718 GT:AD:DP:GQ:PL 0/1:52,114:166:99:3188,0,1319 chr1 248442135 . C G 2740.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.358;ClippingRankSum=0.000;DP=154;ExcessHet=3.0103;FS=2.493;MLEAC=1;MLEAF=0.500;MQ=52.78;MQRankSum=-10.519;QD=17.80;ReadPosRankSum=-0.429;SOR=0.480 GT:AD:DP:GQ:PL 0/1:80,74:154:99:2769,0,3483 chr1 248442141 . G T 2588.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.612;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=2.841;MLEAC=1;MLEAF=0.500;MQ=51.75;MQRankSum=-10.929;QD=19.04;ReadPosRankSum=-1.187;SOR=0.447 GT:AD:DP:GQ:PL 0/1:71,65:136:99:2617,0,3380 chr1 248444862 . T C 46.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.52;QD=23.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:74,6,0 chr1 248446777 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 248447740 . A T 52.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.80;QD=17.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:80,9,0 chr1 248453965 . C T 268.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.009;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.750;MLEAC=1;MLEAF=0.500;MQ=53.05;MQRankSum=-2.070;QD=12.80;ReadPosRankSum=0.803;SOR=0.121 GT:AD:DP:GQ:PL 0/1:13,8:21:99:297,0,536 chr1 248453975 . A G 277.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.402;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=7.375;MLEAC=1;MLEAF=0.500;MQ=50.71;MQRankSum=-0.867;QD=15.43;ReadPosRankSum=-1.177;SOR=0.044 GT:AD:DP:GQ:PL 0/1:10,8:18:99:306,0,437 chr1 248454028 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.126;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,207 chr1 248454038 . C G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,168 chr1 248454044 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,168 chr1 248520678 . C A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr1 248520701 . C A 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.81;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr1 248521952 . T C 6590.77 PASS AC=2;AF=1.00;AN=2;DP=206;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.31;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,204:204:99:6619,612,0 chr1 248522418 . A T 1507.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.818;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=2.480;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=0.308;SOR=0.948 GT:AD:DP:GQ:PL 0/1:49,58:107:99:1536,0,1492 chr1 248559582 . A G 2989.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.17;QD=28.30;SOR=3.193 GT:AD:DP:GQ:PL 1/1:0,68:68:99:3018,205,0 chr1 248574832 . A G 437.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.581;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=1.346;MLEAC=1;MLEAF=0.500;MQ=56.14;MQRankSum=-10.510;QD=3.53;ReadPosRankSum=-0.836;SOR=0.874 GT:AD:DP:GQ:PL 0/1:99,25:124:99:466,0,3390 chr1 248617049 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr1 248626010 . A G 394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.003;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.18;ReadPosRankSum=0.329;SOR=0.560 GT:AD:DP:GQ:PL 0/1:14,12:26:99:423,0,490 chr1 248626122 . A C 1855.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.805;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=6.821;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.28;ReadPosRankSum=-0.969;SOR=0.281 GT:AD:DP:GQ:PL 0/1:46,68:114:99:1884,0,1437 chr1 248626153 . G C 1866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.012;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=4.181;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.81;ReadPosRankSum=-0.414;SOR=1.069 GT:AD:DP:GQ:PL 0/1:93,65:158:99:1895,0,2694 chr1 248626203 . T C 7572.77 PASS AC=2;AF=1.00;AN=2;DP=228;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.21;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,228:228:99:7601,684,0 chr1 248626774 . A G 5362.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.078;ClippingRankSum=0.000;DP=416;ExcessHet=3.0103;FS=0.518;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.92;ReadPosRankSum=-0.918;SOR=0.743 GT:AD:DP:GQ:PL 0/1:209,206:415:99:5391,0,5525 chr1 248638210 . A G 2851.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.17;QD=32.63;SOR=6.770 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2880,193,0 chr1 248638227 . G A 3796.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.00;QD=28.07;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,83:83:99:3825,256,0 chr1 248638237 . G A 4426.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.07;QD=38.50;SOR=3.189 GT:AD:DP:GQ:PL 1/1:0,97:97:99:4455,298,0 chr1 248638241 . A G 4696.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.29;QD=28.14;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,100:100:99:4725,316,0 chr1 248638249 . C T 5596.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.32;QD=32.60;SOR=3.076 GT:AD:DP:GQ:PL 1/1:0,120:120:99:5625,376,0 chr1 248638255 . C T 6091.77 PASS AC=2;AF=1.00;AN=2;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.84;QD=36.31;SOR=3.074 GT:AD:DP:GQ:PL 1/1:0,131:131:99:6120,409,0 chr1 248638265 . T G 7396.77 PASS AC=2;AF=1.00;AN=2;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.54;QD=30.42;SOR=2.665 GT:AD:DP:GQ:PL 1/1:0,161:161:99:7425,497,0 chr1 248638291 . C T 8926.77 PASS AC=2;AF=1.00;AN=2;DP=197;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.31;QD=28.10;SOR=1.811 GT:AD:DP:GQ:PL 1/1:0,197:197:99:8955,599,0 chr1 248638309 . G A 9736.77 PASS AC=2;AF=1.00;AN=2;DP=212;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.35;QD=34.06;SOR=1.307 GT:AD:DP:GQ:PL 1/1:0,212:212:99:9765,653,0 chr1 248638310 . C T 9671.77 PASS AC=2;AF=1.00;AN=2;DP=215;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.23;QD=31.14;SOR=1.255 GT:AD:DP:GQ:PL 1/1:0,215:215:99:9700,650,0 chr1 248638332 . A G 9075.77 PASS AC=2;AF=1.00;AN=2;DP=207;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.47;QD=29.80;SOR=0.915 GT:AD:DP:GQ:PL 1/1:0,207:207:99:9104,626,0 chr1 248639462 . C T 235.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.37;QD=33.69;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:264,21,0 chr1 248649825 . G C 211.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.80;MQRankSum=-2.619;QD=8.47;ReadPosRankSum=0.848;SOR=0.163 GT:AD:DP:GQ:PL 0/1:18,7:25:99:240,0,735 chr1 248649833 . T G 411.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.588;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=9.379;MLEAC=1;MLEAF=0.500;MQ=52.93;MQRankSum=-1.384;QD=13.28;ReadPosRankSum=-0.702;SOR=0.049 GT:AD:DP:GQ:PL 0/1:20,11:31:99:440,0,804 chr1 248649838 . C G 444.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.424;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=8.735;MLEAC=1;MLEAF=0.500;MQ=53.78;MQRankSum=-1.180;QD=12.71;ReadPosRankSum=-0.820;SOR=0.061 GT:AD:DP:GQ:PL 0/1:22,13:35:99:473,0,877 chr1 248649874 . G A 734.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.515;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.87;MQRankSum=-2.438;QD=11.13;ReadPosRankSum=-0.476;SOR=0.623 GT:AD:DP:GQ:PL 0/1:39,27:66:99:763,0,1262 chr1 248649911 . T A 1389.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.344;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=2.206;MLEAC=1;MLEAF=0.500;MQ=56.36;MQRankSum=-5.521;QD=14.33;ReadPosRankSum=1.334;SOR=1.089 GT:AD:DP:GQ:PL 0/1:59,38:97:99:1418,0,2360 chr1 248649979 . C T 3118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.068;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=1.335;MLEAC=1;MLEAF=0.500;MQ=55.85;MQRankSum=9.553;QD=18.56;ReadPosRankSum=0.577;SOR=0.827 GT:AD:DP:GQ:PL 0/1:55,113:168:99:3147,0,1592 chr1 248649991 . T C 1367.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.350;ClippingRankSum=0.000;DP=177;ExcessHet=3.0103;FS=0.631;MLEAC=1;MLEAF=0.500;MQ=55.70;MQRankSum=-10.007;QD=7.73;ReadPosRankSum=-0.378;SOR=0.608 GT:AD:DP:GQ:PL 0/1:126,51:177:99:1396,0,3647 chr1 248650042 . A G 954.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.661;ClippingRankSum=0.000;DP=203;ExcessHet=3.0103;FS=2.119;MLEAC=1;MLEAF=0.500;MQ=51.87;MQRankSum=-10.805;QD=4.70;ReadPosRankSum=-1.262;SOR=0.534 GT:AD:DP:GQ:PL 0/1:158,45:203:99:983,0,4620 chr1 248650120 . G A 1798.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.271;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=14.547;MLEAC=1;MLEAF=0.500;MQ=48.97;MQRankSum=-8.470;QD=7.75;ReadPosRankSum=-0.503;SOR=0.942 GT:AD:DP:GQ:PL 0/1:157,75:232:99:1827,0,4470 chr1 248650172 . A C 2309.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.370;ClippingRankSum=0.000;DP=235;ExcessHet=3.0103;FS=13.437;MLEAC=1;MLEAF=0.500;MQ=51.38;MQRankSum=-3.781;QD=9.87;ReadPosRankSum=1.096;SOR=0.331 GT:AD:DP:GQ:PL 0/1:135,99:234:99:2338,0,3825 chr1 248650241 . G A 2294.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.228;ClippingRankSum=0.000;DP=229;ExcessHet=3.0103;FS=9.898;MLEAC=1;MLEAF=0.500;MQ=49.69;MQRankSum=3.584;QD=10.06;ReadPosRankSum=1.315;SOR=1.179 GT:AD:DP:GQ:PL 0/1:139,89:228:99:2323,0,3719 chr1 248650422 . C T 1297.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.058;ClippingRankSum=0.000;DP=252;ExcessHet=3.0103;FS=28.630;MLEAC=1;MLEAF=0.500;MQ=44.42;MQRankSum=-6.692;QD=5.15;ReadPosRankSum=4.744;SOR=0.719 GT:AD:DP:GQ:PL 0/1:184,68:252:99:1326,0,5250 chr1 248650779 . A C 6101.77 PASS AC=2;AF=1.00;AN=2;DP=207;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.17;QD=29.48;SOR=1.340 GT:AD:DP:GQ:PL 1/1:0,207:207:99:6130,624,0 chr1 248650825 . G A 1626.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.557;ClippingRankSum=0.000;DP=194;ExcessHet=3.0103;FS=11.028;MLEAC=1;MLEAF=0.500;MQ=41.42;MQRankSum=0.399;QD=8.43;ReadPosRankSum=0.227;SOR=0.276 GT:AD:DP:GQ:PL 0/1:117,76:193:99:1655,0,2858 chr1 248650915 . C T 834.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.308;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=15.686;MLEAC=1;MLEAF=0.500;MQ=50.16;MQRankSum=0.450;QD=18.97;ReadPosRankSum=-2.560;SOR=3.228 GT:AD:DP:GQ:PL 0/1:19,25:44:99:863,0,451 chr1 248651030 . G A 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.15;MQRankSum=1.383;QD=27.13;ReadPosRankSum=-0.210;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr1 248659884 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.70;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 248659918 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.64;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 248676450 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr1 248681796 . C T 4862.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.637;ClippingRankSum=0.000;DP=390;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.50;ReadPosRankSum=-0.293;SOR=0.690 GT:AD:DP:GQ:PL 0/1:199,190:389:99:4891,0,5476 chr1 248682110 . G A 5682.77 PASS AC=2;AF=1.00;AN=2;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.23;SOR=0.996 GT:AD:DP:GQ:PL 1/1:0,171:171:99:5711,513,0 chr1 248682157 . C T 1902.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.634;ClippingRankSum=0.000;DP=143;ExcessHet=3.0103;FS=3.964;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.31;ReadPosRankSum=1.521;SOR=0.448 GT:AD:DP:GQ:PL 0/1:74,69:143:99:1931,0,2131 chr1 248682170 . T C 1832.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.502;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=2.223;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=0.498;SOR=0.519 GT:AD:DP:GQ:PL 0/1:65,67:132:99:1861,0,1913 chr1 248682198 . A G 4217.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=1.010 GT:AD:DP:GQ:PL 1/1:0,121:121:99:4246,363,0 chr1 248739415 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.13;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr1 248739552 . G A 939.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.132;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.80;ReadPosRankSum=-0.347;SOR=0.512 GT:AD:DP:GQ:PL 0/1:22,28:50:99:968,0,730 chr1 248739879 . C T 4583.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.651;ClippingRankSum=0.000;DP=352;ExcessHet=3.0103;FS=3.529;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.02;ReadPosRankSum=-0.459;SOR=0.878 GT:AD:DP:GQ:PL 0/1:185,167:352:99:4612,0,4757 chr1 248814441 . C T 2282.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.320;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.08;ReadPosRankSum=-0.980;SOR=0.647 GT:AD:DP:GQ:PL 0/1:59,83:142:99:2311,0,1527 chr1 248814835 . A G 1059.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.538;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=2.536;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.56;ReadPosRankSum=0.983;SOR=0.340 GT:AD:DP:GQ:PL 0/1:26,38:64:99:1088,0,860 chr1 248816275 . A G 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=0.549;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,262 chr1 248816707 . G C 1674.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.827;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=0.666;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.73;ReadPosRankSum=1.230;SOR=0.765 GT:AD:DP:GQ:PL 0/1:62,60:122:99:1703,0,1858 chr1 248826485 . T G 2838.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.299;ClippingRankSum=0.000;DP=216;ExcessHet=3.0103;FS=1.066;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.14;ReadPosRankSum=-0.909;SOR=0.790 GT:AD:DP:GQ:PL 0/1:105,111:216:99:2867,0,2706 chr1 248826724 . G C 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=-0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:104,0,68 chr1 248838356 . G A 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=-0.180;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,4:7:87:112,0,87 chr1 248847655 . C A 2157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.213;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=0.725;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.73;ReadPosRankSum=2.111;SOR=0.588 GT:AD:DP:GQ:PL 0/1:62,67:129:99:2186,0,1987 chr1 248855287 . T C 706.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.175;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=2.593;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.19;ReadPosRankSum=-0.309;SOR=0.352 GT:AD:DP:GQ:PL 0/1:32,26:58:99:735,0,941 chr1 248914573 . C T 1928.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.327;ClippingRankSum=0.000;DP=164;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.76;ReadPosRankSum=-0.966;SOR=0.716 GT:AD:DP:GQ:PL 0/1:89,75:164:99:1957,0,2392 chr1 248916508 . G A 793.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.497;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.89;ReadPosRankSum=-0.724;SOR=0.693 GT:AD:DP:GQ:PL 0/1:12,26:38:99:822,0,341 chr1 248928486 . A G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr1 248930006 . G C 168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.085;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.75;ReadPosRankSum=-0.140;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,7:9:57:197,0,57 chr1 248945460 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.89;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr1 248945592 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.78;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 45895 . A G 3439.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.69;SOR=1.166 GT:AD:DP:GQ:PL 1/1:0,90:90:99:3468,271,0 chr2 92388 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 128345 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 191399 . C A 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr2 224919 . A G 522.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.288;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.68;ReadPosRankSum=-0.296;SOR=0.723 GT:AD:DP:GQ:PL 0/1:30,24:54:99:551,0,818 chr2 224970 . C T 459.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.135;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.22;ReadPosRankSum=-0.517;SOR=0.848 GT:AD:DP:GQ:PL 0/1:26,19:45:99:488,0,644 chr2 230912 . A C 395.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.018;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=1.412;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.99;ReadPosRankSum=-0.123;SOR=0.446 GT:AD:DP:GQ:PL 0/1:20,16:36:99:424,0,557 chr2 233416 . G A 539.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.794;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=0.530;SOR=0.997 GT:AD:DP:GQ:PL 0/1:12,16:28:99:568,0,413 chr2 235753 . T C 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.61;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr2 242605 . C A 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.674;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:65:110,0,65 chr2 242793 . G C 737.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.018;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.998;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.30;ReadPosRankSum=-0.030;SOR=0.979 GT:AD:DP:GQ:PL 0/1:30,30:60:99:766,0,875 chr2 262335 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 262553 . T C 1048.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.056;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=3.538;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.37;ReadPosRankSum=-0.206;SOR=0.328 GT:AD:DP:GQ:PL 0/1:33,40:73:99:1077,0,921 chr2 264019 . C A 872.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.803;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=3.120;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.87;ReadPosRankSum=0.316;SOR=0.326 GT:AD:DP:GQ:PL 0/1:25,30:55:99:901,0,777 chr2 264895 . G C 5016.77 PASS AC=2;AF=1.00;AN=2;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.77;SOR=2.139 GT:AD:DP:GQ:PL 1/1:0,140:140:99:5045,421,0 chr2 271797 . G A 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=-0.229;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,6:10:99:174,0,133 chr2 272203 . C T 5161.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.309;ClippingRankSum=0.000;DP=365;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.14;ReadPosRankSum=0.189;SOR=0.688 GT:AD:DP:GQ:PL 0/1:170,195:365:99:5190,0,4463 chr2 272840 . G A 278.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.193;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=2.291;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=-1.883;SOR=0.269 GT:AD:DP:GQ:PL 0/1:12,11:23:99:307,0,433 chr2 272926 . A G 935.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.389;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=1.987;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.48;ReadPosRankSum=0.759;SOR=0.972 GT:AD:DP:GQ:PL 0/1:40,35:75:99:964,0,1158 chr2 273070 . A G 4128.77 PASS AC=2;AF=1.00;AN=2;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.04;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,133:133:99:4157,399,0 chr2 277003 . A G 255.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.147;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=-1.091;SOR=0.382 GT:AD:DP:GQ:PL 0/1:23,10:33:99:284,0,790 chr2 282736 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 289261 . C G 49.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:77,6,0 chr2 339849 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 398766 . G A 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.92;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 409112 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 413701 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 413706 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 423661 . C A 45.98 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.49;ReadPosRankSum=1.150;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:13:74,0,13 chr2 423685 . A G 58.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:86,9,0 chr2 494786 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 497462 . C A 31.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.94;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:60,0,37 chr2 543981 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 594324 . C A 90.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:118,12,0 chr2 594366 . T A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 594559 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 601571 . T C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr2 601580 . T C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr2 609326 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 648758 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 656973 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 661048 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 673562 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 676177 . C G 5683.77 PASS AC=2;AF=1.00;AN=2;DP=175;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.67;SOR=1.596 GT:AD:DP:GQ:PL 1/1:0,174:174:99:5712,522,0 chr2 676457 . G C 4871.77 PASS AC=2;AF=1.00;AN=2;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.21;SOR=1.841 GT:AD:DP:GQ:PL 1/1:0,107:107:99:4900,335,0 chr2 677213 . G A 1730.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.30;SOR=2.448 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1759,146,0 chr2 679522 . A G 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr2 772567 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 776122 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 790109 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 821963 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 834197 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 849340 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 849353 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 859224 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 859278 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 862022 . A C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.10;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 862027 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.21;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 862880 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 871734 . G C 61.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:89,9,0 chr2 881800 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 888629 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 888640 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 888676 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 910281 . A G 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr2 910358 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.645;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.126;SOR=2.833 GT:AD:DP:GQ:PL 0/1:2,3:5:34:110,0,34 chr2 1019742 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 1057572 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 1077887 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 1077903 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 1078018 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 1078531 . C T 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr2 1078554 . G A 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr2 1082965 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 1083444 . G A 1678.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.99;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1707,114,0 chr2 1083446 . G A 1678.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.84;SOR=2.554 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1707,114,0 chr2 1083457 . A G 1429.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.77;SOR=1.880 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1458,135,0 chr2 1083634 . C T 1355.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.13;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1384,135,0 chr2 1083756 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.524;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 1098279 . G A 2145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.147;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=2.750;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=1.365;SOR=0.652 GT:AD:DP:GQ:PL 0/1:75,85:160:99:2174,0,1875 chr2 1148695 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 1148719 . T C 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr2 1148758 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 1148769 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 1148791 . T C 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr2 1148842 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 1150769 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 1150797 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 1150849 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 1150866 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 1150889 . G C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 1152890 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 1152892 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 1152898 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 1154117 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 1161085 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 1168166 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 1173070 . G A 2845.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.276;ClippingRankSum=0.000;DP=295;ExcessHet=3.0103;FS=4.732;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.65;ReadPosRankSum=-0.726;SOR=0.960 GT:AD:DP:GQ:PL 0/1:178,117:295:99:2874,0,4639 chr2 1173296 . T A 209.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.912;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=-0.539;SOR=0.368 GT:AD:DP:GQ:PL 0/1:11,7:18:99:238,0,393 chr2 1208926 . A G 181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.437;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.09;ReadPosRankSum=-1.695;SOR=0.693 GT:AD:DP:GQ:PL 0/1:14,6:20:99:210,0,789 chr2 1208929 . C G 181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.798;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.09;ReadPosRankSum=-1.612;SOR=0.693 GT:AD:DP:GQ:PL 0/1:14,6:20:99:210,0,789 chr2 1237820 . C T 2058.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.31;SOR=3.461 GT:AD:DP:GQ:PL 1/1:0,57:57:99:2087,170,0 chr2 1247106 . T C 712.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.227;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=3.524;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.28;ReadPosRankSum=-1.325;SOR=1.609 GT:AD:DP:GQ:PL 0/1:16,23:39:99:741,0,371 chr2 1293843 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 1302055 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 1311008 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 1316371 . C T 2058.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.332;ClippingRankSum=0.000;DP=203;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.14;ReadPosRankSum=0.893;SOR=0.704 GT:AD:DP:GQ:PL 0/1:116,87:203:99:2087,0,2982 chr2 1316528 . A G 841.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.191;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.03;ReadPosRankSum=0.762;SOR=0.871 GT:AD:DP:GQ:PL 0/1:32,24:56:99:870,0,1279 chr2 1316532 . C A 816.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.375;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.02;ReadPosRankSum=1.283;SOR=0.926 GT:AD:DP:GQ:PL 0/1:30,21:51:99:845,0,1304 chr2 1316533 . G C 780.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.512;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.62;ReadPosRankSum=1.160;SOR=0.972 GT:AD:DP:GQ:PL 0/1:29,21:50:99:809,0,1268 chr2 1356757 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 1356759 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 1414209 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr2 1414211 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr2 1414420 . C G 1173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.189;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=0.766;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.87;ReadPosRankSum=1.358;SOR=0.555 GT:AD:DP:GQ:PL 0/1:61,47:108:99:1202,0,1613 chr2 1419728 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 1422849 . A G 815.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.345;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.39;ReadPosRankSum=0.599;SOR=0.404 GT:AD:DP:GQ:PL 0/1:16,24:40:99:844,0,524 chr2 1423015 . G A 2963.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.373;ClippingRankSum=0.000;DP=282;ExcessHet=3.0103;FS=2.048;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.55;ReadPosRankSum=-0.442;SOR=0.573 GT:AD:DP:GQ:PL 0/1:164,117:281:99:2992,0,4595 chr2 1423335 . G A 257.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.02;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:286,21,0 chr2 1433391 . A C 570.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.255;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=0.188;SOR=0.756 GT:AD:DP:GQ:PL 0/1:23,19:42:99:599,0,742 chr2 1433638 . C T 516.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.202;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.97;ReadPosRankSum=-1.247;SOR=0.536 GT:AD:DP:GQ:PL 0/1:20,17:37:99:545,0,655 chr2 1436527 . A G 539.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.153;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.584;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.38;ReadPosRankSum=-0.221;SOR=1.179 GT:AD:DP:GQ:PL 0/1:33,19:52:99:568,0,1017 chr2 1437533 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 1438645 . C T 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.061;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.80;ReadPosRankSum=0.725;SOR=0.527 GT:AD:DP:GQ:PL 0/1:10,6:16:99:137,0,268 chr2 1438704 . T C 775.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.503;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.04;ReadPosRankSum=-0.664;SOR=0.846 GT:AD:DP:GQ:PL 0/1:17,26:43:99:804,0,347 chr2 1439163 . C T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 1441511 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 1441547 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 1441622 . G A 61.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:89,9,0 chr2 1453592 . A G 3805.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.98;SOR=2.100 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3834,336,0 chr2 1456034 . A G 1214.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.88;SOR=3.545 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1243,96,0 chr2 1456232 . G T 1782.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.074;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=0.623;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=-0.717;SOR=0.762 GT:AD:DP:GQ:PL 0/1:72,68:140:99:1811,0,1939 chr2 1456368 . A G 815.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.130;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=3.786;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.16;ReadPosRankSum=-2.424;SOR=1.297 GT:AD:DP:GQ:PL 0/1:36,26:62:99:844,0,1045 chr2 1456508 . G T 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.379;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.282;MLEAC=1;MLEAF=0.500;MQ=59.95;MQRankSum=-0.804;QD=13.49;ReadPosRankSum=-0.515;SOR=0.223 GT:AD:DP:GQ:PL 0/1:9,11:20:99:298,0,235 chr2 1456525 . C T 717.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.94;QD=25.09;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:51:746,51,0 chr2 1456597 . C A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.83;MQRankSum=-0.674;QD=13.13;ReadPosRankSum=1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,105 chr2 1456601 . A T 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.80;QD=31.27;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr2 1475785 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 1475794 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 1475798 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 1476904 . G C 397.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.445;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.91;ReadPosRankSum=0.482;SOR=0.622 GT:AD:DP:GQ:PL 0/1:13,12:25:99:426,0,419 chr2 1477383 . G T 2017.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.480;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.46;ReadPosRankSum=-1.387;SOR=0.713 GT:AD:DP:GQ:PL 0/1:88,74:162:99:2046,0,2514 chr2 1477459 . G C 976.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.450;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=1.073;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.568;SOR=0.447 GT:AD:DP:GQ:PL 0/1:45,32:77:99:1005,0,1403 chr2 1477720 . C T 95.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:123,9,0 chr2 1483613 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 1484896 . T C 357.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.708;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.17;ReadPosRankSum=0.063;SOR=0.776 GT:AD:DP:GQ:PL 0/1:26,13:39:99:386,0,928 chr2 1487609 . C A 251.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=-1.721;SOR=0.124 GT:AD:DP:GQ:PL 0/1:10,8:18:99:280,0,364 chr2 1487725 . T C 1934.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.227;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=2.885;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.63;ReadPosRankSum=0.322;SOR=1.025 GT:AD:DP:GQ:PL 0/1:76,66:142:99:1963,0,2315 chr2 1493670 . A G 2394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.109;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=1.496;MLEAC=1;MLEAF=0.500;MQ=59.99;MQRankSum=-0.945;QD=14.87;ReadPosRankSum=-0.617;SOR=0.887 GT:AD:DP:GQ:PL 0/1:77,84:161:99:2423,0,2312 chr2 1494031 . C T 2729.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.577;ClippingRankSum=0.000;DP=195;ExcessHet=3.0103;FS=2.643;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.00;ReadPosRankSum=-0.074;SOR=0.909 GT:AD:DP:GQ:PL 0/1:97,98:195:99:2758,0,2570 chr2 1495956 . C T 1081.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.128;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=13.124;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.03;ReadPosRankSum=2.323;SOR=3.660 GT:AD:DP:GQ:PL 0/1:29,31:60:99:1110,0,893 chr2 1496127 . C T 4002.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.532;ClippingRankSum=0.000;DP=349;ExcessHet=3.0103;FS=0.815;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.50;ReadPosRankSum=0.814;SOR=0.635 GT:AD:DP:GQ:PL 0/1:193,155:348:99:4031,0,4935 chr2 1496155 . A C 3901.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.362;ClippingRankSum=0.000;DP=356;ExcessHet=3.0103;FS=6.222;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.99;ReadPosRankSum=0.417;SOR=0.978 GT:AD:DP:GQ:PL 0/1:206,149:355:99:3930,0,5156 chr2 1496893 . C T 654.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.472;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.240;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.64;ReadPosRankSum=1.680;SOR=1.120 GT:AD:DP:GQ:PL 0/1:24,24:48:99:683,0,722 chr2 1516904 . T C 862.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.470;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.983;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.03;ReadPosRankSum=-1.722;SOR=0.845 GT:AD:DP:GQ:PL 0/1:53,33:86:99:891,0,1637 chr2 1521757 . A G 59.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:87,9,0 chr2 1521827 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 1540375 . A T 517.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.52;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,15:15:45:546,45,0 chr2 1540845 . G A 1453.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.452;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=1.411;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.01;ReadPosRankSum=-0.842;SOR=0.826 GT:AD:DP:GQ:PL 0/1:81,51:132:99:1482,0,2293 chr2 1542589 . G T 1582.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.559;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.56;ReadPosRankSum=-0.087;SOR=0.743 GT:AD:DP:GQ:PL 0/1:62,64:126:99:1611,0,1702 chr2 1542759 . C T 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=-0.366;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr2 1543962 . C G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 1550416 . T G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.31;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 1550418 . T G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 1550420 . C A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.35;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 1572829 . C T 32.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:60,6,0 chr2 1587465 . C T 71.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.191;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.52;ReadPosRankSum=0.473;SOR=0.693 GT:AD:DP:GQ:PL 0/1:7,4:11:99:100,0,191 chr2 1587721 . C T 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.648;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=-0.308;SOR=1.022 GT:AD:DP:GQ:PL 0/1:3,7:10:66:218,0,66 chr2 1601202 . A G 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr2 1614792 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 1614794 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 1617836 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 1619081 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 1633759 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 1633876 . T C 115.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.085;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.86;ReadPosRankSum=-0.712;SOR=0.223 GT:AD:DP:GQ:PL 0/1:4,5:9:99:144,0,140 chr2 1635288 . A G 1230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.548;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.86;ReadPosRankSum=1.058;SOR=0.663 GT:AD:DP:GQ:PL 0/1:18,41:59:99:1259,0,423 chr2 1635350 . T C 1569.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.214;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=5.492;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.02;ReadPosRankSum=0.449;SOR=0.302 GT:AD:DP:GQ:PL 0/1:38,60:98:99:1598,0,1027 chr2 1637090 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 1637095 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 1637196 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 1638597 . A C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 1638681 . T C 573.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.59;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:602,45,0 chr2 1638765 . T C 4021.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.35;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,86:86:99:4050,271,0 chr2 1638767 . C T 4219.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.89;SOR=4.712 GT:AD:DP:GQ:PL 1/1:0,90:90:99:4248,286,0 chr2 1638772 . C T 1813.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.706;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.32;ReadPosRankSum=-0.380;SOR=0.906 GT:AD:DP:GQ:PL 0/1:45,54:99:99:1842,0,1434 chr2 1638773 . C G 4396.77 PASS AC=2;AF=1.00;AN=2;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.03;SOR=4.659 GT:AD:DP:GQ:PL 1/1:0,99:99:99:4425,298,0 chr2 1643399 . T C 10614.77 PASS AC=2;AF=1.00;AN=2;DP=329;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.26;SOR=1.429 GT:AD:DP:GQ:PL 1/1:0,329:329:99:10643,987,0 chr2 1649050 . T G 4646.77 PASS AC=2;AF=1.00;AN=2;DP=134;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.68;SOR=1.239 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4675,403,0 chr2 1673994 . G A 388.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.47;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:417,30,0 chr2 1676140 . A G 96.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:125,15,0 chr2 1679854 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.52;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 1684319 . A C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=38.68;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 1692244 . G A 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.19;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 1694550 . C T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 1716770 . G A 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr2 1718179 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 1719836 . G T 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr2 1721608 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 1730552 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 1731294 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 1734528 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 1734635 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 1744221 . G A 1549.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.12;SOR=2.636 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1578,132,0 chr2 1744657 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 1744930 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 1756774 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 1766746 . G T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 1767139 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 1772989 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 1781887 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 1799777 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 1799833 . G A 203.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:24:232,24,0 chr2 1809285 . G T 7313.77 PASS AC=2;AF=1.00;AN=2;DP=213;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.34;SOR=2.291 GT:AD:DP:GQ:PL 1/1:0,213:213:99:7342,639,0 chr2 1822710 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 1825002 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 1849974 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 1851914 . C A 148.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.78;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:177,15,0 chr2 1886298 . C T 856.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.60;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,28:28:84:885,84,0 chr2 1922665 . G T 6910.77 PASS AC=2;AF=1.00;AN=2;DP=209;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.07;SOR=0.890 GT:AD:DP:GQ:PL 1/1:0,209:209:99:6939,626,0 chr2 2142530 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 2241714 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 2244682 . T C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr2 2244685 . A G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr2 2403228 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 2545117 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 2620439 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 2620491 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 2639453 . C A 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.253;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr2 2645700 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 2645740 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 2645758 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 2645761 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 2650193 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 2651763 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 2664789 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 2669565 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 2682807 . C T 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.842;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr2 2695350 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 2695426 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 2696587 . G A 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,159 chr2 2696619 . C T 203.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.345;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.64;ReadPosRankSum=-1.884;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,6:9:99:232,0,108 chr2 2696625 . T C 203.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.382;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.64;ReadPosRankSum=-1.884;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,6:9:99:232,0,108 chr2 2696627 . T C 203.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.637;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.64;ReadPosRankSum=-1.884;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,6:9:99:232,0,108 chr2 2696628 . T C 203.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.180;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.64;ReadPosRankSum=-1.884;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,6:9:99:232,0,108 chr2 2696629 . G A 203.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.180;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.64;ReadPosRankSum=-1.884;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,6:9:99:232,0,108 chr2 2696631 . G A 203.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.484;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=29.11;ReadPosRankSum=-1.465;SOR=1.022 GT:AD:DP:GQ:PL 0/1:3,4:7:99:232,0,108 chr2 2697185 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 2729334 . C T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 2740421 . A G 104.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:132,9,0 chr2 2740455 . C T 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr2 2768187 . G A 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 2769558 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 2795697 . T C 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=0.524;SOR=1.447 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr2 2845098 . G C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 2881155 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 2881318 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 2905614 . T C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 2905655 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 2905701 . T C 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 2923211 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 2932603 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 2933136 . G T 111.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:139,12,0 chr2 2936195 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 2936215 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 2936248 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 3009684 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 3042536 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 3043517 . A G 149.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.40;ReadPosRankSum=0.000;SOR=0.527 GT:AD:DP:GQ:PL 0/1:1,6:7:21:178,0,21 chr2 3043548 . C G 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=-0.253;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr2 3074802 . T G 38.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.319;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.85;ReadPosRankSum=0.414;SOR=1.034 GT:AD:DP:GQ:PL 0/1:5,3:8:67:67,0,117 chr2 3074833 . C T 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.524;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr2 3077976 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 3077984 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 3100557 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 3127324 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 3131077 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 3133686 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 3142960 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 3146987 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 3149267 . C A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 3151240 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 3151245 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 3155334 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 3165263 . A C 56.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=14.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:84,12,0 chr2 3173846 . C G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 3183927 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 3185942 . G T 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr2 3188656 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 3189027 . T C 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr2 3189269 . G A 2443.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.933;ClippingRankSum=0.000;DP=199;ExcessHet=3.0103;FS=4.353;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.28;ReadPosRankSum=-0.808;SOR=1.015 GT:AD:DP:GQ:PL 0/1:108,91:199:99:2472,0,3183 chr2 3192269 . A G 2256.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.01;SOR=5.247 GT:AD:DP:GQ:PL 1/1:0,57:57:99:2285,171,0 chr2 3193183 . C G 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr2 3194404 . C T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 3196620 . A C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 3197177 . C A 934.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.81;SOR=3.528 GT:AD:DP:GQ:PL 1/1:0,25:25:75:963,75,0 chr2 3200537 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 3200547 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 3208334 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 3208476 . G T 583.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.659;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=6.410;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.22;ReadPosRankSum=0.213;SOR=3.160 GT:AD:DP:GQ:PL 0/1:18,18:36:99:612,0,564 chr2 3208933 . C A 2430.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.332;ClippingRankSum=0.000;DP=181;ExcessHet=3.0103;FS=1.861;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=-1.043;SOR=0.535 GT:AD:DP:GQ:PL 0/1:88,93:181:99:2459,0,2446 chr2 3209046 . C T 1284.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.424;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=5.858;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.67;ReadPosRankSum=0.528;SOR=1.382 GT:AD:DP:GQ:PL 0/1:51,43:94:99:1313,0,1433 chr2 3210755 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 3214006 . A C 503.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.46;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:532,39,0 chr2 3214023 . T C 539.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.25;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:568,42,0 chr2 3214137 . G C 2042.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.49;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2071,200,0 chr2 3223672 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 3223768 . A C 47.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:75,6,0 chr2 3242529 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 3257051 . A G 184.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.799;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.80;ReadPosRankSum=0.908;SOR=1.402 GT:AD:DP:GQ:PL 0/1:4,7:11:99:213,0,122 chr2 3274023 . G A 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=0.712;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr2 3274113 . A G 172.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.262;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=2.098;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.09;ReadPosRankSum=1.146;SOR=0.223 GT:AD:DP:GQ:PL 0/1:12,7:19:99:201,0,376 chr2 3274176 . T A 678.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.348;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=1.309;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.40;ReadPosRankSum=0.270;SOR=1.106 GT:AD:DP:GQ:PL 0/1:16,23:39:99:707,0,471 chr2 3274665 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 3296851 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 3318699 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 3318784 . T C 338.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.93;ReadPosRankSum=0.310;SOR=1.061 GT:AD:DP:GQ:PL 0/1:7,10:17:99:367,0,241 chr2 3319026 . C A 637.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.468;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.81;ReadPosRankSum=-0.042;SOR=0.788 GT:AD:DP:GQ:PL 0/1:39,26:65:99:666,0,1072 chr2 3319134 . A G 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.020;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=-0.647;SOR=1.402 GT:AD:DP:GQ:PL 0/1:8,6:14:99:208,0,258 chr2 3319136 . A G 505.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.50;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:42:534,42,0 chr2 3337796 . T C 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 3338238 . T C 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=0.890;SOR=0.495 GT:AD:DP:GQ:PL 0/1:9,7:16:99:244,0,328 chr2 3349331 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 3353079 . T C 1009.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.31;SOR=6.518 GT:AD:DP:GQ:PL 1/1:0,25:25:75:1038,75,0 chr2 3353182 . A T 4361.77 PASS AC=2;AF=1.00;AN=2;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.08;SOR=1.422 GT:AD:DP:GQ:PL 1/1:0,145:145:99:4390,434,0 chr2 3353224 . G A 5422.77 PASS AC=2;AF=1.00;AN=2;DP=179;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.29;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,179:179:99:5451,537,0 chr2 3354349 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 3367970 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 3369214 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 3369223 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 3377418 . G A 1467.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.89;SOR=3.312 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1496,123,0 chr2 3388304 . T C 3034.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.791;ClippingRankSum=0.000;DP=211;ExcessHet=3.0103;FS=2.407;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.38;ReadPosRankSum=0.983;SOR=0.519 GT:AD:DP:GQ:PL 0/1:103,108:211:99:3063,0,2948 chr2 3388742 . T C 5819.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.188;ClippingRankSum=0.000;DP=339;ExcessHet=3.0103;FS=0.844;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.17;ReadPosRankSum=-0.058;SOR=0.765 GT:AD:DP:GQ:PL 0/1:185,154:339:99:5848,0,10427 chr2 3388743 . T A 5819.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.226;ClippingRankSum=0.000;DP=337;ExcessHet=3.0103;FS=0.849;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.27;ReadPosRankSum=-0.178;SOR=0.768 GT:AD:DP:GQ:PL 0/1:184,153:337:99:5848,0,10427 chr2 3389417 . T C 77.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=0.524;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:106,0,27 chr2 3389517 . A G 1057.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.361;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=5.537;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.60;ReadPosRankSum=0.751;SOR=0.077 GT:AD:DP:GQ:PL 0/1:16,27:43:99:1086,0,1087 chr2 3389518 . A C 1057.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.431;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=5.537;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.60;ReadPosRankSum=0.724;SOR=0.077 GT:AD:DP:GQ:PL 0/1:16,27:43:99:1086,0,1087 chr2 3421743 . G C 2245.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.356;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=0.682;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.68;ReadPosRankSum=-1.191;SOR=0.804 GT:AD:DP:GQ:PL 0/1:49,78:127:99:2274,0,1315 chr2 3422177 . T C 791.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.421;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.00;ReadPosRankSum=-0.581;SOR=0.693 GT:AD:DP:GQ:PL 0/1:38,28:66:99:820,0,1215 chr2 3424737 . T G 734.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.372;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.48;ReadPosRankSum=0.658;SOR=0.532 GT:AD:DP:GQ:PL 0/1:37,27:64:99:763,0,1137 chr2 3444056 . T G 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=-0.777;SOR=0.495 GT:AD:DP:GQ:PL 0/1:9,7:16:99:244,0,328 chr2 3450581 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 3465507 . C G 2892.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.44;SOR=2.247 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2921,252,0 chr2 3465692 . G C 1806.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.826;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=1.896;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.32;ReadPosRankSum=1.007;SOR=0.848 GT:AD:DP:GQ:PL 0/1:101,74:175:99:1835,0,2804 chr2 3465931 . A G 369.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.295;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.02;ReadPosRankSum=-0.158;SOR=0.601 GT:AD:DP:GQ:PL 0/1:24,17:41:99:398,0,628 chr2 3466344 . T C 8821.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.591;ClippingRankSum=0.000;DP=427;ExcessHet=3.0103;FS=0.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.66;ReadPosRankSum=0.230;SOR=0.763 GT:AD:DP:GQ:PL 0/1:201,226:427:99:8850,0,7682 chr2 3466353 . G A 8987.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.900;ClippingRankSum=0.000;DP=440;ExcessHet=3.0103;FS=0.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.43;ReadPosRankSum=0.145;SOR=0.731 GT:AD:DP:GQ:PL 0/1:207,233:440:99:9016,0,7776 chr2 3466415 . G C 5177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.325;ClippingRankSum=0.000;DP=386;ExcessHet=3.0103;FS=10.102;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=0.054;SOR=1.098 GT:AD:DP:GQ:PL 0/1:194,192:386:99:5206,0,5009 chr2 3466483 . T G 3010.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.410;ClippingRankSum=0.000;DP=234;ExcessHet=3.0103;FS=1.152;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.92;ReadPosRankSum=0.235;SOR=0.799 GT:AD:DP:GQ:PL 0/1:127,106:233:99:3039,0,3575 chr2 3469587 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 3477866 . T C 954.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.513;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.45;ReadPosRankSum=-0.185;SOR=0.643 GT:AD:DP:GQ:PL 0/1:36,35:71:99:983,0,916 chr2 3477888 . G A 913.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.463;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=0.896;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.87;ReadPosRankSum=0.219;SOR=0.869 GT:AD:DP:GQ:PL 0/1:36,35:71:99:942,0,938 chr2 3477945 . T C 765.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.713;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=3.589;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=0.559;SOR=1.209 GT:AD:DP:GQ:PL 0/1:33,31:64:99:794,0,811 chr2 3478821 . A T 1983.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.399;ClippingRankSum=0.000;DP=167;ExcessHet=3.0103;FS=0.592;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.88;ReadPosRankSum=-1.291;SOR=0.617 GT:AD:DP:GQ:PL 0/1:97,70:167:99:2012,0,2753 chr2 3478951 . C T 2440.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.186;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=5.932;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.79;ReadPosRankSum=-0.417;SOR=1.099 GT:AD:DP:GQ:PL 0/1:116,91:207:99:2469,0,3202 chr2 3479410 . C T 4581.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.546;ClippingRankSum=0.000;DP=363;ExcessHet=3.0103;FS=4.639;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.62;ReadPosRankSum=0.784;SOR=0.920 GT:AD:DP:GQ:PL 0/1:193,170:363:99:4610,0,4960 chr2 3479434 . C T 4328.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.245;ClippingRankSum=0.000;DP=338;ExcessHet=3.0103;FS=1.795;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.81;ReadPosRankSum=-1.015;SOR=0.806 GT:AD:DP:GQ:PL 0/1:173,165:338:99:4357,0,4650 chr2 3479619 . T G 852.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.384;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=1.219;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=0.316;SOR=0.476 GT:AD:DP:GQ:PL 0/1:37,30:67:99:881,0,1095 chr2 3484731 . A G 3526.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.936;ClippingRankSum=0.000;DP=301;ExcessHet=3.0103;FS=4.517;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.72;ReadPosRankSum=-2.141;SOR=0.933 GT:AD:DP:GQ:PL 0/1:162,139:301:99:3555,0,4462 chr2 3488858 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 3490530 . C A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 3490551 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 3490594 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 3490603 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.70;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 3490791 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 3499139 . G T 1671.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.485;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=1.726;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.92;ReadPosRankSum=-0.059;SOR=0.894 GT:AD:DP:GQ:PL 0/1:62,43:105:99:1700,0,3864 chr2 3499459 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 3500916 . A G 3228.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.446;ClippingRankSum=0.000;DP=300;ExcessHet=3.0103;FS=7.985;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.80;ReadPosRankSum=0.125;SOR=0.772 GT:AD:DP:GQ:PL 0/1:178,121:299:99:3257,0,4570 chr2 3501048 . A G 1651.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.588;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=3.615;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.24;ReadPosRankSum=1.026;SOR=0.412 GT:AD:DP:GQ:PL 0/1:85,62:147:99:1680,0,2527 chr2 3514872 . T C 248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.319;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=0.373;SOR=0.446 GT:AD:DP:GQ:PL 0/1:11,8:19:99:277,0,378 chr2 3519553 . A G 917.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.59;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:90:946,90,0 chr2 3519673 . C A 268.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.636;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=5.237;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.80;ReadPosRankSum=-1.655;SOR=1.727 GT:AD:DP:GQ:PL 0/1:5,11:16:99:297,0,127 chr2 3532170 . T C 2041.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.20;SOR=3.219 GT:AD:DP:GQ:PL 1/1:0,57:57:99:2070,171,0 chr2 3532554 . T C 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.93;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 3538028 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 3550384 . T C 1354.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.26;SOR=2.531 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1383,125,0 chr2 3552110 . G T 1921.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.57;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1950,177,0 chr2 3557878 . A G 2800.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.391;ClippingRankSum=0.000;DP=221;ExcessHet=3.0103;FS=18.484;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.79;ReadPosRankSum=1.613;SOR=0.567 GT:AD:DP:GQ:PL 0/1:116,103:219:99:2829,0,3081 chr2 3558846 . G C 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=-0.253;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr2 3575950 . A G 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.94;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:112,0,30 chr2 3577585 . T C 130.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.68;ReadPosRankSum=0.108;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:159,0,216 chr2 3577589 . C T 130.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.68;ReadPosRankSum=0.566;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:159,0,216 chr2 3580058 . G C 810.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.626;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=3.982;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.11;ReadPosRankSum=-0.027;SOR=0.962 GT:AD:DP:GQ:PL 0/1:67,33:100:99:839,0,1813 chr2 3605026 . G C 2972.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.437;ClippingRankSum=0.000;DP=238;ExcessHet=3.0103;FS=0.986;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.49;ReadPosRankSum=0.285;SOR=0.763 GT:AD:DP:GQ:PL 0/1:121,117:238:99:3001,0,2824 chr2 3605254 . C A 190.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.63;ReadPosRankSum=-0.773;SOR=1.402 GT:AD:DP:GQ:PL 0/1:8,6:14:99:219,0,533 chr2 3605274 . C T 118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.88;ReadPosRankSum=1.309;SOR=1.329 GT:AD:DP:GQ:PL 0/1:6,4:10:99:147,0,500 chr2 3605986 . A G 858.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.490;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=1.416;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.21;ReadPosRankSum=0.328;SOR=0.377 GT:AD:DP:GQ:PL 0/1:35,30:65:99:887,0,1162 chr2 3606254 . T C 1473.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.996;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=0.813;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.90;ReadPosRankSum=-0.514;SOR=0.798 GT:AD:DP:GQ:PL 0/1:51,55:106:99:1502,0,1451 chr2 3613162 . T C 1663.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.035;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=5.701;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.31;ReadPosRankSum=1.048;SOR=2.006 GT:AD:DP:GQ:PL 0/1:51,51:102:99:1692,0,1604 chr2 3613591 . T C 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.917;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=3.123;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.91;ReadPosRankSum=-0.056;SOR=2.030 GT:AD:DP:GQ:PL 0/1:8,5:13:99:170,0,261 chr2 3617548 . C T 1111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.831;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=9.934;MLEAC=1;MLEAF=0.500;MQ=57.26;MQRankSum=-4.800;QD=18.23;ReadPosRankSum=0.088;SOR=0.041 GT:AD:DP:GQ:PL 0/1:32,29:61:99:1140,0,2501 chr2 3617556 . T C 1204.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.701;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=16.427;MLEAC=1;MLEAF=0.500;MQ=57.55;MQRankSum=-4.636;QD=17.72;ReadPosRankSum=0.109;SOR=0.018 GT:AD:DP:GQ:PL 0/1:35,33:68:99:1233,0,2566 chr2 3617752 . T C 2025.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.848;ClippingRankSum=0.000;DP=170;ExcessHet=3.0103;FS=0.597;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.92;ReadPosRankSum=-0.061;SOR=0.800 GT:AD:DP:GQ:PL 0/1:85,85:170:99:2054,0,2178 chr2 3617855 . A C 295.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.484;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=2.741;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.86;ReadPosRankSum=0.000;SOR=1.942 GT:AD:DP:GQ:PL 0/1:20,10:30:99:324,0,587 chr2 3637269 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.94;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:68:68,0,71 chr2 3637322 . C T 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.812;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=0.545;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:256,0,160 chr2 3637456 . T C 965.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.006;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.22;ReadPosRankSum=-2.054;SOR=0.672 GT:AD:DP:GQ:PL 0/1:43,36:79:99:994,0,1190 chr2 3637484 . A G 1424.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.249;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=2.588;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.32;ReadPosRankSum=-1.548;SOR=0.443 GT:AD:DP:GQ:PL 0/1:52,55:107:99:1453,0,1340 chr2 3655451 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 3656369 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 3669408 . C T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:71,0,37 chr2 3671056 . G A 2611.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.995;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=14.990;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.20;ReadPosRankSum=-1.044;SOR=1.936 GT:AD:DP:GQ:PL 0/1:68,68:136:99:2640,0,3146 chr2 3671065 . A G 2738.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.107;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=9.802;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.38;ReadPosRankSum=-0.491;SOR=1.450 GT:AD:DP:GQ:PL 0/1:76,73:149:99:2767,0,3321 chr2 3671102 . C T 3361.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.355;ClippingRankSum=0.000;DP=228;ExcessHet=3.0103;FS=3.108;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.74;ReadPosRankSum=-1.358;SOR=0.910 GT:AD:DP:GQ:PL 0/1:108,120:228:99:3390,0,2777 chr2 3671395 . A G 826.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.670;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=6.734;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.37;ReadPosRankSum=0.848;SOR=2.712 GT:AD:DP:GQ:PL 0/1:21,24:45:99:855,0,674 chr2 3674139 . A G 332.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.589;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.84;ReadPosRankSum=1.208;SOR=0.824 GT:AD:DP:GQ:PL 0/1:41,16:57:99:361,0,1173 chr2 3674231 . A G 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.601;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=2.827;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.50;ReadPosRankSum=-0.219;SOR=0.296 GT:AD:DP:GQ:PL 0/1:33,15:48:99:244,0,927 chr2 3678493 . A C 5033.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.283;ClippingRankSum=0.000;DP=374;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.46;ReadPosRankSum=0.213;SOR=0.689 GT:AD:DP:GQ:PL 0/1:184,190:374:99:5062,0,4729 chr2 3701337 . C A 519.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.99;ReadPosRankSum=-0.151;SOR=0.330 GT:AD:DP:GQ:PL 0/1:11,15:26:99:548,0,381 chr2 3725410 . T G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 3726846 . C T 1374.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=3.556 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1403,116,0 chr2 3726929 . T C 3299.77 PASS AC=2;AF=1.00;AN=2;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.27;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,109:109:99:3328,327,0 chr2 3741793 . A C 273.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.22;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:302,24,0 chr2 3752793 . C T 1671.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.791;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=0.636;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.20;ReadPosRankSum=0.540;SOR=0.797 GT:AD:DP:GQ:PL 0/1:75,62:137:99:1700,0,2046 chr2 3752906 . C T 999.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.520;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.55;ReadPosRankSum=0.096;SOR=0.667 GT:AD:DP:GQ:PL 0/1:75,42:117:99:1028,0,1929 chr2 3767660 . A G 600.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.357;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.16;ReadPosRankSum=0.669;SOR=0.657 GT:AD:DP:GQ:PL 0/1:15,20:35:99:629,0,366 chr2 3784768 . T C 397.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.103;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.21;ReadPosRankSum=1.508;SOR=0.569 GT:AD:DP:GQ:PL 0/1:15,13:28:99:426,0,531 chr2 3788776 . G T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.13;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 3788789 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.02;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 3788792 . C T 95.03 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.319;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.76;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:12:123,0,12 chr2 3807430 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 3820943 . G C 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=-0.812;SOR=1.022 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,189 chr2 3826990 . G T 163.31 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.981;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=23.33;ReadPosRankSum=1.465;SOR=1.609 GT:AD:DP:GQ:PL 1/1:2,5:7:1:189,1,0 chr2 3827364 . C G 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,73 chr2 3846969 . G A 313.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:342,27,0 chr2 3847026 . T A 51.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.689;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=7.123;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.71;ReadPosRankSum=-0.277;SOR=3.244 GT:AD:DP:GQ:PL 0/1:7,4:11:80:80,0,268 chr2 3857003 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 3872037 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.11;ReadPosRankSum=0.000;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,4:7:70:78,0,70 chr2 3876016 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.79;ReadPosRankSum=0.967;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,4:6:66:81,0,66 chr2 3876049 . C G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 3909747 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 3931609 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 3947140 . A T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 3950211 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 4060793 . A G 111.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:140,15,0 chr2 4066280 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 4088117 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 4088390 . C T 896.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.433;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=1.898;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.96;ReadPosRankSum=2.130;SOR=0.482 GT:AD:DP:GQ:PL 0/1:39,36:75:99:925,0,995 chr2 4088554 . A G 362.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.119;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.99;ReadPosRankSum=0.221;SOR=0.495 GT:AD:DP:GQ:PL 0/1:18,15:33:99:391,0,549 chr2 4452439 . A T 42.74 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.86;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 4474118 . G A 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.97;ReadPosRankSum=0.000;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:29:105,0,29 chr2 4474137 . G A 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=-0.366;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:28:120,0,28 chr2 4528747 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 4530002 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 4530003 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 4814271 . T A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:81:81,0,115 chr2 4814272 . T C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:81:81,0,115 chr2 4861246 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 4861255 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 4884258 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 4930375 . G C 80.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0 chr2 5133916 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 5133917 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 5148107 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 5273229 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 5280920 . C G 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr2 5341591 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 5341681 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 5401541 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 5463534 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 5505247 . C T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=39.02;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 5517847 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 5673910 . T C 46.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=0.967;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:21:75,0,21 chr2 5678581 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 5940866 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 5940896 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 5973568 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 5974606 . G A 1147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.628;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=1.455;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.22;ReadPosRankSum=-0.300;SOR=1.061 GT:AD:DP:GQ:PL 0/1:27,36:63:99:1176,0,798 chr2 6303384 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 6458921 . T C 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr2 6496292 . G T 89.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.483;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.158;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.98;ReadPosRankSum=-1.533;SOR=0.828 GT:AD:DP:GQ:PL 0/1:10,5:15:99:118,0,270 chr2 6496615 . T C 1035.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.37;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1064,96,0 chr2 6496808 . C T 249.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.308;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.197;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.89;ReadPosRankSum=-0.311;SOR=1.445 GT:AD:DP:GQ:PL 0/1:12,9:21:99:278,0,331 chr2 6496842 . T C 177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.809;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=3.039;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.88;ReadPosRankSum=0.486;SOR=1.911 GT:AD:DP:GQ:PL 0/1:11,7:18:99:206,0,338 chr2 6506821 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 6524952 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 6650405 . A G 4078.77 PASS AC=2;AF=1.00;AN=2;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.12;SOR=0.954 GT:AD:DP:GQ:PL 1/1:0,127:127:99:4107,381,0 chr2 6788816 . A T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 6855433 . A G 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr2 6860988 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 6861690 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 6863748 . G A 780.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.58;SOR=4.712 GT:AD:DP:GQ:PL 1/1:0,21:21:63:809,63,0 chr2 6863771 . G A 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.59;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 6864938 . C T 3440.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.73;SOR=1.656 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3469,306,0 chr2 6865238 . A G 4458.77 PASS AC=2;AF=1.00;AN=2;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.04;SOR=1.521 GT:AD:DP:GQ:PL 1/1:0,131:131:99:4487,394,0 chr2 6865861 . C T 674.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.90;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,18:18:54:703,54,0 chr2 6877772 . A G 3643.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.13;SOR=1.274 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3672,330,0 chr2 6878750 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 6878948 . A G 1738.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.50;SOR=0.960 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1767,170,0 chr2 6887192 . T A 3345.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.14;SOR=2.030 GT:AD:DP:GQ:PL 1/1:0,98:98:99:3374,294,0 chr2 6910504 . C G 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.61;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 6920498 . C T 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr2 6926527 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 6936291 . T A 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.36;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 6996850 . C T 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.13;ReadPosRankSum=-0.385;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:95:95,0,107 chr2 6996936 . A G 1711.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.30;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1740,159,0 chr2 6997186 . G A 657.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.349;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.968;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.26;ReadPosRankSum=0.018;SOR=0.499 GT:AD:DP:GQ:PL 0/1:41,30:71:99:686,0,1215 chr2 7008322 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 7008456 . T C 74.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:72:103,0,72 chr2 7008464 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr2 7020329 . C T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.598;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:73:107,0,73 chr2 7020359 . C T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.566;SOR=0.446 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,133 chr2 7020945 . A G 766.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.292;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.329;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.20;ReadPosRankSum=0.000;SOR=0.973 GT:AD:DP:GQ:PL 0/1:29,25:54:99:795,0,878 chr2 7021455 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 7021515 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 7024199 . T C 463.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.80;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:492,33,0 chr2 7024447 . A G 2829.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.869;ClippingRankSum=0.000;DP=244;ExcessHet=3.0103;FS=0.466;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.60;ReadPosRankSum=0.869;SOR=0.732 GT:AD:DP:GQ:PL 0/1:133,111:244:99:2858,0,3459 chr2 7024615 . C G 829.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.791;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.78;ReadPosRankSum=-0.902;SOR=0.582 GT:AD:DP:GQ:PL 0/1:46,31:77:99:858,0,1333 chr2 7024681 . C G 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.076;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.77;ReadPosRankSum=-0.808;SOR=0.804 GT:AD:DP:GQ:PL 0/1:18,9:27:99:292,0,634 chr2 7024815 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 7039830 . C T 248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.347;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.95;ReadPosRankSum=-1.347;SOR=0.093 GT:AD:DP:GQ:PL 0/1:15,10:25:99:277,0,514 chr2 7042402 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 7042403 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 7067864 . C T 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.616;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=1.248;SOR=1.981 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,191 chr2 7067929 . C A 324.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.904;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.721;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=-0.894;SOR=1.204 GT:AD:DP:GQ:PL 0/1:12,13:25:99:353,0,290 chr2 7068193 . G T 708.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.569;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=3.357;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.42;ReadPosRankSum=0.402;SOR=1.186 GT:AD:DP:GQ:PL 0/1:39,29:68:99:737,0,1118 chr2 7068291 . T C 324.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.076;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.55;ReadPosRankSum=0.055;SOR=0.593 GT:AD:DP:GQ:PL 0/1:29,14:43:99:353,0,878 chr2 7089647 . G C 487.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.336;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.21;ReadPosRankSum=2.275;SOR=0.399 GT:AD:DP:GQ:PL 0/1:9,14:23:99:516,0,275 chr2 7089880 . A C 819.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.587;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=5.147;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.81;ReadPosRankSum=0.009;SOR=0.290 GT:AD:DP:GQ:PL 0/1:31,33:64:99:848,0,868 chr2 7089973 . G A 342.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.717;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=2.772;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.04;ReadPosRankSum=-0.746;SOR=2.147 GT:AD:DP:GQ:PL 0/1:7,11:18:99:371,0,170 chr2 7096307 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 7109447 . G A 510.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.689;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=3.018;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.64;ReadPosRankSum=-1.794;SOR=1.238 GT:AD:DP:GQ:PL 0/1:30,18:48:99:539,0,870 chr2 7246061 . T C 1185.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.382;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=1.758;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.51;ReadPosRankSum=1.766;SOR=0.951 GT:AD:DP:GQ:PL 0/1:60,43:103:99:1214,0,1667 chr2 7269966 . A G 239.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=29.98;ReadPosRankSum=-0.674;SOR=2.833 GT:AD:DP:GQ:PL 0/1:1,7:8:18:268,0,18 chr2 7281426 . C G 782.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.35;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:811,60,0 chr2 7400564 . C G 278.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.165;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.96;ReadPosRankSum=-0.785;SOR=1.002 GT:AD:DP:GQ:PL 0/1:17,11:28:99:307,0,512 chr2 7400653 . T C 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=-1.732;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,224 chr2 7526133 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 7721893 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 7736607 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 7869436 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 7924571 . C T 214.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.69;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:243,18,0 chr2 7951104 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 7968457 . G T 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.85;ReadPosRankSum=-1.068;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,2:8:59:59,0,227 chr2 7974753 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 7974754 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 8028569 . A T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.524;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,120 chr2 8028573 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.126;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,120 chr2 8028591 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 8038605 . A G 3452.77 PASS AC=2;AF=1.00;AN=2;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.27;SOR=0.750 GT:AD:DP:GQ:PL 1/1:0,107:107:99:3481,321,0 chr2 8038781 . G A 435.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.549;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=2.235;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.03;ReadPosRankSum=1.519;SOR=1.730 GT:AD:DP:GQ:PL 0/1:15,14:29:99:464,0,436 chr2 8225804 . C T 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=1.282;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr2 8247966 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 8326525 . A T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr2 8379758 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 8380037 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 8433858 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 8451695 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 8451896 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 8516588 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 8571215 . A T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 8583020 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 8588436 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 8588477 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.96;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 8588485 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.83;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 8588567 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 8589179 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 8589563 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 8603238 . T C 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-0.022;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr2 8623875 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 8641646 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 8651017 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 8651019 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 8678035 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 8682782 . A C 1023.73 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=0.132;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.25;ReadPosRankSum=0.694;SOR=0.473 GT:AD:DP:GQ:PL 1/1:3,36:39:62:1012,62,0 chr2 8693396 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 8693401 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 8730684 . A G 2222.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.89;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2251,189,0 chr2 8746412 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 8747421 . C A 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.80;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 8747780 . A T 836.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.18;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:865,63,0 chr2 8750049 . G A 1356.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.617;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=5.528;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=-2.428;SOR=1.447 GT:AD:DP:GQ:PL 0/1:43,44:87:99:1385,0,1260 chr2 8757959 . A T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.81;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 8762464 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 8770857 . A T 1980.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=2.119 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2009,183,0 chr2 8770880 . T C 1703.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.08;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1732,150,0 chr2 8776717 . A T 2714.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=0.698;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=34.80;ReadPosRankSum=1.047;SOR=1.584 GT:AD:DP:GQ:PL 1/1:1,77:78:99:2743,205,0 chr2 8803161 . G A 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.08;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 8806438 . G T 658.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.07;ReadPosRankSum=0.262;SOR=0.483 GT:AD:DP:GQ:PL 0/1:17,24:41:99:687,0,494 chr2 8858494 . A G 1637.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.12;SOR=1.067 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1666,144,0 chr2 8995879 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 9091583 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 9093982 . C T 58.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:86,6,0 chr2 9145077 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 9146830 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 9149472 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 9154575 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 9154598 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 9154611 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 9157453 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 9157461 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 9159570 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 9222789 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 9222856 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 9230334 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 9279282 . G A 856.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.859;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.74;ReadPosRankSum=-0.392;SOR=0.811 GT:AD:DP:GQ:PL 0/1:48,25:73:99:885,0,3041 chr2 9279286 . C T 972.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.294;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=2.150;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.47;ReadPosRankSum=-1.118;SOR=1.024 GT:AD:DP:GQ:PL 0/1:50,28:78:99:1001,0,3031 chr2 9279454 . G A 1928.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.584;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=1.778;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.30;ReadPosRankSum=0.160;SOR=0.942 GT:AD:DP:GQ:PL 0/1:41,54:95:99:1957,0,1962 chr2 9279479 . G A 1699.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.649;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=2.271;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.37;ReadPosRankSum=0.358;SOR=0.450 GT:AD:DP:GQ:PL 0/1:30,46:76:99:1728,0,1736 chr2 9280052 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr2 9280055 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr2 9323325 . C T 3411.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.45;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3440,306,0 chr2 9327676 . G C 194.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.728;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.48;ReadPosRankSum=0.105;SOR=0.569 GT:AD:DP:GQ:PL 0/1:3,7:10:92:223,0,92 chr2 9344413 . C T 647.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.16;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:51:676,51,0 chr2 9350888 . C T 1658.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.85;SOR=2.078 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1687,147,0 chr2 9356162 . T C 3113.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.939;ClippingRankSum=0.000;DP=221;ExcessHet=3.0103;FS=1.038;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=-0.441;SOR=0.616 GT:AD:DP:GQ:PL 0/1:98,123:221:99:3142,0,2573 chr2 9374788 . C T 961.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.888;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=9.298;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.05;ReadPosRankSum=0.351;SOR=0.211 GT:AD:DP:GQ:PL 0/1:47,40:87:99:990,0,1383 chr2 9387078 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 9407042 . G A 1650.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.512;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=1.480;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.21;ReadPosRankSum=-0.257;SOR=0.843 GT:AD:DP:GQ:PL 0/1:61,64:125:99:1679,0,1663 chr2 9407234 . C A 560.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.203;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=3.235;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.49;ReadPosRankSum=1.171;SOR=1.402 GT:AD:DP:GQ:PL 0/1:15,19:34:99:589,0,486 chr2 9408522 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 9412250 . C T 351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.691;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=1.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.75;ReadPosRankSum=1.094;SOR=0.327 GT:AD:DP:GQ:PL 0/1:11,10:21:99:380,0,294 chr2 9413946 . T G 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-0.842;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr2 9414126 . G A 337.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.047;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=2.865;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.24;ReadPosRankSum=-1.154;SOR=0.330 GT:AD:DP:GQ:PL 0/1:26,15:41:99:366,0,724 chr2 9414151 . A T 324.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.528;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.22;ReadPosRankSum=0.668;SOR=0.723 GT:AD:DP:GQ:PL 0/1:29,16:45:99:353,0,724 chr2 9414332 . C A 359.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.558;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.61;ReadPosRankSum=-0.185;SOR=0.569 GT:AD:DP:GQ:PL 0/1:15,16:31:99:388,0,431 chr2 9429843 . A T 1202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.690;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=0.753;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.84;ReadPosRankSum=-0.197;SOR=0.780 GT:AD:DP:GQ:PL 0/1:63,48:111:99:1231,0,1590 chr2 9430925 . C T 537.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.390;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=3.485;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.54;ReadPosRankSum=-0.621;SOR=2.059 GT:AD:DP:GQ:PL 0/1:13,16:29:99:566,0,410 chr2 9432759 . A T 68.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.447;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.64;ReadPosRankSum=-0.469;SOR=0.394 GT:AD:DP:GQ:PL 0/1:21,5:26:97:97,0,687 chr2 9432799 . C T 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.047;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.91;ReadPosRankSum=0.783;SOR=1.329 GT:AD:DP:GQ:PL 0/1:10,4:14:99:125,0,341 chr2 9436424 . T C 748.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.039;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=1.614;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.83;ReadPosRankSum=0.787;SOR=0.430 GT:AD:DP:GQ:PL 0/1:16,26:42:99:777,0,474 chr2 9440337 . C G 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.652;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr2 9441612 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 9443793 . A G 385.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.252;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=4.505;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.30;ReadPosRankSum=-0.078;SOR=2.160 GT:AD:DP:GQ:PL 0/1:17,12:29:99:414,0,452 chr2 9472772 . A C 394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.003;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.18;ReadPosRankSum=-1.291;SOR=0.560 GT:AD:DP:GQ:PL 0/1:14,12:26:99:423,0,495 chr2 9473160 . T C 376.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.93;ReadPosRankSum=-0.945;SOR=1.179 GT:AD:DP:GQ:PL 0/1:7,11:18:99:405,0,238 chr2 9475427 . T C 998.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.665;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=2.480;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.98;ReadPosRankSum=0.523;SOR=1.746 GT:AD:DP:GQ:PL 0/1:21,29:50:99:1027,0,645 chr2 9475906 . A G 499.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.785;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=2.390;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.15;ReadPosRankSum=0.062;SOR=0.230 GT:AD:DP:GQ:PL 0/1:21,17:38:99:528,0,717 chr2 9481554 . G A 463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.943;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.96;ReadPosRankSum=0.454;SOR=1.414 GT:AD:DP:GQ:PL 0/1:17,14:31:99:492,0,559 chr2 9484665 . T A 286.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.054;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.09;ReadPosRankSum=0.330;SOR=0.602 GT:AD:DP:GQ:PL 0/1:10,9:19:99:315,0,329 chr2 9490102 . C T 618.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.096;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.75;ReadPosRankSum=1.103;SOR=0.643 GT:AD:DP:GQ:PL 0/1:23,22:45:99:647,0,688 chr2 9491211 . T C 812.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.365;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.05;ReadPosRankSum=-0.328;SOR=0.715 GT:AD:DP:GQ:PL 0/1:21,33:54:99:841,0,544 chr2 9493008 . T G 799.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.304;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.66;ReadPosRankSum=1.195;SOR=0.663 GT:AD:DP:GQ:PL 0/1:19,29:48:99:828,0,479 chr2 9493971 . G A 122.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.56;ReadPosRankSum=-0.524;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:151,0,27 chr2 9494727 . A G 1014.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.720;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=2.334;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.81;ReadPosRankSum=0.650;SOR=0.661 GT:AD:DP:GQ:PL 0/1:84,46:130:99:1043,0,2125 chr2 9496956 . C G 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr2 9502349 . C T 133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.057;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.43;ReadPosRankSum=0.257;SOR=0.892 GT:AD:DP:GQ:PL 0/1:12,6:18:99:162,0,379 chr2 9502392 . C T 123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.221;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.38;ReadPosRankSum=-0.549;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:152,0,179 chr2 9509837 . A G 266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.52;ReadPosRankSum=2.458;SOR=1.179 GT:AD:DP:GQ:PL 0/1:5,8:13:99:295,0,170 chr2 9515479 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 9521055 . T C 229.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.020;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.41;ReadPosRankSum=-0.736;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,8:14:99:258,0,209 chr2 9521460 . C T 120.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.16;ReadPosRankSum=-1.282;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:149,0,27 chr2 9522281 . T C 784.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.847;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.53;ReadPosRankSum=-0.769;SOR=0.775 GT:AD:DP:GQ:PL 0/1:23,31:54:99:813,0,617 chr2 9555153 . C T 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=-1.611;SOR=2.303 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,151 chr2 9555777 . A G 309.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.934;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.65;ReadPosRankSum=-0.656;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,10:15:99:338,0,164 chr2 9587528 . C T 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.877;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=4.434;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.67;ReadPosRankSum=-1.182;SOR=1.802 GT:AD:DP:GQ:PL 0/1:17,5:22:99:109,0,405 chr2 9655253 . C T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 9661564 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 9661615 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 9661649 . T C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 9661650 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.38;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 9670335 . G T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 9675741 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 9675743 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 9704049 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 9716191 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 9716722 . G A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 9717954 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 9720695 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 9737403 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 9753641 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 9753647 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 9753648 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 9754448 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 9754506 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 9766079 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 9766171 . G A 94.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=-1.150;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:27:123,0,27 chr2 9766172 . A G 94.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=-1.150;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:27:123,0,27 chr2 9767881 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr2 9767904 . T C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr2 9812263 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 9812782 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 9843557 . G T 642.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.683;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=1.046;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.48;ReadPosRankSum=-0.243;SOR=0.525 GT:AD:DP:GQ:PL 0/1:31,25:56:99:671,0,922 chr2 9843587 . A C 1435.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.63;SOR=1.828 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1464,132,0 chr2 9845477 . T C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 9846033 . C T 381.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.954;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.60;ReadPosRankSum=0.286;SOR=0.368 GT:AD:DP:GQ:PL 0/1:9,14:23:99:410,0,273 chr2 9849313 . A G 794.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.109;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=5.952;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.74;ReadPosRankSum=0.881;SOR=0.972 GT:AD:DP:GQ:PL 0/1:40,34:74:99:823,0,1092 chr2 9851398 . A T 272.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.80;ReadPosRankSum=0.406;SOR=1.802 GT:AD:DP:GQ:PL 0/1:3,8:11:92:301,0,92 chr2 9851427 . G A 571.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.24;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,16:16:48:600,48,0 chr2 9851738 . G A 592.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.770;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=3.539;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.47;ReadPosRankSum=1.224;SOR=1.580 GT:AD:DP:GQ:PL 0/1:15,21:36:99:621,0,382 chr2 9854159 . C G 293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.464;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=-0.055;SOR=1.329 GT:AD:DP:GQ:PL 0/1:5,9:14:99:322,0,167 chr2 9868743 . A G 987.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.823;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=2.092;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.74;ReadPosRankSum=-1.948;SOR=0.980 GT:AD:DP:GQ:PL 0/1:32,35:67:99:1016,0,857 chr2 9869469 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 9869472 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 9875750 . A G 251.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=1.712;SOR=0.512 GT:AD:DP:GQ:PL 0/1:10,8:18:99:280,0,361 chr2 9882887 . T C 648.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.311;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.54;ReadPosRankSum=-0.182;SOR=0.643 GT:AD:DP:GQ:PL 0/1:13,22:35:99:677,0,370 chr2 9882976 . G T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 9892578 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 9903376 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 9903381 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 9904698 . G A 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.21;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 9904746 . A G 898.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.70;SOR=4.892 GT:AD:DP:GQ:PL 1/1:0,23:23:69:927,69,0 chr2 9904812 . G T 2442.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.45;SOR=1.758 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2471,195,0 chr2 9904817 . G T 711.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.454;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=2.181;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.32;ReadPosRankSum=0.207;SOR=1.045 GT:AD:DP:GQ:PL 0/1:40,29:69:99:740,0,1141 chr2 9904885 . C T 4524.77 PASS AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.80;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,104:104:99:4553,313,0 chr2 9904895 . G A 4607.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.93;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,106:106:99:4636,319,0 chr2 9905018 . A G 2016.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.06;SOR=1.727 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2045,182,0 chr2 9910818 . T C 4558.77 PASS AC=2;AF=1.00;AN=2;DP=153;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.80;SOR=0.875 GT:AD:DP:GQ:PL 1/1:0,153:153:99:4587,458,0 chr2 9910831 . A G 4120.77 PASS AC=2;AF=1.00;AN=2;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.43;SOR=1.054 GT:AD:DP:GQ:PL 1/1:0,140:140:99:4149,419,0 chr2 9910924 . G C 1693.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.04;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1722,137,0 chr2 9911032 . T C 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr2 9911663 . A G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.674;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:62:110,0,62 chr2 9913283 . C T 2627.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.53;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2656,267,0 chr2 9913481 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 9918717 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 9919416 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 9919491 . G C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.25;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 9919641 . G T 2627.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=1.795 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2656,237,0 chr2 9925940 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 9928829 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 9939709 . C T 79.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:107,9,0 chr2 9939723 . C T 66.98 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.74;ReadPosRankSum=1.150;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:13:95,0,13 chr2 9939797 . C T 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr2 9998799 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 10008997 . T A 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.79;ReadPosRankSum=-0.598;SOR=0.991 GT:AD:DP:GQ:PL 0/1:3,3:6:99:117,0,214 chr2 10048522 . A T 3844.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.757;ClippingRankSum=0.000;DP=315;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.21;ReadPosRankSum=-2.551;SOR=0.679 GT:AD:DP:GQ:PL 0/1:172,143:315:99:3873,0,4729 chr2 10071529 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 10071539 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 10080120 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 10085114 . C T 3842.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.99;SOR=2.049 GT:AD:DP:GQ:PL 1/1:0,124:124:99:3871,369,0 chr2 10123151 . C G 378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.112;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.94;ReadPosRankSum=-1.046;SOR=0.610 GT:AD:DP:GQ:PL 0/1:8,12:20:99:407,0,267 chr2 10126849 . T A 973.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.736;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=5.686;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.53;ReadPosRankSum=-1.300;SOR=1.808 GT:AD:DP:GQ:PL 0/1:36,31:67:99:1002,0,1083 chr2 10166973 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 10172892 . A G 48.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.19;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:77,0,30 chr2 10173992 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 10192368 . G T 253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.501;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.07;ReadPosRankSum=-0.084;SOR=1.402 GT:AD:DP:GQ:PL 0/1:4,7:11:99:282,0,233 chr2 10192377 . A G 253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.602;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.07;ReadPosRankSum=0.908;SOR=1.402 GT:AD:DP:GQ:PL 0/1:4,7:11:99:282,0,233 chr2 10192884 . G A 753.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=2.737 GT:AD:DP:GQ:PL 1/1:0,22:22:66:782,66,0 chr2 10196908 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 10198059 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 10228997 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 10229065 . T G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.645;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.674;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:110,0,34 chr2 10229104 . T C 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr2 10234901 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 10260298 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 10260306 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 10265870 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 10266914 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 10269860 . A G 141.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:170,18,0 chr2 10277128 . C T 32.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.55;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:35:61,0,35 chr2 10279307 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 10286099 . A G 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr2 10286197 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 10296272 . A G 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr2 10315161 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 10330162 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 10384654 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 10387036 . G A 36.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:64,6,0 chr2 10393587 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 10404282 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 10404326 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 10404376 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 10419549 . A T 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-0.342;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr2 10419598 . C T 126.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.265;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.05;ReadPosRankSum=-0.760;SOR=0.307 GT:AD:DP:GQ:PL 0/1:9,5:14:99:155,0,290 chr2 10434643 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 10445176 . T C 242.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.56;ReadPosRankSum=1.488;SOR=0.346 GT:AD:DP:GQ:PL 0/1:13,8:21:99:271,0,506 chr2 10445177 . T C 373.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.279;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.67;ReadPosRankSum=-0.746;SOR=1.022 GT:AD:DP:GQ:PL 0/1:8,11:19:99:402,0,303 chr2 10445238 . G A 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=-1.094;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,212 chr2 10446534 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 10446654 . T C 415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.101;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.63;ReadPosRankSum=0.360;SOR=0.610 GT:AD:DP:GQ:PL 0/1:13,12:25:99:444,0,844 chr2 10446664 . A G 412.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.225;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.88;ReadPosRankSum=0.242;SOR=0.527 GT:AD:DP:GQ:PL 0/1:14,12:26:99:441,0,883 chr2 10447043 . T A 531.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.174;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.70;ReadPosRankSum=1.401;SOR=0.760 GT:AD:DP:GQ:PL 0/1:10,17:27:99:560,0,300 chr2 10452895 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 10497808 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 10538412 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 10542119 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 10577680 . C T 819.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.806;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=7.496;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.38;ReadPosRankSum=-1.615;SOR=0.311 GT:AD:DP:GQ:PL 0/1:22,35:57:99:848,0,612 chr2 10588846 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:72,0,71 chr2 10602578 . G A 174.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.998;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.56;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:203,0,180 chr2 10634405 . C T 1382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.176;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=3.840;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.11;ReadPosRankSum=1.706;SOR=0.289 GT:AD:DP:GQ:PL 0/1:49,49:98:99:1411,0,1582 chr2 10667622 . C T 363.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.638;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=2.231;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=0.099;SOR=0.223 GT:AD:DP:GQ:PL 0/1:12,14:26:99:392,0,387 chr2 10673656 . T C 492.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.85;SOR=2.448 GT:AD:DP:GQ:PL 1/1:0,15:15:45:521,45,0 chr2 10704949 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 10704990 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 10706899 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 10713094 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 10739386 . G A 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr2 10740876 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 10759727 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 10761664 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 10768434 . G A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:64:71,0,64 chr2 10768767 . A G 4863.77 PASS AC=2;AF=1.00;AN=2;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.58;SOR=1.390 GT:AD:DP:GQ:PL 1/1:0,154:154:99:4892,461,0 chr2 10771765 . T C 7284.77 PASS AC=2;AF=1.00;AN=2;DP=225;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.52;SOR=1.928 GT:AD:DP:GQ:PL 1/1:0,224:224:99:7313,672,0 chr2 10772027 . T G 2188.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.007;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.23;ReadPosRankSum=0.519;SOR=0.632 GT:AD:DP:GQ:PL 0/1:58,69:127:99:2217,0,1787 chr2 10772322 . C A 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.000;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr2 10774894 . A G 1961.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.804;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=0.617;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=0.218;SOR=0.591 GT:AD:DP:GQ:PL 0/1:73,73:146:99:1990,0,2088 chr2 10774911 . C T 1956.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.229;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=2.056;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.05;ReadPosRankSum=0.248;SOR=0.513 GT:AD:DP:GQ:PL 0/1:77,73:150:99:1985,0,2136 chr2 10774964 . T A 2035.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.586;ClippingRankSum=0.000;DP=169;ExcessHet=3.0103;FS=0.567;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=1.149;SOR=0.616 GT:AD:DP:GQ:PL 0/1:80,89:169:99:2064,0,1854 chr2 10775323 . G A 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr2 10789191 . A G 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.489;SOR=1.270 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr2 10789216 . A G 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=0.674;SOR=0.148 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr2 10821058 . A G 931.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.379;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.897;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.83;ReadPosRankSum=1.015;SOR=0.527 GT:AD:DP:GQ:PL 0/1:49,37:86:99:960,0,1394 chr2 10837459 . C T 2296.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.396;ClippingRankSum=0.000;DP=187;ExcessHet=3.0103;FS=4.334;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.28;ReadPosRankSum=-0.629;SOR=1.004 GT:AD:DP:GQ:PL 0/1:96,91:187:99:2325,0,2550 chr2 10847933 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:72,0,71 chr2 10852354 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 10854292 . T C 1196.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.01;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1225,93,0 chr2 10854811 . C T 499.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.391;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=3.581;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.23;ReadPosRankSum=0.984;SOR=1.431 GT:AD:DP:GQ:PL 0/1:11,18:29:99:528,0,330 chr2 10874410 . T C 404.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.73;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,12:12:36:433,36,0 chr2 10874612 . G T 404.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.73;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,12:12:36:433,36,0 chr2 10878685 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 10878733 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 10883047 . A G 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr2 10912894 . A G 3585.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.749;ClippingRankSum=0.000;DP=232;ExcessHet=3.0103;FS=1.134;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.52;ReadPosRankSum=0.817;SOR=0.813 GT:AD:DP:GQ:PL 0/1:116,115:231:99:3614,0,3360 chr2 10913614 . C T 2137.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.569;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=4.359;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.94;ReadPosRankSum=-1.080;SOR=0.434 GT:AD:DP:GQ:PL 0/1:97,82:179:99:2166,0,2683 chr2 10920714 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 10932866 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 10934516 . A G 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr2 10956504 . A G 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 10960658 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 11013898 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 11021843 . G A 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=-0.524;SOR=1.447 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr2 11054925 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11055064 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11080705 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11102484 . C T 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr2 11105381 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 11105969 . G A 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.80;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 11106112 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11124318 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11124704 . G A 2428.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.82;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2457,222,0 chr2 11155741 . G C 546.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=3.005;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.02;ReadPosRankSum=-0.266;SOR=1.306 GT:AD:DP:GQ:PL 0/1:19,20:39:99:575,0,574 chr2 11160743 . T C 1569.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.638;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=0.638;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.68;ReadPosRankSum=-0.571;SOR=0.598 GT:AD:DP:GQ:PL 0/1:80,67:147:99:1598,0,2083 chr2 11193868 . T G 900.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.078;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.071;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.01;ReadPosRankSum=-1.318;SOR=0.953 GT:AD:DP:GQ:PL 0/1:26,34:60:99:929,0,667 chr2 11218905 . G T 280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.763;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=1.568;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.02;ReadPosRankSum=0.710;SOR=1.022 GT:AD:DP:GQ:PL 0/1:28,12:40:99:309,0,818 chr2 11257757 . T C 74.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.61;MQRankSum=-1.282;QD=12.46;ReadPosRankSum=-0.598;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:73:103,0,73 chr2 11294816 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 11370712 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 11370822 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11386353 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11390243 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 11417284 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11422543 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11422678 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11424555 . G A 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr2 11453370 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.75;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 11459679 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11488903 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 11514987 . C T 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=0.189;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,107 chr2 11523294 . C T 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr2 11540277 . C T 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.83;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 11540917 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11556570 . G C 1343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.330;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=-0.978;SOR=0.702 GT:AD:DP:GQ:PL 0/1:63,52:115:99:1372,0,1707 chr2 11562535 . A C 4964.77 PASS AC=2;AF=1.00;AN=2;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.24;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,154:154:99:4993,462,0 chr2 11568707 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11578465 . C T 2648.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.33;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2677,225,0 chr2 11597965 . T C 13611.77 PASS AC=2;AF=1.00;AN=2;DP=430;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.73;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,429:429:99:13640,1286,0 chr2 11598252 . A G 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr2 11598639 . C T 1157.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.71;SOR=3.545 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1186,96,0 chr2 11601067 . C A 1783.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.93;SOR=3.958 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1812,141,0 chr2 11601264 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11612509 . T C 8870.77 PASS AC=2;AF=1.00;AN=2;DP=291;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.59;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,290:290:99:8899,869,0 chr2 11612793 . G A 460.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.26;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:489,36,0 chr2 11615317 . T G 2591.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.99;SOR=2.770 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2620,213,0 chr2 11616303 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11616883 . A G 2326.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.73;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2355,201,0 chr2 11618390 . C G 1669.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.160;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=1.391;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.94;ReadPosRankSum=0.138;SOR=0.849 GT:AD:DP:GQ:PL 0/1:62,67:129:99:1698,0,1741 chr2 11621183 . T C 1588.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.42;SOR=2.448 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1617,146,0 chr2 11634198 . G A 6121.77 PASS AC=2;AF=1.00;AN=2;DP=183;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.45;SOR=0.704 GT:AD:DP:GQ:PL 1/1:0,183:183:99:6150,549,0 chr2 11635011 . C T 122.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.35;ReadPosRankSum=-1.803;SOR=0.330 GT:AD:DP:GQ:PL 0/1:3,5:8:99:151,0,101 chr2 11636663 . A G 84.98 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.150;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.24;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:13:113,0,13 chr2 11636698 . A C 49.31 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.44;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:1:75,0,1 chr2 11637631 . T C 442.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.45;ReadPosRankSum=1.028;SOR=0.859 GT:AD:DP:GQ:PL 0/1:11,13:24:99:471,0,387 chr2 11639036 . C G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.58;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 11669110 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 11669387 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 11669969 . G A 3033.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.12;SOR=2.162 GT:AD:DP:GQ:PL 1/1:0,81:81:99:3062,244,0 chr2 11675207 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 11677686 . G C 2622.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.20;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2651,237,0 chr2 11713648 . T C 289.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.806;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.10;ReadPosRankSum=0.435;SOR=0.387 GT:AD:DP:GQ:PL 0/1:7,11:18:99:318,0,207 chr2 11713787 . G A 1167.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.543;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=2.799;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.98;ReadPosRankSum=1.706;SOR=0.450 GT:AD:DP:GQ:PL 0/1:44,46:90:99:1196,0,1248 chr2 11713838 . G A 1396.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.927;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=2.465;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.70;ReadPosRankSum=-0.832;SOR=0.521 GT:AD:DP:GQ:PL 0/1:55,55:110:99:1425,0,1525 chr2 11713862 . A T 1526.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.419;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=2.440;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.75;ReadPosRankSum=-0.283;SOR=0.803 GT:AD:DP:GQ:PL 0/1:50,61:111:99:1555,0,1408 chr2 11713973 . T C 866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.379;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=2.164;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.38;ReadPosRankSum=-2.112;SOR=1.085 GT:AD:DP:GQ:PL 0/1:37,33:70:99:895,0,926 chr2 11750012 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 11767716 . C T 1984.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.471;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.38;ReadPosRankSum=0.875;SOR=0.695 GT:AD:DP:GQ:PL 0/1:69,69:138:99:2013,0,1911 chr2 11779867 . C T 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.97;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:63:63,0,148 chr2 11781928 . A G 115.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.748;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.52;ReadPosRankSum=0.230;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:144,0,218 chr2 11784824 . T C 4048.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.479;ClippingRankSum=0.000;DP=289;ExcessHet=3.0103;FS=2.612;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.01;ReadPosRankSum=1.030;SOR=0.872 GT:AD:DP:GQ:PL 0/1:129,160:289:99:4077,0,3425 chr2 11792047 . G T 611.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.846;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=3.830;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=3.042;SOR=0.186 GT:AD:DP:GQ:PL 0/1:22,23:45:99:640,0,707 chr2 11796672 . A G 1439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.671;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=6.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.14;ReadPosRankSum=1.221;SOR=1.664 GT:AD:DP:GQ:PL 0/1:37,47:84:99:1468,0,1156 chr2 11797032 . G C 553.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.736;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=4.030;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=-0.616;SOR=0.094 GT:AD:DP:GQ:PL 0/1:26,17:43:99:582,0,954 chr2 11838684 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11838706 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11906809 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 11955666 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11975180 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 11994220 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 12023674 . C G 305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.669;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=4.964;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.09;ReadPosRankSum=-0.869;SOR=2.494 GT:AD:DP:GQ:PL 0/1:8,11:19:99:334,0,175 chr2 12023994 . C T 85.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.554;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.29;ReadPosRankSum=-1.685;SOR=0.627 GT:AD:DP:GQ:PL 0/1:15,5:20:99:114,0,430 chr2 12024063 . C T 340.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.322;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=10.209;MLEAC=1;MLEAF=0.500;MQ=59.33;MQRankSum=-0.836;QD=14.20;ReadPosRankSum=-0.813;SOR=2.074 GT:AD:DP:GQ:PL 0/1:11,13:24:99:369,0,251 chr2 12024120 . C T 208.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.062;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=11.747;MLEAC=1;MLEAF=0.500;MQ=59.23;MQRankSum=-1.177;QD=9.94;ReadPosRankSum=0.792;SOR=2.800 GT:AD:DP:GQ:PL 0/1:13,8:21:99:237,0,363 chr2 12200100 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 12317658 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 12335386 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 12450534 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 12450541 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.98;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr2 12458897 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 12458917 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 12462270 . G C 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr2 12466720 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 12466724 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 12466725 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 12483201 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 12483228 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 12723644 . G A 417.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.585;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.89;ReadPosRankSum=-0.179;SOR=1.292 GT:AD:DP:GQ:PL 0/1:8,13:21:99:446,0,237 chr2 12737078 . C T 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-0.084;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr2 12737181 . C G 332.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.604;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=3.580;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.79;ReadPosRankSum=1.579;SOR=1.473 GT:AD:DP:GQ:PL 0/1:22,12:34:99:361,0,578 chr2 12809647 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 12827899 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 12965143 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 13055632 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 13520340 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 13583113 . A T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 13592483 . G C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.71;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 13592484 . A C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.70;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 13592559 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 14245141 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:31:75,0,31 chr2 14348276 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 14511057 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 14563395 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 14918330 . A T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 15128717 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 15133809 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 15178337 . G C 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.566;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr2 15232755 . A G 543.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.420;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=3.153;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.99;ReadPosRankSum=0.636;SOR=2.531 GT:AD:DP:GQ:PL 0/1:16,16:32:99:572,0,466 chr2 15275401 . C T 845.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.554;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.26;ReadPosRankSum=-0.872;SOR=0.346 GT:AD:DP:GQ:PL 0/1:42,27:69:99:874,0,1500 chr2 15277161 . T A 449.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.945;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.99;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,12:18:99:478,0,293 chr2 15287049 . C T 2178.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.124;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=5.788;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.79;ReadPosRankSum=-1.210;SOR=1.259 GT:AD:DP:GQ:PL 0/1:61,77:138:99:2207,0,1656 chr2 15287468 . G T 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=1.036;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 15308187 . A T 2505.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.835;ClippingRankSum=0.000;DP=183;ExcessHet=3.0103;FS=4.436;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.69;ReadPosRankSum=1.742;SOR=0.452 GT:AD:DP:GQ:PL 0/1:82,101:183:99:2534,0,2148 chr2 15330878 . C A 266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.52;ReadPosRankSum=0.654;SOR=1.179 GT:AD:DP:GQ:PL 0/1:5,8:13:99:295,0,170 chr2 15353757 . A G 751.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.719;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=3.948;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.39;ReadPosRankSum=-0.065;SOR=0.305 GT:AD:DP:GQ:PL 0/1:34,32:66:99:780,0,1116 chr2 15374858 . T C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 15379868 . G T 762.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.882;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.209;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.13;ReadPosRankSum=1.079;SOR=0.405 GT:AD:DP:GQ:PL 0/1:27,27:54:99:791,0,731 chr2 15380029 . T C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 15383142 . A T 1044.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.70;SOR=2.376 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1073,93,0 chr2 15383425 . T C 445.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.38;ReadPosRankSum=-0.804;SOR=0.963 GT:AD:DP:GQ:PL 0/1:10,13:23:99:474,0,348 chr2 15393565 . T C 265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.61;ReadPosRankSum=0.515;SOR=0.275 GT:AD:DP:GQ:PL 0/1:7,9:16:99:294,0,239 chr2 15393655 . G A 746.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.400;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=2.387;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.83;ReadPosRankSum=-2.906;SOR=0.375 GT:AD:DP:GQ:PL 0/1:23,31:54:99:775,0,548 chr2 15393760 . C A 942.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.041;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.43;ReadPosRankSum=0.029;SOR=0.662 GT:AD:DP:GQ:PL 0/1:18,26:44:99:971,0,1386 chr2 15393771 . A G 806.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.114;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.05;ReadPosRankSum=0.412;SOR=0.861 GT:AD:DP:GQ:PL 0/1:15,20:35:99:835,0,1321 chr2 15393775 . A G 793.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.35;ReadPosRankSum=-0.677;SOR=0.836 GT:AD:DP:GQ:PL 0/1:13,21:34:99:822,0,1160 chr2 15393874 . C T 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.75;ReadPosRankSum=-0.812;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:98:224,0,98 chr2 15394518 . G A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 15397517 . T C 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=0.712;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,154 chr2 15397602 . T C 271.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.813;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=4.775;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.30;ReadPosRankSum=-0.094;SOR=2.066 GT:AD:DP:GQ:PL 0/1:12,7:19:99:300,0,592 chr2 15397603 . T A 271.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.951;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=4.887;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:12,8:20:99:300,0,592 chr2 15397606 . A G 271.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.976;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=4.887;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=-0.305;SOR=2.303 GT:AD:DP:GQ:PL 0/1:12,8:20:99:300,0,592 chr2 15397739 . T C 439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.925;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=3.976;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.32;ReadPosRankSum=-0.144;SOR=1.981 GT:AD:DP:GQ:PL 0/1:12,12:24:99:468,0,542 chr2 15397742 . C A 439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.731;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=3.976;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.32;ReadPosRankSum=-0.863;SOR=1.981 GT:AD:DP:GQ:PL 0/1:12,12:24:99:468,0,542 chr2 15397791 . C T 112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.969;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=3.041;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.67;ReadPosRankSum=-0.524;SOR=2.215 GT:AD:DP:GQ:PL 0/1:9,4:13:99:141,0,592 chr2 15397800 . G C 115.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.58;ReadPosRankSum=-2.128;SOR=1.329 GT:AD:DP:GQ:PL 0/1:6,4:10:99:144,0,570 chr2 15397807 . G C 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.86;ReadPosRankSum=-1.732;SOR=1.022 GT:AD:DP:GQ:PL 0/1:6,3:9:99:108,0,530 chr2 15424594 . T C 181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=-0.908;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:210,0,214 chr2 15427525 . T C 459.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.048;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=6.067;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.89;ReadPosRankSum=-2.134;SOR=2.584 GT:AD:DP:GQ:PL 0/1:7,14:21:99:488,0,161 chr2 15461317 . C T 1253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.617;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=0.751;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.29;ReadPosRankSum=-1.155;SOR=0.807 GT:AD:DP:GQ:PL 0/1:53,49:102:99:1282,0,1363 chr2 15461450 . C T 335.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.230;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.65;ReadPosRankSum=0.265;SOR=0.269 GT:AD:DP:GQ:PL 0/1:8,10:18:99:364,0,268 chr2 15467718 . T C 435.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.592;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.78;ReadPosRankSum=0.520;SOR=0.736 GT:AD:DP:GQ:PL 0/1:35,21:56:99:464,0,831 chr2 15467889 . C A 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=-0.136;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,262 chr2 15473554 . T C 352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.020;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.38;ReadPosRankSum=0.353;SOR=0.576 GT:AD:DP:GQ:PL 0/1:20,14:34:99:381,0,582 chr2 15473591 . G A 160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.132;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.99;ReadPosRankSum=1.253;SOR=0.399 GT:AD:DP:GQ:PL 0/1:16,7:23:99:189,0,531 chr2 15473870 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 15474280 . T C 1372.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.098;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.59;ReadPosRankSum=0.377;SOR=0.704 GT:AD:DP:GQ:PL 0/1:57,52:109:99:1401,0,1458 chr2 15475786 . A G 1266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.297;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=0.662;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.82;ReadPosRankSum=-0.541;SOR=0.578 GT:AD:DP:GQ:PL 0/1:74,55:129:99:1295,0,1920 chr2 15475889 . C G 854.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.698;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.18;ReadPosRankSum=-0.668;SOR=0.723 GT:AD:DP:GQ:PL 0/1:51,33:84:99:883,0,1351 chr2 15475906 . C T 749.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.371;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.61;ReadPosRankSum=-0.469;SOR=0.687 GT:AD:DP:GQ:PL 0/1:48,30:78:99:778,0,1342 chr2 15478215 . G A 472.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.355;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=1.342;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=1.418;SOR=0.399 GT:AD:DP:GQ:PL 0/1:20,18:38:99:501,0,551 chr2 15483094 . G T 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr2 15494280 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 15494283 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 15503983 . C A 724.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.320;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.65;ReadPosRankSum=-1.133;SOR=1.112 GT:AD:DP:GQ:PL 0/1:13,19:32:99:753,0,1055 chr2 15503987 . C T 750.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.808;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.45;ReadPosRankSum=0.000;SOR=1.002 GT:AD:DP:GQ:PL 0/1:15,20:35:99:779,0,1052 chr2 15504277 . C T 661.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.146;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=9.523;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.08;ReadPosRankSum=-1.104;SOR=2.584 GT:AD:DP:GQ:PL 0/1:26,21:47:99:690,0,738 chr2 15534562 . T C 1570.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.190;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.14;ReadPosRankSum=-0.961;SOR=0.724 GT:AD:DP:GQ:PL 0/1:73,68:141:99:1599,0,2006 chr2 15536562 . G A 825.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.062;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.413;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.35;ReadPosRankSum=1.073;SOR=0.377 GT:AD:DP:GQ:PL 0/1:15,30:45:99:854,0,393 chr2 15538244 . C T 82.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.28;ReadPosRankSum=0.732;SOR=0.250 GT:AD:DP:GQ:PL 0/1:5,5:10:99:111,0,145 chr2 15538358 . T C 349.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.868;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=8.873;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=0.490;SOR=2.419 GT:AD:DP:GQ:PL 0/1:16,13:29:99:378,0,399 chr2 15539485 . A T 137.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.464;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.84;ReadPosRankSum=-0.897;SOR=0.307 GT:AD:DP:GQ:PL 0/1:9,5:14:99:166,0,322 chr2 15551667 . G T 600.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.140;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=2.101;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.39;ReadPosRankSum=1.602;SOR=0.465 GT:AD:DP:GQ:PL 0/1:37,27:64:99:629,0,985 chr2 15551762 . G A 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=-0.199;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:173,0,251 chr2 15586670 . A T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,93 chr2 15591735 . A C 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=0.366;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr2 15591874 . A G 634.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.127;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.54;ReadPosRankSum=0.364;SOR=0.623 GT:AD:DP:GQ:PL 0/1:30,25:55:99:663,0,904 chr2 15595295 . G A 1004.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.471;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=1.329;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.00;ReadPosRankSum=1.066;SOR=1.041 GT:AD:DP:GQ:PL 0/1:35,32:67:99:1033,0,1109 chr2 15597574 . G A 387.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.70;ReadPosRankSum=0.195;SOR=2.303 GT:AD:DP:GQ:PL 0/1:3,11:14:83:416,0,83 chr2 15603594 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 15607269 . C T 1118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.878;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=1.661;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=-0.093;SOR=0.890 GT:AD:DP:GQ:PL 0/1:49,47:96:99:1147,0,1281 chr2 15628752 . G A 966.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.546;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=2.002;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.81;ReadPosRankSum=0.712;SOR=1.045 GT:AD:DP:GQ:PL 0/1:33,37:70:99:995,0,818 chr2 15628857 . C G 506.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.162;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.75;ReadPosRankSum=-1.536;SOR=0.540 GT:AD:DP:GQ:PL 0/1:29,23:52:99:535,0,802 chr2 15630326 . A C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 15650908 . T C 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.967;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 15680139 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 15680149 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 15680186 . C T 141.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=27.24;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:169,12,0 chr2 15680188 . T C 141.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:169,12,0 chr2 15680265 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 15680277 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 15693314 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 15700381 . C A 927.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.344;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=1.618;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.67;ReadPosRankSum=0.111;SOR=0.726 GT:AD:DP:GQ:PL 0/1:69,38:107:99:956,0,1843 chr2 15700398 . G T 1060.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.251;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=2.602;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=-0.257;SOR=0.678 GT:AD:DP:GQ:PL 0/1:67,38:105:99:1089,0,1790 chr2 15700521 . T C 960.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.512;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=12.282;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=0.909;SOR=0.151 GT:AD:DP:GQ:PL 0/1:41,40:81:99:989,0,1125 chr2 15700658 . G A 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.41;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 15701106 . T A 198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.553;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=7.225;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.94;ReadPosRankSum=-0.652;SOR=0.048 GT:AD:DP:GQ:PL 0/1:11,9:20:99:227,0,362 chr2 15701164 . G A 569.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.225;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.66;ReadPosRankSum=-0.330;SOR=0.882 GT:AD:DP:GQ:PL 0/1:25,20:45:99:598,0,705 chr2 15705281 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 15706639 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 15706663 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 15725896 . C G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 15745330 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 15768027 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 15807447 . C G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.71;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 15811816 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.19;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 15818161 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 15843738 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 15846304 . T A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 15846338 . C G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr2 15846342 . A G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr2 15914845 . A G 49.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:77,6,0 chr2 16005304 . C G 65.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:93,9,0 chr2 16016106 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 16047803 . A T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 16053587 . A T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 16075413 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 16081844 . A G 88.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:116,12,0 chr2 16081894 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 16095642 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 16100913 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 16100959 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 16102722 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 16125854 . A G 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:71:123,0,71 chr2 16125864 . T C 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:71:123,0,71 chr2 16125957 . C T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 16158798 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 16223038 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 16228615 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 16276744 . G T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 16280054 . C G 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=0.000;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:28:120,0,28 chr2 16354843 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 16389440 . G A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 16389645 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 16506696 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 16506698 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 16562185 . A C 1096.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.163;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.770;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.19;ReadPosRankSum=-0.077;SOR=0.584 GT:AD:DP:GQ:PL 0/1:52,46:98:99:1125,0,1522 chr2 16600088 . A T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 16617491 . T C 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.92;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:70,0,33 chr2 16665319 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 16746465 . A G 237.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:266,24,0 chr2 16884816 . A T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 16984083 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 17251781 . T C 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr2 17284240 . A G 196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.586;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.89;ReadPosRankSum=-1.248;SOR=1.402 GT:AD:DP:GQ:PL 0/1:4,7:11:99:225,0,100 chr2 17284745 . T C 3573.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.49;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3602,330,0 chr2 17284808 . A G 3053.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.70;SOR=1.382 GT:AD:DP:GQ:PL 1/1:0,88:88:99:3082,264,0 chr2 17285037 . C G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.05;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 17285044 . T G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.06;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 17340024 . T C 328.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.89;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:33:357,33,0 chr2 17340103 . G A 279.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:27:308,27,0 chr2 17515306 . C T 2394.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.93;SOR=0.774 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2423,225,0 chr2 17517411 . A G 1600.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.20;SOR=1.154 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1629,135,0 chr2 17592257 . G A 2667.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.20;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2696,234,0 chr2 17665325 . A T 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.799;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.48;ReadPosRankSum=-0.431;SOR=1.445 GT:AD:DP:GQ:PL 0/1:4,8:12:99:286,0,99 chr2 17714708 . C T 35.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.732;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.97;ReadPosRankSum=-0.566;SOR=0.045 GT:AD:DP:GQ:PL 0/1:6,3:9:64:64,0,224 chr2 17731999 . A C 1174.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.50;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1203,99,0 chr2 17745792 . T C 182.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.06;ReadPosRankSum=-0.664;SOR=0.569 GT:AD:DP:GQ:PL 0/1:7,6:13:99:211,0,253 chr2 17746008 . C T 194.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.64;ReadPosRankSum=-0.447;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:98:223,0,98 chr2 17760156 . T G 597.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.523;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=15.347;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.23;ReadPosRankSum=-1.397;SOR=3.912 GT:AD:DP:GQ:PL 0/1:24,18:42:99:626,0,672 chr2 17761508 . T A 686.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.727;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.882;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.92;ReadPosRankSum=-0.877;SOR=0.791 GT:AD:DP:GQ:PL 0/1:47,30:77:99:715,0,1187 chr2 17772760 . G A 1584.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.07;SOR=1.702 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1613,153,0 chr2 17772873 . A G 229.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.020;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.41;ReadPosRankSum=0.736;SOR=0.593 GT:AD:DP:GQ:PL 0/1:6,8:14:99:258,0,208 chr2 17773154 . C G 490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.350;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=-0.750;SOR=0.583 GT:AD:DP:GQ:PL 0/1:30,21:51:99:519,0,828 chr2 17773380 . T G 157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.78;ReadPosRankSum=-0.084;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,6:10:99:186,0,103 chr2 17774427 . G A 239.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.818;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=11.212;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.66;ReadPosRankSum=2.113;SOR=3.338 GT:AD:DP:GQ:PL 0/1:26,10:36:99:268,0,739 chr2 17781183 . A G 910.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.256;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=3.468;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=-2.785;SOR=0.352 GT:AD:DP:GQ:PL 0/1:31,32:63:99:939,0,935 chr2 17781251 . C T 961.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.448;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=15.365;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.57;ReadPosRankSum=1.874;SOR=1.586 GT:AD:DP:GQ:PL 0/1:34,32:66:99:990,0,883 chr2 17849106 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 17851291 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 17853441 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 17853474 . A C 111.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:139,12,0 chr2 17857579 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 17896987 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 17916523 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 17916578 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 17931206 . G A 8358.77 PASS AC=2;AF=1.00;AN=2;DP=260;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.27;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,259:259:99:8387,774,0 chr2 17932356 . A G 5527.77 PASS AC=2;AF=1.00;AN=2;DP=165;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.50;SOR=0.978 GT:AD:DP:GQ:PL 1/1:0,165:165:99:5556,496,0 chr2 17932522 . G A 721.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.490;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=4.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.60;ReadPosRankSum=0.260;SOR=1.755 GT:AD:DP:GQ:PL 0/1:19,22:41:99:750,0,568 chr2 18100471 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 18153630 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 18153754 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 18206514 . G T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 18206573 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 18281386 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 19078027 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 19106311 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 19137088 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 19169524 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 19169557 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 19204666 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 19213199 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 19352628 . T C 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=1.221;SOR=0.160 GT:AD:DP:GQ:PL 0/1:5,5:10:99:167,0,179 chr2 19458056 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 19458161 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 19653970 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 19655174 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 19678354 . G A 61.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:89,9,0 chr2 19678375 . A G 36.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:64,6,0 chr2 19678433 . C A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 19685978 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 19726200 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 19774312 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 19864576 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 19864749 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 19898113 . T C 534.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.063;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=-0.075;SOR=0.704 GT:AD:DP:GQ:PL 0/1:23,19:42:99:563,0,709 chr2 19901602 . G A 926.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.924;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.82;ReadPosRankSum=-1.122;SOR=0.239 GT:AD:DP:GQ:PL 0/1:25,27:52:99:955,0,887 chr2 19901726 . G A 3015.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.024;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=2.272;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.94;ReadPosRankSum=0.784;SOR=0.885 GT:AD:DP:GQ:PL 0/1:114,119:233:99:3044,0,2896 chr2 19902071 . C G 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.070;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=-1.123;SOR=0.293 GT:AD:DP:GQ:PL 0/1:8,8:16:99:218,0,286 chr2 19926962 . G A 61.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.049;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.63;ReadPosRankSum=0.369;SOR=0.693 GT:AD:DP:GQ:PL 0/1:12,5:17:90:90,0,348 chr2 19928450 . T G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr2 19928451 . G T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr2 19931318 . T C 524.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.873;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.93;ReadPosRankSum=0.702;SOR=0.693 GT:AD:DP:GQ:PL 0/1:26,22:48:99:553,0,737 chr2 19931423 . C A 884.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.77;SOR=2.387 GT:AD:DP:GQ:PL 1/1:0,27:27:81:913,81,0 chr2 19933585 . C T 700.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.229;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=2.390;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.44;ReadPosRankSum=0.486;SOR=1.584 GT:AD:DP:GQ:PL 0/1:17,21:38:99:729,0,513 chr2 19935522 . T C 796.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.994;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=1.702;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.48;ReadPosRankSum=-0.315;SOR=0.882 GT:AD:DP:GQ:PL 0/1:59,35:94:99:825,0,1474 chr2 19960701 . T C 282.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.496;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=7.877;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.78;ReadPosRankSum=0.292;SOR=0.039 GT:AD:DP:GQ:PL 0/1:14,10:24:99:311,0,488 chr2 19962091 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 19973494 . A C 601.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.250;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=6.887;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=-0.479;SOR=2.211 GT:AD:DP:GQ:PL 0/1:24,19:43:99:630,0,703 chr2 19989328 . C T 1114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.057;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=2.832;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.13;ReadPosRankSum=1.574;SOR=0.995 GT:AD:DP:GQ:PL 0/1:69,41:110:99:1143,0,2020 chr2 19992935 . G A 449.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.49;ReadPosRankSum=1.164;SOR=1.402 GT:AD:DP:GQ:PL 0/1:7,13:20:99:478,0,232 chr2 19994065 . A G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 19994275 . G C 1532.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.420;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=0.664;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.88;ReadPosRankSum=0.898;SOR=0.622 GT:AD:DP:GQ:PL 0/1:66,63:129:99:1561,0,1792 chr2 20002977 . T C 355.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=3.565;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.23;ReadPosRankSum=0.030;SOR=0.126 GT:AD:DP:GQ:PL 0/1:14,11:25:99:384,0,510 chr2 20005919 . C T 6760.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.527;ClippingRankSum=0.000;DP=500;ExcessHet=3.0103;FS=0.527;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.58;ReadPosRankSum=-0.062;SOR=0.619 GT:AD:DP:GQ:PL 0/1:243,255:498:99:6789,0,6373 chr2 20006087 . G A 5939.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.042;ClippingRankSum=0.000;DP=457;ExcessHet=3.0103;FS=1.105;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.00;ReadPosRankSum=0.139;SOR=0.804 GT:AD:DP:GQ:PL 0/1:237,220:457:99:5968,0,6766 chr2 20021318 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 20033374 . T C 316.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=3.802;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.20;ReadPosRankSum=0.034;SOR=0.105 GT:AD:DP:GQ:PL 0/1:14,10:24:99:345,0,508 chr2 20034168 . C T 135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.142;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.05;ReadPosRankSum=1.650;SOR=1.609 GT:AD:DP:GQ:PL 0/1:10,5:15:99:164,0,338 chr2 20034762 . C T 1034.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.84;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1063,84,0 chr2 20036156 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 20120686 . C T 54.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.48;ReadPosRankSum=-0.755;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,3:10:83:83,0,262 chr2 20120732 . G A 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.729;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.66;ReadPosRankSum=1.247;SOR=0.136 GT:AD:DP:GQ:PL 0/1:20,7:27:99:208,0,859 chr2 20147013 . T G 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,73 chr2 20173611 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 20184622 . G A 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr2 20184791 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 20199070 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 20200795 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 20202619 . C G 371.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.011;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=6.576;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.87;ReadPosRankSum=-0.690;SOR=0.044 GT:AD:DP:GQ:PL 0/1:12,13:25:99:400,0,426 chr2 20204033 . A T 3384.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.85;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3413,299,0 chr2 20205142 . G A 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.87;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 20205289 . A C 3403.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.30;SOR=2.478 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3432,291,0 chr2 20209794 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 20211767 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.83;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 20212800 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 20223393 . A G 1900.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.07;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1929,162,0 chr2 20224894 . G A 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.17;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr2 20247880 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 20259008 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 20307751 . T C 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.48;ReadPosRankSum=-0.282;SOR=1.445 GT:AD:DP:GQ:PL 0/1:4,8:12:99:298,0,131 chr2 20336294 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 20391068 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 20424427 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 20478453 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 20489382 . T C 136.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:164,12,0 chr2 20499907 . C G 2381.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.35;SOR=3.223 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2410,189,0 chr2 20501140 . A G 5887.77 PASS AC=2;AF=1.00;AN=2;DP=189;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.32;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,188:188:99:5916,564,0 chr2 20501410 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.03;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 20501424 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.07;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 20501432 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.07;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 20513037 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 20529986 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.16;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 20541908 . T C 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 20558843 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 20560391 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 20563124 . T A 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.85;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 20563152 . T C 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.70;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 20564151 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 20565210 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 20577528 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 20590593 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 20601688 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 20617192 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 20618433 . G A 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr2 20618526 . A C 962.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=2.753 GT:AD:DP:GQ:PL 1/1:0,27:27:81:991,81,0 chr2 20618694 . T A 3314.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.86;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,82:82:99:3343,247,0 chr2 20618698 . G A 1473.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.588;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.34;ReadPosRankSum=0.683;SOR=0.704 GT:AD:DP:GQ:PL 0/1:31,54:85:99:1502,0,801 chr2 20618757 . T C 1074.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.693;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=3.682;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.68;ReadPosRankSum=-1.711;SOR=1.114 GT:AD:DP:GQ:PL 0/1:71,40:111:99:1103,0,1759 chr2 20622458 . T C 1274.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.45;SOR=2.242 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1303,111,0 chr2 20623852 . A G 1086.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.96;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1115,102,0 chr2 20623964 . T C 1549.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.80;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1578,156,0 chr2 20624056 . G T 474.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.196;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.04;ReadPosRankSum=0.854;SOR=0.828 GT:AD:DP:GQ:PL 0/1:23,20:43:99:503,0,593 chr2 20624090 . T C 1051.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.38;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1080,87,0 chr2 20624098 . C T 297.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.394;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=1.583;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.03;ReadPosRankSum=-0.322;SOR=0.382 GT:AD:DP:GQ:PL 0/1:14,13:27:99:326,0,336 chr2 20624738 . C T 2486.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.078;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=1.162;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=0.351;SOR=0.797 GT:AD:DP:GQ:PL 0/1:90,93:183:99:2515,0,2431 chr2 20624799 . C T 2572.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.661;ClippingRankSum=0.000;DP=203;ExcessHet=3.0103;FS=0.516;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.74;ReadPosRankSum=1.184;SOR=0.751 GT:AD:DP:GQ:PL 0/1:110,92:202:99:2601,0,3021 chr2 20624898 . G A 2163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.509;ClippingRankSum=0.000;DP=191;ExcessHet=3.0103;FS=7.263;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.33;ReadPosRankSum=0.209;SOR=1.181 GT:AD:DP:GQ:PL 0/1:106,85:191:99:2192,0,3158 chr2 20624931 . C T 2691.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.262;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=7.074;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.74;ReadPosRankSum=-1.744;SOR=0.341 GT:AD:DP:GQ:PL 0/1:69,102:171:99:2720,0,1884 chr2 20624948 . T C 1738.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.641;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=5.391;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.67;ReadPosRankSum=-0.787;SOR=1.184 GT:AD:DP:GQ:PL 0/1:87,62:149:99:1767,0,2334 chr2 20625605 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 20638558 . G A 2654.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.673;ClippingRankSum=0.000;DP=241;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.02;ReadPosRankSum=1.082;SOR=0.713 GT:AD:DP:GQ:PL 0/1:142,99:241:99:2683,0,4062 chr2 20638800 . A G 1402.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.61;SOR=4.921 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1431,108,0 chr2 20641299 . C T 586.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.865;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=8.135;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.07;ReadPosRankSum=-0.206;SOR=0.127 GT:AD:DP:GQ:PL 0/1:30,23:53:99:615,0,978 chr2 20641422 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 20645513 . G A 2641.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.336;ClippingRankSum=0.000;DP=165;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.01;ReadPosRankSum=0.068;SOR=0.684 GT:AD:DP:GQ:PL 0/1:74,91:165:99:2670,0,2084 chr2 20645653 . C G 515.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.176;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.19;ReadPosRankSum=1.290;SOR=0.846 GT:AD:DP:GQ:PL 0/1:14,16:30:99:544,0,460 chr2 20670258 . T G 585.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.20;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:614,45,0 chr2 20670819 . G A 434.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.392;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=4.281;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.70;ReadPosRankSum=-1.551;SOR=0.290 GT:AD:DP:GQ:PL 0/1:31,19:50:99:463,0,1043 chr2 20671430 . A C 4266.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.66;SOR=3.513 GT:AD:DP:GQ:PL 1/1:0,112:112:99:4295,337,0 chr2 20671533 . A G 832.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.31;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:861,63,0 chr2 20684621 . C T 816.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:845,63,0 chr2 20968537 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 20981558 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.63;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 20981609 . G C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 20989476 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 21008652 . G A 4526.77 PASS AC=2;AF=1.00;AN=2;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=0.738 GT:AD:DP:GQ:PL 1/1:0,135:135:99:4555,405,0 chr2 21009931 . T C 1806.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.85;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1835,165,0 chr2 21011100 . T C 2340.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.054;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=0.582;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.72;ReadPosRankSum=0.044;SOR=0.746 GT:AD:DP:GQ:PL 0/1:75,84:159:99:2369,0,2073 chr2 21013610 . A G 1189.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.03;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1218,99,0 chr2 21014672 . G A 1947.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.20;SOR=3.139 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1976,165,0 chr2 21028042 . G A 2858.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.49;SOR=1.775 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2887,264,0 chr2 21028168 . T G 2134.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.43;SOR=1.536 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2163,186,0 chr2 21037729 . G A 388.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.41;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:417,33,0 chr2 21038635 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 21038636 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 21040767 . T G 1657.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.76;SOR=5.235 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1686,126,0 chr2 21042269 . C A 1583.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.76;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1612,120,0 chr2 21045347 . A C 49.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:77,6,0 chr2 21137711 . A G 1834.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.48;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1863,147,0 chr2 21142096 . T C 216.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.711;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=4.100;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.03;ReadPosRankSum=-1.448;SOR=1.890 GT:AD:DP:GQ:PL 0/1:15,9:24:99:245,0,554 chr2 21164085 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 21183879 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 21239224 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 21292400 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 21299099 . A G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.79;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 21299101 . T G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 21583413 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 22027913 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 22150854 . A T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 22150994 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 22229499 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 22325162 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 22363235 . G C 80.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0 chr2 22995916 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 23008058 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 23008130 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 23008269 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 23024069 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.47;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 23024078 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.06;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 23024105 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 23181724 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 23188252 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 23209823 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 23222099 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 23230731 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 23230750 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 23230824 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 23230887 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 23323225 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 23328918 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 23347006 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 23482076 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 23484896 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 23484904 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 23487572 . C T 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr2 23487680 . G C 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.253;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr2 23492631 . C T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 23533046 . C T 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr2 23536120 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 23561209 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 23561251 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 23562647 . A G 1098.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.56;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1127,90,0 chr2 23563288 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 23563321 . C A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 23564639 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 23570578 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 23579288 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 23593936 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 23614265 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 23622322 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 23628433 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 23632796 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 23636579 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 23637298 . G A 1450.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.205;ClippingRankSum=0.000;DP=177;ExcessHet=3.0103;FS=1.269;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.20;ReadPosRankSum=1.579;SOR=0.832 GT:AD:DP:GQ:PL 0/1:118,59:177:99:1479,0,3253 chr2 23637346 . C A 1000.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=2.440;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.58;ReadPosRankSum=-0.867;SOR=0.483 GT:AD:DP:GQ:PL 0/1:87,45:132:99:1029,0,2496 chr2 23637389 . A G 582.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.098;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.27;ReadPosRankSum=1.763;SOR=0.664 GT:AD:DP:GQ:PL 0/1:66,27:93:99:611,0,1737 chr2 23639016 . C T 513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.031;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.11;ReadPosRankSum=0.171;SOR=1.519 GT:AD:DP:GQ:PL 0/1:18,16:34:99:542,0,614 chr2 23639317 . C G 3236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.375;ClippingRankSum=0.000;DP=267;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.17;ReadPosRankSum=-1.892;SOR=0.712 GT:AD:DP:GQ:PL 0/1:143,123:266:99:3265,0,3860 chr2 23641073 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 23642144 . G A 878.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.086;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.85;ReadPosRankSum=0.217;SOR=0.706 GT:AD:DP:GQ:PL 0/1:46,35:81:99:907,0,1283 chr2 23642215 . T C 1863.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.172;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=5.415;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.01;ReadPosRankSum=1.868;SOR=0.368 GT:AD:DP:GQ:PL 0/1:61,72:133:99:1892,0,1736 chr2 23642239 . C A 2148.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.328;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=7.420;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.23;ReadPosRankSum=2.230;SOR=0.335 GT:AD:DP:GQ:PL 0/1:72,79:151:99:2177,0,2143 chr2 23642269 . C T 2219.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.260;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=1.852;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.33;ReadPosRankSum=0.585;SOR=0.557 GT:AD:DP:GQ:PL 0/1:95,85:180:99:2248,0,2564 chr2 23642306 . G A 2368.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.847;ClippingRankSum=0.000;DP=209;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.33;ReadPosRankSum=-0.829;SOR=0.729 GT:AD:DP:GQ:PL 0/1:121,88:209:99:2397,0,3113 chr2 23642390 . T C 7167.77 PASS AC=2;AF=1.00;AN=2;DP=222;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.29;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,222:222:99:7196,666,0 chr2 23643038 . G C 1774.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.132;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=2.946;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.16;ReadPosRankSum=-0.415;SOR=0.943 GT:AD:DP:GQ:PL 0/1:73,73:146:99:1803,0,2052 chr2 23643212 . C T 1151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.294;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.94;ReadPosRankSum=0.237;SOR=0.856 GT:AD:DP:GQ:PL 0/1:28,40:68:99:1180,0,747 chr2 23675126 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 23690375 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 23693168 . G A 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.18;ReadPosRankSum=1.041;SOR=1.112 GT:AD:DP:GQ:PL 0/1:6,9:15:99:331,0,205 chr2 23696505 . C T 1062.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.024;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.61;ReadPosRankSum=0.103;SOR=0.693 GT:AD:DP:GQ:PL 0/1:26,38:64:99:1091,0,681 chr2 23703110 . T C 1114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.629;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=3.309;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.22;ReadPosRankSum=1.071;SOR=1.495 GT:AD:DP:GQ:PL 0/1:24,34:58:99:1143,0,680 chr2 23703789 . T C 3078.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.216;ClippingRankSum=0.000;DP=241;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.83;ReadPosRankSum=-0.510;SOR=0.710 GT:AD:DP:GQ:PL 0/1:129,111:240:99:3107,0,3416 chr2 23704062 . C A 136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.77;ReadPosRankSum=0.963;SOR=1.022 GT:AD:DP:GQ:PL 0/1:9,5:14:99:165,0,327 chr2 23714406 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 23714431 . A G 104.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:132,9,0 chr2 23762459 . A T 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=0.447;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,224 chr2 23786293 . A G 825.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.052;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=5.105;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.51;ReadPosRankSum=-0.179;SOR=1.404 GT:AD:DP:GQ:PL 0/1:35,31:66:99:854,0,991 chr2 23810837 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 23819680 . C T 1410.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.59;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1439,126,0 chr2 23832188 . G C 4242.77 PASS AC=2;AF=1.00;AN=2;DP=130;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.64;SOR=0.788 GT:AD:DP:GQ:PL 1/1:0,130:130:99:4271,390,0 chr2 23833798 . C A 214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.42;ReadPosRankSum=0.380;SOR=0.495 GT:AD:DP:GQ:PL 0/1:9,7:16:99:243,0,328 chr2 23837162 . T C 128.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.46;ReadPosRankSum=1.383;SOR=0.941 GT:AD:DP:GQ:PL 0/1:1,5:6:24:157,0,24 chr2 23837271 . G A 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=-0.431;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,4:6:31:115,0,31 chr2 23887741 . G C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.645;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.126;SOR=2.833 GT:AD:DP:GQ:PL 0/1:2,3:5:34:110,0,34 chr2 23900669 . C T 39.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:67,6,0 chr2 23911145 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 23944398 . C T 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.849;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.91;ReadPosRankSum=-1.491;SOR=1.022 GT:AD:DP:GQ:PL 0/1:9,5:14:99:167,0,300 chr2 23964216 . C T 52.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:26:81,0,26 chr2 23971444 . C T 275.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.730;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.51;ReadPosRankSum=-1.415;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,13:19:99:304,0,160 chr2 23976928 . T C 1206.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.114;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.67;ReadPosRankSum=1.093;SOR=0.593 GT:AD:DP:GQ:PL 0/1:37,40:77:99:1235,0,963 chr2 24023305 . C T 2533.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.589;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=2.182;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.14;ReadPosRankSum=0.244;SOR=0.500 GT:AD:DP:GQ:PL 0/1:62,95:157:99:2562,0,1590 chr2 24023809 . A G 2070.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.347;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=0.607;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.11;ReadPosRankSum=-0.581;SOR=0.599 GT:AD:DP:GQ:PL 0/1:93,78:171:99:2099,0,2629 chr2 24027153 . G A 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr2 24032992 . C G 2061.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.97;SOR=2.066 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2090,168,0 chr2 24034076 . G T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 24039190 . G A 5549.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.617;ClippingRankSum=0.000;DP=389;ExcessHet=3.0103;FS=0.766;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.27;ReadPosRankSum=-0.584;SOR=0.742 GT:AD:DP:GQ:PL 0/1:185,204:389:99:5578,0,5032 chr2 24049787 . C T 186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.203;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.077;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.99;ReadPosRankSum=-1.737;SOR=0.275 GT:AD:DP:GQ:PL 0/1:9,8:17:99:215,0,257 chr2 24053866 . T C 2627.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.127;ClippingRankSum=0.000;DP=217;ExcessHet=3.0103;FS=4.693;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.17;ReadPosRankSum=-0.955;SOR=0.991 GT:AD:DP:GQ:PL 0/1:118,98:216:99:2656,0,3041 chr2 24054234 . A G 1895.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.602;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=5.575;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.22;ReadPosRankSum=1.688;SOR=0.400 GT:AD:DP:GQ:PL 0/1:95,74:169:99:1924,0,2510 chr2 24060613 . G T 455.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.747;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.66;ReadPosRankSum=1.549;SOR=0.818 GT:AD:DP:GQ:PL 0/1:21,15:36:99:484,0,688 chr2 24060983 . A T 473.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.666;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=3.163;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.79;ReadPosRankSum=-0.492;SOR=2.546 GT:AD:DP:GQ:PL 0/1:15,15:30:99:502,0,454 chr2 24062705 . T G 121.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.36;ReadPosRankSum=-0.524;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:150,0,27 chr2 24068210 . A G 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=1.068;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr2 24070597 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 24077693 . T C 2408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.995;ClippingRankSum=0.000;DP=177;ExcessHet=3.0103;FS=6.441;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.69;ReadPosRankSum=0.446;SOR=0.750 GT:AD:DP:GQ:PL 0/1:83,93:176:99:2437,0,2195 chr2 24077870 . C G 1545.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.701;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.908;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.97;ReadPosRankSum=-1.479;SOR=0.563 GT:AD:DP:GQ:PL 0/1:31,55:86:99:1574,0,934 chr2 24078062 . A G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 24084380 . G A 762.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.217;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=1.122;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.73;ReadPosRankSum=0.653;SOR=0.469 GT:AD:DP:GQ:PL 0/1:41,24:65:99:791,0,3730 chr2 24115558 . T G 421.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.134;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=16.801;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.61;ReadPosRankSum=-0.136;SOR=0.013 GT:AD:DP:GQ:PL 0/1:14,17:31:99:450,0,480 chr2 24119635 . T C 1421.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.104;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=0.707;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.58;ReadPosRankSum=-0.961;SOR=0.589 GT:AD:DP:GQ:PL 0/1:56,57:113:99:1450,0,1513 chr2 24119662 . G A 1492.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.268;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=4.530;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.33;ReadPosRankSum=-0.562;SOR=0.608 GT:AD:DP:GQ:PL 0/1:55,57:112:99:1521,0,1484 chr2 24122692 . C G 829.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.888;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.57;ReadPosRankSum=-0.669;SOR=0.821 GT:AD:DP:GQ:PL 0/1:35,31:66:99:858,0,1088 chr2 24122837 . C G 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.85;ReadPosRankSum=0.319;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,2:8:59:59,0,227 chr2 24124223 . A C 222.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.722;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=-1.265;SOR=0.593 GT:AD:DP:GQ:PL 0/1:9,8:17:99:251,0,325 chr2 24135131 . G C 656.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.460;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.95;ReadPosRankSum=0.087;SOR=0.593 GT:AD:DP:GQ:PL 0/1:40,26:66:99:685,0,1132 chr2 24135290 . A C 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-0.328;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr2 24146804 . C T 2891.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.21;SOR=0.936 GT:AD:DP:GQ:PL 1/1:0,99:99:99:2920,297,0 chr2 24147214 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 24161554 . T C 1653.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.80;SOR=1.480 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1682,156,0 chr2 24164990 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 24165227 . G A 3758.77 PASS AC=2;AF=1.00;AN=2;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.48;SOR=1.885 GT:AD:DP:GQ:PL 1/1:0,109:109:99:3787,327,0 chr2 24166806 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 24167648 . G A 1327.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.511;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.44;ReadPosRankSum=-0.248;SOR=0.780 GT:AD:DP:GQ:PL 0/1:40,46:86:99:1356,0,957 chr2 24169707 . T G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 24172400 . T C 627.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.53;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:656,48,0 chr2 24172425 . T C 842.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.27;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:871,63,0 chr2 24172637 . T C 1448.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.29;SOR=2.726 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1477,123,0 chr2 24172772 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 24174922 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 24175412 . T G 2542.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.39;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2571,210,0 chr2 24175577 . A T 1750.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.676;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.08;ReadPosRankSum=1.414;SOR=0.661 GT:AD:DP:GQ:PL 0/1:89,69:158:99:1779,0,2356 chr2 24177900 . A C 1340.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.169;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=0.645;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.01;ReadPosRankSum=-0.510;SOR=0.628 GT:AD:DP:GQ:PL 0/1:79,55:134:99:1369,0,2012 chr2 24184089 . T C 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.253;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr2 24190429 . A G 1089.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.667;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.768;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.85;ReadPosRankSum=-1.121;SOR=0.610 GT:AD:DP:GQ:PL 0/1:45,47:92:99:1118,0,1114 chr2 24190726 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 24204995 . G A 118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.048;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.363;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.48;ReadPosRankSum=0.018;SOR=0.744 GT:AD:DP:GQ:PL 0/1:9,5:14:99:147,0,302 chr2 24205990 . T C 753.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.111;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=2.368;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.22;ReadPosRankSum=0.041;SOR=1.061 GT:AD:DP:GQ:PL 0/1:25,28:53:99:782,0,681 chr2 24206644 . C G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.674;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 24208315 . C T 1290.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.225;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.84;ReadPosRankSum=-0.519;SOR=0.684 GT:AD:DP:GQ:PL 0/1:57,52:109:99:1319,0,1488 chr2 24208594 . T G 279.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:308,27,0 chr2 24208632 . C A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.282;SOR=2.093 GT:AD:DP:GQ:PL 0/1:3,3:6:73:107,0,73 chr2 24209269 . C T 1546.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.362;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=2.824;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-1.002;SOR=0.922 GT:AD:DP:GQ:PL 0/1:91,71:162:99:1575,0,2385 chr2 24209342 . C T 2656.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.06;SOR=2.690 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2685,234,0 chr2 24209751 . A G 631.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.238;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=2.163;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.04;ReadPosRankSum=-0.445;SOR=0.315 GT:AD:DP:GQ:PL 0/1:23,22:45:99:660,0,772 chr2 24209798 . C G 3274.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.42;SOR=2.608 GT:AD:DP:GQ:PL 1/1:0,98:98:99:3303,293,0 chr2 24209970 . A G 1718.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.410;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=0.386;SOR=0.638 GT:AD:DP:GQ:PL 0/1:62,66:128:99:1747,0,1660 chr2 24210068 . C T 247.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.04;ReadPosRankSum=-0.639;SOR=0.446 GT:AD:DP:GQ:PL 0/1:11,8:19:99:276,0,396 chr2 24212968 . T C 379.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.068;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.34;ReadPosRankSum=-0.563;SOR=1.371 GT:AD:DP:GQ:PL 0/1:6,11:17:99:408,0,175 chr2 24216407 . G C 268.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.949;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.92;ReadPosRankSum=-0.424;SOR=1.179 GT:AD:DP:GQ:PL 0/1:6,9:15:99:297,0,205 chr2 24218128 . A T 822.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.28;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,22:22:66:851,66,0 chr2 24252336 . T C 1223.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.99;SOR=2.712 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1252,108,0 chr2 24261281 . T C 1916.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.23;SOR=2.564 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1945,167,0 chr2 24275970 . T G 595.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.80;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:624,48,0 chr2 24286501 . T C 258.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.187;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.38;ReadPosRankSum=-0.267;SOR=0.184 GT:AD:DP:GQ:PL 0/1:9,9:18:99:287,0,322 chr2 24295927 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 24298624 . C T 569.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.52;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:598,51,0 chr2 24298897 . C T 904.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.51;SOR=2.753 GT:AD:DP:GQ:PL 1/1:0,27:27:81:933,81,0 chr2 24301736 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 24301856 . A G 574.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.764;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.13;ReadPosRankSum=-1.844;SOR=0.588 GT:AD:DP:GQ:PL 0/1:20,18:38:99:603,0,653 chr2 24302089 . C T 1380.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.485;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=6.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.54;ReadPosRankSum=-0.744;SOR=1.338 GT:AD:DP:GQ:PL 0/1:80,51:131:99:1409,0,2200 chr2 24324767 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 24329260 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 24334534 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 24334757 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 24353545 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-1.036;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 24359900 . C T 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr2 24360053 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 24369811 . C T 62.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:90,9,0 chr2 24369861 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 24369935 . C G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 24523778 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 24558940 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 24673520 . T G 4661.77 PASS AC=2;AF=1.00;AN=2;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.37;SOR=1.908 GT:AD:DP:GQ:PL 1/1:0,144:144:99:4690,431,0 chr2 24683058 . G C 2857.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.40;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2886,272,0 chr2 24697794 . A G 3372.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.354;ClippingRankSum=0.000;DP=265;ExcessHet=3.0103;FS=1.570;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.78;ReadPosRankSum=1.563;SOR=0.800 GT:AD:DP:GQ:PL 0/1:138,126:264:99:3401,0,3711 chr2 24710820 . A C 1837.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.91;SOR=7.658 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1866,135,0 chr2 24739268 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.27;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 24739269 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.86;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 24752076 . T G 3650.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.92;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3679,366,0 chr2 24777710 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 24790193 . T C 139.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.158;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.75;ReadPosRankSum=-0.676;SOR=1.609 GT:AD:DP:GQ:PL 0/1:7,6:13:99:168,0,216 chr2 24790654 . G C 590.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.41;ReadPosRankSum=-0.097;SOR=0.487 GT:AD:DP:GQ:PL 0/1:23,18:41:99:619,0,831 chr2 24799459 . G C 125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.97;ReadPosRankSum=0.967;SOR=0.527 GT:AD:DP:GQ:PL 0/1:2,5:7:62:154,0,62 chr2 24814173 . G A 380.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.477;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.40;ReadPosRankSum=0.000;SOR=1.371 GT:AD:DP:GQ:PL 0/1:6,11:17:99:409,0,168 chr2 24815399 . G A 854.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.08;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,22:22:66:883,66,0 chr2 24816007 . G C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 24816935 . G A 1813.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.77;SOR=3.398 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1842,147,0 chr2 24817213 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 24817477 . G A 84.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.150;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.21;ReadPosRankSum=-1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:18:113,0,18 chr2 24817554 . G A 1699.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.69;SOR=2.448 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1728,147,0 chr2 24819753 . A G 315.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.16;ReadPosRankSum=-1.187;SOR=0.430 GT:AD:DP:GQ:PL 0/1:14,10:24:99:344,0,513 chr2 24819756 . C G 1116.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.85;SOR=6.666 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1145,81,0 chr2 24821885 . A G 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.981;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.82;ReadPosRankSum=1.465;SOR=0.148 GT:AD:DP:GQ:PL 0/1:5,2:7:69:69,0,497 chr2 24821886 . C T 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.981;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.82;ReadPosRankSum=1.309;SOR=0.148 GT:AD:DP:GQ:PL 0/1:5,2:7:69:69,0,497 chr2 24821894 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.29;ReadPosRankSum=0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:4,2:6:72:72,0,453 chr2 24822326 . C T 411.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.812;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.88;ReadPosRankSum=0.455;SOR=0.776 GT:AD:DP:GQ:PL 0/1:5,13:18:99:440,0,155 chr2 24823221 . T C 1177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.136;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=1.021;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.83;ReadPosRankSum=1.506;SOR=0.922 GT:AD:DP:GQ:PL 0/1:29,41:70:99:1206,0,728 chr2 24823486 . T C 402.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.770;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.59;ReadPosRankSum=0.381;SOR=0.929 GT:AD:DP:GQ:PL 0/1:27,15:42:99:431,0,927 chr2 24824539 . A G 2457.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.104;ClippingRankSum=0.000;DP=215;ExcessHet=3.0103;FS=2.439;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.43;ReadPosRankSum=-0.037;SOR=0.888 GT:AD:DP:GQ:PL 0/1:119,96:215:99:2486,0,3088 chr2 24825978 . A G 1511.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.161;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.03;ReadPosRankSum=-0.296;SOR=0.671 GT:AD:DP:GQ:PL 0/1:62,54:116:99:1540,0,1696 chr2 24826069 . G C 2850.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.057;ClippingRankSum=0.000;DP=238;ExcessHet=3.0103;FS=2.192;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.98;ReadPosRankSum=-1.091;SOR=0.851 GT:AD:DP:GQ:PL 0/1:124,114:238:99:2879,0,3189 chr2 24826290 . A G 1368.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.39;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1397,111,0 chr2 24828108 . T C 3965.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.348;ClippingRankSum=0.000;DP=268;ExcessHet=3.0103;FS=0.481;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.91;ReadPosRankSum=-0.652;SOR=0.652 GT:AD:DP:GQ:PL 0/1:127,139:266:99:3994,0,3451 chr2 24828352 . G A 186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.35;ReadPosRankSum=-0.619;SOR=1.863 GT:AD:DP:GQ:PL 0/1:2,6:8:59:215,0,59 chr2 24830541 . C T 308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.695;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=3.039;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.15;ReadPosRankSum=-0.825;SOR=0.160 GT:AD:DP:GQ:PL 0/1:7,11:18:99:337,0,238 chr2 24831392 . G A 200.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.099;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.56;ReadPosRankSum=-0.726;SOR=0.836 GT:AD:DP:GQ:PL 0/1:14,7:21:99:229,0,487 chr2 24832905 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 24834429 . C G 828.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.026;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.94;ReadPosRankSum=1.111;SOR=0.793 GT:AD:DP:GQ:PL 0/1:25,27:52:99:857,0,750 chr2 24836769 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 24839765 . A G 1900.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.25;SOR=4.849 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1929,141,0 chr2 24840273 . G A 307.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.127;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=7.471;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.38;ReadPosRankSum=-0.636;SOR=2.494 GT:AD:DP:GQ:PL 0/1:13,10:23:99:336,0,462 chr2 24841324 . G A 1670.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.674;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=4.253;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.40;ReadPosRankSum=-1.150;SOR=0.352 GT:AD:DP:GQ:PL 0/1:37,59:96:99:1699,0,1123 chr2 24870596 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 24877869 . C A 1434.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.506;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=1.799;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.77;ReadPosRankSum=-0.178;SOR=0.954 GT:AD:DP:GQ:PL 0/1:38,53:91:99:1463,0,1007 chr2 24878033 . C G 1333.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.576;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=5.076;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.58;ReadPosRankSum=-0.118;SOR=1.259 GT:AD:DP:GQ:PL 0/1:56,50:106:99:1362,0,1410 chr2 24882984 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 24883008 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 24887215 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 24903459 . G C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 24918669 . A G 5429.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.256;ClippingRankSum=0.000;DP=458;ExcessHet=3.0103;FS=1.732;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=0.564;SOR=0.799 GT:AD:DP:GQ:PL 0/1:248,210:458:99:5458,0,6804 chr2 24919937 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 24924420 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 24924436 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr2 24931117 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 24951138 . G C 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.96;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr2 24951143 . A C 237.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:266,18,0 chr2 24971872 . G A 2358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.704;ClippingRankSum=0.000;DP=182;ExcessHet=3.0103;FS=3.560;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.96;ReadPosRankSum=-0.538;SOR=0.978 GT:AD:DP:GQ:PL 0/1:96,86:182:99:2387,0,2809 chr2 24981066 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 24982508 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 24982558 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 24995179 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 24995185 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 24995487 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 25001902 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 25001913 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 25031115 . C A 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr2 25040605 . T G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.645;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.524;SOR=2.833 GT:AD:DP:GQ:PL 0/1:2,3:5:34:110,0,34 chr2 25065293 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 25065318 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 25091317 . T C 1454.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.515;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=10.069;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.22;ReadPosRankSum=2.298;SOR=0.388 GT:AD:DP:GQ:PL 0/1:61,58:119:99:1483,0,1524 chr2 25093467 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 25131222 . G C 447.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.082;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=3.544;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.93;ReadPosRankSum=0.421;SOR=1.627 GT:AD:DP:GQ:PL 0/1:14,16:30:99:476,0,358 chr2 25136385 . C T 1536.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.681;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=1.512;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.92;ReadPosRankSum=-1.311;SOR=0.406 GT:AD:DP:GQ:PL 0/1:54,49:103:99:1565,0,1874 chr2 25137317 . C T 2940.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.130;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=1.218;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.93;ReadPosRankSum=0.956;SOR=0.565 GT:AD:DP:GQ:PL 0/1:87,110:197:99:2969,0,2221 chr2 25145136 . G A 1301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.800;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=0.989;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.76;ReadPosRankSum=-0.463;SOR=0.836 GT:AD:DP:GQ:PL 0/1:76,45:121:99:1330,0,2397 chr2 25145161 . T C 842.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.719;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.39;ReadPosRankSum=-1.067;SOR=0.574 GT:AD:DP:GQ:PL 0/1:47,27:74:99:871,0,1628 chr2 25154307 . T C 3132.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.447;ClippingRankSum=0.000;DP=246;ExcessHet=3.0103;FS=0.996;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.79;ReadPosRankSum=1.025;SOR=0.622 GT:AD:DP:GQ:PL 0/1:124,121:245:99:3161,0,3200 chr2 25154460 . C T 842.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.075;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.357;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.86;ReadPosRankSum=0.905;SOR=1.022 GT:AD:DP:GQ:PL 0/1:22,28:50:99:871,0,592 chr2 25239458 . C G 2018.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.409;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=1.241;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.78;ReadPosRankSum=-0.547;SOR=0.811 GT:AD:DP:GQ:PL 0/1:83,75:158:99:2047,0,2264 chr2 25239693 . C T 142.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.465;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.52;ReadPosRankSum=1.602;SOR=0.086 GT:AD:DP:GQ:PL 0/1:9,6:15:99:171,0,323 chr2 25240614 . G A 3528.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.171;ClippingRankSum=0.000;DP=259;ExcessHet=3.0103;FS=0.975;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.68;ReadPosRankSum=0.581;SOR=0.624 GT:AD:DP:GQ:PL 0/1:128,130:258:99:3557,0,3342 chr2 25241002 . C T 186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=-0.699;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:215,0,214 chr2 25244019 . G T 2515.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.587;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=6.683;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.38;ReadPosRankSum=-1.494;SOR=1.187 GT:AD:DP:GQ:PL 0/1:84,91:175:99:2544,0,2137 chr2 25246633 . C T 1311.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.211;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=1.842;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.43;ReadPosRankSum=-1.303;SOR=0.476 GT:AD:DP:GQ:PL 0/1:38,47:85:99:1340,0,1012 chr2 25247044 . C T 3924.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.729;ClippingRankSum=0.000;DP=278;ExcessHet=3.0103;FS=1.006;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.12;ReadPosRankSum=2.223;SOR=0.604 GT:AD:DP:GQ:PL 0/1:132,146:278:99:3953,0,3745 chr2 25249915 . C T 442.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.777;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.27;ReadPosRankSum=-0.566;SOR=0.368 GT:AD:DP:GQ:PL 0/1:14,15:29:99:471,0,463 chr2 25251411 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 25268576 . G T 56.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=14.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:84,12,0 chr2 25273971 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 25275616 . C A 3061.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.732;ClippingRankSum=0.000;DP=221;ExcessHet=3.0103;FS=2.398;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.85;ReadPosRankSum=1.423;SOR=0.522 GT:AD:DP:GQ:PL 0/1:109,112:221:99:3090,0,2944 chr2 25276998 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 25282924 . T C 454.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.468;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.74;ReadPosRankSum=-1.186;SOR=1.402 GT:AD:DP:GQ:PL 0/1:7,13:20:99:483,0,220 chr2 25328261 . C T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,72 chr2 25328823 . C T 813.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.685;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=4.460;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.07;ReadPosRankSum=-1.095;SOR=1.914 GT:AD:DP:GQ:PL 0/1:29,25:54:99:842,0,980 chr2 25379273 . G A 1880.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.195;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=1.357;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.61;ReadPosRankSum=0.463;SOR=0.542 GT:AD:DP:GQ:PL 0/1:92,70:162:99:1909,0,2708 chr2 25379581 . A G 607.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.93;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:636,48,0 chr2 25384148 . G C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr2 25432577 . T G 656.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.557;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=3.259;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.24;ReadPosRankSum=1.916;SOR=1.877 GT:AD:DP:GQ:PL 0/1:17,19:36:99:685,0,564 chr2 25432903 . T C 3390.77 PASS AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,104:104:99:3419,312,0 chr2 25434011 . C G 2924.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.71;SOR=1.905 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2953,232,0 chr2 25531366 . T C 934.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.091;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=1.168;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.38;ReadPosRankSum=0.415;SOR=0.922 GT:AD:DP:GQ:PL 0/1:32,33:65:99:963,0,935 chr2 25697432 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 25743113 . C T 4672.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.753;ClippingRankSum=0.000;DP=377;ExcessHet=3.0103;FS=3.369;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.46;ReadPosRankSum=0.088;SOR=0.537 GT:AD:DP:GQ:PL 0/1:202,173:375:99:4701,0,5485 chr2 25750440 . C T 468.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.080;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.74;ReadPosRankSum=-0.397;SOR=0.534 GT:AD:DP:GQ:PL 0/1:11,17:28:99:497,0,296 chr2 25750536 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr2 25767771 . T C 1098.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.177;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=1.989;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.27;ReadPosRankSum=-1.317;SOR=0.477 GT:AD:DP:GQ:PL 0/1:33,44:77:99:1127,0,773 chr2 25806538 . A C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.598;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,101 chr2 25810618 . A C 214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.050;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.30;ReadPosRankSum=-0.160;SOR=0.551 GT:AD:DP:GQ:PL 0/1:11,8:19:99:243,0,266 chr2 25828521 . T A 41.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:69,6,0 chr2 25845640 . C T 142.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.294;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.98;ReadPosRankSum=-0.483;SOR=1.179 GT:AD:DP:GQ:PL 0/1:8,5:13:99:171,0,214 chr2 25859188 . T C 422.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.01;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:33:451,33,0 chr2 25859343 . T C 264.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.565;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=6.701;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.03;ReadPosRankSum=-0.152;SOR=0.662 GT:AD:DP:GQ:PL 0/1:12,12:24:99:293,0,361 chr2 25915675 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 25915699 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.35;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 25915710 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 25928774 . A T 64.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:92,9,0 chr2 25981771 . G A 2960.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.449;ClippingRankSum=0.000;DP=237;ExcessHet=3.0103;FS=1.027;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.49;ReadPosRankSum=1.819;SOR=0.621 GT:AD:DP:GQ:PL 0/1:124,113:237:99:2989,0,3474 chr2 26034380 . C G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 26034381 . G C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.27;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 26141157 . T G 137.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.693;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=2.046;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.26;ReadPosRankSum=0.057;SOR=0.223 GT:AD:DP:GQ:PL 0/1:14,8:22:99:166,0,434 chr2 26185195 . T C 399.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.308;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.21;ReadPosRankSum=-0.245;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,14:18:79:428,0,79 chr2 26232134 . C G 1134.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.52;SOR=1.949 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1163,108,0 chr2 26232259 . G A 2854.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.99;SOR=1.139 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2883,252,0 chr2 26234399 . T G 1866.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.95;SOR=2.628 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1895,159,0 chr2 26239225 . A T 296.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:325,27,0 chr2 26244479 . C A 2616.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.55;SOR=2.073 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2645,234,0 chr2 26244785 . C T 736.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.66;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,21:21:62:765,62,0 chr2 26279085 . C A 3135.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.36;SOR=1.847 GT:AD:DP:GQ:PL 1/1:0,94:94:99:3164,282,0 chr2 26279900 . C T 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr2 26280007 . T C 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.40;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 26280570 . A G 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr2 26282990 . A G 2622.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.60;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2651,249,0 chr2 26284856 . T C 1263.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.29;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1292,105,0 chr2 26285307 . G A 363.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.515;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.53;ReadPosRankSum=1.685;SOR=1.751 GT:AD:DP:GQ:PL 0/1:11,11:22:99:392,0,359 chr2 26285319 . A G 981.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.28;SOR=5.058 GT:AD:DP:GQ:PL 1/1:0,25:25:75:1010,75,0 chr2 26289865 . T G 3322.77 PASS AC=2;AF=1.00;AN=2;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.56;SOR=1.037 GT:AD:DP:GQ:PL 1/1:0,99:99:99:3351,297,0 chr2 26290089 . G C 1070.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.47;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1099,84,0 chr2 26309623 . G T 2878.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.230;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=1.159;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=-0.710;SOR=0.830 GT:AD:DP:GQ:PL 0/1:78,107:185:99:2907,0,2009 chr2 26309867 . G A 1543.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.274;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=4.439;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.83;ReadPosRankSum=-0.070;SOR=0.354 GT:AD:DP:GQ:PL 0/1:31,51:82:99:1572,0,878 chr2 26310155 . C T 2325.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.276;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=1.834;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.64;ReadPosRankSum=0.160;SOR=0.855 GT:AD:DP:GQ:PL 0/1:95,89:184:99:2354,0,2527 chr2 26311382 . T C 4341.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.533;ClippingRankSum=0.000;DP=306;ExcessHet=3.0103;FS=0.417;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.19;ReadPosRankSum=0.196;SOR=0.648 GT:AD:DP:GQ:PL 0/1:144,162:306:99:4370,0,3854 chr2 26311586 . G A 3596.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.263;ClippingRankSum=0.000;DP=338;ExcessHet=3.0103;FS=1.299;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.67;ReadPosRankSum=-0.207;SOR=0.769 GT:AD:DP:GQ:PL 0/1:196,141:337:99:3625,0,5450 chr2 26311933 . G A 1535.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.475;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=17.554;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.49;ReadPosRankSum=0.986;SOR=0.706 GT:AD:DP:GQ:PL 0/1:67,56:123:99:1564,0,1903 chr2 26313431 . C G 3058.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.277;ClippingRankSum=0.000;DP=215;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.23;ReadPosRankSum=0.268;SOR=0.700 GT:AD:DP:GQ:PL 0/1:100,115:215:99:3087,0,2629 chr2 26313687 . T C 1500.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.005;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=3.788;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.97;ReadPosRankSum=0.145;SOR=0.918 GT:AD:DP:GQ:PL 0/1:48,46:94:99:1529,0,1550 chr2 26313826 . C T 3817.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.890;ClippingRankSum=0.000;DP=274;ExcessHet=3.0103;FS=0.459;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.93;ReadPosRankSum=0.933;SOR=0.649 GT:AD:DP:GQ:PL 0/1:132,142:274:99:3846,0,3641 chr2 26314631 . A C 7572.77 PASS AC=2;AF=1.00;AN=2;DP=240;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.55;SOR=1.456 GT:AD:DP:GQ:PL 1/1:0,240:240:99:7601,719,0 chr2 26318290 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.15;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 26318559 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 26319275 . A G 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr2 26364208 . G A 173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.665;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.15;ReadPosRankSum=-0.533;SOR=0.804 GT:AD:DP:GQ:PL 0/1:12,7:19:99:202,0,293 chr2 26367216 . T G 2468.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.657;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=3.407;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=-0.110;SOR=0.977 GT:AD:DP:GQ:PL 0/1:88,97:185:99:2497,0,2344 chr2 26367250 . C T 2136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.162;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=2.010;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=1.039;SOR=0.884 GT:AD:DP:GQ:PL 0/1:77,86:163:99:2165,0,2017 chr2 26374749 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 26383479 . T A 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.832;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.75;ReadPosRankSum=-0.522;SOR=1.022 GT:AD:DP:GQ:PL 0/1:4,9:13:94:298,0,94 chr2 26385124 . T C 1815.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.42;SOR=2.066 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1844,168,0 chr2 26386601 . G A 741.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.705;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=1.204;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.01;ReadPosRankSum=1.000;SOR=0.428 GT:AD:DP:GQ:PL 0/1:32,25:57:99:770,0,915 chr2 26402174 . C A 877.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.198;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.13;ReadPosRankSum=0.910;SOR=0.606 GT:AD:DP:GQ:PL 0/1:28,30:58:99:906,0,824 chr2 26414200 . C T 113.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.572;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.34;ReadPosRankSum=-2.260;SOR=0.495 GT:AD:DP:GQ:PL 0/1:6,5:11:99:142,0,154 chr2 26424409 . T G 3376.77 PASS AC=2;AF=1.00;AN=2;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.56;SOR=1.380 GT:AD:DP:GQ:PL 1/1:0,107:107:99:3405,321,0 chr2 26424661 . T C 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr2 26429803 . A G 1710.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.90;SOR=2.215 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1739,156,0 chr2 26430589 . G A 3001.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.063;ClippingRankSum=0.000;DP=217;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.83;ReadPosRankSum=-0.489;SOR=0.701 GT:AD:DP:GQ:PL 0/1:107,110:217:99:3030,0,2813 chr2 26431190 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 26440347 . A G 259.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.485;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=4.419;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.37;ReadPosRankSum=0.529;SOR=0.141 GT:AD:DP:GQ:PL 0/1:10,11:21:99:288,0,251 chr2 26444262 . A G 1905.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.717;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=14.901;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.71;ReadPosRankSum=-0.748;SOR=1.863 GT:AD:DP:GQ:PL 0/1:73,66:139:99:1934,0,2019 chr2 26444747 . T C 9652.77 PASS AC=2;AF=1.00;AN=2;DP=309;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.24;SOR=1.026 GT:AD:DP:GQ:PL 1/1:0,309:309:99:9681,925,0 chr2 26448676 . A G 5416.77 PASS AC=2;AF=1.00;AN=2;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.68;SOR=1.254 GT:AD:DP:GQ:PL 1/1:0,171:171:99:5445,513,0 chr2 26453886 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 26454435 . G T 2705.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.91;SOR=1.833 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2734,231,0 chr2 26454942 . A G 2158.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.54;SOR=2.917 GT:AD:DP:GQ:PL 1/1:0,55:55:99:2187,165,0 chr2 26468511 . T G 1712.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.457;ClippingRankSum=0.000;DP=170;ExcessHet=3.0103;FS=1.917;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.08;ReadPosRankSum=-1.017;SOR=0.848 GT:AD:DP:GQ:PL 0/1:100,70:170:99:1741,0,2364 chr2 26472275 . A G 543.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.99;ReadPosRankSum=0.780;SOR=0.693 GT:AD:DP:GQ:PL 0/1:16,16:32:99:572,0,567 chr2 26475151 . G C 206.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.873;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=-0.134;SOR=0.321 GT:AD:DP:GQ:PL 0/1:12,7:19:99:235,0,431 chr2 26475814 . G T 1260.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.767;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=3.975;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.85;ReadPosRankSum=0.679;SOR=1.318 GT:AD:DP:GQ:PL 0/1:50,41:91:99:1289,0,1575 chr2 26476258 . C G 1835.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.344;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=2.166;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.21;ReadPosRankSum=0.125;SOR=0.524 GT:AD:DP:GQ:PL 0/1:71,68:139:99:1864,0,1972 chr2 26476987 . G C 2630.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.321;ClippingRankSum=0.000;DP=169;ExcessHet=3.0103;FS=4.606;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.66;ReadPosRankSum=0.155;SOR=1.037 GT:AD:DP:GQ:PL 0/1:80,88:168:99:2659,0,2232 chr2 26477832 . G A 2338.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.285;ClippingRankSum=0.000;DP=187;ExcessHet=3.0103;FS=4.209;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.64;ReadPosRankSum=1.451;SOR=0.463 GT:AD:DP:GQ:PL 0/1:97,88:185:99:2367,0,2629 chr2 26478040 . C G 763.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.131;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=8.309;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.91;ReadPosRankSum=-0.919;SOR=2.395 GT:AD:DP:GQ:PL 0/1:46,24:70:99:792,0,1431 chr2 26478462 . G T 194.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.306;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=4.619;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.47;ReadPosRankSum=0.303;SOR=2.179 GT:AD:DP:GQ:PL 0/1:16,7:23:99:223,0,463 chr2 26480501 . A G 1074.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.67;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1103,84,0 chr2 26483774 . T C 142.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.367;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.52;ReadPosRankSum=0.459;SOR=0.818 GT:AD:DP:GQ:PL 0/1:9,6:15:99:171,0,258 chr2 26492641 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 26494773 . A G 917.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.430;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=5.338;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.92;ReadPosRankSum=0.987;SOR=0.277 GT:AD:DP:GQ:PL 0/1:45,32:77:99:946,0,1396 chr2 26501857 . T G 1111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.103;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=1.657;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.12;ReadPosRankSum=0.171;SOR=0.535 GT:AD:DP:GQ:PL 0/1:59,41:100:99:1140,0,1764 chr2 26503884 . G A 1840.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.495;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=6.961;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.36;ReadPosRankSum=-0.116;SOR=0.351 GT:AD:DP:GQ:PL 0/1:90,72:162:99:1869,0,2403 chr2 26504295 . C G 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr2 26510632 . C T 457.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.380;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=1.443;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.65;ReadPosRankSum=0.881;SOR=0.368 GT:AD:DP:GQ:PL 0/1:25,18:43:99:486,0,813 chr2 26514434 . T C 100.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.18;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:129,15,0 chr2 26516379 . T A 529.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.046;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=4.044;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.46;ReadPosRankSum=-1.238;SOR=0.307 GT:AD:DP:GQ:PL 0/1:33,23:56:99:558,0,882 chr2 26516555 . T C 1840.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.996;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=0.207;SOR=0.701 GT:AD:DP:GQ:PL 0/1:71,67:138:99:1869,0,1881 chr2 26519093 . G A 4361.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.466;ClippingRankSum=0.000;DP=349;ExcessHet=3.0103;FS=1.364;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.53;ReadPosRankSum=-0.598;SOR=0.798 GT:AD:DP:GQ:PL 0/1:188,160:348:99:4390,0,5256 chr2 26527689 . T C 3426.77 PASS AC=2;AF=1.00;AN=2;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.93;SOR=2.016 GT:AD:DP:GQ:PL 1/1:0,101:101:99:3455,303,0 chr2 26527777 . G A 6784.77 PASS AC=2;AF=1.00;AN=2;DP=202;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.59;SOR=1.225 GT:AD:DP:GQ:PL 1/1:0,202:202:99:6813,605,0 chr2 26529864 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 26534301 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 26535164 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 26538055 . C T 218.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.45;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:247,18,0 chr2 26551423 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 26558379 . G C 2990.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.51;SOR=1.880 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3019,275,0 chr2 26570779 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 26575723 . G A 251.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.93;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:280,21,0 chr2 26577554 . G A 10026.77 PASS AC=2;AF=1.00;AN=2;DP=314;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.93;SOR=1.168 GT:AD:DP:GQ:PL 1/1:0,314:314:99:10055,942,0 chr2 26578718 . G A 5961.77 PASS AC=2;AF=1.00;AN=2;DP=175;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.07;SOR=1.778 GT:AD:DP:GQ:PL 1/1:0,175:175:99:5990,525,0 chr2 26581140 . A G 856.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.28;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,22:22:66:885,66,0 chr2 26581275 . T C 2517.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.836;ClippingRankSum=0.000;DP=210;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.99;ReadPosRankSum=0.966;SOR=0.688 GT:AD:DP:GQ:PL 0/1:108,102:210:99:2546,0,2857 chr2 26581350 . G A 8295.77 PASS AC=2;AF=1.00;AN=2;DP=271;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.61;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,271:271:99:8324,811,0 chr2 26595138 . T C 8183.77 PASS AC=2;AF=1.00;AN=2;DP=183;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.34;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,183:183:99:8212,559,0 chr2 26595153 . C T 9165.77 PASS AC=2;AF=1.00;AN=2;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.94;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,214:214:99:9194,649,0 chr2 26605276 . A T 158.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:187,15,0 chr2 26609489 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 26619637 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 26623414 . T C 4612.77 PASS AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.26;SOR=1.781 GT:AD:DP:GQ:PL 1/1:0,143:143:99:4641,429,0 chr2 26644238 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 26656689 . G T 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr2 26665716 . G T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 26670715 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 26670796 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 26706414 . T G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 26710019 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 26721432 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 26724856 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 26724922 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 26725003 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 26728581 . G A 2931.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.32;SOR=2.049 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2960,264,0 chr2 26729633 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 26764613 . A G 704.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.615;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.58;ReadPosRankSum=-0.761;SOR=0.487 GT:AD:DP:GQ:PL 0/1:16,20:36:99:733,0,1108 chr2 26764620 . G C 626.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.359;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.59;ReadPosRankSum=-0.391;SOR=0.826 GT:AD:DP:GQ:PL 0/1:15,17:32:99:655,0,1117 chr2 26774163 . G A 3308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.159;ClippingRankSum=0.000;DP=269;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.35;ReadPosRankSum=1.005;SOR=0.691 GT:AD:DP:GQ:PL 0/1:140,128:268:99:3337,0,3523 chr2 26808976 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 26809108 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 26816924 . G A 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 26817051 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 26838235 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 26838236 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 26853689 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 26925596 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 26928023 . G A 850.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.741;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.93;ReadPosRankSum=-0.731;SOR=0.737 GT:AD:DP:GQ:PL 0/1:28,29:57:99:879,0,896 chr2 26932981 . G T 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=0.712;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:69:188,0,69 chr2 26932994 . G A 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.75;ReadPosRankSum=1.180;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:98:224,0,98 chr2 26933548 . T G 274.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.312;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.14;ReadPosRankSum=-1.050;SOR=0.593 GT:AD:DP:GQ:PL 0/1:4,9:13:99:303,0,116 chr2 26934528 . G A 301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.465;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.12;ReadPosRankSum=1.181;SOR=2.494 GT:AD:DP:GQ:PL 0/1:6,9:15:99:330,0,171 chr2 26934532 . A G 670.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.18;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:51:699,51,0 chr2 26934920 . T C 1051.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.203;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=2.978;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.43;ReadPosRankSum=-1.458;SOR=1.284 GT:AD:DP:GQ:PL 0/1:31,33:64:99:1080,0,871 chr2 26940176 . T C 2720.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.284;ClippingRankSum=0.000;DP=230;ExcessHet=3.0103;FS=1.039;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.83;ReadPosRankSum=-1.212;SOR=0.600 GT:AD:DP:GQ:PL 0/1:127,103:230:99:2749,0,3375 chr2 26940416 . G A 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.75;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 26940465 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 26941938 . G A 2494.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.289;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=14.581;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.11;ReadPosRankSum=0.240;SOR=0.301 GT:AD:DP:GQ:PL 0/1:107,99:206:99:2523,0,2994 chr2 26942334 . T C 225.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.042;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=4.752;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.54;ReadPosRankSum=1.103;SOR=2.055 GT:AD:DP:GQ:PL 0/1:9,9:18:99:254,0,321 chr2 26944452 . A G 128.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.46;ReadPosRankSum=0.967;SOR=0.941 GT:AD:DP:GQ:PL 0/1:1,5:6:24:157,0,24 chr2 26944916 . C T 1094.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.894;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=5.593;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.59;ReadPosRankSum=0.307;SOR=1.556 GT:AD:DP:GQ:PL 0/1:30,36:66:99:1123,0,843 chr2 26946622 . T C 206.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.860;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.78;ReadPosRankSum=2.583;SOR=1.609 GT:AD:DP:GQ:PL 0/1:8,7:15:99:235,0,255 chr2 26946672 . T G 580.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.090;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=2.200;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.59;ReadPosRankSum=1.326;SOR=1.347 GT:AD:DP:GQ:PL 0/1:17,18:35:99:609,0,569 chr2 26946974 . C A 2416.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.183;ClippingRankSum=0.000;DP=199;ExcessHet=3.0103;FS=1.113;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.21;ReadPosRankSum=-0.384;SOR=0.786 GT:AD:DP:GQ:PL 0/1:106,92:198:99:2445,0,3065 chr2 27022607 . T C 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.728;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=0.728;SOR=0.836 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,228 chr2 27023417 . C T 9064.77 PASS AC=2;AF=1.00;AN=2;DP=281;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.26;SOR=0.805 GT:AD:DP:GQ:PL 1/1:0,281:281:99:9093,844,0 chr2 27026377 . A G 2127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.332;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.76;ReadPosRankSum=-0.187;SOR=0.724 GT:AD:DP:GQ:PL 0/1:52,83:135:99:2156,0,1300 chr2 27036926 . G A 2508.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.398;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=3.409;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.56;ReadPosRankSum=1.162;SOR=0.975 GT:AD:DP:GQ:PL 0/1:94,91:185:99:2537,0,2526 chr2 27037601 . G A 2546.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.788;ClippingRankSum=0.000;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.90;ReadPosRankSum=-1.143;SOR=0.693 GT:AD:DP:GQ:PL 0/1:107,107:214:99:2575,0,2862 chr2 27038461 . A G 4466.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.93;SOR=2.191 GT:AD:DP:GQ:PL 1/1:0,124:124:99:4495,373,0 chr2 27040254 . T C 4976.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.160;ClippingRankSum=0.000;DP=368;ExcessHet=3.0103;FS=2.739;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.52;ReadPosRankSum=-1.616;SOR=0.833 GT:AD:DP:GQ:PL 0/1:185,183:368:99:5005,0,5055 chr2 27051989 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 27053334 . G A 1098.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.722;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.57;ReadPosRankSum=0.980;SOR=0.734 GT:AD:DP:GQ:PL 0/1:45,36:81:99:1127,0,1325 chr2 27056548 . A G 1809.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.32;SOR=1.919 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1838,168,0 chr2 27056952 . T C 96.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:124,9,0 chr2 27057224 . T A 763.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.137;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=6.794;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=-0.985;SOR=0.186 GT:AD:DP:GQ:PL 0/1:30,29:59:99:792,0,918 chr2 27057259 . G A 1123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.395;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=2.063;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.22;ReadPosRankSum=0.387;SOR=0.460 GT:AD:DP:GQ:PL 0/1:40,39:79:99:1152,0,1081 chr2 27057592 . A G 725.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.978;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.78;ReadPosRankSum=1.425;SOR=1.082 GT:AD:DP:GQ:PL 0/1:23,23:46:99:754,0,708 chr2 27067657 . A G 1533.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.915;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=1.340;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.65;ReadPosRankSum=-0.645;SOR=0.842 GT:AD:DP:GQ:PL 0/1:84,60:144:99:1562,0,2246 chr2 27069783 . T C 1519.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.215;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.34;ReadPosRankSum=0.357;SOR=0.714 GT:AD:DP:GQ:PL 0/1:36,57:93:99:1548,0,796 chr2 27070282 . G T 578.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.196;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=2.211;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.49;ReadPosRankSum=-0.660;SOR=1.044 GT:AD:DP:GQ:PL 0/1:38,23:61:99:607,0,1017 chr2 27079297 . T C 2707.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.105;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=2.267;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.72;ReadPosRankSum=1.715;SOR=0.498 GT:AD:DP:GQ:PL 0/1:91,93:184:99:2736,0,2683 chr2 27079891 . G A 194.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.64;ReadPosRankSum=0.000;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:92:223,0,92 chr2 27084901 . G C 2412.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.278;ClippingRankSum=0.000;DP=213;ExcessHet=3.0103;FS=3.130;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.33;ReadPosRankSum=1.568;SOR=0.923 GT:AD:DP:GQ:PL 0/1:121,92:213:99:2441,0,3587 chr2 27086791 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 27087525 . G A 603.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.190;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=3.399;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=1.794;SOR=1.981 GT:AD:DP:GQ:PL 0/1:16,19:35:99:632,0,521 chr2 27089403 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 27092196 . G A 415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.203;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.60;ReadPosRankSum=-1.782;SOR=1.085 GT:AD:DP:GQ:PL 0/1:20,13:33:99:444,0,696 chr2 27092384 . G A 4460.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.331;ClippingRankSum=0.000;DP=283;ExcessHet=3.0103;FS=0.442;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.76;ReadPosRankSum=-0.938;SOR=0.733 GT:AD:DP:GQ:PL 0/1:125,158:283:99:4489,0,3201 chr2 27096958 . A G 3210.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.58;SOR=0.833 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3239,315,0 chr2 27099019 . A G 905.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.60;SOR=4.091 GT:AD:DP:GQ:PL 1/1:0,24:24:72:934,72,0 chr2 27100517 . C T 2225.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.071;ClippingRankSum=0.000;DP=220;ExcessHet=3.0103;FS=2.317;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.12;ReadPosRankSum=-0.148;SOR=0.767 GT:AD:DP:GQ:PL 0/1:129,91:220:99:2254,0,3304 chr2 27100600 . A C 4186.77 PASS AC=2;AF=1.00;AN=2;DP=134;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.24;SOR=1.574 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4215,401,0 chr2 27101168 . G A 516.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.14;ReadPosRankSum=-0.439;SOR=0.922 GT:AD:DP:GQ:PL 0/1:12,15:27:99:545,0,419 chr2 27101856 . G C 3948.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.191;ClippingRankSum=0.000;DP=333;ExcessHet=3.0103;FS=2.941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.89;ReadPosRankSum=-0.520;SOR=0.675 GT:AD:DP:GQ:PL 0/1:183,149:332:99:3977,0,5064 chr2 27101883 . G T 4318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.331;ClippingRankSum=0.000;DP=349;ExcessHet=3.0103;FS=0.811;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.37;ReadPosRankSum=1.670;SOR=0.631 GT:AD:DP:GQ:PL 0/1:191,158:349:99:4347,0,5416 chr2 27104054 . C T 187.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.31;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:216,18,0 chr2 27128411 . G A 899.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.589;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.11;ReadPosRankSum=0.560;SOR=0.625 GT:AD:DP:GQ:PL 0/1:47,34:81:99:928,0,1443 chr2 27129978 . C T 1325.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.466;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=6.496;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.22;ReadPosRankSum=1.119;SOR=1.531 GT:AD:DP:GQ:PL 0/1:33,44:77:99:1354,0,925 chr2 27130639 . G C 3182.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.101;ClippingRankSum=0.000;DP=211;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=0.615;SOR=0.653 GT:AD:DP:GQ:PL 0/1:99,112:211:99:3211,0,2780 chr2 27130762 . G C 1019.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.592;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=1.197;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.58;ReadPosRankSum=2.608;SOR=0.475 GT:AD:DP:GQ:PL 0/1:24,34:58:99:1048,0,690 chr2 27131305 . C A 2826.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.47;SOR=2.805 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2855,246,0 chr2 27132103 . C T 3826.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.918;ClippingRankSum=0.000;DP=289;ExcessHet=3.0103;FS=7.194;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.24;ReadPosRankSum=-0.210;SOR=0.426 GT:AD:DP:GQ:PL 0/1:146,143:289:99:3855,0,4136 chr2 27132586 . A C 2967.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=2.110;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=27.78;ReadPosRankSum=-0.629;SOR=1.732 GT:AD:DP:GQ:PL 1/1:1,83:84:99:2996,242,0 chr2 27133123 . G T 3247.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.009;ClippingRankSum=0.000;DP=261;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.49;ReadPosRankSum=0.435;SOR=0.682 GT:AD:DP:GQ:PL 0/1:134,126:260:99:3276,0,3557 chr2 27133410 . T C 2058.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.052;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=11.070;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.79;ReadPosRankSum=-1.832;SOR=1.421 GT:AD:DP:GQ:PL 0/1:84,77:161:99:2087,0,2332 chr2 27138378 . C T 848.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=2.124;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=-0.519;SOR=0.439 GT:AD:DP:GQ:PL 0/1:32,31:63:99:877,0,925 chr2 27138550 . G T 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=0.812;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,262 chr2 27158890 . G T 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.98;ReadPosRankSum=0.494;SOR=0.941 GT:AD:DP:GQ:PL 0/1:5,6:11:99:149,0,176 chr2 27159037 . A G 641.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.366;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.65;ReadPosRankSum=0.793;SOR=1.044 GT:AD:DP:GQ:PL 0/1:22,19:41:99:670,0,757 chr2 27200778 . T C 504.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.56;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,14:14:42:533,42,0 chr2 27201628 . G A 10008.77 PASS AC=2;AF=1.00;AN=2;DP=293;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.16;SOR=1.065 GT:AD:DP:GQ:PL 1/1:0,293:293:99:10037,879,0 chr2 27201768 . G A 13573.77 PASS AC=2;AF=1.00;AN=2;DP=412;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.03;SOR=0.698 GT:AD:DP:GQ:PL 1/1:0,411:411:99:13602,1233,0 chr2 27203646 . G C 3028.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.92;SOR=1.968 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3057,276,0 chr2 27204010 . C T 1260.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.18;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1289,114,0 chr2 27205279 . A G 4020.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.03;SOR=3.217 GT:AD:DP:GQ:PL 1/1:0,110:110:99:4049,331,0 chr2 27205427 . A G 11380.77 PASS AC=2;AF=1.00;AN=2;DP=359;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.70;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,359:359:99:11409,1078,0 chr2 27205834 . A C 217.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.11;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:246,21,0 chr2 27205947 . C G 1543.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.56;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1572,137,0 chr2 27206009 . C G 2937.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.28;SOR=1.770 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2966,273,0 chr2 27207913 . A G 870.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.42;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,24:24:72:899,72,0 chr2 27212382 . A G 4888.77 PASS AC=2;AF=1.00;AN=2;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.72;SOR=1.094 GT:AD:DP:GQ:PL 1/1:0,145:145:99:4917,435,0 chr2 27212506 . G A 2571.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.40;SOR=1.550 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2600,231,0 chr2 27263266 . G A 1713.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.505;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.05;ReadPosRankSum=-0.649;SOR=0.758 GT:AD:DP:GQ:PL 0/1:54,68:122:99:1742,0,1371 chr2 27268475 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.70;QD=28.42;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 27268479 . G C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.70;QD=29.71;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 27268496 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.70;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 27313221 . G A 509.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.435;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.00;ReadPosRankSum=-0.115;SOR=0.524 GT:AD:DP:GQ:PL 0/1:32,19:51:99:538,0,979 chr2 27328100 . A G 1727.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.518;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=1.987;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.73;ReadPosRankSum=0.357;SOR=0.536 GT:AD:DP:GQ:PL 0/1:88,73:161:99:1756,0,2399 chr2 27333854 . G A 4013.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.882;ClippingRankSum=0.000;DP=287;ExcessHet=3.0103;FS=0.914;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.03;ReadPosRankSum=-1.760;SOR=0.628 GT:AD:DP:GQ:PL 0/1:141,145:286:99:4042,0,4044 chr2 27335385 . A G 824.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.617;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=5.777;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.59;ReadPosRankSum=1.642;SOR=0.293 GT:AD:DP:GQ:PL 0/1:49,37:86:99:853,0,1245 chr2 27343653 . T A 1070.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.421;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=7.865;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.90;ReadPosRankSum=1.057;SOR=0.171 GT:AD:DP:GQ:PL 0/1:41,42:83:99:1099,0,1261 chr2 27356364 . T C 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=0.366;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr2 27366943 . T C 2500.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.092;ClippingRankSum=0.000;DP=212;ExcessHet=3.0103;FS=1.073;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.85;ReadPosRankSum=0.036;SOR=0.592 GT:AD:DP:GQ:PL 0/1:119,92:211:99:2529,0,3167 chr2 27368937 . T C 1729.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.125;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=2.590;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.31;ReadPosRankSum=-0.277;SOR=0.439 GT:AD:DP:GQ:PL 0/1:48,65:113:99:1758,0,1218 chr2 27369556 . C T 1562.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.408;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=2.667;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.79;ReadPosRankSum=0.896;SOR=1.042 GT:AD:DP:GQ:PL 0/1:44,55:99:99:1591,0,1182 chr2 27372889 . G C 780.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.614;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.913;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.01;ReadPosRankSum=0.221;SOR=0.516 GT:AD:DP:GQ:PL 0/1:49,29:78:99:809,0,1681 chr2 27373528 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 27375230 . T C 1093.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.039;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.704;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.23;ReadPosRankSum=-0.381;SOR=0.347 GT:AD:DP:GQ:PL 0/1:28,32:60:99:1122,0,908 chr2 27376265 . G A 6797.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.488;ClippingRankSum=0.000;DP=485;ExcessHet=3.0103;FS=0.533;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.02;ReadPosRankSum=-1.286;SOR=0.753 GT:AD:DP:GQ:PL 0/1:242,243:485:99:6826,0,6520 chr2 27377008 . T G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr2 27377372 . G A 2593.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.427;ClippingRankSum=0.000;DP=251;ExcessHet=3.0103;FS=0.480;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.33;ReadPosRankSum=-0.891;SOR=0.648 GT:AD:DP:GQ:PL 0/1:147,104:251:99:2622,0,3958 chr2 27381412 . A G 130.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.060;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=5.006;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.88;ReadPosRankSum=-1.174;SOR=0.045 GT:AD:DP:GQ:PL 0/1:13,6:19:99:159,0,486 chr2 27383231 . A G 984.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.272;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.63;ReadPosRankSum=1.671;SOR=0.806 GT:AD:DP:GQ:PL 0/1:44,34:78:99:1013,0,1425 chr2 27383719 . C T 389.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.183;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=1.786;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=1.322;SOR=1.214 GT:AD:DP:GQ:PL 0/1:16,13:29:99:418,0,547 chr2 27385248 . C T 415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.065;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=-0.253;SOR=0.874 GT:AD:DP:GQ:PL 0/1:15,17:32:99:444,0,377 chr2 27405045 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 27427062 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 27433169 . A G 543.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.369;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.48;ReadPosRankSum=-0.673;SOR=0.960 GT:AD:DP:GQ:PL 0/1:12,21:33:99:572,0,300 chr2 27434300 . T C 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 27436624 . T C 1702.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.973;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.674;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.90;ReadPosRankSum=2.033;SOR=0.598 GT:AD:DP:GQ:PL 0/1:64,68:132:99:1731,0,1699 chr2 27440348 . T A 1595.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.559;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=2.352;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=0.701;SOR=0.969 GT:AD:DP:GQ:PL 0/1:75,62:137:99:1624,0,1876 chr2 27440549 . G T 2379.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.159;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.14;ReadPosRankSum=-0.451;SOR=0.688 GT:AD:DP:GQ:PL 0/1:109,87:196:99:2408,0,3203 chr2 27442494 . C G 816.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.090;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=1.028;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.84;ReadPosRankSum=0.407;SOR=0.935 GT:AD:DP:GQ:PL 0/1:30,29:59:99:845,0,893 chr2 27444430 . A G 738.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.983;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.902;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.23;ReadPosRankSum=-1.094;SOR=0.533 GT:AD:DP:GQ:PL 0/1:51,29:80:99:767,0,1415 chr2 27447440 . G A 2184.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.800;ClippingRankSum=0.000;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.39;ReadPosRankSum=-0.626;SOR=0.703 GT:AD:DP:GQ:PL 0/1:63,79:142:99:2213,0,1745 chr2 27453420 . A T 2572.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.665;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=2.483;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.188;SOR=0.906 GT:AD:DP:GQ:PL 0/1:109,87:196:99:2601,0,2919 chr2 27454824 . G A 648.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.378;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=1.128;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.48;ReadPosRankSum=-0.308;SOR=1.053 GT:AD:DP:GQ:PL 0/1:26,26:52:99:677,0,762 chr2 27454896 . C T 187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.819;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.71;ReadPosRankSum=-0.083;SOR=1.022 GT:AD:DP:GQ:PL 0/1:20,8:28:99:216,0,534 chr2 27458731 . A C 800.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.657;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=5.007;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.68;ReadPosRankSum=0.990;SOR=0.218 GT:AD:DP:GQ:PL 0/1:19,29:48:99:829,0,569 chr2 27459983 . G T 267.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.34;ReadPosRankSum=1.354;SOR=1.802 GT:AD:DP:GQ:PL 0/1:3,8:11:88:296,0,88 chr2 27461867 . A G 1674.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.523;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.31;ReadPosRankSum=1.393;SOR=0.671 GT:AD:DP:GQ:PL 0/1:70,66:136:99:1703,0,1876 chr2 27462521 . G A 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=0.210;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr2 27465734 . C T 2043.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.996;ClippingRankSum=0.000;DP=174;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.75;ReadPosRankSum=1.165;SOR=0.680 GT:AD:DP:GQ:PL 0/1:96,78:174:99:2072,0,2412 chr2 27483773 . T C 1103.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.083;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=2.245;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=-1.437;SOR=1.061 GT:AD:DP:GQ:PL 0/1:27,37:64:99:1132,0,788 chr2 27492340 . T A 894.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.065;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=1.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.77;ReadPosRankSum=-0.451;SOR=0.458 GT:AD:DP:GQ:PL 0/1:34,31:65:99:923,0,1037 chr2 27492549 . C T 1891.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.658;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=7.470;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.61;ReadPosRankSum=0.379;SOR=1.258 GT:AD:DP:GQ:PL 0/1:80,70:150:99:1920,0,2053 chr2 27493137 . T C 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 27493627 . G A 1582.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.522;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.40;ReadPosRankSum=0.781;SOR=0.551 GT:AD:DP:GQ:PL 0/1:37,49:86:99:1611,0,1183 chr2 27499104 . T C 2230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.433;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=0.544;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=0.618;SOR=0.628 GT:AD:DP:GQ:PL 0/1:96,88:184:99:2259,0,2494 chr2 27499549 . G A 1199.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.347;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=5.170;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.44;ReadPosRankSum=-1.997;SOR=0.273 GT:AD:DP:GQ:PL 0/1:31,42:73:99:1228,0,871 chr2 27505910 . C G 4859.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.779;ClippingRankSum=0.000;DP=335;ExcessHet=3.0103;FS=0.905;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.51;ReadPosRankSum=-0.376;SOR=0.755 GT:AD:DP:GQ:PL 0/1:154,181:335:99:4888,0,4238 chr2 27506613 . G A 6665.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.883;ClippingRankSum=0.000;DP=521;ExcessHet=3.0103;FS=3.215;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.79;ReadPosRankSum=0.388;SOR=0.501 GT:AD:DP:GQ:PL 0/1:267,254:521:99:6694,0,7351 chr2 27508073 . T C 2532.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.187;ClippingRankSum=0.000;DP=173;ExcessHet=3.0103;FS=2.673;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.64;ReadPosRankSum=-0.047;SOR=0.947 GT:AD:DP:GQ:PL 0/1:78,95:173:99:2561,0,1986 chr2 27508345 . T C 1213.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.216;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.67;ReadPosRankSum=0.790;SOR=0.826 GT:AD:DP:GQ:PL 0/1:24,41:65:99:1242,0,637 chr2 27523079 . A G 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.998;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=-0.256;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:173,0,232 chr2 27638840 . G A 2435.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.31;SOR=2.336 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2464,213,0 chr2 27662011 . C T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.39;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 27664167 . C A 11598.77 PASS AC=2;AF=1.00;AN=2;DP=345;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.62;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,345:345:99:11627,1035,0 chr2 27669827 . T A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 27728791 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 27729368 . A T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 27729900 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 27752104 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 27772914 . A C 291.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.20;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:320,24,0 chr2 27847204 . T A 370.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.679;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=3.468;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.54;ReadPosRankSum=0.083;SOR=2.093 GT:AD:DP:GQ:PL 0/1:9,11:20:99:399,0,272 chr2 27908366 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 27908376 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 28043177 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 28043202 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 28045600 . C T 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr2 28128055 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 28128144 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 28202643 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 28236901 . A G 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr2 28237139 . G T 1167.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.531;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.58;ReadPosRankSum=0.516;SOR=0.800 GT:AD:DP:GQ:PL 0/1:43,43:86:99:1196,0,1138 chr2 28241568 . T C 820.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.66;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,22:22:66:849,66,0 chr2 28249937 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 28334023 . A C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 28368071 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 28377372 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 28411923 . G A 1922.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.197;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.40;ReadPosRankSum=0.142;SOR=0.684 GT:AD:DP:GQ:PL 0/1:83,72:155:99:1951,0,2308 chr2 28431996 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 28439885 . A G 32.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:60,6,0 chr2 28440020 . G A 95.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.150;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=1.068;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,6:8:43:124,0,43 chr2 28457764 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 28468621 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 28468669 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 28470028 . G A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 28470138 . C A 61.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.139;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.15;ReadPosRankSum=0.875;SOR=0.941 GT:AD:DP:GQ:PL 0/1:9,3:12:90:90,0,262 chr2 28493490 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 28493498 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 28495679 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 28495683 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.73;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 28496030 . A G 5036.77 PASS AC=2;AF=1.00;AN=2;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.71;SOR=1.231 GT:AD:DP:GQ:PL 1/1:0,154:154:99:5065,462,0 chr2 28516584 . T G 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.86;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr2 28525584 . A C 179.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.91;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:208,15,0 chr2 28525990 . T C 7713.77 PASS AC=2;AF=1.00;AN=2;DP=236;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.69;SOR=0.876 GT:AD:DP:GQ:PL 1/1:0,236:236:99:7742,709,0 chr2 28526049 . A C 6037.77 PASS AC=2;AF=1.00;AN=2;DP=187;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.29;SOR=1.325 GT:AD:DP:GQ:PL 1/1:0,187:187:99:6066,561,0 chr2 28529631 . T C 3150.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.83;SOR=1.105 GT:AD:DP:GQ:PL 1/1:0,90:90:99:3179,270,0 chr2 28529688 . T C 2425.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.17;SOR=0.779 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2454,212,0 chr2 28529860 . C G 695.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.56;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:724,51,0 chr2 28529874 . A G 646.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.59;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:675,45,0 chr2 28537218 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 28538047 . T C 273.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.22;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:302,24,0 chr2 28538390 . A G 1075.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1104,99,0 chr2 28538415 . A G 951.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.73;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,30:30:90:980,90,0 chr2 28538617 . G A 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr2 28539429 . T C 185.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.97;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:214,18,0 chr2 28539448 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 28540507 . G T 6455.77 PASS AC=2;AF=1.00;AN=2;DP=201;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.12;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,201:201:99:6484,602,0 chr2 28541591 . C A 3201.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=7.328 GT:AD:DP:GQ:PL 1/1:0,78:78:99:3230,235,0 chr2 28543387 . T C 1215.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.27;SOR=4.548 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1244,90,0 chr2 28544183 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 28548757 . T G 4831.77 PASS AC=2;AF=1.00;AN=2;DP=148;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.65;SOR=1.218 GT:AD:DP:GQ:PL 1/1:0,148:148:99:4860,444,0 chr2 28549030 . T C 1137.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.01;SOR=6.736 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1166,84,0 chr2 28562754 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 28562887 . G C 1105.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.56;SOR=2.765 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1134,96,0 chr2 28563675 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 28567121 . G A 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=0.084;SOR=0.368 GT:AD:DP:GQ:PL 0/1:2,4:6:66:115,0,66 chr2 28569288 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 28570482 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 28573026 . G A 1231.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1260,84,0 chr2 28573032 . C T 1273.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.99;SOR=5.353 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1302,87,0 chr2 28573095 . G A 2060.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.71;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2089,189,0 chr2 28573424 . G A 806.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.00;SOR=4.712 GT:AD:DP:GQ:PL 1/1:0,21:21:63:835,63,0 chr2 28593558 . T C 489.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.750;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.31;ReadPosRankSum=2.667;SOR=1.091 GT:AD:DP:GQ:PL 0/1:17,15:32:99:518,0,533 chr2 28594081 . C T 827.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.646;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.906;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.34;ReadPosRankSum=-0.339;SOR=0.578 GT:AD:DP:GQ:PL 0/1:38,35:73:99:856,0,898 chr2 28597774 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-1.036;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 28598795 . C T 1701.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.588;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=2.563;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.51;ReadPosRankSum=0.501;SOR=0.474 GT:AD:DP:GQ:PL 0/1:60,66:126:99:1730,0,1679 chr2 28598965 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 28601926 . C G 2223.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.137;ClippingRankSum=0.000;DP=193;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.52;ReadPosRankSum=1.070;SOR=0.694 GT:AD:DP:GQ:PL 0/1:102,91:193:99:2252,0,2621 chr2 28617477 . G T 760.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.067;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.56;ReadPosRankSum=1.607;SOR=0.693 GT:AD:DP:GQ:PL 0/1:16,25:41:99:789,0,529 chr2 28617824 . C T 1664.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.017;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=2.504;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.65;ReadPosRankSum=-1.743;SOR=0.961 GT:AD:DP:GQ:PL 0/1:59,63:122:99:1693,0,1563 chr2 28618154 . G A 258.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.461;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.885;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.09;ReadPosRankSum=0.309;SOR=0.245 GT:AD:DP:GQ:PL 0/1:22,10:32:99:287,0,720 chr2 28618182 . G A 490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.198;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=2.763;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.92;ReadPosRankSum=-1.162;SOR=0.344 GT:AD:DP:GQ:PL 0/1:37,18:55:99:519,0,1123 chr2 28624767 . G A 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.000;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr2 28624939 . C G 1075.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.331;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=2.592;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.55;ReadPosRankSum=-0.547;SOR=0.481 GT:AD:DP:GQ:PL 0/1:56,46:102:99:1104,0,1430 chr2 28628827 . A G 356.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.052;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.89;ReadPosRankSum=0.929;SOR=0.784 GT:AD:DP:GQ:PL 0/1:17,13:30:99:385,0,520 chr2 28630355 . A G 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=1.242;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr2 28630485 . C T 767.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.128;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=5.320;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.80;ReadPosRankSum=-0.250;SOR=0.182 GT:AD:DP:GQ:PL 0/1:35,25:60:99:796,0,1176 chr2 28630510 . T C 850.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.925;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.976;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.77;ReadPosRankSum=1.157;SOR=0.526 GT:AD:DP:GQ:PL 0/1:49,30:79:99:879,0,1502 chr2 28631928 . C T 793.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.403;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.17;ReadPosRankSum=-0.734;SOR=1.236 GT:AD:DP:GQ:PL 0/1:32,24:56:99:822,0,1117 chr2 28631949 . G A 1164.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.063;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.24;ReadPosRankSum=0.615;SOR=0.752 GT:AD:DP:GQ:PL 0/1:52,36:88:99:1193,0,1839 chr2 28632091 . C T 3570.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.572;ClippingRankSum=0.000;DP=326;ExcessHet=3.0103;FS=1.323;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.95;ReadPosRankSum=1.093;SOR=0.794 GT:AD:DP:GQ:PL 0/1:184,142:326:99:3599,0,4703 chr2 28633181 . T C 2545.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.433;ClippingRankSum=0.000;DP=165;ExcessHet=3.0103;FS=3.596;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.43;ReadPosRankSum=-0.381;SOR=1.100 GT:AD:DP:GQ:PL 0/1:83,82:165:99:2574,0,2472 chr2 28633329 . A G 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=0.132;SOR=0.473 GT:AD:DP:GQ:PL 0/1:8,6:14:99:208,0,292 chr2 28640872 . A G 1756.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.121;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.17;ReadPosRankSum=0.393;SOR=0.691 GT:AD:DP:GQ:PL 0/1:59,65:124:99:1785,0,1666 chr2 28642656 . C G 134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.63;ReadPosRankSum=0.018;SOR=0.307 GT:AD:DP:GQ:PL 0/1:9,5:14:99:163,0,334 chr2 28642894 . T C 1680.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.816;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=5.044;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.84;ReadPosRankSum=-0.066;SOR=0.674 GT:AD:DP:GQ:PL 0/1:75,67:142:99:1709,0,2086 chr2 28643102 . T C 336.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.514;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=4.925;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=1.393;SOR=0.105 GT:AD:DP:GQ:PL 0/1:12,13:25:99:365,0,391 chr2 28643166 . A C 163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.135;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.47;ReadPosRankSum=-0.135;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,6:8:47:192,0,47 chr2 28749713 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 28751600 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 28752241 . G C 1205.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=3.545 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1234,96,0 chr2 28778825 . A G 2860.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.66;SOR=1.781 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2889,255,0 chr2 28779125 . A C 559.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.115;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.73;ReadPosRankSum=-1.480;SOR=1.358 GT:AD:DP:GQ:PL 0/1:10,17:27:99:588,0,290 chr2 28783725 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 28819011 . T C 803.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.49;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,24:24:72:832,72,0 chr2 28822457 . C T 933.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.18;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,32:32:96:962,96,0 chr2 28824042 . C T 141.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.54;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:169,12,0 chr2 28824043 . A G 141.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.69;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:169,12,0 chr2 28829390 . T C 1720.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.09;SOR=2.790 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1749,155,0 chr2 28860984 . C A 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.02;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr2 28864933 . C A 1129.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.19;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1158,96,0 chr2 28887527 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 28900836 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 28912602 . C G 4427.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=1.398 GT:AD:DP:GQ:PL 1/1:0,138:138:99:4456,414,0 chr2 28912924 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 28922859 . G T 3424.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.25;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3453,308,0 chr2 28926638 . C G 352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.292;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.57;ReadPosRankSum=0.555;SOR=1.270 GT:AD:DP:GQ:PL 0/1:15,11:26:99:381,0,514 chr2 28929590 . A G 1642.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1671,165,0 chr2 28938144 . G A 2871.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=1.030 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2900,260,0 chr2 28946328 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 28946746 . T C 2211.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.05;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2240,206,0 chr2 28957401 . C G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 28968411 . G C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 28976341 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 28979326 . G A 73.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:101,12,0 chr2 28979520 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 28988696 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 28988966 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 28990542 . C T 56.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=14.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:84,12,0 chr2 28995030 . C T 460.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.70;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:489,36,0 chr2 28998615 . T G 237.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:266,24,0 chr2 29001227 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 29001236 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 29003632 . G A 4905.77 PASS AC=2;AF=1.00;AN=2;DP=150;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.71;SOR=1.895 GT:AD:DP:GQ:PL 1/1:0,150:150:99:4934,450,0 chr2 29003646 . A G 4259.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.08;SOR=2.284 GT:AD:DP:GQ:PL 1/1:0,125:125:99:4288,375,0 chr2 29003693 . C T 1960.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.50;SOR=4.133 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1989,153,0 chr2 29004258 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 29004342 . A C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 29004393 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 29011088 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 29011119 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 29017139 . T C 4573.77 PASS AC=2;AF=1.00;AN=2;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.54;SOR=0.987 GT:AD:DP:GQ:PL 1/1:0,145:145:99:4602,435,0 chr2 29023067 . G A 1290.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.708;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.697;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.040;SOR=0.588 GT:AD:DP:GQ:PL 0/1:61,57:118:99:1319,0,1611 chr2 29023178 . T C 1378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.690;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=1.565;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.77;ReadPosRankSum=0.640;SOR=0.527 GT:AD:DP:GQ:PL 0/1:51,57:108:99:1407,0,1278 chr2 29024438 . C T 614.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.636;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=5.755;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.18;ReadPosRankSum=-0.182;SOR=0.412 GT:AD:DP:GQ:PL 0/1:34,21:55:99:643,0,1094 chr2 29024748 . G T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr2 29026537 . T G 251.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.181;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.95;ReadPosRankSum=0.152;SOR=0.446 GT:AD:DP:GQ:PL 0/1:13,10:23:99:280,0,394 chr2 29026549 . C T 242.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.758;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.34;ReadPosRankSum=0.709;SOR=0.551 GT:AD:DP:GQ:PL 0/1:16,10:26:99:271,0,521 chr2 29027037 . G C 805.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.380;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.60;ReadPosRankSum=-1.028;SOR=0.761 GT:AD:DP:GQ:PL 0/1:47,29:76:99:834,0,1502 chr2 29027209 . C T 126.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:154,12,0 chr2 29033508 . C T 1395.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.008;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=0.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.086;SOR=0.614 GT:AD:DP:GQ:PL 0/1:73,56:129:99:1424,0,1958 chr2 29033698 . A T 32.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.210;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.28;ReadPosRankSum=0.967;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,3:10:61:61,0,194 chr2 29035808 . T C 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.412;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.87;ReadPosRankSum=-0.856;SOR=1.179 GT:AD:DP:GQ:PL 0/1:7,10:17:99:298,0,207 chr2 29036291 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 29045509 . A C 1476.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.359;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=5.084;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.58;ReadPosRankSum=1.064;SOR=1.430 GT:AD:DP:GQ:PL 0/1:33,51:84:99:1505,0,803 chr2 29051838 . C T 2789.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.679;ClippingRankSum=0.000;DP=190;ExcessHet=3.0103;FS=11.033;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.84;ReadPosRankSum=-1.810;SOR=0.454 GT:AD:DP:GQ:PL 0/1:88,100:188:99:2818,0,3426 chr2 29051840 . C T 2311.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.328;ClippingRankSum=0.000;DP=191;ExcessHet=3.0103;FS=12.341;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.23;ReadPosRankSum=1.753;SOR=1.282 GT:AD:DP:GQ:PL 0/1:101,88:189:99:2340,0,3959 chr2 29051854 . A G 7489.77 PASS AC=2;AF=1.00;AN=2;DP=193;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.66;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,192:192:99:7518,583,0 chr2 29051864 . G T 2215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.642;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=2.465;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.25;ReadPosRankSum=2.100;SOR=0.914 GT:AD:DP:GQ:PL 0/1:106,91:197:99:2244,0,2941 chr2 29053074 . A G 91.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:119,9,0 chr2 29062847 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 29070580 . A G 806.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.814;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.596;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.68;ReadPosRankSum=-0.798;SOR=0.313 GT:AD:DP:GQ:PL 0/1:14,27:41:99:835,0,396 chr2 29121261 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 29121544 . T A 2216.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.79;SOR=1.226 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2245,216,0 chr2 29130245 . A G 655.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.45;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,18:18:54:684,54,0 chr2 29132437 . C T 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr2 29132479 . T C 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr2 29133803 . A G 2620.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.76;SOR=2.245 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2649,239,0 chr2 29133862 . T C 1390.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.07;SOR=4.921 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1419,108,0 chr2 29143780 . C T 1861.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.145;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=3.670;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.95;ReadPosRankSum=0.052;SOR=0.981 GT:AD:DP:GQ:PL 0/1:101,69:170:99:1890,0,2856 chr2 29160508 . G A 1312.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.79;SOR=2.012 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1341,111,0 chr2 29192926 . G A 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.75;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 29193500 . G C 10901.77 PASS AC=2;AF=1.00;AN=2;DP=306;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.82;SOR=0.706 GT:AD:DP:GQ:PL 1/1:0,306:306:99:10930,920,0 chr2 29193706 . T C 8388.77 PASS AC=2;AF=1.00;AN=2;DP=250;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.56;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,250:250:99:8417,751,0 chr2 29193749 . G A 2679.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.116;ClippingRankSum=0.000;DP=200;ExcessHet=3.0103;FS=0.526;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=-0.341;SOR=0.623 GT:AD:DP:GQ:PL 0/1:104,95:199:99:2708,0,2874 chr2 29193928 . G A 3801.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.42;SOR=1.188 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3830,362,0 chr2 29194435 . T G 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=-0.253;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr2 29196547 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 29196607 . A G 369.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.46;ReadPosRankSum=-0.959;SOR=1.022 GT:AD:DP:GQ:PL 0/1:8,11:19:99:398,0,277 chr2 29206898 . T C 246.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.68;ReadPosRankSum=0.616;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:275,0,141 chr2 29207022 . G A 2401.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.83;SOR=2.206 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2430,213,0 chr2 29208044 . C T 1286.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.111;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=0.777;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.00;ReadPosRankSum=-1.498;SOR=0.547 GT:AD:DP:GQ:PL 0/1:52,47:99:99:1315,0,1398 chr2 29209910 . T C 2444.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.026;ClippingRankSum=0.000;DP=214;ExcessHet=3.0103;FS=1.711;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.42;ReadPosRankSum=0.228;SOR=0.843 GT:AD:DP:GQ:PL 0/1:122,92:214:99:2473,0,3184 chr2 29210116 . C T 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=-0.319;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr2 29221229 . C T 5307.77 PASS AC=2;AF=1.00;AN=2;DP=160;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.17;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,160:160:99:5336,480,0 chr2 29222247 . C T 1450.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.605;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.99;ReadPosRankSum=0.473;SOR=0.679 GT:AD:DP:GQ:PL 0/1:79,53:132:99:1479,0,2206 chr2 29223116 . G C 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.294;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.91;ReadPosRankSum=0.150;SOR=1.179 GT:AD:DP:GQ:PL 0/1:8,5:13:99:170,0,248 chr2 29223262 . A G 2226.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.057;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=0.855;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.85;ReadPosRankSum=-1.498;SOR=0.870 GT:AD:DP:GQ:PL 0/1:79,71:150:99:2255,0,2363 chr2 29223835 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 29226953 . C T 2013.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.035;ClippingRankSum=0.000;DP=198;ExcessHet=3.0103;FS=9.533;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.17;ReadPosRankSum=-0.510;SOR=0.331 GT:AD:DP:GQ:PL 0/1:108,90:198:99:2042,0,2980 chr2 29227517 . G A 2857.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.253;ClippingRankSum=0.000;DP=217;ExcessHet=3.0103;FS=1.049;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.23;ReadPosRankSum=-1.912;SOR=0.612 GT:AD:DP:GQ:PL 0/1:105,111:216:99:2886,0,2841 chr2 29227739 . G A 405.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.587;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=1.289;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.96;ReadPosRankSum=1.362;SOR=0.385 GT:AD:DP:GQ:PL 0/1:31,20:51:99:434,0,891 chr2 29228488 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 29232150 . C T 283.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.918;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.65;ReadPosRankSum=-0.459;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,10:12:47:312,0,47 chr2 29232401 . A G 4196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.149;ClippingRankSum=0.000;DP=285;ExcessHet=3.0103;FS=1.430;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.73;ReadPosRankSum=1.272;SOR=0.602 GT:AD:DP:GQ:PL 0/1:124,161:285:99:4225,0,3159 chr2 29275344 . A G 6426.77 PASS AC=2;AF=1.00;AN=2;DP=173;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.19;SOR=1.708 GT:AD:DP:GQ:PL 1/1:0,173:173:99:6455,520,0 chr2 29296756 . C T 1077.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.434;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=4.362;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.26;ReadPosRankSum=-1.140;SOR=0.355 GT:AD:DP:GQ:PL 0/1:61,44:105:99:1106,0,2536 chr2 29296765 . C T 1948.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.597;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=5.539;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.56;ReadPosRankSum=0.682;SOR=1.272 GT:AD:DP:GQ:PL 0/1:44,67:111:99:1977,0,1666 chr2 29297219 . G A 1032.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.72;SOR=5.211 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1061,81,0 chr2 29300266 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 29302203 . G C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 29302475 . A G 871.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.05;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:900,60,0 chr2 29302479 . T C 871.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.27;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:900,60,0 chr2 29302788 . C T 420.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.990;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.831;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.04;ReadPosRankSum=-0.465;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,13:20:99:449,0,232 chr2 29311953 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 29318238 . C T 985.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.531;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=4.218;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.33;ReadPosRankSum=0.159;SOR=1.214 GT:AD:DP:GQ:PL 0/1:44,43:87:99:1014,0,1206 chr2 29320797 . T C 5927.77 PASS AC=2;AF=1.00;AN=2;DP=187;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.87;SOR=1.216 GT:AD:DP:GQ:PL 1/1:0,186:186:99:5956,558,0 chr2 29328295 . G A 547.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.009;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.354;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.13;ReadPosRankSum=-0.734;SOR=0.941 GT:AD:DP:GQ:PL 0/1:38,22:60:99:576,0,1129 chr2 29444398 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 29444846 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 29444849 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 29448238 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 29448261 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 29475298 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 29479783 . G A 32.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.92;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:61,0,33 chr2 29520956 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 29531855 . T C 813.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.639;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=3.414;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.71;ReadPosRankSum=-0.405;SOR=1.209 GT:AD:DP:GQ:PL 0/1:46,30:76:99:842,0,1167 chr2 29569350 . A C 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr2 29573587 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 29625905 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 29664412 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 29664506 . T C 47.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:75,6,0 chr2 29695074 . C G 2025.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.69;SOR=1.196 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2054,198,0 chr2 29717663 . A T 4194.77 PASS AC=2;AF=1.00;AN=2;DP=130;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.27;SOR=1.259 GT:AD:DP:GQ:PL 1/1:0,130:130:99:4223,390,0 chr2 29717954 . C T 1223.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.65;SOR=4.680 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1252,96,0 chr2 29758736 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 29826144 . C T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 29846475 . T A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 29853844 . T C 88.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:116,12,0 chr2 29885174 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 29893084 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 29920633 . G C 1996.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.08;SOR=4.534 GT:AD:DP:GQ:PL 1/1:0,51:51:99:2025,153,0 chr2 30036511 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 30127498 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 30158639 . T C 1805.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.886;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=7.208;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.90;ReadPosRankSum=-0.844;SOR=1.350 GT:AD:DP:GQ:PL 0/1:79,61:140:99:1834,0,2422 chr2 30211074 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 30230373 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 30234695 . A G 605.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.996;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=7.712;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.42;ReadPosRankSum=0.309;SOR=2.200 GT:AD:DP:GQ:PL 0/1:23,19:42:99:634,0,608 chr2 30249577 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 30257894 . G C 125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.97;ReadPosRankSum=0.967;SOR=0.527 GT:AD:DP:GQ:PL 0/1:2,5:7:62:154,0,62 chr2 30302026 . G T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 30459494 . G A 848.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.102;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=1.070;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.48;ReadPosRankSum=-0.109;SOR=0.919 GT:AD:DP:GQ:PL 0/1:37,31:68:99:877,0,999 chr2 30459604 . A T 1575.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.513;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.79;ReadPosRankSum=-1.124;SOR=0.646 GT:AD:DP:GQ:PL 0/1:77,69:146:99:1604,0,2020 chr2 30525507 . T G 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=0.497;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:137,0,209 chr2 30552433 . G A 255.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.198;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.27;ReadPosRankSum=-0.531;SOR=1.445 GT:AD:DP:GQ:PL 0/1:5,9:14:99:284,0,167 chr2 30568286 . A G 287.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.066;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.70;ReadPosRankSum=0.044;SOR=0.368 GT:AD:DP:GQ:PL 0/1:10,11:21:99:316,0,320 chr2 30585977 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.49;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 30585979 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 30605926 . G A 1066.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.222;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=2.062;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.04;ReadPosRankSum=-1.840;SOR=0.454 GT:AD:DP:GQ:PL 0/1:37,39:76:99:1095,0,1010 chr2 30647923 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 30647929 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 30697427 . A T 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr2 30732288 . A G 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.732;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr2 30732310 . A G 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.736;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.60;ReadPosRankSum=0.119;SOR=0.569 GT:AD:DP:GQ:PL 0/1:7,6:13:99:179,0,252 chr2 30732662 . C A 2582.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.11;SOR=1.966 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2611,234,0 chr2 30734460 . A G 866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.664;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=2.829;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.67;ReadPosRankSum=0.247;SOR=1.094 GT:AD:DP:GQ:PL 0/1:65,35:100:99:895,0,1709 chr2 30736396 . G T 8654.77 PASS AC=2;AF=1.00;AN=2;DP=261;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.16;SOR=1.800 GT:AD:DP:GQ:PL 1/1:0,261:261:99:8683,782,0 chr2 30738156 . C G 3230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.596;ClippingRankSum=0.000;DP=215;ExcessHet=3.0103;FS=2.779;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.03;ReadPosRankSum=-0.695;SOR=0.951 GT:AD:DP:GQ:PL 0/1:108,107:215:99:3259,0,3354 chr2 30738780 . C T 122.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.35;ReadPosRankSum=-0.414;SOR=0.330 GT:AD:DP:GQ:PL 0/1:3,5:8:99:151,0,101 chr2 30741766 . G A 585.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.785;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.83;ReadPosRankSum=2.284;SOR=0.752 GT:AD:DP:GQ:PL 0/1:18,19:37:99:614,0,606 chr2 30743821 . G A 260.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.38;ReadPosRankSum=0.623;SOR=0.818 GT:AD:DP:GQ:PL 0/1:7,8:15:99:289,0,247 chr2 30743871 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 30745362 . A G 1969.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.384;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.61;ReadPosRankSum=-1.116;SOR=0.657 GT:AD:DP:GQ:PL 0/1:123,82:205:99:1998,0,3318 chr2 30745982 . C T 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=1.068;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,187 chr2 30746519 . G A 77.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.751;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.64;ReadPosRankSum=-0.508;SOR=1.179 GT:AD:DP:GQ:PL 0/1:5,4:9:99:106,0,114 chr2 30746602 . T C 237.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:266,24,0 chr2 30753192 . C T 4224.77 PASS AC=2;AF=1.00;AN=2;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.75;SOR=1.027 GT:AD:DP:GQ:PL 1/1:0,129:129:99:4253,387,0 chr2 30754207 . G A 2582.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.70;SOR=1.166 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2611,268,0 chr2 30754488 . C T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.46;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 30758074 . C T 1864.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.72;SOR=2.107 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1893,171,0 chr2 30762908 . G C 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr2 30762963 . C T 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.82;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 30763779 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-1.036;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 30764123 . G T 5569.77 PASS AC=2;AF=1.00;AN=2;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.76;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,170:170:99:5598,509,0 chr2 30777504 . G C 1287.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.367;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=4.965;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.33;ReadPosRankSum=0.532;SOR=1.609 GT:AD:DP:GQ:PL 0/1:44,40:84:99:1316,0,1381 chr2 30779264 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 30779355 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 30783373 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 30787010 . T C 301.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:330,27,0 chr2 30787111 . G C 814.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.902;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=5.588;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.05;ReadPosRankSum=0.984;SOR=1.735 GT:AD:DP:GQ:PL 0/1:32,26:58:99:843,0,1024 chr2 30787346 . C T 2153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.471;ClippingRankSum=0.000;DP=189;ExcessHet=3.0103;FS=0.587;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=1.537;SOR=0.776 GT:AD:DP:GQ:PL 0/1:108,81:189:99:2182,0,3027 chr2 30945614 . A T 468.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.159;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=3.174;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.74;ReadPosRankSum=-0.864;SOR=2.564 GT:AD:DP:GQ:PL 0/1:14,14:28:99:497,0,432 chr2 30955543 . G A 2671.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.374;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.09;ReadPosRankSum=-1.308;SOR=0.741 GT:AD:DP:GQ:PL 0/1:72,94:166:99:2700,0,1963 chr2 30966091 . C T 1910.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.41;SOR=3.570 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1939,159,0 chr2 31009236 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 31009317 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 31009418 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 31010370 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 31033654 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 31033713 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 31040567 . C A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 31078768 . G T 695.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.139;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.80;ReadPosRankSum=0.515;SOR=0.269 GT:AD:DP:GQ:PL 0/1:17,20:37:99:724,0,567 chr2 31137814 . T A 1083.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.631;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.26;ReadPosRankSum=0.596;SOR=1.002 GT:AD:DP:GQ:PL 0/1:41,35:76:99:1112,0,1390 chr2 31174466 . A C 341.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.080;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.99;ReadPosRankSum=-0.895;SOR=0.387 GT:AD:DP:GQ:PL 0/1:7,11:18:99:370,0,234 chr2 31178424 . A C 4275.77 PASS AC=2;AF=1.00;AN=2;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.15;SOR=1.241 GT:AD:DP:GQ:PL 1/1:0,129:129:99:4304,387,0 chr2 31183092 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 31183093 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 31187842 . C T 2871.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.23;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2900,285,0 chr2 31191941 . C G 4690.77 PASS AC=2;AF=1.00;AN=2;DP=148;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.69;SOR=1.103 GT:AD:DP:GQ:PL 1/1:0,148:148:99:4719,444,0 chr2 31192965 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 31193101 . T C 1547.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.62;SOR=4.073 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1576,123,0 chr2 31193347 . T C 5320.77 PASS AC=2;AF=1.00;AN=2;DP=164;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.44;SOR=1.339 GT:AD:DP:GQ:PL 1/1:0,164:164:99:5349,492,0 chr2 31193439 . C T 2893.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.52;SOR=5.042 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2922,196,0 chr2 31193443 . A G 2893.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.75;SOR=5.010 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2922,196,0 chr2 31193451 . C G 2578.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.88;SOR=4.731 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2607,175,0 chr2 31193552 . C T 261.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.78;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:290,21,0 chr2 31197068 . A G 188.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.335;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.16;ReadPosRankSum=0.191;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:217,0,152 chr2 31197619 . T C 1085.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.84;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1114,90,0 chr2 31199482 . T C 2975.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.089;ClippingRankSum=0.000;DP=250;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.90;ReadPosRankSum=0.883;SOR=0.698 GT:AD:DP:GQ:PL 0/1:132,118:250:99:3004,0,3431 chr2 31200256 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 31201546 . T C 446.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.37;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,13:13:39:475,39,0 chr2 31202019 . C T 3226.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.118;ClippingRankSum=0.000;DP=251;ExcessHet=3.0103;FS=3.474;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.86;ReadPosRankSum=-1.568;SOR=0.572 GT:AD:DP:GQ:PL 0/1:125,126:251:99:3255,0,3477 chr2 31202917 . A G 358.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.62;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,11:11:33:387,33,0 chr2 31205675 . A G 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=0.303;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:218,0,176 chr2 31234951 . T C 1207.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.472;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.77;ReadPosRankSum=0.893;SOR=0.841 GT:AD:DP:GQ:PL 0/1:34,38:72:99:1236,0,1067 chr2 31235115 . T C 313.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:342,27,0 chr2 31239507 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 31244213 . G A 385.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.226;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=1.922;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.86;ReadPosRankSum=1.075;SOR=0.307 GT:AD:DP:GQ:PL 0/1:16,14:30:99:414,0,494 chr2 31244485 . T A 1674.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.185;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=3.892;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.60;ReadPosRankSum=0.596;SOR=1.016 GT:AD:DP:GQ:PL 0/1:92,66:158:99:1703,0,2580 chr2 31257485 . C T 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=-0.792;SOR=0.446 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,112 chr2 31261468 . G A 2862.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.919;ClippingRankSum=0.000;DP=203;ExcessHet=3.0103;FS=6.865;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.17;ReadPosRankSum=0.235;SOR=0.347 GT:AD:DP:GQ:PL 0/1:101,101:202:99:2891,0,3005 chr2 31266099 . C T 383.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.425;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=4.266;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.99;ReadPosRankSum=-0.249;SOR=0.191 GT:AD:DP:GQ:PL 0/1:19,13:32:99:412,0,629 chr2 31266861 . T C 228.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.80;ReadPosRankSum=-1.248;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:257,0,134 chr2 31268602 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 31285416 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr2 31316414 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 31316476 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 31323521 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 31328525 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 31342450 . C T 405.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.664;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=1.845;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=0.242;SOR=1.440 GT:AD:DP:GQ:PL 0/1:16,15:31:99:434,0,426 chr2 31344432 . T G 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.10;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr2 31344877 . T C 3583.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.13;SOR=1.587 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3612,315,0 chr2 31345063 . G A 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.35;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 31346508 . C G 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.55;ReadPosRankSum=-0.524;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:66:66,0,69 chr2 31346605 . A G 250.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.948;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=6.412;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.09;ReadPosRankSum=-0.445;SOR=0.132 GT:AD:DP:GQ:PL 0/1:18,13:31:99:279,0,591 chr2 31347203 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 31347510 . T C 2706.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.634;ClippingRankSum=0.000;DP=211;ExcessHet=3.0103;FS=3.976;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.83;ReadPosRankSum=0.133;SOR=0.966 GT:AD:DP:GQ:PL 0/1:109,102:211:99:2735,0,2808 chr2 31347760 . C T 1582.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.608;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=1.406;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.68;ReadPosRankSum=1.560;SOR=1.000 GT:AD:DP:GQ:PL 0/1:32,41:73:99:1611,0,1330 chr2 31347765 . A G 1515.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.518;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.32;ReadPosRankSum=1.922;SOR=0.739 GT:AD:DP:GQ:PL 0/1:28,37:65:99:1544,0,1240 chr2 31347823 . G A 489.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.417;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.26;ReadPosRankSum=-1.529;SOR=1.329 GT:AD:DP:GQ:PL 0/1:8,14:22:99:518,0,256 chr2 31348375 . G C 1737.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.162;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=3.851;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.82;ReadPosRankSum=-1.272;SOR=0.456 GT:AD:DP:GQ:PL 0/1:78,69:147:99:1766,0,2135 chr2 31348920 . A G 873.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.262;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=1.742;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.71;ReadPosRankSum=2.283;SOR=0.939 GT:AD:DP:GQ:PL 0/1:53,37:90:99:902,0,1296 chr2 31349866 . C T 736.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.950;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=3.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.37;ReadPosRankSum=-1.275;SOR=1.426 GT:AD:DP:GQ:PL 0/1:21,24:45:99:765,0,606 chr2 31364369 . G A 788.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.397;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.469;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.78;ReadPosRankSum=0.632;SOR=0.359 GT:AD:DP:GQ:PL 0/1:22,28:50:99:817,0,732 chr2 31365422 . T A 2507.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.674;ClippingRankSum=0.000;DP=178;ExcessHet=3.0103;FS=3.479;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=1.034;SOR=0.464 GT:AD:DP:GQ:PL 0/1:82,96:178:99:2536,0,2209 chr2 31365695 . A C 482.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.236;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.88;ReadPosRankSum=-0.317;SOR=0.941 GT:AD:DP:GQ:PL 0/1:12,15:27:99:511,0,420 chr2 31365711 . A G 364.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.872;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.58;ReadPosRankSum=1.474;SOR=1.751 GT:AD:DP:GQ:PL 0/1:11,11:22:99:393,0,347 chr2 31366788 . T C 736.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.625;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.54;ReadPosRankSum=2.720;SOR=0.914 GT:AD:DP:GQ:PL 0/1:19,23:42:99:765,0,595 chr2 31367290 . A G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.95;ReadPosRankSum=-0.126;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:35:78,0,35 chr2 31367893 . C T 898.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.324;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=3.537;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.54;ReadPosRankSum=-1.068;SOR=1.493 GT:AD:DP:GQ:PL 0/1:17,29:46:99:927,0,436 chr2 31373653 . G A 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.282;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.97;ReadPosRankSum=0.967;SOR=2.093 GT:AD:DP:GQ:PL 0/1:2,7:9:56:253,0,56 chr2 31374089 . G A 1021.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.102;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.25;ReadPosRankSum=0.266;SOR=0.831 GT:AD:DP:GQ:PL 0/1:39,28:67:99:1050,0,2239 chr2 31374097 . T C 945.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.286;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.55;ReadPosRankSum=-0.442;SOR=0.728 GT:AD:DP:GQ:PL 0/1:39,26:65:99:974,0,2246 chr2 31376833 . C T 335.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.230;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.65;ReadPosRankSum=1.511;SOR=0.914 GT:AD:DP:GQ:PL 0/1:8,10:18:99:364,0,248 chr2 31377280 . T C 603.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.143;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=3.174;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.08;ReadPosRankSum=-1.413;SOR=0.307 GT:AD:DP:GQ:PL 0/1:28,22:50:99:632,0,917 chr2 31387095 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 31387127 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 31387445 . C G 176.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.24;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:205,15,0 chr2 31388163 . G A 1148.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.73;SOR=2.910 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1177,87,0 chr2 31388501 . T C 622.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.92;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:651,48,0 chr2 31399599 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 31411099 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 31516895 . G C 144.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:173,15,0 chr2 31557721 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 31578363 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 31580605 . A G 738.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.79;SOR=3.716 GT:AD:DP:GQ:PL 1/1:0,20:20:60:767,60,0 chr2 31580636 . G C 1129.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.46;SOR=3.477 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1158,93,0 chr2 31580756 . C T 1079.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.368;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.59;ReadPosRankSum=-0.981;SOR=0.662 GT:AD:DP:GQ:PL 0/1:34,40:74:99:1108,0,927 chr2 31580962 . C G 992.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.21;SOR=2.468 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1021,84,0 chr2 31591128 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 31651423 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 32022873 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 32072167 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 32092750 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 32114947 . A G 196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.737;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.57;ReadPosRankSum=0.659;SOR=0.593 GT:AD:DP:GQ:PL 0/1:9,8:17:99:225,0,322 chr2 32128119 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 32144832 . T C 1482.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.48;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1511,111,0 chr2 32154594 . A G 570.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.367;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.78;ReadPosRankSum=1.491;SOR=1.519 GT:AD:DP:GQ:PL 0/1:6,18:24:99:599,0,178 chr2 32177567 . C T 403.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.24;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:48:432,48,0 chr2 32193739 . T A 685.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.17;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,22:22:66:714,66,0 chr2 32201753 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 32204428 . A T 377.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.33;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:406,30,0 chr2 32207128 . A C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 32207509 . C T 132.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:160,12,0 chr2 32207525 . A T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.82;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 32209632 . A G 1058.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.36;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1087,90,0 chr2 32209800 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 32216616 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 32235279 . A G 480.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.76;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:509,39,0 chr2 32240960 . A G 1394.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.44;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1423,129,0 chr2 32250040 . G A 4801.77 PASS AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.58;SOR=0.991 GT:AD:DP:GQ:PL 1/1:0,143:143:99:4830,429,0 chr2 32251321 . T G 11984.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.916;ClippingRankSum=0.000;DP=356;ExcessHet=3.0103;FS=3.501;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=33.67;ReadPosRankSum=0.368;SOR=0.588 GT:AD:DP:GQ:PL 1/1:1,355:356:99:12013,1027,0 chr2 32251923 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 32254898 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 32256726 . T A 2741.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.94;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2770,187,0 chr2 32278457 . T C 167.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.98;ReadPosRankSum=0.132;SOR=0.473 GT:AD:DP:GQ:PL 0/1:8,6:14:99:196,0,292 chr2 32341386 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 32341387 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 32341390 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 32348736 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 32348770 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 32395820 . G A 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.253;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr2 32441990 . C A 556.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.78;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:585,39,0 chr2 32441993 . T A 556.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.58;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:585,39,0 chr2 32442325 . T C 756.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.139;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=0.917;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.81;ReadPosRankSum=-0.574;SOR=0.562 GT:AD:DP:GQ:PL 0/1:42,28:70:99:785,0,1204 chr2 32442494 . A G 460.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.671;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=6.911;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.80;ReadPosRankSum=-0.120;SOR=1.802 GT:AD:DP:GQ:PL 0/1:30,17:47:99:489,0,771 chr2 32463533 . A C 253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.502;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.52;ReadPosRankSum=-2.019;SOR=1.179 GT:AD:DP:GQ:PL 0/1:5,8:13:99:282,0,170 chr2 32481511 . T A 717.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.19;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,19:19:57:746,57,0 chr2 32487978 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 32487992 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 32487994 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 32488639 . A T 934.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.457;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=4.622;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.98;ReadPosRankSum=1.700;SOR=0.904 GT:AD:DP:GQ:PL 0/1:34,38:72:99:963,0,795 chr2 32493782 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 32524813 . C T 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.92;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr2 32524823 . C T 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.29;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr2 32524826 . A T 283.80 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.77;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:21:312,21,0 chr2 32524836 . T C 283.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.05;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:312,21,0 chr2 32597890 . G A 626.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.431;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.61;ReadPosRankSum=0.185;SOR=0.693 GT:AD:DP:GQ:PL 0/1:26,28:54:99:655,0,685 chr2 32623787 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 32630548 . A G 864.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.60;SOR=4.003 GT:AD:DP:GQ:PL 1/1:0,23:23:69:893,69,0 chr2 32635348 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 32644776 . C T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 32664509 . A G 382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.229;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=5.932;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=-0.653;SOR=2.448 GT:AD:DP:GQ:PL 0/1:18,12:30:99:411,0,559 chr2 32701840 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 32701881 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 32731306 . T C 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.67;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr2 32731308 . T C 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr2 32733957 . T C 3487.77 PASS AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.86;SOR=1.679 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3516,309,0 chr2 32736624 . C T 2347.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.93;SOR=2.904 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2376,195,0 chr2 32736678 . T A 4060.77 PASS AC=2;AF=1.00;AN=2;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.41;SOR=2.073 GT:AD:DP:GQ:PL 1/1:0,118:118:99:4089,354,0 chr2 32736999 . T C 639.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.04;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:668,48,0 chr2 32758459 . C T 3711.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.14;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3740,336,0 chr2 32817661 . C T 442.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.680;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.81;ReadPosRankSum=0.511;SOR=0.416 GT:AD:DP:GQ:PL 0/1:13,15:28:99:471,0,422 chr2 32925322 . C T 6076.77 PASS AC=2;AF=1.00;AN=2;DP=180;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=2.076 GT:AD:DP:GQ:PL 1/1:0,180:180:99:6105,540,0 chr2 32925611 . C T 8000.77 PASS AC=2;AF=1.00;AN=2;DP=232;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.49;SOR=2.202 GT:AD:DP:GQ:PL 1/1:0,232:232:99:8029,697,0 chr2 32925653 . A G 4359.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.48;SOR=2.546 GT:AD:DP:GQ:PL 1/1:0,122:122:99:4388,367,0 chr2 32925865 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 32947295 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 32947612 . G A 526.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.410;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.16;ReadPosRankSum=-0.253;SOR=0.560 GT:AD:DP:GQ:PL 0/1:12,17:29:99:555,0,380 chr2 32948636 . G A 1065.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.963;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=7.931;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.32;ReadPosRankSum=1.231;SOR=1.556 GT:AD:DP:GQ:PL 0/1:43,37:80:99:1094,0,1248 chr2 32948983 . C T 1043.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.065;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.10;ReadPosRankSum=-0.387;SOR=0.697 GT:AD:DP:GQ:PL 0/1:52,42:94:99:1072,0,1410 chr2 33021424 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 33110441 . C G 1247.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.84;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1276,113,0 chr2 33134390 . C T 990.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.305;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.48;ReadPosRankSum=0.591;SOR=0.660 GT:AD:DP:GQ:PL 0/1:29,35:64:99:1019,0,822 chr2 33135059 . A G 344.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.98;ReadPosRankSum=-1.228;SOR=1.473 GT:AD:DP:GQ:PL 0/1:5,10:15:99:373,0,164 chr2 33135118 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 33142651 . C T 32.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.92;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:61,0,33 chr2 33167844 . G A 1018.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.110;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=1.880;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=0.298;SOR=0.453 GT:AD:DP:GQ:PL 0/1:41,39:80:99:1047,0,1112 chr2 33182119 . T C 808.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.97;ReadPosRankSum=-0.940;SOR=0.495 GT:AD:DP:GQ:PL 0/1:20,25:45:99:837,0,634 chr2 33182218 . G A 1312.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.263;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=1.508;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.52;ReadPosRankSum=0.613;SOR=0.903 GT:AD:DP:GQ:PL 0/1:55,59:114:99:1341,0,1275 chr2 33182435 . G A 180.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.352;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=-0.526;SOR=0.082 GT:AD:DP:GQ:PL 0/1:7,8:15:99:209,0,247 chr2 33187010 . G A 2388.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.117;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=3.465;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.13;ReadPosRankSum=-0.693;SOR=0.470 GT:AD:DP:GQ:PL 0/1:104,93:197:99:2417,0,2920 chr2 33187275 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 33188573 . G T 841.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.024;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=9.144;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.505;SOR=0.136 GT:AD:DP:GQ:PL 0/1:23,31:54:99:870,0,706 chr2 33188882 . G A 1392.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.542;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=5.062;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.78;ReadPosRankSum=1.255;SOR=1.349 GT:AD:DP:GQ:PL 0/1:37,46:83:99:1421,0,921 chr2 33188942 . T A 978.73 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.45;SOR=3.321 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1016,111,0 chr2 33217482 . G A 1147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.855;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=9.652;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.35;ReadPosRankSum=-1.204;SOR=1.718 GT:AD:DP:GQ:PL 0/1:47,39:86:99:1176,0,1318 chr2 33221956 . G A 186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.207;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=-0.349;SOR=1.863 GT:AD:DP:GQ:PL 0/1:6,6:12:99:215,0,180 chr2 33222135 . C T 1175.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.353;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.19;ReadPosRankSum=0.192;SOR=0.684 GT:AD:DP:GQ:PL 0/1:81,47:128:99:1204,0,2305 chr2 33278318 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 33281290 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 33281296 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 33300299 . C T 287.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.387;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=1.499;SOR=1.460 GT:AD:DP:GQ:PL 0/1:11,9:20:99:316,0,395 chr2 33300315 . A C 1102.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.62;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1131,84,0 chr2 33301315 . T G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 33315071 . G A 1612.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.00;SOR=3.209 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1641,135,0 chr2 33315181 . G A 4079.77 PASS AC=2;AF=1.00;AN=2;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.14;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,131:131:99:4108,393,0 chr2 33341090 . T A 95.28 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.05;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:9:123,9,0 chr2 33343046 . A G 1829.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.646;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.48;ReadPosRankSum=0.588;SOR=0.710 GT:AD:DP:GQ:PL 0/1:57,54:111:99:1858,0,1995 chr2 33343070 . G A 1269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.439;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=1.162;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.95;ReadPosRankSum=1.289;SOR=1.022 GT:AD:DP:GQ:PL 0/1:34,33:67:99:1298,0,1463 chr2 33343124 . T C 937.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.73;SOR=3.690 GT:AD:DP:GQ:PL 1/1:0,27:27:81:966,81,0 chr2 33360442 . C G 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.566;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,112 chr2 33360729 . T C 8504.77 PASS AC=2;AF=1.00;AN=2;DP=274;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.04;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,274:274:99:8533,822,0 chr2 33361113 . C T 138.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:166,12,0 chr2 33361543 . A G 902.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.918;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=3.764;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.84;ReadPosRankSum=-1.085;SOR=0.863 GT:AD:DP:GQ:PL 0/1:20,37:57:99:931,0,380 chr2 33389120 . C T 3702.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.06;SOR=2.615 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3731,335,0 chr2 33396951 . T C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 33398221 . T C 513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.317;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.35;ReadPosRankSum=0.612;SOR=0.859 GT:AD:DP:GQ:PL 0/1:13,15:28:99:542,0,390 chr2 33398320 . A G 2683.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.491;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.55;ReadPosRankSum=1.058;SOR=0.639 GT:AD:DP:GQ:PL 0/1:51,68:119:99:2712,0,2858 chr2 33398321 . T C 2683.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.469;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=0.721;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.36;ReadPosRankSum=1.216;SOR=0.583 GT:AD:DP:GQ:PL 0/1:51,69:120:99:2712,0,2858 chr2 33398667 . A G 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.484;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr2 33401375 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 33401378 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 33418673 . T G 169.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.903;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=5.229;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.98;ReadPosRankSum=-0.308;SOR=3.383 GT:AD:DP:GQ:PL 0/1:3,7:10:61:198,0,61 chr2 33515351 . C G 368.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.144;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=3.222;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.56;ReadPosRankSum=1.452;SOR=1.911 GT:AD:DP:GQ:PL 0/1:10,11:21:99:397,0,323 chr2 33519891 . C T 1341.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.54;SOR=1.788 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1370,120,0 chr2 33520141 . T C 2763.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.51;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2792,253,0 chr2 33520269 . T C 1151.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.13;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1180,90,0 chr2 33520335 . A G 1612.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.45;SOR=2.252 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1641,134,0 chr2 33521775 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 33522218 . G A 343.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.78;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:372,27,0 chr2 33523771 . A G 765.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.65;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,19:19:57:794,57,0 chr2 33539219 . T C 4050.77 PASS AC=2;AF=1.00;AN=2;DP=130;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.16;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,130:130:99:4079,390,0 chr2 33539434 . T C 286.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.19;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:315,21,0 chr2 33539436 . C G 286.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.61;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:315,21,0 chr2 33539533 . G T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 33539642 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 33539650 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 33539797 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 33559094 . G A 5388.77 PASS AC=2;AF=1.00;AN=2;DP=165;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.66;SOR=0.889 GT:AD:DP:GQ:PL 1/1:0,165:165:99:5417,495,0 chr2 33559433 . G A 848.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.60;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,23:23:69:877,69,0 chr2 33586449 . C G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr2 33589523 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 33602067 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 33632169 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 33658170 . A G 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=-0.573;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:137,0,216 chr2 33726955 . C A 1464.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.04;SOR=5.031 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1493,114,0 chr2 33726988 . C G 1007.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.972;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.50;ReadPosRankSum=-0.558;SOR=0.660 GT:AD:DP:GQ:PL 0/1:33,32:65:99:1036,0,1022 chr2 33727346 . T C 7538.77 PASS AC=2;AF=1.00;AN=2;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.42;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,219:219:99:7567,658,0 chr2 33727389 . C G 10025.77 PASS AC=2;AF=1.00;AN=2;DP=301;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.31;SOR=0.952 GT:AD:DP:GQ:PL 1/1:0,301:301:99:10054,903,0 chr2 33727928 . C G 238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.660;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.71;ReadPosRankSum=-0.955;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,8:11:92:267,0,92 chr2 33727946 . G T 160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.86;ReadPosRankSum=-0.921;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,6:9:98:189,0,98 chr2 33728043 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 33747020 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 33747023 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 33776331 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 33776335 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 33794742 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 33798147 . A T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 33800628 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 33811351 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 33811360 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 33814416 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 33840016 . A C 64.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.489;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.80;MQRankSum=-1.741;QD=4.63;ReadPosRankSum=0.078;SOR=0.184 GT:AD:DP:GQ:PL 0/1:11,3:14:93:93,0,467 chr2 33840017 . G C 64.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.489;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.80;MQRankSum=-1.741;QD=4.63;ReadPosRankSum=0.000;SOR=0.184 GT:AD:DP:GQ:PL 0/1:11,3:14:93:93,0,467 chr2 33840022 . G A 67.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.699;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.47;MQRankSum=-1.097;QD=6.16;ReadPosRankSum=-1.184;SOR=0.346 GT:AD:DP:GQ:PL 0/1:8,3:11:96:96,0,411 chr2 33840030 . T C 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.903;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.31;MQRankSum=-1.036;QD=7.68;ReadPosRankSum=-1.732;SOR=0.169 GT:AD:DP:GQ:PL 0/1:7,3:10:99:105,0,285 chr2 33840038 . T C 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.751;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.12;MQRankSum=-0.967;QD=8.86;ReadPosRankSum=-2.515;SOR=0.223 GT:AD:DP:GQ:PL 0/1:6,3:9:99:108,0,243 chr2 33840048 . G C 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.57;MQRankSum=-1.465;QD=5.40;ReadPosRankSum=-1.465;SOR=0.368 GT:AD:DP:GQ:PL 0/1:6,1:7:66:66,0,246 chr2 33840262 . G A 64.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.340;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=6.358;MLEAC=1;MLEAF=0.500;MQ=57.65;MQRankSum=-4.813;QD=2.59;ReadPosRankSum=-2.010;SOR=0.884 GT:AD:DP:GQ:PL 0/1:22,3:25:93:93,0,1038 chr2 33840313 . A G 604.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.626;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=8.511;MLEAC=1;MLEAF=0.500;MQ=54.73;MQRankSum=-6.850;QD=11.86;ReadPosRankSum=-0.789;SOR=0.955 GT:AD:DP:GQ:PL 0/1:33,18:51:99:633,0,1333 chr2 33840318 . T A 601.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.118;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=7.915;MLEAC=1;MLEAF=0.500;MQ=54.94;MQRankSum=-7.005;QD=11.35;ReadPosRankSum=-0.179;SOR=0.999 GT:AD:DP:GQ:PL 0/1:35,18:53:99:630,0,1371 chr2 33840338 . T G 724.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.256;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=5.637;MLEAC=1;MLEAF=0.500;MQ=54.08;MQRankSum=-7.108;QD=13.18;ReadPosRankSum=0.902;SOR=1.376 GT:AD:DP:GQ:PL 0/1:35,20:55:99:753,0,1406 chr2 33840347 . C A 740.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.785;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=3.735;MLEAC=1;MLEAF=0.500;MQ=53.69;MQRankSum=-7.354;QD=12.56;ReadPosRankSum=1.639;SOR=1.255 GT:AD:DP:GQ:PL 0/1:37,22:59:99:769,0,1462 chr2 33840373 . A C 759.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.110;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=5.174;MLEAC=1;MLEAF=0.500;MQ=54.48;MQRankSum=-7.918;QD=11.34;ReadPosRankSum=2.747;SOR=1.307 GT:AD:DP:GQ:PL 0/1:45,22:67:99:788,0,1823 chr2 33840374 . T C 759.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.110;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=5.174;MLEAC=1;MLEAF=0.500;MQ=54.48;MQRankSum=-7.918;QD=11.34;ReadPosRankSum=2.890;SOR=1.307 GT:AD:DP:GQ:PL 0/1:45,22:67:99:788,0,1823 chr2 33840420 . A G 381.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.457;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=4.010;MLEAC=1;MLEAF=0.500;MQ=55.42;MQRankSum=-7.589;QD=6.26;ReadPosRankSum=-1.992;SOR=1.424 GT:AD:DP:GQ:PL 0/1:43,18:61:99:410,0,1311 chr2 33840444 . T A 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.341;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=6.122;MLEAC=1;MLEAF=0.500;MQ=57.08;MQRankSum=-7.377;QD=2.05;ReadPosRankSum=-1.031;SOR=1.542 GT:AD:DP:GQ:PL 0/1:49,7:56:99:143,0,2331 chr2 33840449 . T G 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.334;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=1.576;MLEAC=1;MLEAF=0.500;MQ=56.97;MQRankSum=-7.309;QD=2.90;ReadPosRankSum=-1.504;SOR=0.828 GT:AD:DP:GQ:PL 0/1:48,7:55:99:188,0,2307 chr2 33840456 . A G 123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.994;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.91;MQRankSum=-7.240;QD=2.29;ReadPosRankSum=-2.229;SOR=0.910 GT:AD:DP:GQ:PL 0/1:47,7:54:99:152,0,2268 chr2 33840746 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 33894177 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 33903656 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 33903658 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 33914962 . A G 129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.120;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=6.455;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.42;ReadPosRankSum=-0.431;SOR=2.245 GT:AD:DP:GQ:PL 0/1:3,6:9:65:158,0,65 chr2 33915007 . G A 202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.549;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=7.782;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.53;ReadPosRankSum=0.319;SOR=1.414 GT:AD:DP:GQ:PL 0/1:2,7:9:56:231,0,56 chr2 33915055 . G T 186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.191;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=1.621;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,8:12:97:215,0,97 chr2 33915290 . G A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,115 chr2 33926793 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 33973283 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 34001548 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 34008740 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 34009275 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 34009297 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 34024937 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 34111525 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 34111544 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 34114520 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 34142655 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 34154956 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=1.036;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,158 chr2 34154957 . G C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=1.645;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,158 chr2 34184007 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 34432953 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 34526699 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 34526736 . A C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 34724924 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 34724943 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 34824928 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 35174631 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 35456473 . A G 171.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.48;ReadPosRankSum=-0.489;SOR=0.595 GT:AD:DP:GQ:PL 0/1:1,7:8:18:200,0,18 chr2 35471546 . C T 660.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.807;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=3.878;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.24;ReadPosRankSum=0.300;SOR=1.382 GT:AD:DP:GQ:PL 0/1:26,28:54:99:689,0,534 chr2 35477827 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 35656297 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 35709925 . C T 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,81 chr2 35709998 . G A 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=1.150;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,73 chr2 35730303 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 35766036 . T C 132.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:160,12,0 chr2 35766048 . G T 132.03 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.02;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:12:160,12,0 chr2 35784055 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.11;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:90,6,0 chr2 35784059 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 35784073 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 35812257 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 36342902 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 36378161 . G A 843.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.074;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=2.175;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.23;ReadPosRankSum=-0.540;SOR=1.014 GT:AD:DP:GQ:PL 0/1:39,30:69:99:872,0,1115 chr2 36378442 . A G 1416.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.923;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.01;ReadPosRankSum=0.437;SOR=0.626 GT:AD:DP:GQ:PL 0/1:62,56:118:99:1445,0,1726 chr2 36452203 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 36464808 . A C 318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.217;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.81;ReadPosRankSum=0.749;SOR=0.404 GT:AD:DP:GQ:PL 0/1:16,11:27:99:347,0,555 chr2 36477001 . C T 4320.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.54;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,137:137:99:4349,410,0 chr2 36479278 . C G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 36479368 . G C 559.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=0.386;SOR=0.446 GT:AD:DP:GQ:PL 0/1:23,17:40:99:588,0,834 chr2 36479804 . C T 1035.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.074;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.86;ReadPosRankSum=0.969;SOR=0.762 GT:AD:DP:GQ:PL 0/1:28,30:58:99:1064,0,980 chr2 36479894 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.91;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 36512410 . T C 1939.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.80;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1968,183,0 chr2 36529145 . T C 3234.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=1.122 GT:AD:DP:GQ:PL 1/1:0,98:98:99:3263,294,0 chr2 36537259 . A G 124.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.489;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=0.319;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:153,0,102 chr2 36555743 . G A 1196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.423;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=8.623;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=-0.471;SOR=1.594 GT:AD:DP:GQ:PL 0/1:62,43:105:99:1225,0,1649 chr2 36579527 . T C 35.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.96;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:18:64,0,18 chr2 36581207 . C T 658.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.936;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=2.026;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.38;ReadPosRankSum=0.842;SOR=1.697 GT:AD:DP:GQ:PL 0/1:14,20:34:99:687,0,380 chr2 36581589 . T G 874.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.677;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=2.945;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.94;ReadPosRankSum=0.524;SOR=0.414 GT:AD:DP:GQ:PL 0/1:50,38:88:99:903,0,1194 chr2 36583443 . T C 856.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.694;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=2.232;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.79;ReadPosRankSum=-0.857;SOR=1.022 GT:AD:DP:GQ:PL 0/1:35,32:67:99:885,0,1037 chr2 36635135 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 36635145 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 36635148 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 36649192 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 36649195 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 36668294 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 36702644 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 36702654 . T C 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr2 36702771 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 36716195 . C G 1262.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.40;SOR=2.964 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1291,105,0 chr2 36716276 . T C 2533.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2562,233,0 chr2 36754775 . G C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 36759406 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 36767296 . A C 1198.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.84;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1227,99,0 chr2 36773654 . C G 167.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.98;ReadPosRankSum=-0.599;SOR=0.473 GT:AD:DP:GQ:PL 0/1:8,6:14:99:196,0,292 chr2 36774427 . C T 1514.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.60;SOR=1.775 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1543,128,0 chr2 36783431 . G A 4208.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.50;SOR=0.783 GT:AD:DP:GQ:PL 1/1:0,138:138:99:4237,414,0 chr2 36797933 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 36797971 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 36800972 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 36849872 . C A 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 36860940 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 36862885 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 36867802 . A G 1292.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.53;SOR=1.845 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1321,123,0 chr2 36867996 . G C 218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=-1.087;SOR=0.582 GT:AD:DP:GQ:PL 0/1:8,7:15:99:247,0,289 chr2 36869827 . C T 377.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.42;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:406,30,0 chr2 36869866 . T C 82.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.69;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:111,0,30 chr2 36874047 . A C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 36883902 . T A 395.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.018;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.99;ReadPosRankSum=0.917;SOR=0.668 GT:AD:DP:GQ:PL 0/1:20,16:36:99:424,0,557 chr2 36968465 . G A 798.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.202;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=5.356;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.36;ReadPosRankSum=-1.318;SOR=1.911 GT:AD:DP:GQ:PL 0/1:26,26:52:99:827,0,755 chr2 37000401 . A T 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,184 chr2 37007376 . T C 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.335;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=0.175;SOR=2.179 GT:AD:DP:GQ:PL 0/1:5,6:11:99:218,0,132 chr2 37013907 . G A 934.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.149;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=1.723;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.50;ReadPosRankSum=0.756;SOR=0.608 GT:AD:DP:GQ:PL 0/1:50,39:89:99:963,0,1310 chr2 37020872 . T C 278.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.165;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.96;ReadPosRankSum=2.012;SOR=0.582 GT:AD:DP:GQ:PL 0/1:17,11:28:99:307,0,509 chr2 37027872 . G A 1152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.851;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=5.166;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.02;ReadPosRankSum=0.000;SOR=0.128 GT:AD:DP:GQ:PL 0/1:13,35:48:99:1181,0,399 chr2 37032497 . G T 352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.909;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.03;ReadPosRankSum=0.874;SOR=0.693 GT:AD:DP:GQ:PL 0/1:11,11:22:99:381,0,392 chr2 37037792 . A T 308.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.003;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.65;ReadPosRankSum=1.433;SOR=0.569 GT:AD:DP:GQ:PL 0/1:15,14:29:99:346,0,528 chr2 37063516 . A G 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.126;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 37065747 . T G 1094.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.007;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.87;ReadPosRankSum=-1.853;SOR=0.683 GT:AD:DP:GQ:PL 0/1:29,40:69:99:1123,0,754 chr2 37070186 . C G 472.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.774;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.77;ReadPosRankSum=-0.094;SOR=1.112 GT:AD:DP:GQ:PL 0/1:16,16:32:99:501,0,466 chr2 37075747 . C T 329.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.160;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.36;ReadPosRankSum=-1.211;SOR=0.793 GT:AD:DP:GQ:PL 0/1:9,10:19:99:358,0,306 chr2 37079200 . G A 2662.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.70;SOR=0.791 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2691,252,0 chr2 37090726 . C T 964.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.46;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,28:28:84:993,84,0 chr2 37090898 . A G 115.94 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.19;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:14:144,14,0 chr2 37115313 . T C 1984.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.22;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2013,174,0 chr2 37125357 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 37141309 . T C 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 37148789 . G A 428.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.084;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.046;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.42;ReadPosRankSum=0.055;SOR=0.333 GT:AD:DP:GQ:PL 0/1:5,16:21:99:457,0,146 chr2 37149148 . G A 539.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.034;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.064;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.00;ReadPosRankSum=1.182;SOR=0.936 GT:AD:DP:GQ:PL 0/1:30,24:54:99:568,0,821 chr2 37157140 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 37175127 . C G 200.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.589;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.730;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.56;ReadPosRankSum=-0.061;SOR=1.483 GT:AD:DP:GQ:PL 0/1:14,7:21:99:229,0,453 chr2 37175230 . A G 395.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.230;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=1.254;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.89;ReadPosRankSum=0.048;SOR=0.437 GT:AD:DP:GQ:PL 0/1:23,17:40:99:424,0,629 chr2 37179501 . A G 892.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.612;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=1.800;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.217;SOR=0.914 GT:AD:DP:GQ:PL 0/1:42,38:80:99:921,0,1239 chr2 37179537 . C G 915.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.070;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.17;ReadPosRankSum=0.349;SOR=0.706 GT:AD:DP:GQ:PL 0/1:43,39:82:99:944,0,1164 chr2 37179618 . T C 424.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.914;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.62;ReadPosRankSum=-1.491;SOR=0.582 GT:AD:DP:GQ:PL 0/1:24,16:40:99:453,0,695 chr2 37179664 . A G 235.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.25;ReadPosRankSum=-0.129;SOR=0.250 GT:AD:DP:GQ:PL 0/1:15,8:23:99:264,0,556 chr2 37179723 . A G 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=2.021;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:218,0,176 chr2 37183173 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 37183394 . C T 1279.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.597;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=1.673;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.43;ReadPosRankSum=-0.853;SOR=0.957 GT:AD:DP:GQ:PL 0/1:61,51:112:99:1308,0,1697 chr2 37183721 . G A 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=0.566;SOR=2.303 GT:AD:DP:GQ:PL 0/1:6,4:10:99:137,0,186 chr2 37184660 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 37187288 . A C 571.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.757;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=4.378;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.00;ReadPosRankSum=1.617;SOR=0.241 GT:AD:DP:GQ:PL 0/1:29,23:52:99:600,0,851 chr2 37188353 . G C 1239.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.54;SOR=4.680 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1268,96,0 chr2 37211850 . G A 272.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.194;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.05;ReadPosRankSum=1.710;SOR=0.368 GT:AD:DP:GQ:PL 0/1:6,10:16:99:301,0,168 chr2 37217668 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 37220322 . A G 146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.701;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.78;ReadPosRankSum=0.514;SOR=0.368 GT:AD:DP:GQ:PL 0/1:9,6:15:99:175,0,352 chr2 37220330 . T A 550.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.00;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:40:579,40,0 chr2 37220332 . T A 550.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.96;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:40:579,40,0 chr2 37220334 . T A 231.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.512;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.49;ReadPosRankSum=0.125;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,8:16:99:260,0,251 chr2 37220801 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 37227624 . A G 617.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.785;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=3.226;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.82;ReadPosRankSum=-0.774;SOR=1.103 GT:AD:DP:GQ:PL 0/1:51,28:79:99:646,0,1454 chr2 37228889 . C T 2388.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.85;SOR=1.673 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2417,225,0 chr2 37231568 . G A 6299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.069;ClippingRankSum=0.000;DP=500;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.62;ReadPosRankSum=-0.155;SOR=0.670 GT:AD:DP:GQ:PL 0/1:250,249:499:99:6328,0,6406 chr2 37241421 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 37246512 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 37247971 . C G 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr2 37253106 . A G 307.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=-0.155;SOR=0.317 GT:AD:DP:GQ:PL 0/1:17,10:27:99:336,0,629 chr2 37256636 . T A 220.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=31.54;SOR=2.584 GT:AD:DP:GQ:PL 0/1:1,6:7:24:249,0,24 chr2 37259384 . A G 468.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.74;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:497,36,0 chr2 37267448 . A G 199.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.329;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=7.228;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.32;ReadPosRankSum=1.208;SOR=2.419 GT:AD:DP:GQ:PL 0/1:16,8:24:99:228,0,392 chr2 37272146 . T C 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-0.842;SOR=3.258 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr2 37272263 . C T 70.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.525;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.53;ReadPosRankSum=0.234;SOR=0.527 GT:AD:DP:GQ:PL 0/1:22,6:28:99:99,0,619 chr2 37290902 . G C 634.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.560;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=1.847;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.65;ReadPosRankSum=-0.336;SOR=0.509 GT:AD:DP:GQ:PL 0/1:53,30:83:99:663,0,1419 chr2 37316228 . A G 1746.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.665;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=0.957;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.64;ReadPosRankSum=-0.515;SOR=0.854 GT:AD:DP:GQ:PL 0/1:44,55:99:99:1775,0,1319 chr2 37344609 . G A 849.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.98;SOR=6.273 GT:AD:DP:GQ:PL 1/1:0,22:22:66:878,66,0 chr2 37352794 . C T 1007.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.672;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.60;ReadPosRankSum=0.842;SOR=0.749 GT:AD:DP:GQ:PL 0/1:41,39:80:99:1036,0,1232 chr2 37352828 . C T 1350.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.175;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=2.580;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.28;ReadPosRankSum=-0.392;SOR=1.022 GT:AD:DP:GQ:PL 0/1:58,52:110:99:1379,0,1569 chr2 37368461 . C T 165.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.013;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.72;ReadPosRankSum=-1.318;SOR=0.784 GT:AD:DP:GQ:PL 0/1:13,6:19:99:194,0,384 chr2 37368553 . A C 1165.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.991;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=1.980;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=0.509;SOR=0.455 GT:AD:DP:GQ:PL 0/1:38,46:84:99:1194,0,1165 chr2 37607916 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 37706104 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 37808147 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 37826508 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 37826583 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 37836337 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 37836424 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 37838327 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 37838538 . G C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.68;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 37838543 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.17;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 37838565 . A C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.85;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 37838582 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 37838605 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 37849209 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 37850049 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 37882892 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 37950382 . A C 1504.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1533,120,0 chr2 37951263 . A G 1829.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.00;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1858,181,0 chr2 37964043 . C A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 38070604 . G C 176.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.949;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.78;ReadPosRankSum=-0.009;SOR=2.066 GT:AD:DP:GQ:PL 0/1:9,6:15:99:205,0,297 chr2 38071007 . A G 2449.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.653;ClippingRankSum=0.000;DP=201;ExcessHet=3.0103;FS=1.147;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.19;ReadPosRankSum=0.072;SOR=0.598 GT:AD:DP:GQ:PL 0/1:116,85:201:99:2478,0,3355 chr2 38071060 . G C 3560.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.848;ClippingRankSum=0.000;DP=255;ExcessHet=3.0103;FS=4.262;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.96;ReadPosRankSum=-0.345;SOR=0.487 GT:AD:DP:GQ:PL 0/1:123,132:255:99:3589,0,3182 chr2 38075034 . C A 2443.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.601;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=4.852;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.08;ReadPosRankSum=0.375;SOR=0.817 GT:AD:DP:GQ:PL 0/1:67,85:152:99:2472,0,1798 chr2 38075247 . G C 2608.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.702;ClippingRankSum=0.000;DP=193;ExcessHet=3.0103;FS=3.269;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.52;ReadPosRankSum=-1.040;SOR=0.603 GT:AD:DP:GQ:PL 0/1:90,103:193:99:2637,0,2357 chr2 38075401 . G A 1305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.014;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=10.536;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.93;ReadPosRankSum=-1.699;SOR=1.697 GT:AD:DP:GQ:PL 0/1:53,48:101:99:1334,0,1304 chr2 38084159 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.66;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 38268712 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=1.645;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 38476666 . A G 90.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:118,9,0 chr2 38510587 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 38510596 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 38674410 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 38689764 . T C 677.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.150;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=7.661;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.93;ReadPosRankSum=0.718;SOR=0.199 GT:AD:DP:GQ:PL 0/1:33,29:62:99:706,0,984 chr2 38698566 . G T 218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.63;ReadPosRankSum=-0.077;SOR=0.693 GT:AD:DP:GQ:PL 0/1:7,7:14:99:247,0,250 chr2 38718902 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 38721588 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 38728119 . A C 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr2 38729805 . A G 937.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.758;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=3.014;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.57;ReadPosRankSum=0.065;SOR=1.037 GT:AD:DP:GQ:PL 0/1:61,37:98:99:966,0,1708 chr2 38729913 . T C 434.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.44;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,13:13:39:463,39,0 chr2 38733349 . A G 143.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.998;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.98;ReadPosRankSum=-0.571;SOR=1.371 GT:AD:DP:GQ:PL 0/1:7,5:12:99:172,0,222 chr2 38733785 . G A 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.020;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=-1.130;SOR=1.402 GT:AD:DP:GQ:PL 0/1:8,6:14:99:208,0,258 chr2 38733825 . G A 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr2 38750229 . C T 478.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.533;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=7.834;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.64;ReadPosRankSum=-0.761;SOR=2.093 GT:AD:DP:GQ:PL 0/1:28,17:45:99:507,0,813 chr2 38750260 . T C 363.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.459;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=15.009;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.39;ReadPosRankSum=-0.200;SOR=3.998 GT:AD:DP:GQ:PL 0/1:23,12:35:99:392,0,617 chr2 38750363 . T C 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=0.000;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,224 chr2 38758120 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 38769851 . G A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 38770030 . A G 322.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.643;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=3.628;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.41;ReadPosRankSum=-0.209;SOR=0.991 GT:AD:DP:GQ:PL 0/1:13,13:26:99:351,0,329 chr2 38771734 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 38779461 . T G 4132.77 PASS AC=2;AF=1.00;AN=2;DP=137;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.61;SOR=1.049 GT:AD:DP:GQ:PL 1/1:0,135:135:99:4161,405,0 chr2 38781326 . C T 212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.309;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.52;ReadPosRankSum=0.264;SOR=0.399 GT:AD:DP:GQ:PL 0/1:10,7:17:99:241,0,332 chr2 38798413 . G A 2237.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.463;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=1.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.02;ReadPosRankSum=0.576;SOR=0.559 GT:AD:DP:GQ:PL 0/1:65,84:149:99:2266,0,1682 chr2 38798490 . A G 1355.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.980;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=3.245;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.06;ReadPosRankSum=-1.015;SOR=0.364 GT:AD:DP:GQ:PL 0/1:41,49:90:99:1384,0,1184 chr2 38802932 . C T 1691.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.320;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=2.501;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=-0.438;SOR=0.456 GT:AD:DP:GQ:PL 0/1:55,61:116:99:1720,0,1641 chr2 38803160 . T C 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=-0.751;SOR=1.022 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,189 chr2 38806448 . T C 479.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.479;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=2.210;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.54;ReadPosRankSum=-0.695;SOR=0.199 GT:AD:DP:GQ:PL 0/1:16,17:33:99:508,0,535 chr2 38813703 . G A 501.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.859;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.92;ReadPosRankSum=1.412;SOR=0.836 GT:AD:DP:GQ:PL 0/1:13,15:28:99:530,0,456 chr2 38815497 . G A 1595.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.74;SOR=2.636 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1624,132,0 chr2 38822877 . G T 1473.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=4.021 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1502,120,0 chr2 38822999 . A C 1789.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.500;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=5.059;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.85;ReadPosRankSum=-0.103;SOR=1.100 GT:AD:DP:GQ:PL 0/1:86,65:151:99:1818,0,2371 chr2 38826403 . G C 186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=0.614;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:215,0,214 chr2 38828120 . A T 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.025;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=0.549;SOR=1.911 GT:AD:DP:GQ:PL 0/1:5,5:10:99:167,0,145 chr2 38837352 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 38838507 . C G 46.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:21:75,0,21 chr2 38838587 . C A 198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.522;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=4.349;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.36;ReadPosRankSum=0.906;SOR=0.175 GT:AD:DP:GQ:PL 0/1:18,9:27:99:227,0,568 chr2 38848214 . A C 238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.081;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.324;SOR=0.275 GT:AD:DP:GQ:PL 0/1:16,9:25:99:267,0,527 chr2 38855202 . T C 3172.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.035;ClippingRankSum=0.000;DP=242;ExcessHet=3.0103;FS=4.426;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=0.080;SOR=0.996 GT:AD:DP:GQ:PL 0/1:127,115:242:99:3201,0,3188 chr2 38856670 . T G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 38856898 . T C 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 38857150 . A G 1169.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.246;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=3.892;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.00;ReadPosRankSum=-0.205;SOR=0.852 GT:AD:DP:GQ:PL 0/1:47,43:90:99:1198,0,1138 chr2 38857465 . C G 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.489;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.489;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,173 chr2 38863554 . T C 3151.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.49;SOR=2.006 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3180,291,0 chr2 38863686 . C G 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=0.842;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,142 chr2 38881246 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 38881632 . A G 569.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.402;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=0.264;SOR=0.478 GT:AD:DP:GQ:PL 0/1:26,21:47:99:598,0,791 chr2 38882252 . T G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 38882417 . G A 1176.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.719;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=2.262;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.85;ReadPosRankSum=1.768;SOR=0.913 GT:AD:DP:GQ:PL 0/1:82,51:133:99:1205,0,2094 chr2 38889976 . G A 1657.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.965;ClippingRankSum=0.000;DP=165;ExcessHet=3.0103;FS=0.584;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.11;ReadPosRankSum=-1.000;SOR=0.714 GT:AD:DP:GQ:PL 0/1:96,68:164:99:1686,0,2710 chr2 38890144 . T G 649.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.512;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=3.129;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.56;ReadPosRankSum=0.000;SOR=1.781 GT:AD:DP:GQ:PL 0/1:18,19:37:99:678,0,605 chr2 38937913 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 38951352 . G C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 38952988 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 38957823 . A G 283.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.022;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=8.822;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.51;ReadPosRankSum=1.075;SOR=0.048 GT:AD:DP:GQ:PL 0/1:8,13:21:99:312,0,240 chr2 38957907 . C T 2544.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.39;SOR=2.432 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2573,221,0 chr2 38960049 . T C 6884.77 PASS AC=2;AF=1.00;AN=2;DP=197;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.95;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,197:197:99:6913,591,0 chr2 38960378 . A G 2283.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.11;SOR=1.758 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2312,195,0 chr2 38971825 . A G 1491.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.74;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1520,141,0 chr2 38972130 . T C 495.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.78;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:524,39,0 chr2 38987680 . A C 1301.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.00;SOR=6.994 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1330,96,0 chr2 38997210 . G T 1212.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.67;SOR=2.235 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1241,99,0 chr2 39002323 . T C 40.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.65;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:68,6,0 chr2 39002333 . G A 40.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:68,6,0 chr2 39006359 . G A 746.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.10;SOR=3.160 GT:AD:DP:GQ:PL 1/1:0,21:21:63:775,63,0 chr2 39012431 . G C 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.75;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr2 39034927 . C T 1542.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.28;SOR=2.687 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1571,135,0 chr2 39054589 . G C 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.28;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 39054938 . A G 178.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.00;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:207,15,0 chr2 39100864 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 39100920 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 39151179 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 39178429 . G A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 39179431 . C A 1182.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.79;SOR=2.368 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1211,105,0 chr2 39190698 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 39190719 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 39193436 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 39211334 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 39213586 . G C 2181.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.73;SOR=1.362 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2210,213,0 chr2 39225720 . C T 3885.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=1.082 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3914,375,0 chr2 39251981 . G C 466.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.76;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:495,36,0 chr2 39267056 . C T 1054.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.32;SOR=4.332 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1083,81,0 chr2 39267328 . C G 723.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.71;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:752,54,0 chr2 39267425 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 39267455 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 39267466 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 39267484 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 39280276 . T A 2228.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.96;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2257,216,0 chr2 39286995 . T C 1316.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.35;SOR=1.259 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1345,126,0 chr2 39287063 . G C 631.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.01;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:51:660,51,0 chr2 39292577 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 39299701 . A C 2453.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.06;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2482,237,0 chr2 39326130 . A G 2839.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.63;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2868,246,0 chr2 39331787 . G A 2869.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.19;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2898,276,0 chr2 39337479 . C A 997.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.24;SOR=1.542 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1026,99,0 chr2 39343286 . T C 932.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.54;SOR=6.358 GT:AD:DP:GQ:PL 1/1:0,23:23:69:961,69,0 chr2 39356305 . A G 1813.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=0.884 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1842,165,0 chr2 39448655 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 39504256 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 39556661 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 39716915 . G A 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.91;ReadPosRankSum=0.464;SOR=0.307 GT:AD:DP:GQ:PL 0/1:9,5:14:99:167,0,334 chr2 39736527 . A G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.674;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 39755558 . C G 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-0.241;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr2 39761563 . T C 403.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.655;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.25;ReadPosRankSum=-1.025;SOR=1.292 GT:AD:DP:GQ:PL 0/1:7,12:19:99:432,0,235 chr2 39761664 . C T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 39766027 . T C 988.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.250;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=5.748;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.63;ReadPosRankSum=1.127;SOR=1.362 GT:AD:DP:GQ:PL 0/1:48,37:85:99:1017,0,1185 chr2 39768745 . C T 731.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.008;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.083;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.81;ReadPosRankSum=-0.373;SOR=0.465 GT:AD:DP:GQ:PL 0/1:25,28:53:99:760,0,716 chr2 39768768 . A G 699.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.718;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.238;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.07;ReadPosRankSum=-0.603;SOR=0.425 GT:AD:DP:GQ:PL 0/1:17,24:41:99:728,0,519 chr2 39769317 . C T 98.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.98;ReadPosRankSum=-1.501;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:99:127,0,259 chr2 39779290 . A C 127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.25;ReadPosRankSum=-1.068;SOR=2.494 GT:AD:DP:GQ:PL 0/1:3,4:7:99:156,0,230 chr2 39779302 . C T 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.79;ReadPosRankSum=-0.385;SOR=2.093 GT:AD:DP:GQ:PL 0/1:3,3:6:99:117,0,233 chr2 40006119 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 40035284 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 40072324 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 40115907 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 40139161 . G A 291.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.928;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.34;ReadPosRankSum=-0.054;SOR=0.920 GT:AD:DP:GQ:PL 0/1:24,11:35:99:320,0,681 chr2 40152811 . C T 138.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:166,12,0 chr2 40152831 . G T 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.82;ReadPosRankSum=0.366;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,2:7:69:69,0,204 chr2 40152835 . G T 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.82;ReadPosRankSum=0.303;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,2:7:69:69,0,204 chr2 40164649 . G T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 40165173 . G C 988.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.64;SOR=4.255 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1017,78,0 chr2 40165216 . G A 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.25;ReadPosRankSum=-0.027;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:174,0,217 chr2 40175135 . G A 254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.935;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=6.864;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=-0.417;SOR=3.312 GT:AD:DP:GQ:PL 0/1:9,8:17:99:283,0,257 chr2 40175964 . A G 2542.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.64;SOR=1.320 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2571,247,0 chr2 40177699 . C T 1603.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.12;SOR=2.160 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1632,141,0 chr2 40184716 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.04;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 40184718 . T G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.80;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 40209421 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 40337507 . G A 691.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.387;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=2.919;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.72;ReadPosRankSum=0.394;SOR=0.270 GT:AD:DP:GQ:PL 0/1:27,20:47:99:720,0,1628 chr2 40337515 . C T 613.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.307;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=3.227;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.97;ReadPosRankSum=0.889;SOR=0.235 GT:AD:DP:GQ:PL 0/1:24,17:41:99:642,0,1539 chr2 40380364 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 40486798 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 40597625 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 40597626 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 40630689 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 40680982 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 40680988 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 40941063 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 40941084 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 41157250 . G A 468.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.00;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,13:13:39:497,39,0 chr2 41427214 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 41427223 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 41559938 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr2 41744127 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 41891012 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 41938614 . C T 4135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.755;ClippingRankSum=0.000;DP=210;ExcessHet=3.0103;FS=0.518;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.69;ReadPosRankSum=-1.614;SOR=0.631 GT:AD:DP:GQ:PL 0/1:102,108:210:99:4164,0,5193 chr2 41938617 . C G 4135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.145;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=0.519;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.98;ReadPosRankSum=-1.567;SOR=0.619 GT:AD:DP:GQ:PL 0/1:101,106:207:99:4164,0,5193 chr2 41938808 . T C 904.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.654;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=1.620;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.59;ReadPosRankSum=0.128;SOR=0.292 GT:AD:DP:GQ:PL 0/1:35,27:62:99:933,0,1820 chr2 41938821 . T A 694.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.355;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=7.429;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.79;ReadPosRankSum=0.166;SOR=0.052 GT:AD:DP:GQ:PL 0/1:25,19:44:99:723,0,1538 chr2 41947593 . A G 1309.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.231;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=1.817;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.41;ReadPosRankSum=0.927;SOR=0.951 GT:AD:DP:GQ:PL 0/1:37,48:85:99:1338,0,884 chr2 41992198 . T G 149.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.03;QD=29.98;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:178,15,0 chr2 42046689 . C T 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.92;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:42:70,0,42 chr2 42046700 . C G 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.92;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:42:70,0,42 chr2 42048524 . T C 250.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.392;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.75;ReadPosRankSum=0.860;SOR=1.552 GT:AD:DP:GQ:PL 0/1:8,9:17:99:279,0,251 chr2 42048679 . T C 1196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.504;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=-0.209;SOR=0.776 GT:AD:DP:GQ:PL 0/1:35,44:79:99:1225,0,886 chr2 42054407 . C T 639.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.337;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=7.454;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.33;ReadPosRankSum=-0.462;SOR=0.122 GT:AD:DP:GQ:PL 0/1:22,26:48:99:668,0,669 chr2 42056970 . A T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 42057744 . T C 967.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.525;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.907;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.19;ReadPosRankSum=-1.457;SOR=0.508 GT:AD:DP:GQ:PL 0/1:55,40:95:99:996,0,1638 chr2 42079630 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 42084346 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 42101435 . A G 96.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:125,15,0 chr2 42133891 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 42133894 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 42156305 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 42169582 . A G 2730.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.51;SOR=1.347 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2759,252,0 chr2 42174904 . G T 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr2 42174927 . C G 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr2 42180147 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 42230726 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 42245754 . G A 1122.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.418;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.616;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.71;ReadPosRankSum=-1.602;SOR=0.441 GT:AD:DP:GQ:PL 0/1:26,34:60:99:1151,0,833 chr2 42257567 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 42282878 . A G 6067.77 PASS AC=2;AF=1.00;AN=2;DP=196;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.12;SOR=1.634 GT:AD:DP:GQ:PL 1/1:0,195:195:99:6096,582,0 chr2 42286519 . C G 222.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.85;ReadPosRankSum=1.209;SOR=0.582 GT:AD:DP:GQ:PL 0/1:8,7:15:99:251,0,215 chr2 42288248 . A G 591.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.186;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=3.065;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.22;ReadPosRankSum=1.855;SOR=0.419 GT:AD:DP:GQ:PL 0/1:52,30:82:99:620,0,1381 chr2 42325144 . G C 3073.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.687;ClippingRankSum=0.000;DP=247;ExcessHet=3.0103;FS=1.546;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.623;SOR=0.587 GT:AD:DP:GQ:PL 0/1:132,115:247:99:3102,0,3527 chr2 42326438 . A C 133.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:161,12,0 chr2 42329047 . T C 181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.36;ReadPosRankSum=1.898;SOR=1.002 GT:AD:DP:GQ:PL 0/1:9,7:16:99:210,0,259 chr2 42329550 . G A 637.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.789;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=5.866;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.49;ReadPosRankSum=-0.439;SOR=0.169 GT:AD:DP:GQ:PL 0/1:20,24:44:99:666,0,668 chr2 42329651 . C G 1419.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.606;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.24;ReadPosRankSum=-1.166;SOR=0.766 GT:AD:DP:GQ:PL 0/1:58,58:116:99:1448,0,1489 chr2 42333835 . A G 1590.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.422;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=0.685;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=0.376;SOR=0.585 GT:AD:DP:GQ:PL 0/1:62,58:120:99:1619,0,1704 chr2 42352603 . T C 2354.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.005;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=0.539;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.80;ReadPosRankSum=-1.291;SOR=0.643 GT:AD:DP:GQ:PL 0/1:86,98:184:99:2383,0,2002 chr2 42366133 . A T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 42449712 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr2 42481127 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 42483424 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 42483429 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 42495459 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 42522019 . G C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 42568576 . A C 106.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.83;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:134,9,0 chr2 42568579 . A C 106.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.52;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:134,9,0 chr2 42568587 . T C 106.28 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.33;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:9:134,9,0 chr2 42568814 . T C 479.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.98;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:45:508,45,0 chr2 42580838 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 42583946 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 42583979 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 42584017 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 42609376 . A G 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.38;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr2 42616959 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 42698025 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 42704077 . A C 1581.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.18;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1610,125,0 chr2 42708821 . C T 2782.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.36;SOR=2.642 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2811,243,0 chr2 42708839 . C T 3299.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.35;SOR=2.040 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3328,306,0 chr2 42727569 . A G 105.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.18;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:134,15,0 chr2 42734181 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 42762019 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 42762854 . G T 566.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.447;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=9.503;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.82;ReadPosRankSum=0.168;SOR=2.584 GT:AD:DP:GQ:PL 0/1:23,18:41:99:595,0,655 chr2 42762870 . C A 770.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.438;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=15.183;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.06;ReadPosRankSum=0.142;SOR=2.833 GT:AD:DP:GQ:PL 0/1:34,25:59:99:799,0,890 chr2 42762961 . G C 1866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.111;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=0.617;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.25;ReadPosRankSum=-0.112;SOR=0.793 GT:AD:DP:GQ:PL 0/1:98,68:166:99:1895,0,2810 chr2 42763196 . T G 8743.77 PASS AC=2;AF=1.00;AN=2;DP=255;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.29;SOR=0.766 GT:AD:DP:GQ:PL 1/1:0,255:255:99:8772,766,0 chr2 42763382 . C T 3250.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.650;ClippingRankSum=0.000;DP=270;ExcessHet=3.0103;FS=3.333;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.04;ReadPosRankSum=0.436;SOR=0.904 GT:AD:DP:GQ:PL 0/1:144,126:270:99:3279,0,4116 chr2 42764328 . G C 303.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.25;ReadPosRankSum=0.239;SOR=0.317 GT:AD:DP:GQ:PL 0/1:17,10:27:99:332,0,624 chr2 42769348 . G C 94.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0 chr2 42770474 . G A 2921.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.007;ClippingRankSum=0.000;DP=217;ExcessHet=3.0103;FS=0.527;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.46;ReadPosRankSum=0.002;SOR=0.736 GT:AD:DP:GQ:PL 0/1:110,107:217:99:2950,0,3086 chr2 42770810 . T C 170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.444;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.05;ReadPosRankSum=-0.059;SOR=0.293 GT:AD:DP:GQ:PL 0/1:11,6:17:99:199,0,372 chr2 42783599 . C T 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.389;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=5.219;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.84;ReadPosRankSum=1.201;SOR=0.105 GT:AD:DP:GQ:PL 0/1:6,8:14:99:292,0,174 chr2 42784029 . G T 2679.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.68;SOR=2.084 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2708,246,0 chr2 42784302 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 42786632 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 42788226 . T A 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr2 42788261 . T C 362.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,11:11:33:391,33,0 chr2 42788292 . T C 426.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.18;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,12:12:36:455,36,0 chr2 42788472 . G T 3941.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.38;SOR=2.058 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3970,330,0 chr2 42788564 . T A 2697.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.069;ClippingRankSum=0.000;DP=220;ExcessHet=3.0103;FS=1.657;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=-0.591;SOR=0.820 GT:AD:DP:GQ:PL 0/1:108,111:219:99:2726,0,2588 chr2 42788579 . T C 6856.77 PASS AC=2;AF=1.00;AN=2;DP=229;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.07;SOR=0.842 GT:AD:DP:GQ:PL 1/1:0,228:228:99:6885,684,0 chr2 42788617 . G A 6351.77 PASS AC=2;AF=1.00;AN=2;DP=201;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=1.011 GT:AD:DP:GQ:PL 1/1:0,200:200:99:6380,599,0 chr2 42788762 . G A 1439.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.50;SOR=3.967 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1468,117,0 chr2 42788867 . A G 213.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.97;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:242,18,0 chr2 42791776 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 42792207 . G C 787.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.28;SOR=2.737 GT:AD:DP:GQ:PL 1/1:0,22:22:66:816,66,0 chr2 42792224 . G C 1095.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.25;SOR=2.694 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1124,93,0 chr2 42792590 . A G 3662.77 PASS AC=2;AF=1.00;AN=2;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.91;SOR=3.375 GT:AD:DP:GQ:PL 1/1:0,99:99:99:3691,298,0 chr2 42792668 . C A 348.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.714;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.63;ReadPosRankSum=-0.637;SOR=0.095 GT:AD:DP:GQ:PL 0/1:18,12:30:99:377,0,662 chr2 42797536 . C A 902.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.24;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:84:931,84,0 chr2 42797963 . G A 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.38;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 42798067 . T C 933.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.18;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,32:32:96:962,96,0 chr2 42798282 . T C 33.41 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.38;QD=11.14;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:8:61,8,0 chr2 42798601 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 42808775 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 42824483 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.126;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr2 42824717 . A T 268.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.88;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:30:297,30,0 chr2 42830066 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 42833605 . C G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 42838895 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 42850369 . T C 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 42887350 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 42887356 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 42908675 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 42910978 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 42920878 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 42923760 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.86;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 42923775 . G C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.62;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 42923783 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.19;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 42923784 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.70;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 42923830 . G A 76.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:104,9,0 chr2 42923853 . G A 76.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:104,9,0 chr2 42928403 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 42958733 . T C 170.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.47;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:199,18,0 chr2 42982316 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 43007059 . A G 59.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:87,9,0 chr2 43057294 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 43101392 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 43122077 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 43152764 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 43158125 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 43158552 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 43185975 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 43185979 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 43192354 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 43197311 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 43219445 . C A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.30;ReadPosRankSum=-0.842;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:32:66,0,32 chr2 43219477 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 43222163 . A C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.674;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 43225525 . G A 1502.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.194;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=1.732;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.89;ReadPosRankSum=0.286;SOR=0.810 GT:AD:DP:GQ:PL 0/1:37,52:89:99:1531,0,1006 chr2 43225947 . G A 321.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.049;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.318;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.32;ReadPosRankSum=0.718;SOR=0.260 GT:AD:DP:GQ:PL 0/1:11,10:21:99:350,0,374 chr2 43365187 . T A 49.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:77,6,0 chr2 43397939 . T C 869.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.244;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.53;ReadPosRankSum=-0.545;SOR=0.693 GT:AD:DP:GQ:PL 0/1:26,30:56:99:898,0,743 chr2 43398045 . T A 1647.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.570;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=2.199;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.39;ReadPosRankSum=0.990;SOR=0.898 GT:AD:DP:GQ:PL 0/1:71,62:133:99:1676,0,1810 chr2 43430371 . T A 332.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.840;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=10.098;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.47;ReadPosRankSum=1.040;SOR=3.860 GT:AD:DP:GQ:PL 0/1:14,15:29:99:370,0,439 chr2 43505819 . C T 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.908;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=-0.377;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,8:16:99:218,0,252 chr2 43528071 . C T 441.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.327;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.08;ReadPosRankSum=0.068;SOR=1.402 GT:AD:DP:GQ:PL 0/1:8,14:22:99:470,0,233 chr2 43575122 . C A 697.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.66;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:726,54,0 chr2 43676215 . T C 2263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.428;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=0.601;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.80;ReadPosRankSum=0.460;SOR=0.610 GT:AD:DP:GQ:PL 0/1:67,86:153:99:2292,0,1731 chr2 43676344 . T C 2422.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.12;SOR=2.206 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2451,213,0 chr2 43678737 . A G 143.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.696;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.796;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.58;ReadPosRankSum=0.963;SOR=0.129 GT:AD:DP:GQ:PL 0/1:9,6:15:99:172,0,230 chr2 43692795 . G C 236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.31;ReadPosRankSum=0.674;SOR=2.093 GT:AD:DP:GQ:PL 0/1:2,7:9:54:265,0,54 chr2 43694350 . A T 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.842;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 43697032 . T A 146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=-1.876;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:175,0,218 chr2 43699804 . T A 2910.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.134;ClippingRankSum=0.000;DP=214;ExcessHet=3.0103;FS=0.496;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.60;ReadPosRankSum=-1.029;SOR=0.654 GT:AD:DP:GQ:PL 0/1:105,109:214:99:2939,0,2911 chr2 43700320 . C G 1513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.344;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=3.058;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.30;ReadPosRankSum=-0.531;SOR=0.793 GT:AD:DP:GQ:PL 0/1:71,63:134:99:1542,0,1911 chr2 43704037 . T C 825.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.257;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.45;ReadPosRankSum=-0.543;SOR=0.665 GT:AD:DP:GQ:PL 0/1:42,37:79:99:854,0,1104 chr2 43704182 . G A 374.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.866;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=1.395;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.97;ReadPosRankSum=1.016;SOR=1.042 GT:AD:DP:GQ:PL 0/1:32,15:47:99:403,0,957 chr2 43706215 . C G 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-1.180;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr2 43709813 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 43709835 . A G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 43720621 . T C 552.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.378;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=3.707;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.53;ReadPosRankSum=-1.605;SOR=1.147 GT:AD:DP:GQ:PL 0/1:35,23:58:99:581,0,947 chr2 43726525 . A G 567.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.103;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=5.775;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.32;ReadPosRankSum=-0.611;SOR=0.102 GT:AD:DP:GQ:PL 0/1:12,19:31:99:596,0,408 chr2 43738566 . T C 346.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.837;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=4.993;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=-0.131;SOR=2.093 GT:AD:DP:GQ:PL 0/1:11,12:23:99:375,0,291 chr2 43743113 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 43743114 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 43748946 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 43748949 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 43758801 . C A 355.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.23;ReadPosRankSum=0.533;SOR=1.371 GT:AD:DP:GQ:PL 0/1:14,11:25:99:384,0,510 chr2 43764218 . A C 284.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.326;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.56;ReadPosRankSum=-0.415;SOR=1.329 GT:AD:DP:GQ:PL 0/1:12,9:21:99:313,0,404 chr2 43769939 . T C 48.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:76,6,0 chr2 43774000 . C T 2407.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.187;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=1.426;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.16;ReadPosRankSum=0.373;SOR=0.573 GT:AD:DP:GQ:PL 0/1:66,83:149:99:2436,0,1964 chr2 43776871 . T C 932.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.113;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=1.868;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.38;ReadPosRankSum=1.126;SOR=1.022 GT:AD:DP:GQ:PL 0/1:46,36:82:99:961,0,1130 chr2 43776960 . T G 266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.963;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.88;ReadPosRankSum=1.235;SOR=0.818 GT:AD:DP:GQ:PL 0/1:18,9:27:99:295,0,568 chr2 43783481 . G A 574.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.168;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=1.317;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.68;ReadPosRankSum=-1.455;SOR=1.022 GT:AD:DP:GQ:PL 0/1:22,20:42:99:603,0,554 chr2 43794687 . T A 345.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.356;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=1.413;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.68;ReadPosRankSum=0.229;SOR=1.158 GT:AD:DP:GQ:PL 0/1:30,15:45:99:374,0,867 chr2 43795831 . T C 987.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.399;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=1.070;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.97;ReadPosRankSum=-1.245;SOR=0.478 GT:AD:DP:GQ:PL 0/1:29,37:66:99:1016,0,843 chr2 43800874 . A T 408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.214;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.313;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=-0.123;SOR=0.465 GT:AD:DP:GQ:PL 0/1:19,16:35:99:437,0,484 chr2 43809594 . A C 420.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.128;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.831;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.04;ReadPosRankSum=-0.098;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,13:20:99:449,0,220 chr2 43809774 . T C 839.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.030;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.125;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.55;ReadPosRankSum=0.726;SOR=0.892 GT:AD:DP:GQ:PL 0/1:22,32:54:99:868,0,540 chr2 43813208 . T C 1934.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.264;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=4.161;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.55;ReadPosRankSum=0.516;SOR=0.413 GT:AD:DP:GQ:PL 0/1:65,68:133:99:1963,0,1601 chr2 43850086 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 43872294 . C A 3305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.350;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=0.585;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.05;ReadPosRankSum=-1.452;SOR=0.799 GT:AD:DP:GQ:PL 0/1:90,116:206:99:3334,0,2408 chr2 43872443 . G A 210.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.549;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.56;ReadPosRankSum=0.372;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:239,0,167 chr2 43874255 . A G 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.589;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.75;ReadPosRankSum=0.589;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:170,0,140 chr2 43874399 . C T 2887.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.40;SOR=1.227 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2916,285,0 chr2 43874688 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 43877786 . T C 3881.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.596;ClippingRankSum=0.000;DP=304;ExcessHet=3.0103;FS=3.110;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.90;ReadPosRankSum=0.078;SOR=0.539 GT:AD:DP:GQ:PL 0/1:152,149:301:99:3910,0,4090 chr2 43888961 . C T 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=4.260;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=-0.319;SOR=0.061 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr2 43889697 . C T 1606.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.258;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=2.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.27;ReadPosRankSum=-0.046;SOR=0.489 GT:AD:DP:GQ:PL 0/1:65,66:131:99:1635,0,1825 chr2 43901773 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.674;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 43915950 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 43916077 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 43918235 . G T 1266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.359;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=3.117;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.45;ReadPosRankSum=0.805;SOR=0.402 GT:AD:DP:GQ:PL 0/1:32,45:77:99:1295,0,929 chr2 43925041 . G A 825.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.607;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=3.193;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.63;ReadPosRankSum=-0.779;SOR=1.121 GT:AD:DP:GQ:PL 0/1:34,37:71:99:854,0,830 chr2 43925267 . G T 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.58;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 43945305 . A C 3816.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.53;SOR=1.082 GT:AD:DP:GQ:PL 1/1:0,125:125:99:3845,375,0 chr2 43946283 . T G 780.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.23;SOR=1.893 GT:AD:DP:GQ:PL 1/1:0,25:25:74:809,74,0 chr2 43950315 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 43950809 . T C 138.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:166,12,0 chr2 43959696 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 43960767 . T C 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.11;ReadPosRankSum=0.273;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,8:16:99:286,0,286 chr2 44024330 . T C 394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.083;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=5.747;MLEAC=1;MLEAF=0.500;MQ=53.79;MQRankSum=-5.144;QD=13.16;ReadPosRankSum=0.333;SOR=0.169 GT:AD:DP:GQ:PL 0/1:18,12:30:99:423,0,1184 chr2 44024332 . A G 394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.216;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=5.930;MLEAC=1;MLEAF=0.500;MQ=54.84;MQRankSum=-5.290;QD=12.73;ReadPosRankSum=1.325;SOR=0.457 GT:AD:DP:GQ:PL 0/1:20,11:31:99:423,0,1184 chr2 44024387 . T C 178.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.261;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=1.775;MLEAC=1;MLEAF=0.500;MQ=55.93;MQRankSum=-5.195;QD=6.16;ReadPosRankSum=-1.735;SOR=1.352 GT:AD:DP:GQ:PL 0/1:22,7:29:99:207,0,1517 chr2 44024392 . G A 154.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.839;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=4.410;MLEAC=1;MLEAF=0.500;MQ=56.08;MQRankSum=-5.210;QD=5.34;ReadPosRankSum=-1.392;SOR=1.880 GT:AD:DP:GQ:PL 0/1:23,6:29:99:183,0,1566 chr2 44024399 . A G 148.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.374;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=4.172;MLEAC=1;MLEAF=0.500;MQ=56.34;MQRankSum=-5.403;QD=4.80;ReadPosRankSum=-0.487;SOR=1.659 GT:AD:DP:GQ:PL 0/1:25,6:31:99:177,0,1609 chr2 44024436 . C T 54.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.220;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=2.764;MLEAC=1;MLEAF=0.500;MQ=58.02;MQRankSum=-5.018;QD=2.03;ReadPosRankSum=-2.437;SOR=1.981 GT:AD:DP:GQ:PL 0/1:24,3:27:83:83,0,1354 chr2 44057300 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 44086401 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 44108265 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 44147845 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 44155573 . G T 84.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:112,9,0 chr2 44169096 . T G 134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.282;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.97;ReadPosRankSum=0.549;SOR=0.941 GT:AD:DP:GQ:PL 0/1:2,7:9:63:163,0,63 chr2 44219640 . G A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 44275649 . A C 3476.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.821;ClippingRankSum=0.000;DP=276;ExcessHet=3.0103;FS=1.490;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.60;ReadPosRankSum=0.619;SOR=0.579 GT:AD:DP:GQ:PL 0/1:138,138:276:99:3505,0,3651 chr2 44281696 . G A 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=0.303;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,179 chr2 44285832 . G A 446.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.632;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=2.731;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.51;ReadPosRankSum=-1.627;SOR=1.345 GT:AD:DP:GQ:PL 0/1:29,18:47:99:475,0,821 chr2 44303942 . G T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:65:110,0,65 chr2 44304345 . C T 849.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.259;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.66;ReadPosRankSum=-1.996;SOR=0.596 GT:AD:DP:GQ:PL 0/1:22,29:51:99:878,0,688 chr2 44320435 . G A 1913.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.673;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=3.179;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.28;ReadPosRankSum=0.532;SOR=0.453 GT:AD:DP:GQ:PL 0/1:69,65:134:99:1942,0,2136 chr2 44320770 . T C 175.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.440;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.76;ReadPosRankSum=0.497;SOR=0.340 GT:AD:DP:GQ:PL 0/1:11,7:18:99:204,0,371 chr2 44321143 . T C 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.674;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr2 44321474 . T C 949.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.151;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.02;ReadPosRankSum=-0.280;SOR=0.593 GT:AD:DP:GQ:PL 0/1:41,38:79:99:978,0,1101 chr2 44322065 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 44322090 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 44323151 . A G 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-1.282;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr2 44326595 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 44329159 . T C 250.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.590;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.94;ReadPosRankSum=0.048;SOR=0.919 GT:AD:DP:GQ:PL 0/1:12,9:21:99:279,0,370 chr2 44332816 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 44338308 . A T 157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.855;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.57;ReadPosRankSum=1.211;SOR=0.941 GT:AD:DP:GQ:PL 0/1:17,7:24:99:186,0,501 chr2 44342335 . G A 129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.63;ReadPosRankSum=0.079;SOR=0.193 GT:AD:DP:GQ:PL 0/1:12,5:17:99:158,0,450 chr2 44343637 . C T 603.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.583;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=10.436;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.27;ReadPosRankSum=-0.296;SOR=2.176 GT:AD:DP:GQ:PL 0/1:51,22:73:99:632,0,1356 chr2 44343665 . C A 850.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.246;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=7.311;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.25;ReadPosRankSum=-1.914;SOR=1.497 GT:AD:DP:GQ:PL 0/1:57,35:92:99:879,0,1459 chr2 44346485 . G A 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.000;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr2 44346519 . T C 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=1.282;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:24:152,0,24 chr2 44346532 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 44390185 . T A 406.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.046;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=3.211;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.12;ReadPosRankSum=-0.644;SOR=1.345 GT:AD:DP:GQ:PL 0/1:14,17:31:99:435,0,343 chr2 44393671 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 44558286 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 44574152 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 44631548 . T C 861.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.124;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=0.871;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.14;ReadPosRankSum=-0.109;SOR=0.898 GT:AD:DP:GQ:PL 0/1:47,38:85:99:890,0,1223 chr2 44704381 . C T 547.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.642;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=3.278;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.40;ReadPosRankSum=0.056;SOR=0.385 GT:AD:DP:GQ:PL 0/1:44,30:74:99:576,0,1170 chr2 44715245 . C G 1352.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.74;SOR=1.364 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1381,131,0 chr2 44753980 . T G 1215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.867;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.41;ReadPosRankSum=-0.315;SOR=0.612 GT:AD:DP:GQ:PL 0/1:52,46:98:99:1244,0,1379 chr2 44766403 . A G 1419.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.912;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=-1.023;SOR=0.665 GT:AD:DP:GQ:PL 0/1:38,53:91:99:1448,0,905 chr2 44786399 . T G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 44788897 . G C 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.18;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr2 44819200 . A G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 44826389 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 44833431 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 44943014 . G A 735.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.196;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.745;SOR=0.519 GT:AD:DP:GQ:PL 0/1:21,24:45:99:764,0,674 chr2 44944703 . A G 6685.77 PASS AC=2;AF=1.00;AN=2;DP=222;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.12;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,222:222:99:6714,665,0 chr2 44946533 . A G 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 44958067 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 44958085 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 44961386 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 44961507 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 44975296 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 44982168 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 44982175 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 45006663 . G T 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.465;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.18;ReadPosRankSum=-0.844;SOR=2.494 GT:AD:DP:GQ:PL 0/1:6,9:15:99:331,0,171 chr2 45009664 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 45013609 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 45015552 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 45015584 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 45112007 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 45112539 . A G 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr2 45112559 . T G 104.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:132,9,0 chr2 45131438 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 45131456 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 45162211 . C A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 45169258 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 45169450 . T C 73.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:101,12,0 chr2 45169480 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 45223079 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 45223085 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 45305648 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 45305780 . C T 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-1.834;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,115 chr2 45392848 . T A 1044.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.704;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=1.252;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.93;ReadPosRankSum=-0.391;SOR=0.472 GT:AD:DP:GQ:PL 0/1:36,34:70:99:1073,0,1187 chr2 45392916 . G A 1477.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.883;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=0.658;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.55;ReadPosRankSum=0.292;SOR=0.817 GT:AD:DP:GQ:PL 0/1:63,65:128:99:1506,0,1633 chr2 45413235 . C A 925.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.86;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:93:954,93,0 chr2 45418147 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 45418373 . C T 2796.77 PASS AC=2;AF=1.00;AN=2;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.15;SOR=1.153 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2825,259,0 chr2 45419685 . A G 788.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.599;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=1.048;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.60;ReadPosRankSum=-0.496;SOR=0.924 GT:AD:DP:GQ:PL 0/1:40,28:68:99:817,0,1126 chr2 45498694 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 45546677 . C G 1466.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.35;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1495,108,0 chr2 45546911 . G A 808.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.214;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.25;ReadPosRankSum=0.033;SOR=0.776 GT:AD:DP:GQ:PL 0/1:34,32:66:99:837,0,997 chr2 45547409 . A C 2649.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.54;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2678,252,0 chr2 45553823 . C G 1266.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.16;SOR=1.721 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1295,126,0 chr2 45562606 . T C 373.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.082;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=4.041;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=-1.090;SOR=0.148 GT:AD:DP:GQ:PL 0/1:16,16:32:99:402,0,504 chr2 45574482 . C G 400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.437;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=2.590;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.45;ReadPosRankSum=0.199;SOR=0.157 GT:AD:DP:GQ:PL 0/1:21,14:35:99:429,0,697 chr2 45579795 . A G 470.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.821;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=3.638;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.23;ReadPosRankSum=0.776;SOR=1.508 GT:AD:DP:GQ:PL 0/1:11,18:29:99:499,0,239 chr2 45618346 . A T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 45643755 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 45643763 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 45643882 . C G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 45650229 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 45650417 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 45652471 . A G 1729.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.16;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1758,138,0 chr2 45731883 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 45824437 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 45836873 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 45837718 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 45858617 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 45936061 . T C 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr2 45941790 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 45969245 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 45976657 . G C 583.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.821;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=24.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.89;ReadPosRankSum=-1.099;SOR=4.605 GT:AD:DP:GQ:PL 0/1:54,20:74:99:612,0,1575 chr2 45978786 . A G 99.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.736;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.67;ReadPosRankSum=-0.221;SOR=0.804 GT:AD:DP:GQ:PL 0/1:9,4:13:99:128,0,303 chr2 45980428 . C T 2553.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.706;ClippingRankSum=0.000;DP=165;ExcessHet=3.0103;FS=0.584;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.48;ReadPosRankSum=0.287;SOR=0.631 GT:AD:DP:GQ:PL 0/1:72,93:165:99:2582,0,1955 chr2 45984519 . G A 3297.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.728;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.83;ReadPosRankSum=0.961;SOR=0.673 GT:AD:DP:GQ:PL 0/1:77,119:196:99:3326,0,1993 chr2 45984796 . T C 1075.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.79;SOR=3.407 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1104,90,0 chr2 46001161 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 46004386 . T A 2760.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.87;SOR=1.423 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2789,252,0 chr2 46004903 . A C 574.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.02;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,15:15:45:603,45,0 chr2 46010154 . C T 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr2 46085004 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 46086342 . C T 1098.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.041;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=1.702;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.99;ReadPosRankSum=0.262;SOR=0.479 GT:AD:DP:GQ:PL 0/1:59,41:100:99:1127,0,1648 chr2 46107607 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 46107615 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 46108141 . G T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 46156260 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 46196504 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 46196617 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 46196649 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 46349033 . C G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 46352591 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 46356096 . C A 643.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.95;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,18:18:54:672,54,0 chr2 46356142 . C T 2180.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.08;SOR=2.448 GT:AD:DP:GQ:PL 1/1:0,49:49:99:2209,150,0 chr2 46356454 . G A 921.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.84;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,26:26:78:950,78,0 chr2 46357434 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 46362156 . A G 31.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0 chr2 46368351 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 46409828 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 46423533 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 46446764 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 46453948 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 46465293 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 46479479 . C G 1106.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.07;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1135,84,0 chr2 46480990 . C G 412.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.75;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,13:13:39:441,39,0 chr2 46490951 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 46511752 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 46512018 . A G 4928.77 PASS AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=1.500 GT:AD:DP:GQ:PL 1/1:0,147:147:99:4957,440,0 chr2 46521344 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 46543995 . G C 3643.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.02;SOR=4.571 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3672,285,0 chr2 46572713 . G T 2990.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.82;SOR=1.464 GT:AD:DP:GQ:PL 1/1:0,94:94:99:3019,281,0 chr2 46573011 . C T 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.34;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 46591853 . C T 1228.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.21;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1257,111,0 chr2 46592676 . A G 2551.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.48;SOR=1.949 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2580,222,0 chr2 46614722 . G T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 46615271 . A G 738.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.87;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,20:20:60:767,60,0 chr2 46618710 . A G 1218.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.47;SOR=0.902 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1247,119,0 chr2 46624044 . T A 581.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.97;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,14:14:42:610,42,0 chr2 46632940 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 46642582 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 46651212 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 46651235 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 46657924 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 46677563 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 46698925 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 46699568 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 46699580 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 46740912 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 46757488 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 46759277 . A G 3467.77 PASS AC=2;AF=1.00;AN=2;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.98;QD=32.41;SOR=1.632 GT:AD:DP:GQ:PL 1/1:0,107:107:99:3496,320,0 chr2 46760161 . T G 355.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.18;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:384,30,0 chr2 46814546 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 46817079 . G A 1946.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1975,147,0 chr2 46817138 . C T 1706.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.95;SOR=2.200 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1735,132,0 chr2 46818128 . G A 2580.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.52;SOR=2.043 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2609,231,0 chr2 46818170 . C T 4908.77 PASS AC=2;AF=1.00;AN=2;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.69;SOR=1.462 GT:AD:DP:GQ:PL 1/1:0,108:108:99:4937,334,0 chr2 46818182 . A G 5235.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.10;SOR=1.421 GT:AD:DP:GQ:PL 1/1:0,120:120:99:5264,361,0 chr2 46818511 . T C 91.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:119,9,0 chr2 46821830 . T C 732.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.89;SOR=2.200 GT:AD:DP:GQ:PL 1/1:0,21:21:63:761,63,0 chr2 46822270 . C T 3794.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.88;SOR=2.522 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3823,336,0 chr2 46822314 . A G 2260.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.88;SOR=4.139 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2289,180,0 chr2 46840045 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 46840075 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 46849781 . C T 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.69;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:37:59,0,37 chr2 46849852 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 46853953 . C T 1759.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.097;ClippingRankSum=0.000;DP=165;ExcessHet=3.0103;FS=1.318;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.73;ReadPosRankSum=0.241;SOR=0.861 GT:AD:DP:GQ:PL 0/1:94,70:164:99:1788,0,2571 chr2 46854057 . C G 578.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.820;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.02;ReadPosRankSum=-1.626;SOR=1.702 GT:AD:DP:GQ:PL 0/1:17,17:34:99:607,0,562 chr2 46855905 . A T 2191.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.374;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=2.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.29;ReadPosRankSum=1.864;SOR=0.452 GT:AD:DP:GQ:PL 0/1:51,57:108:99:2220,0,3491 chr2 46857516 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 46857535 . T A 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr2 46858259 . C T 308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.394;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.65;ReadPosRankSum=1.397;SOR=0.772 GT:AD:DP:GQ:PL 0/1:20,12:32:99:337,0,598 chr2 46891342 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.80;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:31:81,0,31 chr2 46891381 . G A 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.10;ReadPosRankSum=0.732;SOR=0.582 GT:AD:DP:GQ:PL 0/1:3,5:8:67:117,0,67 chr2 46891398 . C T 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=-0.431;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:63:120,0,63 chr2 46891460 . T C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.645;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:110,0,34 chr2 46892284 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 46892293 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 46905916 . T C 643.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.995;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=1.058;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.94;ReadPosRankSum=-0.794;SOR=0.527 GT:AD:DP:GQ:PL 0/1:46,26:72:99:672,0,1467 chr2 46906191 . G A 205.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.191;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.83;ReadPosRankSum=-1.270;SOR=1.022 GT:AD:DP:GQ:PL 0/1:12,7:19:99:234,0,410 chr2 46951432 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 46956511 . T C 221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.87;ReadPosRankSum=-0.237;SOR=0.752 GT:AD:DP:GQ:PL 0/1:17,8:25:99:250,0,635 chr2 46957351 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 46958703 . G A 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr2 46965229 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 46965824 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 46965833 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 46974658 . A T 1266.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.39;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1295,144,0 chr2 46974849 . C T 1547.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.51;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1576,122,0 chr2 46975532 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 46980526 . A G 61.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:89,9,0 chr2 46982583 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 46982729 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 46993146 . T G 244.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.64;ReadPosRankSum=-1.920;SOR=1.179 GT:AD:DP:GQ:PL 0/1:14,9:23:99:273,0,481 chr2 46993202 . C T 571.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.266;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.00;ReadPosRankSum=0.094;SOR=0.861 GT:AD:DP:GQ:PL 0/1:29,23:52:99:600,0,817 chr2 46993483 . G A 1799.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.285;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=6.847;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.84;ReadPosRankSum=-0.664;SOR=0.355 GT:AD:DP:GQ:PL 0/1:91,75:166:99:1828,0,2339 chr2 46993645 . G A 491.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.42;ReadPosRankSum=-0.267;SOR=1.508 GT:AD:DP:GQ:PL 0/1:7,14:21:99:520,0,226 chr2 46994554 . A G 1491.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.249;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=7.744;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.43;ReadPosRankSum=-0.316;SOR=1.397 GT:AD:DP:GQ:PL 0/1:66,54:120:99:1520,0,1703 chr2 46994862 . T C 181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.36;ReadPosRankSum=-0.716;SOR=0.473 GT:AD:DP:GQ:PL 0/1:9,7:16:99:210,0,294 chr2 46998047 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 47005909 . G A 4735.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.145;ClippingRankSum=0.000;DP=331;ExcessHet=3.0103;FS=0.895;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.31;ReadPosRankSum=1.736;SOR=0.753 GT:AD:DP:GQ:PL 0/1:159,172:331:99:4764,0,4327 chr2 47006610 . T C 3928.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.279;ClippingRankSum=0.000;DP=326;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=0.525;SOR=0.679 GT:AD:DP:GQ:PL 0/1:182,144:326:99:3957,0,4909 chr2 47011492 . C T 654.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.407;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.919;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=-0.482;SOR=0.269 GT:AD:DP:GQ:PL 0/1:28,22:50:99:683,0,939 chr2 47020447 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 47021587 . A G 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.81;ReadPosRankSum=1.236;SOR=1.609 GT:AD:DP:GQ:PL 0/1:9,8:17:99:331,0,679 chr2 47021588 . T C 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.187;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.707;SOR=0.693 GT:AD:DP:GQ:PL 0/1:9,9:18:99:331,0,679 chr2 47022100 . A G 378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.28;ReadPosRankSum=-0.059;SOR=1.371 GT:AD:DP:GQ:PL 0/1:6,11:17:99:407,0,199 chr2 47023680 . A G 1426.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.235;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=2.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.99;ReadPosRankSum=0.069;SOR=1.134 GT:AD:DP:GQ:PL 0/1:38,46:84:99:1455,0,1103 chr2 47060455 . T G 418.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.99;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:447,33,0 chr2 47074956 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 47086913 . T C 385.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.45;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:414,30,0 chr2 47087353 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 47101626 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 47121208 . C T 5141.77 PASS AC=2;AF=1.00;AN=2;DP=160;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.14;SOR=0.797 GT:AD:DP:GQ:PL 1/1:0,160:160:99:5170,479,0 chr2 47126425 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 47126457 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 47126592 . G A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 47130319 . A G 2627.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.13;SOR=1.550 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2656,231,0 chr2 47153006 . T C 1225.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.291;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=2.940;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.13;ReadPosRankSum=0.211;SOR=0.953 GT:AD:DP:GQ:PL 0/1:37,44:81:99:1254,0,992 chr2 47153166 . C T 522.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.91;ReadPosRankSum=-0.794;SOR=1.136 GT:AD:DP:GQ:PL 0/1:10,15:25:99:551,0,342 chr2 47155075 . C G 3696.77 PASS AC=2;AF=1.00;AN=2;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.92;SOR=2.281 GT:AD:DP:GQ:PL 1/1:0,109:109:99:3725,327,0 chr2 47155440 . C T 237.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.020;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.98;ReadPosRankSum=-1.010;SOR=0.976 GT:AD:DP:GQ:PL 0/1:6,8:14:99:266,0,208 chr2 47155467 . T A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.25;ReadPosRankSum=0.180;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:72:72,0,146 chr2 47160298 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.45;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 47160307 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.62;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 47160308 . G T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.26;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 47160333 . A C 176.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.88;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:205,15,0 chr2 47160349 . T A 233.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.98;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:27:262,27,0 chr2 47160401 . T C 176.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:205,18,0 chr2 47160420 . A G 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr2 47160463 . A G 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.12;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr2 47160502 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 47160534 . A C 178.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.72;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:207,15,0 chr2 47160548 . T G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 47160579 . G C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 47160603 . T A 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=1.282;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr2 47160771 . G T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.83;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=-1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,1149 chr2 47160782 . T C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.83;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=-1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,1149 chr2 47161705 . T C 336.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.603;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.31;ReadPosRankSum=-1.509;SOR=0.260 GT:AD:DP:GQ:PL 0/1:10,12:22:99:365,0,352 chr2 47162203 . A C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.44;ReadPosRankSum=-0.431;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:110,0,30 chr2 47162919 . T C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.524;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 47172462 . A G 616.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.197;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.164;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.28;ReadPosRankSum=-1.240;SOR=0.459 GT:AD:DP:GQ:PL 0/1:35,25:60:99:645,0,995 chr2 47176244 . G T 848.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.346;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.89;ReadPosRankSum=0.731;SOR=0.836 GT:AD:DP:GQ:PL 0/1:27,30:57:99:877,0,752 chr2 47220657 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 47220658 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 47252811 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 47299468 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 47373967 . T C 9045.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.186;ClippingRankSum=0.000;DP=289;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.30;ReadPosRankSum=-1.008;SOR=1.001 GT:AD:DP:GQ:PL 1/1:2,287:289:99:9074,818,0 chr2 47374118 . T C 1926.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.393;ClippingRankSum=0.000;DP=130;ExcessHet=3.0103;FS=3.212;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.82;ReadPosRankSum=0.389;SOR=0.439 GT:AD:DP:GQ:PL 0/1:58,72:130:99:1955,0,1522 chr2 47374268 . A G 751.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.106;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.208;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.92;ReadPosRankSum=2.480;SOR=1.022 GT:AD:DP:GQ:PL 0/1:24,30:54:99:780,0,586 chr2 47377727 . C T 262.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.118;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=4.752;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.46;ReadPosRankSum=0.081;SOR=2.093 GT:AD:DP:GQ:PL 0/1:8,9:17:99:291,0,249 chr2 47379635 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 47385017 . A G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.524;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:56:110,0,56 chr2 47385085 . C T 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.013;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.963;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.91;ReadPosRankSum=-0.784;SOR=1.981 GT:AD:DP:GQ:PL 0/1:10,4:14:99:125,0,259 chr2 47392501 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 47403411 . C G 2760.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=1.730 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2789,240,0 chr2 47403500 . T C 1080.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.01;SOR=3.841 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1109,87,0 chr2 47410008 . A C 626.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.095;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.22;ReadPosRankSum=-1.526;SOR=1.214 GT:AD:DP:GQ:PL 0/1:12,19:31:99:655,0,408 chr2 47416052 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 47416318 . G A 1682.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.361;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=0.642;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.46;ReadPosRankSum=0.375;SOR=0.600 GT:AD:DP:GQ:PL 0/1:66,69:135:99:1711,0,1590 chr2 47429662 . G A 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.792;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr2 47434396 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 47445430 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 47463265 . T C 733.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.353;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.30;ReadPosRankSum=-0.126;SOR=0.693 GT:AD:DP:GQ:PL 0/1:9,20:29:99:762,0,811 chr2 47463269 . A G 676.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.536;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.07;ReadPosRankSum=0.156;SOR=1.127 GT:AD:DP:GQ:PL 0/1:8,17:25:99:705,0,851 chr2 47463272 . T C 658.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.659;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.35;ReadPosRankSum=0.156;SOR=0.622 GT:AD:DP:GQ:PL 0/1:8,17:25:99:687,0,816 chr2 47463981 . G A 101.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:129,12,0 chr2 47466567 . G T 214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.555;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.59;ReadPosRankSum=0.494;SOR=0.275 GT:AD:DP:GQ:PL 0/1:16,9:25:99:243,0,559 chr2 47466820 . G A 701.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.636;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.39;ReadPosRankSum=0.746;SOR=0.602 GT:AD:DP:GQ:PL 0/1:10,20:30:99:730,0,325 chr2 47471169 . A G 775.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.170;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=3.527;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.93;ReadPosRankSum=-2.375;SOR=1.220 GT:AD:DP:GQ:PL 0/1:37,28:65:99:804,0,1029 chr2 47471245 . G A 554.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.390;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=4.125;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.32;ReadPosRankSum=-0.863;SOR=0.293 GT:AD:DP:GQ:PL 0/1:25,24:49:99:583,0,761 chr2 47476240 . C T 688.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.14;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,19:19:56:717,56,0 chr2 47476361 . T C 2473.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.881;ClippingRankSum=0.000;DP=201;ExcessHet=3.0103;FS=2.744;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.37;ReadPosRankSum=0.095;SOR=0.926 GT:AD:DP:GQ:PL 0/1:108,92:200:99:2502,0,2893 chr2 47476746 . G A 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.085;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=0.589;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,157 chr2 47532003 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 47552014 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 47570475 . C T 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.253;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 47591016 . T G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 47592833 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 47658788 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 47768715 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 47783419 . C A 1293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.064;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=8.505;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.62;ReadPosRankSum=-1.248;SOR=1.899 GT:AD:DP:GQ:PL 0/1:54,41:95:99:1322,0,1766 chr2 47783515 . C G 292.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.064;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=1.900;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=0.247;SOR=0.275 GT:AD:DP:GQ:PL 0/1:18,11:29:99:321,0,628 chr2 47789175 . T C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 47789214 . G A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 47790942 . A G 1947.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.253;ClippingRankSum=0.000;DP=182;ExcessHet=3.0103;FS=0.557;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.76;ReadPosRankSum=-0.669;SOR=0.762 GT:AD:DP:GQ:PL 0/1:104,77:181:99:1976,0,2824 chr2 47791175 . T A 506.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.581;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.02;ReadPosRankSum=-0.568;SOR=0.446 GT:AD:DP:GQ:PL 0/1:26,20:46:99:544,0,792 chr2 47795761 . A G 259.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.32;ReadPosRankSum=-0.773;SOR=0.818 GT:AD:DP:GQ:PL 0/1:7,8:15:99:288,0,247 chr2 47795976 . T C 1184.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.270;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.45;ReadPosRankSum=-0.267;SOR=0.700 GT:AD:DP:GQ:PL 0/1:37,45:82:99:1213,0,966 chr2 47798555 . C T 387.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.467;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=4.343;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.51;ReadPosRankSum=-0.538;SOR=1.739 GT:AD:DP:GQ:PL 0/1:18,13:31:99:416,0,524 chr2 47803319 . G C 562.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.682;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=6.835;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.08;ReadPosRankSum=-0.709;SOR=0.119 GT:AD:DP:GQ:PL 0/1:15,20:35:99:591,0,487 chr2 47803699 . A T 2208.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.788;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=6.512;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.27;ReadPosRankSum=0.608;SOR=0.386 GT:AD:DP:GQ:PL 0/1:106,90:196:99:2237,0,2971 chr2 47805173 . G A 348.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.449;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.52;ReadPosRankSum=0.361;SOR=1.371 GT:AD:DP:GQ:PL 0/1:6,11:17:99:377,0,188 chr2 47805474 . G A 57.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.42;ReadPosRankSum=0.531;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:86:86,0,223 chr2 47805798 . T C 453.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.813;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=6.463;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.64;ReadPosRankSum=-0.460;SOR=0.073 GT:AD:DP:GQ:PL 0/1:16,15:31:99:482,0,575 chr2 47806412 . C G 1146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.919;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=1.574;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.24;ReadPosRankSum=-0.104;SOR=0.866 GT:AD:DP:GQ:PL 0/1:54,48:102:99:1175,0,1540 chr2 47808534 . A G 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.75;ReadPosRankSum=0.105;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:98:224,0,98 chr2 48169636 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 48174568 . A G 107.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:135,12,0 chr2 48191097 . G T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr2 48346756 . G C 735.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.836;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=2.176;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.32;ReadPosRankSum=-0.543;SOR=0.437 GT:AD:DP:GQ:PL 0/1:33,32:65:99:764,0,845 chr2 48419354 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 48429297 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 48440625 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 48440744 . T C 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=-0.272;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,4:8:99:109,0,143 chr2 48440788 . G C 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=1.100;SOR=1.447 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr2 48459981 . A T 738.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.270;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=0.948;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.92;ReadPosRankSum=0.008;SOR=0.836 GT:AD:DP:GQ:PL 0/1:34,28:62:99:767,0,1063 chr2 48460418 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 48460718 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 48461905 . T G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 48495616 . T C 1262.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.98;SOR=2.964 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1291,105,0 chr2 48496893 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 48498471 . C T 275.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.184;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.49;ReadPosRankSum=0.766;SOR=1.071 GT:AD:DP:GQ:PL 0/1:15,9:24:99:304,0,452 chr2 48505805 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 48507437 . G A 4042.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.69;SOR=2.342 GT:AD:DP:GQ:PL 1/1:0,120:120:99:4071,360,0 chr2 48507586 . A C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 48511249 . C T 835.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.021;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.99;ReadPosRankSum=0.019;SOR=0.693 GT:AD:DP:GQ:PL 0/1:12,26:38:99:864,0,341 chr2 48511548 . G C 1406.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.50;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1435,114,0 chr2 48521908 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 48521965 . G C 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr2 48522553 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 48528338 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 48530149 . C T 152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.473;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.89;ReadPosRankSum=0.005;SOR=0.495 GT:AD:DP:GQ:PL 0/1:6,5:11:99:181,0,294 chr2 48530444 . G C 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.79;ReadPosRankSum=-1.150;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:105,0,107 chr2 48587777 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 48592058 . A G 755.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.809;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.42;ReadPosRankSum=0.040;SOR=0.714 GT:AD:DP:GQ:PL 0/1:21,28:49:99:784,0,594 chr2 48595401 . T C 339.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.862;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=4.091;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.33;ReadPosRankSum=-0.030;SOR=0.144 GT:AD:DP:GQ:PL 0/1:15,15:30:99:368,0,469 chr2 48601891 . A G 223.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.21;ReadPosRankSum=0.483;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,7:13:99:252,0,211 chr2 48617829 . C G 1458.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.074;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=4.804;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.89;ReadPosRankSum=0.750;SOR=1.094 GT:AD:DP:GQ:PL 0/1:51,54:105:99:1487,0,1440 chr2 48621376 . G C 164.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.550;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.67;ReadPosRankSum=1.754;SOR=1.402 GT:AD:DP:GQ:PL 0/1:13,6:19:99:193,0,417 chr2 48646523 . T C 504.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.667;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=2.931;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.47;ReadPosRankSum=0.586;SOR=0.346 GT:AD:DP:GQ:PL 0/1:24,20:44:99:533,0,702 chr2 48646786 . A G 1116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.181;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=2.768;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.17;ReadPosRankSum=0.464;SOR=1.006 GT:AD:DP:GQ:PL 0/1:57,43:100:99:1145,0,1599 chr2 48671659 . T A 4858.77 PASS AC=2;AF=1.00;AN=2;DP=156;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.15;SOR=0.948 GT:AD:DP:GQ:PL 1/1:0,156:156:99:4887,467,0 chr2 48679486 . T C 1206.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.43;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1235,131,0 chr2 48687549 . A G 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-0.967;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr2 48688732 . A G 1491.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.353;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.94;ReadPosRankSum=0.373;SOR=0.647 GT:AD:DP:GQ:PL 0/1:52,55:107:99:1520,0,1283 chr2 48694236 . T C 446.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.913;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.428;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.96;ReadPosRankSum=0.851;SOR=1.201 GT:AD:DP:GQ:PL 0/1:15,17:32:99:475,0,322 chr2 48694299 . T C 304.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.361;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=7.847;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.47;ReadPosRankSum=1.493;SOR=1.492 GT:AD:DP:GQ:PL 0/1:23,13:36:99:333,0,648 chr2 48698607 . C T 1379.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.692;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.93;ReadPosRankSum=1.597;SOR=0.744 GT:AD:DP:GQ:PL 0/1:87,52:139:99:1408,0,2292 chr2 48713940 . A G 511.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.023;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=2.205;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.26;ReadPosRankSum=-0.546;SOR=1.493 GT:AD:DP:GQ:PL 0/1:8,14:22:99:540,0,523 chr2 48722534 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 48725562 . C G 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.00;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr2 48726070 . C T 179.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:208,15,0 chr2 48726210 . C T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 48729278 . C T 1021.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.887;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=3.375;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.81;ReadPosRankSum=-1.432;SOR=1.157 GT:AD:DP:GQ:PL 0/1:32,42:74:99:1050,0,899 chr2 48729292 . T A 837.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.374;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=0.305;SOR=0.565 GT:AD:DP:GQ:PL 0/1:32,32:64:99:866,0,906 chr2 48729336 . C T 626.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.314;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=1.379;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.24;ReadPosRankSum=-0.556;SOR=0.363 GT:AD:DP:GQ:PL 0/1:20,24:44:99:655,0,601 chr2 48729373 . A G 437.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.095;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=1.779;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.12;ReadPosRankSum=0.464;SOR=0.349 GT:AD:DP:GQ:PL 0/1:14,17:31:99:466,0,417 chr2 48731456 . A G 212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.52;ReadPosRankSum=-0.857;SOR=0.425 GT:AD:DP:GQ:PL 0/1:10,7:17:99:241,0,367 chr2 48732893 . G A 936.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.298;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=0.811;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.02;ReadPosRankSum=-1.002;SOR=0.791 GT:AD:DP:GQ:PL 0/1:46,39:85:99:965,0,1075 chr2 48754925 . G A 77.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=0.000;SOR=1.447 GT:AD:DP:GQ:PL 0/1:1,4:5:27:106,0,27 chr2 48754993 . G A 62.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:90,9,0 chr2 48755219 . G A 165.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.076;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.07;ReadPosRankSum=1.602;SOR=0.399 GT:AD:DP:GQ:PL 0/1:4,7:11:91:194,0,91 chr2 48755346 . T C 707.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.808;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=2.243;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.60;ReadPosRankSum=-0.747;SOR=0.382 GT:AD:DP:GQ:PL 0/1:33,28:61:99:736,0,824 chr2 48755483 . C G 646.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.729;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=2.471;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.98;ReadPosRankSum=-0.529;SOR=0.395 GT:AD:DP:GQ:PL 0/1:29,25:54:99:675,0,861 chr2 48767218 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 48775918 . T A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 48776427 . C T 812.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.545;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.34;ReadPosRankSum=1.308;SOR=1.022 GT:AD:DP:GQ:PL 0/1:27,26:53:99:841,0,909 chr2 48776484 . T G 481.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.27;ReadPosRankSum=0.553;SOR=0.941 GT:AD:DP:GQ:PL 0/1:11,14:25:99:510,0,384 chr2 48850801 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr2 48915259 . C G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 48962782 . C T 3821.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.58;SOR=1.052 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3850,363,0 chr2 48963902 . C T 2777.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.29;SOR=2.162 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2806,243,0 chr2 48968270 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 48973271 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 48973277 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 48973281 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 48988838 . G A 437.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.143;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=5.653;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.24;ReadPosRankSum=-0.371;SOR=2.584 GT:AD:DP:GQ:PL 0/1:10,14:24:99:466,0,272 chr2 48989145 . C T 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=2.057;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr2 48990777 . T G 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.75;ReadPosRankSum=-0.847;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:179,0,140 chr2 49014593 . C A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 49017420 . A G 935.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.737;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=1.916;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.85;ReadPosRankSum=1.875;SOR=0.957 GT:AD:DP:GQ:PL 0/1:59,36:95:99:964,0,1588 chr2 49059927 . G A 226.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.62;ReadPosRankSum=-1.248;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:255,0,134 chr2 49154446 . C T 445.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.244;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=2.013;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=-1.543;SOR=1.588 GT:AD:DP:GQ:PL 0/1:22,15:37:99:474,0,693 chr2 49219035 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 49283034 . A C 90.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.414;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.56;ReadPosRankSum=0.799;SOR=1.022 GT:AD:DP:GQ:PL 0/1:8,4:12:99:119,0,277 chr2 49558424 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 49973972 . A G 4201.77 PASS AC=2;AF=1.00;AN=2;DP=127;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.08;SOR=1.347 GT:AD:DP:GQ:PL 1/1:0,127:127:99:4230,381,0 chr2 49974245 . G A 1825.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.36;SOR=3.080 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1854,144,0 chr2 49974409 . G C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.80;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 50053145 . T C 732.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.36;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,19:19:57:761,57,0 chr2 50053200 . G A 1805.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.59;SOR=2.701 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1834,150,0 chr2 50084550 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 50084555 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 50133467 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 50207603 . C T 617.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.08;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:66:646,66,0 chr2 50207621 . C G 708.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.35;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,25:25:75:737,75,0 chr2 50347347 . A G 1282.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.232;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=3.077;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.74;ReadPosRankSum=0.630;SOR=1.122 GT:AD:DP:GQ:PL 0/1:41,46:87:99:1311,0,1192 chr2 50433847 . A G 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr2 50465220 . C T 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-0.524;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr2 50465422 . A G 1268.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.690;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=5.033;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.82;ReadPosRankSum=0.364;SOR=1.214 GT:AD:DP:GQ:PL 0/1:49,50:99:99:1297,0,1323 chr2 50465681 . T G 753.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=2.737 GT:AD:DP:GQ:PL 1/1:0,22:22:66:782,66,0 chr2 50465802 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 50466225 . A T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.52;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 50506722 . A G 1010.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.59;SOR=2.765 GT:AD:DP:GQ:PL 1/1:0,32:32:94:1039,94,0 chr2 50531519 . T C 1615.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.73;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1644,129,0 chr2 50553081 . T G 217.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.616;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.10;ReadPosRankSum=-1.007;SOR=0.124 GT:AD:DP:GQ:PL 0/1:10,8:18:99:246,0,331 chr2 50630925 . T A 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=0.366;SOR=0.105 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr2 50630969 . T A 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.412;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.197;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.87;ReadPosRankSum=-0.801;SOR=0.283 GT:AD:DP:GQ:PL 0/1:7,10:17:99:298,0,207 chr2 50655015 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 50739023 . G A 403.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.577;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=2.963;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.61;ReadPosRankSum=-0.808;SOR=1.353 GT:AD:DP:GQ:PL 0/1:27,15:42:99:432,0,763 chr2 50739145 . C T 871.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.164;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=2.855;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.26;ReadPosRankSum=-1.398;SOR=1.015 GT:AD:DP:GQ:PL 0/1:48,37:85:99:900,0,1261 chr2 50921734 . T A 152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.323;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.99;ReadPosRankSum=0.834;SOR=0.941 GT:AD:DP:GQ:PL 0/1:9,8:17:99:181,0,223 chr2 50979204 . C G 791.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.675;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.23;ReadPosRankSum=1.377;SOR=0.788 GT:AD:DP:GQ:PL 0/1:25,27:52:99:820,0,718 chr2 51027340 . G A 958.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.070;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=3.974;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-0.420;SOR=0.317 GT:AD:DP:GQ:PL 0/1:23,34:57:99:987,0,675 chr2 51028554 . A G 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-1.368;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,112 chr2 51080440 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 51080452 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 51104019 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 51309516 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 51392172 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 51813704 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 52571528 . G A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.385;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:73:107,0,73 chr2 52571655 . G C 210.90 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.589;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.43;ReadPosRankSum=-0.140;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,8:9:15:239,0,15 chr2 52572436 . A T 2609.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.335;ClippingRankSum=0.000;DP=215;ExcessHet=3.0103;FS=1.049;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.14;ReadPosRankSum=0.362;SOR=0.718 GT:AD:DP:GQ:PL 0/1:110,105:215:99:2638,0,2646 chr2 52572482 . G A 2386.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.120;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=0.536;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.18;ReadPosRankSum=0.822;SOR=0.621 GT:AD:DP:GQ:PL 0/1:99,97:196:99:2415,0,2499 chr2 52572560 . C A 1523.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.774;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.11;ReadPosRankSum=-0.739;SOR=0.744 GT:AD:DP:GQ:PL 0/1:53,55:108:99:1552,0,1566 chr2 52681489 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 53283049 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 53283050 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 53411236 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 53515830 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 53516952 . A G 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr2 53516972 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.05;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 53599641 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 53670895 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 53693794 . G A 130.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.451;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=5.006;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.88;ReadPosRankSum=0.538;SOR=0.045 GT:AD:DP:GQ:PL 0/1:13,6:19:99:159,0,474 chr2 53729843 . C A 386.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.88;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:415,30,0 chr2 53733810 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 53733835 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 53746736 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 53746753 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 53746758 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 53763395 . C T 1532.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.482;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.48;ReadPosRankSum=1.532;SOR=0.793 GT:AD:DP:GQ:PL 0/1:42,57:99:99:1561,0,1117 chr2 53765485 . G C 665.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.410;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.57;ReadPosRankSum=0.790;SOR=0.643 GT:AD:DP:GQ:PL 0/1:37,26:63:99:694,0,880 chr2 53787166 . A G 319.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.202;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=1.922;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.99;ReadPosRankSum=-0.416;SOR=1.508 GT:AD:DP:GQ:PL 0/1:9,11:20:99:348,0,282 chr2 53788839 . A C 40.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:68,6,0 chr2 53788840 . C T 40.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:68,6,0 chr2 53808114 . A G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.000;SOR=2.833 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 53808371 . G C 1404.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.155;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=2.146;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.33;ReadPosRankSum=1.467;SOR=0.781 GT:AD:DP:GQ:PL 0/1:74,62:136:99:1433,0,1767 chr2 53812676 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 53814846 . G T 1655.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.944;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=2.379;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.68;ReadPosRankSum=-0.323;SOR=0.982 GT:AD:DP:GQ:PL 0/1:57,64:121:99:1684,0,1302 chr2 53854786 . T G 1834.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.169;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=0.660;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=0.210;SOR=0.808 GT:AD:DP:GQ:PL 0/1:71,65:136:99:1863,0,2047 chr2 53865847 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 53866819 . G A 1655.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.098;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=0.666;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.25;ReadPosRankSum=-1.795;SOR=0.594 GT:AD:DP:GQ:PL 0/1:60,65:125:99:1684,0,1474 chr2 53874635 . C T 537.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.35;ReadPosRankSum=0.976;SOR=0.756 GT:AD:DP:GQ:PL 0/1:15,16:31:99:566,0,533 chr2 53887727 . T C 271.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.833;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.87;ReadPosRankSum=-0.391;SOR=0.941 GT:AD:DP:GQ:PL 0/1:16,9:25:99:300,0,581 chr2 53888676 . C T 857.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.051;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=2.147;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.80;ReadPosRankSum=0.006;SOR=0.465 GT:AD:DP:GQ:PL 0/1:32,35:67:99:886,0,931 chr2 53888708 . T A 769.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.456;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.903;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.87;ReadPosRankSum=0.935;SOR=0.883 GT:AD:DP:GQ:PL 0/1:40,38:78:99:807,0,1093 chr2 53893048 . G A 406.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.516;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.93;ReadPosRankSum=0.327;SOR=1.739 GT:AD:DP:GQ:PL 0/1:5,12:17:99:435,0,158 chr2 53893683 . G A 2107.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.758 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2136,195,0 chr2 53894823 . C A 248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.087;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.58;ReadPosRankSum=1.267;SOR=2.030 GT:AD:DP:GQ:PL 0/1:7,8:15:99:277,0,209 chr2 53895819 . A G 1257.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.25;SOR=1.730 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1286,117,0 chr2 53898121 . T C 99.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.67;ReadPosRankSum=1.050;SOR=0.446 GT:AD:DP:GQ:PL 0/1:9,4:13:99:128,0,337 chr2 53899904 . C T 2519.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.00;SOR=1.013 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2548,251,0 chr2 53903956 . C T 600.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.381;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.25;ReadPosRankSum=2.337;SOR=1.302 GT:AD:DP:GQ:PL 0/1:10,17:27:99:629,0,304 chr2 53904017 . C T 661.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.673;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=8.802;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.67;ReadPosRankSum=1.735;SOR=2.129 GT:AD:DP:GQ:PL 0/1:39,23:62:99:690,0,1053 chr2 53906501 . G A 380.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.246;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.10;ReadPosRankSum=-0.360;SOR=1.022 GT:AD:DP:GQ:PL 0/1:12,15:27:99:409,0,294 chr2 53908472 . G A 550.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.358;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=1.242;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=1.482;SOR=1.125 GT:AD:DP:GQ:PL 0/1:21,21:42:99:579,0,491 chr2 53921194 . C A 605.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.77;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:634,48,0 chr2 53923100 . A G 906.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.524;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=0.756;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.64;ReadPosRankSum=-0.028;SOR=0.612 GT:AD:DP:GQ:PL 0/1:69,36:105:99:935,0,1783 chr2 53932862 . G A 1711.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.56;SOR=1.848 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1740,153,0 chr2 53932922 . T C 371.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.300;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.87;ReadPosRankSum=1.347;SOR=0.784 GT:AD:DP:GQ:PL 0/1:12,13:25:99:400,0,342 chr2 53934885 . C T 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.15;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr2 53934939 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 53937711 . G T 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=0.589;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,106 chr2 53970692 . C A 824.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.454;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.933;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.15;ReadPosRankSum=-0.083;SOR=0.551 GT:AD:DP:GQ:PL 0/1:39,35:74:99:853,0,1020 chr2 54051406 . G A 288.28 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.567;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.21;ReadPosRankSum=-0.402;SOR=0.399 GT:AD:DP:GQ:PL 0/1:1,10:11:9:316,0,9 chr2 54051448 . C G 318.03 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=31.80;ReadPosRankSum=-1.036;SOR=0.525 GT:AD:DP:GQ:PL 0/1:1,9:10:12:346,0,12 chr2 54051530 . T C 237.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:266,24,0 chr2 54115875 . C A 3949.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.35;SOR=2.163 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3978,345,0 chr2 54115971 . G C 1213.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.16;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1242,90,0 chr2 54134035 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 54135300 . T C 560.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.787;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=1.402;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.49;ReadPosRankSum=1.023;SOR=1.085 GT:AD:DP:GQ:PL 0/1:15,19:34:99:589,0,320 chr2 54158523 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 54198179 . A C 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr2 54198227 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 54255416 . G A 3408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.942;ClippingRankSum=0.000;DP=294;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=0.271;SOR=0.670 GT:AD:DP:GQ:PL 0/1:157,137:294:99:3437,0,4334 chr2 54255827 . C T 4473.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.076;ClippingRankSum=0.000;DP=306;ExcessHet=3.0103;FS=1.926;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.62;ReadPosRankSum=-0.771;SOR=0.588 GT:AD:DP:GQ:PL 0/1:142,164:306:99:4502,0,3741 chr2 54256306 . T C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr2 54267053 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 54267233 . A G 2136.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.80;SOR=2.760 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2165,183,0 chr2 54267311 . G A 1508.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.185;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.23;ReadPosRankSum=0.311;SOR=0.623 GT:AD:DP:GQ:PL 0/1:57,57:114:99:1537,0,1557 chr2 54331270 . G A 754.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.31;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,22:22:66:783,66,0 chr2 54344010 . C T 136.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.01;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:164,12,0 chr2 54360459 . C T 2585.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.78;SOR=1.582 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2614,251,0 chr2 54381746 . C A 736.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.222;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=2.790;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.70;ReadPosRankSum=1.133;SOR=1.284 GT:AD:DP:GQ:PL 0/1:34,24:58:99:765,0,1075 chr2 54407568 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 54529603 . C T 607.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.277;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=1.309;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.58;ReadPosRankSum=-1.746;SOR=1.106 GT:AD:DP:GQ:PL 0/1:15,24:39:99:636,0,374 chr2 54547915 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 54612139 . A G 4481.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.919;ClippingRankSum=0.000;DP=349;ExcessHet=3.0103;FS=1.753;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=1.196;SOR=0.718 GT:AD:DP:GQ:PL 0/1:168,180:348:99:4510,0,4286 chr2 54617774 . G A 432.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.778;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=1.516;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.847;SOR=0.320 GT:AD:DP:GQ:PL 0/1:22,18:40:99:461,0,693 chr2 54626392 . A G 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.619;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.85;ReadPosRankSum=-0.319;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,2:8:59:59,0,192 chr2 54628000 . T C 1929.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.094;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=9.282;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.84;ReadPosRankSum=-0.191;SOR=1.700 GT:AD:DP:GQ:PL 0/1:68,62:130:99:1958,0,1987 chr2 54631374 . C T 5027.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.754;ClippingRankSum=0.000;DP=370;ExcessHet=3.0103;FS=3.927;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.63;ReadPosRankSum=-1.328;SOR=0.730 GT:AD:DP:GQ:PL 0/1:194,175:369:99:5056,0,5630 chr2 54644140 . T A 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.85;ReadPosRankSum=-0.854;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,2:8:59:59,0,227 chr2 54658177 . A T 381.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.126;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.60;ReadPosRankSum=-0.186;SOR=0.776 GT:AD:DP:GQ:PL 0/1:11,12:23:99:410,0,374 chr2 54659210 . G A 2673.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.504;ClippingRankSum=0.000;DP=215;ExcessHet=3.0103;FS=1.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.49;ReadPosRankSum=1.427;SOR=0.559 GT:AD:DP:GQ:PL 0/1:108,106:214:99:2702,0,2845 chr2 54666100 . C T 238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.670;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=3.140;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.05;ReadPosRankSum=0.721;SOR=0.132 GT:AD:DP:GQ:PL 0/1:7,10:17:99:267,0,225 chr2 54710605 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 54806976 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 54813067 . C T 136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.888;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=4.523;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.05;ReadPosRankSum=0.169;SOR=0.061 GT:AD:DP:GQ:PL 0/1:11,6:17:99:165,0,408 chr2 54813289 . A G 6022.77 PASS AC=2;AF=1.00;AN=2;DP=189;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.04;SOR=0.953 GT:AD:DP:GQ:PL 1/1:0,188:188:99:6051,564,0 chr2 54816661 . G C 630.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.829;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.55;ReadPosRankSum=0.388;SOR=0.941 GT:AD:DP:GQ:PL 0/1:15,19:34:99:659,0,520 chr2 54847292 . C A 278.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=-1.091;SOR=0.368 GT:AD:DP:GQ:PL 0/1:14,9:23:99:307,0,516 chr2 54847841 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 54849924 . A G 415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.826;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=-2.150;SOR=0.473 GT:AD:DP:GQ:PL 0/1:18,14:32:99:444,0,643 chr2 54866705 . G A 382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.130;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.752 GT:AD:DP:GQ:PL 0/1:21,14:35:99:411,0,602 chr2 54866722 . C G 454.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.121;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.34;ReadPosRankSum=1.051;SOR=0.798 GT:AD:DP:GQ:PL 0/1:26,18:44:99:483,0,674 chr2 54890941 . T G 239.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.90;ReadPosRankSum=0.804;SOR=0.307 GT:AD:DP:GQ:PL 0/1:14,8:22:99:268,0,519 chr2 54892783 . A G 317.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.965;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.82;ReadPosRankSum=0.190;SOR=0.481 GT:AD:DP:GQ:PL 0/1:13,10:23:99:346,0,462 chr2 54894714 . T A 449.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.826;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=8.783;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.06;ReadPosRankSum=-0.029;SOR=0.053 GT:AD:DP:GQ:PL 0/1:11,17:28:99:478,0,375 chr2 54895452 . A G 1042.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.456;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.20;ReadPosRankSum=0.257;SOR=0.794 GT:AD:DP:GQ:PL 0/1:41,38:79:99:1071,0,1066 chr2 54911135 . G A 552.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.26;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:581,42,0 chr2 54911145 . C T 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.473;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=0.533;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,247 chr2 54911165 . G A 469.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.12;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:498,36,0 chr2 54911242 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 54928414 . C T 2896.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.057;ClippingRankSum=0.000;DP=232;ExcessHet=3.0103;FS=0.480;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.49;ReadPosRankSum=-0.898;SOR=0.653 GT:AD:DP:GQ:PL 0/1:124,108:232:99:2925,0,3472 chr2 54928535 . A G 4060.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.722;ClippingRankSum=0.000;DP=286;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.20;ReadPosRankSum=-0.122;SOR=0.666 GT:AD:DP:GQ:PL 0/1:143,143:286:99:4089,0,3840 chr2 54928820 . C T 1400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.509;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.29;ReadPosRankSum=0.855;SOR=0.639 GT:AD:DP:GQ:PL 0/1:39,47:86:99:1429,0,1093 chr2 54933423 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 54933607 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 54935882 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 54948975 . C T 1420.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.387;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=1.599;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.28;ReadPosRankSum=0.796;SOR=0.911 GT:AD:DP:GQ:PL 0/1:54,53:107:99:1449,0,1444 chr2 54952375 . C A 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.56;ReadPosRankSum=-1.279;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:167,0,256 chr2 54953828 . G A 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.82;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr2 54954214 . T C 735.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.30;ReadPosRankSum=-0.045;SOR=1.352 GT:AD:DP:GQ:PL 0/1:12,21:33:99:764,0,402 chr2 54954245 . G A 458.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.661;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.85;ReadPosRankSum=0.115;SOR=1.329 GT:AD:DP:GQ:PL 0/1:8,14:22:99:487,0,264 chr2 54957644 . A C 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-0.524;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr2 54959092 . T C 1841.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.725;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=6.791;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.73;ReadPosRankSum=3.295;SOR=0.338 GT:AD:DP:GQ:PL 0/1:59,66:125:99:1870,0,1688 chr2 54959257 . A C 1728.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.077;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=1.277;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.87;ReadPosRankSum=-0.154;SOR=0.572 GT:AD:DP:GQ:PL 0/1:90,69:159:99:1757,0,2444 chr2 54959785 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 54960158 . G A 1951.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.981;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=8.734;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.49;ReadPosRankSum=0.263;SOR=1.421 GT:AD:DP:GQ:PL 0/1:54,72:126:99:1980,0,1466 chr2 54961591 . G A 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr2 54962795 . G A 405.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.128;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.23;ReadPosRankSum=-0.980;SOR=0.776 GT:AD:DP:GQ:PL 0/1:12,13:25:99:434,0,392 chr2 54966531 . C G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.48;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 54966661 . G A 726.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.601;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=2.756;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.75;ReadPosRankSum=0.026;SOR=0.317 GT:AD:DP:GQ:PL 0/1:28,29:57:99:755,0,877 chr2 54973902 . C T 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.416;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=1.694;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.35;ReadPosRankSum=1.038;SOR=1.270 GT:AD:DP:GQ:PL 0/1:21,10:31:99:256,0,614 chr2 54987482 . A C 1207.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.882;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.89;ReadPosRankSum=1.013;SOR=0.693 GT:AD:DP:GQ:PL 0/1:30,46:76:99:1236,0,854 chr2 54987776 . C G 380.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.392;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.64;ReadPosRankSum=-1.817;SOR=0.551 GT:AD:DP:GQ:PL 0/1:14,12:26:99:409,0,472 chr2 55002949 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 55002951 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 55031568 . C G 1777.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.156;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=0.716;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.19;ReadPosRankSum=-0.327;SOR=0.609 GT:AD:DP:GQ:PL 0/1:56,61:117:99:1806,0,1637 chr2 55050090 . C T 599.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.442;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.63;ReadPosRankSum=-0.400;SOR=0.892 GT:AD:DP:GQ:PL 0/1:22,22:44:99:628,0,617 chr2 55066523 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 55077322 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 55097769 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 55097824 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 55114816 . T G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 55128833 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 55177789 . C T 721.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.958;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.46;ReadPosRankSum=0.881;SOR=0.617 GT:AD:DP:GQ:PL 0/1:34,29:63:99:750,0,978 chr2 55180323 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 55180618 . C T 4097.77 PASS AC=2;AF=1.00;AN=2;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.01;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,128:128:99:4126,384,0 chr2 55180799 . G A 745.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.73;SOR=3.160 GT:AD:DP:GQ:PL 1/1:0,21:21:63:774,63,0 chr2 55208429 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 55208866 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.863;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.98;ReadPosRankSum=1.489;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:72:72,0,186 chr2 55209798 . G A 1351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.066;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=4.682;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.52;ReadPosRankSum=0.155;SOR=1.269 GT:AD:DP:GQ:PL 0/1:29,44:73:99:1380,0,720 chr2 55209878 . C T 545.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.059;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=5.471;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.41;ReadPosRankSum=0.626;SOR=1.445 GT:AD:DP:GQ:PL 0/1:36,22:58:99:574,0,956 chr2 55212531 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 55212827 . C A 1758.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.49;SOR=2.170 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1787,153,0 chr2 55222120 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.35;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 55224497 . C T 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=-1.645;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr2 55225712 . G C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 55230944 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 55233469 . A T 650.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.45;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,18:18:54:679,54,0 chr2 55233615 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 55234687 . T A 2393.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.92;SOR=1.578 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2422,225,0 chr2 55237196 . G A 247.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.687;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.06;ReadPosRankSum=0.096;SOR=1.022 GT:AD:DP:GQ:PL 0/1:3,10:13:40:276,0,40 chr2 55242979 . C T 431.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.21;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,13:13:39:460,39,0 chr2 55244271 . T C 555.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.69;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:51:584,51,0 chr2 55246235 . A G 191.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.255;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.59;ReadPosRankSum=-0.278;SOR=0.255 GT:AD:DP:GQ:PL 0/1:13,7:20:99:220,0,449 chr2 55246545 . A C 856.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.60;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,22:22:66:885,66,0 chr2 55248863 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 55252886 . A T 53.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:81,9,0 chr2 55253857 . C T 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.28;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 55262493 . T C 377.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.48;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,12:12:36:406,36,0 chr2 55263683 . G T 2185.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.68;SOR=1.385 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2214,206,0 chr2 55280250 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 55291606 . T C 1277.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.53;SOR=2.774 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1306,111,0 chr2 55295286 . A G 2531.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.42;SOR=1.226 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2560,216,0 chr2 55296173 . C A 727.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.26;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,18:18:53:756,53,0 chr2 55299615 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 55299972 . G A 4129.77 PASS AC=2;AF=1.00;AN=2;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.01;SOR=1.241 GT:AD:DP:GQ:PL 1/1:0,129:129:99:4158,387,0 chr2 55301121 . A C 1253.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.99;SOR=1.670 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1282,114,0 chr2 55301378 . A G 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.82;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 55339395 . A C 238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.660;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.71;ReadPosRankSum=0.577;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,8:11:92:267,0,92 chr2 55339816 . T C 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=-0.210;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,106 chr2 55349498 . C T 409.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.630;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.211;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.11;ReadPosRankSum=0.938;SOR=1.000 GT:AD:DP:GQ:PL 0/1:28,17:45:99:438,0,734 chr2 55355548 . A T 1359.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.762;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=3.519;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.45;ReadPosRankSum=-0.327;SOR=0.371 GT:AD:DP:GQ:PL 0/1:40,48:88:99:1388,0,1228 chr2 55362228 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.674;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 55362298 . T A 433.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.614;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=6.805;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.07;ReadPosRankSum=-0.434;SOR=2.235 GT:AD:DP:GQ:PL 0/1:13,14:27:99:462,0,274 chr2 55363881 . T C 306.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.947;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.07;ReadPosRankSum=-1.022;SOR=0.815 GT:AD:DP:GQ:PL 0/1:22,16:38:99:335,0,567 chr2 55372519 . G A 496.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.573;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=6.284;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.56;ReadPosRankSum=0.065;SOR=0.105 GT:AD:DP:GQ:PL 0/1:12,18:30:99:525,0,343 chr2 55412844 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 55419625 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 55435262 . C A 481.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.188;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=3.220;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.17;ReadPosRankSum=1.871;SOR=0.269 GT:AD:DP:GQ:PL 0/1:12,22:34:99:510,0,346 chr2 55435287 . T C 1417.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.23;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1446,102,0 chr2 55533708 . A T 412.74 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.86;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,10:10:30:450,30,0 chr2 55533804 . G T 2039.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.90;SOR=2.019 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2068,186,0 chr2 55535821 . C T 1246.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.97;SOR=1.387 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1275,116,0 chr2 55543914 . C G 555.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.74;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,16:16:48:584,48,0 chr2 55544025 . A G 1737.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.45;SOR=1.123 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1766,177,0 chr2 55558556 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 55569391 . C G 355.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.64;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:384,30,0 chr2 55569408 . A G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.19;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 55573856 . G T 120.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.01;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:148,12,0 chr2 55578036 . A C 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.97;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 55578304 . T C 3014.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.50;SOR=1.364 GT:AD:DP:GQ:PL 1/1:0,90:90:99:3043,270,0 chr2 55578448 . A G 260.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.38;ReadPosRankSum=1.133;SOR=0.818 GT:AD:DP:GQ:PL 0/1:7,8:15:99:289,0,247 chr2 55581833 . C T 362.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,11:11:33:391,33,0 chr2 55584937 . T G 1186.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.32;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1215,93,0 chr2 55598216 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 55616969 . C T 2145.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.60;SOR=8.015 GT:AD:DP:GQ:PL 1/1:0,54:54:99:2174,162,0 chr2 55617309 . T C 5286.77 PASS AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.77;SOR=3.580 GT:AD:DP:GQ:PL 1/1:0,143:143:99:5315,429,0 chr2 55628120 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 55646080 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 55646166 . T A 710.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.90;SOR=1.708 GT:AD:DP:GQ:PL 1/1:0,23:23:69:739,69,0 chr2 55654681 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 55655336 . A C 104.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:132,9,0 chr2 55655356 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 55656182 . G T 329.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.98;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:33:358,33,0 chr2 55661927 . G A 446.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.37;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,13:13:39:475,39,0 chr2 55667112 . T C 2668.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.01;SOR=0.878 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2697,274,0 chr2 55668186 . T C 93.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0 chr2 55671068 . A G 1472.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.34;SOR=1.659 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1501,141,0 chr2 55671155 . C G 1816.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.32;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1845,174,0 chr2 55672093 . A T 680.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.86;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:51:709,51,0 chr2 55673148 . A G 803.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.49;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,24:24:72:832,72,0 chr2 55673324 . A G 301.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:330,27,0 chr2 55675260 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.69;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr2 55675281 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 55681182 . G C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 55682190 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 55684985 . T C 1926.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.22;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1955,174,0 chr2 55687486 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.54;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 55688020 . T A 301.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.60;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:330,24,0 chr2 55693981 . C G 479.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.33;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:508,39,0 chr2 55695795 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 55966774 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 55982744 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 55982809 . T C 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.48;ReadPosRankSum=-0.554;SOR=1.445 GT:AD:DP:GQ:PL 0/1:4,8:12:99:298,0,131 chr2 55983144 . T A 440.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.496;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.49;ReadPosRankSum=-0.162;SOR=1.863 GT:AD:DP:GQ:PL 0/1:5,13:18:99:469,0,147 chr2 55988917 . G A 2760.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=1.872 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2789,253,0 chr2 55988955 . A T 1263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.307;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.04;ReadPosRankSum=-0.445;SOR=0.745 GT:AD:DP:GQ:PL 0/1:54,51:105:99:1292,0,1413 chr2 55989185 . C A 98.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.765;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.97;ReadPosRankSum=0.475;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:127,0,182 chr2 56000641 . G T 1497.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.300;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=1.970;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.71;ReadPosRankSum=-1.710;SOR=1.030 GT:AD:DP:GQ:PL 0/1:37,39:76:99:1526,0,2131 chr2 56000642 . C T 1497.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.166;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=3.158;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.97;ReadPosRankSum=-1.801;SOR=1.088 GT:AD:DP:GQ:PL 0/1:36,39:75:99:1526,0,2131 chr2 56108402 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 56119691 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.41;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 56129323 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 56143744 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 56184682 . C T 417.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.512;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=3.539;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.60;ReadPosRankSum=1.224;SOR=0.231 GT:AD:DP:GQ:PL 0/1:21,15:36:99:446,0,697 chr2 56194837 . C T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 56194888 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 56375983 . C G 1279.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.811;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=2.930;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.33;ReadPosRankSum=0.406;SOR=0.391 GT:AD:DP:GQ:PL 0/1:48,48:96:99:1308,0,1371 chr2 56589223 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 56589233 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 56723140 . A T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.645;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:110,0,34 chr2 56723164 . C T 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:31:115,0,31 chr2 56723257 . G A 118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.241;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.20;ReadPosRankSum=-0.366;SOR=0.941 GT:AD:DP:GQ:PL 0/1:4,5:9:99:147,0,106 chr2 56723277 . G A 77.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.241;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.64;ReadPosRankSum=1.085;SOR=1.179 GT:AD:DP:GQ:PL 0/1:5,4:9:99:106,0,148 chr2 56841558 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 56841562 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 57202788 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 57204487 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 57528803 . A T 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.99;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr2 57528805 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 57765500 . G A 322.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.070;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.17;ReadPosRankSum=-0.433;SOR=0.593 GT:AD:DP:GQ:PL 0/1:4,12:16:85:351,0,85 chr2 58089679 . A G 123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.929;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.16;ReadPosRankSum=0.626;SOR=0.602 GT:AD:DP:GQ:PL 0/1:17,7:24:99:152,0,536 chr2 58123369 . A G 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=-0.034;SOR=0.495 GT:AD:DP:GQ:PL 0/1:9,7:16:99:244,0,328 chr2 58123436 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:72,0,33 chr2 58135026 . G A 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.463;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.96;ReadPosRankSum=1.583;SOR=1.055 GT:AD:DP:GQ:PL 0/1:19,12:31:99:244,0,606 chr2 58154650 . T C 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.334;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.010;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.75;ReadPosRankSum=-1.094;SOR=1.911 GT:AD:DP:GQ:PL 0/1:6,3:9:62:62,0,156 chr2 58161561 . A G 607.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.893;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=10.070;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.16;ReadPosRankSum=0.377;SOR=1.418 GT:AD:DP:GQ:PL 0/1:26,24:50:99:636,0,595 chr2 58165654 . T C 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.450;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=1.462;SOR=0.527 GT:AD:DP:GQ:PL 0/1:18,11:29:99:292,0,562 chr2 58397622 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 58678259 . C G 174.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.618;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.32;ReadPosRankSum=0.788;SOR=0.542 GT:AD:DP:GQ:PL 0/1:13,8:21:99:203,0,445 chr2 58822276 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 59001689 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 59003861 . A C 65.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:93,9,0 chr2 59014301 . A G 1962.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.553;ClippingRankSum=0.000;DP=145;ExcessHet=3.0103;FS=2.239;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.54;ReadPosRankSum=0.609;SOR=0.939 GT:AD:DP:GQ:PL 0/1:70,75:145:99:1991,0,1911 chr2 59014538 . A G 598.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.519;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=1.778;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.92;ReadPosRankSum=1.337;SOR=0.281 GT:AD:DP:GQ:PL 0/1:21,22:43:99:627,0,636 chr2 59043725 . T C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=1.150;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 59120945 . G A 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 59244163 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 59908468 . C T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 60064218 . T A 44.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 60387437 . G A 12680.77 PASS AC=2;AF=1.00;AN=2;DP=333;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.21;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,333:333:99:12709,999,0 chr2 60387442 . A G 4139.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.104;ClippingRankSum=0.000;DP=334;ExcessHet=3.0103;FS=0.396;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.39;ReadPosRankSum=-0.328;SOR=0.667 GT:AD:DP:GQ:PL 0/1:181,153:334:99:4168,0,4908 chr2 60393699 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 60414002 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 60417567 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 60460824 . A G 14860.77 PASS AC=2;AF=1.00;AN=2;DP=451;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.95;SOR=0.978 GT:AD:DP:GQ:PL 1/1:0,451:451:99:14889,1354,0 chr2 60462613 . A G 487.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.84;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:516,42,0 chr2 60493816 . A G 203.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.47;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:232,24,0 chr2 60541843 . G A 823.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.95;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,25:25:75:852,75,0 chr2 60598912 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 60598930 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 60604283 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 60604284 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 60609950 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 60618425 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 60661823 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 60661902 . G C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 60682898 . C T 88.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:116,12,0 chr2 60683035 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 60734983 . T C 1100.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.809;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.818;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.42;ReadPosRankSum=0.914;SOR=0.596 GT:AD:DP:GQ:PL 0/1:39,43:82:99:1129,0,942 chr2 60735168 . T C 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=0.024;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:173,0,256 chr2 60735288 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 60735454 . T C 1210.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.231;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=5.502;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.52;ReadPosRankSum=-0.571;SOR=1.565 GT:AD:DP:GQ:PL 0/1:37,41:78:99:1239,0,936 chr2 60735698 . G A 628.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.867;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=6.785;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.84;ReadPosRankSum=0.099;SOR=1.781 GT:AD:DP:GQ:PL 0/1:35,23:58:99:657,0,1049 chr2 60735814 . A C 58.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.345;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=2.774;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.52;ReadPosRankSum=0.103;SOR=1.609 GT:AD:DP:GQ:PL 0/1:10,3:13:87:87,0,277 chr2 60770635 . T A 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.000;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr2 60780647 . A G 5334.77 PASS AC=2;AF=1.00;AN=2;DP=163;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.73;SOR=2.040 GT:AD:DP:GQ:PL 1/1:0,163:163:99:5363,489,0 chr2 60780901 . C T 2619.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.32;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2648,205,0 chr2 60782774 . C T 654.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.953;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=2.021;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.92;ReadPosRankSum=-0.780;SOR=0.976 GT:AD:DP:GQ:PL 0/1:36,30:66:99:683,0,785 chr2 60787817 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 60791653 . C T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 60793418 . A G 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr2 60794214 . A G 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.186;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.86;ReadPosRankSum=-1.190;SOR=0.752 GT:AD:DP:GQ:PL 0/1:18,5:23:99:140,0,624 chr2 60796913 . G A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 60800756 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 60835428 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 60881861 . A T 313.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.550;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.96;ReadPosRankSum=-0.680;SOR=0.804 GT:AD:DP:GQ:PL 0/1:18,17:35:99:342,0,411 chr2 60894357 . G A 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 60948177 . T C 3847.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.885;ClippingRankSum=0.000;DP=316;ExcessHet=3.0103;FS=1.344;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.18;ReadPosRankSum=0.150;SOR=0.792 GT:AD:DP:GQ:PL 0/1:164,152:316:99:3876,0,4146 chr2 60962606 . A T 335.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.819;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=6.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.99;ReadPosRankSum=1.743;SOR=2.833 GT:AD:DP:GQ:PL 0/1:10,11:21:99:364,0,273 chr2 60964840 . A G 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=0.303;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,187 chr2 61008720 . C A 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.221;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=0.000;SOR=1.911 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,145 chr2 61076867 . A G 737.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.760;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=3.636;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.57;ReadPosRankSum=0.621;SOR=1.688 GT:AD:DP:GQ:PL 0/1:19,23:42:99:766,0,531 chr2 61077136 . A G 1209.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.719;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=1.921;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.15;ReadPosRankSum=-1.705;SOR=0.977 GT:AD:DP:GQ:PL 0/1:47,45:92:99:1238,0,1246 chr2 61081382 . A G 564.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.151;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=1.115;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.53;ReadPosRankSum=-0.738;SOR=0.465 GT:AD:DP:GQ:PL 0/1:23,26:49:99:593,0,644 chr2 61103996 . T G 2296.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.051;ClippingRankSum=0.000;DP=169;ExcessHet=3.0103;FS=0.655;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=-0.376;SOR=0.619 GT:AD:DP:GQ:PL 0/1:87,82:169:99:2325,0,2498 chr2 61106498 . G T 630.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.785;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=1.958;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.52;ReadPosRankSum=-0.481;SOR=1.453 GT:AD:DP:GQ:PL 0/1:16,20:36:99:659,0,474 chr2 61109388 . T C 702.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.433;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.06;ReadPosRankSum=0.616;SOR=0.804 GT:AD:DP:GQ:PL 0/1:24,26:50:99:731,0,633 chr2 61134317 . T G 806.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.142;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=1.742;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.51;ReadPosRankSum=0.506;SOR=0.307 GT:AD:DP:GQ:PL 0/1:25,27:52:99:835,0,813 chr2 61164170 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 61167716 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 61177770 . C G 355.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.60;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:384,30,0 chr2 61177873 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 61185424 . C T 563.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.11;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:592,45,0 chr2 61186588 . A G 4406.77 PASS AC=2;AF=1.00;AN=2;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.16;SOR=1.068 GT:AD:DP:GQ:PL 1/1:0,129:129:99:4435,387,0 chr2 61190482 . A G 1340.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.92;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1369,126,0 chr2 61223319 . A G 776.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.86;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,22:22:66:805,66,0 chr2 61248705 . A T 635.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.976;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=9.299;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.79;ReadPosRankSum=0.628;SOR=3.164 GT:AD:DP:GQ:PL 0/1:24,19:43:99:664,0,713 chr2 61252282 . C T 134.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.98;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:163,15,0 chr2 61284684 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 61294988 . T C 1437.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.95;SOR=1.414 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1466,135,0 chr2 61319426 . A C 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=0.000;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,218 chr2 61325349 . T A 919.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.85;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,28:28:84:948,84,0 chr2 61331480 . T G 291.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.62;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:320,24,0 chr2 61348173 . A G 4345.77 PASS AC=2;AF=1.00;AN=2;DP=126;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,126:126:99:4374,379,0 chr2 61349382 . G A 2541.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.44;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2570,228,0 chr2 61350300 . T C 1755.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.35;SOR=1.651 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1784,168,0 chr2 61350814 . C T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.95;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 61378244 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 61378479 . T A 477.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.10;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:51:506,51,0 chr2 61380375 . G A 3109.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.06;SOR=1.683 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3138,291,0 chr2 61387209 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 61387210 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 61398371 . A G 99.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:127,12,0 chr2 61417194 . C G 1259.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.30;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1288,117,0 chr2 61422656 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 61424802 . C A 96.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:124,9,0 chr2 61424803 . A G 96.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:124,9,0 chr2 61427121 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.16;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 61482214 . C A 509.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.41;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:538,39,0 chr2 61490016 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr2 61502123 . A G 1879.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.12;SOR=1.259 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1908,129,0 chr2 61502133 . T C 1988.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.35;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,46:46:99:2017,138,0 chr2 61502506 . T A 101.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:129,9,0 chr2 61502507 . C A 101.28 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.63;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:9:129,9,0 chr2 61522555 . C T 522.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.27;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:551,42,0 chr2 61522581 . C T 928.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.40;SOR=2.753 GT:AD:DP:GQ:PL 1/1:0,27:27:81:957,81,0 chr2 61526651 . C T 455.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.57;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:484,36,0 chr2 61534034 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.07;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 61553065 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 61553095 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 61630042 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 61631398 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 61735767 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 61735826 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 61735843 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 61736003 . C T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 61820223 . C G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 61820298 . C G 201.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.471;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=2.881;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.81;ReadPosRankSum=1.159;SOR=0.197 GT:AD:DP:GQ:PL 0/1:4,8:12:99:230,0,130 chr2 61838390 . A G 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.87;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 61838624 . C T 1319.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.466;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.45;ReadPosRankSum=-0.246;SOR=0.667 GT:AD:DP:GQ:PL 0/1:49,57:106:99:1348,0,1245 chr2 61838716 . C T 465.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.293;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=1.379;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.83;ReadPosRankSum=-0.296;SOR=0.446 GT:AD:DP:GQ:PL 0/1:24,19:43:99:494,0,674 chr2 61839792 . A G 4428.77 PASS AC=2;AF=1.00;AN=2;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.55;SOR=0.889 GT:AD:DP:GQ:PL 1/1:0,132:132:99:4457,396,0 chr2 61840298 . T C 821.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.880;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=2.205;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=1.600;SOR=1.136 GT:AD:DP:GQ:PL 0/1:33,28:61:99:850,0,898 chr2 61846783 . C T 891.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.948;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=2.425;SOR=0.623 GT:AD:DP:GQ:PL 0/1:50,32:82:99:920,0,1387 chr2 61847019 . G A 54.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=5.229;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.48;ReadPosRankSum=0.872;SOR=0.035 GT:AD:DP:GQ:PL 0/1:7,3:10:83:83,0,258 chr2 61851360 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 61853877 . A C 2520.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.91;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2549,237,0 chr2 61854082 . A G 2155.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.42;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2184,174,0 chr2 61856656 . G A 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=-0.566;SOR=1.022 GT:AD:DP:GQ:PL 0/1:3,4:7:70:112,0,70 chr2 61860825 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 61868859 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 61871858 . C T 574.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.865;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=6.287;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.37;ReadPosRankSum=-0.678;SOR=2.276 GT:AD:DP:GQ:PL 0/1:20,20:40:99:603,0,511 chr2 61872021 . T C 1312.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.180;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=1.905;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.41;ReadPosRankSum=0.150;SOR=1.022 GT:AD:DP:GQ:PL 0/1:32,48:80:99:1341,0,805 chr2 61877208 . C T 382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.618;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.92;ReadPosRankSum=0.413;SOR=1.765 GT:AD:DP:GQ:PL 0/1:5,11:16:99:411,0,149 chr2 61885087 . G A 1439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.279;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=2.197;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.15;ReadPosRankSum=1.066;SOR=0.446 GT:AD:DP:GQ:PL 0/1:27,38:65:99:1468,0,940 chr2 61889517 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 61889586 . A G 62.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:90,9,0 chr2 61969143 . T G 43.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:71,6,0 chr2 62001045 . C G 1155.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.499;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=4.646;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.45;ReadPosRankSum=1.001;SOR=0.258 GT:AD:DP:GQ:PL 0/1:41,39:80:99:1184,0,1357 chr2 62069527 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 62121931 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 62174358 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 62211787 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 62221720 . G A 1098.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.30;SOR=2.235 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1127,99,0 chr2 62223496 . A G 535.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.49;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,16:16:48:564,48,0 chr2 62227013 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 62229581 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 62230393 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 62230430 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 62272615 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 62294970 . G A 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.46;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr2 62296743 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 62311977 . T G 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.126;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 62386365 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.14;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 62386366 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.56;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 62387660 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 62387680 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 62432894 . T A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr2 62455007 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 62463991 . C A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 62471551 . T C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr2 62471561 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr2 62479270 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 62501605 . A G 185.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.48;ReadPosRankSum=0.723;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:214,0,214 chr2 62502539 . T C 1340.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.947;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=2.217;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.72;ReadPosRankSum=-1.282;SOR=0.626 GT:AD:DP:GQ:PL 0/1:21,47:68:99:1369,0,539 chr2 62502913 . T A 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-1.242;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,131 chr2 62505668 . C G 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 62505750 . C T 400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.083;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.70;ReadPosRankSum=0.690;SOR=0.193 GT:AD:DP:GQ:PL 0/1:12,12:24:99:429,0,417 chr2 62511748 . C T 2083.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.08;SOR=1.926 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2112,189,0 chr2 62511796 . G C 2996.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.88;SOR=1.203 GT:AD:DP:GQ:PL 1/1:0,94:94:99:3025,282,0 chr2 62512000 . A C 611.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.77;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:640,51,0 chr2 62514015 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 62564947 . G A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,81 chr2 62813532 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 62858713 . T C 233.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.38;ReadPosRankSum=0.352;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,7:10:95:262,0,95 chr2 62943786 . C G 351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.314;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.56;ReadPosRankSum=-1.921;SOR=0.871 GT:AD:DP:GQ:PL 0/1:12,16:28:99:380,0,315 chr2 63045589 . T C 776.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.049;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.18;ReadPosRankSum=-0.322;SOR=0.914 GT:AD:DP:GQ:PL 0/1:22,26:48:99:805,0,604 chr2 63051459 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 63055432 . G A 499.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.811;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=6.463;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.12;ReadPosRankSum=-0.452;SOR=0.073 GT:AD:DP:GQ:PL 0/1:16,15:31:99:528,0,575 chr2 63056043 . C G 2958.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.008;ClippingRankSum=0.000;DP=205;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.43;ReadPosRankSum=-0.610;SOR=0.668 GT:AD:DP:GQ:PL 0/1:97,108:205:99:2987,0,2528 chr2 63153674 . G A 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr2 63259294 . C T 2979.77 PASS AC=2;AF=1.00;AN=2;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.25;SOR=1.664 GT:AD:DP:GQ:PL 1/1:0,87:87:99:3008,261,0 chr2 63264303 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 63285158 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 63285232 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 63291915 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 63313388 . A T 1052.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.79;SOR=5.211 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1081,81,0 chr2 63322663 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.22;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 63322888 . T G 741.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=2.636 GT:AD:DP:GQ:PL 1/1:0,21:21:63:770,63,0 chr2 63323057 . A G 279.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:27:308,27,0 chr2 63366684 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 63366694 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 63378295 . A G 430.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.49;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 63378637 . A G 1024.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.55;SOR=4.332 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1053,81,0 chr2 63381882 . A T 1473.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.65;SOR=1.845 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1502,123,0 chr2 63382248 . G C 375.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.80;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:404,30,0 chr2 63404695 . T C 1201.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.690;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=8.022;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.78;ReadPosRankSum=0.647;SOR=0.223 GT:AD:DP:GQ:PL 0/1:48,46:94:99:1230,0,1517 chr2 63404754 . A C 618.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.653;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=3.873;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.73;ReadPosRankSum=1.435;SOR=1.877 GT:AD:DP:GQ:PL 0/1:21,21:42:99:647,0,569 chr2 63404786 . C T 458.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.197;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=2.917;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.12;ReadPosRankSum=0.000;SOR=0.197 GT:AD:DP:GQ:PL 0/1:9,15:24:99:487,0,260 chr2 63407272 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 63434146 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 63437695 . A G 135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.748;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.34;ReadPosRankSum=-0.473;SOR=1.609 GT:AD:DP:GQ:PL 0/1:6,5:11:99:164,0,218 chr2 63439456 . T C 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-0.180;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr2 63487446 . C T 672.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.276;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.02;ReadPosRankSum=0.513;SOR=0.773 GT:AD:DP:GQ:PL 0/1:11,21:32:99:701,0,329 chr2 63493076 . A G 598.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.83;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:627,45,0 chr2 63571199 . C T 577.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.51;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,21:21:63:606,63,0 chr2 63589538 . C G 980.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.08;SOR=5.058 GT:AD:DP:GQ:PL 1/1:0,25:25:75:1009,75,0 chr2 63589642 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 63593264 . C T 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr2 63595538 . A G 1157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.495;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.16;ReadPosRankSum=0.436;SOR=0.616 GT:AD:DP:GQ:PL 0/1:50,38:88:99:1186,0,1606 chr2 63595651 . T C 1673.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.48;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1702,150,0 chr2 63599030 . C G 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.48;ReadPosRankSum=-1.746;SOR=1.445 GT:AD:DP:GQ:PL 0/1:4,8:12:99:298,0,99 chr2 63599394 . T G 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.78;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 63606679 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 63622357 . T C 1845.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.403;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.38;ReadPosRankSum=-0.647;SOR=0.670 GT:AD:DP:GQ:PL 0/1:71,67:138:99:1874,0,2069 chr2 63643825 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 63647358 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 63649908 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 63804498 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 63833524 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 63842598 . G A 368.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.620;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=6.726;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.24;ReadPosRankSum=1.015;SOR=2.338 GT:AD:DP:GQ:PL 0/1:23,13:36:99:397,0,614 chr2 63857980 . G A 1705.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.547;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=1.423;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.33;ReadPosRankSum=1.007;SOR=0.549 GT:AD:DP:GQ:PL 0/1:61,67:128:99:1734,0,1585 chr2 63858210 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:72,0,71 chr2 63862614 . C A 274.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.625;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.18;ReadPosRankSum=-0.960;SOR=0.495 GT:AD:DP:GQ:PL 0/1:17,10:27:99:303,0,529 chr2 63912700 . A T 445.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.409;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.91;ReadPosRankSum=0.000;SOR=0.665 GT:AD:DP:GQ:PL 0/1:24,21:45:99:474,0,626 chr2 63912767 . A T 174.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.714;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=2.935;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.20;ReadPosRankSum=-0.383;SOR=1.751 GT:AD:DP:GQ:PL 0/1:12,7:19:99:203,0,376 chr2 63913167 . A T 301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.627;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=6.628;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.12;ReadPosRankSum=-0.638;SOR=0.042 GT:AD:DP:GQ:PL 0/1:11,12:23:99:330,0,386 chr2 63916750 . T C 305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.84;ReadPosRankSum=0.337;SOR=1.329 GT:AD:DP:GQ:PL 0/1:5,9:14:99:334,0,167 chr2 63949639 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 64012893 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 64036500 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 64061535 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 64100410 . G T 1232.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.808;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=0.758;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.09;ReadPosRankSum=-1.503;SOR=0.564 GT:AD:DP:GQ:PL 0/1:47,55:102:99:1261,0,1159 chr2 64100458 . T C 1361.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.317;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.61;ReadPosRankSum=0.720;SOR=0.683 GT:AD:DP:GQ:PL 0/1:52,56:108:99:1390,0,1239 chr2 64208009 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 64218429 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 64294232 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 64294329 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 64323361 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 64323427 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 64332375 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 64340416 . T G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 64347548 . G A 1349.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.61;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1378,117,0 chr2 64407997 . T A 32.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.92;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:61,0,33 chr2 64455230 . A C 341.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.826;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.197;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.27;ReadPosRankSum=-1.203;SOR=0.269 GT:AD:DP:GQ:PL 0/1:9,12:21:99:370,0,309 chr2 64458296 . T C 810.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.720;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.02;ReadPosRankSum=-0.372;SOR=0.892 GT:AD:DP:GQ:PL 0/1:18,27:45:99:839,0,548 chr2 64458733 . A G 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.95;ReadPosRankSum=0.253;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:64:98,0,64 chr2 64600031 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 64609549 . C G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 64653883 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.23;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 64653884 . G C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.11;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 64665724 . G T 511.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.10;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,17:17:51:540,51,0 chr2 64728080 . T G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.53;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 64728081 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.77;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 64728351 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 64729256 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 64729266 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 64730986 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 64730993 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 64731869 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 64731967 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 64751524 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 64785437 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 64859830 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 64870439 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 64904154 . T G 605.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.583;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.30;ReadPosRankSum=-1.575;SOR=1.697 GT:AD:DP:GQ:PL 0/1:8,18:26:99:634,0,256 chr2 64904389 . A T 4466.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.699;ClippingRankSum=0.000;DP=351;ExcessHet=3.0103;FS=4.043;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=-0.815;SOR=0.526 GT:AD:DP:GQ:PL 0/1:183,168:351:99:4495,0,4602 chr2 64904598 . G A 1609.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.887;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=-2.549;SOR=0.721 GT:AD:DP:GQ:PL 0/1:65,58:123:99:1638,0,1698 chr2 64904916 . G A 1740.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.182;ClippingRankSum=0.000;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.23;ReadPosRankSum=0.873;SOR=0.689 GT:AD:DP:GQ:PL 0/1:80,75:155:99:1769,0,2281 chr2 64905406 . C T 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=0.000;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr2 64932462 . G A 1254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.940;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=1.070;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.73;ReadPosRankSum=1.250;SOR=0.993 GT:AD:DP:GQ:PL 0/1:24,43:67:99:1283,0,529 chr2 64935924 . T A 45.88 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.29;ReadPosRankSum=-0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:16:74,0,16 chr2 64973484 . C A 371.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=2.432;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.20;ReadPosRankSum=0.529;SOR=0.397 GT:AD:DP:GQ:PL 0/1:42,18:60:99:400,0,1200 chr2 64990257 . T G 1225.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.291;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.13;ReadPosRankSum=-0.158;SOR=0.591 GT:AD:DP:GQ:PL 0/1:37,44:81:99:1254,0,993 chr2 65018989 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr2 65020671 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 65039318 . T C 88.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:116,12,0 chr2 65068163 . C G 65.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:93,9,0 chr2 65069523 . A G 3179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.915;ClippingRankSum=0.000;DP=215;ExcessHet=3.0103;FS=0.502;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.79;ReadPosRankSum=0.105;SOR=0.755 GT:AD:DP:GQ:PL 0/1:99,116:215:99:3208,0,2749 chr2 65071705 . A G 3866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.202;ClippingRankSum=0.000;DP=293;ExcessHet=3.0103;FS=2.608;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.24;ReadPosRankSum=-0.747;SOR=0.557 GT:AD:DP:GQ:PL 0/1:154,138:292:99:3895,0,3993 chr2 65072632 . T C 4889.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.236;ClippingRankSum=0.000;DP=349;ExcessHet=3.0103;FS=4.757;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.01;ReadPosRankSum=0.631;SOR=0.495 GT:AD:DP:GQ:PL 0/1:169,180:349:99:4918,0,4476 chr2 65077771 . G A 1546.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.217;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=1.584;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.81;ReadPosRankSum=-1.098;SOR=0.902 GT:AD:DP:GQ:PL 0/1:58,54:112:99:1575,0,1699 chr2 65082742 . C T 1418.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.531;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=6.499;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.48;ReadPosRankSum=-1.517;SOR=0.262 GT:AD:DP:GQ:PL 0/1:45,53:98:99:1447,0,1392 chr2 65082854 . T C 135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.849;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.05;ReadPosRankSum=0.665;SOR=0.892 GT:AD:DP:GQ:PL 0/1:10,5:15:99:164,0,360 chr2 65088032 . A C 111.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:140,15,0 chr2 65088067 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 65088086 . A G 221.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.40;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:250,18,0 chr2 65088093 . G C 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.07;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr2 65088106 . C G 176.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.10;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:205,15,0 chr2 65088116 . T G 200.84 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.48;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:18:229,18,0 chr2 65088158 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.96;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 65088159 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.45;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 65088221 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 65088222 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 65088378 . G A 70.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.456;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=57.90;MQRankSum=-2.000;QD=5.90;ReadPosRankSum=1.767;SOR=0.105 GT:AD:DP:GQ:PL 0/1:9,3:12:99:99,0,369 chr2 65088577 . G A 933.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.745;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=1.688;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.26;ReadPosRankSum=1.469;SOR=0.883 GT:AD:DP:GQ:PL 0/1:50,41:91:99:962,0,1292 chr2 65088746 . G C 431.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.188;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=2.366;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.61;ReadPosRankSum=2.035;SOR=1.536 GT:AD:DP:GQ:PL 0/1:12,14:26:99:460,0,389 chr2 65088769 . G A 294.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.355;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=2.858;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.42;ReadPosRankSum=0.218;SOR=2.303 GT:AD:DP:GQ:PL 0/1:6,10:16:99:323,0,202 chr2 65113864 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 65113951 . T C 350.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.588;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.96;ReadPosRankSum=1.214;SOR=0.368 GT:AD:DP:GQ:PL 0/1:19,13:32:99:379,0,629 chr2 65129991 . A G 4716.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.917;ClippingRankSum=0.000;DP=322;ExcessHet=3.0103;FS=10.408;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.69;ReadPosRankSum=0.483;SOR=0.371 GT:AD:DP:GQ:PL 0/1:146,175:321:99:4745,0,3526 chr2 65144935 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 65251237 . T A 654.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.159;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.83;ReadPosRankSum=-1.788;SOR=1.329 GT:AD:DP:GQ:PL 0/1:11,19:30:99:683,0,345 chr2 65253874 . A C 441.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.335;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=3.620;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.80;ReadPosRankSum=-1.273;SOR=1.100 GT:AD:DP:GQ:PL 0/1:45,20:65:99:470,0,1263 chr2 65261026 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 65261404 . G A 478.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.563;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.70;ReadPosRankSum=-1.384;SOR=0.622 GT:AD:DP:GQ:PL 0/1:34,21:55:99:507,0,1050 chr2 65265352 . C T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 65268436 . A C 355.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.453;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.94;ReadPosRankSum=-0.423;SOR=1.609 GT:AD:DP:GQ:PL 0/1:11,10:21:99:384,0,684 chr2 65268437 . T C 355.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.389;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.17;ReadPosRankSum=0.000;SOR=1.473 GT:AD:DP:GQ:PL 0/1:12,10:22:99:384,0,684 chr2 65268753 . G A 1662.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.151;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=0.718;MLEAC=1;MLEAF=0.500;MQ=59.65;MQRankSum=-2.162;QD=14.85;ReadPosRankSum=-0.244;SOR=0.563 GT:AD:DP:GQ:PL 0/1:48,64:112:99:1691,0,1192 chr2 65268884 . C G 811.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.883;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=10.119;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.00;ReadPosRankSum=-0.545;SOR=2.066 GT:AD:DP:GQ:PL 0/1:28,30:58:99:840,0,589 chr2 65313771 . C G 4353.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.100;ClippingRankSum=0.000;DP=324;ExcessHet=3.0103;FS=6.585;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.48;ReadPosRankSum=0.708;SOR=1.010 GT:AD:DP:GQ:PL 0/1:159,164:323:99:4382,0,4235 chr2 65314461 . G C 208.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.185;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.60;ReadPosRankSum=0.391;SOR=0.495 GT:AD:DP:GQ:PL 0/1:10,8:18:99:237,0,316 chr2 65316455 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 65329515 . T G 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr2 65329519 . C T 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr2 65331893 . A G 845.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.910;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=0.868;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.19;ReadPosRankSum=-0.985;SOR=0.807 GT:AD:DP:GQ:PL 0/1:52,31:83:99:874,0,1548 chr2 65344800 . G A 1301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.745;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=0.739;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.28;ReadPosRankSum=-0.786;SOR=0.789 GT:AD:DP:GQ:PL 0/1:59,47:106:99:1330,0,1533 chr2 65377780 . A G 1016.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.748;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=1.250;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.14;ReadPosRankSum=-0.622;SOR=0.947 GT:AD:DP:GQ:PL 0/1:31,32:63:99:1045,0,901 chr2 65500835 . A G 764.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.84;SOR=2.419 GT:AD:DP:GQ:PL 1/1:0,19:19:57:793,57,0 chr2 65501132 . A G 1384.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.97;SOR=1.721 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1413,126,0 chr2 65501648 . T A 134.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.98;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:163,15,0 chr2 65540731 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 65540768 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 65564793 . A T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 65566980 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 65572262 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 65667235 . T C 3080.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.23;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,90:90:99:3109,270,0 chr2 65667429 . G C 248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.070;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.37;ReadPosRankSum=0.756;SOR=0.392 GT:AD:DP:GQ:PL 0/1:14,10:24:99:277,0,467 chr2 65667677 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 65729323 . C T 100.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.18;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:129,15,0 chr2 65764395 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 65764412 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 66438014 . T C 3149.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.611;ClippingRankSum=0.000;DP=240;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.12;ReadPosRankSum=0.331;SOR=0.676 GT:AD:DP:GQ:PL 0/1:125,115:240:99:3178,0,3393 chr2 66440054 . C T 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.998;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.16;ReadPosRankSum=-1.637;SOR=2.179 GT:AD:DP:GQ:PL 0/1:5,6:11:99:140,0,158 chr2 66441177 . A G 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=-0.751;SOR=0.078 GT:AD:DP:GQ:PL 0/1:6,4:10:99:137,0,221 chr2 66571150 . G T 1528.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.05;SOR=3.109 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1557,129,0 chr2 66575032 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 66625338 . C T 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.97;ReadPosRankSum=0.366;SOR=2.258 GT:AD:DP:GQ:PL 0/1:5,2:7:63:63,0,120 chr2 66847112 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 67397170 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 67403848 . G A 2648.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.11;SOR=1.552 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2677,240,0 chr2 67404699 . G A 1982.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.10;SOR=1.567 GT:AD:DP:GQ:PL 1/1:0,54:54:99:2011,162,0 chr2 67404993 . C T 1550.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.81;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1579,129,0 chr2 67410064 . G A 1942.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.38;SOR=1.355 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1971,180,0 chr2 67542982 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 67713735 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 67714674 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 67714678 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 67877678 . A T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 68024177 . T G 228.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.203;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=1.957;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.46;ReadPosRankSum=-0.999;SOR=0.634 GT:AD:DP:GQ:PL 0/1:8,9:17:99:257,0,215 chr2 68024215 . A G 220.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.736;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=1.957;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=-1.265;SOR=0.283 GT:AD:DP:GQ:PL 0/1:9,8:17:99:249,0,257 chr2 68024630 . T C 251.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.024;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.81;ReadPosRankSum=-0.327;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,12:17:99:280,0,158 chr2 68116888 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 68125383 . A C 6100.77 PASS AC=2;AF=1.00;AN=2;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.92;SOR=1.799 GT:AD:DP:GQ:PL 1/1:0,170:170:99:6129,510,0 chr2 68131209 . T C 1906.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.78;SOR=1.942 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1935,180,0 chr2 68131521 . T C 1133.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.86;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1162,96,0 chr2 68133368 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 68157965 . A G 8372.77 PASS AC=2;AF=1.00;AN=2;DP=243;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.46;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,243:243:99:8401,730,0 chr2 68161691 . A G 2970.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.13;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,102:102:99:2999,304,0 chr2 68173824 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 68174425 . A G 247.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.36;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:276,21,0 chr2 68174880 . G T 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.13;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr2 68177696 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 68179106 . A T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 68179142 . C A 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 68179167 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.35;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 68179177 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.63;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 68179198 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 68179210 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 68179215 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 68179236 . A G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.49;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 68179237 . T C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.83;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 68179247 . C T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.65;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 68179261 . A G 149.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.66;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:177,12,0 chr2 68179275 . T G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.03;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 68179289 . A G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.35;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 68179290 . G T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.36;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 68179292 . C T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.81;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 68179296 . A G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.46;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 68179297 . C T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 68179325 . T C 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.97;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr2 68179333 . A T 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.28;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr2 68179344 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 68179404 . A G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.58;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 68179405 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.77;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 68179424 . T G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.47;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 68179471 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 68179478 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 68179491 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 68179492 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 68179493 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 68179502 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 68179504 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 68180697 . A G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.674;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 68180724 . C T 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.35;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:75:120,0,75 chr2 68180726 . T C 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.35;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:75:120,0,75 chr2 68180745 . T C 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.75;ReadPosRankSum=-1.036;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:99:117,0,114 chr2 68180758 . G A 85.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.25;ReadPosRankSum=0.652;SOR=0.086 GT:AD:DP:GQ:PL 0/1:4,3:7:99:114,0,152 chr2 68180791 . A G 64.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.897;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=6.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.63;ReadPosRankSum=0.779;SOR=0.016 GT:AD:DP:GQ:PL 0/1:11,3:14:93:93,0,453 chr2 68180793 . T A 64.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.696;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=6.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.63;ReadPosRankSum=0.623;SOR=0.016 GT:AD:DP:GQ:PL 0/1:11,3:14:93:93,0,453 chr2 68180794 . A G 565.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.20;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:594,42,0 chr2 68180795 . C G 64.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.894;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=6.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.63;ReadPosRankSum=0.546;SOR=0.016 GT:AD:DP:GQ:PL 0/1:11,3:14:93:93,0,453 chr2 68188635 . G A 2357.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.21;SOR=1.042 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2386,213,0 chr2 68252444 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 68252539 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 68256264 . A T 418.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.17;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:447,33,0 chr2 68284452 . A G 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.397;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=2.925;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.43;ReadPosRankSum=-1.916;SOR=1.294 GT:AD:DP:GQ:PL 0/1:27,14:41:99:292,0,703 chr2 68318808 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 68318853 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 68319172 . T C 488.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.91;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,14:14:42:517,42,0 chr2 68319242 . T C 803.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.49;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,24:24:72:832,72,0 chr2 68319317 . G A 411.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.361;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.73;ReadPosRankSum=1.505;SOR=0.941 GT:AD:DP:GQ:PL 0/1:14,16:30:99:440,0,392 chr2 68328942 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 68328968 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 68365183 . A C 1221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.559;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=1.862;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.98;ReadPosRankSum=-0.998;SOR=0.458 GT:AD:DP:GQ:PL 0/1:58,44:102:99:1250,0,1808 chr2 68365364 . C T 5015.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.690;ClippingRankSum=0.000;DP=441;ExcessHet=3.0103;FS=2.462;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=0.647;SOR=0.905 GT:AD:DP:GQ:PL 0/1:239,201:440:99:5044,0,6414 chr2 68365414 . C A 4971.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.958;ClippingRankSum=0.000;DP=440;ExcessHet=3.0103;FS=4.978;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.30;ReadPosRankSum=-0.636;SOR=0.686 GT:AD:DP:GQ:PL 0/1:240,200:440:99:5000,0,6472 chr2 68365452 . T C 12907.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.293;ClippingRankSum=0.000;DP=401;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.19;ReadPosRankSum=-0.913;SOR=1.199 GT:AD:DP:GQ:PL 1/1:2,399:401:99:12936,1154,0 chr2 68380559 . G A 383.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.382;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=3.307;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.34;ReadPosRankSum=-0.548;SOR=0.233 GT:AD:DP:GQ:PL 0/1:32,14:46:99:412,0,1095 chr2 68386578 . G A 2899.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.188;ClippingRankSum=0.000;DP=229;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.66;ReadPosRankSum=0.190;SOR=0.670 GT:AD:DP:GQ:PL 0/1:123,106:229:99:2928,0,3478 chr2 68386914 . A T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 68388131 . A T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 68388263 . C T 628.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.189;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.05;ReadPosRankSum=-0.020;SOR=1.044 GT:AD:DP:GQ:PL 0/1:14,19:33:99:657,0,485 chr2 68388522 . T C 2342.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.073;ClippingRankSum=0.000;DP=165;ExcessHet=3.0103;FS=5.956;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.20;ReadPosRankSum=-0.930;SOR=1.176 GT:AD:DP:GQ:PL 0/1:80,85:165:99:2371,0,1968 chr2 68393278 . T A 880.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.470;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=2.521;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=0.340;SOR=0.332 GT:AD:DP:GQ:PL 0/1:34,34:68:99:909,0,1075 chr2 68394206 . G T 555.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.202;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=3.665;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.26;ReadPosRankSum=0.186;SOR=1.270 GT:AD:DP:GQ:PL 0/1:36,24:60:99:584,0,982 chr2 68394295 . G A 426.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.472;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.728;SOR=0.527 GT:AD:DP:GQ:PL 0/1:21,18:39:99:455,0,646 chr2 68395526 . C T 234.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.502;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.06;ReadPosRankSum=-1.294;SOR=1.179 GT:AD:DP:GQ:PL 0/1:5,8:13:99:263,0,170 chr2 68395782 . G A 4640.77 PASS AC=2;AF=1.00;AN=2;DP=149;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.36;SOR=1.298 GT:AD:DP:GQ:PL 1/1:0,148:148:99:4669,444,0 chr2 68395820 . G C 1733.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.799;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=2.785;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.21;ReadPosRankSum=-1.055;SOR=1.002 GT:AD:DP:GQ:PL 0/1:53,61:114:99:1762,0,1413 chr2 68448772 . G T 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=0.589;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr2 68448876 . A T 473.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.050;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=1.279;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.47;ReadPosRankSum=-1.765;SOR=0.473 GT:AD:DP:GQ:PL 0/1:18,20:38:99:502,0,502 chr2 68467927 . G A 226.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.113;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=5.497;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.12;ReadPosRankSum=-1.111;SOR=2.419 GT:AD:DP:GQ:PL 0/1:7,8:15:99:255,0,179 chr2 68502799 . A G 779.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.692;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.903;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.30;ReadPosRankSum=1.100;SOR=0.580 GT:AD:DP:GQ:PL 0/1:39,30:69:99:808,0,1042 chr2 68502860 . A G 725.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.227;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.928;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.34;ReadPosRankSum=-0.624;SOR=0.826 GT:AD:DP:GQ:PL 0/1:34,30:64:99:754,0,892 chr2 68513003 . T A 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.84;ReadPosRankSum=-0.584;SOR=0.976 GT:AD:DP:GQ:PL 0/1:6,8:14:99:292,0,208 chr2 68513387 . C T 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.11;ReadPosRankSum=1.005;SOR=0.180 GT:AD:DP:GQ:PL 0/1:8,8:16:99:286,0,286 chr2 68513466 . G A 577.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.190;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=4.973;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.26;ReadPosRankSum=0.037;SOR=3.086 GT:AD:DP:GQ:PL 0/1:7,15:22:99:606,0,238 chr2 68513470 . G C 612.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.226;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.53;ReadPosRankSum=1.016;SOR=2.948 GT:AD:DP:GQ:PL 0/1:8,16:24:99:641,0,274 chr2 68513602 . A C 1047.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.868;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=3.849;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.39;ReadPosRankSum=0.374;SOR=1.009 GT:AD:DP:GQ:PL 0/1:47,45:92:99:1076,0,1211 chr2 68526108 . T A 354.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.787;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=2.908;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.59;ReadPosRankSum=0.375;SOR=0.345 GT:AD:DP:GQ:PL 0/1:20,17:37:99:383,0,520 chr2 68567351 . C A 207.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.073;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.07;ReadPosRankSum=-2.050;SOR=0.836 GT:AD:DP:GQ:PL 0/1:28,13:41:99:236,0,693 chr2 68567396 . G T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.735;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=8.098;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.56;ReadPosRankSum=-1.171;SOR=2.670 GT:AD:DP:GQ:PL 0/1:27,5:32:99:110,0,669 chr2 68612631 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 68645939 . A G 3508.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.871;ClippingRankSum=0.000;DP=265;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.24;ReadPosRankSum=-0.482;SOR=0.669 GT:AD:DP:GQ:PL 0/1:123,142:265:99:3537,0,3298 chr2 68655336 . T C 6091.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=424;ExcessHet=3.0103;FS=1.747;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.37;ReadPosRankSum=-1.215;SOR=0.882 GT:AD:DP:GQ:PL 0/1:203,221:424:99:6120,0,5423 chr2 68660605 . T G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:69:81,0,69 chr2 68660607 . G T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:69:81,0,69 chr2 68775628 . C T 2153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.798;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=1.843;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=-0.121;SOR=0.854 GT:AD:DP:GQ:PL 0/1:94,86:180:99:2182,0,2648 chr2 68775982 . C A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 68782172 . C T 644.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.738;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=3.647;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.53;ReadPosRankSum=-1.448;SOR=0.235 GT:AD:DP:GQ:PL 0/1:16,23:39:99:673,0,505 chr2 68790386 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 68805764 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 68807025 . T C 191.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.18;ReadPosRankSum=-0.241;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:220,0,137 chr2 68807715 . C T 221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.198;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.84;ReadPosRankSum=0.674;SOR=1.828 GT:AD:DP:GQ:PL 0/1:7,7:14:99:250,0,215 chr2 68815989 . G A 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=1.981;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr2 68816134 . T A 694.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.579;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=2.675;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.79;ReadPosRankSum=0.119;SOR=0.368 GT:AD:DP:GQ:PL 0/1:25,19:44:99:723,0,1225 chr2 68816407 . G C 1004.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.07;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1033,84,0 chr2 68816549 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 68818026 . C A 647.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.217;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.61;ReadPosRankSum=0.362;SOR=0.824 GT:AD:DP:GQ:PL 0/1:15,24:39:99:676,0,373 chr2 68819032 . C A 203.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.017;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=2.383;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.25;ReadPosRankSum=0.145;SOR=1.656 GT:AD:DP:GQ:PL 0/1:39,9:48:99:232,0,1247 chr2 68819587 . G A 1042.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.771;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=1.684;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=-2.094;SOR=0.512 GT:AD:DP:GQ:PL 0/1:51,45:96:99:1071,0,1321 chr2 68819738 . G T 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=-0.616;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:137,0,219 chr2 68822809 . T C 1861.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.485;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=13.445;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.08;ReadPosRankSum=-0.374;SOR=0.176 GT:AD:DP:GQ:PL 0/1:48,61:109:99:1890,0,1507 chr2 68906667 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 68927016 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 68950137 . C A 1276.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.342;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=1.646;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.90;ReadPosRankSum=-0.369;SOR=0.508 GT:AD:DP:GQ:PL 0/1:49,50:99:99:1305,0,1239 chr2 68953029 . T A 1754.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.41;SOR=3.486 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1783,152,0 chr2 68953107 . C T 468.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.35;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:497,36,0 chr2 68974369 . G A 1274.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.90;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1303,96,0 chr2 68974762 . C T 1959.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.79;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1988,174,0 chr2 68974850 . T C 300.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:329,24,0 chr2 68977539 . A T 835.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.014;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.57;ReadPosRankSum=-1.056;SOR=0.701 GT:AD:DP:GQ:PL 0/1:17,28:45:99:864,0,473 chr2 68979011 . G A 392.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.589;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=1.519;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.62;ReadPosRankSum=0.412;SOR=0.420 GT:AD:DP:GQ:PL 0/1:21,16:37:99:421,0,766 chr2 68980126 . G A 318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.140;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=4.481;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.94;ReadPosRankSum=1.615;SOR=1.535 GT:AD:DP:GQ:PL 0/1:7,13:20:99:347,0,164 chr2 68980225 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.29;ReadPosRankSum=-0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,2:6:72:72,0,397 chr2 68980634 . A G 885.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.217;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=3.546;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.37;ReadPosRankSum=1.619;SOR=1.651 GT:AD:DP:GQ:PL 0/1:23,28:51:99:914,0,772 chr2 68980855 . A G 1521.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.895;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.98;ReadPosRankSum=2.795;SOR=0.650 GT:AD:DP:GQ:PL 0/1:63,64:127:99:1550,0,1708 chr2 69000985 . A C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 69013519 . G A 962.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.451;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=3.278;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.03;ReadPosRankSum=-0.300;SOR=1.185 GT:AD:DP:GQ:PL 0/1:42,38:80:99:991,0,1173 chr2 69044984 . C T 508.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.145;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=1.445;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.13;ReadPosRankSum=1.219;SOR=0.412 GT:AD:DP:GQ:PL 0/1:17,19:36:99:537,0,466 chr2 69070309 . G C 202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.549;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.53;ReadPosRankSum=0.000;SOR=0.859 GT:AD:DP:GQ:PL 0/1:2,7:9:56:231,0,56 chr2 69070490 . C T 2445.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=1.079 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2474,231,0 chr2 69070881 . C T 371.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.57;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:400,27,0 chr2 69070882 . C A 371.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.84;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:27:400,27,0 chr2 69071685 . T C 1001.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.616;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=5.486;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.13;ReadPosRankSum=-0.245;SOR=1.312 GT:AD:DP:GQ:PL 0/1:48,42:90:99:1030,0,1089 chr2 69071981 . T G 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.253;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr2 69073332 . C T 176.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.55;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:205,15,0 chr2 69077335 . A G 1034.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.441;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=1.784;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.05;ReadPosRankSum=1.430;SOR=0.505 GT:AD:DP:GQ:PL 0/1:62,41:103:99:1063,0,1674 chr2 69090793 . G A 3571.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.18;SOR=0.995 GT:AD:DP:GQ:PL 1/1:0,111:111:99:3600,333,0 chr2 69090997 . T G 799.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.28;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,22:22:66:828,66,0 chr2 69102640 . A G 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.82;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr2 69102650 . T C 283.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.27;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:312,21,0 chr2 69103152 . G A 1477.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.55;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1506,114,0 chr2 69123299 . T G 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=-1.068;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,140 chr2 69124489 . T A 259.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.32;ReadPosRankSum=-0.860;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,8:15:99:288,0,247 chr2 69170025 . G A 492.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.08;ReadPosRankSum=-0.773;SOR=0.458 GT:AD:DP:GQ:PL 0/1:20,15:35:99:521,0,730 chr2 69171131 . G A 973.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.661;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=3.792;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.23;ReadPosRankSum=-1.059;SOR=1.260 GT:AD:DP:GQ:PL 0/1:24,36:60:99:1002,0,569 chr2 69181897 . C A 2865.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.802;ClippingRankSum=0.000;DP=205;ExcessHet=3.0103;FS=4.212;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.98;ReadPosRankSum=-0.419;SOR=0.998 GT:AD:DP:GQ:PL 0/1:102,103:205:99:2894,0,2656 chr2 69182090 . C T 236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.31;ReadPosRankSum=-0.812;SOR=2.093 GT:AD:DP:GQ:PL 0/1:2,7:9:56:265,0,56 chr2 69182133 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 69193464 . T C 978.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.792;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.579;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.31;ReadPosRankSum=-0.867;SOR=0.322 GT:AD:DP:GQ:PL 0/1:31,29:60:99:1016,0,919 chr2 69317552 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 69338213 . T C 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.328;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,143 chr2 69338712 . A T 364.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.11;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:393,27,0 chr2 69345897 . T C 1577.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.94;SOR=1.314 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1606,153,0 chr2 69346141 . T C 426.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.98;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:455,33,0 chr2 69356764 . A G 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.86;ReadPosRankSum=0.000;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:180,0,146 chr2 69359161 . A C 1782.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1811,162,0 chr2 69359238 . A G 972.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.849;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.10;ReadPosRankSum=0.408;SOR=0.620 GT:AD:DP:GQ:PL 0/1:30,39:69:99:1001,0,832 chr2 69385411 . C G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 69386794 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 69386826 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.76;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 69387029 . A G 2288.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.66;SOR=1.644 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2317,204,0 chr2 69400787 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 69406250 . A T 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.24;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 69415440 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 69415838 . G T 80.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0 chr2 69419372 . G A 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.11;ReadPosRankSum=-0.967;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,8:16:99:286,0,286 chr2 69431994 . A T 2232.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.959;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=2.415;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.54;ReadPosRankSum=-0.274;SOR=1.000 GT:AD:DP:GQ:PL 0/1:58,77:135:99:2261,0,1528 chr2 69437634 . C T 433.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.68;ReadPosRankSum=0.453;SOR=1.730 GT:AD:DP:GQ:PL 0/1:13,13:26:99:462,0,465 chr2 69461517 . T C 330.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.955;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.03;ReadPosRankSum=-1.814;SOR=1.022 GT:AD:DP:GQ:PL 0/1:10,12:22:99:359,0,275 chr2 69466615 . T C 758.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.148;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=9.675;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.65;ReadPosRankSum=1.076;SOR=3.196 GT:AD:DP:GQ:PL 0/1:21,22:43:99:787,0,679 chr2 69478754 . G A 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.389;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.84;ReadPosRankSum=0.785;SOR=2.303 GT:AD:DP:GQ:PL 0/1:6,8:14:99:292,0,170 chr2 69478860 . T A 1020.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.162;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=2.030;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.18;ReadPosRankSum=-1.130;SOR=0.963 GT:AD:DP:GQ:PL 0/1:33,39:72:99:1049,0,856 chr2 69482787 . A G 1119.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.039;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.09;ReadPosRankSum=0.896;SOR=0.687 GT:AD:DP:GQ:PL 0/1:57,44:101:99:1148,0,1474 chr2 69482926 . G A 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.29;ReadPosRankSum=-0.026;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,7:13:99:253,0,211 chr2 69514669 . C T 481.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.133;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.83;ReadPosRankSum=-0.822;SOR=0.741 GT:AD:DP:GQ:PL 0/1:30,19:49:99:510,0,901 chr2 69514722 . T G 2225.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.22;SOR=1.066 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2254,201,0 chr2 69519164 . C T 1440.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.357;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.53;ReadPosRankSum=-0.171;SOR=0.657 GT:AD:DP:GQ:PL 0/1:57,58:115:99:1469,0,1475 chr2 69520685 . G C 1574.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.23;SOR=2.110 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1603,138,0 chr2 69530159 . A G 850.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.157;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=3.373;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.49;ReadPosRankSum=0.847;SOR=0.283 GT:AD:DP:GQ:PL 0/1:10,36:46:99:879,0,212 chr2 69531857 . C T 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.728;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=0.742;SOR=0.169 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,228 chr2 69532283 . G A 746.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.94;SOR=2.737 GT:AD:DP:GQ:PL 1/1:0,22:22:66:775,66,0 chr2 69544352 . C T 3429.77 PASS AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=1.848 GT:AD:DP:GQ:PL 1/1:0,104:104:99:3458,312,0 chr2 69557146 . T C 634.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.22;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:663,48,0 chr2 69577797 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 69585145 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 69598496 . G T 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-0.566;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,131 chr2 69642769 . A G 980.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.302;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=2.877;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.32;ReadPosRankSum=-2.171;SOR=0.414 GT:AD:DP:GQ:PL 0/1:50,45:95:99:1009,0,1190 chr2 69651824 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 69651826 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 69681489 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 69739157 . C T 79.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:108,15,0 chr2 69781429 . C T 903.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.857;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=3.496;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.72;ReadPosRankSum=0.245;SOR=1.424 GT:AD:DP:GQ:PL 0/1:22,29:51:99:932,0,629 chr2 69786601 . A G 37.31 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.967;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:1:63,0,1 chr2 69787854 . T C 1457.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.313;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.51;ReadPosRankSum=-0.698;SOR=0.752 GT:AD:DP:GQ:PL 0/1:44,50:94:99:1486,0,1171 chr2 69788359 . A G 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.253;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr2 69804665 . C G 3614.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3643,345,0 chr2 69804809 . A G 258.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.96;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:287,21,0 chr2 69806579 . G C 3400.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.96;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,86:86:99:3429,259,0 chr2 69807661 . A G 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 69810607 . C G 1760.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.668;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=1.257;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.87;ReadPosRankSum=-0.873;SOR=0.573 GT:AD:DP:GQ:PL 0/1:89,73:162:99:1789,0,2225 chr2 69812545 . A C 2439.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.83;SOR=2.338 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2468,201,0 chr2 69813012 . C T 32.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.46;ReadPosRankSum=0.253;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:61:61,0,156 chr2 69813015 . T C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.44;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:68:110,0,68 chr2 69816013 . G A 1542.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.600;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=0.703;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.96;ReadPosRankSum=1.324;SOR=0.614 GT:AD:DP:GQ:PL 0/1:57,62:119:99:1571,0,1619 chr2 69816255 . C T 821.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.111;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=4.648;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.42;ReadPosRankSum=-0.743;SOR=0.223 GT:AD:DP:GQ:PL 0/1:26,31:57:99:850,0,780 chr2 69829734 . A G 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=1.981;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,153 chr2 69830316 . T G 1454.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.63;SOR=1.151 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1483,120,0 chr2 69837795 . C A 675.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.972;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.124;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.75;ReadPosRankSum=-0.300;SOR=0.503 GT:AD:DP:GQ:PL 0/1:24,29:53:99:704,0,671 chr2 69843327 . A G 935.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.265;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.18;ReadPosRankSum=0.099;SOR=0.672 GT:AD:DP:GQ:PL 0/1:34,37:71:99:964,0,954 chr2 69849822 . A T 1833.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.96;SOR=2.137 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1862,162,0 chr2 69864860 . A G 660.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.931;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=2.797;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.36;ReadPosRankSum=-1.175;SOR=1.295 GT:AD:DP:GQ:PL 0/1:22,24:46:99:689,0,518 chr2 69871676 . A G 605.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.54;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:634,48,0 chr2 69878680 . G A 152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=-0.494;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:181,0,215 chr2 69878886 . G A 562.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.202;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.280;SOR=0.736 GT:AD:DP:GQ:PL 0/1:28,24:52:99:591,0,741 chr2 69894065 . T C 2969.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.324;ClippingRankSum=0.000;DP=192;ExcessHet=3.0103;FS=3.237;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.47;ReadPosRankSum=-0.167;SOR=0.449 GT:AD:DP:GQ:PL 0/1:95,97:192:99:2998,0,2896 chr2 69897184 . T A 732.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.880;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.83;ReadPosRankSum=1.652;SOR=0.631 GT:AD:DP:GQ:PL 0/1:23,30:53:99:761,0,600 chr2 69915957 . C T 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.04;ReadPosRankSum=1.578;SOR=0.132 GT:AD:DP:GQ:PL 0/1:15,5:20:99:149,0,564 chr2 69933526 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 69935402 . T G 894.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.411;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=7.086;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.53;ReadPosRankSum=0.126;SOR=0.678 GT:AD:DP:GQ:PL 0/1:47,38:85:99:923,0,1321 chr2 69936902 . T C 2989.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.826;ClippingRankSum=0.000;DP=176;ExcessHet=3.0103;FS=3.084;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.99;ReadPosRankSum=0.336;SOR=1.008 GT:AD:DP:GQ:PL 0/1:72,104:176:99:3018,0,1851 chr2 69953116 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 69960406 . C T 440.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.69;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:469,36,0 chr2 69960595 . A C 2700.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.900;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=3.360;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=26.48;ReadPosRankSum=0.522;SOR=2.165 GT:AD:DP:GQ:PL 1/1:2,100:102:99:2729,246,0 chr2 69961544 . T C 5282.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.972;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=33.86;ReadPosRankSum=-0.666;SOR=0.795 GT:AD:DP:GQ:PL 1/1:1,155:156:99:5311,458,0 chr2 69970215 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 70010228 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 70021471 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 70021479 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 70024721 . T C 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr2 70074438 . A G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 70081023 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 70143671 . C A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 70146001 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 70175657 . G C 1050.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.254;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=3.026;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.83;ReadPosRankSum=0.014;SOR=1.056 GT:AD:DP:GQ:PL 0/1:39,37:76:99:1079,0,1045 chr2 70175771 . T G 845.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.323;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=1.020;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.34;ReadPosRankSum=1.592;SOR=0.850 GT:AD:DP:GQ:PL 0/1:28,31:59:99:874,0,717 chr2 70179784 . A T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.566;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,133 chr2 70181806 . A G 3787.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.738;ClippingRankSum=0.000;DP=264;ExcessHet=3.0103;FS=3.570;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-0.719;SOR=0.948 GT:AD:DP:GQ:PL 0/1:132,132:264:99:3816,0,3536 chr2 70210911 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 70210914 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 70228775 . A G 157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.578;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.14;ReadPosRankSum=0.448;SOR=0.892 GT:AD:DP:GQ:PL 0/1:6,7:13:99:186,0,123 chr2 70230608 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 70275798 . A G 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-0.084;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr2 70297264 . C T 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.880;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.68;MQRankSum=-5.867;QD=2.47;ReadPosRankSum=-1.602;SOR=0.140 GT:AD:DP:GQ:PL 0/1:31,5:36:99:117,0,1149 chr2 70297305 . A G 216.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.424;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=5.980;MLEAC=1;MLEAF=0.500;MQ=57.80;MQRankSum=-8.089;QD=3.24;ReadPosRankSum=-0.497;SOR=0.024 GT:AD:DP:GQ:PL 0/1:58,9:67:99:245,0,2405 chr2 70297312 . C G 324.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.845;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=18.188;MLEAC=1;MLEAF=0.500;MQ=57.66;MQRankSum=-8.545;QD=4.33;ReadPosRankSum=-1.253;SOR=0.008 GT:AD:DP:GQ:PL 0/1:62,13:75:99:353,0,2648 chr2 70297319 . C T 334.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.996;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=15.626;MLEAC=1;MLEAF=0.500;MQ=57.84;MQRankSum=-8.894;QD=4.13;ReadPosRankSum=-0.219;SOR=0.015 GT:AD:DP:GQ:PL 0/1:68,13:81:99:363,0,2813 chr2 70297320 . A G 334.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.976;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=21.606;MLEAC=1;MLEAF=0.500;MQ=57.87;MQRankSum=-8.562;QD=4.08;ReadPosRankSum=-0.610;SOR=0.010 GT:AD:DP:GQ:PL 0/1:68,14:82:99:363,0,2813 chr2 70297346 . G A 288.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.145;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=12.730;MLEAC=1;MLEAF=0.500;MQ=58.31;MQRankSum=-8.712;QD=2.39;ReadPosRankSum=-0.521;SOR=0.127 GT:AD:DP:GQ:PL 0/1:99,22:121:99:317,0,3107 chr2 70301695 . G A 5224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.074;ClippingRankSum=0.000;DP=394;ExcessHet=3.0103;FS=0.756;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=0.407;SOR=0.742 GT:AD:DP:GQ:PL 0/1:202,192:394:99:5253,0,5595 chr2 70302482 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 70343212 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 70411217 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 70441453 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 70448966 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 70450862 . G A 3262.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.362;ClippingRankSum=0.000;DP=233;ExcessHet=3.0103;FS=1.019;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.00;ReadPosRankSum=-0.553;SOR=0.796 GT:AD:DP:GQ:PL 0/1:112,121:233:99:3291,0,2923 chr2 70451041 . C A 1547.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.210;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=2.355;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.59;ReadPosRankSum=-0.356;SOR=0.440 GT:AD:DP:GQ:PL 0/1:37,42:79:99:1576,0,1367 chr2 70451044 . G A 1475.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.816;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.08;ReadPosRankSum=0.319;SOR=0.760 GT:AD:DP:GQ:PL 0/1:34,36:70:99:1504,0,1373 chr2 70451935 . G A 1114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.127;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=2.356;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.61;ReadPosRankSum=0.013;SOR=1.025 GT:AD:DP:GQ:PL 0/1:57,39:96:99:1143,0,1806 chr2 70456621 . T C 1067.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.146;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.50;ReadPosRankSum=1.523;SOR=0.495 GT:AD:DP:GQ:PL 0/1:27,34:61:99:1096,0,829 chr2 70465425 . C T 375.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.502;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.39;ReadPosRankSum=-0.723;SOR=0.830 GT:AD:DP:GQ:PL 0/1:25,15:40:99:404,0,720 chr2 70477379 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 70488656 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 70552919 . G A 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=0.983;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,179 chr2 70637371 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 70637372 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 70674653 . A G 783.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.519;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=1.379;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.23;ReadPosRankSum=-0.390;SOR=0.377 GT:AD:DP:GQ:PL 0/1:23,20:43:99:812,0,1677 chr2 70677967 . T G 1341.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.874;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=1.116;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=0.173;SOR=0.473 GT:AD:DP:GQ:PL 0/1:45,47:92:99:1370,0,1371 chr2 70690680 . C T 1112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.671;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=0.770;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.68;ReadPosRankSum=2.350;SOR=0.825 GT:AD:DP:GQ:PL 0/1:60,55:115:99:1141,0,1599 chr2 70706527 . T A 919.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.711;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.14;ReadPosRankSum=-0.259;SOR=0.209 GT:AD:DP:GQ:PL 0/1:25,32:57:99:948,0,800 chr2 70768101 . G A 641.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.366;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.65;ReadPosRankSum=-0.374;SOR=0.557 GT:AD:DP:GQ:PL 0/1:22,19:41:99:670,0,761 chr2 70777360 . T C 706.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.246;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=4.575;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.67;ReadPosRankSum=0.623;SOR=1.473 GT:AD:DP:GQ:PL 0/1:21,19:40:99:735,0,907 chr2 70777362 . A T 706.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.246;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=4.575;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.67;ReadPosRankSum=0.800;SOR=1.473 GT:AD:DP:GQ:PL 0/1:21,19:40:99:735,0,907 chr2 70777969 . C G 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.44;ReadPosRankSum=0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:70:70,0,71 chr2 70785472 . G A 1510.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.236;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=0.630;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.79;ReadPosRankSum=-0.189;SOR=0.785 GT:AD:DP:GQ:PL 0/1:78,62:140:99:1539,0,2076 chr2 70785602 . C G 1129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.136;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=3.622;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.00;ReadPosRankSum=-0.556;SOR=1.059 GT:AD:DP:GQ:PL 0/1:69,44:113:99:1158,0,1866 chr2 70790197 . A G 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=-1.180;SOR=0.527 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,105 chr2 70790384 . A G 1714.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.169;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=3.365;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.50;ReadPosRankSum=-1.383;SOR=1.003 GT:AD:DP:GQ:PL 0/1:62,65:127:99:1743,0,1671 chr2 70797774 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 70816329 . C T 1187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.478;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=1.843;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.85;ReadPosRankSum=-0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:40,40:80:99:1216,0,1191 chr2 70817079 . C T 1152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.607;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=-0.948;SOR=0.708 GT:AD:DP:GQ:PL 0/1:61,45:106:99:1181,0,1571 chr2 70819167 . T C 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-0.697;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr2 70820139 . A C 154.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.097;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=2.632;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.07;ReadPosRankSum=-0.054;SOR=1.802 GT:AD:DP:GQ:PL 0/1:5,6:11:99:183,0,175 chr2 70820278 . C G 1613.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.487;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.52;ReadPosRankSum=-0.198;SOR=0.610 GT:AD:DP:GQ:PL 0/1:46,58:104:99:1642,0,1354 chr2 70831095 . C T 1407.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.022;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=0.643;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.35;ReadPosRankSum=-0.182;SOR=0.804 GT:AD:DP:GQ:PL 0/1:76,60:136:99:1436,0,2029 chr2 70831704 . A G 2300.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.739;ClippingRankSum=0.000;DP=165;ExcessHet=3.0103;FS=0.663;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.94;ReadPosRankSum=1.792;SOR=0.774 GT:AD:DP:GQ:PL 0/1:82,83:165:99:2329,0,2366 chr2 70833977 . G A 1867.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.756;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.15;ReadPosRankSum=-0.751;SOR=0.680 GT:AD:DP:GQ:PL 0/1:65,67:132:99:1896,0,1654 chr2 70835404 . G A 749.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.223;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.22;ReadPosRankSum=0.908;SOR=0.968 GT:AD:DP:GQ:PL 0/1:17,22:39:99:778,0,581 chr2 70835517 . G A 2378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.472;ClippingRankSum=0.000;DP=198;ExcessHet=3.0103;FS=0.559;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.01;ReadPosRankSum=-0.458;SOR=0.645 GT:AD:DP:GQ:PL 0/1:107,91:198:99:2407,0,2998 chr2 70835936 . A G 1464.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.406;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=6.833;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.65;ReadPosRankSum=-1.527;SOR=1.550 GT:AD:DP:GQ:PL 0/1:41,47:88:99:1493,0,1093 chr2 70900566 . G T 182.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=3.358;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.06;ReadPosRankSum=1.105;SOR=0.132 GT:AD:DP:GQ:PL 0/1:7,6:13:99:211,0,253 chr2 70920915 . C T 747.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.697;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=3.303;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.99;ReadPosRankSum=-1.821;SOR=1.410 GT:AD:DP:GQ:PL 0/1:19,25:44:99:776,0,525 chr2 70933291 . G C 1386.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.318;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=4.280;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.75;ReadPosRankSum=0.590;SOR=0.345 GT:AD:DP:GQ:PL 0/1:65,53:118:99:1415,0,1950 chr2 70935866 . A G 1712.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.548;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=0.729;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.92;ReadPosRankSum=0.764;SOR=0.779 GT:AD:DP:GQ:PL 0/1:63,60:123:99:1741,0,1795 chr2 70936043 . C T 2598.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.619;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=0.534;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=1.240;SOR=0.762 GT:AD:DP:GQ:PL 0/1:96,100:196:99:2627,0,2595 chr2 70948515 . G A 1426.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.188;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=1.928;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.59;ReadPosRankSum=0.921;SOR=0.444 GT:AD:DP:GQ:PL 0/1:34,52:86:99:1455,0,855 chr2 70948586 . A G 649.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.568;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.07;ReadPosRankSum=-1.685;SOR=1.781 GT:AD:DP:GQ:PL 0/1:8,19:27:99:678,0,253 chr2 70948712 . A G 133.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:161,12,0 chr2 70951724 . C G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 70958261 . A C 4574.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.615;ClippingRankSum=0.000;DP=357;ExcessHet=3.0103;FS=2.254;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.81;ReadPosRankSum=-0.175;SOR=0.575 GT:AD:DP:GQ:PL 0/1:189,168:357:99:4603,0,5187 chr2 70959252 . G A 2052.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.223;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=3.369;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.56;ReadPosRankSum=-0.680;SOR=1.034 GT:AD:DP:GQ:PL 0/1:68,73:141:99:2081,0,1829 chr2 70960781 . G A 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=-0.319;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,258 chr2 70961185 . G A 744.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.203;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.46;ReadPosRankSum=0.491;SOR=0.593 GT:AD:DP:GQ:PL 0/1:41,24:65:99:773,0,1441 chr2 70961331 . G C 148.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.304;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.44;ReadPosRankSum=1.555;SOR=1.179 GT:AD:DP:GQ:PL 0/1:7,6:13:99:177,0,241 chr2 70962595 . G A 316.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.283;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.20;ReadPosRankSum=1.441;SOR=1.244 GT:AD:DP:GQ:PL 0/1:14,10:24:99:345,0,470 chr2 70963254 . C T 2575.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.231;ClippingRankSum=0.000;DP=195;ExcessHet=3.0103;FS=1.106;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.21;ReadPosRankSum=0.245;SOR=0.792 GT:AD:DP:GQ:PL 0/1:94,101:195:99:2604,0,2351 chr2 70963415 . G A 1243.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.498;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.74;ReadPosRankSum=1.569;SOR=0.758 GT:AD:DP:GQ:PL 0/1:42,37:79:99:1272,0,1515 chr2 70964647 . C T 1512.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.666;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.41;ReadPosRankSum=-0.543;SOR=0.633 GT:AD:DP:GQ:PL 0/1:59,46:105:99:1541,0,2037 chr2 70978846 . A G 1641.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.841;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.833;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.47;ReadPosRankSum=0.223;SOR=0.530 GT:AD:DP:GQ:PL 0/1:34,60:94:99:1670,0,872 chr2 70978928 . A C 889.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.544;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.18;ReadPosRankSum=-1.044;SOR=0.771 GT:AD:DP:GQ:PL 0/1:17,25:42:99:918,0,513 chr2 70979137 . G A 2217.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=154;ExcessHet=3.0103;FS=0.685;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.59;ReadPosRankSum=-1.144;SOR=0.627 GT:AD:DP:GQ:PL 0/1:78,74:152:99:2246,0,2285 chr2 70980583 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.29;ReadPosRankSum=0.842;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,2:6:72:72,0,180 chr2 70980587 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.29;ReadPosRankSum=1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,2:6:72:72,0,180 chr2 70981714 . A G 1357.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.296;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.76;ReadPosRankSum=0.613;SOR=0.678 GT:AD:DP:GQ:PL 0/1:33,48:81:99:1386,0,897 chr2 70984331 . T A 1613.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.768;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=14.301;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.16;ReadPosRankSum=-1.211;SOR=0.247 GT:AD:DP:GQ:PL 0/1:55,59:114:99:1642,0,1653 chr2 70984859 . A G 6177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.155;ClippingRankSum=0.000;DP=461;ExcessHet=3.0103;FS=1.740;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.46;ReadPosRankSum=-2.312;SOR=0.746 GT:AD:DP:GQ:PL 0/1:228,231:459:99:6206,0,5921 chr2 70985000 . C T 5164.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.384;ClippingRankSum=0.000;DP=345;ExcessHet=3.0103;FS=1.276;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.01;ReadPosRankSum=-2.337;SOR=0.610 GT:AD:DP:GQ:PL 0/1:160,184:344:99:5193,0,4483 chr2 70988487 . A G 554.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.774;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.53;ReadPosRankSum=0.458;SOR=0.418 GT:AD:DP:GQ:PL 0/1:24,17:41:99:583,0,810 chr2 70988811 . G A 1376.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.532;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=1.845;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.79;ReadPosRankSum=0.158;SOR=0.497 GT:AD:DP:GQ:PL 0/1:40,42:82:99:1405,0,1326 chr2 70994429 . A G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:78,0,33 chr2 70994692 . A G 2698.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.422;ClippingRankSum=0.000;DP=288;ExcessHet=3.0103;FS=0.435;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.37;ReadPosRankSum=-0.275;SOR=0.653 GT:AD:DP:GQ:PL 0/1:171,117:288:99:2727,0,4614 chr2 71016825 . T C 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.65;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 71029294 . T C 850.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.996;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.896;MLEAC=1;MLEAF=0.500;MQ=59.79;MQRankSum=0.000;QD=11.82;ReadPosRankSum=-1.579;SOR=0.927 GT:AD:DP:GQ:PL 0/1:36,36:72:99:879,0,1019 chr2 71037661 . T C 241.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.04;QD=31.63;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:270,18,0 chr2 71037665 . T G 283.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.32;QD=33.76;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:312,21,0 chr2 71037819 . T C 1403.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.89;QD=33.42;SOR=1.556 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1432,126,0 chr2 71038057 . G T 2265.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.81;SOR=1.194 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2294,228,0 chr2 71038587 . C T 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr2 71055392 . A G 160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.643;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=3.532;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.36;ReadPosRankSum=-0.628;SOR=0.617 GT:AD:DP:GQ:PL 0/1:21,9:30:99:189,0,617 chr2 71055452 . G A 163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.254;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=2.003;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=-1.226;SOR=0.669 GT:AD:DP:GQ:PL 0/1:11,7:18:99:192,0,325 chr2 71055474 . A G 173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.916;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.65;ReadPosRankSum=0.134;SOR=0.859 GT:AD:DP:GQ:PL 0/1:10,8:18:99:202,0,318 chr2 71055503 . C T 343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=1.493;SOR=0.446 GT:AD:DP:GQ:PL 0/1:10,13:23:99:372,0,275 chr2 71055566 . G A 298.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.274;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=1.740;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.94;ReadPosRankSum=-0.310;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,12:20:99:327,0,240 chr2 71055998 . G A 121.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.262;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.60;MQRankSum=-1.383;QD=13.53;ReadPosRankSum=-0.231;SOR=1.179 GT:AD:DP:GQ:PL 0/1:5,4:9:99:150,0,345 chr2 71056117 . G A 126.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.015;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.65;MQRankSum=-1.559;QD=14.09;ReadPosRankSum=0.480;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,6:9:64:155,0,64 chr2 71070267 . G A 93.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.25;ReadPosRankSum=0.609;SOR=0.160 GT:AD:DP:GQ:PL 0/1:11,4:15:99:122,0,414 chr2 71070852 . C T 4976.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.768;ClippingRankSum=0.000;DP=364;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.75;ReadPosRankSum=0.054;SOR=0.671 GT:AD:DP:GQ:PL 0/1:168,194:362:99:5005,0,4447 chr2 71073386 . T C 957.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.340;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=1.100;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.12;ReadPosRankSum=-0.006;SOR=1.015 GT:AD:DP:GQ:PL 0/1:41,32:73:99:986,0,1296 chr2 71076994 . C T 118.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.76;ReadPosRankSum=-0.524;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:147,0,27 chr2 71078137 . T C 400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.70;ReadPosRankSum=0.032;SOR=0.693 GT:AD:DP:GQ:PL 0/1:12,12:24:99:429,0,429 chr2 71078326 . C T 1574.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.195;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.84;ReadPosRankSum=1.072;SOR=0.745 GT:AD:DP:GQ:PL 0/1:72,61:133:99:1603,0,1971 chr2 71089013 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.10;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 71089160 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.52;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 71110073 . C T 1074.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.946;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=1.866;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=-0.068;SOR=0.974 GT:AD:DP:GQ:PL 0/1:39,43:82:99:1103,0,895 chr2 71124357 . G A 1860.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.287;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=3.208;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.20;ReadPosRankSum=0.294;SOR=0.981 GT:AD:DP:GQ:PL 0/1:68,63:131:99:1889,0,1928 chr2 71124649 . T C 588.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.224;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.84;ReadPosRankSum=0.978;SOR=0.892 GT:AD:DP:GQ:PL 0/1:15,18:33:99:617,0,488 chr2 71130287 . C A 5547.77 PASS AC=2;AF=1.00;AN=2;DP=203;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.51;SOR=1.149 GT:AD:DP:GQ:PL 1/1:0,188:188:99:5576,546,0 chr2 71130504 . C T 2685.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.75;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2714,246,0 chr2 71130580 . G C 1431.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.858;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=-0.739;SOR=0.681 GT:AD:DP:GQ:PL 0/1:37,55:92:99:1460,0,951 chr2 71133014 . A C 544.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.031;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.02;ReadPosRankSum=2.117;SOR=1.264 GT:AD:DP:GQ:PL 0/1:17,17:34:99:573,0,573 chr2 71133495 . G T 475.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.227;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=5.170;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.42;ReadPosRankSum=0.711;SOR=1.444 GT:AD:DP:GQ:PL 0/1:15,18:33:99:504,0,458 chr2 71133593 . A G 1138.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.85;SOR=1.528 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1167,81,0 chr2 71133843 . A C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-1.036;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,76 chr2 71134202 . T G 1086.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.246;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=1.005;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.98;ReadPosRankSum=-1.250;SOR=0.560 GT:AD:DP:GQ:PL 0/1:25,39:64:99:1115,0,665 chr2 71138546 . G A 1359.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.924;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=8.151;MLEAC=1;MLEAF=0.500;MQ=59.75;MQRankSum=0.000;QD=18.13;ReadPosRankSum=-0.661;SOR=1.811 GT:AD:DP:GQ:PL 0/1:32,43:75:99:1388,0,861 chr2 71138868 . C T 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=1.006;SOR=0.148 GT:AD:DP:GQ:PL 0/1:4,4:8:99:109,0,143 chr2 71144841 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 71147935 . A C 444.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.504;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.88;ReadPosRankSum=-0.444;SOR=0.834 GT:AD:DP:GQ:PL 0/1:28,17:45:99:473,0,820 chr2 71149071 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 71149679 . T C 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=-0.180;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,4:7:99:112,0,104 chr2 71149869 . G A 967.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.897;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=3.131;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.57;ReadPosRankSum=-0.661;SOR=0.378 GT:AD:DP:GQ:PL 0/1:37,40:77:99:996,0,1042 chr2 71154217 . A C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 71155672 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 71161440 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.03;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 71166171 . A C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 71174663 . A G 222.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.85;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:251,24,0 chr2 71178448 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 71178646 . C T 705.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.027;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=6.856;MLEAC=1;MLEAF=0.500;MQ=55.64;MQRankSum=1.252;QD=15.68;ReadPosRankSum=0.247;SOR=1.802 GT:AD:DP:GQ:PL 0/1:19,26:45:99:734,0,454 chr2 71188349 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 71189935 . G T 3094.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.64;SOR=1.154 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3123,279,0 chr2 71190004 . C T 735.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.789;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=3.127;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.91;ReadPosRankSum=1.844;SOR=1.418 GT:AD:DP:GQ:PL 0/1:32,25:57:99:764,0,1000 chr2 71202761 . C T 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr2 71276848 . T C 893.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.702;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=3.794;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.96;ReadPosRankSum=0.498;SOR=1.292 GT:AD:DP:GQ:PL 0/1:25,31:56:99:922,0,669 chr2 71363834 . C G 313.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:342,27,0 chr2 71365314 . G T 226.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.40;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:255,21,0 chr2 71377228 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 71377336 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 71380409 . G A 531.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.11;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:42:560,42,0 chr2 71382483 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 71388441 . C T 2309.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.73;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2338,175,0 chr2 71393688 . C T 3287.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.61;SOR=2.044 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3316,285,0 chr2 71393965 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 71400409 . C T 1669.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.92;SOR=1.567 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1698,162,0 chr2 71400730 . G T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.77;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 71406145 . T C 2602.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.62;SOR=1.528 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2631,255,0 chr2 71406259 . C T 2178.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.52;SOR=1.828 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2207,201,0 chr2 71408801 . G T 878.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.38;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,28:28:84:907,84,0 chr2 71408906 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.65;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 71418698 . G A 894.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.14;SOR=1.781 GT:AD:DP:GQ:PL 1/1:0,27:27:81:923,81,0 chr2 71418760 . G C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.30;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 71418816 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 71481680 . T G 861.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=3.352 GT:AD:DP:GQ:PL 1/1:0,23:23:69:890,69,0 chr2 71483214 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 71488988 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 71553981 . A G 2318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.480;ClippingRankSum=0.000;DP=169;ExcessHet=3.0103;FS=3.063;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=0.999;SOR=0.485 GT:AD:DP:GQ:PL 0/1:80,87:167:99:2347,0,2316 chr2 71568022 . A T 4240.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.509;ClippingRankSum=0.000;DP=347;ExcessHet=3.0103;FS=2.843;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.22;ReadPosRankSum=3.210;SOR=0.843 GT:AD:DP:GQ:PL 0/1:189,158:347:99:4269,0,5417 chr2 71570582 . G A 2934.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.94;SOR=2.038 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2963,252,0 chr2 71570632 . G A 1740.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.117;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=0.618;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=-0.238;SOR=0.620 GT:AD:DP:GQ:PL 0/1:80,69:149:99:1769,0,2120 chr2 71572517 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 71575495 . C G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 71576559 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 71576687 . G T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 71589472 . G C 1779.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.97;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1808,126,0 chr2 71589481 . T C 897.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.900;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.32;ReadPosRankSum=0.011;SOR=0.257 GT:AD:DP:GQ:PL 0/1:23,26:49:99:926,0,813 chr2 71589873 . A G 1311.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.08;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1340,102,0 chr2 71590441 . A T 1225.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.125;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.18;ReadPosRankSum=1.933;SOR=0.598 GT:AD:DP:GQ:PL 0/1:51,42:93:99:1254,0,1573 chr2 71598947 . T C 186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.207;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=-0.172;SOR=1.863 GT:AD:DP:GQ:PL 0/1:6,6:12:99:215,0,179 chr2 71601293 . A T 1859.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.480;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=1.448;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.46;ReadPosRankSum=1.592;SOR=0.466 GT:AD:DP:GQ:PL 0/1:57,56:113:99:1888,0,1987 chr2 71602691 . G T 884.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.957;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=3.320;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=0.257;SOR=1.106 GT:AD:DP:GQ:PL 0/1:41,32:73:99:913,0,1055 chr2 71605374 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 71605437 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 71611166 . C T 695.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.011;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.92;ReadPosRankSum=-0.168;SOR=0.693 GT:AD:DP:GQ:PL 0/1:25,25:50:99:724,0,723 chr2 71611313 . C T 2180.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.996;ClippingRankSum=0.000;DP=176;ExcessHet=3.0103;FS=0.551;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.39;ReadPosRankSum=-0.779;SOR=0.746 GT:AD:DP:GQ:PL 0/1:90,86:176:99:2209,0,2243 chr2 71611333 . G T 2318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.493;ClippingRankSum=0.000;DP=189;ExcessHet=3.0103;FS=0.535;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.27;ReadPosRankSum=0.383;SOR=0.772 GT:AD:DP:GQ:PL 0/1:100,89:189:99:2347,0,2506 chr2 71611722 . C T 745.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.731;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=2.057;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.76;ReadPosRankSum=-0.267;SOR=0.317 GT:AD:DP:GQ:PL 0/1:18,24:42:99:774,0,577 chr2 71611745 . A G 476.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.110;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.44;ReadPosRankSum=-1.366;SOR=0.765 GT:AD:DP:GQ:PL 0/1:14,15:29:99:505,0,463 chr2 71613088 . C T 373.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.969;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=1.308;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.69;ReadPosRankSum=0.355;SOR=0.412 GT:AD:DP:GQ:PL 0/1:28,15:43:99:402,0,858 chr2 71615696 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 71620813 . C A 435.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.224;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=1.143;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.26;ReadPosRankSum=-0.841;SOR=0.887 GT:AD:DP:GQ:PL 0/1:43,17:60:99:464,0,1115 chr2 71643909 . A G 3661.77 PASS AC=2;AF=1.00;AN=2;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.41;SOR=1.336 GT:AD:DP:GQ:PL 1/1:0,113:113:99:3690,338,0 chr2 71644106 . A G 1712.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.99;SOR=3.516 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1741,135,0 chr2 71654520 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 71659930 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 71661971 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 71662026 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 71664106 . C T 485.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.342;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.75;ReadPosRankSum=-0.852;SOR=0.760 GT:AD:DP:GQ:PL 0/1:14,15:29:99:514,0,496 chr2 71664231 . C T 5126.77 PASS AC=2;AF=1.00;AN=2;DP=157;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.08;SOR=1.625 GT:AD:DP:GQ:PL 1/1:0,155:155:99:5155,464,0 chr2 71669945 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 71671975 . C A 134.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:163,15,0 chr2 71674156 . C T 2041.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.03;SOR=2.546 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2070,180,0 chr2 71679041 . T C 6861.77 PASS AC=2;AF=1.00;AN=2;DP=200;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.31;SOR=2.186 GT:AD:DP:GQ:PL 1/1:0,200:200:99:6890,601,0 chr2 71679148 . A C 4431.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.283;ClippingRankSum=0.000;DP=365;ExcessHet=3.0103;FS=2.748;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.18;ReadPosRankSum=-0.622;SOR=0.771 GT:AD:DP:GQ:PL 0/1:187,177:364:99:4460,0,4695 chr2 71680800 . G T 699.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.21;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,18:18:54:728,54,0 chr2 71682692 . C T 746.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.385;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=2.171;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.70;ReadPosRankSum=-0.355;SOR=1.040 GT:AD:DP:GQ:PL 0/1:48,29:77:99:775,0,1399 chr2 71701692 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 71703534 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 71703811 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 71704901 . C T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 71711058 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 71802410 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 71802417 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 71848345 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 71852602 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 72086756 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 72132183 . A G 421.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.582;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.17;ReadPosRankSum=0.559;SOR=0.776 GT:AD:DP:GQ:PL 0/1:8,14:22:99:450,0,267 chr2 72132389 . A G 3433.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.427;ClippingRankSum=0.000;DP=229;ExcessHet=3.0103;FS=9.514;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=0.008;SOR=0.320 GT:AD:DP:GQ:PL 0/1:106,123:229:99:3462,0,3048 chr2 72134736 . C A 932.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.234;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=1.103;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.92;ReadPosRankSum=0.746;SOR=0.988 GT:AD:DP:GQ:PL 0/1:34,33:67:99:961,0,912 chr2 72134831 . A G 2013.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.553;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=1.229;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.35;ReadPosRankSum=-1.645;SOR=0.824 GT:AD:DP:GQ:PL 0/1:82,81:163:99:2042,0,2236 chr2 72147306 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 72183874 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:59:72,0,59 chr2 72558476 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 72717884 . T G 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr2 72914569 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.19;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 72924102 . C T 1616.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.34;SOR=2.124 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1645,150,0 chr2 72938105 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 72940815 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 72945316 . A G 189.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.64;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:218,18,0 chr2 72999381 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 73053027 . A T 74.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=0.000;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:103,0,68 chr2 73053174 . G A 472.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.055;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=1.978;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.49;ReadPosRankSum=-0.649;SOR=0.368 GT:AD:DP:GQ:PL 0/1:6,16:22:99:501,0,104 chr2 73112302 . T G 4068.77 PASS AC=2;AF=1.00;AN=2;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.59;SOR=1.406 GT:AD:DP:GQ:PL 1/1:0,133:133:99:4097,398,0 chr2 73112580 . G A 6475.77 PASS AC=2;AF=1.00;AN=2;DP=194;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.55;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,193:193:99:6504,578,0 chr2 73130399 . T G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 73130477 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 73157668 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 73175912 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 73194335 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 73203106 . T C 357.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.110;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.475;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.18;ReadPosRankSum=-0.363;SOR=0.412 GT:AD:DP:GQ:PL 0/1:18,14:32:99:386,0,519 chr2 73208473 . T C 2215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.576;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=1.668;SOR=0.740 GT:AD:DP:GQ:PL 0/1:78,85:163:99:2244,0,1984 chr2 73210297 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 73220647 . A G 4547.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.417;ClippingRankSum=0.000;DP=407;ExcessHet=3.0103;FS=2.429;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.17;ReadPosRankSum=0.027;SOR=0.534 GT:AD:DP:GQ:PL 0/1:211,196:407:99:4576,0,5457 chr2 73221046 . C T 1115.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.329;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=8.684;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.30;ReadPosRankSum=-0.436;SOR=1.821 GT:AD:DP:GQ:PL 0/1:39,39:78:99:1144,0,1162 chr2 73230424 . C T 332.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.608;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.51;ReadPosRankSum=-0.450;SOR=0.793 GT:AD:DP:GQ:PL 0/1:9,10:19:99:361,0,275 chr2 73243369 . T C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.71;ReadPosRankSum=-0.291;SOR=0.105 GT:AD:DP:GQ:PL 0/1:14,4:18:99:113,0,526 chr2 73244884 . G A 1778.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.560;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=2.363;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.53;ReadPosRankSum=-0.127;SOR=1.165 GT:AD:DP:GQ:PL 0/1:40,56:96:99:1807,0,1105 chr2 73250805 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 73263284 . A G 1237.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.167;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=3.637;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=1.287;SOR=1.059 GT:AD:DP:GQ:PL 0/1:60,46:106:99:1266,0,1512 chr2 73264555 . G A 1459.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.208;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=5.362;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.48;ReadPosRankSum=0.780;SOR=0.199 GT:AD:DP:GQ:PL 0/1:33,46:79:99:1488,0,1107 chr2 73265094 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:71:72,0,71 chr2 73265486 . A T 2017.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.781;ClippingRankSum=0.000;DP=167;ExcessHet=3.0103;FS=1.227;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.16;ReadPosRankSum=0.647;SOR=0.838 GT:AD:DP:GQ:PL 0/1:93,73:166:99:2046,0,2658 chr2 73370590 . A G 171.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.242;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=5.167;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=-0.449;SOR=2.276 GT:AD:DP:GQ:PL 0/1:11,6:17:99:200,0,306 chr2 73370964 . T C 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 73386213 . G A 972.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.058;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.44;ReadPosRankSum=0.026;SOR=0.757 GT:AD:DP:GQ:PL 0/1:29,34:63:99:1001,0,836 chr2 73386430 . C G 38.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.93;ReadPosRankSum=0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:26:67,0,26 chr2 73404084 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 73422800 . G A 429.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.317;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=2.299;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.69;ReadPosRankSum=0.570;SOR=1.609 GT:AD:DP:GQ:PL 0/1:8,15:23:99:458,0,165 chr2 73422994 . T A 507.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.666;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.201;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.58;ReadPosRankSum=-1.012;SOR=0.495 GT:AD:DP:GQ:PL 0/1:26,22:48:99:536,0,703 chr2 73424261 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 73424839 . C T 1054.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.256;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=0.854;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=-1.189;SOR=0.588 GT:AD:DP:GQ:PL 0/1:34,42:76:99:1083,0,817 chr2 73426204 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 73448542 . T G 4469.77 PASS AC=2;AF=1.00;AN=2;DP=134;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.36;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4498,402,0 chr2 73448717 . C T 1710.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.255;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=7.329;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.27;ReadPosRankSum=1.983;SOR=0.880 GT:AD:DP:GQ:PL 0/1:53,59:112:99:1739,0,1517 chr2 73450706 . A G 2121.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.261;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.79;ReadPosRankSum=0.490;SOR=0.663 GT:AD:DP:GQ:PL 0/1:100,80:180:99:2150,0,2865 chr2 73450771 . G C 2672.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.434;ClippingRankSum=0.000;DP=210;ExcessHet=3.0103;FS=8.026;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=-1.421;SOR=1.190 GT:AD:DP:GQ:PL 0/1:118,92:210:99:2701,0,3594 chr2 73452153 . A G 2264.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.376;ClippingRankSum=0.000;DP=195;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.61;ReadPosRankSum=0.605;SOR=0.681 GT:AD:DP:GQ:PL 0/1:115,80:195:99:2293,0,2921 chr2 73452739 . T C 944.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.829;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.797;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.27;ReadPosRankSum=0.501;SOR=0.787 GT:AD:DP:GQ:PL 0/1:58,34:92:99:973,0,1766 chr2 73452863 . T A 1144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.605;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.87;ReadPosRankSum=-0.215;SOR=0.717 GT:AD:DP:GQ:PL 0/1:65,51:116:99:1173,0,1877 chr2 73453381 . G C 1039.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.186;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.960;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.25;ReadPosRankSum=-2.020;SOR=0.922 GT:AD:DP:GQ:PL 0/1:29,35:64:99:1068,0,917 chr2 73490440 . G T 1241.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.157;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.80;ReadPosRankSum=0.898;SOR=0.697 GT:AD:DP:GQ:PL 0/1:45,45:90:99:1270,0,1393 chr2 73490529 . A G 1161.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.316;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=2.610;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.74;ReadPosRankSum=-0.734;SOR=0.561 GT:AD:DP:GQ:PL 0/1:56,43:99:99:1190,0,1504 chr2 73519796 . C T 313.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.910;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=9.140;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.05;ReadPosRankSum=-0.575;SOR=2.670 GT:AD:DP:GQ:PL 0/1:28,11:39:99:342,0,813 chr2 73534754 . G A 587.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.211;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.59;ReadPosRankSum=-0.052;SOR=0.976 GT:AD:DP:GQ:PL 0/1:13,17:30:99:616,0,437 chr2 73535078 . T G 321.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.215;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.87;ReadPosRankSum=1.454;SOR=0.960 GT:AD:DP:GQ:PL 0/1:14,11:25:99:350,0,471 chr2 73535109 . A G 190.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.105;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.67;ReadPosRankSum=0.088;SOR=0.223 GT:AD:DP:GQ:PL 0/1:6,7:13:99:219,0,211 chr2 73601183 . T C 951.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.167;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=4.446;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.22;ReadPosRankSum=0.914;SOR=0.247 GT:AD:DP:GQ:PL 0/1:38,34:72:99:980,0,1202 chr2 73601411 . G A 2019.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.193;ClippingRankSum=0.000;DP=191;ExcessHet=3.0103;FS=7.206;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.57;ReadPosRankSum=0.125;SOR=0.382 GT:AD:DP:GQ:PL 0/1:107,84:191:99:2048,0,2948 chr2 73602245 . C T 3322.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.900;ClippingRankSum=0.000;DP=304;ExcessHet=3.0103;FS=2.539;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.93;ReadPosRankSum=-1.043;SOR=0.544 GT:AD:DP:GQ:PL 0/1:157,147:304:99:3351,0,3956 chr2 73602551 . C T 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.139;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.56;ReadPosRankSum=-0.168;SOR=0.223 GT:AD:DP:GQ:PL 0/1:8,4:12:99:131,0,251 chr2 73620774 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 73625930 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 73640735 . G C 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=0.108;SOR=1.022 GT:AD:DP:GQ:PL 0/1:3,4:7:99:112,0,104 chr2 73640770 . A G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.14;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 73641201 . A G 6365.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.373;ClippingRankSum=0.000;DP=455;ExcessHet=3.0103;FS=1.775;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=1.091;SOR=0.565 GT:AD:DP:GQ:PL 0/1:222,233:455:99:6394,0,5907 chr2 73648561 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 73648575 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 73670991 . C T 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.057;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.963;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.91;ReadPosRankSum=1.279;SOR=1.981 GT:AD:DP:GQ:PL 0/1:10,4:14:99:125,0,273 chr2 73671232 . G A 382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.92;ReadPosRankSum=0.000;SOR=0.610 GT:AD:DP:GQ:PL 0/1:5,11:16:99:411,0,161 chr2 73671293 . A G 122.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.56;ReadPosRankSum=0.000;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:151,0,27 chr2 73672486 . T G 561.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.38;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:590,45,0 chr2 73672828 . G T 3827.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.90;SOR=1.903 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3856,359,0 chr2 73673083 . A G 2146.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.52;SOR=3.461 GT:AD:DP:GQ:PL 1/1:0,57:57:99:2175,171,0 chr2 73673202 . G A 259.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:288,24,0 chr2 73673717 . C G 563.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.10;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:592,45,0 chr2 73673773 . T C 561.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.160;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=6.591;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.04;ReadPosRankSum=0.054;SOR=0.072 GT:AD:DP:GQ:PL 0/1:21,19:40:99:590,0,757 chr2 73685129 . G A 95.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.371;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.11;MQRankSum=-2.360;QD=3.99;ReadPosRankSum=-1.781;SOR=0.336 GT:AD:DP:GQ:PL 0/1:19,5:24:99:124,0,657 chr2 73700804 . A G 4181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.883;ClippingRankSum=0.000;DP=289;ExcessHet=3.0103;FS=2.564;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.47;ReadPosRankSum=-0.150;SOR=0.560 GT:AD:DP:GQ:PL 0/1:147,142:289:99:4210,0,4140 chr2 73700971 . C G 6990.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.570;ClippingRankSum=0.000;DP=536;ExcessHet=3.0103;FS=1.102;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.04;ReadPosRankSum=-0.603;SOR=0.586 GT:AD:DP:GQ:PL 0/1:274,262:536:99:7019,0,7845 chr2 73701239 . G C 6104.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.266;ClippingRankSum=0.000;DP=489;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.48;ReadPosRankSum=-0.211;SOR=0.658 GT:AD:DP:GQ:PL 0/1:264,225:489:99:6133,0,7356 chr2 73717918 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.39;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 73732808 . T A 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.049;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.22;ReadPosRankSum=0.852;SOR=0.586 GT:AD:DP:GQ:PL 0/1:10,7:17:99:253,0,454 chr2 73732833 . G T 240.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.043;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.05;ReadPosRankSum=0.663;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,8:15:99:269,0,370 chr2 73766947 . G A 2604.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.56;SOR=1.552 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2633,239,0 chr2 73773574 . C T 90.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=6.117;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.67;ReadPosRankSum=1.550;SOR=0.072 GT:AD:DP:GQ:PL 0/1:12,4:16:99:119,0,452 chr2 73780009 . T C 3293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.708;ClippingRankSum=0.000;DP=240;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.72;ReadPosRankSum=0.703;SOR=0.727 GT:AD:DP:GQ:PL 0/1:120,120:240:99:3322,0,3225 chr2 73780218 . A G 2268.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.311;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=4.494;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.60;ReadPosRankSum=-1.669;SOR=1.033 GT:AD:DP:GQ:PL 0/1:95,85:180:99:2297,0,2688 chr2 73808753 . A G 1019.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.310;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.66;MQRankSum=-0.040;QD=28.33;ReadPosRankSum=-0.517;SOR=1.085 GT:AD:DP:GQ:PL 1/1:2,34:36:59:1048,59,0 chr2 73831090 . C G 2097.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.981;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=2.196;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.80;ReadPosRankSum=-1.320;SOR=0.911 GT:AD:DP:GQ:PL 0/1:77,75:152:99:2126,0,1918 chr2 73859560 . C A 298.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.92;ReadPosRankSum=-0.822;SOR=1.112 GT:AD:DP:GQ:PL 0/1:6,9:15:99:327,0,205 chr2 73860163 . T C 1137.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.489;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.10;ReadPosRankSum=-0.904;SOR=0.612 GT:AD:DP:GQ:PL 0/1:50,44:94:99:1166,0,1497 chr2 73885843 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 73897401 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 73900162 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 73901234 . T G 5424.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.65;SOR=2.061 GT:AD:DP:GQ:PL 1/1:0,121:121:99:5453,370,0 chr2 73901242 . G A 5774.77 PASS AC=2;AF=1.00;AN=2;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.93;SOR=1.798 GT:AD:DP:GQ:PL 1/1:0,131:131:99:5803,400,0 chr2 73901264 . G C 5386.77 PASS AC=2;AF=1.00;AN=2;DP=164;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.05;SOR=1.287 GT:AD:DP:GQ:PL 1/1:0,163:163:99:5415,489,0 chr2 73901306 . C T 6459.77 PASS AC=2;AF=1.00;AN=2;DP=207;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.21;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,207:207:99:6488,619,0 chr2 73902347 . T C 893.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.57;SOR=4.892 GT:AD:DP:GQ:PL 1/1:0,23:23:69:922,69,0 chr2 73902537 . A G 4132.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.33;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,124:124:99:4161,372,0 chr2 73902585 . C G 4402.77 PASS AC=2;AF=1.00;AN=2;DP=130;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.87;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,130:130:99:4431,390,0 chr2 73902768 . G A 2882.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.34;SOR=1.227 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2911,285,0 chr2 73902897 . C A 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.80;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 73906848 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 73908253 . G A 4673.77 PASS AC=2;AF=1.00;AN=2;DP=137;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.12;SOR=1.964 GT:AD:DP:GQ:PL 1/1:0,137:137:99:4702,410,0 chr2 73908605 . G A 685.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.20;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,18:18:54:714,54,0 chr2 73908670 . T C 1254.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.16;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1283,102,0 chr2 73908771 . A G 2944.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.72;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,90:90:99:2973,270,0 chr2 73913454 . A T 3673.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.20;SOR=4.025 GT:AD:DP:GQ:PL 1/1:0,99:99:99:3702,298,0 chr2 73913662 . T C 8027.77 PASS AC=2;AF=1.00;AN=2;DP=242;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.17;SOR=1.448 GT:AD:DP:GQ:PL 1/1:0,242:242:99:8056,726,0 chr2 73913761 . A C 2721.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.29;SOR=4.468 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2750,211,0 chr2 73914286 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 73916443 . A C 397.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.91;ReadPosRankSum=0.545;SOR=0.622 GT:AD:DP:GQ:PL 0/1:13,12:25:99:426,0,468 chr2 73916863 . T A 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=0.319;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr2 73919742 . G A 229.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.198;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.41;ReadPosRankSum=-1.531;SOR=1.329 GT:AD:DP:GQ:PL 0/1:5,9:14:99:258,0,168 chr2 73920594 . C A 220.28 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.429;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.03;ReadPosRankSum=0.000;SOR=0.399 GT:AD:DP:GQ:PL 0/1:1,10:11:9:248,0,9 chr2 73926778 . C T 1529.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.75;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1558,120,0 chr2 73946529 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 73947018 . A G 634.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.547;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=2.483;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.14;ReadPosRankSum=0.129;SOR=1.721 GT:AD:DP:GQ:PL 0/1:15,20:35:99:663,0,410 chr2 73950953 . T C 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.385;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=0.812;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,250 chr2 73957446 . G A 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.97;ReadPosRankSum=0.566;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:105,0,114 chr2 73958749 . A T 1374.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.810;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=2.276;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.74;ReadPosRankSum=-0.015;SOR=0.917 GT:AD:DP:GQ:PL 0/1:73,55:128:99:1403,0,1886 chr2 73985020 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 74080594 . G A 858.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.477;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=3.374;MLEAC=1;MLEAF=0.500;MQ=59.94;MQRankSum=0.000;QD=11.93;ReadPosRankSum=-0.461;SOR=1.125 GT:AD:DP:GQ:PL 0/1:39,33:72:99:887,0,1060 chr2 74099775 . C T 234.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.132;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.77;ReadPosRankSum=-0.573;SOR=0.399 GT:AD:DP:GQ:PL 0/1:5,9:14:99:263,0,133 chr2 74107335 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 74110588 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 74117757 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 74117763 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 74117766 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 74117775 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 74134963 . A G 895.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.85;SOR=4.892 GT:AD:DP:GQ:PL 1/1:0,23:23:69:924,69,0 chr2 74141451 . C T 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr2 74143324 . T A 43.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:71,6,0 chr2 74145551 . A C 2059.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.69;SOR=1.926 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2088,188,0 chr2 74146215 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 74147757 . G A 805.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:63:834,63,0 chr2 74147775 . C T 356.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.300;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=1.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.99;ReadPosRankSum=-1.225;SOR=0.830 GT:AD:DP:GQ:PL 0/1:7,14:21:99:385,0,149 chr2 74156784 . G A 541.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.86;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:47:570,47,0 chr2 74159442 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 74167339 . G A 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr2 74173405 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.72;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 74178928 . G T 148.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.78;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:177,15,0 chr2 74198911 . G A 1189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.473;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.45;ReadPosRankSum=-0.748;SOR=0.527 GT:AD:DP:GQ:PL 0/1:42,35:77:99:1218,0,1486 chr2 74202065 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 74206734 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 74221528 . T C 1832.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.402;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=5.380;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.55;ReadPosRankSum=-0.885;SOR=1.159 GT:AD:DP:GQ:PL 0/1:77,69:146:99:1861,0,2084 chr2 74222998 . T C 1041.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.343;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=4.781;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.89;ReadPosRankSum=-0.101;SOR=0.262 GT:AD:DP:GQ:PL 0/1:34,41:75:99:1070,0,1095 chr2 74226859 . A G 800.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.817;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=7.209;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.02;ReadPosRankSum=1.196;SOR=1.936 GT:AD:DP:GQ:PL 0/1:24,26:50:99:829,0,635 chr2 74227164 . A G 451.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.605;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=15.657;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.91;ReadPosRankSum=-0.359;SOR=4.174 GT:AD:DP:GQ:PL 0/1:21,14:35:99:480,0,618 chr2 74227995 . G A 394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.139;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.94;ReadPosRankSum=-0.687;SOR=0.352 GT:AD:DP:GQ:PL 0/1:9,13:22:99:423,0,300 chr2 74233558 . C T 2712.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.057;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=5.932;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.28;ReadPosRankSum=-0.161;SOR=0.323 GT:AD:DP:GQ:PL 0/1:64,93:157:99:2741,0,1851 chr2 74233777 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 74235514 . T G 221.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.41;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:250,18,0 chr2 74236439 . C T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 74239467 . G A 1975.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.654;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=2.064;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.00;ReadPosRankSum=-1.032;SOR=0.880 GT:AD:DP:GQ:PL 0/1:77,75:152:99:2004,0,1908 chr2 74240748 . T C 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr2 74247566 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 74250300 . G A 2321.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.865;ClippingRankSum=0.000;DP=186;ExcessHet=3.0103;FS=4.828;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.55;ReadPosRankSum=-0.740;SOR=1.061 GT:AD:DP:GQ:PL 0/1:103,82:185:99:2350,0,2879 chr2 74259423 . T A 173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=3.010;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=-0.264;SOR=1.863 GT:AD:DP:GQ:PL 0/1:10,6:16:99:202,0,366 chr2 74262438 . G A 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.652;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr2 74285673 . G A 308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.75;ReadPosRankSum=0.444;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,9:13:99:337,0,128 chr2 74287540 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 74422794 . C A 516.56 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=0.851;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=19.13;ReadPosRankSum=-1.661;SOR=0.760 GT:AD:DP:GQ:PL 1/1:3,24:27:7:544,7,0 chr2 74492875 . C G 1109.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.54;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1138,87,0 chr2 74498017 . T C 11081.77 PASS AC=2;AF=1.00;AN=2;DP=320;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.85;SOR=1.717 GT:AD:DP:GQ:PL 1/1:0,318:318:99:11110,955,0 chr2 74499487 . T A 664.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.969;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=6.673;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.30;ReadPosRankSum=-1.660;SOR=2.340 GT:AD:DP:GQ:PL 0/1:29,21:50:99:693,0,901 chr2 74562573 . A T 415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.985;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=4.337;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.88;ReadPosRankSum=1.957;SOR=2.694 GT:AD:DP:GQ:PL 0/1:7,12:19:99:444,0,201 chr2 74673368 . G A 904.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.523;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=2.760;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.54;ReadPosRankSum=0.829;SOR=0.257 GT:AD:DP:GQ:PL 0/1:15,27:42:99:933,0,500 chr2 74673611 . G A 3284.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.358;ClippingRankSum=0.000;DP=263;ExcessHet=3.0103;FS=1.509;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.49;ReadPosRankSum=1.178;SOR=0.588 GT:AD:DP:GQ:PL 0/1:131,132:263:99:3313,0,3752 chr2 74674259 . A C 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.464;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.91;ReadPosRankSum=0.053;SOR=0.307 GT:AD:DP:GQ:PL 0/1:9,5:14:99:167,0,322 chr2 74674475 . C T 1254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.317;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=4.045;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.79;ReadPosRankSum=0.880;SOR=1.213 GT:AD:DP:GQ:PL 0/1:42,49:91:99:1283,0,1092 chr2 74675745 . A G 4214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.183;ClippingRankSum=0.000;DP=301;ExcessHet=3.0103;FS=1.930;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.00;ReadPosRankSum=0.364;SOR=0.828 GT:AD:DP:GQ:PL 0/1:152,149:301:99:4243,0,4321 chr2 74676044 . C T 362.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.588;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.09;ReadPosRankSum=0.567;SOR=0.573 GT:AD:DP:GQ:PL 0/1:5,14:19:99:391,0,117 chr2 74754710 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 74761890 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 74780344 . C T 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr2 74866074 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 74866341 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 74866503 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 74874470 . C T 6355.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.889;ClippingRankSum=0.000;DP=533;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=2.051;SOR=0.701 GT:AD:DP:GQ:PL 0/1:288,243:531:99:6384,0,7463 chr2 74878671 . A G 7066.77 PASS AC=2;AF=1.00;AN=2;DP=216;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.72;SOR=1.184 GT:AD:DP:GQ:PL 1/1:0,216:216:99:7095,648,0 chr2 74886445 . G A 4610.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.891;ClippingRankSum=0.000;DP=372;ExcessHet=3.0103;FS=0.784;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.43;ReadPosRankSum=0.633;SOR=0.634 GT:AD:DP:GQ:PL 0/1:194,177:371:99:4639,0,4840 chr2 74886530 . C T 3489.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.065;ClippingRankSum=0.000;DP=264;ExcessHet=3.0103;FS=1.488;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.22;ReadPosRankSum=-0.611;SOR=0.605 GT:AD:DP:GQ:PL 0/1:138,126:264:99:3518,0,3963 chr2 74886662 . C G 4039.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.316;ClippingRankSum=0.000;DP=315;ExcessHet=3.0103;FS=0.853;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.82;ReadPosRankSum=-0.782;SOR=0.759 GT:AD:DP:GQ:PL 0/1:158,157:315:99:4068,0,3848 chr2 74887981 . A G 997.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.447;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=9.284;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.83;ReadPosRankSum=-0.235;SOR=0.243 GT:AD:DP:GQ:PL 0/1:64,49:113:99:1026,0,1789 chr2 74888252 . C T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.180;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr2 74889500 . C T 1500.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.371;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=3.198;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.44;ReadPosRankSum=0.139;SOR=1.031 GT:AD:DP:GQ:PL 0/1:99,60:159:99:1529,0,2685 chr2 74958540 . C G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.68;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 74959210 . A G 1461.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.22;SOR=2.200 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1490,132,0 chr2 74960446 . G A 1650.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.69;SOR=1.007 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1679,147,0 chr2 74960666 . A T 346.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.40;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:375,27,0 chr2 74969604 . A G 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr2 74979286 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 75049163 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 75067639 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 75067759 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 75070071 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 75070077 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 75077260 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 75155265 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 75195408 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.74;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 75198497 . G A 358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.018;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=6.520;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=0.727;SOR=2.998 GT:AD:DP:GQ:PL 0/1:13,11:24:99:387,0,402 chr2 75198602 . A G 957.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.425;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=3.054;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.52;ReadPosRankSum=-0.312;SOR=1.099 GT:AD:DP:GQ:PL 0/1:54,37:91:99:986,0,1519 chr2 75256497 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 75256501 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 75256532 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 75256534 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 75256537 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 75315801 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 75320740 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 75336022 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 75353471 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 75353472 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 75517792 . T C 833.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.443;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.435;SOR=0.653 GT:AD:DP:GQ:PL 0/1:34,33:67:99:862,0,994 chr2 75517955 . T C 2621.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.353;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=6.004;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.08;ReadPosRankSum=0.477;SOR=1.193 GT:AD:DP:GQ:PL 0/1:76,87:163:99:2650,0,2125 chr2 75537809 . C T 183.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:212,21,0 chr2 75540951 . C A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 75646607 . T C 1822.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.23;SOR=6.273 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1851,138,0 chr2 75647264 . G C 1304.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.405;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=5.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.67;ReadPosRankSum=-0.360;SOR=1.236 GT:AD:DP:GQ:PL 0/1:56,47:103:99:1333,0,1684 chr2 75652326 . G C 423.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.206;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=1.752;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.30;ReadPosRankSum=1.147;SOR=0.368 GT:AD:DP:GQ:PL 0/1:10,16:26:99:452,0,291 chr2 75654702 . T C 2353.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.15;SOR=1.745 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2382,213,0 chr2 75654769 . G A 1148.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.166;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=1.551;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.64;ReadPosRankSum=-1.990;SOR=0.881 GT:AD:DP:GQ:PL 0/1:57,51:108:99:1177,0,1563 chr2 75655273 . G A 321.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.871;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=1.657;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.38;ReadPosRankSum=0.212;SOR=1.179 GT:AD:DP:GQ:PL 0/1:14,12:26:99:350,0,387 chr2 75664985 . T C 557.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.297;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.94;ReadPosRankSum=-0.644;SOR=0.544 GT:AD:DP:GQ:PL 0/1:16,19:35:99:586,0,529 chr2 75670050 . C G 435.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.499;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.76;ReadPosRankSum=-0.781;SOR=1.730 GT:AD:DP:GQ:PL 0/1:13,13:26:99:464,0,430 chr2 75679498 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 75679846 . G A 1000.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.310;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=4.333;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.20;ReadPosRankSum=-0.916;SOR=1.218 GT:AD:DP:GQ:PL 0/1:43,39:82:99:1029,0,1141 chr2 75680079 . C T 253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.07;ReadPosRankSum=-1.083;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,8:11:92:282,0,92 chr2 75687909 . C T 1696.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.30;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1725,168,0 chr2 75690763 . G T 272.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.185;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.05;ReadPosRankSum=0.418;SOR=0.892 GT:AD:DP:GQ:PL 0/1:6,10:16:99:301,0,156 chr2 75692166 . T C 494.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.251;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=1.463;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.02;ReadPosRankSum=0.584;SOR=1.270 GT:AD:DP:GQ:PL 0/1:19,19:38:99:523,0,463 chr2 75692168 . T C 1571.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.57;SOR=2.432 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1600,108,0 chr2 75692170 . T C 1571.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.61;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1600,108,0 chr2 75696287 . T C 2023.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.12;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2052,189,0 chr2 75701174 . G T 454.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=1.765 GT:AD:DP:GQ:PL 1/1:0,14:14:42:483,42,0 chr2 75702112 . C A 889.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.68;SOR=6.273 GT:AD:DP:GQ:PL 1/1:0,22:22:66:918,66,0 chr2 75706704 . T A 1988.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.71;SOR=2.507 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2017,177,0 chr2 75711125 . G A 40.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:68,6,0 chr2 75969251 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 75969313 . C T 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr2 75969448 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 75994070 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 76130419 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 76130450 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 76130490 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 76238077 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 76333733 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 76438562 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 76584955 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 76612196 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 76724240 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.64;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 76724265 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.64;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 77024023 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 77111311 . T G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 77243514 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 77243571 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 77350123 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 77364437 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 77364448 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 77725015 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.78;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 77725030 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.78;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 77725035 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.78;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 77727441 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 77727444 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 77792868 . A G 331.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.63;QD=30.60;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:360,24,0 chr2 77792869 . T C 331.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.63;QD=29.61;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:360,24,0 chr2 77792871 . A G 331.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.63;QD=31.75;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:360,24,0 chr2 77792883 . A G 286.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.25;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:315,21,0 chr2 77792886 . C T 286.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.25;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:315,21,0 chr2 77792901 . A G 152.03 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.18;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:12:180,12,0 chr2 77792904 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.41;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 77792910 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 77792922 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 77792925 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 77857878 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 77969950 . G C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 78492855 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.03;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 78817377 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 79025824 . A G 848.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.90;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:877,63,0 chr2 79025902 . G T 1122.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.404;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=0.218;SOR=0.818 GT:AD:DP:GQ:PL 0/1:39,38:77:99:1151,0,1523 chr2 79025903 . T G 1126.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.233;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.63;ReadPosRankSum=0.109;SOR=0.582 GT:AD:DP:GQ:PL 0/1:38,39:77:99:1155,0,1478 chr2 79026024 . A G 3269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.865;ClippingRankSum=0.000;DP=265;ExcessHet=3.0103;FS=1.497;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.34;ReadPosRankSum=-0.328;SOR=0.821 GT:AD:DP:GQ:PL 0/1:142,123:265:99:3298,0,3808 chr2 79026249 . C T 1417.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.214;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.92;ReadPosRankSum=-0.923;SOR=0.719 GT:AD:DP:GQ:PL 0/1:47,48:95:99:1446,0,1436 chr2 79026692 . C G 645.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.070;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=1.294;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.56;ReadPosRankSum=-0.676;SOR=0.498 GT:AD:DP:GQ:PL 0/1:18,21:39:99:674,0,531 chr2 79026939 . C T 1697.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.92;QD=26.51;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1726,129,0 chr2 79026975 . T G 2978.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.39;QD=33.17;SOR=1.525 GT:AD:DP:GQ:PL 1/1:0,82:82:99:3007,246,0 chr2 79027135 . T C 3152.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.84;QD=33.19;SOR=1.872 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3181,285,0 chr2 79027316 . C T 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr2 79028300 . G C 2018.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.54;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2047,192,0 chr2 79028462 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.00;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 79085288 . G A 3088.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.57;SOR=1.346 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3117,275,0 chr2 79086689 . G T 2405.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.65;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2434,228,0 chr2 79086955 . T C 566.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.195;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=5.098;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.82;ReadPosRankSum=2.091;SOR=0.226 GT:AD:DP:GQ:PL 0/1:17,24:41:99:595,0,482 chr2 79086968 . G T 1114.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.85;SOR=2.115 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1143,105,0 chr2 79087154 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 79087750 . C A 1768.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.68;SOR=2.004 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1797,153,0 chr2 79099089 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 79122246 . C G 2854.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2883,234,0 chr2 79123221 . A G 2911.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=1.450 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2940,255,0 chr2 79137248 . C G 437.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.478;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.68;ReadPosRankSum=-0.130;SOR=0.821 GT:AD:DP:GQ:PL 0/1:22,19:41:99:466,0,645 chr2 79137271 . G A 314.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.073;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.328;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.99;ReadPosRankSum=1.912;SOR=0.972 GT:AD:DP:GQ:PL 0/1:21,14:35:99:343,0,636 chr2 79137331 . G A 421.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.173;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.06;ReadPosRankSum=1.198;SOR=0.776 GT:AD:DP:GQ:PL 0/1:13,17:30:99:450,0,317 chr2 79137853 . G A 217.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.221;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.75;ReadPosRankSum=-0.296;SOR=1.270 GT:AD:DP:GQ:PL 0/1:5,8:13:99:246,0,136 chr2 79158504 . T C 543.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.686;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=32.740;MLEAC=1;MLEAF=0.500;MQ=59.28;MQRankSum=-7.985;QD=2.96;ReadPosRankSum=-5.059;SOR=2.643 GT:AD:DP:GQ:PL 0/1:158,26:184:99:572,0,8903 chr2 79158505 . G A 543.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.554;ClippingRankSum=0.000;DP=181;ExcessHet=3.0103;FS=34.803;MLEAC=1;MLEAF=0.500;MQ=59.27;MQRankSum=-8.289;QD=3.00;ReadPosRankSum=-4.449;SOR=2.905 GT:AD:DP:GQ:PL 0/1:157,24:181:99:572,0,8903 chr2 79158632 . A C 2600.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.424;ClippingRankSum=0.000;DP=213;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.68;MQRankSum=-6.543;QD=12.21;ReadPosRankSum=1.945;SOR=0.709 GT:AD:DP:GQ:PL 0/1:105,108:213:99:2629,0,2975 chr2 79158660 . T C 3019.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.814;ClippingRankSum=0.000;DP=188;ExcessHet=3.0103;FS=6.235;MLEAC=1;MLEAF=0.500;MQ=57.84;MQRankSum=-6.947;QD=16.06;ReadPosRankSum=0.397;SOR=1.117 GT:AD:DP:GQ:PL 0/1:107,81:188:99:3048,0,4778 chr2 79158661 . G A 3019.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.326;ClippingRankSum=0.000;DP=187;ExcessHet=3.0103;FS=7.323;MLEAC=1;MLEAF=0.500;MQ=57.83;MQRankSum=-6.993;QD=16.15;ReadPosRankSum=0.343;SOR=1.159 GT:AD:DP:GQ:PL 0/1:107,80:187:99:3048,0,4778 chr2 79158697 . T G 1068.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.504;ClippingRankSum=0.000;DP=148;ExcessHet=3.0103;FS=24.509;MLEAC=1;MLEAF=0.500;MQ=58.04;MQRankSum=-7.144;QD=7.22;ReadPosRankSum=-3.749;SOR=2.068 GT:AD:DP:GQ:PL 0/1:106,42:148:99:1097,0,2930 chr2 79158787 . G A 1345.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.647;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=3.991;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.63;ReadPosRankSum=-0.695;SOR=0.719 GT:AD:DP:GQ:PL 0/1:39,53:92:99:1374,0,930 chr2 79158932 . G A 407.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.807;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=1.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.10;ReadPosRankSum=0.030;SOR=1.179 GT:AD:DP:GQ:PL 0/1:13,14:27:99:436,0,311 chr2 79195839 . C G 2189.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.72;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2218,236,0 chr2 79199729 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 79351670 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 79351676 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 79391100 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 79391105 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 79504277 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 79504438 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 79523417 . C T 287.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.005;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=2.011;SOR=1.460 GT:AD:DP:GQ:PL 0/1:11,9:20:99:316,0,387 chr2 79523465 . G T 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-0.366;SOR=1.981 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr2 79594167 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 79594168 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 79594178 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 79653403 . A C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 79653417 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 79682135 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 79853030 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 79870153 . T C 274.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.949;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=0.859;SOR=0.602 GT:AD:DP:GQ:PL 0/1:10,9:19:99:303,0,361 chr2 79873899 . G A 555.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.665;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=2.050;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.23;ReadPosRankSum=1.185;SOR=0.257 GT:AD:DP:GQ:PL 0/1:6,19:25:99:584,0,176 chr2 79873914 . A G 772.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.603;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=4.047;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.42;ReadPosRankSum=1.994;SOR=0.223 GT:AD:DP:GQ:PL 0/1:9,24:33:99:801,0,272 chr2 79874195 . T G 1856.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.163;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.83;ReadPosRankSum=-0.132;SOR=0.738 GT:AD:DP:GQ:PL 0/1:90,67:157:99:1885,0,2559 chr2 79874385 . T C 788.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.000;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=1.056;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=1.700;SOR=0.914 GT:AD:DP:GQ:PL 0/1:33,31:64:99:817,0,969 chr2 79943109 . C A 56.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=14.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:84,12,0 chr2 80053217 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 80053225 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 80059855 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 80545847 . G A 2304.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.694;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=2.020;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.68;ReadPosRankSum=1.007;SOR=0.865 GT:AD:DP:GQ:PL 0/1:71,86:157:99:2333,0,1902 chr2 80561709 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 80573917 . T C 91.77 PASS AC=1;AF=0.500;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;QD=27.66;SOR=2.303 GT:AD:DP:GQ:PL 0/1:0,2:2:30:120,0,30 chr2 80573927 . G C 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.94;ReadPosRankSum=0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:120,0,30 chr2 80574399 . T C 2019.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.826;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=2.095;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.97;ReadPosRankSum=1.045;SOR=0.445 GT:AD:DP:GQ:PL 0/1:52,67:119:99:2048,0,1573 chr2 80581902 . C G 300.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.939;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=4.638;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.40;ReadPosRankSum=0.350;SOR=0.061 GT:AD:DP:GQ:PL 0/1:21,11:32:99:329,0,781 chr2 80589638 . C G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.78;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 80604356 . G A 906.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.062;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.283;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.14;ReadPosRankSum=1.401;SOR=1.085 GT:AD:DP:GQ:PL 0/1:20,30:50:99:935,0,583 chr2 80604466 . G C 355.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.27;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:384,30,0 chr2 80758077 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 80884720 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 80947584 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 81194578 . C T 35.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.732;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.97;ReadPosRankSum=0.431;SOR=0.593 GT:AD:DP:GQ:PL 0/1:6,3:9:64:64,0,224 chr2 81195011 . G T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 81195558 . C G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.450;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.85;ReadPosRankSum=-0.674;SOR=0.039 GT:AD:DP:GQ:PL 0/1:4,4:8:75:75,0,143 chr2 81196153 . T C 420.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.138;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=5.076;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.13;ReadPosRankSum=-0.088;SOR=0.718 GT:AD:DP:GQ:PL 0/1:5,17:22:99:449,0,144 chr2 81196628 . T C 603.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.125;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=0.999;MLEAC=1;MLEAF=0.500;MQ=59.92;MQRankSum=-1.114;QD=10.41;ReadPosRankSum=-1.688;SOR=0.873 GT:AD:DP:GQ:PL 0/1:33,25:58:99:632,0,891 chr2 81197034 . G T 682.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.214;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=2.743;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.88;ReadPosRankSum=1.424;SOR=1.358 GT:AD:DP:GQ:PL 0/1:18,25:43:99:711,0,486 chr2 81198313 . C A 160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=7.782;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.86;ReadPosRankSum=1.180;SOR=1.044 GT:AD:DP:GQ:PL 0/1:3,6:9:98:189,0,98 chr2 81200402 . C T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.566;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr2 81200619 . A G 465.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.026;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.06;ReadPosRankSum=-0.057;SOR=0.741 GT:AD:DP:GQ:PL 0/1:11,18:29:99:494,0,270 chr2 81200951 . C T 274.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.728;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=3.524;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.45;ReadPosRankSum=-1.268;SOR=0.529 GT:AD:DP:GQ:PL 0/1:11,13:24:99:303,0,274 chr2 81342643 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.75;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:72,0,34 chr2 81347111 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 81347121 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 81384797 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 81384843 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 81802367 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 82160046 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 82946641 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 82946764 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 83056474 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 83347563 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.01;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 83347564 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.01;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 83347628 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.01;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 83347630 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.01;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 83347634 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.01;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 83347673 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.01;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 83347679 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.01;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 83592877 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 83745555 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 83745570 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 83852066 . G T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 83885222 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 84127256 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 84127258 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 84270260 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 84277825 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 84291314 . T C 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.29;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr2 84295120 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 84378720 . C A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 84423583 . A G 1667.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1696,159,0 chr2 84433116 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 84449039 . C A 1142.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.89;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1171,111,0 chr2 84458765 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 84469290 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 84528925 . G A 2111.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.06;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2140,203,0 chr2 84529217 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 84544356 . G A 1921.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.50;SOR=0.933 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1950,189,0 chr2 84544443 . C T 1757.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.79;SOR=1.421 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1786,176,0 chr2 84547769 . G A 410.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.22;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:439,33,0 chr2 84548549 . A T 759.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.18;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,19:19:57:788,57,0 chr2 84551979 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 84573481 . C A 1340.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.53;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1369,141,0 chr2 84579429 . G A 293.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.94;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:322,24,0 chr2 84579818 . C G 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.61;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 84595591 . C T 1038.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.32;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1067,84,0 chr2 84604141 . T G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 84604643 . G A 418.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.61;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:447,33,0 chr2 84606760 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 84606939 . T C 2027.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.24;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2056,183,0 chr2 84607113 . T C 1678.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.58;SOR=2.925 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1707,149,0 chr2 84670237 . T A 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.68;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 84670393 . A G 1282.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.15;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1311,132,0 chr2 84672020 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 84672236 . G A 2605.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.29;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2634,228,0 chr2 84672637 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 84681687 . C T 94.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0 chr2 84699407 . A G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 84740546 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 84881185 . T C 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.489;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=-0.992;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,168 chr2 84906092 . G A 1697.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.888;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.58;ReadPosRankSum=-0.738;SOR=0.742 GT:AD:DP:GQ:PL 0/1:69,66:135:99:1726,0,1700 chr2 84906196 . C T 1254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.541;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=1.524;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.20;ReadPosRankSum=1.231;SOR=0.858 GT:AD:DP:GQ:PL 0/1:51,61:112:99:1283,0,1239 chr2 84915811 . G A 82.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.180;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=8.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.35;ReadPosRankSum=1.579;SOR=3.229 GT:AD:DP:GQ:PL 0/1:4,4:8:99:111,0,109 chr2 84916282 . A T 277.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.754;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=8.820;MLEAC=1;MLEAF=0.500;MQ=55.91;MQRankSum=1.008;QD=16.34;ReadPosRankSum=-0.473;SOR=0.982 GT:AD:DP:GQ:PL 0/1:6,11:17:99:306,0,165 chr2 84923208 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 84923212 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 85052920 . G C 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-0.508;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr2 85098330 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 85104302 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 85113444 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 85118875 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 85124027 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 85124074 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 85126766 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 85235650 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 85274261 . C A 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr2 85274267 . G A 87.28 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.43;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:9:115,9,0 chr2 85274286 . C T 104.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:132,9,0 chr2 85305082 . C G 895.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.322;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=1.014;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.761;SOR=0.887 GT:AD:DP:GQ:PL 0/1:39,33:72:99:924,0,1106 chr2 85313643 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.000;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,167 chr2 85313657 . T G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.000;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,167 chr2 85315563 . G C 2331.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.888;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=24.464;MLEAC=1;MLEAF=0.500;MQ=59.98;MQRankSum=1.182;QD=15.65;ReadPosRankSum=1.739;SOR=0.120 GT:AD:DP:GQ:PL 0/1:63,86:149:99:2360,0,1673 chr2 85315595 . G A 2232.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.097;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=29.506;MLEAC=1;MLEAF=0.500;MQ=59.98;MQRankSum=1.176;QD=15.84;ReadPosRankSum=3.492;SOR=0.435 GT:AD:DP:GQ:PL 0/1:60,81:141:99:2261,0,1597 chr2 85315941 . T C 375.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.365;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=4.123;MLEAC=1;MLEAF=0.500;MQ=55.30;MQRankSum=-2.385;QD=17.89;ReadPosRankSum=-0.285;SOR=0.744 GT:AD:DP:GQ:PL 0/1:9,12:21:99:404,0,279 chr2 85316099 . C T 994.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.227;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=7.040;MLEAC=1;MLEAF=0.500;MQ=59.44;MQRankSum=-2.118;QD=11.30;ReadPosRankSum=0.138;SOR=0.444 GT:AD:DP:GQ:PL 0/1:46,42:88:99:1023,0,1181 chr2 85322745 . A G 1769.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.205;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.811;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.58;ReadPosRankSum=0.218;SOR=0.578 GT:AD:DP:GQ:PL 0/1:39,47:86:99:1798,0,2125 chr2 85322751 . A G 1804.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.353;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.99;ReadPosRankSum=-0.520;SOR=0.755 GT:AD:DP:GQ:PL 0/1:40,46:86:99:1833,0,2129 chr2 85324656 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 85325063 . C A 1479.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.367;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=3.519;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.33;ReadPosRankSum=0.819;SOR=0.437 GT:AD:DP:GQ:PL 0/1:52,59:111:99:1508,0,1329 chr2 85326661 . C T 4036.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.946;ClippingRankSum=0.000;DP=308;ExcessHet=3.0103;FS=4.491;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=1.162;SOR=0.489 GT:AD:DP:GQ:PL 0/1:162,146:308:99:4065,0,4891 chr2 85326957 . G A 6533.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.513;ClippingRankSum=0.000;DP=465;ExcessHet=3.0103;FS=0.524;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.05;ReadPosRankSum=0.146;SOR=0.769 GT:AD:DP:GQ:PL 0/1:221,244:465:99:6562,0,6066 chr2 85328139 . T G 438.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.441;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=3.802;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.19;ReadPosRankSum=-0.804;SOR=0.110 GT:AD:DP:GQ:PL 0/1:21,15:36:99:467,0,757 chr2 85328154 . G A 339.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.58;ReadPosRankSum=0.194;SOR=0.404 GT:AD:DP:GQ:PL 0/1:16,11:27:99:368,0,586 chr2 85341581 . A G 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.200;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.802;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.86;ReadPosRankSum=1.221;SOR=0.078 GT:AD:DP:GQ:PL 0/1:7,2:9:63:63,0,397 chr2 85341584 . A G 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.100;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.35;ReadPosRankSum=0.921;SOR=0.105 GT:AD:DP:GQ:PL 0/1:6,2:8:63:63,0,397 chr2 85341590 . T C 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.981;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.82;ReadPosRankSum=0.366;SOR=0.148 GT:AD:DP:GQ:PL 0/1:5,2:7:69:69,0,278 chr2 85341593 . T C 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.981;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.82;ReadPosRankSum=0.000;SOR=0.148 GT:AD:DP:GQ:PL 0/1:5,2:7:69:69,0,278 chr2 85341597 . T A 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.981;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.82;ReadPosRankSum=-0.431;SOR=0.148 GT:AD:DP:GQ:PL 0/1:5,2:7:69:69,0,278 chr2 85341687 . G A 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=0.566;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,78 chr2 85343029 . A G 55.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.751;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.96;MQRankSum=-3.445;QD=3.98;ReadPosRankSum=-1.470;SOR=0.223 GT:AD:DP:GQ:PL 0/1:12,2:14:84:84,0,966 chr2 85343034 . C T 165.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.32;MQRankSum=-2.527;QD=9.75;ReadPosRankSum=-2.152;SOR=0.465 GT:AD:DP:GQ:PL 0/1:13,4:17:99:194,0,1019 chr2 85343036 . T G 165.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.71;MQRankSum=-2.290;QD=7.53;ReadPosRankSum=-2.021;SOR=0.569 GT:AD:DP:GQ:PL 0/1:16,6:22:99:194,0,1019 chr2 85343063 . G A 202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.636;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.14;MQRankSum=-2.488;QD=6.14;ReadPosRankSum=-0.512;SOR=0.418 GT:AD:DP:GQ:PL 0/1:25,8:33:99:231,0,929 chr2 85343819 . G C 549.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=2.319;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.33;ReadPosRankSum=-0.071;SOR=1.483 GT:AD:DP:GQ:PL 0/1:14,16:30:99:578,0,494 chr2 85344587 . A G 871.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.006;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=1.186;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.78;ReadPosRankSum=2.236;SOR=0.933 GT:AD:DP:GQ:PL 0/1:29,30:59:99:900,0,932 chr2 85345910 . G A 3958.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.800;ClippingRankSum=0.000;DP=354;ExcessHet=3.0103;FS=0.810;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.18;ReadPosRankSum=-0.814;SOR=0.746 GT:AD:DP:GQ:PL 0/1:193,161:354:99:3987,0,5388 chr2 85345926 . G A 4547.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.391;ClippingRankSum=0.000;DP=366;ExcessHet=3.0103;FS=2.225;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.43;ReadPosRankSum=-1.189;SOR=0.572 GT:AD:DP:GQ:PL 0/1:198,168:366:99:4576,0,5507 chr2 85346280 . C A 422.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.608;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=28.18;ReadPosRankSum=1.535;SOR=1.739 GT:AD:DP:GQ:PL 0/1:2,13:15:38:451,0,38 chr2 85381831 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 85394936 . T C 2493.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.346;ClippingRankSum=0.000;DP=229;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.89;ReadPosRankSum=-0.277;SOR=0.724 GT:AD:DP:GQ:PL 0/1:133,96:229:99:2522,0,3638 chr2 85398316 . T G 176.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.78;ReadPosRankSum=-0.550;SOR=0.086 GT:AD:DP:GQ:PL 0/1:9,6:15:99:205,0,331 chr2 85399458 . A T 1438.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.865;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=2.068;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.47;ReadPosRankSum=0.005;SOR=1.437 GT:AD:DP:GQ:PL 0/1:50,43:93:99:1467,0,1705 chr2 85401050 . C T 1299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.013;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=1.664;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.68;ReadPosRankSum=0.655;SOR=0.507 GT:AD:DP:GQ:PL 0/1:47,48:95:99:1328,0,1292 chr2 85427958 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 85435527 . A G 2921.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.214;ClippingRankSum=0.000;DP=201;ExcessHet=3.0103;FS=1.214;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.54;ReadPosRankSum=-0.009;SOR=0.581 GT:AD:DP:GQ:PL 0/1:98,103:201:99:2950,0,2949 chr2 85449193 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 85530892 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 85530967 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.24;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 85539422 . C T 2871.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.343;ClippingRankSum=0.000;DP=226;ExcessHet=3.0103;FS=0.527;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.71;ReadPosRankSum=1.580;SOR=0.651 GT:AD:DP:GQ:PL 0/1:118,108:226:99:2900,0,3412 chr2 85542123 . G A 4902.77 PASS AC=2;AF=1.00;AN=2;DP=150;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.13;SOR=0.930 GT:AD:DP:GQ:PL 1/1:0,148:148:99:4931,444,0 chr2 85542588 . C G 1131.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.447;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=3.911;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.30;ReadPosRankSum=-0.425;SOR=1.109 GT:AD:DP:GQ:PL 0/1:47,45:92:99:1160,0,1342 chr2 85542852 . A G 731.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.621;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=1.415;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.26;ReadPosRankSum=1.836;SOR=1.088 GT:AD:DP:GQ:PL 0/1:11,27:38:99:760,0,337 chr2 85550147 . G A 1436.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.041;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=2.160;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.52;ReadPosRankSum=-1.803;SOR=1.057 GT:AD:DP:GQ:PL 0/1:36,46:82:99:1465,0,951 chr2 85553008 . G A 3185.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.893;ClippingRankSum=0.000;DP=288;ExcessHet=3.0103;FS=1.409;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.18;ReadPosRankSum=-0.662;SOR=0.612 GT:AD:DP:GQ:PL 0/1:148,137:285:99:3214,0,4043 chr2 85553413 . C T 2479.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.043;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=5.781;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.31;ReadPosRankSum=0.009;SOR=1.154 GT:AD:DP:GQ:PL 0/1:72,90:162:99:2508,0,2005 chr2 85556005 . T G 415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.985;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=4.337;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.88;ReadPosRankSum=1.482;SOR=2.694 GT:AD:DP:GQ:PL 0/1:7,12:19:99:444,0,199 chr2 85556024 . T C 370.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.109;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.36;ReadPosRankSum=-0.530;SOR=0.368 GT:AD:DP:GQ:PL 0/1:18,12:30:99:399,0,716 chr2 85561017 . C T 1221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.091;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.826;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.00;ReadPosRankSum=-0.305;SOR=0.826 GT:AD:DP:GQ:PL 0/1:48,46:94:99:1250,0,1206 chr2 85561052 . T A 850.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.367;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.29;ReadPosRankSum=0.476;SOR=0.776 GT:AD:DP:GQ:PL 0/1:31,33:64:99:879,0,850 chr2 85561147 . C A 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.549;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.98;ReadPosRankSum=0.889;SOR=1.085 GT:AD:DP:GQ:PL 0/1:5,7:12:99:244,0,173 chr2 85561615 . C A 448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.477;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=1.351;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.68;ReadPosRankSum=0.283;SOR=1.127 GT:AD:DP:GQ:PL 0/1:26,16:42:99:477,0,687 chr2 85577417 . A G 2653.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.92;SOR=2.365 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2682,228,0 chr2 85578945 . T C 2698.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.520;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=3.490;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=-1.755;SOR=0.465 GT:AD:DP:GQ:PL 0/1:106,100:206:99:2727,0,2999 chr2 85579143 . C T 1868.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.438;ClippingRankSum=0.000;DP=177;ExcessHet=3.0103;FS=1.316;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.56;ReadPosRankSum=-1.284;SOR=0.544 GT:AD:DP:GQ:PL 0/1:105,72:177:99:1897,0,2941 chr2 85579959 . T A 502.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.536;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.43;ReadPosRankSum=0.188;SOR=1.005 GT:AD:DP:GQ:PL 0/1:22,22:44:99:531,0,590 chr2 85581450 . T C 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.799;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.56;ReadPosRankSum=-0.817;SOR=0.941 GT:AD:DP:GQ:PL 0/1:8,4:12:99:131,0,264 chr2 85581614 . A G 1228.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.500;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=2.608;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.41;ReadPosRankSum=0.861;SOR=0.827 GT:AD:DP:GQ:PL 0/1:46,53:99:99:1257,0,1240 chr2 85581748 . C T 693.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.421;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=0.353;SOR=0.836 GT:AD:DP:GQ:PL 0/1:27,26:53:99:722,0,730 chr2 85581859 . T C 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.40;ReadPosRankSum=-0.842;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:143,0,104 chr2 85602171 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 85609623 . G A 1162.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.837;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=4.955;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.75;ReadPosRankSum=-1.565;SOR=2.059 GT:AD:DP:GQ:PL 0/1:28,34:62:99:1191,0,866 chr2 85663648 . T G 5179.77 PASS AC=2;AF=1.00;AN=2;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.85;SOR=1.362 GT:AD:DP:GQ:PL 1/1:0,144:144:99:5208,432,0 chr2 85667185 . G T 4893.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.386;ClippingRankSum=0.000;DP=341;ExcessHet=3.0103;FS=0.402;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=0.310;SOR=0.648 GT:AD:DP:GQ:PL 0/1:143,198:341:99:4922,0,3498 chr2 85668215 . T G 1264.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.149;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.06;ReadPosRankSum=1.259;SOR=0.822 GT:AD:DP:GQ:PL 0/1:40,44:84:99:1293,0,1109 chr2 85689161 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 85694230 . G T 3694.77 PASS AC=2;AF=1.00;AN=2;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.29;SOR=1.856 GT:AD:DP:GQ:PL 1/1:0,111:111:99:3723,332,0 chr2 85694266 . G C 4804.77 PASS AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.03;SOR=1.414 GT:AD:DP:GQ:PL 1/1:0,150:150:99:4833,450,0 chr2 85694638 . A G 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.20;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr2 85694869 . T C 3776.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.28;SOR=1.843 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3805,351,0 chr2 85695737 . G T 1047.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.45;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,28:28:83:1076,83,0 chr2 85697261 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 85697606 . C T 15183.77 PASS AC=2;AF=1.00;AN=2;DP=459;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.37;SOR=1.102 GT:AD:DP:GQ:PL 1/1:0,455:455:99:15212,1365,0 chr2 85697776 . T A 8973.77 PASS AC=2;AF=1.00;AN=2;DP=254;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.93;SOR=2.265 GT:AD:DP:GQ:PL 1/1:0,254:254:99:9002,762,0 chr2 85697866 . C T 3122.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.87;SOR=2.135 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3151,284,0 chr2 85697961 . G A 737.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.60;SOR=3.716 GT:AD:DP:GQ:PL 1/1:0,20:20:60:766,60,0 chr2 85698263 . T C 932.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.94;SOR=6.358 GT:AD:DP:GQ:PL 1/1:0,23:23:69:961,69,0 chr2 85698406 . A G 4630.77 PASS AC=2;AF=1.00;AN=2;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.84;SOR=1.448 GT:AD:DP:GQ:PL 1/1:0,141:141:99:4659,426,0 chr2 85698544 . G A 5701.77 PASS AC=2;AF=1.00;AN=2;DP=182;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.33;SOR=1.166 GT:AD:DP:GQ:PL 1/1:0,182:182:99:5730,545,0 chr2 85698557 . T G 5150.77 PASS AC=2;AF=1.00;AN=2;DP=157;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.81;SOR=1.354 GT:AD:DP:GQ:PL 1/1:0,157:157:99:5179,471,0 chr2 85698633 . C G 3298.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.01;SOR=1.469 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3327,291,0 chr2 85698725 . C G 1824.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.79;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1853,162,0 chr2 85699019 . T G 460.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.76;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:489,36,0 chr2 85699067 . A C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.00;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 85699095 . G C 92.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:120,9,0 chr2 85699115 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 85700432 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 85700443 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 85700444 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 85700454 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 85700455 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 85706404 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 85754638 . T C 2602.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.25;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2631,228,0 chr2 85758989 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 85763724 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 85763772 . T C 172.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.81;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:201,18,0 chr2 85765389 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 85767484 . G C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.11;ReadPosRankSum=0.108;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,4:7:68:78,0,68 chr2 85785853 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 85796564 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 85847656 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 85873484 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 85880717 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 85880864 . T C 749.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.99;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,25:25:75:778,75,0 chr2 85885750 . C T 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr2 85889045 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 85889046 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 85893545 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 85929296 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 85933294 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 85950935 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 86065533 . C T 3029.77 PASS AC=2;AF=1.00;AN=2;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.82;SOR=1.504 GT:AD:DP:GQ:PL 1/1:0,87:87:99:3058,261,0 chr2 86074980 . A G 855.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.11;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,22:22:66:884,66,0 chr2 86078000 . T C 2586.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.74;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2615,236,0 chr2 86082987 . C T 804.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.879;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.66;ReadPosRankSum=1.246;SOR=0.592 GT:AD:DP:GQ:PL 0/1:40,29:69:99:833,0,1156 chr2 86088618 . C T 603.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.844;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=2.851;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.72;ReadPosRankSum=0.651;SOR=0.307 GT:AD:DP:GQ:PL 0/1:20,24:44:99:632,0,601 chr2 86089914 . G C 922.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.064;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=5.016;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.14;ReadPosRankSum=0.741;SOR=1.056 GT:AD:DP:GQ:PL 0/1:62,39:101:99:951,0,1573 chr2 86105533 . T G 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.473;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=-0.023;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,227 chr2 86105686 . G A 2254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.893;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=9.504;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.27;ReadPosRankSum=-0.495;SOR=1.461 GT:AD:DP:GQ:PL 0/1:81,77:158:99:2283,0,2227 chr2 86107076 . G A 251.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.570;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.46;ReadPosRankSum=-0.391;SOR=0.641 GT:AD:DP:GQ:PL 0/1:26,13:39:99:280,0,633 chr2 86108085 . T C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-0.189;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr2 86110807 . T C 402.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.380;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.78;ReadPosRankSum=0.663;SOR=1.127 GT:AD:DP:GQ:PL 0/1:10,14:24:99:431,0,277 chr2 86111136 . C T 622.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.326;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.39;ReadPosRankSum=-0.230;SOR=0.811 GT:AD:DP:GQ:PL 0/1:18,20:38:99:651,0,590 chr2 86111457 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 86116353 . C A 211.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.430;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=4.224;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.47;ReadPosRankSum=0.239;SOR=0.170 GT:AD:DP:GQ:PL 0/1:15,10:25:99:240,0,471 chr2 86116371 . G A 322.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.567;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=1.564;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.76;ReadPosRankSum=-0.403;SOR=0.412 GT:AD:DP:GQ:PL 0/1:17,13:30:99:351,0,518 chr2 86116972 . G T 347.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.071;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.49;ReadPosRankSum=-1.249;SOR=1.483 GT:AD:DP:GQ:PL 0/1:13,11:24:99:376,0,405 chr2 86117244 . T C 643.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.534;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=2.665;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.92;ReadPosRankSum=-0.232;SOR=1.255 GT:AD:DP:GQ:PL 0/1:31,23:54:99:672,0,860 chr2 86119185 . G A 741.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.701;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=6.287;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.16;ReadPosRankSum=0.705;SOR=0.193 GT:AD:DP:GQ:PL 0/1:30,31:61:99:770,0,906 chr2 86124887 . G T 188.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.084;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=2.017;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.94;ReadPosRankSum=1.299;SOR=0.293 GT:AD:DP:GQ:PL 0/1:10,9:19:99:217,0,292 chr2 86125662 . G A 398.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.924;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.298;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.73;ReadPosRankSum=1.807;SOR=0.404 GT:AD:DP:GQ:PL 0/1:27,14:41:99:427,0,800 chr2 86125702 . C T 558.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.685;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.31;ReadPosRankSum=2.428;SOR=0.582 GT:AD:DP:GQ:PL 0/1:40,20:60:99:587,0,1104 chr2 86132282 . G T 973.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.641;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=3.022;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.941;SOR=0.430 GT:AD:DP:GQ:PL 0/1:53,37:90:99:1002,0,1488 chr2 86132508 . C T 1773.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.075;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=0.625;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.15;ReadPosRankSum=0.556;SOR=0.608 GT:AD:DP:GQ:PL 0/1:75,71:146:99:1802,0,2040 chr2 86135081 . C T 823.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.045;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=5.013;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.73;ReadPosRankSum=1.474;SOR=1.737 GT:AD:DP:GQ:PL 0/1:33,27:60:99:852,0,1025 chr2 86135951 . A G 3910.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.231;ClippingRankSum=0.000;DP=304;ExcessHet=3.0103;FS=1.362;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.86;ReadPosRankSum=1.049;SOR=0.778 GT:AD:DP:GQ:PL 0/1:153,151:304:99:3939,0,4036 chr2 86136732 . G C 248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.200;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=3.139;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=1.652;SOR=2.115 GT:AD:DP:GQ:PL 0/1:11,8:19:99:277,0,322 chr2 86158763 . A G 4988.77 PASS AC=2;AF=1.00;AN=2;DP=153;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.61;SOR=1.942 GT:AD:DP:GQ:PL 1/1:0,153:153:99:5017,458,0 chr2 86173701 . G A 369.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.801;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.99;ReadPosRankSum=0.386;SOR=0.551 GT:AD:DP:GQ:PL 0/1:22,15:37:99:398,0,592 chr2 86207446 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 86210428 . T G 333.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.291;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.473;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.69;ReadPosRankSum=-0.100;SOR=1.659 GT:AD:DP:GQ:PL 0/1:9,11:20:99:362,0,248 chr2 86210775 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 86213313 . T C 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 86213595 . T C 1738.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.300;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-0.315;SOR=0.656 GT:AD:DP:GQ:PL 0/1:73,67:140:99:1767,0,1929 chr2 86213840 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=1.036;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 86251857 . T C 167.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.32;ReadPosRankSum=-1.008;SOR=0.255 GT:AD:DP:GQ:PL 0/1:12,6:18:99:196,0,447 chr2 86251912 . A G 435.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.125;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=1.920;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.13;ReadPosRankSum=0.988;SOR=1.179 GT:AD:DP:GQ:PL 0/1:28,15:43:99:464,0,893 chr2 86252164 . G T 1527.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.029;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.61;ReadPosRankSum=1.153;SOR=0.674 GT:AD:DP:GQ:PL 0/1:42,50:92:99:1556,0,1259 chr2 86253229 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 86254712 . C T 944.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.277;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=2.435;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.00;ReadPosRankSum=0.596;SOR=0.389 GT:AD:DP:GQ:PL 0/1:27,36:63:99:973,0,690 chr2 86264122 . C T 702.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.498;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=1.229;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.34;ReadPosRankSum=1.693;SOR=0.960 GT:AD:DP:GQ:PL 0/1:24,25:49:99:731,0,617 chr2 86282144 . G A 1048.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.340;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=1.793;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.19;ReadPosRankSum=-1.916;SOR=0.495 GT:AD:DP:GQ:PL 0/1:41,45:86:99:1077,0,980 chr2 86282265 . T G 1142.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.920;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=3.258;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.65;ReadPosRankSum=0.349;SOR=0.404 GT:AD:DP:GQ:PL 0/1:33,45:78:99:1171,0,856 chr2 86303891 . G C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 86314990 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 86337928 . G C 676.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.332;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=1.798;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.51;ReadPosRankSum=0.868;SOR=1.349 GT:AD:DP:GQ:PL 0/1:11,22:33:99:705,0,314 chr2 86456519 . A G 1438.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.36;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1467,145,0 chr2 86463417 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 86463423 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.90;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:90,6,0 chr2 86464127 . G A 3065.77 PASS AC=2;AF=1.00;AN=2;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.35;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,101:101:99:3094,303,0 chr2 86478442 . T C 551.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.079;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.14;ReadPosRankSum=2.390;SOR=0.520 GT:AD:DP:GQ:PL 0/1:24,18:42:99:580,0,694 chr2 86480381 . T C 5109.77 PASS AC=2;AF=1.00;AN=2;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.34;SOR=1.369 GT:AD:DP:GQ:PL 1/1:0,158:158:99:5138,474,0 chr2 86492028 . A C 503.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.132;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.918;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.50;ReadPosRankSum=0.542;SOR=1.195 GT:AD:DP:GQ:PL 0/1:31,17:48:99:532,0,1080 chr2 86499688 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 86510526 . G A 1945.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.080 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1974,180,0 chr2 86529086 . C G 3551.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.75;SOR=3.103 GT:AD:DP:GQ:PL 1/1:0,99:99:99:3580,297,0 chr2 86529157 . G A 2703.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.008;ClippingRankSum=0.000;DP=200;ExcessHet=3.0103;FS=0.562;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=0.484;SOR=0.755 GT:AD:DP:GQ:PL 0/1:99,100:199:99:2732,0,2722 chr2 86537956 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 86537977 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 86612030 . T G 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-0.508;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr2 86622899 . T C 2218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.473;ClippingRankSum=0.000;DP=177;ExcessHet=3.0103;FS=0.565;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.68;ReadPosRankSum=0.988;SOR=0.637 GT:AD:DP:GQ:PL 0/1:94,81:175:99:2247,0,2458 chr2 86623044 . G A 473.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.549;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.80;ReadPosRankSum=-0.038;SOR=1.030 GT:AD:DP:GQ:PL 0/1:20,17:37:99:502,0,656 chr2 86661103 . A G 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.40;QD=27.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr2 86716355 . G A 53.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.18;QD=17.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:81,9,0 chr2 86720660 . C T 1825.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.38;QD=33.20;SOR=1.487 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1854,165,0 chr2 86751772 . G T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.11;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 86751970 . G A 3883.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.10;SOR=1.552 GT:AD:DP:GQ:PL 1/1:0,121:121:99:3912,363,0 chr2 86752294 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.23;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 86752370 . A G 93.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0 chr2 86815702 . T C 1817.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.650;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.77;ReadPosRankSum=-0.091;SOR=0.665 GT:AD:DP:GQ:PL 0/1:62,70:132:99:1846,0,1736 chr2 86821579 . T G 2076.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.01;SOR=4.215 GT:AD:DP:GQ:PL 1/1:0,53:53:99:2105,159,0 chr2 86833236 . C A 130.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.748;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.89;ReadPosRankSum=0.880;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:159,0,218 chr2 86844351 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 86846522 . C T 391.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.52;MQRankSum=1.147;QD=30.14;ReadPosRankSum=1.804;SOR=2.833 GT:AD:DP:GQ:PL 0/1:2,11:13:44:420,0,44 chr2 86846620 . A G 1873.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=45.78;QD=32.87;SOR=1.823 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1902,171,0 chr2 86846729 . C T 1244.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.443;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.98;MQRankSum=1.022;QD=13.68;ReadPosRankSum=1.670;SOR=0.733 GT:AD:DP:GQ:PL 0/1:45,46:91:99:1273,0,1120 chr2 86846798 . G A 903.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.082;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.96;MQRankSum=1.027;QD=12.21;ReadPosRankSum=-0.961;SOR=0.813 GT:AD:DP:GQ:PL 0/1:37,37:74:99:932,0,932 chr2 86846927 . A C 272.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.28;QD=34.10;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:301,24,0 chr2 86858475 . T C 743.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.916;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=30.429;MLEAC=1;MLEAF=0.500;MQ=53.40;MQRankSum=-8.563;QD=8.55;ReadPosRankSum=-0.478;SOR=5.000 GT:AD:DP:GQ:PL 0/1:59,28:87:99:772,0,1917 chr2 86858518 . G A 284.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.296;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.30;MQRankSum=-6.457;QD=6.47;ReadPosRankSum=0.637;SOR=0.949 GT:AD:DP:GQ:PL 0/1:32,12:44:99:313,0,1130 chr2 86878321 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.28;MQRankSum=-0.431;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 86930173 . A G 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.187;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.54;MQRankSum=-3.519;QD=3.02;ReadPosRankSum=-1.280;SOR=0.859 GT:AD:DP:GQ:PL 0/1:26,6:32:99:125,0,876 chr2 86930536 . C A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.981;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.85;MQRankSum=-1.068;QD=5.40;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,2:7:66:66,0,403 chr2 86942193 . T G 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.481;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.82;MQRankSum=-0.510;QD=3.45;ReadPosRankSum=0.148;SOR=0.920 GT:AD:DP:GQ:PL 0/1:27,8:35:99:149,0,738 chr2 86942370 . C G 283.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.800;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=7.915;MLEAC=1;MLEAF=0.500;MQ=53.49;MQRankSum=-0.852;QD=12.34;ReadPosRankSum=-2.018;SOR=0.074 GT:AD:DP:GQ:PL 0/1:14,9:23:99:312,0,2236 chr2 87073579 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 87075756 . A G 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.75;MQRankSum=-0.180;QD=4.82;ReadPosRankSum=0.000;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,184 chr2 87075937 . C G 801.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.170;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=3.639;MLEAC=1;MLEAF=0.500;MQ=58.76;MQRankSum=-0.310;QD=13.36;ReadPosRankSum=0.582;SOR=1.306 GT:AD:DP:GQ:PL 0/1:29,31:60:99:830,0,758 chr2 87118573 . A C 377.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.457;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.86;MQRankSum=-1.750;QD=13.49;ReadPosRankSum=0.621;SOR=0.610 GT:AD:DP:GQ:PL 0/1:13,15:28:99:406,0,323 chr2 87121142 . T C 103.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.68;MQRankSum=-0.842;QD=20.76;ReadPosRankSum=-0.253;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:132,0,27 chr2 87128789 . C T 311.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.508;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=1.207;MLEAC=1;MLEAF=0.500;MQ=54.30;MQRankSum=-4.964;QD=6.00;ReadPosRankSum=-0.255;SOR=0.966 GT:AD:DP:GQ:PL 0/1:37,15:52:99:340,0,983 chr2 87128901 . C A 415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.82;MQRankSum=-3.770;QD=10.14;ReadPosRankSum=-0.625;SOR=0.532 GT:AD:DP:GQ:PL 0/1:27,14:41:99:444,0,1150 chr2 87128915 . G A 300.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.124;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.883;MLEAC=1;MLEAF=0.500;MQ=51.22;MQRankSum=-3.997;QD=9.40;ReadPosRankSum=-0.393;SOR=1.105 GT:AD:DP:GQ:PL 0/1:23,9:32:99:329,0,1109 chr2 87128934 . A G 590.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.773;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=4.703;MLEAC=1;MLEAF=0.500;MQ=50.97;MQRankSum=-4.580;QD=20.37;ReadPosRankSum=0.338;SOR=1.994 GT:AD:DP:GQ:PL 0/1:11,18:29:99:619,0,270 chr2 87144123 . A G 1057.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.006;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.38;MQRankSum=0.105;QD=13.22;ReadPosRankSum=0.451;SOR=0.751 GT:AD:DP:GQ:PL 0/1:37,43:80:99:1086,0,895 chr2 87144137 . T C 858.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.557;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.50;MQRankSum=0.545;QD=11.76;ReadPosRankSum=-0.943;SOR=0.735 GT:AD:DP:GQ:PL 0/1:40,33:73:99:887,0,1077 chr2 87144216 . C T 425.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.07;MQRankSum=0.155;QD=15.21;ReadPosRankSum=0.394;SOR=0.569 GT:AD:DP:GQ:PL 0/1:15,13:28:99:454,0,540 chr2 87149821 . G A 1078.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.164;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=2.075;MLEAC=1;MLEAF=0.500;MQ=52.68;MQRankSum=1.086;QD=14.98;ReadPosRankSum=-0.123;SOR=1.034 GT:AD:DP:GQ:PL 0/1:31,41:72:99:1107,0,775 chr2 87181385 . C A 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.071;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.23;MQRankSum=-3.497;QD=4.25;ReadPosRankSum=0.912;SOR=1.179 GT:AD:DP:GQ:PL 0/1:13,6:19:99:109,0,446 chr2 87187207 . T C 378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.904;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=21.112;MLEAC=1;MLEAF=0.500;MQ=52.58;MQRankSum=-7.386;QD=5.12;ReadPosRankSum=0.542;SOR=3.611 GT:AD:DP:GQ:PL 0/1:54,20:74:99:407,0,1442 chr2 87196333 . C G 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.26;MQRankSum=0.000;QD=12.26;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:65,0,33 chr2 87338620 . A C 679.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.521;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=7.656;MLEAC=1;MLEAF=0.500;MQ=52.77;MQRankSum=-6.051;QD=12.36;ReadPosRankSum=-0.384;SOR=1.674 GT:AD:DP:GQ:PL 0/1:29,26:55:99:708,0,864 chr2 87398395 . C A 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.94;MQRankSum=-0.674;QD=23.69;ReadPosRankSum=0.000;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:99:123,0,155 chr2 87398396 . C A 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.150;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.94;MQRankSum=-0.674;QD=23.69;ReadPosRankSum=0.000;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:99:123,0,155 chr2 87398415 . A T 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.94;MQRankSum=-0.674;QD=23.69;ReadPosRankSum=1.150;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:99:123,0,155 chr2 87398426 . C G 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.94;MQRankSum=-0.674;QD=23.69;ReadPosRankSum=1.150;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:99:123,0,155 chr2 87401764 . C G 138.84 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.86;QD=23.14;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:167,18,0 chr2 87401816 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.67;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 87401843 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.67;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 87401854 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.67;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 87405469 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.53;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 87405494 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.53;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 87407950 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 87407977 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 87418947 . A T 130.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.78;MQRankSum=-1.006;QD=18.68;ReadPosRankSum=0.000;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,4:7:99:159,0,135 chr2 87418976 . C G 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.17;MQRankSum=0.180;QD=4.72;ReadPosRankSum=0.319;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,2:8:66:66,0,300 chr2 87418979 . T A 127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.17;MQRankSum=-1.282;QD=15.97;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:156,0,157 chr2 87418982 . A G 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.17;MQRankSum=0.180;QD=4.72;ReadPosRankSum=0.319;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,2:8:66:66,0,300 chr2 87418991 . A T 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.17;MQRankSum=0.180;QD=4.72;ReadPosRankSum=0.319;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,2:8:66:66,0,300 chr2 87441938 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 87441939 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 87442053 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.70;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 87453991 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.84;QD=29.58;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 87454000 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.84;QD=27.59;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 87629507 . G T 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.219;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.89;MQRankSum=-3.511;QD=5.91;ReadPosRankSum=-1.655;SOR=0.180 GT:AD:DP:GQ:PL 0/1:17,7:24:99:170,0,592 chr2 87629583 . C T 553.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.014;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=17.848;MLEAC=1;MLEAF=0.500;MQ=50.43;MQRankSum=-7.993;QD=5.59;ReadPosRankSum=1.085;SOR=3.800 GT:AD:DP:GQ:PL 0/1:70,29:99:99:582,0,2251 chr2 87825693 . C G 305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.843;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.91;MQRankSum=1.196;QD=9.27;ReadPosRankSum=1.205;SOR=0.551 GT:AD:DP:GQ:PL 0/1:21,12:33:99:334,0,515 chr2 87857503 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 87857532 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.70;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 87873001 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.31;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 87961263 . G C 137.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.150;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.88;MQRankSum=-0.157;QD=17.23;ReadPosRankSum=-0.319;SOR=0.330 GT:AD:DP:GQ:PL 0/1:1,7:8:18:166,0,18 chr2 87973279 . C T 1270.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.573;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=2.564;MLEAC=1;MLEAF=0.500;MQ=48.59;MQRankSum=0.234;QD=11.77;ReadPosRankSum=-0.979;SOR=0.990 GT:AD:DP:GQ:PL 0/1:56,52:108:99:1299,0,1386 chr2 87992875 . C G 85.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.589;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.79;MQRankSum=-1.122;QD=9.53;ReadPosRankSum=0.000;SOR=1.022 GT:AD:DP:GQ:PL 0/1:4,5:9:72:114,0,72 chr2 88001938 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 88003496 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 88012405 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 88028689 . G A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.598;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,117 chr2 88059306 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 88068293 . G T 490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.985;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=4.393;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.31;ReadPosRankSum=1.315;SOR=2.712 GT:AD:DP:GQ:PL 0/1:8,14:22:99:519,0,234 chr2 88081198 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 88082217 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 88087846 . G A 1237.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.878;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=7.214;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.45;ReadPosRankSum=-0.036;SOR=0.259 GT:AD:DP:GQ:PL 0/1:44,48:92:99:1266,0,1297 chr2 88087884 . C A 1553.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.424;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=0.660;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=-0.274;SOR=0.623 GT:AD:DP:GQ:PL 0/1:67,64:131:99:1582,0,1927 chr2 88088038 . A C 1987.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.754;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=9.284;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.19;ReadPosRankSum=-0.614;SOR=1.215 GT:AD:DP:GQ:PL 0/1:88,75:163:99:2016,0,2368 chr2 88091330 . G T 556.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.843;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=0.305;SOR=0.892 GT:AD:DP:GQ:PL 0/1:14,17:31:99:585,0,490 chr2 88093735 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr2 88096284 . A G 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.842;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr2 88096305 . G A 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.792;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr2 88096470 . G C 1345.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.217;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=2.557;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.867;SOR=0.982 GT:AD:DP:GQ:PL 0/1:72,51:123:99:1374,0,2107 chr2 88096561 . A C 2204.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.166;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=1.231;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.61;ReadPosRankSum=0.374;SOR=0.843 GT:AD:DP:GQ:PL 0/1:79,83:162:99:2233,0,2224 chr2 88096601 . G A 3431.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.550;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=1.897;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.07;ReadPosRankSum=-0.513;SOR=0.538 GT:AD:DP:GQ:PL 0/1:81,90:171:99:3460,0,3687 chr2 88096604 . C G 3410.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.406;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=2.672;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.30;ReadPosRankSum=-0.270;SOR=0.565 GT:AD:DP:GQ:PL 0/1:81,87:168:99:3439,0,3690 chr2 88096655 . T C 2582.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.627;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.10;ReadPosRankSum=-0.855;SOR=0.703 GT:AD:DP:GQ:PL 0/1:80,91:171:99:2611,0,2271 chr2 88102818 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 88102992 . C A 930.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.871;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=4.865;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.92;ReadPosRankSum=-0.174;SOR=0.247 GT:AD:DP:GQ:PL 0/1:23,32:55:99:959,0,681 chr2 88103041 . G A 1163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.682;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=1.410;SOR=0.633 GT:AD:DP:GQ:PL 0/1:47,45:92:99:1192,0,1213 chr2 88106589 . C T 3025.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.847;ClippingRankSum=0.000;DP=210;ExcessHet=3.0103;FS=0.572;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.48;ReadPosRankSum=-0.675;SOR=0.605 GT:AD:DP:GQ:PL 0/1:99,110:209:99:3054,0,2791 chr2 88106738 . A G 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=0.732;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,179 chr2 88108440 . T C 1935.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.189;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=4.497;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=0.098;SOR=0.977 GT:AD:DP:GQ:PL 0/1:93,74:167:99:1964,0,2620 chr2 88108653 . A G 1435.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.63;SOR=1.828 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1464,132,0 chr2 88110583 . C G 3588.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=5.353 GT:AD:DP:GQ:PL 1/1:0,91:91:99:3617,274,0 chr2 88110649 . A G 1099.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.54;SOR=6.666 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1128,81,0 chr2 88112086 . A T 1371.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.301;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=2.604;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.45;ReadPosRankSum=-0.834;SOR=0.986 GT:AD:DP:GQ:PL 0/1:47,55:102:99:1400,0,1180 chr2 88112274 . C A 1108.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.85;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1137,90,0 chr2 88122893 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 88123239 . G A 299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.356;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=3.590;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.74;ReadPosRankSum=0.507;SOR=2.215 GT:AD:DP:GQ:PL 0/1:7,9:16:99:328,0,210 chr2 88124547 . T C 1923.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.345;ClippingRankSum=0.000;DP=167;ExcessHet=3.0103;FS=2.846;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.52;ReadPosRankSum=1.085;SOR=0.972 GT:AD:DP:GQ:PL 0/1:93,74:167:99:1952,0,2429 chr2 88170344 . G C 129.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:158,15,0 chr2 88173272 . G A 2005.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.88;SOR=1.850 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2034,183,0 chr2 88174851 . A G 10798.77 PASS AC=2;AF=1.00;AN=2;DP=311;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.72;SOR=1.357 GT:AD:DP:GQ:PL 1/1:0,311:311:99:10827,934,0 chr2 88185289 . C A 3452.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.486;ClippingRankSum=0.000;DP=244;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.27;ReadPosRankSum=-1.576;SOR=0.708 GT:AD:DP:GQ:PL 0/1:106,136:242:99:3481,0,2688 chr2 88185873 . G C 2104.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.84;SOR=1.412 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2133,168,0 chr2 88241680 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 88438988 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 88448871 . A T 1689.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.157;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=4.278;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=1.682;SOR=0.402 GT:AD:DP:GQ:PL 0/1:73,63:136:99:1718,0,1882 chr2 88526757 . T C 161.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.96;ReadPosRankSum=-0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:190,0,24 chr2 88537768 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 88571114 . A T 521.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.476;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.74;ReadPosRankSum=1.128;SOR=1.609 GT:AD:DP:GQ:PL 0/1:8,16:24:99:550,0,228 chr2 88575373 . C A 2637.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.313;ClippingRankSum=0.000;DP=189;ExcessHet=3.0103;FS=0.535;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.96;ReadPosRankSum=0.759;SOR=0.620 GT:AD:DP:GQ:PL 0/1:89,100:189:99:2666,0,2342 chr2 88579613 . T C 2423.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.116;ClippingRankSum=0.000;DP=195;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.49;ReadPosRankSum=-0.336;SOR=0.457 GT:AD:DP:GQ:PL 0/1:103,91:194:99:2452,0,2872 chr2 88595605 . T C 1246.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.425;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=0.653;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.17;ReadPosRankSum=-1.167;SOR=0.604 GT:AD:DP:GQ:PL 0/1:84,52:136:99:1275,0,2253 chr2 88595833 . T C 824.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.079;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=3.020;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.71;ReadPosRankSum=-0.691;SOR=0.428 GT:AD:DP:GQ:PL 0/1:42,35:77:99:853,0,1080 chr2 88613755 . G C 649.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.512;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.02;ReadPosRankSum=1.111;SOR=0.693 GT:AD:DP:GQ:PL 0/1:40,32:72:99:678,0,1012 chr2 88626830 . G C 71.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.25;ReadPosRankSum=-0.566;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:100,0,146 chr2 88688921 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 88698360 . C T 465.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.394;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.53;ReadPosRankSum=-1.512;SOR=1.508 GT:AD:DP:GQ:PL 0/1:16,14:30:99:494,0,538 chr2 88699958 . G A 1421.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.314;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=1.411;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.61;ReadPosRankSum=0.193;SOR=0.867 GT:AD:DP:GQ:PL 0/1:75,59:134:99:1450,0,2011 chr2 88734355 . C T 85.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.25;ReadPosRankSum=1.465;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:114,0,105 chr2 88773848 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 88773849 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 88773857 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 88773875 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 88784810 . G C 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.085;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=1.732;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,7:9:57:182,0,57 chr2 88804390 . C T 31.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.97;ReadPosRankSum=0.319;SOR=2.303 GT:AD:DP:GQ:PL 0/1:6,2:8:60:60,0,158 chr2 88805183 . T A 210.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.42;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:239,18,0 chr2 88814622 . G A 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr2 88857435 . C G 3272.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.820;ClippingRankSum=0.000;DP=269;ExcessHet=3.0103;FS=6.573;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.17;ReadPosRankSum=-1.152;SOR=1.053 GT:AD:DP:GQ:PL 0/1:147,122:269:99:3301,0,3668 chr2 88857566 . T C 2239.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.906;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=1.916;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=0.780;SOR=0.552 GT:AD:DP:GQ:PL 0/1:87,84:171:99:2268,0,2462 chr2 88857769 . T A 500.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.545;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.27;ReadPosRankSum=-0.082;SOR=0.865 GT:AD:DP:GQ:PL 0/1:35,19:54:99:529,0,1050 chr2 88861377 . G T 4197.77 PASS AC=2;AF=1.00;AN=2;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.80;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,128:128:99:4226,383,0 chr2 88861557 . C G 5507.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.78;SOR=0.998 GT:AD:DP:GQ:PL 1/1:0,125:125:99:5536,376,0 chr2 88861560 . C T 5419.77 PASS AC=2;AF=1.00;AN=2;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.31;SOR=1.015 GT:AD:DP:GQ:PL 1/1:0,119:119:99:5448,367,0 chr2 88861810 . C G 4834.77 PASS AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.05;SOR=2.049 GT:AD:DP:GQ:PL 1/1:0,142:142:99:4863,427,0 chr2 88886258 . G A 935.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.817;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.253;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.33;ReadPosRankSum=-0.571;SOR=1.085 GT:AD:DP:GQ:PL 0/1:20,34:54:99:964,0,495 chr2 88887125 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 88897241 . G A 730.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.233;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=3.699;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.18;ReadPosRankSum=-1.046;SOR=0.314 GT:AD:DP:GQ:PL 0/1:31,29:60:99:759,0,808 chr2 88897390 . A C 1144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.568;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=0.824;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=0.078;SOR=0.833 GT:AD:DP:GQ:PL 0/1:42,43:85:99:1173,0,1331 chr2 88897674 . C T 802.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.162;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.941;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.70;ReadPosRankSum=0.776;SOR=0.569 GT:AD:DP:GQ:PL 0/1:44,31:75:99:831,0,1374 chr2 88931864 . G A 972.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.902;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.31;ReadPosRankSum=-1.331;SOR=0.756 GT:AD:DP:GQ:PL 0/1:49,37:86:99:1001,0,1345 chr2 88942171 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 88947433 . C T 2592.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.776;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=1.168;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=0.438;SOR=0.816 GT:AD:DP:GQ:PL 0/1:84,100:184:99:2621,0,2309 chr2 88966198 . G C 479.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.483;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=4.449;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.05;ReadPosRankSum=-0.127;SOR=1.422 GT:AD:DP:GQ:PL 0/1:33,20:53:99:508,0,913 chr2 88966242 . C T 976.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.817;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=5.382;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.36;ReadPosRankSum=-1.494;SOR=1.477 GT:AD:DP:GQ:PL 0/1:33,35:68:99:1005,0,1004 chr2 88966502 . A T 6272.77 PASS AC=2;AF=1.00;AN=2;DP=184;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.43;QD=34.09;SOR=0.783 GT:AD:DP:GQ:PL 1/1:0,184:184:99:6301,553,0 chr2 88978279 . C G 48.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.28;MQRankSum=-2.369;QD=6.10;ReadPosRankSum=0.489;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:77:77,0,185 chr2 88978584 . T C 1189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.247;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.965;MLEAC=1;MLEAF=0.500;MQ=54.90;MQRankSum=-1.098;QD=18.03;ReadPosRankSum=-0.602;SOR=0.846 GT:AD:DP:GQ:PL 0/1:23,43:66:99:1218,0,534 chr2 88978970 . A C 1003.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.229;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=0.762;MLEAC=1;MLEAF=0.500;MQ=56.79;MQRankSum=-5.812;QD=10.14;ReadPosRankSum=1.275;SOR=0.859 GT:AD:DP:GQ:PL 0/1:56,43:99:99:1032,0,1465 chr2 88992294 . T C 268.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.386;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.282;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=0.163;SOR=0.223 GT:AD:DP:GQ:PL 0/1:9,11:20:99:297,0,282 chr2 88992663 . A G 2738.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.457;ClippingRankSum=0.000;DP=203;ExcessHet=3.0103;FS=5.845;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=0.522;SOR=1.066 GT:AD:DP:GQ:PL 0/1:107,96:203:99:2767,0,2953 chr2 88992682 . C T 2651.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.902;ClippingRankSum=0.000;DP=195;ExcessHet=3.0103;FS=5.975;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.60;ReadPosRankSum=0.896;SOR=1.075 GT:AD:DP:GQ:PL 0/1:102,93:195:99:2680,0,2889 chr2 88992882 . T C 1010.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.410;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.24;ReadPosRankSum=0.790;SOR=0.661 GT:AD:DP:GQ:PL 0/1:36,35:71:99:1039,0,1108 chr2 88992963 . C T 334.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.60;ReadPosRankSum=0.049;SOR=0.914 GT:AD:DP:GQ:PL 0/1:8,10:18:99:363,0,279 chr2 89009927 . G A 558.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.534;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=3.702;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.46;ReadPosRankSum=0.867;SOR=0.255 GT:AD:DP:GQ:PL 0/1:14,18:32:99:587,0,454 chr2 89010045 . T G 1923.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.505;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=3.306;MLEAC=1;MLEAF=0.500;MQ=54.98;MQRankSum=-9.059;QD=13.55;ReadPosRankSum=-1.266;SOR=1.052 GT:AD:DP:GQ:PL 0/1:76,66:142:99:1952,0,2034 chr2 89010057 . T A 2073.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.636;ClippingRankSum=0.000;DP=148;ExcessHet=3.0103;FS=5.354;MLEAC=1;MLEAF=0.500;MQ=54.95;MQRankSum=-9.453;QD=14.01;ReadPosRankSum=-1.457;SOR=1.179 GT:AD:DP:GQ:PL 0/1:79,69:148:99:2102,0,1871 chr2 89010238 . A G 2938.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.732;ClippingRankSum=0.000;DP=209;ExcessHet=3.0103;FS=6.826;MLEAC=1;MLEAF=0.500;MQ=59.99;MQRankSum=-1.364;QD=14.06;ReadPosRankSum=0.594;SOR=1.150 GT:AD:DP:GQ:PL 0/1:101,108:209:99:2967,0,2811 chr2 89010265 . T G 2607.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=197;ExcessHet=3.0103;FS=5.106;MLEAC=1;MLEAF=0.500;MQ=59.98;MQRankSum=-1.726;QD=13.24;ReadPosRankSum=0.059;SOR=1.049 GT:AD:DP:GQ:PL 0/1:98,99:197:99:2636,0,2729 chr2 89010551 . T A 63.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.726;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.86;MQRankSum=-2.540;QD=4.91;ReadPosRankSum=0.828;SOR=0.124 GT:AD:DP:GQ:PL 0/1:10,3:13:92:92,0,609 chr2 89010552 . C T 63.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.86;MQRankSum=-2.540;QD=4.91;ReadPosRankSum=0.922;SOR=0.124 GT:AD:DP:GQ:PL 0/1:10,3:13:92:92,0,609 chr2 89020059 . C T 123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.559;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.010;MLEAC=1;MLEAF=0.500;MQ=59.89;MQRankSum=-0.431;QD=13.75;ReadPosRankSum=0.120;SOR=0.160 GT:AD:DP:GQ:PL 0/1:3,6:9:98:152,0,98 chr2 89020337 . G A 149.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.809;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.70;MQRankSum=-0.448;QD=11.52;ReadPosRankSum=0.026;SOR=1.022 GT:AD:DP:GQ:PL 0/1:7,6:13:99:178,0,136 chr2 89040479 . G A 2108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.741;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.70;MQRankSum=1.143;QD=15.86;ReadPosRankSum=-0.983;SOR=0.679 GT:AD:DP:GQ:PL 0/1:60,73:133:99:2137,0,1783 chr2 89045930 . G A 592.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.026;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=2.183;MLEAC=1;MLEAF=0.500;MQ=53.94;MQRankSum=-4.663;QD=14.82;ReadPosRankSum=1.085;SOR=1.781 GT:AD:DP:GQ:PL 0/1:20,20:40:99:621,0,677 chr2 89046584 . G A 572.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.794;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=2.679;MLEAC=1;MLEAF=0.500;MQ=41.27;MQRankSum=1.340;QD=22.03;ReadPosRankSum=0.955;SOR=0.249 GT:AD:DP:GQ:PL 0/1:7,19:26:99:601,0,214 chr2 89085291 . A G 840.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.194;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=1.762;MLEAC=1;MLEAF=0.500;MQ=49.62;MQRankSum=-8.321;QD=9.45;ReadPosRankSum=-0.039;SOR=0.497 GT:AD:DP:GQ:PL 0/1:51,38:89:99:869,0,1576 chr2 89099739 . C T 913.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=45.24;QD=26.70;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,25:25:75:942,75,0 chr2 89171138 . C G 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.736;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.61;MQRankSum=0.084;QD=12.85;ReadPosRankSum=-1.280;SOR=0.859 GT:AD:DP:GQ:PL 0/1:7,8:15:99:221,0,213 chr2 89172903 . C T 812.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.715;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.970;MLEAC=1;MLEAF=0.500;MQ=51.52;MQRankSum=-7.709;QD=11.61;ReadPosRankSum=-0.434;SOR=0.513 GT:AD:DP:GQ:PL 0/1:33,37:70:99:841,0,930 chr2 89172935 . T C 840.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.373;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.76;MQRankSum=-6.719;QD=11.52;ReadPosRankSum=0.347;SOR=0.739 GT:AD:DP:GQ:PL 0/1:36,37:73:99:869,0,968 chr2 89213290 . T G 477.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.988;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=6.517;MLEAC=1;MLEAF=0.500;MQ=47.40;MQRankSum=2.646;QD=11.11;ReadPosRankSum=-0.455;SOR=2.331 GT:AD:DP:GQ:PL 0/1:27,16:43:99:506,0,742 chr2 89213519 . A G 2012.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.935;ClippingRankSum=0.000;DP=130;ExcessHet=3.0103;FS=1.413;MLEAC=1;MLEAF=0.500;MQ=57.92;MQRankSum=1.442;QD=15.48;ReadPosRankSum=1.459;SOR=0.536 GT:AD:DP:GQ:PL 0/1:56,74:130:99:2041,0,1531 chr2 89214013 . T A 234.90 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.282;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=46.89;MQRankSum=-0.765;QD=26.10;ReadPosRankSum=-0.282;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,8:9:15:263,0,15 chr2 89222103 . G C 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.832;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=4.041;MLEAC=1;MLEAF=0.500;MQ=45.58;MQRankSum=-0.699;QD=4.90;ReadPosRankSum=-0.166;SOR=1.555 GT:AD:DP:GQ:PL 0/1:24,7:31:99:180,0,760 chr2 89233981 . G A 236.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.02;MQRankSum=-0.489;QD=29.60;ReadPosRankSum=-0.319;SOR=2.833 GT:AD:DP:GQ:PL 0/1:1,7:8:18:265,0,18 chr2 89234206 . T G 2164.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.392;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=3.629;MLEAC=1;MLEAF=0.500;MQ=54.22;MQRankSum=-8.015;QD=18.66;ReadPosRankSum=-0.161;SOR=0.404 GT:AD:DP:GQ:PL 0/1:42,74:116:99:2193,0,1121 chr2 89234329 . C T 3085.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.328;ClippingRankSum=0.000;DP=213;ExcessHet=3.0103;FS=3.089;MLEAC=1;MLEAF=0.500;MQ=56.41;MQRankSum=1.146;QD=14.49;ReadPosRankSum=-0.603;SOR=0.495 GT:AD:DP:GQ:PL 0/1:97,116:213:99:3114,0,2538 chr2 89244532 . C T 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=55.29;MQRankSum=-1.242;QD=12.42;ReadPosRankSum=1.559;SOR=0.105 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr2 89244680 . G C 1545.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.120;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=1.662;MLEAC=1;MLEAF=0.500;MQ=52.27;MQRankSum=-1.459;QD=13.56;ReadPosRankSum=-0.151;SOR=0.516 GT:AD:DP:GQ:PL 0/1:56,58:114:99:1574,0,1621 chr2 89245365 . C T 1868.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.738;ClippingRankSum=0.000;DP=240;ExcessHet=3.0103;FS=0.517;MLEAC=1;MLEAF=0.500;MQ=47.89;MQRankSum=-8.068;QD=7.79;ReadPosRankSum=2.525;SOR=0.771 GT:AD:DP:GQ:PL 0/1:151,89:240:99:1897,0,4085 chr2 89252859 . C T 77.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.17;MQRankSum=-1.036;QD=15.55;ReadPosRankSum=0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:66:106,0,66 chr2 89581083 . C T 322.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.149;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=1.077;MLEAC=1;MLEAF=0.500;MQ=46.89;MQRankSum=-0.407;QD=4.61;ReadPosRankSum=-0.088;SOR=0.509 GT:AD:DP:GQ:PL 0/1:52,18:70:99:351,0,1481 chr2 89585809 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.89;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 89585922 . G A 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr2 89610174 . G T 465.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.256;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=1.303;MLEAC=1;MLEAF=0.500;MQ=48.04;MQRankSum=0.618;QD=9.51;ReadPosRankSum=-0.938;SOR=1.136 GT:AD:DP:GQ:PL 0/1:30,19:49:99:494,0,855 chr2 89610364 . C G 2573.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.039;ClippingRankSum=0.000;DP=193;ExcessHet=3.0103;FS=2.474;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=0.732;SOR=0.733 GT:AD:DP:GQ:PL 0/1:98,95:193:99:2602,0,2560 chr2 89610467 . C T 1849.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.098;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=3.770;MLEAC=1;MLEAF=0.500;MQ=56.54;MQRankSum=0.956;QD=12.09;ReadPosRankSum=0.071;SOR=0.992 GT:AD:DP:GQ:PL 0/1:82,71:153:99:1878,0,2367 chr2 89610726 . T G 2612.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.935;ClippingRankSum=0.000;DP=213;ExcessHet=3.0103;FS=3.841;MLEAC=1;MLEAF=0.500;MQ=59.90;MQRankSum=-1.074;QD=12.27;ReadPosRankSum=-0.339;SOR=0.942 GT:AD:DP:GQ:PL 0/1:115,98:213:99:2641,0,2970 chr2 89610875 . T C 932.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=0.714;MLEAC=1;MLEAF=0.500;MQ=58.08;MQRankSum=-9.005;QD=6.86;ReadPosRankSum=0.269;SOR=0.800 GT:AD:DP:GQ:PL 0/1:98,38:136:99:961,0,3041 chr2 89611666 . C T 296.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.122;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=7.058;MLEAC=1;MLEAF=0.500;MQ=44.42;MQRankSum=1.279;QD=5.94;ReadPosRankSum=-0.866;SOR=1.880 GT:AD:DP:GQ:PL 0/1:37,13:50:99:325,0,986 chr2 89612070 . G A 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.43;MQRankSum=-0.319;QD=10.19;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:69,0,30 chr2 89618681 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.33;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 89622804 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 89622841 . T G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 89622902 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 89623015 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.16;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 89624275 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.460;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=5.379;MLEAC=1;MLEAF=0.500;MQ=49.02;MQRankSum=-2.952;QD=2.64;ReadPosRankSum=0.131;SOR=0.669 GT:AD:DP:GQ:PL 0/1:15,5:20:81:81,0,451 chr2 89624310 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.225;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=2.154;MLEAC=1;MLEAF=0.500;MQ=50.12;MQRankSum=-3.066;QD=2.13;ReadPosRankSum=0.785;SOR=0.750 GT:AD:DP:GQ:PL 0/1:17,5:22:75:75,0,495 chr2 89624355 . C T 171.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.501;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.88;MQRankSum=1.061;QD=7.81;ReadPosRankSum=0.444;SOR=0.473 GT:AD:DP:GQ:PL 0/1:14,8:22:99:200,0,367 chr2 89666007 . T A 279.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.56;QD=31.09;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:308,27,0 chr2 89764097 . T C 390.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.159;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.76;ReadPosRankSum=-0.314;SOR=1.721 GT:AD:DP:GQ:PL 0/1:7,15:22:99:419,0,162 chr2 89764973 . G A 59.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.786;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.187;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.98;ReadPosRankSum=0.000;SOR=1.371 GT:AD:DP:GQ:PL 0/1:11,4:15:88:88,0,244 chr2 89765492 . T G 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.842;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr2 89766676 . C G 70.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.515;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.86;ReadPosRankSum=1.559;SOR=1.179 GT:AD:DP:GQ:PL 0/1:6,3:9:99:99,0,106 chr2 89767387 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 89887095 . T C 756.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.434;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=2.893;MLEAC=1;MLEAF=0.500;MQ=48.79;MQRankSum=-0.404;QD=8.60;ReadPosRankSum=0.264;SOR=0.549 GT:AD:DP:GQ:PL 0/1:55,33:88:99:785,0,1435 chr2 89948111 . C T 1233.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.063;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=0.655;MLEAC=1;MLEAF=0.500;MQ=52.16;MQRankSum=-9.983;QD=8.17;ReadPosRankSum=-0.661;SOR=0.786 GT:AD:DP:GQ:PL 0/1:102,49:151:99:1262,0,2840 chr2 89968860 . G A 755.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.809;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=1.248;MLEAC=1;MLEAF=0.500;MQ=59.75;MQRankSum=-1.208;QD=15.42;ReadPosRankSum=0.928;SOR=0.404 GT:AD:DP:GQ:PL 0/1:21,28:49:99:784,0,594 chr2 89969293 . G A 1704.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.423;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=10.596;MLEAC=1;MLEAF=0.500;MQ=55.19;MQRankSum=0.033;QD=12.72;ReadPosRankSum=1.090;SOR=1.104 GT:AD:DP:GQ:PL 0/1:68,66:134:99:1733,0,1900 chr2 89969398 . T G 1683.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.972;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=5.257;MLEAC=1;MLEAF=0.500;MQ=50.43;MQRankSum=5.662;QD=20.29;ReadPosRankSum=1.814;SOR=0.285 GT:AD:DP:GQ:PL 0/1:26,57:83:99:1712,0,690 chr2 89969433 . G C 183.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.098;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=4.856;MLEAC=1;MLEAF=0.500;MQ=53.17;MQRankSum=-5.145;QD=3.47;ReadPosRankSum=-0.387;SOR=2.147 GT:AD:DP:GQ:PL 0/1:43,10:53:99:212,0,1387 chr2 89969477 . A C 829.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.888;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.01;MQRankSum=2.576;QD=29.63;ReadPosRankSum=0.186;SOR=1.121 GT:AD:DP:GQ:PL 0/1:3,25:28:27:858,0,27 chr2 89986064 . C A 1633.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.094;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=0.641;MLEAC=1;MLEAF=0.500;MQ=59.66;MQRankSum=-0.764;QD=12.19;ReadPosRankSum=-1.474;SOR=0.754 GT:AD:DP:GQ:PL 0/1:65,69:134:99:1662,0,1531 chr2 89986465 . G C 1143.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.823;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=1.889;MLEAC=1;MLEAF=0.500;MQ=46.71;MQRankSum=-1.017;QD=14.30;ReadPosRankSum=-1.197;SOR=0.493 GT:AD:DP:GQ:PL 0/1:35,45:80:99:1172,0,1041 chr2 90008830 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 90008852 . T A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=1.645;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 90009023 . T C 846.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.299;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=2.030;MLEAC=1;MLEAF=0.500;MQ=58.55;MQRankSum=0.378;QD=12.64;ReadPosRankSum=-0.366;SOR=0.446 GT:AD:DP:GQ:PL 0/1:33,34:67:99:875,0,822 chr2 90009066 . G A 618.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.738;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.76;MQRankSum=1.697;QD=10.14;ReadPosRankSum=-0.557;SOR=0.818 GT:AD:DP:GQ:PL 0/1:33,28:61:99:647,0,855 chr2 90022310 . G A 467.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.71;ReadPosRankSum=0.453;SOR=0.693 GT:AD:DP:GQ:PL 0/1:14,14:28:99:496,0,496 chr2 90038664 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.33;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 90046964 . A G 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=46.11;MQRankSum=-2.189;QD=4.82;ReadPosRankSum=1.006;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:62:62,0,146 chr2 90069574 . G A 3008.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.67;SOR=1.227 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3037,284,0 chr2 90069936 . G T 5669.77 PASS AC=2;AF=1.00;AN=2;DP=172;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.96;SOR=1.827 GT:AD:DP:GQ:PL 1/1:0,172:172:99:5698,516,0 chr2 90082833 . T C 1652.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.02;QD=34.43;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1681,144,0 chr2 90083003 . A G 1961.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.014;ClippingRankSum=0.000;DP=190;ExcessHet=3.0103;FS=2.034;MLEAC=1;MLEAF=0.500;MQ=58.02;MQRankSum=-7.344;QD=10.33;ReadPosRankSum=1.205;SOR=0.898 GT:AD:DP:GQ:PL 0/1:133,57:190:99:1990,0,5403 chr2 90083007 . A G 2015.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.026;ClippingRankSum=0.000;DP=191;ExcessHet=3.0103;FS=1.261;MLEAC=1;MLEAF=0.500;MQ=58.07;MQRankSum=-7.974;QD=10.55;ReadPosRankSum=0.781;SOR=0.817 GT:AD:DP:GQ:PL 0/1:132,59:191:99:2044,0,5474 chr2 90083084 . G T 1578.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.397;ClippingRankSum=0.000;DP=224;ExcessHet=3.0103;FS=2.460;MLEAC=1;MLEAF=0.500;MQ=59.26;MQRankSum=-4.435;QD=7.05;ReadPosRankSum=0.219;SOR=0.847 GT:AD:DP:GQ:PL 0/1:152,72:224:99:1607,0,4230 chr2 90083143 . A G 1259.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.988;ClippingRankSum=0.000;DP=183;ExcessHet=3.0103;FS=2.098;MLEAC=1;MLEAF=0.500;MQ=58.35;MQRankSum=-2.883;QD=6.92;ReadPosRankSum=0.817;SOR=0.877 GT:AD:DP:GQ:PL 0/1:127,55:182:99:1288,0,3876 chr2 90083511 . G T 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.02;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr2 90100872 . T G 599.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.98;QD=28.76;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:628,51,0 chr2 90172967 . G T 3409.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.16;QD=24.66;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,77:77:99:3438,232,0 chr2 90172968 . T C 3409.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.16;QD=25.02;SOR=0.828 GT:AD:DP:GQ:PL 1/1:0,77:77:99:3438,232,0 chr2 90173209 . A G 1320.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.050;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.890;MLEAC=1;MLEAF=0.500;MQ=49.59;MQRankSum=0.671;QD=17.85;ReadPosRankSum=-0.677;SOR=0.688 GT:AD:DP:GQ:PL 0/1:32,42:74:99:1349,0,978 chr2 90173429 . A C 935.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.786;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.894;MLEAC=1;MLEAF=0.500;MQ=50.55;MQRankSum=0.991;QD=12.15;ReadPosRankSum=-1.093;SOR=0.872 GT:AD:DP:GQ:PL 0/1:43,34:77:99:964,0,1186 chr2 90190408 . C T 3919.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.66;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3948,360,0 chr2 90190754 . A G 3102.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3131,291,0 chr2 90210549 . A G 777.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.040;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.912;MLEAC=1;MLEAF=0.500;MQ=58.35;MQRankSum=-4.144;QD=9.48;ReadPosRankSum=-1.318;SOR=0.571 GT:AD:DP:GQ:PL 0/1:52,30:82:99:806,0,1585 chr2 90210602 . C T 327.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.181;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=3.719;MLEAC=1;MLEAF=0.500;MQ=58.90;MQRankSum=-2.440;QD=7.45;ReadPosRankSum=0.895;SOR=0.203 GT:AD:DP:GQ:PL 0/1:33,11:44:99:356,0,1336 chr2 90210612 . T C 301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.276;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=6.125;MLEAC=1;MLEAF=0.500;MQ=58.75;MQRankSum=-2.398;QD=7.74;ReadPosRankSum=0.161;SOR=0.154 GT:AD:DP:GQ:PL 0/1:29,10:39:99:330,0,1186 chr2 90210631 . T G 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.869;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=4.843;MLEAC=1;MLEAF=0.500;MQ=58.19;MQRankSum=-2.375;QD=5.36;ReadPosRankSum=-1.356;SOR=0.127 GT:AD:DP:GQ:PL 0/1:20,7:27:99:173,0,694 chr2 90210640 . T C 154.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.186;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=2.036;MLEAC=1;MLEAF=0.500;MQ=58.04;MQRankSum=0.964;QD=6.19;ReadPosRankSum=0.424;SOR=1.516 GT:AD:DP:GQ:PL 0/1:18,7:25:99:183,0,628 chr2 90220982 . G T 1868.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.956;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=2.648;MLEAC=2;MLEAF=1.00;MQ=59.56;MQRankSum=7.485;QD=33.37;ReadPosRankSum=1.498;SOR=1.697 GT:AD:DP:GQ:PL 1/1:2,54:56:99:1897,118,0 chr2 90221099 . C T 5173.77 PASS AC=2;AF=1.00;AN=2;DP=153;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.82;SOR=1.548 GT:AD:DP:GQ:PL 1/1:0,153:153:99:5202,459,0 chr2 90221325 . C T 4195.77 PASS AC=2;AF=1.00;AN=2;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.75;QD=31.55;SOR=1.358 GT:AD:DP:GQ:PL 1/1:0,133:133:99:4224,395,0 chr2 90250518 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 90253584 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.60;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 90293551 . G A 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=45.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr2 90309244 . C T 134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.732;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.08;MQRankSum=0.549;QD=14.97;ReadPosRankSum=-0.282;SOR=0.941 GT:AD:DP:GQ:PL 0/1:2,7:9:57:163,0,57 chr2 90309284 . G T 38.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.10;MQRankSum=0.090;QD=4.85;ReadPosRankSum=-1.345;SOR=0.307 GT:AD:DP:GQ:PL 0/1:5,3:8:67:67,0,151 chr2 90383760 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.68;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 90383906 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 90383914 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 90385654 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.01;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 90385666 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.01;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 91442637 . G A 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr2 91442641 . G C 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr2 91501184 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.53;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 91501186 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.53;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 91531500 . A G 346.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=1.837;MLEAC=1;MLEAF=0.500;MQ=57.49;MQRankSum=1.011;QD=15.76;ReadPosRankSum=1.687;SOR=1.244 GT:AD:DP:GQ:PL 0/1:9,13:22:99:375,0,208 chr2 91565306 . G A 201.79 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=41.14;MQRankSum=-2.287;QD=20.18;ReadPosRankSum=-0.728;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,8:10:22:230,0,22 chr2 91565357 . C T 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.13;MQRankSum=-1.981;QD=13.11;ReadPosRankSum=0.241;SOR=0.180 GT:AD:DP:GQ:PL 0/1:2,5:7:63:120,0,63 chr2 91568103 . T C 52.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.61;MQRankSum=0.967;QD=17.61;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:18:81,0,18 chr2 91568128 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 91590118 . C G 104.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.303;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.03;MQRankSum=-1.981;QD=10.48;ReadPosRankSum=0.805;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:133,0,142 chr2 91590320 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.43;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 91604631 . T C 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr2 91623908 . T C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.07;QD=25.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 91654829 . G A 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=46.34;MQRankSum=1.282;QD=11.16;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr2 91859355 . T C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.33;MQRankSum=-0.524;QD=7.95;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,76 chr2 91859406 . G C 331.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.075;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.796;MLEAC=1;MLEAF=0.500;MQ=48.22;MQRankSum=-3.291;QD=22.12;ReadPosRankSum=0.152;SOR=2.115 GT:AD:DP:GQ:PL 0/1:6,9:15:99:360,0,316 chr2 91859412 . T C 325.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.253;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=2.596;MLEAC=1;MLEAF=0.500;MQ=49.04;MQRankSum=-3.517;QD=20.36;ReadPosRankSum=0.969;SOR=1.802 GT:AD:DP:GQ:PL 0/1:7,9:16:99:354,0,380 chr2 91859416 . C T 325.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.405;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=5.315;MLEAC=1;MLEAF=0.500;MQ=49.75;MQRankSum=-3.712;QD=19.16;ReadPosRankSum=1.233;SOR=2.303 GT:AD:DP:GQ:PL 0/1:8,9:17:99:354,0,380 chr2 91859503 . G A 280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.364;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.62;MQRankSum=-3.706;QD=13.37;ReadPosRankSum=-1.698;SOR=0.495 GT:AD:DP:GQ:PL 0/1:7,14:21:99:309,0,161 chr2 91859523 . C T 223.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.444;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.40;MQRankSum=-3.923;QD=13.99;ReadPosRankSum=0.535;SOR=1.085 GT:AD:DP:GQ:PL 0/1:7,9:16:99:252,0,174 chr2 91872721 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.12;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,283 chr2 91872725 . T A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.12;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,283 chr2 91872739 . T C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.12;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,283 chr2 91941016 . C A 64.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.201;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.82;MQRankSum=-0.651;QD=5.40;ReadPosRankSum=0.013;SOR=0.760 GT:AD:DP:GQ:PL 0/1:7,5:12:93:93,0,188 chr2 91941723 . T C 835.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.138;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.300;MLEAC=1;MLEAF=0.500;MQ=51.32;MQRankSum=-6.260;QD=16.72;ReadPosRankSum=-0.119;SOR=0.493 GT:AD:DP:GQ:PL 0/1:21,29:50:99:864,0,573 chr2 91974919 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.20;MQRankSum=-1.834;QD=7.29;ReadPosRankSum=0.623;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,2:6:72:72,0,162 chr2 91974921 . A C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.20;MQRankSum=-1.834;QD=7.29;ReadPosRankSum=0.253;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,2:6:72:72,0,162 chr2 91974943 . T G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.63;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=-0.674;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,78 chr2 91974946 . G C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.63;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=-0.674;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,78 chr2 91986490 . T C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.10;QD=27.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 91986495 . T A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.10;QD=27.63;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 91986541 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.40;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 91986562 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.40;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 91999909 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.62;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=1.383;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,161 chr2 91999913 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.62;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=0.000;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,161 chr2 91999916 . A T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.62;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=0.000;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,161 chr2 91999929 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.62;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=0.000;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,155 chr2 91999934 . A G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.62;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=0.000;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,155 chr2 91999958 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.17;MQRankSum=-1.645;QD=9.35;ReadPosRankSum=0.524;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,191 chr2 91999963 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.17;MQRankSum=-1.645;QD=9.35;ReadPosRankSum=0.000;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,191 chr2 91999968 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.17;MQRankSum=-1.645;QD=9.35;ReadPosRankSum=-0.524;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,191 chr2 94195995 . C T 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.92;MQRankSum=-0.431;QD=27.13;ReadPosRankSum=-0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr2 94196506 . G A 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr2 94196754 . C T 182.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.963;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=5.994;MLEAC=1;MLEAF=0.500;MQ=54.00;MQRankSum=-1.509;QD=5.71;ReadPosRankSum=-1.291;SOR=0.157 GT:AD:DP:GQ:PL 0/1:21,11:32:99:211,0,652 chr2 94198914 . A G 653.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.460;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=12.860;MLEAC=1;MLEAF=0.500;MQ=49.35;MQRankSum=1.286;QD=13.08;ReadPosRankSum=-0.334;SOR=1.727 GT:AD:DP:GQ:PL 0/1:26,24:50:99:682,0,585 chr2 94199062 . C T 558.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.447;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=13.236;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.61;ReadPosRankSum=-1.326;SOR=1.934 GT:AD:DP:GQ:PL 0/1:5,16:21:99:587,0,146 chr2 94199564 . C T 1862.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.797;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=1.429;MLEAC=1;MLEAF=0.500;MQ=56.35;MQRankSum=-1.051;QD=13.80;ReadPosRankSum=0.058;SOR=0.831 GT:AD:DP:GQ:PL 0/1:66,69:135:99:1891,0,1853 chr2 94203345 . G C 2494.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.699;ClippingRankSum=0.000;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.83;MQRankSum=-7.687;QD=17.21;ReadPosRankSum=0.330;SOR=0.659 GT:AD:DP:GQ:PL 0/1:55,90:145:99:2523,0,1357 chr2 94212503 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 94212997 . G C 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=27.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr2 94213243 . G A 126.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.015;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.26;MQRankSum=-1.559;QD=14.09;ReadPosRankSum=0.812;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,6:9:64:155,0,64 chr2 94214719 . C T 122.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.84;MQRankSum=-0.489;QD=15.35;ReadPosRankSum=-0.619;SOR=0.582 GT:AD:DP:GQ:PL 0/1:3,5:8:67:151,0,67 chr2 94216756 . A G 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=8.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.82;ReadPosRankSum=-0.180;SOR=1.850 GT:AD:DP:GQ:PL 0/1:2,5:7:62:174,0,62 chr2 94265676 . A G 150.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.210;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.04;MQRankSum=0.431;QD=25.13;ReadPosRankSum=-0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:179,0,24 chr2 94598578 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 94598593 . G T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 94847885 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 94857002 . C G 336.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.06;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:36:365,36,0 chr2 94861933 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 94862199 . A G 826.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.93;QD=28.51;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:87:855,87,0 chr2 94862425 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 94871500 . C G 2906.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.70;SOR=3.202 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2935,240,0 chr2 94871827 . C T 5217.77 PASS AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.55;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,151:151:99:5246,454,0 chr2 94871877 . A G 4890.77 PASS AC=2;AF=1.00;AN=2;DP=142;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.44;SOR=0.721 GT:AD:DP:GQ:PL 1/1:0,142:142:99:4919,426,0 chr2 94872591 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 94873959 . C A 3566.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.369;ClippingRankSum=0.000;DP=193;ExcessHet=3.0103;FS=39.244;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.58;ReadPosRankSum=0.297;SOR=0.676 GT:AD:DP:GQ:PL 0/1:65,127:192:99:3595,0,1519 chr2 94874825 . C T 1355.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.219;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=0.664;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.12;ReadPosRankSum=1.189;SOR=0.787 GT:AD:DP:GQ:PL 0/1:79,55:134:99:1384,0,2177 chr2 94876097 . C G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 94876367 . C T 1365.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.49;SOR=4.863 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1394,105,0 chr2 94877043 . G C 183.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.64;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:212,18,0 chr2 94892770 . G A 310.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.53;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:339,27,0 chr2 95033238 . G C 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=-0.385;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,73 chr2 95067972 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 95122065 . T G 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.94;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr2 95180413 . T C 107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.78;ReadPosRankSum=0.278;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:136,0,212 chr2 95182270 . T C 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr2 95279820 . G A 865.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.550;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.82;ReadPosRankSum=-0.741;SOR=0.644 GT:AD:DP:GQ:PL 0/1:14,32:46:99:894,0,379 chr2 95280082 . G T 913.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.050;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=0.798;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=0.588;SOR=0.874 GT:AD:DP:GQ:PL 0/1:55,40:95:99:942,0,1398 chr2 95281337 . A G 1006.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.055;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=2.674;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.49;ReadPosRankSum=-1.146;SOR=0.927 GT:AD:DP:GQ:PL 0/1:55,41:96:99:1035,0,1484 chr2 95285899 . G A 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.44;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 95286429 . C G 6076.77 PASS AC=2;AF=1.00;AN=2;DP=184;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.03;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,184:184:99:6105,556,0 chr2 95286893 . A G 2756.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.555;ClippingRankSum=0.000;DP=199;ExcessHet=3.0103;FS=5.116;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.92;ReadPosRankSum=-0.022;SOR=0.429 GT:AD:DP:GQ:PL 0/1:80,118:198:99:2785,0,1923 chr2 95374430 . C G 1501.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.097;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=4.511;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=-0.589;SOR=0.393 GT:AD:DP:GQ:PL 0/1:59,58:117:99:1530,0,1573 chr2 95410661 . C T 1953.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.79;QD=29.35;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1982,150,0 chr2 95518675 . C A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 95546661 . C G 163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.130;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=2.066;MLEAC=1;MLEAF=0.500;MQ=55.87;MQRankSum=-4.102;QD=7.12;ReadPosRankSum=-2.505;SOR=0.283 GT:AD:DP:GQ:PL 0/1:18,5:23:99:192,0,1111 chr2 95546668 . C A 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.148;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.31;MQRankSum=-4.691;QD=6.65;ReadPosRankSum=-1.773;SOR=0.368 GT:AD:DP:GQ:PL 0/1:22,7:29:99:221,0,1223 chr2 95546697 . C T 298.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.332;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=3.442;MLEAC=1;MLEAF=0.500;MQ=56.51;MQRankSum=-5.338;QD=7.29;ReadPosRankSum=0.198;SOR=0.223 GT:AD:DP:GQ:PL 0/1:31,10:41:99:327,0,1533 chr2 95546699 . C T 298.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.332;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=3.442;MLEAC=1;MLEAF=0.500;MQ=56.51;MQRankSum=-5.338;QD=7.29;ReadPosRankSum=0.812;SOR=0.223 GT:AD:DP:GQ:PL 0/1:31,10:41:99:327,0,1533 chr2 95546786 . G C 219.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.460;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=1.363;MLEAC=1;MLEAF=0.500;MQ=58.13;MQRankSum=-7.418;QD=3.43;ReadPosRankSum=-0.118;SOR=0.396 GT:AD:DP:GQ:PL 0/1:54,10:64:99:248,0,3412 chr2 95546790 . G A 219.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.215;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=1.334;MLEAC=1;MLEAF=0.500;MQ=58.21;MQRankSum=-7.600;QD=3.28;ReadPosRankSum=-0.316;SOR=0.432 GT:AD:DP:GQ:PL 0/1:57,10:67:99:248,0,3412 chr2 95546810 . C T 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.281;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.78;MQRankSum=-7.791;QD=2.14;ReadPosRankSum=-1.775;SOR=0.479 GT:AD:DP:GQ:PL 0/1:64,8:72:99:182,0,6075 chr2 95546816 . T C 143.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.445;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=6.136;MLEAC=1;MLEAF=0.500;MQ=58.71;MQRankSum=-7.713;QD=2.00;ReadPosRankSum=-1.484;SOR=1.538 GT:AD:DP:GQ:PL 0/1:65,7:72:99:172,0,6088 chr2 95546964 . C G 161.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.114;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=4.667;MLEAC=1;MLEAF=0.500;MQ=57.63;MQRankSum=-7.086;QD=2.79;ReadPosRankSum=-1.613;SOR=0.828 GT:AD:DP:GQ:PL 0/1:46,12:58:99:190,0,1404 chr2 95546992 . A G 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.469;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=3.994;MLEAC=1;MLEAF=0.500;MQ=58.23;MQRankSum=-6.578;QD=3.37;ReadPosRankSum=1.206;SOR=0.617 GT:AD:DP:GQ:PL 0/1:38,7:45:99:180,0,1569 chr2 95546996 . A G 148.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.763;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=3.994;MLEAC=1;MLEAF=0.500;MQ=58.23;MQRankSum=-6.578;QD=3.31;ReadPosRankSum=1.613;SOR=0.617 GT:AD:DP:GQ:PL 0/1:38,7:45:99:177,0,1617 chr2 95547006 . T C 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.512;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=3.948;MLEAC=1;MLEAF=0.500;MQ=58.01;MQRankSum=-6.731;QD=3.10;ReadPosRankSum=2.078;SOR=0.627 GT:AD:DP:GQ:PL 0/1:40,7:47:99:174,0,1659 chr2 95547007 . G T 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.926;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=3.948;MLEAC=1;MLEAF=0.500;MQ=58.01;MQRankSum=-6.731;QD=3.10;ReadPosRankSum=2.122;SOR=0.627 GT:AD:DP:GQ:PL 0/1:40,7:47:99:174,0,1659 chr2 95547039 . C T 123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.481;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=1.631;MLEAC=1;MLEAF=0.500;MQ=57.07;MQRankSum=-6.004;QD=3.26;ReadPosRankSum=0.234;SOR=0.307 GT:AD:DP:GQ:PL 0/1:30,8:38:99:152,0,934 chr2 95547099 . T C 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.195;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.42;MQRankSum=-3.683;QD=4.34;ReadPosRankSum=1.311;SOR=0.465 GT:AD:DP:GQ:PL 0/1:15,5:20:99:115,0,532 chr2 95547111 . C T 139.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.751;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.28;MQRankSum=-3.569;QD=7.36;ReadPosRankSum=1.739;SOR=0.527 GT:AD:DP:GQ:PL 0/1:14,5:19:99:168,0,1047 chr2 95547121 . T G 142.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.260;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.13;MQRankSum=-3.451;QD=7.93;ReadPosRankSum=2.012;SOR=0.602 GT:AD:DP:GQ:PL 0/1:13,5:18:99:171,0,1008 chr2 95547129 . A G 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.073;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.76;MQRankSum=-3.200;QD=9.11;ReadPosRankSum=0.969;SOR=0.804 GT:AD:DP:GQ:PL 0/1:11,5:16:99:174,0,928 chr2 95547139 . C T 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.972;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.53;MQRankSum=-3.065;QD=10.12;ReadPosRankSum=0.415;SOR=0.941 GT:AD:DP:GQ:PL 0/1:10,5:15:99:180,0,764 chr2 95547143 . A G 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.972;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.53;MQRankSum=-3.065;QD=10.12;ReadPosRankSum=0.415;SOR=0.941 GT:AD:DP:GQ:PL 0/1:10,5:15:99:180,0,764 chr2 95755273 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 95800327 . G A 233.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.38;ReadPosRankSum=-0.549;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,7:10:95:262,0,95 chr2 95838846 . C T 326.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.780;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.54;ReadPosRankSum=1.715;SOR=0.569 GT:AD:DP:GQ:PL 0/1:43,16:59:99:355,0,1070 chr2 95852274 . G A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,114 chr2 95854005 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 95855978 . G A 2431.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.956;ClippingRankSum=0.000;DP=165;ExcessHet=3.0103;FS=1.993;MLEAC=1;MLEAF=0.500;MQ=59.91;MQRankSum=-0.417;QD=14.74;ReadPosRankSum=0.018;SOR=0.543 GT:AD:DP:GQ:PL 0/1:75,90:165:99:2460,0,1888 chr2 95857258 . A C 115.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.471;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=2.881;MLEAC=1;MLEAF=0.500;MQ=53.94;MQRankSum=-0.129;QD=9.65;ReadPosRankSum=0.849;SOR=1.721 GT:AD:DP:GQ:PL 0/1:8,4:12:99:144,0,397 chr2 95857261 . A C 115.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.471;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=2.881;MLEAC=1;MLEAF=0.500;MQ=53.94;MQRankSum=-0.129;QD=9.65;ReadPosRankSum=0.849;SOR=1.721 GT:AD:DP:GQ:PL 0/1:8,4:12:99:144,0,397 chr2 95857299 . A G 61.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.588;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=2.869;MLEAC=1;MLEAF=0.500;MQ=51.11;MQRankSum=0.613;QD=4.12;ReadPosRankSum=0.590;SOR=2.376 GT:AD:DP:GQ:PL 0/1:11,4:15:90:90,0,301 chr2 95857348 . T C 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.244;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.86;MQRankSum=-0.131;QD=7.30;ReadPosRankSum=0.333;SOR=0.941 GT:AD:DP:GQ:PL 0/1:12,7:19:99:167,0,330 chr2 95882320 . C T 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.323;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.14;MQRankSum=-0.751;QD=7.17;ReadPosRankSum=-0.189;SOR=0.883 GT:AD:DP:GQ:PL 0/1:10,6:16:99:143,0,273 chr2 95888024 . G C 134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.748;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.39;MQRankSum=-3.450;QD=7.09;ReadPosRankSum=-0.077;SOR=0.976 GT:AD:DP:GQ:PL 0/1:11,8:19:99:163,0,322 chr2 95889774 . C A 264.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.246;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=3.769;MLEAC=1;MLEAF=0.500;MQ=54.31;MQRankSum=-4.636;QD=10.18;ReadPosRankSum=-0.588;SOR=1.536 GT:AD:DP:GQ:PL 0/1:16,10:26:99:293,0,454 chr2 95903269 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 95908803 . C T 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=51.04;MQRankSum=-0.183;QD=3.43;ReadPosRankSum=-0.129;SOR=0.078 GT:AD:DP:GQ:PL 0/1:7,4:11:66:66,0,213 chr2 95912499 . G A 196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.875;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=54.62;MQRankSum=-1.616;QD=17.89;ReadPosRankSum=0.349;SOR=0.148 GT:AD:DP:GQ:PL 0/1:4,7:11:99:225,0,134 chr2 95917987 . A C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.69;MQRankSum=-0.674;QD=21.19;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 95921748 . C T 95.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=0.854;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,6:8:25:124,0,25 chr2 95934821 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.10;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 95934822 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.10;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 95934828 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.10;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 95935564 . G A 379.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.544;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=1.044;MLEAC=1;MLEAF=0.500;MQ=44.51;MQRankSum=-3.597;QD=6.44;ReadPosRankSum=-0.800;SOR=0.501 GT:AD:DP:GQ:PL 0/1:38,21:59:99:408,0,911 chr2 95935597 . T C 405.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.400;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.087;MLEAC=1;MLEAF=0.500;MQ=44.00;MQRankSum=-4.126;QD=7.66;ReadPosRankSum=-1.294;SOR=0.847 GT:AD:DP:GQ:PL 0/1:33,20:53:99:434,0,771 chr2 95935616 . C T 592.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.510;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=3.796;MLEAC=1;MLEAF=0.500;MQ=44.24;MQRankSum=-4.436;QD=10.40;ReadPosRankSum=1.810;SOR=0.987 GT:AD:DP:GQ:PL 0/1:35,22:57:99:621,0,825 chr2 95935741 . G A 112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=43.68;MQRankSum=-0.957;QD=8.67;ReadPosRankSum=-1.777;SOR=0.446 GT:AD:DP:GQ:PL 0/1:9,4:13:99:141,0,370 chr2 95935743 . A G 112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.158;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=43.68;MQRankSum=-0.957;QD=8.67;ReadPosRankSum=-1.705;SOR=0.446 GT:AD:DP:GQ:PL 0/1:9,4:13:99:141,0,370 chr2 95935765 . C T 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.602;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=4.393;MLEAC=1;MLEAF=0.500;MQ=42.85;MQRankSum=-0.758;QD=8.34;ReadPosRankSum=0.000;SOR=0.061 GT:AD:DP:GQ:PL 0/1:7,4:11:99:120,0,239 chr2 95935799 . A T 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.27;MQRankSum=-1.036;QD=14.79;ReadPosRankSum=1.440;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:117,0,151 chr2 95935823 . A G 71.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.12;MQRankSum=-1.036;QD=14.35;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:100,0,68 chr2 95938642 . C T 214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=46.37;MQRankSum=-2.515;QD=23.86;ReadPosRankSum=0.000;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:99:243,0,133 chr2 95938643 . A G 214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=46.37;MQRankSum=-2.515;QD=23.86;ReadPosRankSum=0.000;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:99:243,0,133 chr2 95938672 . A T 348.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=43.79;MQRankSum=-2.522;QD=24.91;ReadPosRankSum=-0.626;SOR=2.303 GT:AD:DP:GQ:PL 0/1:3,11:14:83:377,0,83 chr2 95938768 . C T 1366.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.039;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.12;MQRankSum=-4.694;QD=19.81;ReadPosRankSum=0.229;SOR=0.844 GT:AD:DP:GQ:PL 0/1:22,47:69:99:1395,0,576 chr2 95938843 . A G 2918.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.992;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=4.134;MLEAC=1;MLEAF=0.500;MQ=53.15;MQRankSum=-6.789;QD=18.71;ReadPosRankSum=1.664;SOR=0.437 GT:AD:DP:GQ:PL 0/1:46,110:156:99:2947,0,1011 chr2 95938884 . A T 2852.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.116;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.99;MQRankSum=-6.998;QD=19.41;ReadPosRankSum=0.516;SOR=0.723 GT:AD:DP:GQ:PL 0/1:43,104:147:99:2881,0,977 chr2 95938927 . T C 300.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.705;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=5.012;MLEAC=1;MLEAF=0.500;MQ=49.27;MQRankSum=-2.114;QD=2.53;ReadPosRankSum=0.230;SOR=1.390 GT:AD:DP:GQ:PL 0/1:98,21:119:99:329,0,3122 chr2 95938931 . C T 2230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.477;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=5.291;MLEAC=1;MLEAF=0.500;MQ=48.91;MQRankSum=-4.959;QD=19.74;ReadPosRankSum=-1.662;SOR=1.238 GT:AD:DP:GQ:PL 0/1:37,76:113:99:2259,0,748 chr2 95938982 . T C 671.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.142;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=3.802;MLEAC=1;MLEAF=0.500;MQ=41.53;MQRankSum=-4.012;QD=18.66;ReadPosRankSum=-1.574;SOR=2.262 GT:AD:DP:GQ:PL 0/1:15,21:36:99:700,0,472 chr2 95939037 . T A 53.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.20;MQRankSum=-1.269;QD=4.48;ReadPosRankSum=0.435;SOR=0.148 GT:AD:DP:GQ:PL 0/1:9,3:12:82:82,0,390 chr2 95940307 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 95940311 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 95940317 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 95940320 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 95945011 . T A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.83;MQRankSum=-0.967;QD=16.59;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:78:78,0,113 chr2 95945020 . T G 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=45.17;MQRankSum=-1.645;QD=17.75;ReadPosRankSum=-0.524;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:99:117,0,110 chr2 95945088 . T C 580.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.048;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.11;MQRankSum=-2.484;QD=20.03;ReadPosRankSum=-0.113;SOR=0.730 GT:AD:DP:GQ:PL 0/1:11,18:29:99:609,0,364 chr2 95945151 . T C 989.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.302;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.223;MLEAC=1;MLEAF=0.500;MQ=54.81;MQRankSum=-3.200;QD=23.02;ReadPosRankSum=0.477;SOR=0.581 GT:AD:DP:GQ:PL 0/1:16,27:43:99:1018,0,605 chr2 95945173 . T G 992.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.013;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=2.837;MLEAC=1;MLEAF=0.500;MQ=55.12;MQRankSum=-2.856;QD=24.21;ReadPosRankSum=0.457;SOR=0.751 GT:AD:DP:GQ:PL 0/1:14,27:41:99:1021,0,584 chr2 95945204 . T C 528.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.194;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=4.072;MLEAC=1;MLEAF=0.500;MQ=54.47;MQRankSum=-1.594;QD=17.63;ReadPosRankSum=0.509;SOR=1.781 GT:AD:DP:GQ:PL 0/1:12,18:30:99:557,0,297 chr2 95945270 . G A 180.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.545;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.21;MQRankSum=0.077;QD=13.91;ReadPosRankSum=-0.783;SOR=1.609 GT:AD:DP:GQ:PL 0/1:7,6:13:99:209,0,207 chr2 95948464 . A G 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.40;ReadPosRankSum=-1.368;SOR=2.833 GT:AD:DP:GQ:PL 0/1:4,3:7:99:101,0,112 chr2 95951446 . A G 109.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.425;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.66;MQRankSum=-2.859;QD=7.84;ReadPosRankSum=1.044;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,4:14:99:138,0,1451 chr2 95951461 . G T 109.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.339;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.32;MQRankSum=-2.458;QD=8.44;ReadPosRankSum=-0.221;SOR=0.527 GT:AD:DP:GQ:PL 0/1:9,4:13:99:138,0,1525 chr2 95951480 . T A 67.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.100;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.32;MQRankSum=-3.323;QD=5.21;ReadPosRankSum=0.622;SOR=0.765 GT:AD:DP:GQ:PL 0/1:10,3:13:96:96,0,1528 chr2 95951483 . G A 67.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.473;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.91;MQRankSum=-2.838;QD=5.65;ReadPosRankSum=0.259;SOR=0.941 GT:AD:DP:GQ:PL 0/1:9,3:12:96:96,0,1528 chr2 95953940 . T G 217.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.437;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=8.806;MLEAC=1;MLEAF=0.500;MQ=52.11;MQRankSum=-4.138;QD=8.38;ReadPosRankSum=-0.242;SOR=3.198 GT:AD:DP:GQ:PL 0/1:18,8:26:99:246,0,525 chr2 95953986 . C T 492.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.419;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=7.928;MLEAC=1;MLEAF=0.500;MQ=49.90;MQRankSum=-5.027;QD=12.97;ReadPosRankSum=-0.690;SOR=2.232 GT:AD:DP:GQ:PL 0/1:21,17:38:99:521,0,660 chr2 95954026 . G A 690.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.457;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.89;MQRankSum=-5.401;QD=16.06;ReadPosRankSum=0.413;SOR=0.593 GT:AD:DP:GQ:PL 0/1:21,22:43:99:719,0,647 chr2 95954051 . A C 725.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.599;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=4.040;MLEAC=1;MLEAF=0.500;MQ=50.28;MQRankSum=-5.307;QD=15.78;ReadPosRankSum=0.858;SOR=0.627 GT:AD:DP:GQ:PL 0/1:22,24:46:99:754,0,641 chr2 95954083 . T C 455.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.639;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.32;MQRankSum=-5.994;QD=9.70;ReadPosRankSum=-0.133;SOR=0.763 GT:AD:DP:GQ:PL 0/1:30,17:47:99:484,0,1176 chr2 95954084 . A G 697.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.258;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=4.546;MLEAC=1;MLEAF=0.500;MQ=51.32;MQRankSum=-5.403;QD=16.23;ReadPosRankSum=1.077;SOR=1.609 GT:AD:DP:GQ:PL 0/1:24,19:43:99:726,0,925 chr2 95954089 . C G 823.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.029;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=4.461;MLEAC=1;MLEAF=0.500;MQ=51.23;MQRankSum=-5.421;QD=18.72;ReadPosRankSum=0.857;SOR=1.609 GT:AD:DP:GQ:PL 0/1:22,22:44:99:852,0,901 chr2 95954090 . A C 823.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.441;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=4.376;MLEAC=1;MLEAF=0.500;MQ=51.44;MQRankSum=-5.514;QD=18.31;ReadPosRankSum=0.909;SOR=1.483 GT:AD:DP:GQ:PL 0/1:23,22:45:99:852,0,901 chr2 95954105 . T C 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.222;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=6.457;MLEAC=1;MLEAF=0.500;MQ=52.96;MQRankSum=-1.266;QD=4.18;ReadPosRankSum=1.608;SOR=2.133 GT:AD:DP:GQ:PL 0/1:35,8:43:99:208,0,1128 chr2 95954125 . C A 209.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.182;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=4.079;MLEAC=1;MLEAF=0.500;MQ=52.55;MQRankSum=-1.101;QD=5.67;ReadPosRankSum=-0.854;SOR=1.765 GT:AD:DP:GQ:PL 0/1:29,8:37:99:238,0,959 chr2 95960544 . C T 578.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.46;QD=28.21;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,15:15:45:607,45,0 chr2 95991827 . A G 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.63;MQRankSum=-0.489;QD=19.60;ReadPosRankSum=-0.489;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr2 96013636 . C T 1105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.124;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=3.262;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.29;ReadPosRankSum=0.025;SOR=0.380 GT:AD:DP:GQ:PL 0/1:46,44:90:99:1134,0,1378 chr2 96013992 . G C 3841.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.711;ClippingRankSum=0.000;DP=304;ExcessHet=3.0103;FS=1.947;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.64;ReadPosRankSum=0.134;SOR=0.828 GT:AD:DP:GQ:PL 0/1:155,149:304:99:3870,0,3775 chr2 96014123 . T G 536.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.332;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=2.420;MLEAC=1;MLEAF=0.500;MQ=58.78;MQRankSum=-2.635;QD=13.09;ReadPosRankSum=0.572;SOR=0.217 GT:AD:DP:GQ:PL 0/1:23,18:41:99:565,0,802 chr2 96014220 . C T 178.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.44;MQRankSum=-1.383;QD=29.80;ReadPosRankSum=1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:207,0,24 chr2 96014230 . A G 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.62;QD=28.25;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr2 96019128 . A G 2160.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.98;QD=32.74;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2189,197,0 chr2 96019273 . A G 367.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.108;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=3.352;MLEAC=1;MLEAF=0.500;MQ=58.46;MQRankSum=-2.460;QD=12.68;ReadPosRankSum=0.367;SOR=1.272 GT:AD:DP:GQ:PL 0/1:15,14:29:99:396,0,473 chr2 96114968 . T G 9885.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-1.134;ClippingRankSum=0.000;DP=312;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.69;ReadPosRankSum=1.346;SOR=0.236 GT:AD:DP:GQ:PL 1/1:1,311:312:99:9914,894,0 chr2 96116247 . G C 1526.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.65;SOR=3.967 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1555,117,0 chr2 96130118 . T C 3967.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.52;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,122:122:99:3996,366,0 chr2 96158550 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 96193176 . A G 872.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.811;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=5.696;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.77;ReadPosRankSum=-0.957;SOR=0.314 GT:AD:DP:GQ:PL 0/1:43,38:81:99:901,0,1233 chr2 96193296 . A G 821.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.107;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.74;ReadPosRankSum=-0.293;SOR=0.629 GT:AD:DP:GQ:PL 0/1:38,32:70:99:850,0,971 chr2 96195421 . C G 288.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.123;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=1.497;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.63;ReadPosRankSum=-0.678;SOR=1.136 GT:AD:DP:GQ:PL 0/1:17,13:30:99:317,0,450 chr2 96208852 . T C 4997.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.542;ClippingRankSum=0.000;DP=256;ExcessHet=3.0103;FS=3.631;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.52;ReadPosRankSum=-0.687;SOR=0.955 GT:AD:DP:GQ:PL 0/1:128,128:256:99:5026,0,7288 chr2 96208853 . T C 4997.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.691;ClippingRankSum=0.000;DP=255;ExcessHet=3.0103;FS=5.241;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-1.123;SOR=1.001 GT:AD:DP:GQ:PL 0/1:126,129:255:99:5026,0,7288 chr2 96253904 . C T 2262.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.265;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=3.843;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.00;ReadPosRankSum=-1.135;SOR=1.055 GT:AD:DP:GQ:PL 0/1:87,87:174:99:2291,0,2449 chr2 96254035 . A G 3023.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.621;ClippingRankSum=0.000;DP=228;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=1.406;SOR=0.716 GT:AD:DP:GQ:PL 0/1:112,116:228:99:3052,0,2841 chr2 96255155 . T G 632.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.474;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.09;ReadPosRankSum=0.205;SOR=1.382 GT:AD:DP:GQ:PL 0/1:11,19:30:99:661,0,343 chr2 96255255 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:32:75,0,32 chr2 96262227 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 96268766 . T C 1671.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.44;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1700,150,0 chr2 96271558 . G C 942.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.11;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,26:26:78:971,78,0 chr2 96277735 . T C 8355.77 PASS AC=2;AF=1.00;AN=2;DP=248;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.69;SOR=0.794 GT:AD:DP:GQ:PL 1/1:0,248:248:99:8384,745,0 chr2 96287095 . A G 11196.77 PASS AC=2;AF=1.00;AN=2;DP=344;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.55;SOR=0.896 GT:AD:DP:GQ:PL 1/1:0,344:344:99:11225,1033,0 chr2 96289742 . T C 4912.77 PASS AC=2;AF=1.00;AN=2;DP=139;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.35;SOR=1.998 GT:AD:DP:GQ:PL 1/1:0,139:139:99:4941,418,0 chr2 96290251 . A G 284.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.962;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=6.410;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.56;ReadPosRankSum=0.446;SOR=2.833 GT:AD:DP:GQ:PL 0/1:12,9:21:99:313,0,426 chr2 96290577 . T G 4869.77 PASS AC=2;AF=1.00;AN=2;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.58;SOR=1.027 GT:AD:DP:GQ:PL 1/1:0,136:136:99:4898,409,0 chr2 96297121 . A G 1756.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.45;SOR=1.094 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1785,153,0 chr2 96300923 . G C 1855.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.00;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1884,174,0 chr2 96305617 . T C 605.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.54;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:634,48,0 chr2 96305671 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 96322004 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 96325560 . C T 519.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.536;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.63;ReadPosRankSum=-0.246;SOR=1.022 GT:AD:DP:GQ:PL 0/1:7,15:22:99:548,0,192 chr2 96325607 . A G 1005.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.035;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.05;ReadPosRankSum=2.365;SOR=0.660 GT:AD:DP:GQ:PL 0/1:30,29:59:99:1034,0,1017 chr2 96325754 . A G 13374.77 PASS AC=2;AF=1.00;AN=2;DP=417;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.07;SOR=1.229 GT:AD:DP:GQ:PL 1/1:0,417:417:99:13403,1252,0 chr2 96328019 . C T 8197.77 PASS AC=2;AF=1.00;AN=2;DP=258;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.77;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,258:258:99:8226,772,0 chr2 96328146 . A G 5422.77 PASS AC=2;AF=1.00;AN=2;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.19;SOR=1.157 GT:AD:DP:GQ:PL 1/1:0,154:154:99:5451,462,0 chr2 96333842 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 96354311 . T C 5658.77 PASS AC=2;AF=1.00;AN=2;DP=185;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.75;SOR=1.100 GT:AD:DP:GQ:PL 1/1:0,184:184:99:5687,552,0 chr2 96354432 . A C 1876.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.86;SOR=6.358 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1905,144,0 chr2 96356757 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 96360838 . C T 892.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.22;SOR=4.892 GT:AD:DP:GQ:PL 1/1:0,23:23:69:921,69,0 chr2 96364509 . T C 1479.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.48;SOR=1.132 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1508,141,0 chr2 96379235 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 96404611 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 96404615 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 96500467 . A G 7963.77 PASS AC=2;AF=1.00;AN=2;DP=241;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.04;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,241:241:99:7992,724,0 chr2 96536506 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 96537400 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 96537487 . T C 155.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:184,18,0 chr2 96601523 . G C 2876.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.53;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2905,234,0 chr2 96601556 . T C 3729.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.30;SOR=1.315 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3758,336,0 chr2 96601907 . G A 2484.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.40;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2513,203,0 chr2 96602860 . C T 2624.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.086;ClippingRankSum=0.000;DP=227;ExcessHet=3.0103;FS=2.270;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.56;ReadPosRankSum=-0.266;SOR=0.545 GT:AD:DP:GQ:PL 0/1:122,105:227:99:2653,0,3358 chr2 96647713 . C G 4798.77 PASS AC=2;AF=1.00;AN=2;DP=134;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.66;SOR=2.035 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4827,403,0 chr2 96657221 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 96660549 . T C 851.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.67;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,22:22:66:880,66,0 chr2 96662257 . T C 1309.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.781;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=2.580;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=-1.283;SOR=0.966 GT:AD:DP:GQ:PL 0/1:51,49:100:99:1338,0,1326 chr2 96689738 . G A 1472.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.122;ClippingRankSum=0.000;DP=143;ExcessHet=3.0103;FS=5.308;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.45;ReadPosRankSum=0.491;SOR=1.130 GT:AD:DP:GQ:PL 0/1:80,61:141:99:1501,0,2135 chr2 96741582 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 96819077 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 96844221 . G A 293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.722;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=3.274;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.28;ReadPosRankSum=-0.834;SOR=1.981 GT:AD:DP:GQ:PL 0/1:8,9:17:99:322,0,267 chr2 96863623 . T A 8221.77 PASS AC=2;AF=1.00;AN=2;DP=250;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.89;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,250:250:99:8250,748,0 chr2 96878199 . T C 758.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.05;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,20:20:60:787,60,0 chr2 96878352 . G C 2498.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=2.441;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=5.174;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=25.50;ReadPosRankSum=-1.267;SOR=2.110 GT:AD:DP:GQ:PL 1/1:4,94:98:99:2527,171,0 chr2 96892413 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 96892623 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 96894022 . G A 2946.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.176;ClippingRankSum=0.000;DP=225;ExcessHet=3.0103;FS=4.579;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=0.716;SOR=0.451 GT:AD:DP:GQ:PL 0/1:107,118:225:99:2975,0,2791 chr2 96894892 . C T 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.538;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.81;ReadPosRankSum=-0.935;SOR=1.445 GT:AD:DP:GQ:PL 0/1:6,6:12:99:182,0,166 chr2 96895176 . C T 1374.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.521;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=0.868;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.56;ReadPosRankSum=-0.573;SOR=0.855 GT:AD:DP:GQ:PL 0/1:38,45:83:99:1403,0,1121 chr2 96896298 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 96921312 . T C 656.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.869;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.946;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.38;ReadPosRankSum=-0.588;SOR=0.890 GT:AD:DP:GQ:PL 0/1:45,25:70:99:685,0,1224 chr2 96929372 . T C 2056.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.424;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=0.324;SOR=0.752 GT:AD:DP:GQ:PL 0/1:84,76:160:99:2085,0,2411 chr2 96947879 . T C 690.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.702;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.51;ReadPosRankSum=0.948;SOR=0.705 GT:AD:DP:GQ:PL 0/1:31,29:60:99:719,0,781 chr2 96948011 . C A 356.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.396;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.72;ReadPosRankSum=1.098;SOR=1.061 GT:AD:DP:GQ:PL 0/1:13,13:26:99:385,0,329 chr2 96951403 . T C 2186.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.562;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=1.877;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.50;ReadPosRankSum=0.492;SOR=0.545 GT:AD:DP:GQ:PL 0/1:87,88:175:99:2215,0,2245 chr2 96951490 . A G 1627.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.048;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.24;ReadPosRankSum=-0.169;SOR=0.684 GT:AD:DP:GQ:PL 0/1:74,59:133:99:1656,0,1980 chr2 96966145 . C T 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:31:115,0,31 chr2 96966245 . T C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=1.150;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:28:113,0,28 chr2 96967276 . A G 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.566;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr2 96968935 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 96968938 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 96971779 . T C 531.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.576;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=1.490;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.09;ReadPosRankSum=-0.265;SOR=1.167 GT:AD:DP:GQ:PL 0/1:25,19:44:99:560,0,732 chr2 96972168 . T C 899.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.918;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=1.106;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.79;ReadPosRankSum=0.358;SOR=0.467 GT:AD:DP:GQ:PL 0/1:25,32:57:99:928,0,714 chr2 96972301 . A G 755.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.736;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.111;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.53;ReadPosRankSum=-1.241;SOR=0.461 GT:AD:DP:GQ:PL 0/1:27,25:52:99:784,0,888 chr2 96977839 . T C 1485.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.926;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=0.634;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.09;ReadPosRankSum=-0.197;SOR=0.760 GT:AD:DP:GQ:PL 0/1:71,63:134:99:1514,0,1846 chr2 96999155 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 97028229 . A G 570.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.479;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.47;MQRankSum=-0.716;QD=11.19;ReadPosRankSum=-1.909;SOR=0.807 GT:AD:DP:GQ:PL 0/1:28,23:51:99:599,0,727 chr2 97029488 . A C 1625.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.83;QD=32.52;SOR=0.773 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1654,150,0 chr2 97037547 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 97046027 . A G 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.99;MQRankSum=-0.272;QD=9.10;ReadPosRankSum=-0.887;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr2 97046602 . C A 1636.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.079;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.777;MLEAC=1;MLEAF=0.500;MQ=59.75;MQRankSum=-0.792;QD=16.70;ReadPosRankSum=0.699;SOR=0.585 GT:AD:DP:GQ:PL 0/1:39,59:98:99:1665,0,1016 chr2 97046803 . A G 1338.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.045;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=0.666;MLEAC=1;MLEAF=0.500;MQ=57.65;MQRankSum=-6.341;QD=10.14;ReadPosRankSum=0.643;SOR=0.786 GT:AD:DP:GQ:PL 0/1:82,50:132:99:1367,0,2265 chr2 97046844 . A C 1085.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.729;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=2.573;MLEAC=1;MLEAF=0.500;MQ=55.15;MQRankSum=-8.539;QD=10.15;ReadPosRankSum=0.426;SOR=0.459 GT:AD:DP:GQ:PL 0/1:65,42:107:99:1114,0,2068 chr2 97046993 . G T 701.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.060;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=1.795;MLEAC=1;MLEAF=0.500;MQ=55.34;MQRankSum=-1.183;QD=17.99;ReadPosRankSum=-0.184;SOR=0.372 GT:AD:DP:GQ:PL 0/1:20,19:39:99:730,0,1415 chr2 97046994 . C T 701.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.145;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.24;MQRankSum=-1.112;QD=18.47;ReadPosRankSum=-0.287;SOR=0.588 GT:AD:DP:GQ:PL 0/1:20,18:38:99:730,0,1415 chr2 97060350 . T C 152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=49.89;MQRankSum=-2.655;QD=16.97;ReadPosRankSum=0.241;SOR=0.069 GT:AD:DP:GQ:PL 0/1:4,5:9:99:181,0,140 chr2 97082157 . T C 644.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.244;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=9.721;MLEAC=1;MLEAF=0.500;MQ=52.91;MQRankSum=-0.290;QD=12.40;ReadPosRankSum=0.458;SOR=1.220 GT:AD:DP:GQ:PL 0/1:27,25:52:99:673,0,727 chr2 97086045 . T C 370.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.628;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.670;MLEAC=1;MLEAF=0.500;MQ=53.86;MQRankSum=-4.487;QD=11.59;ReadPosRankSum=-0.810;SOR=0.277 GT:AD:DP:GQ:PL 0/1:21,11:32:99:399,0,2261 chr2 97086046 . G A 370.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.088;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.670;MLEAC=1;MLEAF=0.500;MQ=53.86;MQRankSum=-4.487;QD=11.59;ReadPosRankSum=-0.446;SOR=0.277 GT:AD:DP:GQ:PL 0/1:21,11:32:99:399,0,2261 chr2 97086049 . G A 328.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.217;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=4.262;MLEAC=1;MLEAF=0.500;MQ=54.63;MQRankSum=-4.149;QD=12.18;ReadPosRankSum=0.935;SOR=0.148 GT:AD:DP:GQ:PL 0/1:19,8:27:99:357,0,2264 chr2 97091238 . G C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.31;MQRankSum=-2.369;QD=6.35;ReadPosRankSum=-0.887;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:79:79,0,185 chr2 97091772 . C T 3165.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.099;ClippingRankSum=0.000;DP=238;ExcessHet=3.0103;FS=1.089;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.30;ReadPosRankSum=0.108;SOR=0.800 GT:AD:DP:GQ:PL 0/1:118,120:238:99:3194,0,3280 chr2 97117920 . T C 149.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.79;MQRankSum=0.464;QD=14.98;ReadPosRankSum=0.944;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:178,0,178 chr2 97127091 . C T 51.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.217;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.57;MQRankSum=-1.068;QD=7.40;ReadPosRankSum=0.180;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,3:7:80:80,0,112 chr2 97149219 . G A 482.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.612;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=4.773;MLEAC=1;MLEAF=0.500;MQ=59.18;MQRankSum=-1.749;QD=12.07;ReadPosRankSum=-1.785;SOR=0.197 GT:AD:DP:GQ:PL 0/1:20,20:40:99:511,0,545 chr2 97151656 . A T 130.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.14;MQRankSum=-1.465;QD=18.68;ReadPosRankSum=-1.068;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:159,0,173 chr2 97151657 . T G 130.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.14;MQRankSum=-1.465;QD=18.68;ReadPosRankSum=-0.842;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:159,0,173 chr2 97151683 . G A 199.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.998;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.25;MQRankSum=-2.494;QD=16.65;ReadPosRankSum=2.000;SOR=1.371 GT:AD:DP:GQ:PL 0/1:7,5:12:99:228,0,389 chr2 97151692 . A C 244.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=46.17;MQRankSum=-1.949;QD=17.48;ReadPosRankSum=0.746;SOR=0.693 GT:AD:DP:GQ:PL 0/1:7,7:14:99:273,0,347 chr2 97151712 . C T 280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.908;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.43;MQRankSum=-1.414;QD=17.55;ReadPosRankSum=-0.213;SOR=0.293 GT:AD:DP:GQ:PL 0/1:8,8:16:99:309,0,428 chr2 97151713 . C G 303.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.472;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=43.59;MQRankSum=-1.144;QD=17.87;ReadPosRankSum=-0.195;SOR=0.569 GT:AD:DP:GQ:PL 0/1:9,8:17:99:332,0,425 chr2 97151732 . T A 291.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.116;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.69;MQRankSum=-1.277;QD=13.26;ReadPosRankSum=1.123;SOR=1.022 GT:AD:DP:GQ:PL 0/1:13,9:22:99:320,0,547 chr2 97151774 . T C 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.035;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.13;MQRankSum=-0.403;QD=5.91;ReadPosRankSum=-0.763;SOR=0.892 GT:AD:DP:GQ:PL 0/1:16,8:24:99:170,0,428 chr2 97152611 . A G 500.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.718;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=2.774;MLEAC=1;MLEAF=0.500;MQ=59.81;MQRankSum=-0.827;QD=12.84;ReadPosRankSum=2.007;SOR=1.019 GT:AD:DP:GQ:PL 0/1:17,22:39:99:529,0,355 chr2 97158234 . T C 84.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.150;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.21;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:18:113,0,18 chr2 97163192 . A G 90.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.30;QD=30.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:118,9,0 chr2 97163245 . C T 212.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.32;QD=23.64;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,9:9:27:241,27,0 chr2 97163292 . G A 283.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.46;MQRankSum=-1.534;QD=21.44;ReadPosRankSum=1.534;SOR=0.595 GT:AD:DP:GQ:PL 0/1:1,7:8:18:312,0,18 chr2 97163794 . C A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:36:81,0,36 chr2 97163797 . C G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:36:81,0,36 chr2 97167398 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.01;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 97167422 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.01;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 97167456 . G A 195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.728;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=45.70;MQRankSum=-2.638;QD=19.58;ReadPosRankSum=0.431;SOR=0.569 GT:AD:DP:GQ:PL 0/1:3,7:10:95:224,0,95 chr2 97167478 . T C 408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.194;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=45.38;MQRankSum=-3.381;QD=25.55;ReadPosRankSum=1.033;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,10:16:99:437,0,216 chr2 97167480 . C T 408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.250;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=2.112;MLEAC=1;MLEAF=0.500;MQ=45.56;MQRankSum=-3.552;QD=22.71;ReadPosRankSum=0.328;SOR=0.307 GT:AD:DP:GQ:PL 0/1:6,12:18:99:437,0,216 chr2 97167605 . G A 208.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.754;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=12.225;MLEAC=1;MLEAF=0.500;MQ=43.94;MQRankSum=-3.353;QD=5.80;ReadPosRankSum=0.559;SOR=2.243 GT:AD:DP:GQ:PL 0/1:26,10:36:99:237,0,706 chr2 97167624 . A G 127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.373;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=10.212;MLEAC=1;MLEAF=0.500;MQ=43.75;MQRankSum=-3.113;QD=3.87;ReadPosRankSum=-2.757;SOR=2.565 GT:AD:DP:GQ:PL 0/1:26,7:33:99:156,0,701 chr2 97167729 . C T 55.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.497;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=13.247;MLEAC=1;MLEAF=0.500;MQ=40.35;MQRankSum=-2.421;QD=2.07;ReadPosRankSum=0.257;SOR=1.859 GT:AD:DP:GQ:PL 0/1:22,5:27:84:84,0,646 chr2 97167830 . A G 202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.232;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=7.160;MLEAC=1;MLEAF=0.500;MQ=41.05;MQRankSum=-0.350;QD=15.60;ReadPosRankSum=0.489;SOR=0.042 GT:AD:DP:GQ:PL 0/1:7,6:13:99:231,0,302 chr2 97167832 . C T 202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.308;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=7.160;MLEAC=1;MLEAF=0.500;MQ=41.05;MQRankSum=-0.350;QD=15.60;ReadPosRankSum=0.560;SOR=0.042 GT:AD:DP:GQ:PL 0/1:7,6:13:99:231,0,302 chr2 97167846 . C T 95.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.93;MQRankSum=-0.328;QD=13.68;ReadPosRankSum=0.697;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:124,0,104 chr2 97167914 . C A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 97181869 . A G 63.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.955;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=57.23;MQRankSum=-1.922;QD=5.80;ReadPosRankSum=0.660;SOR=2.093 GT:AD:DP:GQ:PL 0/1:8,3:11:92:92,0,255 chr2 97183482 . T C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=6.021;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.000;SOR=2.788 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 97185332 . A G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.418;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.39;MQRankSum=-1.518;QD=2.82;ReadPosRankSum=-1.342;SOR=0.602 GT:AD:DP:GQ:PL 0/1:14,4:18:79:79,0,370 chr2 97193082 . G A 77.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.57;MQRankSum=-0.253;QD=15.56;ReadPosRankSum=-0.253;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:106,0,27 chr2 97194750 . T C 188.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.695;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.13;MQRankSum=-0.320;QD=9.94;ReadPosRankSum=-1.864;SOR=0.941 GT:AD:DP:GQ:PL 0/1:10,9:19:99:217,0,224 chr2 97196523 . T A 107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.483;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.29;ReadPosRankSum=-0.619;SOR=0.330 GT:AD:DP:GQ:PL 0/1:8,5:13:99:136,0,260 chr2 97196659 . G A 146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.839;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.72;ReadPosRankSum=-0.521;SOR=0.631 GT:AD:DP:GQ:PL 0/1:11,8:19:99:175,0,300 chr2 97198551 . T C 286.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.453;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.93;MQRankSum=-0.639;QD=20.48;ReadPosRankSum=0.000;SOR=0.760 GT:AD:DP:GQ:PL 0/1:3,11:14:49:315,0,49 chr2 97198596 . C A 304.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.589;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.81;MQRankSum=-0.431;QD=33.86;ReadPosRankSum=-0.282;SOR=0.859 GT:AD:DP:GQ:PL 0/1:1,8:9:56:333,0,56 chr2 97198597 . C T 304.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.589;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.81;MQRankSum=-0.431;QD=33.86;ReadPosRankSum=-0.282;SOR=0.859 GT:AD:DP:GQ:PL 0/1:1,8:9:56:333,0,56 chr2 97198637 . G T 164.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.86;MQRankSum=-0.566;QD=23.54;ReadPosRankSum=0.366;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,6:7:21:193,0,21 chr2 97202133 . G C 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.97;ReadPosRankSum=-1.465;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:108,0,109 chr2 97207656 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 97207778 . C T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=54.41;MQRankSum=-1.150;QD=13.13;ReadPosRankSum=0.674;SOR=0.838 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr2 97207893 . A T 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.49;MQRankSum=-0.712;QD=4.82;ReadPosRankSum=-1.068;SOR=1.802 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,154 chr2 97211555 . C A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 97211662 . T C 98.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.186;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.17;ReadPosRankSum=1.083;SOR=0.836 GT:AD:DP:GQ:PL 0/1:11,5:16:99:127,0,241 chr2 97211703 . T C 177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.772;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.89;ReadPosRankSum=-0.333;SOR=0.446 GT:AD:DP:GQ:PL 0/1:12,8:20:99:206,0,305 chr2 97216911 . G A 183.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.97;MQRankSum=0.967;QD=20.42;ReadPosRankSum=-0.431;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:98:212,0,98 chr2 97219026 . T C 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.649;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.422;MLEAC=1;MLEAF=0.500;MQ=51.47;MQRankSum=-1.075;QD=8.06;ReadPosRankSum=-0.261;SOR=0.446 GT:AD:DP:GQ:PL 0/1:21,11:32:99:286,0,488 chr2 97706241 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 97735523 . T C 1519.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.960;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.89;ReadPosRankSum=1.465;SOR=0.524 GT:AD:DP:GQ:PL 0/1:49,41:90:99:1548,0,2191 chr2 97735532 . G C 1352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.142;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.04;ReadPosRankSum=1.198;SOR=0.612 GT:AD:DP:GQ:PL 0/1:39,36:75:99:1381,0,1881 chr2 97737384 . C T 1006.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.170;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=2.614;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.25;ReadPosRankSum=0.447;SOR=1.276 GT:AD:DP:GQ:PL 0/1:31,35:66:99:1035,0,824 chr2 97737676 . G T 5339.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.101;ClippingRankSum=0.000;DP=445;ExcessHet=3.0103;FS=2.452;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.00;ReadPosRankSum=0.686;SOR=0.648 GT:AD:DP:GQ:PL 0/1:240,205:445:99:5368,0,6571 chr2 98179565 . T A 513.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.34;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:542,39,0 chr2 98181281 . C T 2857.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.02;SOR=4.921 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2886,223,0 chr2 98187851 . G A 1726.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.86;SOR=2.348 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1755,153,0 chr2 98194612 . A G 2322.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.18;SOR=2.173 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2351,210,0 chr2 98216986 . G C 327.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.709;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=2.674;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.93;ReadPosRankSum=-1.100;SOR=1.390 GT:AD:DP:GQ:PL 0/1:20,10:30:99:356,0,1575 chr2 98217131 . C T 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr2 98228112 . A G 758.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.097;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=3.112;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.24;ReadPosRankSum=-0.327;SOR=2.468 GT:AD:DP:GQ:PL 0/1:22,22:44:99:787,0,718 chr2 98228211 . C G 1940.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.061;ClippingRankSum=0.000;DP=222;ExcessHet=3.0103;FS=0.529;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.74;ReadPosRankSum=1.320;SOR=0.764 GT:AD:DP:GQ:PL 0/1:142,80:222:99:1969,0,3682 chr2 98228455 . G A 306.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.161;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.36;ReadPosRankSum=-1.355;SOR=0.297 GT:AD:DP:GQ:PL 0/1:17,10:27:99:335,0,595 chr2 98229942 . A T 173.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.78;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:202,15,0 chr2 98236710 . G A 1488.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.174;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=2.781;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.74;ReadPosRankSum=-0.864;SOR=0.458 GT:AD:DP:GQ:PL 0/1:46,55:101:99:1517,0,1310 chr2 98236901 . C A 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.35;ReadPosRankSum=-1.645;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:99:120,0,152 chr2 98236910 . G T 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.35;ReadPosRankSum=-1.645;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:99:120,0,152 chr2 98245634 . A G 1699.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.304;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=13.166;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.16;ReadPosRankSum=0.043;SOR=1.960 GT:AD:DP:GQ:PL 0/1:63,57:120:99:1728,0,1728 chr2 98250312 . A G 1738.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.772;ClippingRankSum=0.000;DP=154;ExcessHet=3.0103;FS=1.308;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.36;ReadPosRankSum=1.717;SOR=0.813 GT:AD:DP:GQ:PL 0/1:88,65:153:99:1767,0,2323 chr2 98255331 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 98256147 . G A 633.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.321;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=4.503;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.68;ReadPosRankSum=-1.052;SOR=1.557 GT:AD:DP:GQ:PL 0/1:27,23:50:99:662,0,627 chr2 98270653 . G C 588.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.620;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=3.615;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.80;ReadPosRankSum=2.000;SOR=1.697 GT:AD:DP:GQ:PL 0/1:26,20:46:99:617,0,781 chr2 98300019 . A T 1013.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.338;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=5.406;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.26;ReadPosRankSum=-0.551;SOR=0.279 GT:AD:DP:GQ:PL 0/1:53,37:90:99:1042,0,1644 chr2 98305192 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 98311622 . C T 680.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.31;ReadPosRankSum=-0.027;SOR=1.609 GT:AD:DP:GQ:PL 0/1:9,19:28:99:709,0,288 chr2 98312031 . G A 5818.77 PASS AC=2;AF=1.00;AN=2;DP=168;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.64;SOR=1.554 GT:AD:DP:GQ:PL 1/1:0,168:168:99:5847,503,0 chr2 98312466 . A G 320.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.085;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=2.049;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.46;ReadPosRankSum=-0.437;SOR=0.223 GT:AD:DP:GQ:PL 0/1:16,12:28:99:349,0,488 chr2 98331761 . C A 2305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.879;ClippingRankSum=0.000;DP=187;ExcessHet=3.0103;FS=0.566;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.40;ReadPosRankSum=0.185;SOR=0.768 GT:AD:DP:GQ:PL 0/1:106,80:186:99:2334,0,3020 chr2 98377951 . T C 1828.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.310;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=4.749;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.55;ReadPosRankSum=-1.602;SOR=1.353 GT:AD:DP:GQ:PL 0/1:33,56:89:99:1857,0,975 chr2 98378510 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 98380522 . A T 257.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.49;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:286,21,0 chr2 98381219 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 98385985 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 98389138 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 98552490 . T C 513.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.95;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:542,39,0 chr2 98616410 . T C 1544.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.696;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=1.458;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=-1.431;SOR=0.559 GT:AD:DP:GQ:PL 0/1:56,62:118:99:1573,0,1542 chr2 98658190 . T C 468.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.015;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-1.225;SOR=0.709 GT:AD:DP:GQ:PL 0/1:23,19:42:99:497,0,630 chr2 98868958 . C T 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.809;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=9.108;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.30;ReadPosRankSum=1.514;SOR=0.023 GT:AD:DP:GQ:PL 0/1:12,7:19:99:167,0,444 chr2 98869956 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 98869971 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 98894471 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 98894832 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 98920611 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 99078634 . A G 981.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.985;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=3.554;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=-0.223;SOR=1.219 GT:AD:DP:GQ:PL 0/1:46,36:82:99:1010,0,1274 chr2 99102767 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 99108760 . A G 213.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.548;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.88;ReadPosRankSum=-1.123;SOR=0.124 GT:AD:DP:GQ:PL 0/1:10,8:18:99:242,0,356 chr2 99109112 . T C 155.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.47;ReadPosRankSum=-0.272;SOR=1.329 GT:AD:DP:GQ:PL 0/1:3,5:8:99:184,0,101 chr2 99109580 . A G 852.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.16;SOR=4.003 GT:AD:DP:GQ:PL 1/1:0,23:23:69:881,69,0 chr2 99126956 . G A 235.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.348;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=2.021;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.07;ReadPosRankSum=1.587;SOR=1.276 GT:AD:DP:GQ:PL 0/1:17,9:26:99:264,0,552 chr2 99154805 . G C 517.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.769;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=1.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.49;ReadPosRankSum=0.724;SOR=1.445 GT:AD:DP:GQ:PL 0/1:14,14:28:99:546,0,768 chr2 99154809 . C T 517.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.769;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=1.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.49;ReadPosRankSum=0.861;SOR=1.445 GT:AD:DP:GQ:PL 0/1:14,14:28:99:546,0,768 chr2 99155070 . C T 1161.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.112;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.14;ReadPosRankSum=0.719;SOR=0.775 GT:AD:DP:GQ:PL 0/1:31,41:72:99:1190,0,840 chr2 99155127 . G T 925.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.985;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=2.130;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.69;ReadPosRankSum=0.879;SOR=0.456 GT:AD:DP:GQ:PL 0/1:25,38:63:99:954,0,617 chr2 99162522 . T C 1527.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.239;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=3.106;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.32;ReadPosRankSum=2.841;SOR=0.733 GT:AD:DP:GQ:PL 0/1:77,58:135:99:1556,0,2219 chr2 99162668 . T C 865.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.882;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=1.718;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.57;ReadPosRankSum=0.906;SOR=0.922 GT:AD:DP:GQ:PL 0/1:65,36:101:99:894,0,1940 chr2 99186357 . A G 254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=-0.393;SOR=0.593 GT:AD:DP:GQ:PL 0/1:9,8:17:99:283,0,325 chr2 99187535 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 99187544 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 99188179 . T C 784.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.03;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,28:28:84:813,84,0 chr2 99195431 . C T 904.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.689;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=16.170;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.77;ReadPosRankSum=-0.969;SOR=2.770 GT:AD:DP:GQ:PL 0/1:54,30:84:99:933,0,1502 chr2 99195607 . G A 1786.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.942;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=3.758;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.10;ReadPosRankSum=-2.045;SOR=1.025 GT:AD:DP:GQ:PL 0/1:87,74:161:99:1815,0,2129 chr2 99243400 . G A 309.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.768;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.32;ReadPosRankSum=-0.168;SOR=0.602 GT:AD:DP:GQ:PL 0/1:34,15:49:99:338,0,1034 chr2 99245067 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr2 99271994 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 99284237 . A C 990.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.607;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=9.976;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.39;ReadPosRankSum=-1.175;SOR=2.326 GT:AD:DP:GQ:PL 0/1:42,32:74:99:1019,0,1183 chr2 99301614 . A G 337.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.83;QD=28.93;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:366,27,0 chr2 99301981 . T G 248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.69;MQRankSum=-1.629;QD=13.09;ReadPosRankSum=1.251;SOR=1.302 GT:AD:DP:GQ:PL 0/1:11,8:19:99:277,0,394 chr2 99306504 . C T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.10;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 99306625 . T C 1630.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.33;QD=26.68;SOR=3.516 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1659,135,0 chr2 99321838 . C T 305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.45;MQRankSum=-1.860;QD=21.84;ReadPosRankSum=-0.284;SOR=1.329 GT:AD:DP:GQ:PL 0/1:5,9:14:99:334,0,167 chr2 99322479 . A G 502.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.071;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=1.762;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=-0.600;SOR=1.241 GT:AD:DP:GQ:PL 0/1:20,17:37:99:531,0,587 chr2 99322568 . A G 961.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.037;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=3.226;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.00;ReadPosRankSum=0.516;SOR=1.182 GT:AD:DP:GQ:PL 0/1:36,38:74:99:990,0,996 chr2 99332129 . G A 31.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0 chr2 99338145 . A G 797.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.398;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.77;ReadPosRankSum=-0.347;SOR=0.784 GT:AD:DP:GQ:PL 0/1:26,28:54:99:826,0,751 chr2 99338272 . C A 1942.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.464;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.87;ReadPosRankSum=0.062;SOR=0.716 GT:AD:DP:GQ:PL 0/1:75,76:151:99:1971,0,2086 chr2 99351068 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 99352128 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 99360101 . A G 220.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.19;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:249,18,0 chr2 99376359 . A C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 99379054 . C T 603.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.035;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.08;ReadPosRankSum=-0.960;SOR=0.850 GT:AD:DP:GQ:PL 0/1:28,22:50:99:632,0,849 chr2 99379341 . T C 1422.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.425;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=6.514;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=1.113;SOR=0.621 GT:AD:DP:GQ:PL 0/1:73,58:131:99:1451,0,1759 chr2 99382098 . C T 365.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.249;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=3.132;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.90;ReadPosRankSum=0.601;SOR=0.124 GT:AD:DP:GQ:PL 0/1:10,13:23:99:394,0,317 chr2 99390157 . G T 502.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.089;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=4.746;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.24;ReadPosRankSum=0.335;SOR=0.116 GT:AD:DP:GQ:PL 0/1:16,17:33:99:531,0,535 chr2 99403033 . A G 851.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.109;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=1.207;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.70;ReadPosRankSum=-1.270;SOR=0.984 GT:AD:DP:GQ:PL 0/1:23,28:51:99:880,0,637 chr2 99404279 . G A 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.63;ReadPosRankSum=0.967;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,4:6:66:98,0,66 chr2 99404482 . C T 1158.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.926;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=6.745;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.04;ReadPosRankSum=0.254;SOR=1.399 GT:AD:DP:GQ:PL 0/1:59,46:105:99:1187,0,1536 chr2 99404721 . A G 1238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.647;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=1.736;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.03;ReadPosRankSum=-1.708;SOR=0.470 GT:AD:DP:GQ:PL 0/1:53,50:103:99:1267,0,1410 chr2 99405808 . G A 406.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.102;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.33;ReadPosRankSum=1.354;SOR=0.713 GT:AD:DP:GQ:PL 0/1:19,14:33:99:435,0,626 chr2 99406310 . T C 1117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.974;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.960;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.02;ReadPosRankSum=1.172;SOR=0.539 GT:AD:DP:GQ:PL 0/1:54,39:93:99:1146,0,1581 chr2 99412644 . T C 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-0.366;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr2 99415089 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 99439044 . A G 1804.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.743;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=2.255;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.32;ReadPosRankSum=0.395;SOR=0.512 GT:AD:DP:GQ:PL 0/1:59,67:126:99:1833,0,1635 chr2 99442408 . C T 1547.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.925;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=2.135;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.22;ReadPosRankSum=1.007;SOR=0.893 GT:AD:DP:GQ:PL 0/1:73,65:138:99:1576,0,1905 chr2 99447802 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.39;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 99447821 . C A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.15;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 99451607 . T C 267.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.411;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.85;ReadPosRankSum=-0.367;SOR=1.179 GT:AD:DP:GQ:PL 0/1:6,9:15:99:296,0,171 chr2 99464861 . C T 569.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.033;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=1.854;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.38;ReadPosRankSum=-0.532;SOR=1.358 GT:AD:DP:GQ:PL 0/1:12,19:31:99:598,0,306 chr2 99516680 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 99554920 . G A 601.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.564;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.742;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.37;ReadPosRankSum=-0.696;SOR=1.258 GT:AD:DP:GQ:PL 0/1:24,21:45:99:630,0,719 chr2 99578694 . T C 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=1.383;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 99581176 . C G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.524;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 99592071 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 99668466 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 99672469 . G A 2623.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.61;SOR=0.928 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2652,249,0 chr2 99692238 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 99743888 . T C 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.501;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=-0.084;SOR=2.584 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,103 chr2 99786892 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 99822809 . G A 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr2 99837623 . T A 1459.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.44;SOR=1.714 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1488,135,0 chr2 99866472 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 99866558 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 100083532 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 100095884 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.80;MQRankSum=0.842;QD=9.55;ReadPosRankSum=0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 100133282 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 100142247 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 100143710 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 100197037 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 100197625 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 100270498 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 100279914 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 100279953 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 100286546 . C G 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr2 100290116 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 100294116 . C T 1398.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.755;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=7.443;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.04;ReadPosRankSum=0.617;SOR=1.511 GT:AD:DP:GQ:PL 0/1:44,49:93:99:1427,0,1116 chr2 100299167 . T C 2185.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.14;SOR=0.949 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2214,204,0 chr2 100299310 . A G 1793.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=1.238 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1822,171,0 chr2 100299589 . T C 669.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.89;SOR=2.636 GT:AD:DP:GQ:PL 1/1:0,21:21:62:698,62,0 chr2 100299844 . A G 2852.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.63;SOR=1.739 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2881,222,0 chr2 100299853 . A G 1101.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.493;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=3.802;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.74;ReadPosRankSum=0.663;SOR=1.338 GT:AD:DP:GQ:PL 0/1:30,40:70:99:1130,0,770 chr2 100300647 . C T 2824.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.10;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2853,264,0 chr2 100308878 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 100308937 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.27;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 100308977 . G A 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.86;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 100309341 . A G 676.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.52;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:705,54,0 chr2 100321764 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 100321779 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 100322019 . C G 393.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.25;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:45:422,45,0 chr2 100337655 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 100337729 . C A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 100337808 . G A 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr2 100363875 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 100370502 . A C 1813.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.39;SOR=1.781 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1842,168,0 chr2 100389384 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 100392864 . T C 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr2 100393138 . G A 814.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.93;SOR=3.160 GT:AD:DP:GQ:PL 1/1:0,21:21:63:843,63,0 chr2 100393620 . G C 9436.77 PASS AC=2;AF=1.00;AN=2;DP=288;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.77;SOR=1.027 GT:AD:DP:GQ:PL 1/1:0,288:288:99:9465,864,0 chr2 100393897 . C T 418.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.290;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.21;ReadPosRankSum=0.527;SOR=0.368 GT:AD:DP:GQ:PL 0/1:9,14:23:99:447,0,268 chr2 100394398 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 100395262 . C T 1392.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.39;SOR=1.455 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1421,129,0 chr2 100395415 . T C 2987.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.74;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,86:86:99:3016,258,0 chr2 100397785 . C A 1325.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.92;SOR=7.054 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1354,99,0 chr2 100397901 . C T 5841.77 PASS AC=2;AF=1.00;AN=2;DP=164;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=38.74;SOR=2.217 GT:AD:DP:GQ:PL 1/1:0,164:164:99:5870,493,0 chr2 100406424 . C T 346.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.82;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:375,27,0 chr2 100415099 . G T 1270.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.19;SOR=1.949 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1299,108,0 chr2 100417235 . G A 273.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.22;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:302,24,0 chr2 100425660 . T G 221.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.81;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:250,18,0 chr2 100449589 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 100470337 . T C 723.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.63;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:752,54,0 chr2 100470432 . G A 3191.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.86;SOR=2.435 GT:AD:DP:GQ:PL 1/1:0,91:91:99:3220,273,0 chr2 100470504 . C T 5754.77 PASS AC=2;AF=1.00;AN=2;DP=174;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.07;SOR=1.225 GT:AD:DP:GQ:PL 1/1:0,174:174:99:5783,523,0 chr2 100470642 . C T 5412.77 PASS AC=2;AF=1.00;AN=2;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.62;SOR=1.334 GT:AD:DP:GQ:PL 1/1:0,161:161:99:5441,483,0 chr2 100470729 . G C 3177.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=1.890 GT:AD:DP:GQ:PL 1/1:0,89:89:99:3206,267,0 chr2 100470833 . T C 1295.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.88;SOR=2.694 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1324,93,0 chr2 100470841 . A G 1175.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,26:26:81:1204,81,0 chr2 100470873 . C A 681.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.49;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:710,51,0 chr2 100470979 . A C 138.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:166,12,0 chr2 100477094 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 100479271 . A G 2382.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.04;SOR=1.712 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2411,209,0 chr2 100480340 . A G 3720.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.52;SOR=1.928 GT:AD:DP:GQ:PL 1/1:0,111:111:99:3749,333,0 chr2 100480372 . C A 4728.77 PASS AC=2;AF=1.00;AN=2;DP=148;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.17;SOR=1.052 GT:AD:DP:GQ:PL 1/1:0,147:147:99:4757,441,0 chr2 100480398 . T C 5489.77 PASS AC=2;AF=1.00;AN=2;DP=165;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.47;SOR=0.821 GT:AD:DP:GQ:PL 1/1:0,164:164:99:5518,493,0 chr2 100480441 . T C 5835.77 PASS AC=2;AF=1.00;AN=2;DP=180;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=0.822 GT:AD:DP:GQ:PL 1/1:0,179:179:99:5864,537,0 chr2 100480498 . C T 4645.77 PASS AC=2;AF=1.00;AN=2;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.49;SOR=1.345 GT:AD:DP:GQ:PL 1/1:0,143:143:99:4674,429,0 chr2 100509098 . C T 1123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.574;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.73;ReadPosRankSum=-0.187;SOR=0.298 GT:AD:DP:GQ:PL 0/1:27,33:60:99:1152,0,943 chr2 100509662 . T A 4751.77 PASS AC=2;AF=1.00;AN=2;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.88;SOR=3.460 GT:AD:DP:GQ:PL 1/1:0,129:129:99:4780,387,0 chr2 100536858 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 100536984 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.63;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 100536988 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.05;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 100540925 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 100562660 . T G 220.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.98;ReadPosRankSum=-0.165;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,7:13:99:249,0,231 chr2 100562665 . C T 182.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.06;ReadPosRankSum=0.165;SOR=0.569 GT:AD:DP:GQ:PL 0/1:7,6:13:99:211,0,276 chr2 100562879 . A G 4074.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.59;SOR=0.751 GT:AD:DP:GQ:PL 1/1:0,105:105:99:4103,316,0 chr2 100562880 . G A 1510.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.387;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=1.567;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=0.734;SOR=0.592 GT:AD:DP:GQ:PL 0/1:50,55:105:99:1539,0,1335 chr2 100568727 . T G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 100569626 . C T 1192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.302;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=0.766;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=-0.421;SOR=0.785 GT:AD:DP:GQ:PL 0/1:59,40:99:99:1221,0,1724 chr2 100572540 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 100578942 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 100578951 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 100581737 . C A 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.84;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr2 100581759 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 100591435 . G A 278.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.821;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=1.669;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.20;ReadPosRankSum=-1.082;SOR=1.188 GT:AD:DP:GQ:PL 0/1:22,12:34:99:307,0,597 chr2 100611883 . G T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 100633778 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 100663975 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 100702249 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 100702257 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 100714365 . C A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:56:78,0,56 chr2 100714372 . G T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:56:78,0,56 chr2 100763431 . T C 94.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0 chr2 100770046 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.12;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 100770047 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 100770086 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 100796855 . G T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 100796856 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.04;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 100814017 . C A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 100821099 . G A 1955.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.968;ClippingRankSum=0.000;DP=169;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.57;ReadPosRankSum=-0.411;SOR=0.672 GT:AD:DP:GQ:PL 0/1:91,78:169:99:1984,0,2289 chr2 100821139 . C G 1892.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.361;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=4.514;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=0.185;SOR=1.031 GT:AD:DP:GQ:PL 0/1:86,80:166:99:1921,0,2063 chr2 100821300 . A G 311.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.226;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.93;ReadPosRankSum=-1.352;SOR=0.512 GT:AD:DP:GQ:PL 0/1:32,13:45:99:340,0,914 chr2 100910829 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 100921087 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 100921088 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 100925336 . C T 1764.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.30;SOR=1.287 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1793,159,0 chr2 100948166 . A G 962.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.951;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=1.024;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.56;ReadPosRankSum=0.090;SOR=0.542 GT:AD:DP:GQ:PL 0/1:34,37:71:99:991,0,956 chr2 100949608 . C T 3010.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.03;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,94:94:99:3039,282,0 chr2 100949722 . A G 677.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.52;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,18:18:54:706,54,0 chr2 100949772 . A G 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.524;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr2 100950717 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 100951812 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 100951818 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 100955066 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 100963871 . G A 123.90 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.78;ReadPosRankSum=-1.282;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:15:152,0,15 chr2 100964784 . C T 2294.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=1.478 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2323,206,0 chr2 100965046 . A G 570.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.721;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=2.419;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.98;ReadPosRankSum=0.959;SOR=1.145 GT:AD:DP:GQ:PL 0/1:29,23:52:99:599,0,741 chr2 100965484 . C T 823.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.668;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.50;ReadPosRankSum=-0.719;SOR=0.533 GT:AD:DP:GQ:PL 0/1:33,28:61:99:852,0,1025 chr2 100965514 . A G 3582.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.48;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,96:96:99:3611,289,0 chr2 100968433 . C T 1916.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.489;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=0.853;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.69;ReadPosRankSum=0.592;SOR=0.824 GT:AD:DP:GQ:PL 0/1:75,65:140:99:1945,0,2252 chr2 100968489 . A G 916.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.647;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.63;ReadPosRankSum=0.393;SOR=0.866 GT:AD:DP:GQ:PL 0/1:24,28:52:99:945,0,811 chr2 100971180 . A T 1176.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.369;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=0.866;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.13;ReadPosRankSum=-0.845;SOR=0.855 GT:AD:DP:GQ:PL 0/1:53,44:97:99:1205,0,1472 chr2 100974842 . A G 8432.77 PASS AC=2;AF=1.00;AN=2;DP=270;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.35;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,269:269:99:8461,806,0 chr2 100974981 . A C 1908.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.176;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.81;ReadPosRankSum=-1.529;SOR=0.639 GT:AD:DP:GQ:PL 0/1:76,73:149:99:1937,0,2056 chr2 100978068 . T G 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=-1.282;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:104,0,68 chr2 100982032 . T C 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.66;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 100982609 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 100990049 . A G 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=0.040;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,139 chr2 100990925 . G A 1202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.885;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=7.460;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.48;ReadPosRankSum=-1.299;SOR=0.184 GT:AD:DP:GQ:PL 0/1:29,44:73:99:1231,0,856 chr2 100993365 . C T 1913.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.373;ClippingRankSum=0.000;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.43;ReadPosRankSum=3.059;SOR=0.688 GT:AD:DP:GQ:PL 0/1:81,73:154:99:1942,0,2174 chr2 100996106 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 100996153 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 101002821 . C G 1854.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.450;ClippingRankSum=0.000;DP=177;ExcessHet=3.0103;FS=5.368;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.48;ReadPosRankSum=0.621;SOR=0.952 GT:AD:DP:GQ:PL 0/1:103,74:177:99:1883,0,2646 chr2 101002859 . T C 2039.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.232;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=1.169;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.09;ReadPosRankSum=-1.350;SOR=0.600 GT:AD:DP:GQ:PL 0/1:101,83:184:99:2068,0,2692 chr2 101006266 . C T 1271.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.340;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.17;ReadPosRankSum=-1.070;SOR=0.690 GT:AD:DP:GQ:PL 0/1:75,50:125:99:1300,0,1993 chr2 101008009 . T C 1905.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.161;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=10.018;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.96;ReadPosRankSum=-1.095;SOR=0.982 GT:AD:DP:GQ:PL 0/1:74,73:147:99:1934,0,1960 chr2 101019076 . C T 924.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.410;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=12.243;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.94;ReadPosRankSum=-0.149;SOR=2.165 GT:AD:DP:GQ:PL 0/1:26,32:58:99:953,0,661 chr2 101022426 . A G 3310.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.799;ClippingRankSum=0.000;DP=297;ExcessHet=3.0103;FS=0.892;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.19;ReadPosRankSum=-1.062;SOR=0.767 GT:AD:DP:GQ:PL 0/1:163,133:296:99:3339,0,4121 chr2 101028393 . G A 2238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.961;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=0.662;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.03;ReadPosRankSum=-1.639;SOR=0.762 GT:AD:DP:GQ:PL 0/1:71,78:149:99:2267,0,1892 chr2 101029897 . G C 1531.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.276;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.59;ReadPosRankSum=-0.682;SOR=0.653 GT:AD:DP:GQ:PL 0/1:51,54:105:99:1560,0,1476 chr2 101033521 . G T 3295.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.086;ClippingRankSum=0.000;DP=225;ExcessHet=3.0103;FS=0.490;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.65;ReadPosRankSum=0.839;SOR=0.735 GT:AD:DP:GQ:PL 0/1:101,124:225:99:3324,0,2674 chr2 101036270 . C T 591.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.060;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.628;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.33;ReadPosRankSum=0.452;SOR=0.337 GT:AD:DP:GQ:PL 0/1:26,22:48:99:620,0,835 chr2 101036335 . T C 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.605;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=0.494;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,186 chr2 101040264 . T C 5346.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.097;ClippingRankSum=0.000;DP=388;ExcessHet=3.0103;FS=1.191;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.82;ReadPosRankSum=-0.581;SOR=0.624 GT:AD:DP:GQ:PL 0/1:194,193:387:99:5375,0,5206 chr2 101047475 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 101054475 . C T 491.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.058;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=2.917;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.49;ReadPosRankSum=1.302;SOR=0.197 GT:AD:DP:GQ:PL 0/1:9,15:24:99:520,0,304 chr2 101054493 . C T 461.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.423;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.99;ReadPosRankSum=-0.491;SOR=0.293 GT:AD:DP:GQ:PL 0/1:7,15:22:99:490,0,221 chr2 101059346 . A G 364.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.087;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.90;ReadPosRankSum=0.599;SOR=0.596 GT:AD:DP:GQ:PL 0/1:27,14:41:99:393,0,868 chr2 101061708 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr2 101116436 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 101253126 . G T 1921.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.186;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=1.498;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.56;ReadPosRankSum=0.899;SOR=0.556 GT:AD:DP:GQ:PL 0/1:63,69:132:99:1950,0,1862 chr2 101253611 . T C 823.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.787;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.50;ReadPosRankSum=-0.131;SOR=0.655 GT:AD:DP:GQ:PL 0/1:31,30:61:99:852,0,941 chr2 101257980 . C T 1885.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.625;ClippingRankSum=0.000;DP=178;ExcessHet=3.0103;FS=1.952;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.59;ReadPosRankSum=-0.736;SOR=0.852 GT:AD:DP:GQ:PL 0/1:103,75:178:99:1914,0,2722 chr2 101265087 . A T 617.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.103;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=3.120;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.23;ReadPosRankSum=1.735;SOR=0.326 GT:AD:DP:GQ:PL 0/1:25,30:55:99:646,0,763 chr2 101266565 . T C 226.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.34;ReadPosRankSum=-1.103;SOR=0.283 GT:AD:DP:GQ:PL 0/1:13,7:20:99:255,0,992 chr2 101266584 . A G 277.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.932;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.11;ReadPosRankSum=-0.855;SOR=0.593 GT:AD:DP:GQ:PL 0/1:16,9:25:99:306,0,1068 chr2 101272844 . A G 571.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.369;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=2.722;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.17;ReadPosRankSum=-0.434;SOR=0.357 GT:AD:DP:GQ:PL 0/1:24,23:47:99:600,0,725 chr2 101281950 . G C 2538.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.97;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2567,231,0 chr2 101294923 . A G 928.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.042;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.23;ReadPosRankSum=-1.086;SOR=0.765 GT:AD:DP:GQ:PL 0/1:28,33:61:99:957,0,782 chr2 101305708 . T G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.74;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 101305725 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.63;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 101308564 . T C 2500.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.967;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=3.688;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=-0.560;SOR=0.988 GT:AD:DP:GQ:PL 0/1:98,86:184:99:2529,0,2509 chr2 101350884 . C T 2819.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.39;SOR=2.419 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2848,246,0 chr2 101355156 . T C 574.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.719;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.13;ReadPosRankSum=0.677;SOR=0.593 GT:AD:DP:GQ:PL 0/1:20,18:38:99:603,0,709 chr2 101355565 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 101355568 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 101375643 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 101381193 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 101383748 . G A 1474.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.982;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.935;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.86;ReadPosRankSum=-0.611;SOR=0.551 GT:AD:DP:GQ:PL 0/1:43,50:93:99:1503,0,1314 chr2 101387500 . T C 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=-0.998;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:256,0,173 chr2 101402416 . G A 2095.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.931;ClippingRankSum=0.000;DP=164;ExcessHet=3.0103;FS=2.798;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.78;ReadPosRankSum=-1.011;SOR=0.933 GT:AD:DP:GQ:PL 0/1:89,75:164:99:2124,0,2513 chr2 101402446 . A G 2942.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.941;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=6.466;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.44;ReadPosRankSum=-0.883;SOR=0.387 GT:AD:DP:GQ:PL 0/1:78,101:179:99:2971,0,2083 chr2 101407418 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 101412811 . T C 432.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.158;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.43;ReadPosRankSum=0.587;SOR=0.929 GT:AD:DP:GQ:PL 0/1:16,14:30:99:461,0,478 chr2 101413086 . G A 1027.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.319;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=2.207;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.27;ReadPosRankSum=-0.218;SOR=1.078 GT:AD:DP:GQ:PL 0/1:35,37:72:99:1056,0,951 chr2 101413277 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 101414714 . A G 2112.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.85;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,54:54:99:2141,162,0 chr2 101415027 . C G 2152.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.64;SOR=2.376 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2181,192,0 chr2 101417405 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.16;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 101418730 . C T 4772.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.59;SOR=1.263 GT:AD:DP:GQ:PL 1/1:0,138:138:99:4801,415,0 chr2 101419298 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 101422387 . T A 7032.77 PASS AC=2;AF=1.00;AN=2;DP=237;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.67;SOR=0.702 GT:AD:DP:GQ:PL 1/1:0,237:237:99:7061,710,0 chr2 101422669 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 101428866 . C T 244.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.260;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.24;ReadPosRankSum=0.523;SOR=1.179 GT:AD:DP:GQ:PL 0/1:12,8:20:99:273,0,406 chr2 101429247 . C T 418.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.18;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:447,33,0 chr2 101431158 . A G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.12;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 101432520 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 101432601 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 101450416 . A T 377.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.46;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:406,30,0 chr2 101450621 . T C 1564.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.09;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1593,156,0 chr2 101452253 . C G 138.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.13;ReadPosRankSum=-0.210;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:167,0,24 chr2 101452410 . T A 529.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.048;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.58;ReadPosRankSum=0.317;SOR=0.648 GT:AD:DP:GQ:PL 0/1:16,18:34:99:558,0,396 chr2 101452540 . T C 421.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.133;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.17;ReadPosRankSum=1.534;SOR=0.776 GT:AD:DP:GQ:PL 0/1:8,14:22:99:450,0,233 chr2 101452613 . T C 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=0.000;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr2 101466721 . T C 338.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.540;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=1.662;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.41;ReadPosRankSum=0.453;SOR=1.230 GT:AD:DP:GQ:PL 0/1:23,13:36:99:367,0,624 chr2 101466931 . T C 1120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.427;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=1.689;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.18;ReadPosRankSum=-0.965;SOR=0.902 GT:AD:DP:GQ:PL 0/1:48,44:92:99:1149,0,1398 chr2 101502250 . T C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 101578630 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.11;ReadPosRankSum=0.566;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,4:7:70:78,0,70 chr2 101626993 . G C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 101630655 . G A 96.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:125,15,0 chr2 101637999 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 101638056 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 101638111 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 101638161 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 101646163 . T A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 101697147 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 101697975 . T C 2169.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.92;SOR=4.332 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2198,168,0 chr2 101717984 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 101824261 . G A 293.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:30:322,30,0 chr2 101827277 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 101829265 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 101834257 . G A 222.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=3.358;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.91;ReadPosRankSum=-0.746;SOR=2.833 GT:AD:DP:GQ:PL 0/1:7,7:14:99:251,0,218 chr2 101949110 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 101994180 . C A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 101994259 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 102016120 . T A 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.216;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=3.010;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.47;ReadPosRankSum=-1.069;SOR=0.148 GT:AD:DP:GQ:PL 0/1:15,6:21:99:185,0,517 chr2 102024739 . A G 1688.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.321;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=2.386;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.26;ReadPosRankSum=0.652;SOR=0.976 GT:AD:DP:GQ:PL 0/1:88,62:150:99:1717,0,2585 chr2 102049832 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 102074118 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 102100131 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 102142833 . A C 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr2 102142921 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 102154613 . C T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 102157594 . G A 1193.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.915;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.74;ReadPosRankSum=0.497;SOR=0.729 GT:AD:DP:GQ:PL 0/1:34,47:81:99:1222,0,878 chr2 102165973 . T A 886.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.879;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=1.214;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.12;ReadPosRankSum=0.323;SOR=0.955 GT:AD:DP:GQ:PL 0/1:23,32:55:99:915,0,653 chr2 102168698 . G T 547.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.018;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=9.488;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.12;ReadPosRankSum=-1.380;SOR=1.702 GT:AD:DP:GQ:PL 0/1:69,38:107:99:585,0,1574 chr2 102171665 . G T 239.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.081;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.32;ReadPosRankSum=-0.807;SOR=0.512 GT:AD:DP:GQ:PL 0/1:10,8:18:99:268,0,351 chr2 102171949 . G A 3857.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.97;SOR=1.777 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3886,349,0 chr2 102176300 . A G 380.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.032;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.04;ReadPosRankSum=1.128;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,12:19:99:409,0,234 chr2 102177073 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 102192223 . G A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 102201373 . A G 215.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.98;ReadPosRankSum=1.534;SOR=2.833 GT:AD:DP:GQ:PL 0/1:1,7:8:18:244,0,18 chr2 102201494 . A T 1333.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.020;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=1.256;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.52;ReadPosRankSum=-0.380;SOR=1.022 GT:AD:DP:GQ:PL 0/1:22,43:65:99:1362,0,549 chr2 102206046 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 102206068 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 102207026 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 102207038 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 102212308 . G C 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.536;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.41;ReadPosRankSum=-0.856;SOR=0.976 GT:AD:DP:GQ:PL 0/1:8,6:14:99:174,0,224 chr2 102212357 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 102219246 . T C 232.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.797;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=5.738;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.03;ReadPosRankSum=-0.796;SOR=0.095 GT:AD:DP:GQ:PL 0/1:19,10:29:99:261,0,672 chr2 102220205 . A T 160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.722;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.46;ReadPosRankSum=0.256;SOR=0.293 GT:AD:DP:GQ:PL 0/1:12,7:19:99:189,0,393 chr2 102226007 . T C 1502.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.153;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=1.337;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.66;ReadPosRankSum=0.747;SOR=0.859 GT:AD:DP:GQ:PL 0/1:73,68:141:99:1531,0,1689 chr2 102234783 . C T 337.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.87;ReadPosRankSum=-0.810;SOR=1.061 GT:AD:DP:GQ:PL 0/1:7,10:17:99:366,0,241 chr2 102235248 . T C 1475.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.150;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=3.931;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.71;ReadPosRankSum=-2.030;SOR=0.362 GT:AD:DP:GQ:PL 0/1:71,55:126:99:1504,0,2067 chr2 102257253 . G A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 102341256 . C T 515.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.352;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=2.772;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.99;ReadPosRankSum=-0.818;SOR=1.344 GT:AD:DP:GQ:PL 0/1:23,20:43:99:544,0,466 chr2 102343547 . G A 415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.460;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.693;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.88;ReadPosRankSum=1.623;SOR=0.318 GT:AD:DP:GQ:PL 0/1:19,16:35:99:444,0,582 chr2 102350970 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 102350971 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 102351384 . C A 384.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.65;ReadPosRankSum=-1.240;SOR=1.911 GT:AD:DP:GQ:PL 0/1:4,11:15:99:413,0,122 chr2 102351397 . C T 271.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=-1.066;SOR=0.392 GT:AD:DP:GQ:PL 0/1:12,8:20:99:300,0,480 chr2 102351398 . T C 271.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=-1.066;SOR=0.392 GT:AD:DP:GQ:PL 0/1:12,8:20:99:300,0,480 chr2 102351468 . A G 894.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.604;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=1.404;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.91;ReadPosRankSum=0.642;SOR=0.413 GT:AD:DP:GQ:PL 0/1:51,31:82:99:923,0,1602 chr2 102351547 . G A 2941.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.013;ClippingRankSum=0.000;DP=211;ExcessHet=3.0103;FS=0.544;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.94;ReadPosRankSum=0.395;SOR=0.764 GT:AD:DP:GQ:PL 0/1:103,108:211:99:2970,0,2797 chr2 102351615 . T C 4973.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.438;ClippingRankSum=0.000;DP=337;ExcessHet=3.0103;FS=2.954;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.76;ReadPosRankSum=0.321;SOR=0.876 GT:AD:DP:GQ:PL 0/1:151,186:337:99:5002,0,4249 chr2 102351751 . C A 5383.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.553;ClippingRankSum=0.000;DP=282;ExcessHet=3.0103;FS=2.067;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.16;ReadPosRankSum=-0.239;SOR=0.851 GT:AD:DP:GQ:PL 0/1:142,139:281:99:5412,0,5550 chr2 102351752 . A G 5383.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.175;ClippingRankSum=0.000;DP=284;ExcessHet=3.0103;FS=2.050;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.02;ReadPosRankSum=-0.020;SOR=0.825 GT:AD:DP:GQ:PL 0/1:144,139:283:99:5412,0,5550 chr2 102351825 . T C 2369.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.154;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=1.435;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.54;ReadPosRankSum=-0.022;SOR=0.560 GT:AD:DP:GQ:PL 0/1:82,81:163:99:2398,0,2416 chr2 102351896 . C T 1232.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.475;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.40;ReadPosRankSum=0.293;SOR=0.800 GT:AD:DP:GQ:PL 0/1:32,35:67:99:1261,0,1198 chr2 102351902 . T C 1109.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.202;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.55;ReadPosRankSum=0.625;SOR=0.693 GT:AD:DP:GQ:PL 0/1:27,27:54:99:1138,0,1116 chr2 102362568 . C T 465.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.609;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.41;ReadPosRankSum=1.277;SOR=1.179 GT:AD:DP:GQ:PL 0/1:8,16:24:99:494,0,194 chr2 102367819 . T C 1439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.431;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=3.387;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.54;ReadPosRankSum=0.153;SOR=1.161 GT:AD:DP:GQ:PL 0/1:51,48:99:99:1468,0,1460 chr2 102368164 . C G 553.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.510;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.17;ReadPosRankSum=0.373;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,16:22:99:582,0,184 chr2 102368224 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.44;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 102376215 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 102381819 . A G 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=-0.108;SOR=0.495 GT:AD:DP:GQ:PL 0/1:9,7:16:99:244,0,323 chr2 102384942 . C T 903.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.726;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=3.425;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.29;ReadPosRankSum=-0.877;SOR=1.270 GT:AD:DP:GQ:PL 0/1:34,34:68:99:932,0,877 chr2 102385138 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr2 102389927 . A G 1002.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.040;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.90;ReadPosRankSum=0.673;SOR=0.752 GT:AD:DP:GQ:PL 0/1:52,40:92:99:1031,0,1411 chr2 102389988 . C T 1532.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.091;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=1.474;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=0.511;SOR=0.543 GT:AD:DP:GQ:PL 0/1:59,58:117:99:1561,0,1590 chr2 102394452 . C T 641.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.583;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=3.822;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.44;ReadPosRankSum=-1.275;SOR=0.324 GT:AD:DP:GQ:PL 0/1:43,25:68:99:670,0,1237 chr2 102411581 . G T 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.536;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.027;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=0.313;SOR=1.329 GT:AD:DP:GQ:PL 0/1:8,6:14:99:208,0,475 chr2 102415729 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 102423124 . A T 1022.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.62;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1051,78,0 chr2 102423469 . G A 460.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.34;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:489,36,0 chr2 102423789 . C T 781.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.04;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,18:18:54:810,54,0 chr2 102424485 . G A 717.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.088;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=4.393;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.75;ReadPosRankSum=1.394;SOR=2.670 GT:AD:DP:GQ:PL 0/1:12,21:33:99:746,0,368 chr2 102432278 . G A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.920;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.05;ReadPosRankSum=1.255;SOR=1.329 GT:AD:DP:GQ:PL 0/1:10,4:14:99:113,0,307 chr2 102432614 . A G 127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.086;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.99;ReadPosRankSum=-1.062;SOR=0.784 GT:AD:DP:GQ:PL 0/1:11,5:16:99:156,0,377 chr2 102441208 . G A 1114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.030;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=0.793;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.72;ReadPosRankSum=0.173;SOR=0.800 GT:AD:DP:GQ:PL 0/1:61,43:104:99:1143,0,1742 chr2 102443153 . A G 2148.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.56;SOR=0.886 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2177,198,0 chr2 102446780 . T G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 102446909 . G A 818.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.75;SOR=1.893 GT:AD:DP:GQ:PL 1/1:0,25:25:75:847,75,0 chr2 102452327 . G A 309.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.42;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:338,27,0 chr2 102452374 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 102473668 . C T 132.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.812;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.06;ReadPosRankSum=1.201;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:161,0,256 chr2 102473809 . T C 1682.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.381;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.25;ReadPosRankSum=1.676;SOR=0.666 GT:AD:DP:GQ:PL 0/1:61,66:127:99:1711,0,1684 chr2 102501289 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 102501368 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 102501451 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 102503720 . C T 1330.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.022;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=2.835;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.86;ReadPosRankSum=-0.946;SOR=0.425 GT:AD:DP:GQ:PL 0/1:46,50:96:99:1359,0,1352 chr2 102503773 . G A 841.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.622;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=3.703;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.58;ReadPosRankSum=1.577;SOR=1.354 GT:AD:DP:GQ:PL 0/1:31,31:62:99:870,0,862 chr2 102503852 . G A 327.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.603;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=8.098;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.25;ReadPosRankSum=-2.462;SOR=2.891 GT:AD:DP:GQ:PL 0/1:12,11:23:99:356,0,330 chr2 102503897 . C T 67.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.054;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.78;ReadPosRankSum=0.872;SOR=1.609 GT:AD:DP:GQ:PL 0/1:7,3:10:96:96,0,196 chr2 102503941 . C T 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-0.084;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr2 102508679 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 102508723 . C T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.96;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 102508998 . A G 2035.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.84;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:99:2064,141,0 chr2 102509007 . T C 2035.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.71;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,47:47:99:2064,141,0 chr2 102509173 . C T 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.04;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 102512407 . T C 2461.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.27;SOR=1.739 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2490,222,0 chr2 102519850 . T C 4734.77 PASS AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.36;SOR=0.789 GT:AD:DP:GQ:PL 1/1:0,151:151:99:4763,453,0 chr2 102519987 . T G 2109.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.59;SOR=2.119 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2138,183,0 chr2 102520100 . T C 187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.549;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.78;ReadPosRankSum=-0.210;SOR=0.569 GT:AD:DP:GQ:PL 0/1:3,7:10:79:216,0,79 chr2 102524988 . A G 657.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.236;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.90;ReadPosRankSum=0.475;SOR=0.770 GT:AD:DP:GQ:PL 0/1:26,25:51:99:686,0,796 chr2 102525192 . G C 745.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.24;SOR=2.200 GT:AD:DP:GQ:PL 1/1:0,21:21:63:774,63,0 chr2 102526032 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 102526036 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 102526535 . G A 516.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.666;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.14;ReadPosRankSum=0.756;SOR=0.941 GT:AD:DP:GQ:PL 0/1:12,15:27:99:545,0,385 chr2 102532641 . G A 1347.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.627;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=5.093;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.61;ReadPosRankSum=1.171;SOR=1.276 GT:AD:DP:GQ:PL 0/1:53,46:99:99:1376,0,1499 chr2 102532703 . A G 1350.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.175;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.866;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.47;ReadPosRankSum=-1.203;SOR=0.904 GT:AD:DP:GQ:PL 0/1:45,37:82:99:1379,0,1696 chr2 102532723 . A G 1228.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.378;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.886;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.83;ReadPosRankSum=-0.948;SOR=0.818 GT:AD:DP:GQ:PL 0/1:40,33:73:99:1257,0,1616 chr2 102532751 . G A 845.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.504;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.961;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.01;ReadPosRankSum=0.237;SOR=0.538 GT:AD:DP:GQ:PL 0/1:33,32:65:99:874,0,870 chr2 102576905 . T A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.80;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:31:81,0,31 chr2 102596541 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 102596545 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 102664958 . A C 373.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.671;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=1.323;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.13;ReadPosRankSum=0.415;SOR=0.450 GT:AD:DP:GQ:PL 0/1:29,17:46:99:402,0,835 chr2 102665501 . A G 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.55;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 102666340 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 102682972 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 102684047 . A G 2455.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.11;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2484,216,0 chr2 102701381 . T C 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=1.465;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,183 chr2 102704953 . T C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 102708116 . T C 796.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.985;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=7.764;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.26;ReadPosRankSum=-0.767;SOR=0.139 GT:AD:DP:GQ:PL 0/1:20,29:49:99:825,0,619 chr2 102724082 . T C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 102758140 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 102758597 . T G 1262.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.058;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.38;ReadPosRankSum=0.521;SOR=0.669 GT:AD:DP:GQ:PL 0/1:59,52:111:99:1291,0,1534 chr2 102760834 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 102762398 . C G 1153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.336;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.38;ReadPosRankSum=-1.598;SOR=0.641 GT:AD:DP:GQ:PL 0/1:36,39:75:99:1182,0,1062 chr2 102764539 . C G 279.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.170;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.48;ReadPosRankSum=0.835;SOR=0.446 GT:AD:DP:GQ:PL 0/1:20,13:33:99:308,0,600 chr2 102814945 . T C 2354.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.40;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2383,225,0 chr2 103494476 . G C 260.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.001;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=4.713;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.72;ReadPosRankSum=-0.537;SOR=0.148 GT:AD:DP:GQ:PL 0/1:5,14:19:99:289,0,118 chr2 104232286 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 104232291 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 104240418 . C T 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:3,4:7:99:112,0,104 chr2 104340903 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 104379342 . C T 1277.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.839;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=3.656;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.17;ReadPosRankSum=1.380;SOR=1.132 GT:AD:DP:GQ:PL 0/1:58,47:105:99:1306,0,1762 chr2 104540435 . A G 62.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:90,9,0 chr2 104549216 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 104549298 . C A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.62;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 104785903 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.74;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 104785919 . A G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.94;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 104785931 . A G 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.17;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr2 104785935 . A G 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.66;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr2 104785969 . T C 380.77 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.08;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:30:409,30,0 chr2 104785976 . T A 380.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:30:409,30,0 chr2 104825712 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 104835868 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 104842290 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 104845954 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 104853406 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.72;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 104855597 . T C 363.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.07;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:33:392,33,0 chr2 104857240 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 105036229 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 105037988 . A G 761.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.63;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,21:21:63:790,63,0 chr2 105038258 . C T 5698.77 PASS AC=2;AF=1.00;AN=2;DP=180;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.84;SOR=1.128 GT:AD:DP:GQ:PL 1/1:0,179:179:99:5727,537,0 chr2 105038372 . G T 2144.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.82;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2173,174,0 chr2 105092565 . T C 2478.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.50;SOR=2.864 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2507,221,0 chr2 105255878 . T C 73.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:101,12,0 chr2 105268975 . C T 321.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.18;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:30:350,30,0 chr2 105269504 . T C 3968.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.92;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3997,351,0 chr2 105272892 . G A 2073.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.42;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2102,198,0 chr2 105280804 . C T 851.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.07;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,25:25:75:880,75,0 chr2 105307560 . C T 2825.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.74;SOR=2.484 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2854,240,0 chr2 105361304 . G A 1109.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.222;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=0.674;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.16;ReadPosRankSum=-0.830;SOR=0.741 GT:AD:DP:GQ:PL 0/1:90,46:136:99:1138,0,2441 chr2 105363049 . T C 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=0.712;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr2 105363273 . C A 4316.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.975;ClippingRankSum=0.000;DP=341;ExcessHet=3.0103;FS=2.962;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=-0.493;SOR=0.874 GT:AD:DP:GQ:PL 0/1:182,157:339:99:4345,0,4907 chr2 105369214 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 105369704 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 105377819 . T C 201.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.471;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=2.881;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.81;ReadPosRankSum=-1.139;SOR=0.197 GT:AD:DP:GQ:PL 0/1:4,8:12:99:230,0,131 chr2 105390419 . C T 314.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.497;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.23;ReadPosRankSum=0.256;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,10:12:47:343,0,47 chr2 105396690 . C T 995.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.069;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=5.362;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.71;ReadPosRankSum=1.807;SOR=1.278 GT:AD:DP:GQ:PL 0/1:52,41:93:99:1024,0,1279 chr2 105396759 . T C 805.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.468;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=11.758;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.52;ReadPosRankSum=0.606;SOR=0.059 GT:AD:DP:GQ:PL 0/1:17,29:46:99:834,0,538 chr2 105396791 . C T 539.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.381;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=5.724;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.99;ReadPosRankSum=1.148;SOR=0.086 GT:AD:DP:GQ:PL 0/1:9,18:27:99:568,0,275 chr2 105400464 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 105428257 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 105493727 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 105548628 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 105548636 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 105570345 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 105577996 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 105578013 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 105585848 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 105585857 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 105751224 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 105854871 . C A 1045.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.066;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=1.731;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.87;ReadPosRankSum=-1.991;SOR=1.432 GT:AD:DP:GQ:PL 0/1:31,31:62:99:1074,0,972 chr2 105854937 . T C 2088.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.260;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=1.467;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.36;ReadPosRankSum=-0.964;SOR=0.910 GT:AD:DP:GQ:PL 0/1:59,77:136:99:2117,0,1501 chr2 105893451 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 105901513 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 105927817 . G A 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr2 105960770 . T C 57.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:85,9,0 chr2 106044118 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 106073681 . G A 568.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.992;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=2.764;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.88;ReadPosRankSum=0.959;SOR=0.250 GT:AD:DP:GQ:PL 0/1:9,17:26:99:597,0,297 chr2 106074086 . G A 535.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.692;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=2.156;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.48;ReadPosRankSum=0.751;SOR=1.519 GT:AD:DP:GQ:PL 0/1:20,17:37:99:564,0,648 chr2 106097378 . C T 164.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.98;ReadPosRankSum=-1.465;SOR=0.368 GT:AD:DP:GQ:PL 0/1:9,6:15:99:193,0,331 chr2 106097582 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 106098300 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 106098497 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 106098886 . G A,T 844.77 PASS AC=1,1;AF=0.500,0.500;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=60.00;QD=31.29;SOR=2.387 GT:AD:DP:GQ:PL 1/2:0,15,12:27:99:873,394,349,479,0,443 chr2 106100715 . T C 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.389;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=7.830;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.84;ReadPosRankSum=-0.543;SOR=3.407 GT:AD:DP:GQ:PL 0/1:6,8:14:99:292,0,174 chr2 106100818 . A G 1103.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.029;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.999;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.12;ReadPosRankSum=-0.284;SOR=0.498 GT:AD:DP:GQ:PL 0/1:31,42:73:99:1132,0,939 chr2 106101200 . G A 771.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.238;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.710;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.29;ReadPosRankSum=1.216;SOR=1.214 GT:AD:DP:GQ:PL 0/1:29,25:54:99:800,0,885 chr2 106101287 . C T 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.63;ReadPosRankSum=-1.282;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:146,0,65 chr2 106105099 . G A 71.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.97;ReadPosRankSum=-1.534;SOR=1.270 GT:AD:DP:GQ:PL 0/1:5,3:8:99:100,0,151 chr2 106110574 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 106110672 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 106125683 . C T 4820.77 PASS AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.93;SOR=1.345 GT:AD:DP:GQ:PL 1/1:0,151:151:99:4849,452,0 chr2 106125721 . T A 3672.77 PASS AC=2;AF=1.00;AN=2;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.70;SOR=2.197 GT:AD:DP:GQ:PL 1/1:0,109:109:99:3701,326,0 chr2 106127875 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 106160420 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 106163559 . C T 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr2 106165942 . C G 795.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.60;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,23:23:69:824,69,0 chr2 106166263 . A C 258.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.62;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:287,21,0 chr2 106178288 . T C 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr2 106194271 . A G 1962.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.27;SOR=1.903 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1991,176,0 chr2 106194538 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 106198442 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 106198462 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 106253635 . G A 169.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.182;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=2.430;MLEAC=1;MLEAF=0.500;MQ=48.89;MQRankSum=-4.621;QD=2.46;ReadPosRankSum=1.734;SOR=0.412 GT:AD:DP:GQ:PL 0/1:53,16:69:99:198,0,1499 chr2 106253810 . C T 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.63;MQRankSum=-0.524;QD=7.95;ReadPosRankSum=0.524;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,107 chr2 106278613 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 106278756 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 106291689 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 106318596 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 106370898 . T C 809.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.838;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=3.080;MLEAC=1;MLEAF=0.500;MQ=58.84;MQRankSum=0.673;QD=15.28;ReadPosRankSum=-1.595;SOR=2.235 GT:AD:DP:GQ:PL 0/1:28,25:53:99:838,0,762 chr2 106371045 . C T 2101.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.073;ClippingRankSum=0.000;DP=195;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.62;MQRankSum=-2.656;QD=10.78;ReadPosRankSum=0.238;SOR=0.669 GT:AD:DP:GQ:PL 0/1:107,88:195:99:2130,0,2666 chr2 106376496 . A G 2266.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.29;QD=32.22;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,51:51:99:2295,156,0 chr2 106376696 . G T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.11;QD=28.99;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 106377926 . A G 130.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.85;QD=26.18;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:159,15,0 chr2 106377999 . C T 176.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.47;QD=24.87;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:205,15,0 chr2 106386190 . G C 746.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.816;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.381;MLEAC=1;MLEAF=0.500;MQ=56.79;MQRankSum=-4.348;QD=14.09;ReadPosRankSum=1.422;SOR=1.145 GT:AD:DP:GQ:PL 0/1:27,26:53:99:775,0,851 chr2 106391120 . A T 237.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.215;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.197;MLEAC=1;MLEAF=0.500;MQ=58.07;MQRankSum=-1.192;QD=11.32;ReadPosRankSum=0.720;SOR=1.445 GT:AD:DP:GQ:PL 0/1:12,9:21:99:266,0,370 chr2 106391697 . C A 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.660;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=42.38;MQRankSum=-1.335;QD=3.07;ReadPosRankSum=0.365;SOR=0.132 GT:AD:DP:GQ:PL 0/1:8,3:11:62:62,0,216 chr2 106403418 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.18;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 106415823 . T C 2155.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.348;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.34;MQRankSum=-4.915;QD=14.37;ReadPosRankSum=0.564;SOR=0.713 GT:AD:DP:GQ:PL 0/1:61,89:150:99:2184,0,1489 chr2 106457013 . T A 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.788;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=1.449;MLEAC=1;MLEAF=0.500;MQ=48.19;MQRankSum=-1.518;QD=7.96;ReadPosRankSum=-1.301;SOR=0.425 GT:AD:DP:GQ:PL 0/1:16,13:29:99:259,0,445 chr2 106457045 . C T 168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.117;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=3.771;MLEAC=1;MLEAF=0.500;MQ=50.53;MQRankSum=-0.588;QD=6.25;ReadPosRankSum=-0.510;SOR=1.317 GT:AD:DP:GQ:PL 0/1:18,9:27:99:197,0,466 chr2 106468283 . A G 978.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.297;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=3.811;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.31;ReadPosRankSum=0.476;SOR=0.317 GT:AD:DP:GQ:PL 0/1:24,36:60:99:1007,0,626 chr2 106475937 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 106483564 . C G 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.501;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=-0.241;SOR=2.584 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,103 chr2 106490654 . G A 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.68;MQRankSum=-0.180;QD=14.35;ReadPosRankSum=1.006;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,127 chr2 106491111 . G C 3944.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.129;ClippingRankSum=0.000;DP=328;ExcessHet=3.0103;FS=3.632;MLEAC=1;MLEAF=0.500;MQ=54.46;MQRankSum=1.198;QD=12.03;ReadPosRankSum=-1.173;SOR=0.886 GT:AD:DP:GQ:PL 0/1:176,152:328:99:3973,0,4557 chr2 106491238 . A G 2677.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=45.51;QD=32.39;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2706,226,0 chr2 106491309 . C A 1126.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.91;QD=26.56;SOR=3.407 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1155,90,0 chr2 106491883 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 106493063 . A C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 106495955 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=45.37;MQRankSum=-1.383;QD=10.94;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr2 106496418 . T C 281.78 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.08;QD=31.31;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:310,27,0 chr2 106502440 . T C 1408.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.52;QD=33.54;SOR=2.780 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1437,125,0 chr2 106502680 . G C 1312.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.00;SOR=2.012 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1341,111,0 chr2 106514490 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.52;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 106514525 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.52;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 106523304 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 106523327 . C G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 106526016 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 106559132 . C A 200.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.009;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.059;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.38;ReadPosRankSum=-2.929;SOR=1.402 GT:AD:DP:GQ:PL 0/1:6,9:15:99:229,0,137 chr2 106619123 . G A 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 106697895 . A G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=45.44;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=0.000;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,185 chr2 106697901 . T C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=45.44;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=0.000;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,185 chr2 106727305 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 106806732 . G A 1951.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.899;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=5.073;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.74;ReadPosRankSum=-0.326;SOR=0.492 GT:AD:DP:GQ:PL 0/1:62,80:142:99:1980,0,1699 chr2 106806939 . T G 4321.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.958;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.32;ReadPosRankSum=-0.558;SOR=0.295 GT:AD:DP:GQ:PL 1/1:1,137:138:99:4350,403,0 chr2 106807824 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 106813345 . C T 1372.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.33;SOR=3.797 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1401,108,0 chr2 106829940 . T C 382.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.53;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:411,30,0 chr2 106829974 . T C 487.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.84;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:516,42,0 chr2 106832865 . A T 361.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.12;SOR=2.448 GT:AD:DP:GQ:PL 1/1:0,15:15:45:390,45,0 chr2 106844018 . T G 1982.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.175;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=0.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.12;ReadPosRankSum=0.892;SOR=0.771 GT:AD:DP:GQ:PL 0/1:47,76:123:99:2011,0,1064 chr2 106856007 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 106871629 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 107119776 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 107119785 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 107188133 . C T 256.18 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.944;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.71;ReadPosRankSum=-0.844;SOR=1.270 GT:AD:DP:GQ:PL 0/1:2,11:13:10:284,0,10 chr2 107213217 . G T 90.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:118,12,0 chr2 107255627 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 107285610 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 107459160 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 107488837 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 107488838 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 107615786 . G A 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr2 107826869 . T C 493.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.209;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=4.612;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.51;ReadPosRankSum=-1.890;SOR=2.147 GT:AD:DP:GQ:PL 0/1:8,13:21:99:522,0,457 chr2 107826872 . A T 493.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.490;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=4.612;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.51;ReadPosRankSum=-0.969;SOR=2.147 GT:AD:DP:GQ:PL 0/1:8,13:21:99:522,0,457 chr2 107827797 . G T 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.61;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr2 107827846 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 107859502 . A G 2049.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.982;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=1.134;MLEAC=1;MLEAF=0.500;MQ=44.77;MQRankSum=4.118;QD=10.00;ReadPosRankSum=-0.264;SOR=0.793 GT:AD:DP:GQ:PL 0/1:122,83:205:99:2078,0,2985 chr2 107870874 . A G 2289.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.144;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=1.825;MLEAC=1;MLEAF=0.500;MQ=42.65;MQRankSum=1.821;QD=12.44;ReadPosRankSum=-0.521;SOR=0.866 GT:AD:DP:GQ:PL 0/1:89,95:184:99:2318,0,2085 chr2 107871370 . C T 522.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.530;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=12.630;MLEAC=1;MLEAF=0.500;MQ=44.69;MQRankSum=-4.227;QD=7.80;ReadPosRankSum=-0.831;SOR=3.191 GT:AD:DP:GQ:PL 0/1:50,17:67:99:551,0,2012 chr2 107871373 . G C 453.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.613;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=10.091;MLEAC=1;MLEAF=0.500;MQ=44.66;MQRankSum=-4.227;QD=7.32;ReadPosRankSum=-0.685;SOR=2.881 GT:AD:DP:GQ:PL 0/1:47,15:62:99:482,0,1987 chr2 107879979 . T A 911.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.974;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.92;MQRankSum=0.814;QD=14.03;ReadPosRankSum=-1.038;SOR=0.565 GT:AD:DP:GQ:PL 0/1:30,35:65:99:940,0,921 chr2 107892813 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.39;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 107920879 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.52;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 107948298 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 107986463 . A C 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.000;SOR=2.245 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr2 107987955 . T C 175.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.11;ReadPosRankSum=0.967;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:99:204,0,102 chr2 107987962 . C T 207.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.09;ReadPosRankSum=0.751;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:99:236,0,137 chr2 108002084 . G A 1255.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.703;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=8.319;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.25;ReadPosRankSum=-0.326;SOR=0.152 GT:AD:DP:GQ:PL 0/1:17,45:62:99:1284,0,478 chr2 108006490 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 108010012 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 108031757 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 108031761 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 108065096 . A G 31.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0 chr2 108247194 . A C 954.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.428;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=3.621;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.64;ReadPosRankSum=0.771;SOR=1.286 GT:AD:DP:GQ:PL 0/1:37,33:70:99:983,0,1029 chr2 108247311 . A C 1219.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.399;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=3.569;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=0.646;SOR=0.810 GT:AD:DP:GQ:PL 0/1:58,49:107:99:1248,0,1566 chr2 108252280 . G A 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=-0.812;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,224 chr2 108260441 . A G 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=-0.524;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr2 108260492 . C T 173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=3.358;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.37;ReadPosRankSum=-1.181;SOR=0.132 GT:AD:DP:GQ:PL 0/1:7,6:13:99:202,0,253 chr2 108260606 . T A 740.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.110;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.98;ReadPosRankSum=-0.078;SOR=0.668 GT:AD:DP:GQ:PL 0/1:21,32:53:99:769,0,439 chr2 108277453 . T C 279.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:308,27,0 chr2 108277634 . A T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.385;SOR=2.093 GT:AD:DP:GQ:PL 0/1:3,3:6:73:107,0,73 chr2 108298680 . T C 273.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.534;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=3.212;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.84;ReadPosRankSum=0.699;SOR=1.538 GT:AD:DP:GQ:PL 0/1:28,12:40:99:302,0,715 chr2 108298807 . C T 405.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.699;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.61;ReadPosRankSum=1.454;SOR=1.136 GT:AD:DP:GQ:PL 0/1:13,13:26:99:434,0,363 chr2 108304554 . C T 731.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.032;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=4.678;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.25;ReadPosRankSum=-1.521;SOR=0.219 GT:AD:DP:GQ:PL 0/1:19,29:48:99:760,0,547 chr2 108322059 . C A 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.842;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr2 108322096 . T G 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.91;ReadPosRankSum=0.032;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,5:13:99:170,0,295 chr2 108329700 . T C 357.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.480;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=1.569;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.84;ReadPosRankSum=0.021;SOR=0.317 GT:AD:DP:GQ:PL 0/1:18,15:33:99:386,0,510 chr2 108329722 . A G 219.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.195;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=5.454;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.99;ReadPosRankSum=-0.491;SOR=0.096 GT:AD:DP:GQ:PL 0/1:11,9:20:99:248,0,364 chr2 108352394 . C T 893.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.519;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=4.039;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.16;ReadPosRankSum=0.760;SOR=1.071 GT:AD:DP:GQ:PL 0/1:49,39:88:99:922,0,1271 chr2 108378352 . C G 967.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.377;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=8.705;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.52;ReadPosRankSum=-1.350;SOR=1.721 GT:AD:DP:GQ:PL 0/1:58,34:92:99:996,0,1743 chr2 108383330 . T C 935.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.200;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=5.329;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.18;ReadPosRankSum=0.848;SOR=0.265 GT:AD:DP:GQ:PL 0/1:33,38:71:99:964,0,950 chr2 108387305 . A G 2058.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.071;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.71;ReadPosRankSum=0.500;SOR=0.687 GT:AD:DP:GQ:PL 0/1:76,86:162:99:2087,0,1873 chr2 108412610 . A G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:57:81,0,57 chr2 108412631 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,79 chr2 108449832 . A G 219.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.13;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:248,18,0 chr2 108483116 . C G 1114.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.85;SOR=1.483 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1143,105,0 chr2 108507786 . T A 177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.605;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.47;MQRankSum=-0.605;QD=16.16;ReadPosRankSum=-0.230;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:206,0,176 chr2 108507823 . G C 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.42;MQRankSum=0.842;QD=20.13;ReadPosRankSum=-0.842;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:50:149,0,50 chr2 108513374 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 108513375 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 108662367 . T C 3724.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.635;ClippingRankSum=0.000;DP=698;ExcessHet=3.0103;FS=1.968;MLEAC=1;MLEAF=0.500;MQ=54.99;MQRankSum=-25.453;QD=5.35;ReadPosRankSum=-0.137;SOR=0.909 GT:AD:DP:GQ:PL 0/1:491,205:696:99:3753,0,13640 chr2 108673129 . A C 136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.538;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=2.199;MLEAC=1;MLEAF=0.500;MQ=44.34;MQRankSum=-1.184;QD=7.20;ReadPosRankSum=1.083;SOR=0.260 GT:AD:DP:GQ:PL 0/1:12,7:19:99:165,0,362 chr2 108675824 . T C 9899.77 PASS AC=2;AF=1.00;AN=2;DP=299;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.83;QD=33.22;SOR=1.562 GT:AD:DP:GQ:PL 1/1:0,298:298:99:9928,894,0 chr2 108676434 . A C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 108712898 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 108719562 . C T 923.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.975;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.40;ReadPosRankSum=-0.165;SOR=0.610 GT:AD:DP:GQ:PL 0/1:28,32:60:99:952,0,751 chr2 108731491 . T G 570.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.04;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,19:19:57:599,57,0 chr2 108735458 . C G 1795.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.46;QD=29.85;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1824,150,0 chr2 108736047 . A G 755.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.87;QD=34.35;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,22:22:66:784,66,0 chr2 108736086 . G A 1324.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.17;QD=34.86;SOR=2.554 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1353,114,0 chr2 108736288 . C T 376.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.949;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.86;MQRankSum=-2.286;QD=8.19;ReadPosRankSum=0.199;SOR=0.725 GT:AD:DP:GQ:PL 0/1:29,17:46:99:405,0,903 chr2 108751521 . A G 584.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.800;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=11.712;MLEAC=1;MLEAF=0.500;MQ=44.43;MQRankSum=-6.026;QD=4.43;ReadPosRankSum=1.400;SOR=1.587 GT:AD:DP:GQ:PL 0/1:101,31:132:99:613,0,3035 chr2 108753264 . G T 669.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.33;QD=29.78;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:17:51:698,51,0 chr2 108758496 . A G 2678.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.49;QD=28.50;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2707,282,0 chr2 108764982 . A G 909.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.652;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=7.346;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.37;ReadPosRankSum=0.989;SOR=1.031 GT:AD:DP:GQ:PL 0/1:45,35:80:99:938,0,1313 chr2 108772390 . G A 547.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.22;SOR=2.179 GT:AD:DP:GQ:PL 1/1:0,17:17:51:576,51,0 chr2 108772668 . A T 692.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.64;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,20:20:60:721,60,0 chr2 108773007 . G A 4008.77 PASS AC=2;AF=1.00;AN=2;DP=137;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.26;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,137:137:99:4037,410,0 chr2 108777310 . A T 2960.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.12;SOR=3.578 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2989,202,0 chr2 108777318 . A T 2806.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.14;SOR=3.407 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2835,190,0 chr2 108777323 . A T 2671.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.13;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2700,181,0 chr2 108777324 . G T 2626.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.41;SOR=3.990 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2655,178,0 chr2 108777325 . A T 2581.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.87;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,54:54:99:2610,175,0 chr2 108777398 . G A 236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.76;ReadPosRankSum=1.401;SOR=0.307 GT:AD:DP:GQ:PL 0/1:14,8:22:99:265,0,519 chr2 108786645 . G C 823.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.39;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:852,60,0 chr2 108786656 . T C 284.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.962;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.56;ReadPosRankSum=0.428;SOR=0.465 GT:AD:DP:GQ:PL 0/1:12,9:21:99:313,0,406 chr2 108791703 . G T 122.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.552;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=4.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.55;ReadPosRankSum=-0.773;SOR=0.966 GT:AD:DP:GQ:PL 0/1:19,8:27:99:151,0,508 chr2 108791752 . G A 681.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.09;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,20:20:60:710,60,0 chr2 108794393 . C T 324.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.47;ReadPosRankSum=0.648;SOR=0.610 GT:AD:DP:GQ:PL 0/1:11,10:21:99:353,0,393 chr2 108873648 . A G 677.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.57;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:706,51,0 chr2 108896865 . C A 2259.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.725;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=3.754;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.91;ReadPosRankSum=-0.006;SOR=1.004 GT:AD:DP:GQ:PL 0/1:93,82:175:99:2288,0,2460 chr2 108907490 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 108910513 . G A 5456.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.103;ClippingRankSum=0.000;DP=461;ExcessHet=3.0103;FS=1.751;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=-0.974;SOR=0.830 GT:AD:DP:GQ:PL 0/1:242,218:460:99:5485,0,6494 chr2 108910917 . A G 4311.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.884;ClippingRankSum=0.000;DP=335;ExcessHet=3.0103;FS=1.354;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.87;ReadPosRankSum=0.196;SOR=0.778 GT:AD:DP:GQ:PL 0/1:173,162:335:99:4340,0,4572 chr2 108923197 . A G 1813.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.349;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=0.756;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.64;ReadPosRankSum=-0.235;SOR=0.604 GT:AD:DP:GQ:PL 0/1:68,48:116:99:1842,0,4122 chr2 108923198 . T C 1813.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.044;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.50;ReadPosRankSum=-0.446;SOR=0.631 GT:AD:DP:GQ:PL 0/1:68,49:117:99:1842,0,4122 chr2 108923318 . G A 3462.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.421;ClippingRankSum=0.000;DP=289;ExcessHet=3.0103;FS=1.976;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.98;ReadPosRankSum=-0.858;SOR=0.838 GT:AD:DP:GQ:PL 0/1:156,133:289:99:3491,0,4201 chr2 108923457 . C T 2435.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.891;ClippingRankSum=0.000;DP=208;ExcessHet=3.0103;FS=1.108;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.71;ReadPosRankSum=0.561;SOR=0.582 GT:AD:DP:GQ:PL 0/1:113,95:208:99:2464,0,3187 chr2 108923580 . C G 1112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.691;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=2.133;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=0.057;SOR=0.451 GT:AD:DP:GQ:PL 0/1:40,39:79:99:1141,0,1127 chr2 109021052 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 109045587 . C T 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr2 109057917 . T A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 109090246 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 109116823 . T C 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr2 109128720 . G A 1235.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.25;SOR=4.112 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1264,99,0 chr2 109141263 . C T 148.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:177,15,0 chr2 109145626 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 109150240 . G A 66.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:94,9,0 chr2 109202409 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 109204545 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 109347975 . C T 1617.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.436;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=3.462;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=0.136;SOR=1.041 GT:AD:DP:GQ:PL 0/1:64,62:126:99:1646,0,1641 chr2 109352834 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 109371759 . C G 2020.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.01;SOR=4.534 GT:AD:DP:GQ:PL 1/1:0,51:51:99:2049,153,0 chr2 109398117 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 109399089 . G A 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=-0.533;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:259,0,134 chr2 109403286 . C A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.253;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 109408767 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 109410010 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 109432779 . G A 412.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.228;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=4.091;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.23;ReadPosRankSum=-0.666;SOR=1.705 GT:AD:DP:GQ:PL 0/1:14,15:29:99:441,0,362 chr2 109436753 . T G 1657.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.565;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.93;ReadPosRankSum=-1.110;SOR=0.695 GT:AD:DP:GQ:PL 0/1:57,62:119:99:1686,0,1452 chr2 109488484 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 109491851 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 109499608 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 109539797 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 109564659 . A T 63.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.097;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.55;ReadPosRankSum=0.000;SOR=0.760 GT:AD:DP:GQ:PL 0/1:21,4:25:92:92,0,598 chr2 109574553 . G C 877.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.639;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=1.033;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.54;ReadPosRankSum=2.352;SOR=0.474 GT:AD:DP:GQ:PL 0/1:33,37:70:99:906,0,931 chr2 109585493 . G C 226.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.812;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.90;ReadPosRankSum=-0.998;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:255,0,161 chr2 109613318 . G A 365.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.482;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.63;ReadPosRankSum=0.616;SOR=1.609 GT:AD:DP:GQ:PL 0/1:13,12:25:99:394,0,433 chr2 109613671 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 109614045 . C G 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr2 109614615 . A G 3209.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.80;SOR=2.329 GT:AD:DP:GQ:PL 1/1:0,91:91:99:3238,273,0 chr2 109616228 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.282;SOR=0.132 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr2 109647923 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 109647924 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 109670837 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 109710857 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 109732667 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 109984645 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 110028057 . A G 53.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=45.23;QD=17.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:81,9,0 chr2 110097546 . G T 8226.77 PASS AC=2;AF=1.00;AN=2;DP=265;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.04;SOR=0.846 GT:AD:DP:GQ:PL 1/1:0,265:265:99:8255,794,0 chr2 110099666 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 110103548 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 110125122 . A G 1129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.468;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.95;ReadPosRankSum=-0.762;SOR=0.800 GT:AD:DP:GQ:PL 0/1:39,42:81:99:1158,0,1013 chr2 110131531 . C T 214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.716;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.30;ReadPosRankSum=-0.751;SOR=0.425 GT:AD:DP:GQ:PL 0/1:11,8:19:99:243,0,371 chr2 110143318 . G A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 110144685 . G A 109.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.20;ReadPosRankSum=-0.751;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:138,0,182 chr2 110148087 . G A 371.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.168;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.906;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.87;ReadPosRankSum=-0.234;SOR=0.260 GT:AD:DP:GQ:PL 0/1:12,13:25:99:400,0,358 chr2 110148166 . T A 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-0.431;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr2 110161464 . A G 223.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.65;ReadPosRankSum=1.290;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:252,0,165 chr2 110161744 . C T 390.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.020;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=0.063;SOR=0.910 GT:AD:DP:GQ:PL 0/1:20,15:35:99:419,0,594 chr2 110165126 . C T 412.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.772;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=1.050;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.12;ReadPosRankSum=-1.222;SOR=0.512 GT:AD:DP:GQ:PL 0/1:38,20:58:99:441,0,937 chr2 110178290 . A G 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.18;ReadPosRankSum=0.386;SOR=1.112 GT:AD:DP:GQ:PL 0/1:6,9:15:99:331,0,205 chr2 110184573 . G A 755.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.762;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=3.344;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.11;ReadPosRankSum=0.832;SOR=0.365 GT:AD:DP:GQ:PL 0/1:37,31:68:99:784,0,1031 chr2 110184919 . G A 196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.293;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.87;ReadPosRankSum=0.319;SOR=0.770 GT:AD:DP:GQ:PL 0/1:17,8:25:99:225,0,569 chr2 110185079 . A G 207.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.196;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=1.599;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.70;ReadPosRankSum=-0.862;SOR=1.136 GT:AD:DP:GQ:PL 0/1:17,10:27:99:236,0,481 chr2 110185117 . T C 273.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.168;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.83;ReadPosRankSum=-1.613;SOR=0.836 GT:AD:DP:GQ:PL 0/1:18,13:31:99:302,0,454 chr2 110185239 . G C 268.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.394;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=1.922;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=0.272;SOR=0.307 GT:AD:DP:GQ:PL 0/1:9,11:20:99:297,0,248 chr2 110202321 . C G 2690.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.204;ClippingRankSum=0.000;DP=199;ExcessHet=3.0103;FS=4.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=-0.567;SOR=0.420 GT:AD:DP:GQ:PL 0/1:100,98:198:99:2719,0,2804 chr2 110666456 . C T 775.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.41;ReadPosRankSum=1.662;SOR=1.040 GT:AD:DP:GQ:PL 0/1:16,22:38:99:804,0,554 chr2 110886898 . C T 768.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.724;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.24;ReadPosRankSum=-1.538;SOR=0.793 GT:AD:DP:GQ:PL 0/1:26,28:54:99:797,0,774 chr2 110887018 . C T 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=-0.533;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:259,0,134 chr2 110968234 . A G 125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.97;ReadPosRankSum=1.981;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:28:154,0,28 chr2 110986829 . G A 131.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.584;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.41;ReadPosRankSum=0.167;SOR=0.976 GT:AD:DP:GQ:PL 0/1:8,6:14:99:160,0,258 chr2 110986858 . A C 365.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.515;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.63;ReadPosRankSum=1.000;SOR=0.551 GT:AD:DP:GQ:PL 0/1:9,13:22:99:394,0,242 chr2 110995651 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 110995872 . G C 1294.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.556;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.59;ReadPosRankSum=0.702;SOR=0.730 GT:AD:DP:GQ:PL 0/1:79,56:135:99:1323,0,2129 chr2 111003410 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 111031515 . G A 1920.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.620;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=1.792;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.30;ReadPosRankSum=-0.097;SOR=0.941 GT:AD:DP:GQ:PL 0/1:47,64:111:99:1949,0,1391 chr2 111043491 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 111046934 . C A 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr2 111051753 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 111058285 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 111058294 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 111093621 . A T 202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.127;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.82;ReadPosRankSum=0.835;SOR=0.551 GT:AD:DP:GQ:PL 0/1:15,8:23:99:231,0,489 chr2 111114320 . G A 373.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.885;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.92;ReadPosRankSum=1.321;SOR=1.911 GT:AD:DP:GQ:PL 0/1:4,11:15:99:402,0,110 chr2 111120988 . C T 152.03 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.41;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 111128755 . C T 374.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.311;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.37;ReadPosRankSum=-1.949;SOR=0.622 GT:AD:DP:GQ:PL 0/1:22,18:40:99:403,0,560 chr2 111130126 . T A 129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.037;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.63;ReadPosRankSum=0.688;SOR=1.302 GT:AD:DP:GQ:PL 0/1:12,5:17:99:158,0,444 chr2 111150114 . T C 458.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.067;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.76;ReadPosRankSum=0.870;SOR=0.657 GT:AD:DP:GQ:PL 0/1:21,18:39:99:487,0,524 chr2 111151670 . A G 1436.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.022;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.96;ReadPosRankSum=1.270;SOR=0.791 GT:AD:DP:GQ:PL 0/1:36,54:90:99:1465,0,815 chr2 111152033 . A G 2125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.931;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=2.121;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.56;ReadPosRankSum=0.867;SOR=0.520 GT:AD:DP:GQ:PL 0/1:64,82:146:99:2154,0,1657 chr2 111161769 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 111201277 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 111258866 . A G 80.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.18;QD=26.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0 chr2 111315614 . A G 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.41;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr2 111315683 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 111384195 . C T 314.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.287;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=1.510;MLEAC=1;MLEAF=0.500;MQ=49.63;MQRankSum=-4.564;QD=11.66;ReadPosRankSum=0.846;SOR=1.061 GT:AD:DP:GQ:PL 0/1:12,15:27:99:343,0,250 chr2 111410223 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.64;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 111529192 . A G 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.42;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr2 111544221 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.46;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 111570643 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.39;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 111583303 . T C 53.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.18;QD=17.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:81,9,0 chr2 111638588 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 111638604 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 111660058 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 111702295 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 111710641 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 111710778 . T C 134.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.98;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:163,15,0 chr2 111710849 . G C 245.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.31;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:27:274,27,0 chr2 111713130 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 111782565 . T C 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.584;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=2.521;MLEAC=1;MLEAF=0.500;MQ=51.45;MQRankSum=-4.969;QD=3.82;ReadPosRankSum=0.860;SOR=1.460 GT:AD:DP:GQ:PL 0/1:36,11:47:99:208,0,1238 chr2 111792748 . C G 202.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.76;QD=33.81;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:231,18,0 chr2 111821217 . T C 1523.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.02;QD=32.42;SOR=2.786 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1552,141,0 chr2 111825899 . C T 595.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,21:21:63:624,63,0 chr2 111826017 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.03;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 111827018 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 111831174 . C T 655.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.62;QD=26.46;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,18:18:54:684,54,0 chr2 111831503 . G A 553.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=31.64;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:582,42,0 chr2 111833412 . A T 511.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.07;QD=30.10;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:17:51:540,51,0 chr2 111834433 . C A 207.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.14;QD=34.64;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:236,18,0 chr2 111847725 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=45.83;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 111847888 . T C 518.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.49;QD=28.82;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:54:547,54,0 chr2 111848342 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 111857008 . T A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.44;QD=26.49;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 111857012 . A C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.44;QD=26.08;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 111857021 . T C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.44;QD=29.44;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 111858108 . C T 32.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.33;QD=16.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:60,6,0 chr2 111862404 . G A 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.417;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=2.525;MLEAC=1;MLEAF=0.500;MQ=49.30;MQRankSum=-3.871;QD=2.69;ReadPosRankSum=0.000;SOR=1.751 GT:AD:DP:GQ:PL 0/1:26,7:33:99:117,0,862 chr2 111863459 . T C 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr2 111863506 . C T 466.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.75;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:495,33,0 chr2 111863532 . A T 789.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.66;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,19:19:57:818,57,0 chr2 111863622 . T C 2227.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.33;QD=26.68;SOR=6.736 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2256,173,0 chr2 111865066 . A G 435.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.63;QD=29.57;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,11:11:33:464,33,0 chr2 111865073 . T C 331.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.61;QD=31.24;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:360,24,0 chr2 111872835 . A C 809.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.97;QD=34.90;SOR=4.892 GT:AD:DP:GQ:PL 1/1:0,23:23:69:838,69,0 chr2 111873063 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 111875828 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 111879108 . G A 65.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.34;QD=21.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:93,9,0 chr2 111880940 . G C 470.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.28;QD=32.59;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:499,36,0 chr2 111883572 . G C 1412.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.71;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1441,137,0 chr2 111883679 . G A 1165.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.85;SOR=2.753 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1194,81,0 chr2 111883680 . A G 1165.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=2.753 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1194,81,0 chr2 111883689 . G C 1096.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.68;SOR=3.528 GT:AD:DP:GQ:PL 1/1:0,25:25:75:1125,75,0 chr2 111883706 . A G 916.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.03;SOR=3.716 GT:AD:DP:GQ:PL 1/1:0,20:20:63:945,63,0 chr2 111898795 . A T 1239.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.161;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.92;ReadPosRankSum=-0.874;SOR=0.693 GT:AD:DP:GQ:PL 0/1:52,52:104:99:1268,0,1289 chr2 111912297 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 111929662 . T C 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=1.180;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,223 chr2 111947580 . T C 744.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.488;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=2.013;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=1.029;SOR=0.228 GT:AD:DP:GQ:PL 0/1:15,22:37:99:773,0,465 chr2 111965540 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 111975139 . A G 518.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.74;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:547,42,0 chr2 111982669 . C T 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-0.842;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,81 chr2 111982796 . G A 544.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.912;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.02;ReadPosRankSum=-0.510;SOR=1.106 GT:AD:DP:GQ:PL 0/1:17,17:34:99:573,0,540 chr2 111994351 . G A 3538.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.690;ClippingRankSum=0.000;DP=317;ExcessHet=3.0103;FS=5.108;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-2.013;SOR=0.969 GT:AD:DP:GQ:PL 0/1:174,143:317:99:3567,0,4707 chr2 111994565 . A C 1468.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.338;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=2.275;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.32;ReadPosRankSum=-0.202;SOR=1.099 GT:AD:DP:GQ:PL 0/1:41,49:90:99:1497,0,1227 chr2 111995303 . G A 1567.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.272;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=5.407;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.23;ReadPosRankSum=-0.778;SOR=1.255 GT:AD:DP:GQ:PL 0/1:37,54:91:99:1596,0,1033 chr2 111995520 . A C 1464.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.263;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=2.475;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.31;ReadPosRankSum=-0.437;SOR=0.976 GT:AD:DP:GQ:PL 0/1:67,52:119:99:1493,0,1794 chr2 111995653 . T C 371.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.57;ReadPosRankSum=0.401;SOR=1.022 GT:AD:DP:GQ:PL 0/1:8,11:19:99:400,0,277 chr2 111996306 . C T 859.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.218;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=3.558;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=-1.642;SOR=1.255 GT:AD:DP:GQ:PL 0/1:32,29:61:99:888,0,1015 chr2 111996652 . T C 2611.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.903;ClippingRankSum=0.000;DP=178;ExcessHet=3.0103;FS=0.576;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.67;ReadPosRankSum=-0.613;SOR=0.612 GT:AD:DP:GQ:PL 0/1:78,100:178:99:2640,0,2032 chr2 111997424 . A G 1296.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.773;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=0.813;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.25;ReadPosRankSum=-1.274;SOR=0.849 GT:AD:DP:GQ:PL 0/1:46,45:91:99:1325,0,1305 chr2 111997632 . G A 198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.85;ReadPosRankSum=-0.921;SOR=1.863 GT:AD:DP:GQ:PL 0/1:2,6:8:59:227,0,59 chr2 111997669 . G C 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=-0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:104,0,68 chr2 112003792 . G A 989.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.991;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.03;ReadPosRankSum=1.142;SOR=0.634 GT:AD:DP:GQ:PL 0/1:19,33:52:99:1018,0,603 chr2 112004076 . C G 691.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.970;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=5.064;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.56;ReadPosRankSum=1.444;SOR=1.646 GT:AD:DP:GQ:PL 0/1:29,22:51:99:720,0,783 chr2 112008396 . A G 1896.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.881;ClippingRankSum=0.000;DP=154;ExcessHet=3.0103;FS=1.317;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=0.188;SOR=0.841 GT:AD:DP:GQ:PL 0/1:79,75:154:99:1925,0,2158 chr2 112008685 . A G 853.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.577;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.889;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.20;ReadPosRankSum=-1.396;SOR=0.818 GT:AD:DP:GQ:PL 0/1:38,32:70:99:882,0,1134 chr2 112013193 . A G 1687.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.238;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=2.195;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=0.186;SOR=0.505 GT:AD:DP:GQ:PL 0/1:68,69:137:99:1716,0,1767 chr2 112013221 . T C 1673.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.000;ClippingRankSum=0.000;DP=145;ExcessHet=3.0103;FS=2.942;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.54;ReadPosRankSum=0.338;SOR=0.589 GT:AD:DP:GQ:PL 0/1:73,72:145:99:1702,0,1816 chr2 112015789 . A G 74.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.751;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.48;ReadPosRankSum=1.465;SOR=0.368 GT:AD:DP:GQ:PL 0/1:6,4:10:99:103,0,191 chr2 112019149 . A G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.674;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 112022155 . G T 1415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.575;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=10.705;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.70;ReadPosRankSum=-2.508;SOR=2.125 GT:AD:DP:GQ:PL 0/1:36,44:80:99:1444,0,1047 chr2 112028198 . T C 340.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.164;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.516;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.52;ReadPosRankSum=-0.264;SOR=0.385 GT:AD:DP:GQ:PL 0/1:25,15:40:99:369,0,775 chr2 112028457 . C T 2819.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.947;ClippingRankSum=0.000;DP=238;ExcessHet=3.0103;FS=1.603;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.85;ReadPosRankSum=-0.076;SOR=0.567 GT:AD:DP:GQ:PL 0/1:131,107:238:99:2848,0,3833 chr2 112055613 . G C 498.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.25;ReadPosRankSum=-0.642;SOR=1.981 GT:AD:DP:GQ:PL 0/1:5,14:19:99:527,0,152 chr2 112055814 . C G 2253.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.65;SOR=0.920 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2282,228,0 chr2 112059881 . A T 1408.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1437,129,0 chr2 112064921 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 112065066 . C T 186.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:215,15,0 chr2 112068898 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:81,0,33 chr2 112068914 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:81,0,33 chr2 112068921 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:81,0,33 chr2 112075107 . G A 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.49;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 112085820 . G T 260.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.38;ReadPosRankSum=-0.792;SOR=0.818 GT:AD:DP:GQ:PL 0/1:7,8:15:99:289,0,247 chr2 112089416 . A C 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-0.241;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,176 chr2 112089511 . A C 813.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.039;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.114;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.56;ReadPosRankSum=-1.089;SOR=0.495 GT:AD:DP:GQ:PL 0/1:29,31:60:99:842,0,837 chr2 112097354 . C G 286.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.020;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.95;ReadPosRankSum=-0.069;SOR=0.382 GT:AD:DP:GQ:PL 0/1:12,12:24:99:315,0,361 chr2 112098376 . C T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 112098588 . C A 1262.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.635;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=1.775;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.68;ReadPosRankSum=1.367;SOR=0.963 GT:AD:DP:GQ:PL 0/1:40,46:86:99:1291,0,959 chr2 112106250 . A G 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-0.241;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr2 112107940 . G C 1491.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.74;SOR=1.132 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1520,141,0 chr2 112113153 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 112138535 . C T 657.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.595;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.04;ReadPosRankSum=0.370;SOR=0.880 GT:AD:DP:GQ:PL 0/1:16,25:41:99:686,0,461 chr2 112159525 . G C 1474.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.178;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.967;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.20;ReadPosRankSum=-0.596;SOR=0.575 GT:AD:DP:GQ:PL 0/1:46,51:97:99:1503,0,1356 chr2 112181465 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 112181538 . T G 101.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:129,12,0 chr2 112181632 . G A 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-0.792;SOR=2.833 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,112 chr2 112185493 . C T 412.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.990;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.64;ReadPosRankSum=-0.466;SOR=0.507 GT:AD:DP:GQ:PL 0/1:7,13:20:99:441,0,232 chr2 112187611 . T A 1537.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.032;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=0.911;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.98;ReadPosRankSum=-0.611;SOR=0.552 GT:AD:DP:GQ:PL 0/1:56,54:110:99:1566,0,1641 chr2 112187643 . G A 1230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.933;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=4.562;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.58;ReadPosRankSum=0.671;SOR=1.802 GT:AD:DP:GQ:PL 0/1:34,36:70:99:1259,0,1141 chr2 112238233 . A G 157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.605;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.34;ReadPosRankSum=0.205;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:186,0,176 chr2 112239853 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 112250180 . C T 220.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.111;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.03;ReadPosRankSum=2.009;SOR=0.804 GT:AD:DP:GQ:PL 0/1:12,10:22:99:249,0,309 chr2 112290956 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 112319373 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 112321999 . C A 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.56;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 112331690 . T C 3274.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.89;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,106:106:99:3303,317,0 chr2 112332470 . T C 2794.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.40;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2823,267,0 chr2 112429772 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.44;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 112482256 . C T 1300.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.310;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=1.706;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.47;ReadPosRankSum=-0.343;SOR=0.410 GT:AD:DP:GQ:PL 0/1:40,39:79:99:1329,0,1332 chr2 112482606 . T C 1235.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.555;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=13.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.23;ReadPosRankSum=0.598;SOR=3.486 GT:AD:DP:GQ:PL 0/1:71,39:110:99:1264,0,2369 chr2 112485744 . G A 439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.121;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.154;SOR=0.770 GT:AD:DP:GQ:PL 0/1:12,13:25:99:468,0,394 chr2 112497062 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.68;MQRankSum=-0.319;QD=12.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 112501094 . G A 609.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.999;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=8.921;MLEAC=1;MLEAF=0.500;MQ=50.90;MQRankSum=-3.946;QD=20.33;ReadPosRankSum=-0.646;SOR=3.258 GT:AD:DP:GQ:PL 0/1:12,18:30:99:638,0,343 chr2 112501339 . C T 750.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.760;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=1.332;MLEAC=1;MLEAF=0.500;MQ=49.53;MQRankSum=-4.990;QD=14.72;ReadPosRankSum=-1.331;SOR=1.097 GT:AD:DP:GQ:PL 0/1:24,27:51:99:779,0,724 chr2 112503284 . T G 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-0.854;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr2 112518955 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 112520071 . C G 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=0.589;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,140 chr2 112528985 . A G 553.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.57;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:582,45,0 chr2 112530387 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 112542706 . C G 2293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.439;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.50;ReadPosRankSum=0.145;SOR=0.678 GT:AD:DP:GQ:PL 0/1:64,75:139:99:2322,0,2046 chr2 112542753 . G A 2340.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.30;SOR=4.875 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2369,180,0 chr2 112542817 . A C 443.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.055;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.36;ReadPosRankSum=-0.578;SOR=0.627 GT:AD:DP:GQ:PL 0/1:4,15:19:99:472,0,110 chr2 112545834 . C T 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.328;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=-0.792;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:97:109,0,97 chr2 112545886 . T C 142.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.113;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.187;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.52;ReadPosRankSum=0.949;SOR=1.371 GT:AD:DP:GQ:PL 0/1:9,6:15:99:171,0,229 chr2 112547573 . G C 1128.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.472;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=1.597;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.75;ReadPosRankSum=-0.822;SOR=0.515 GT:AD:DP:GQ:PL 0/1:59,46:105:99:1157,0,2343 chr2 112547580 . G A 1601.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.376;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=2.558;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.40;ReadPosRankSum=1.219;SOR=0.978 GT:AD:DP:GQ:PL 0/1:46,58:104:99:1630,0,1721 chr2 112549250 . A G 1899.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.714;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=4.041;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.66;ReadPosRankSum=-0.545;SOR=1.197 GT:AD:DP:GQ:PL 0/1:45,69:114:99:1928,0,1197 chr2 112549538 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr2 112550939 . T A 1207.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.851;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=5.380;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.27;ReadPosRankSum=-1.151;SOR=1.274 GT:AD:DP:GQ:PL 0/1:45,46:91:99:1236,0,1061 chr2 112551045 . C T 534.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.010;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=6.463;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=1.110;SOR=2.658 GT:AD:DP:GQ:PL 0/1:15,16:31:99:563,0,453 chr2 112551896 . C T 1609.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.115;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=0.608;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.03;ReadPosRankSum=-0.380;SOR=0.760 GT:AD:DP:GQ:PL 0/1:78,68:146:99:1638,0,1783 chr2 112552966 . G A 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.105;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.83;ReadPosRankSum=-1.121;SOR=1.609 GT:AD:DP:GQ:PL 0/1:7,6:13:99:208,0,219 chr2 112558226 . A C 77.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.55;ReadPosRankSum=1.036;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:64:106,0,64 chr2 112559776 . G A 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.842;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr2 112564018 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 112564323 . T C 2129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.491;ClippingRankSum=0.000;DP=167;ExcessHet=3.0103;FS=1.241;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.83;ReadPosRankSum=-0.525;SOR=0.824 GT:AD:DP:GQ:PL 0/1:91,75:166:99:2158,0,2677 chr2 112564769 . T G 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=1.111;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr2 112568704 . C G 1630.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.04;SOR=2.737 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1659,138,0 chr2 112568925 . C T 2463.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.75;SOR=2.271 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2492,219,0 chr2 112574844 . T C 1315.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.453;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=7.873;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.12;ReadPosRankSum=0.672;SOR=2.093 GT:AD:DP:GQ:PL 0/1:46,41:87:99:1344,0,1339 chr2 112575833 . C T 182.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.06;ReadPosRankSum=1.105;SOR=0.569 GT:AD:DP:GQ:PL 0/1:7,6:13:99:211,0,253 chr2 112584474 . G T 394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.18;ReadPosRankSum=0.091;SOR=0.560 GT:AD:DP:GQ:PL 0/1:14,12:26:99:423,0,499 chr2 112585911 . A T 1476.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.616;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.93;ReadPosRankSum=-0.312;SOR=0.906 GT:AD:DP:GQ:PL 0/1:31,47:78:99:1505,0,920 chr2 112586470 . T C 5562.77 PASS AC=2;AF=1.00;AN=2;DP=165;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.71;SOR=1.638 GT:AD:DP:GQ:PL 1/1:0,165:165:99:5591,496,0 chr2 112588836 . C G 907.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.242;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.791;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.87;ReadPosRankSum=0.315;SOR=0.585 GT:AD:DP:GQ:PL 0/1:54,38:92:99:936,0,1460 chr2 112588903 . G A 976.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.995;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=3.036;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.50;ReadPosRankSum=-0.260;SOR=1.058 GT:AD:DP:GQ:PL 0/1:53,40:93:99:1005,0,1337 chr2 112588935 . A C 2530.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.24;SOR=2.642 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2559,243,0 chr2 112597743 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 112599806 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 112602833 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 112602834 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 112602835 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 112614405 . T A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 112647131 . G A 2726.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.667;ClippingRankSum=0.000;DP=206;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.30;ReadPosRankSum=0.648;SOR=0.717 GT:AD:DP:GQ:PL 0/1:97,108:205:99:2755,0,2606 chr2 112647859 . G C 651.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.055;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=1.402;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.81;ReadPosRankSum=1.419;SOR=0.412 GT:AD:DP:GQ:PL 0/1:21,23:44:99:680,0,606 chr2 112647906 . C T 576.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.689;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.18;ReadPosRankSum=0.680;SOR=0.334 GT:AD:DP:GQ:PL 0/1:8,18:26:99:605,0,242 chr2 112652438 . A G 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=-0.272;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr2 112657409 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 112659989 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 112678117 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 112703687 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=1.383;SOR=2.209 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr2 112721312 . A G 1541.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.08;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1570,120,0 chr2 112722037 . G A 9162.77 PASS AC=2;AF=1.00;AN=2;DP=279;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.84;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,279:279:99:9191,836,0 chr2 112722914 . T C 1726.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.06;SOR=0.968 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1755,117,0 chr2 112723862 . T A 4134.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=0.872;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.32;ReadPosRankSum=-0.684;SOR=1.035 GT:AD:DP:GQ:PL 1/1:1,131:132:99:4163,356,0 chr2 112723970 . A G 3365.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.20;SOR=1.464 GT:AD:DP:GQ:PL 1/1:0,94:94:99:3394,283,0 chr2 112725202 . A C 10525.77 PASS AC=2;AF=1.00;AN=2;DP=323;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.59;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,323:323:99:10554,968,0 chr2 112726742 . G A 11471.77 PASS AC=2;AF=1.00;AN=2;DP=362;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.69;SOR=1.036 GT:AD:DP:GQ:PL 1/1:0,362:362:99:11500,1086,0 chr2 112726776 . A G 7305.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.420;ClippingRankSum=0.000;DP=273;ExcessHet=3.0103;FS=2.697;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.10;ReadPosRankSum=0.123;SOR=1.713 GT:AD:DP:GQ:PL 1/1:2,258:260:99:7334,715,0 chr2 112726864 . T G 3246.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.92;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,82:82:99:3275,247,0 chr2 112738208 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 112738876 . G A 1492.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.105;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=0.831;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.49;ReadPosRankSum=1.112;SOR=0.594 GT:AD:DP:GQ:PL 0/1:48,55:103:99:1521,0,1370 chr2 112746253 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 112756248 . T C 4813.77 PASS AC=2;AF=1.00;AN=2;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.43;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,144:144:99:4842,432,0 chr2 112775308 . G T 3503.77 PASS AC=2;AF=1.00;AN=2;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.03;SOR=2.632 GT:AD:DP:GQ:PL 1/1:0,99:99:99:3532,297,0 chr2 112777818 . G T 1688.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.59;SOR=2.560 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1717,141,0 chr2 112777861 . C T 1291.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.360;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=2.201;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.00;ReadPosRankSum=-1.221;SOR=1.140 GT:AD:DP:GQ:PL 0/1:31,45:76:99:1320,0,829 chr2 112779646 . C A 1202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.836;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=1.022;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.85;ReadPosRankSum=-0.257;SOR=0.873 GT:AD:DP:GQ:PL 0/1:40,41:81:99:1231,0,1130 chr2 112779762 . A G 214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.48;ReadPosRankSum=-0.308;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,7:10:95:243,0,95 chr2 112781202 . G A 59.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.00;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:87,6,0 chr2 112781205 . G A 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr2 112782395 . G A 146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=-0.303;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:175,0,218 chr2 112782507 . G A 1556.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.52;SOR=1.314 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1585,153,0 chr2 112782600 . C T 1280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.649;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=8.035;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.31;ReadPosRankSum=-0.288;SOR=1.107 GT:AD:DP:GQ:PL 0/1:30,44:74:99:1309,0,860 chr2 112782628 . G T 2770.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.21;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2799,243,0 chr2 112831216 . C T 578.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.692;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=6.255;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.34;ReadPosRankSum=0.110;SOR=1.946 GT:AD:DP:GQ:PL 0/1:35,21:56:99:607,0,1090 chr2 112832813 . G A 1780.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.257;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=2.266;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.45;ReadPosRankSum=-0.752;SOR=0.478 GT:AD:DP:GQ:PL 0/1:73,70:143:99:1809,0,2036 chr2 112838245 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 112838252 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 112856180 . C G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 112913726 . T C 2737.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.94;SOR=1.833 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2766,231,0 chr2 112913801 . G T 4212.77 PASS AC=2;AF=1.00;AN=2;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.98;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,136:136:99:4241,408,0 chr2 112913833 . A G 3900.77 PASS AC=2;AF=1.00;AN=2;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.47;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,128:128:99:3929,383,0 chr2 112913941 . G A 1608.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.59;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1637,120,0 chr2 112914932 . A C 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.95;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 112917503 . A G 1148.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.47;SOR=4.548 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1177,90,0 chr2 112918382 . G T 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.41;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 112931292 . G A 346.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.70;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:375,27,0 chr2 112931308 . G T 601.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.68;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,14:14:42:630,42,0 chr2 112931317 . C T 700.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.87;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,18:18:54:729,54,0 chr2 112931646 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 112932773 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 112933084 . G A 281.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.64;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:310,24,0 chr2 112933483 . T C 1321.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.68;SOR=3.797 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1350,108,0 chr2 112949535 . G C 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.31;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr2 112949537 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 112981378 . C T 119.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.970;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=5.167;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.05;ReadPosRankSum=0.000;SOR=2.276 GT:AD:DP:GQ:PL 0/1:11,6:17:99:148,0,272 chr2 112985157 . G A 691.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.08;SOR=1.708 GT:AD:DP:GQ:PL 1/1:0,23:23:69:720,69,0 chr2 113005886 . A C 1757.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.784;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=5.213;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.07;ReadPosRankSum=-0.483;SOR=0.334 GT:AD:DP:GQ:PL 0/1:44,59:103:99:1786,0,1152 chr2 113005998 . A G 3602.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.17;SOR=0.927 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3631,336,0 chr2 113006842 . T C 518.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.419;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=4.030;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=0.393;SOR=0.094 GT:AD:DP:GQ:PL 0/1:26,17:43:99:547,0,913 chr2 113008818 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 113008819 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 113025993 . C T 752.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.601;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=2.869;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.35;ReadPosRankSum=-0.375;SOR=0.214 GT:AD:DP:GQ:PL 0/1:14,23:37:99:781,0,473 chr2 113026332 . A T 2972.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.57;SOR=2.780 GT:AD:DP:GQ:PL 1/1:0,86:86:99:3001,258,0 chr2 113027225 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 113027443 . A G 577.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.595;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.51;ReadPosRankSum=0.267;SOR=0.892 GT:AD:DP:GQ:PL 0/1:15,18:33:99:606,0,527 chr2 113027625 . G A 2407.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.095;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=0.585;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.77;ReadPosRankSum=-1.651;SOR=0.795 GT:AD:DP:GQ:PL 0/1:69,94:163:99:2436,0,1946 chr2 113028150 . A G 1497.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.40;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1526,120,0 chr2 113028265 . G C 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.46;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 113029256 . C G 784.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.18;SOR=1.697 GT:AD:DP:GQ:PL 1/1:0,26:26:78:813,78,0 chr2 113031013 . C G 772.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.507;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=3.101;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.30;ReadPosRankSum=-0.756;SOR=0.409 GT:AD:DP:GQ:PL 0/1:39,36:75:99:801,0,995 chr2 113031440 . C A 30.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:58,6,0 chr2 113031592 . C A 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-0.792;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr2 113031739 . C T 535.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.234;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.088;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.72;ReadPosRankSum=0.502;SOR=0.917 GT:AD:DP:GQ:PL 0/1:28,22:50:99:564,0,679 chr2 113043573 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 113043574 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 113059363 . C G 1413.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.183;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.46;ReadPosRankSum=1.071;SOR=0.640 GT:AD:DP:GQ:PL 0/1:67,38:105:99:1442,0,3685 chr2 113059365 . A C 1413.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.989;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=1.661;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.09;ReadPosRankSum=0.712;SOR=0.511 GT:AD:DP:GQ:PL 0/1:68,40:108:99:1442,0,3685 chr2 113059604 . C T 1093.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=5.211 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1122,81,0 chr2 113059691 . T C 176.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:205,15,0 chr2 113060543 . G T 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr2 113060594 . G A 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.81;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 113061055 . G A 4738.77 PASS AC=2;AF=1.00;AN=2;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.34;SOR=2.682 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4767,402,0 chr2 113061125 . G C 1659.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.71;SOR=4.664 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1688,129,0 chr2 113061150 . A G 984.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.25;SOR=3.690 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1013,81,0 chr2 113061161 . G A 851.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.20;SOR=4.003 GT:AD:DP:GQ:PL 1/1:0,23:23:69:880,69,0 chr2 113061862 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 113061874 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 113061959 . A G 1022.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.30;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1051,78,0 chr2 113062037 . T C 3250.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.86;SOR=1.896 GT:AD:DP:GQ:PL 1/1:0,96:96:99:3279,288,0 chr2 113062899 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 113067127 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 113067263 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 113072624 . T G 3997.77 PASS AC=2;AF=1.00;AN=2;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.13;SOR=3.077 GT:AD:DP:GQ:PL 1/1:0,109:109:99:4026,328,0 chr2 113072986 . G A 2251.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.61;SOR=2.338 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2280,201,0 chr2 113073005 . A C 1490.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.20;SOR=4.021 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1519,120,0 chr2 113073111 . G A 262.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.11;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:291,21,0 chr2 113074735 . T C 1606.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.794;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=3.421;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.39;ReadPosRankSum=0.163;SOR=0.435 GT:AD:DP:GQ:PL 0/1:58,62:120:99:1635,0,1583 chr2 113074756 . C A 1414.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.587;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.773;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.15;ReadPosRankSum=-0.673;SOR=0.593 GT:AD:DP:GQ:PL 0/1:49,51:100:99:1443,0,1337 chr2 113075404 . C T 1704.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.653;ClippingRankSum=0.000;DP=169;ExcessHet=3.0103;FS=3.774;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.09;ReadPosRankSum=0.337;SOR=0.994 GT:AD:DP:GQ:PL 0/1:103,66:169:99:1733,0,2694 chr2 113078114 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 113078331 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 113078342 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 113117851 . G A 74.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.48;ReadPosRankSum=0.084;SOR=0.368 GT:AD:DP:GQ:PL 0/1:6,4:10:99:103,0,186 chr2 113117932 . G A 151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.363;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.84;ReadPosRankSum=-0.083;SOR=1.022 GT:AD:DP:GQ:PL 0/1:18,8:26:99:180,0,572 chr2 113117988 . A G 826.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.142;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=1.131;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.21;ReadPosRankSum=-1.657;SOR=0.922 GT:AD:DP:GQ:PL 0/1:28,23:51:99:855,0,1164 chr2 113118007 . G C 1104.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.177;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.74;ReadPosRankSum=-0.630;SOR=0.776 GT:AD:DP:GQ:PL 0/1:35,31:66:99:1133,0,1316 chr2 113118054 . T C 906.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.075;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.833;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.19;ReadPosRankSum=3.015;SOR=0.578 GT:AD:DP:GQ:PL 0/1:43,38:81:99:935,0,1166 chr2 113118176 . C G 685.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.121;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.109;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.43;ReadPosRankSum=0.595;SOR=1.008 GT:AD:DP:GQ:PL 0/1:39,21:60:99:714,0,1946 chr2 113118196 . A G 571.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.335;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.17;ReadPosRankSum=2.370;SOR=0.693 GT:AD:DP:GQ:PL 0/1:31,16:47:99:600,0,1737 chr2 113119836 . G T 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=1.611;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr2 113119918 . G T 1088.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.22;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1117,90,0 chr2 113119961 . G C 647.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.157;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=2.475;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.36;ReadPosRankSum=0.059;SOR=0.375 GT:AD:DP:GQ:PL 0/1:31,26:57:99:676,0,850 chr2 113120136 . A C 437.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.449;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=5.436;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.42;ReadPosRankSum=0.433;SOR=1.688 GT:AD:DP:GQ:PL 0/1:27,15:42:99:466,0,763 chr2 113121138 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 113129630 . T C 1054.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.434;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.41;ReadPosRankSum=0.571;SOR=0.665 GT:AD:DP:GQ:PL 0/1:44,41:85:99:1083,0,1199 chr2 113129685 . C T 859.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.307;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=5.025;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.28;ReadPosRankSum=-1.185;SOR=1.329 GT:AD:DP:GQ:PL 0/1:38,32:70:99:888,0,1070 chr2 113129696 . G A 770.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.713;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=4.237;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.43;ReadPosRankSum=-1.267;SOR=1.410 GT:AD:DP:GQ:PL 0/1:34,28:62:99:799,0,1054 chr2 113129717 . G C 481.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.941;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=8.001;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.95;ReadPosRankSum=0.545;SOR=2.184 GT:AD:DP:GQ:PL 0/1:27,17:44:99:510,0,823 chr2 113129761 . A C 372.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.761;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=5.932;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.43;ReadPosRankSum=-0.414;SOR=2.448 GT:AD:DP:GQ:PL 0/1:18,12:30:99:401,0,593 chr2 113130888 . A G 1107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.643;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=3.489;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.29;ReadPosRankSum=0.218;SOR=0.324 GT:AD:DP:GQ:PL 0/1:38,30:68:99:1136,0,2181 chr2 113130893 . C G 1110.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.524;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=3.397;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.10;ReadPosRankSum=0.551;SOR=0.368 GT:AD:DP:GQ:PL 0/1:39,30:69:99:1139,0,2159 chr2 113130980 . G A 2127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.775;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=1.496;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.16;ReadPosRankSum=2.113;SOR=0.529 GT:AD:DP:GQ:PL 0/1:67,57:124:99:2156,0,3868 chr2 113131002 . T C 2223.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.178;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.682;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.85;ReadPosRankSum=0.021;SOR=0.814 GT:AD:DP:GQ:PL 0/1:72,60:132:99:2252,0,4061 chr2 113131216 . A T 1766.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.054;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=1.391;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.18;ReadPosRankSum=0.116;SOR=0.864 GT:AD:DP:GQ:PL 0/1:65,69:134:99:1795,0,1878 chr2 113131323 . T A 591.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.095;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.96;ReadPosRankSum=-0.399;SOR=0.773 GT:AD:DP:GQ:PL 0/1:32,22:54:99:620,0,966 chr2 113131429 . T G 99.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.396;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.67;ReadPosRankSum=-1.087;SOR=0.223 GT:AD:DP:GQ:PL 0/1:9,4:13:99:128,0,305 chr2 113132186 . C G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 113132426 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 113132727 . T C 4056.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.464;ClippingRankSum=0.000;DP=290;ExcessHet=3.0103;FS=9.019;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.04;ReadPosRankSum=-0.117;SOR=0.592 GT:AD:DP:GQ:PL 0/1:137,152:289:99:4085,0,3801 chr2 113133009 . C G 553.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.154;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=3.144;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.29;ReadPosRankSum=-1.016;SOR=2.517 GT:AD:DP:GQ:PL 0/1:17,17:34:99:582,0,572 chr2 113137658 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 113137728 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 113160900 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 113162419 . G A 31.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0 chr2 113167161 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 113183104 . T C 3365.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.160;ClippingRankSum=0.000;DP=239;ExcessHet=3.0103;FS=3.579;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.08;ReadPosRankSum=-0.082;SOR=0.506 GT:AD:DP:GQ:PL 0/1:123,116:239:99:3394,0,3678 chr2 113183262 . G C 4193.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.195;ClippingRankSum=0.000;DP=417;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.06;ReadPosRankSum=0.889;SOR=0.684 GT:AD:DP:GQ:PL 0/1:249,168:417:99:4222,0,6620 chr2 113185326 . A C 1255.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.309;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=1.026;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.47;ReadPosRankSum=0.524;SOR=0.551 GT:AD:DP:GQ:PL 0/1:26,42:68:99:1284,0,782 chr2 113185893 . A G 1502.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.105;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=2.384;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-1.863;SOR=0.935 GT:AD:DP:GQ:PL 0/1:69,52:121:99:1531,0,1870 chr2 113187253 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 113192159 . A G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.12;MQRankSum=-1.383;QD=10.69;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 113192706 . T C 686.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.183;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=7.202;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.08;ReadPosRankSum=-0.948;SOR=2.925 GT:AD:DP:GQ:PL 0/1:16,20:36:99:715,0,450 chr2 113193394 . G A 1634.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.252;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=1.456;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.74;ReadPosRankSum=-0.323;SOR=0.859 GT:AD:DP:GQ:PL 0/1:56,63:119:99:1663,0,1552 chr2 113195824 . A G 3200.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3229,300,0 chr2 113196080 . A C 8461.77 PASS AC=2;AF=1.00;AN=2;DP=259;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.67;SOR=1.375 GT:AD:DP:GQ:PL 1/1:0,259:259:99:8490,778,0 chr2 113196375 . T C 3543.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.25;SOR=2.655 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3572,301,0 chr2 113196429 . A G 1524.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.26;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1553,120,0 chr2 113196919 . T A 40.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:68,6,0 chr2 113197302 . A C 5917.77 PASS AC=2;AF=1.00;AN=2;DP=183;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.52;SOR=1.046 GT:AD:DP:GQ:PL 1/1:0,182:182:99:5946,546,0 chr2 113197497 . G A 14051.77 PASS AC=2;AF=1.00;AN=2;DP=421;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.38;SOR=0.965 GT:AD:DP:GQ:PL 1/1:0,421:421:99:14080,1263,0 chr2 113198794 . G C 7372.77 PASS AC=2;AF=1.00;AN=2;DP=220;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.51;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,220:220:99:7401,660,0 chr2 113199244 . C G 2927.77 PASS AC=2;AF=1.00;AN=2;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.65;SOR=1.583 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2956,261,0 chr2 113199471 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 113212371 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 113215594 . G A 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr2 113216224 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 113216387 . T C 111.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:140,15,0 chr2 113220285 . T G 802.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.60;SOR=4.712 GT:AD:DP:GQ:PL 1/1:0,21:21:63:831,63,0 chr2 113220359 . C T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.38;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 113236840 . G T 1978.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.12;SOR=2.468 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2007,174,0 chr2 113236933 . A G 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.07;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 113242881 . C A 3167.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.32;SOR=1.945 GT:AD:DP:GQ:PL 1/1:0,98:98:99:3196,294,0 chr2 113244344 . A G 585.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.731;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.92;ReadPosRankSum=1.652;SOR=1.220 GT:AD:DP:GQ:PL 0/1:11,17:28:99:614,0,369 chr2 113246660 . G A 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.45;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 113263271 . T G 1453.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.61;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1482,126,0 chr2 113288152 . A G 141.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.59;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:169,12,0 chr2 113288154 . G C 141.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:169,12,0 chr2 113288171 . G C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.94;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 113288174 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.60;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 113288179 . C T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.55;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 113288196 . C G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 113345137 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 113348749 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 113348758 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 113388749 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 113388836 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 113582856 . A G 534.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.050;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=3.638;MLEAC=1;MLEAF=0.500;MQ=48.85;MQRankSum=-4.249;QD=18.44;ReadPosRankSum=1.105;SOR=1.508 GT:AD:DP:GQ:PL 0/1:11,18:29:99:563,0,236 chr2 113582877 . G A 305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.318;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=1.489;MLEAC=1;MLEAF=0.500;MQ=47.63;MQRankSum=-3.099;QD=9.27;ReadPosRankSum=0.230;SOR=1.022 GT:AD:DP:GQ:PL 0/1:21,12:33:99:334,0,573 chr2 113582917 . G A 286.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.101;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.11;MQRankSum=-2.217;QD=7.75;ReadPosRankSum=0.839;SOR=0.929 GT:AD:DP:GQ:PL 0/1:25,12:37:99:315,0,803 chr2 113583051 . C T 428.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.109;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=3.365;MLEAC=1;MLEAF=0.500;MQ=53.62;MQRankSum=-1.938;QD=5.10;ReadPosRankSum=-2.469;SOR=0.511 GT:AD:DP:GQ:PL 0/1:61,23:84:99:457,0,1688 chr2 113583086 . G A 1428.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.394;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=4.537;MLEAC=1;MLEAF=0.500;MQ=50.00;MQRankSum=-6.963;QD=19.31;ReadPosRankSum=0.227;SOR=0.794 GT:AD:DP:GQ:PL 0/1:35,39:74:99:1457,0,1389 chr2 113583100 . C A 1329.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.142;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=6.036;MLEAC=1;MLEAF=0.500;MQ=49.72;MQRankSum=-7.163;QD=18.47;ReadPosRankSum=1.398;SOR=1.060 GT:AD:DP:GQ:PL 0/1:37,35:72:99:1358,0,1364 chr2 113583129 . A G 760.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.402;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=3.703;MLEAC=1;MLEAF=0.500;MQ=48.00;MQRankSum=-7.146;QD=12.47;ReadPosRankSum=-0.123;SOR=1.246 GT:AD:DP:GQ:PL 0/1:30,31:61:99:789,0,797 chr2 113583639 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.05;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 113583652 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.30;MQRankSum=-0.319;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 113583666 . T G 107.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.30;QD=30.11;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 113583670 . T G 107.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.30;QD=33.14;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 113583703 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.71;MQRankSum=-1.718;QD=7.11;ReadPosRankSum=0.328;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,4:7:70:78,0,70 chr2 113587279 . A C 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.35;QD=23.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr2 113587427 . T C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.95;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=0.000;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:72:78,0,72 chr2 113587449 . A G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.95;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=-1.383;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,161 chr2 113591353 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=43.40;MQRankSum=0.967;QD=17.59;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:58:81,0,58 chr2 113591601 . G A 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.645;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.92;MQRankSum=1.645;QD=16.35;ReadPosRankSum=0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:75:110,0,75 chr2 113591646 . C G 84.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=45.17;MQRankSum=1.150;QD=21.21;ReadPosRankSum=1.150;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:18:113,0,18 chr2 113591673 . G A 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.69;MQRankSum=0.967;QD=15.26;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr2 113595229 . T C 460.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.144;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=9.658;MLEAC=1;MLEAF=0.500;MQ=40.32;MQRankSum=-1.091;QD=9.80;ReadPosRankSum=1.268;SOR=0.622 GT:AD:DP:GQ:PL 0/1:33,14:47:99:489,0,1247 chr2 113595243 . C T 472.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.503;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=10.086;MLEAC=1;MLEAF=0.500;MQ=41.00;MQRankSum=-1.332;QD=11.26;ReadPosRankSum=0.267;SOR=0.608 GT:AD:DP:GQ:PL 0/1:28,14:42:99:501,0,1142 chr2 113595277 . G A 202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.196;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=1.619;MLEAC=1;MLEAF=0.500;MQ=42.58;MQRankSum=-0.557;QD=7.24;ReadPosRankSum=2.737;SOR=1.302 GT:AD:DP:GQ:PL 0/1:18,10:28:99:231,0,466 chr2 113595774 . C T 469.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.925;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=17.469;MLEAC=1;MLEAF=0.500;MQ=40.28;MQRankSum=3.631;QD=4.27;ReadPosRankSum=-0.239;SOR=0.109 GT:AD:DP:GQ:PL 0/1:81,29:110:99:498,0,2001 chr2 113595822 . T G 174.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.912;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=28.048;MLEAC=1;MLEAF=0.500;MQ=50.32;MQRankSum=-6.284;QD=2.53;ReadPosRankSum=2.553;SOR=4.831 GT:AD:DP:GQ:PL 0/1:54,15:69:99:203,0,1495 chr2 113596058 . A G 273.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.002;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=14.150;MLEAC=1;MLEAF=0.500;MQ=52.79;MQRankSum=-0.558;QD=6.68;ReadPosRankSum=0.646;SOR=2.461 GT:AD:DP:GQ:PL 0/1:30,11:41:99:302,0,857 chr2 113598163 . G A 31.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=42.10;MQRankSum=2.100;QD=3.97;ReadPosRankSum=0.000;SOR=1.445 GT:AD:DP:GQ:PL 0/1:6,2:8:60:60,0,145 chr2 113598482 . G A 519.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.513;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=1.606;MLEAC=1;MLEAF=0.500;MQ=40.35;MQRankSum=1.057;QD=3.74;ReadPosRankSum=0.270;SOR=0.771 GT:AD:DP:GQ:PL 0/1:107,32:139:99:548,0,3063 chr2 113599773 . T C 355.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.128;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=4.925;MLEAC=1;MLEAF=0.500;MQ=42.34;MQRankSum=-2.175;QD=14.23;ReadPosRankSum=0.749;SOR=0.105 GT:AD:DP:GQ:PL 0/1:12,13:25:99:384,0,378 chr2 113600860 . C T 217.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.409;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=2.105;MLEAC=1;MLEAF=0.500;MQ=46.23;MQRankSum=-1.442;QD=9.90;SOR=1.536 GT:AD:DP:GQ:PL 0/1:15,7:22:99:246,0,1824 chr2 113601195 . G A 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.170;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=5.093;MLEAC=1;MLEAF=0.500;MQ=43.63;MQRankSum=1.651;QD=7.99;ReadPosRankSum=0.377;SOR=1.609 GT:AD:DP:GQ:PL 0/1:20,13:33:99:292,0,435 chr2 113601493 . G A 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=50.30;MQRankSum=-0.191;QD=9.62;ReadPosRankSum=0.473;SOR=1.981 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,255 chr2 113627627 . T C 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.42;QD=26.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr2 113628761 . G A 776.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.424;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=7.735;MLEAC=1;MLEAF=0.500;MQ=48.52;MQRankSum=1.248;QD=9.83;ReadPosRankSum=-0.193;SOR=0.571 GT:AD:DP:GQ:PL 0/1:46,33:79:99:805,0,1188 chr2 113628884 . T C 1012.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.617;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.07;MQRankSum=0.063;QD=17.77;ReadPosRankSum=0.448;SOR=0.884 GT:AD:DP:GQ:PL 0/1:26,31:57:99:1041,0,871 chr2 113629942 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 113630330 . C T 2538.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.253;ClippingRankSum=0.000;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.88;MQRankSum=-5.798;QD=14.93;ReadPosRankSum=-1.662;SOR=0.663 GT:AD:DP:GQ:PL 0/1:73,97:170:99:2567,0,1810 chr2 113630373 . G A 1608.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.094;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.85;MQRankSum=-5.559;QD=16.09;ReadPosRankSum=0.117;SOR=0.655 GT:AD:DP:GQ:PL 0/1:44,56:100:99:1637,0,1221 chr2 113634144 . T C 4872.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.622;ClippingRankSum=0.000;DP=390;ExcessHet=3.0103;FS=0.768;MLEAC=1;MLEAF=0.500;MQ=51.89;MQRankSum=0.201;QD=12.49;ReadPosRankSum=0.470;SOR=0.748 GT:AD:DP:GQ:PL 0/1:199,191:390:99:4901,0,4964 chr2 113635139 . C T 3315.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.129;ClippingRankSum=0.000;DP=272;ExcessHet=3.0103;FS=0.992;MLEAC=1;MLEAF=0.500;MQ=48.36;MQRankSum=0.848;QD=12.19;ReadPosRankSum=-0.305;SOR=0.626 GT:AD:DP:GQ:PL 0/1:147,125:272:99:3344,0,4190 chr2 113635637 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.15;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 113635655 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.61;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 113636968 . A G 56.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.15;QD=14.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:84,12,0 chr2 113641568 . G A 1325.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.249;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=1.301;MLEAC=1;MLEAF=0.500;MQ=56.28;MQRankSum=-0.254;QD=18.94;ReadPosRankSum=1.320;SOR=0.986 GT:AD:DP:GQ:PL 0/1:31,39:70:99:1354,0,1059 chr2 113642927 . C T 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.68;ReadPosRankSum=-0.150;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:125,0,221 chr2 113642949 . C T 344.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.340;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.24;ReadPosRankSum=-1.198;SOR=0.610 GT:AD:DP:GQ:PL 0/1:8,12:20:99:373,0,240 chr2 113668108 . G T 127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.25;ReadPosRankSum=0.328;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:156,0,195 chr2 113668513 . C T 4009.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.379;ClippingRankSum=0.000;DP=278;ExcessHet=3.0103;FS=2.800;MLEAC=1;MLEAF=0.500;MQ=53.57;MQRankSum=10.177;QD=14.42;ReadPosRankSum=1.335;SOR=0.543 GT:AD:DP:GQ:PL 0/1:130,148:278:99:4038,0,3209 chr2 113668538 . T C 4098.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.158;ClippingRankSum=0.000;DP=335;ExcessHet=3.0103;FS=5.025;MLEAC=1;MLEAF=0.500;MQ=55.54;MQRankSum=-10.565;QD=12.24;ReadPosRankSum=-1.352;SOR=0.950 GT:AD:DP:GQ:PL 0/1:171,164:335:99:4127,0,4529 chr2 113718075 . C G 355.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.39;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:384,30,0 chr2 113723304 . A G 197.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.249;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.99;ReadPosRankSum=0.136;SOR=0.368 GT:AD:DP:GQ:PL 0/1:11,7:18:99:226,0,393 chr2 113729330 . T C 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=1.292;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr2 113729758 . T C 96.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:124,9,0 chr2 113734558 . C T 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.962;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.63;ReadPosRankSum=0.336;SOR=0.743 GT:AD:DP:GQ:PL 0/1:13,9:22:99:174,0,375 chr2 113735947 . C T 140.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.521;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=2.171;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.80;ReadPosRankSum=-1.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:10,6:16:99:169,0,236 chr2 113743535 . C T 812.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.044;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.78;ReadPosRankSum=-0.889;SOR=0.569 GT:AD:DP:GQ:PL 0/1:28,31:59:99:841,0,719 chr2 113743665 . T C 1056.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.360;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=1.639;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.57;ReadPosRankSum=0.035;SOR=0.929 GT:AD:DP:GQ:PL 0/1:56,44:100:99:1085,0,1499 chr2 113746053 . T G 172.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.80;ReadPosRankSum=0.080;SOR=0.340 GT:AD:DP:GQ:PL 0/1:10,6:16:99:201,0,370 chr2 113755809 . C T 1275.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.747;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.18;ReadPosRankSum=-2.644;SOR=0.746 GT:AD:DP:GQ:PL 0/1:46,44:90:99:1304,0,1217 chr2 113756210 . C G 1355.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.28;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1384,126,0 chr2 113756324 . C T 887.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.154;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.894;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.50;ReadPosRankSum=-0.835;SOR=0.757 GT:AD:DP:GQ:PL 0/1:35,36:71:99:916,0,862 chr2 113756521 . A C 498.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.991;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.78;ReadPosRankSum=1.525;SOR=0.495 GT:AD:DP:GQ:PL 0/1:5,19:24:98:527,0,98 chr2 113782693 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 113782696 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 113819974 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 113834800 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 113840451 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 113875768 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 113931490 . A G 274.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.825;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=1.971;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.49;ReadPosRankSum=-0.758;SOR=1.675 GT:AD:DP:GQ:PL 0/1:11,11:22:99:303,0,243 chr2 113951842 . G A 773.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.979;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.864;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.92;ReadPosRankSum=-0.306;SOR=0.534 GT:AD:DP:GQ:PL 0/1:41,37:78:99:802,0,1066 chr2 114008328 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 114439177 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 114442846 . C T 805.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.858;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.03;ReadPosRankSum=-0.790;SOR=0.634 GT:AD:DP:GQ:PL 0/1:33,34:67:99:834,0,941 chr2 114469371 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 114532292 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.13;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:90,6,0 chr2 114532294 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 114532296 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 114779214 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 114832261 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 114832308 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 115064664 . G C 1396.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.344;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=10.597;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.25;ReadPosRankSum=0.858;SOR=1.871 GT:AD:DP:GQ:PL 0/1:53,45:98:99:1425,0,1532 chr2 115087728 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 115099301 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 115130400 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 115162100 . C G 736.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.43;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:51:765,51,0 chr2 115162101 . T C 736.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.95;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:51:765,51,0 chr2 115342149 . A T 1989.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=1.888 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2018,186,0 chr2 115468733 . G A 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.28;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 115475684 . T C 107.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:135,12,0 chr2 115475753 . G A 73.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:101,12,0 chr2 115475816 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 115476391 . C A 237.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:266,24,0 chr2 115480091 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 115689701 . G A 806.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.94;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:835,60,0 chr2 115690030 . T C 1800.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.63;SOR=2.790 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1829,156,0 chr2 115713495 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 115715641 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 115739903 . A G 2892.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.68;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2921,246,0 chr2 115739952 . A G 1239.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.49;SOR=3.545 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1268,96,0 chr2 115746044 . A G 1753.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.84;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1782,150,0 chr2 115746095 . G A 2647.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.15;SOR=1.375 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2676,254,0 chr2 115762426 . A G 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.33;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 115768384 . G A 4928.77 PASS AC=2;AF=1.00;AN=2;DP=153;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.21;SOR=0.816 GT:AD:DP:GQ:PL 1/1:0,153:153:99:4957,459,0 chr2 115777510 . T C 385.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.50;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:30:414,30,0 chr2 115779504 . T C 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr2 115782335 . A G 3246.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.63;SOR=1.300 GT:AD:DP:GQ:PL 1/1:0,106:106:99:3275,317,0 chr2 115836116 . T A 860.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.331;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=6.416;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.22;ReadPosRankSum=0.720;SOR=0.208 GT:AD:DP:GQ:PL 0/1:19,31:50:99:889,0,528 chr2 115836119 . G T 1058.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.575;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=2.859;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.57;ReadPosRankSum=1.135;SOR=0.300 GT:AD:DP:GQ:PL 0/1:19,38:57:99:1096,0,403 chr2 115840855 . C T 1490.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.82;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1519,149,0 chr2 115840970 . G A 406.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.55;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:435,33,0 chr2 115842083 . A T 1048.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.78;SOR=1.751 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1077,99,0 chr2 115842351 . T C 2481.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.82;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2510,234,0 chr2 116039881 . C T 459.73 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.73;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,16:16:48:497,48,0 chr2 116497670 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 116497675 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 116497694 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 116669858 . A G 237.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:266,24,0 chr2 116822792 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 116822882 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 116861759 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 116970676 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 116970677 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 117318684 . C A 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.88;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr2 117318700 . A G 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.61;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr2 117319469 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 117718735 . C A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 117718844 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 117814895 . A C 1045.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.829;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.998;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.84;ReadPosRankSum=-1.664;SOR=0.894 GT:AD:DP:GQ:PL 0/1:28,38:66:99:1074,0,821 chr2 117817639 . C G 791.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.339;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=2.266;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.40;ReadPosRankSum=-1.169;SOR=0.922 GT:AD:DP:GQ:PL 0/1:25,30:55:99:820,0,641 chr2 117817892 . C T 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.602;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=4.393;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=-1.248;SOR=2.833 GT:AD:DP:GQ:PL 0/1:4,7:11:99:259,0,100 chr2 117826364 . C T 513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.083;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.17;ReadPosRankSum=0.804;SOR=0.941 GT:AD:DP:GQ:PL 0/1:20,19:39:99:542,0,582 chr2 117854250 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 117870838 . A G 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr2 117914641 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 117920340 . T C 6445.77 PASS AC=2;AF=1.00;AN=2;DP=206;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.29;SOR=0.713 GT:AD:DP:GQ:PL 1/1:0,206:206:99:6474,618,0 chr2 117922028 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 117930832 . T A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 117931178 . T C 1935.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.57;SOR=1.528 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1964,168,0 chr2 117935292 . T G 343.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.18;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:372,27,0 chr2 117935353 . G A 821.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.89;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,22:22:66:850,66,0 chr2 117936817 . C G 1427.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.45;SOR=1.364 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1456,132,0 chr2 117945214 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 117945376 . G C 1150.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.91;SOR=6.804 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1179,87,0 chr2 117946629 . T C 355.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.496;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.72;ReadPosRankSum=-0.736;SOR=0.610 GT:AD:DP:GQ:PL 0/1:6,13:19:99:384,0,128 chr2 117946902 . T G 1354.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.26;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1383,125,0 chr2 117947994 . A G 1527.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.51;SOR=2.352 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1556,141,0 chr2 117949303 . A G 2034.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.91;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2063,180,0 chr2 117958590 . C T 2280.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.04;SOR=2.200 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2309,201,0 chr2 117975399 . T C 3575.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.51;SOR=1.697 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3604,330,0 chr2 117977819 . G A 1647.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.63;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1676,146,0 chr2 117977893 . T C 1239.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.624;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=3.946;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.19;ReadPosRankSum=0.271;SOR=1.141 GT:AD:DP:GQ:PL 0/1:44,50:94:99:1268,0,1135 chr2 117986054 . G A 2222.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.44;SOR=1.058 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2251,241,0 chr2 118000634 . A G 142.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.90;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:170,12,0 chr2 118001178 . G T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 118006951 . T A 195.84 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.64;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:224,18,0 chr2 118008448 . A G 1254.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.56;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1283,101,0 chr2 118008873 . T C 321.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.18;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:30:350,30,0 chr2 118013990 . C A 5517.77 PASS AC=2;AF=1.00;AN=2;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.46;SOR=0.741 GT:AD:DP:GQ:PL 1/1:0,170:170:99:5546,510,0 chr2 118014087 . A G 4150.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.47;SOR=1.553 GT:AD:DP:GQ:PL 1/1:0,124:124:99:4179,372,0 chr2 118014296 . T C 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 118093015 . T G 1692.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=2.516;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.20;MQRankSum=1.551;QD=30.23;ReadPosRankSum=0.000;SOR=0.600 GT:AD:DP:GQ:PL 1/1:5,51:56:49:1721,49,0 chr2 118093588 . T G 880.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.43;QD=30.91;SOR=2.200 GT:AD:DP:GQ:PL 1/1:0,21:21:63:909,63,0 chr2 118093591 . T G 880.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.43;QD=32.45;SOR=2.200 GT:AD:DP:GQ:PL 1/1:0,21:21:63:909,63,0 chr2 118096228 . C T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 118108238 . G A 327.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.849;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.25;ReadPosRankSum=1.872;SOR=0.602 GT:AD:DP:GQ:PL 0/1:12,11:23:99:356,0,359 chr2 118194883 . T C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.93;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 118194886 . G T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.33;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 118220545 . T C 268.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.60;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:297,24,0 chr2 118262913 . T G 56.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=14.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:84,12,0 chr2 118362016 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 118457326 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 118536359 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 118718494 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 118782256 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 118788348 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 118794076 . A C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 118794172 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 118832540 . A C 197.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.26;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:226,21,0 chr2 118832712 . C T 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.933;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.80;ReadPosRankSum=0.938;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,6:11:99:125,0,143 chr2 118835401 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 118852263 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 118853220 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 118854102 . C T 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.834;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,81 chr2 118854189 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 118876384 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 118902158 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 118902159 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 118942520 . T C 956.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.061;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.40;ReadPosRankSum=-1.949;SOR=0.632 GT:AD:DP:GQ:PL 0/1:25,30:55:99:985,0,791 chr2 118969873 . A T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 118971300 . G A 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=1.282;SOR=0.132 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,107 chr2 118973947 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 118991901 . T G 1541.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.547;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=1.444;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=0.899;SOR=0.544 GT:AD:DP:GQ:PL 0/1:66,62:128:99:1570,0,1761 chr2 118992035 . C T 359.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.083;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.32;ReadPosRankSum=0.107;SOR=0.976 GT:AD:DP:GQ:PL 0/1:15,12:27:99:388,0,474 chr2 118992282 . A G 372.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.677;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.94;ReadPosRankSum=-0.672;SOR=0.892 GT:AD:DP:GQ:PL 0/1:10,12:22:99:401,0,305 chr2 119004139 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 119020382 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 119025967 . C G 346.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.081;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.76;ReadPosRankSum=2.596;SOR=0.724 GT:AD:DP:GQ:PL 0/1:9,13:22:99:375,0,270 chr2 119025991 . T G 387.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.377;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.36;ReadPosRankSum=-0.102;SOR=0.941 GT:AD:DP:GQ:PL 0/1:11,16:27:99:416,0,276 chr2 119053836 . G T 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr2 119073236 . G C 146.90 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 119076270 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 119096084 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 119141543 . C A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 119157413 . C T 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=0.000;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,176 chr2 119157673 . T C 3639.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.065;ClippingRankSum=0.000;DP=282;ExcessHet=3.0103;FS=1.991;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=0.216;SOR=0.833 GT:AD:DP:GQ:PL 0/1:142,139:281:99:3668,0,3781 chr2 119157933 . G T 824.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.130;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=6.966;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.78;ReadPosRankSum=0.042;SOR=1.665 GT:AD:DP:GQ:PL 0/1:41,29:70:99:853,0,1218 chr2 119158412 . A G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-1.036;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 119168805 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 119168951 . A G 94.98 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.74;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:13:123,0,13 chr2 119168974 . G A 164.84 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.97;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,5:5:15:201,15,0 chr2 119170701 . A G 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr2 119170795 . G T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 119181633 . G C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 119224189 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 119224429 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 119229778 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 119230989 . G A 10035.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.056;ClippingRankSum=0.000;DP=685;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.65;ReadPosRankSum=1.402;SOR=0.709 GT:AD:DP:GQ:PL 0/1:313,372:685:99:10064,0,8142 chr2 119232765 . A G 55.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:83,9,0 chr2 119246066 . C T 4505.77 PASS AC=2;AF=1.00;AN=2;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.13;SOR=1.294 GT:AD:DP:GQ:PL 1/1:0,132:132:99:4534,396,0 chr2 119246363 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 119247736 . G A 3047.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.499;ClippingRankSum=0.000;DP=230;ExcessHet=3.0103;FS=4.670;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.25;ReadPosRankSum=1.838;SOR=0.456 GT:AD:DP:GQ:PL 0/1:117,113:230:99:3076,0,3376 chr2 119257409 . A G 2764.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.37;SOR=8.439 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2793,202,0 chr2 119257621 . A T 5397.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.025;ClippingRankSum=0.000;DP=474;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.41;ReadPosRankSum=-0.161;SOR=0.688 GT:AD:DP:GQ:PL 0/1:257,216:473:99:5426,0,6749 chr2 119286451 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 119302412 . T C 2490.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.75;SOR=1.339 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2519,243,0 chr2 119302506 . T C 2300.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=1.457 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2329,221,0 chr2 119321202 . T C 2452.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.05;SOR=0.824 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2481,236,0 chr2 119367453 . A G 2573.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.43;SOR=1.079 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2602,231,0 chr2 119367477 . C G 1452.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.084;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.96;ReadPosRankSum=-0.792;SOR=0.620 GT:AD:DP:GQ:PL 0/1:52,39:91:99:1481,0,2066 chr2 119367482 . C T 1456.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.732;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.772;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.66;ReadPosRankSum=-0.454;SOR=0.610 GT:AD:DP:GQ:PL 0/1:53,40:93:99:1485,0,2102 chr2 119367787 . C A 1461.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.741;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.72;ReadPosRankSum=-1.368;SOR=0.725 GT:AD:DP:GQ:PL 0/1:44,49:93:99:1490,0,1482 chr2 119367808 . G A 1703.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.979;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.82;ReadPosRankSum=2.027;SOR=0.684 GT:AD:DP:GQ:PL 0/1:56,59:115:99:1732,0,1709 chr2 119368113 . A T 1623.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.084;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=5.518;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.89;ReadPosRankSum=0.139;SOR=1.196 GT:AD:DP:GQ:PL 0/1:68,58:126:99:1652,0,2018 chr2 119368334 . C A 1803.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.208;ClippingRankSum=0.000;DP=169;ExcessHet=3.0103;FS=5.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.67;ReadPosRankSum=0.755;SOR=0.900 GT:AD:DP:GQ:PL 0/1:91,78:169:99:1832,0,2493 chr2 119368360 . T C 1760.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.622;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=3.929;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.51;ReadPosRankSum=-1.502;SOR=1.067 GT:AD:DP:GQ:PL 0/1:83,70:153:99:1789,0,2292 chr2 119370906 . C T 754.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.189;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=1.326;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.40;ReadPosRankSum=-0.387;SOR=0.460 GT:AD:DP:GQ:PL 0/1:21,28:49:99:783,0,661 chr2 119429768 . A G 343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.031;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=2.872;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.74;ReadPosRankSum=0.258;SOR=1.651 GT:AD:DP:GQ:PL 0/1:20,12:32:99:372,0,659 chr2 119431828 . A G 189.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.11;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:218,21,0 chr2 119431857 . G C 448.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.05;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,14:14:42:477,42,0 chr2 119432144 . A G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.71;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 119436170 . G C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 119436241 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 119436661 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 119436663 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 119437606 . C G 1026.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.14;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1055,84,0 chr2 119440094 . G A 542.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.511;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.87;ReadPosRankSum=-0.896;SOR=0.804 GT:AD:DP:GQ:PL 0/1:33,22:55:99:571,0,907 chr2 119441351 . G A 446.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.302;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.87;ReadPosRankSum=-0.478;SOR=0.963 GT:AD:DP:GQ:PL 0/1:11,14:25:99:475,0,350 chr2 119441564 . A G 5158.77 PASS AC=2;AF=1.00;AN=2;DP=170;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.35;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,170:170:99:5187,509,0 chr2 119446476 . T C 267.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.75;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:296,27,0 chr2 119446547 . T C 350.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.964;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.10;ReadPosRankSum=-1.404;SOR=0.818 GT:AD:DP:GQ:PL 0/1:17,12:29:99:379,0,610 chr2 119447041 . G A 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr2 119448342 . C G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=1.383;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:66:71,0,66 chr2 119452113 . A G 12704.77 PASS AC=2;AF=1.00;AN=2;DP=381;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.35;SOR=1.197 GT:AD:DP:GQ:PL 1/1:0,381:381:99:12733,1144,0 chr2 119462114 . C T 669.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.673;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.61;ReadPosRankSum=1.382;SOR=0.844 GT:AD:DP:GQ:PL 0/1:11,20:31:99:698,0,333 chr2 119463905 . T A,C 518.77 PASS AC=1,1;AF=0.500,0.500;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=60.00;QD=34.58;SOR=4.047 GT:AD:DP:GQ:PL 1/2:0,5,10:15:99:547,388,373,160,0,130 chr2 119464009 . G A 1098.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.032;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=-2.184;SOR=0.579 GT:AD:DP:GQ:PL 0/1:40,36:76:99:1127,0,1340 chr2 119464285 . G A 2114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.086;ClippingRankSum=0.000;DP=143;ExcessHet=3.0103;FS=7.204;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.79;ReadPosRankSum=0.484;SOR=0.318 GT:AD:DP:GQ:PL 0/1:66,77:143:99:2143,0,1986 chr2 119464408 . A C 1329.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.75;SOR=4.680 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1358,96,0 chr2 119464416 . T C 448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.280;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.26;ReadPosRankSum=-0.386;SOR=0.255 GT:AD:DP:GQ:PL 0/1:12,14:26:99:477,0,420 chr2 119464961 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 119472394 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 119473325 . C T 1365.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.83;SOR=4.863 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1394,105,0 chr2 119473422 . G A 5352.77 PASS AC=2;AF=1.00;AN=2;DP=166;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.25;SOR=2.084 GT:AD:DP:GQ:PL 1/1:0,166:166:99:5381,496,0 chr2 119473589 . T C 9232.77 PASS AC=2;AF=1.00;AN=2;DP=281;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.86;SOR=1.123 GT:AD:DP:GQ:PL 1/1:0,281:281:99:9261,842,0 chr2 119473727 . T C 3309.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.77;SOR=2.030 GT:AD:DP:GQ:PL 1/1:0,98:98:99:3338,294,0 chr2 119473856 . A C 605.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.57;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:634,48,0 chr2 119473907 . C T 134.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.98;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:163,15,0 chr2 119478756 . A C 459.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.441;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.85;ReadPosRankSum=-1.700;SOR=0.627 GT:AD:DP:GQ:PL 0/1:15,14:29:99:488,0,505 chr2 119480787 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 119524439 . C T 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.79;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,2:6:69:69,0,115 chr2 119546244 . A T 459.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.023;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.37;ReadPosRankSum=1.782;SOR=1.112 GT:AD:DP:GQ:PL 0/1:16,16:32:99:488,0,486 chr2 119587297 . T A 680.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.391;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.329;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.60;ReadPosRankSum=1.952;SOR=0.498 GT:AD:DP:GQ:PL 0/1:17,24:41:99:709,0,483 chr2 119604831 . C T 7583.77 PASS AC=2;AF=1.00;AN=2;DP=246;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.95;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,245:245:99:7612,731,0 chr2 119605321 . T A 1802.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.67;SOR=2.393 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1831,156,0 chr2 119611529 . A G 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=0.431;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,148 chr2 119611724 . T C 2487.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.93;SOR=0.740 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2516,258,0 chr2 119615409 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 119627973 . A C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 119630061 . G C 549.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.57;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:578,42,0 chr2 119630064 . T C 100.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.16;ReadPosRankSum=-0.903;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:99:129,0,258 chr2 119630836 . G A 4148.77 PASS AC=2;AF=1.00;AN=2;DP=135;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.96;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4177,399,0 chr2 119638081 . A G 297.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.49;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:326,24,0 chr2 119638598 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 119640118 . A G 293.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.40;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:322,24,0 chr2 119651775 . C T 135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.849;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.05;ReadPosRankSum=0.443;SOR=0.260 GT:AD:DP:GQ:PL 0/1:10,5:15:99:164,0,360 chr2 119651854 . A G 2951.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.05;SOR=3.940 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2980,238,0 chr2 119652406 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 119656507 . C T 2365.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.86;SOR=2.115 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2394,216,0 chr2 119659718 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 119680939 . G C 4146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.195;ClippingRankSum=0.000;DP=340;ExcessHet=3.0103;FS=0.819;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.20;ReadPosRankSum=0.907;SOR=0.628 GT:AD:DP:GQ:PL 0/1:175,165:340:99:4175,0,6668 chr2 119680947 . A G 4384.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.307;ClippingRankSum=0.000;DP=333;ExcessHet=3.0103;FS=1.793;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.17;ReadPosRankSum=-0.635;SOR=0.798 GT:AD:DP:GQ:PL 0/1:160,173:333:99:4413,0,6119 chr2 119681120 . A G 10035.77 PASS AC=2;AF=1.00;AN=2;DP=298;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.68;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,298:298:99:10064,895,0 chr2 119681654 . C G 3460.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.055;ClippingRankSum=0.000;DP=302;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.46;ReadPosRankSum=-0.132;SOR=0.693 GT:AD:DP:GQ:PL 0/1:168,134:302:99:3489,0,4484 chr2 119681883 . C A 583.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.518;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=4.660;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.89;ReadPosRankSum=-0.323;SOR=1.497 GT:AD:DP:GQ:PL 0/1:39,20:59:99:612,0,1138 chr2 119685867 . A G 1044.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.046;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.12;ReadPosRankSum=-0.815;SOR=0.693 GT:AD:DP:GQ:PL 0/1:37,37:74:99:1073,0,999 chr2 119686089 . T C 157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.78;ReadPosRankSum=1.180;SOR=0.105 GT:AD:DP:GQ:PL 0/1:4,6:10:99:186,0,137 chr2 119703610 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 119723967 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 119724838 . C T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.35;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 119724840 . T C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.25;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 119734443 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 119760017 . C T 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=0.524;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,115 chr2 119820630 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 119837405 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.80;ReadPosRankSum=0.084;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:31:81,0,31 chr2 119873179 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 119932329 . A G 678.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.064;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.659;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.58;ReadPosRankSum=0.331;SOR=1.085 GT:AD:DP:GQ:PL 0/1:28,22:50:99:707,0,882 chr2 119935138 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 119946266 . A G 60.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.06;ReadPosRankSum=-0.224;SOR=0.148 GT:AD:DP:GQ:PL 0/1:9,3:12:89:89,0,332 chr2 119946590 . G T 1961.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.312;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=1.723;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.22;ReadPosRankSum=0.528;SOR=0.964 GT:AD:DP:GQ:PL 0/1:46,51:97:99:1990,0,2108 chr2 119960746 . A G 329.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.101;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.19;ReadPosRankSum=-1.075;SOR=0.610 GT:AD:DP:GQ:PL 0/1:13,12:25:99:358,0,400 chr2 119961096 . T G 396.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.25;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:425,33,0 chr2 119968128 . A G 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.75;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr2 120019412 . A G 1086.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.580;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.88;ReadPosRankSum=0.349;SOR=1.900 GT:AD:DP:GQ:PL 0/1:12,30:42:99:1115,0,374 chr2 120073239 . A G 735.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.66;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,24:24:72:764,72,0 chr2 120075283 . G A 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr2 120077915 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 120093434 . G T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 120103976 . T G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.253;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 120127734 . G A 4808.77 PASS AC=2;AF=1.00;AN=2;DP=146;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.94;SOR=1.350 GT:AD:DP:GQ:PL 1/1:0,146:146:99:4837,438,0 chr2 120131597 . G C 2764.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.794;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=1.485;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=22.85;ReadPosRankSum=0.705;SOR=0.441 GT:AD:DP:GQ:PL 1/1:8,113:121:99:2793,152,0 chr2 120142829 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 120161009 . A C 2241.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.49;SOR=1.576 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2270,207,0 chr2 120161150 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.96;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 120174601 . T G 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.13;ReadPosRankSum=-0.431;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:53:137,0,53 chr2 120215915 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 120218255 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 120221746 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 120222742 . C T 4775.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.127;ClippingRankSum=0.000;DP=370;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.91;ReadPosRankSum=0.236;SOR=0.681 GT:AD:DP:GQ:PL 0/1:199,171:370:99:4804,0,5614 chr2 120222852 . G C 10918.77 PASS AC=2;AF=1.00;AN=2;DP=327;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.60;SOR=0.872 GT:AD:DP:GQ:PL 1/1:0,325:325:99:10947,976,0 chr2 120240293 . A T 828.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.808;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=1.271;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.05;ReadPosRankSum=-0.398;SOR=1.022 GT:AD:DP:GQ:PL 0/1:20,39:59:99:857,0,296 chr2 120255090 . T A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 120256531 . G C 48.81 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.76;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:20:77,0,20 chr2 120256568 . A G 96.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:125,15,0 chr2 120260006 . T C 83.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=45.53;QD=27.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:111,9,0 chr2 120261668 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 120278809 . T G 10369.77 PASS AC=2;AF=1.00;AN=2;DP=232;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.25;SOR=1.579 GT:AD:DP:GQ:PL 1/1:0,232:232:99:10398,698,0 chr2 120278810 . T A 10369.77 PASS AC=2;AF=1.00;AN=2;DP=230;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.90;SOR=1.558 GT:AD:DP:GQ:PL 1/1:0,230:230:99:10398,698,0 chr2 120279001 . C T 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=-0.524;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr2 120281035 . C T 176.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.73;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:205,15,0 chr2 120285827 . G A 1645.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.91;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1674,126,0 chr2 120292984 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 120293013 . C T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 120293413 . T A 1099.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.55;SOR=1.547 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1128,108,0 chr2 120303715 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 120323684 . G T 86.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=0.253;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,4:6:31:115,0,31 chr2 120356858 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 120367258 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 120367262 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 120381905 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 120396047 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 120398560 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 120405973 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 120463630 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 120464919 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 120475144 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 120475152 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 120487964 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 120488027 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 120488037 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 120488038 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 120499766 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 120499946 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 120512036 . C G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 120515005 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 120526148 . A G 58.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:86,9,0 chr2 120600898 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 120609161 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 120614795 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 120623235 . C T 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr2 120634689 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 120634779 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 120654600 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 120654602 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 120686104 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 120689652 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 120691006 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 120691112 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 120710331 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 120717572 . C T 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr2 120736386 . T A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 120738026 . A G 59.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:87,9,0 chr2 120809536 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 120823391 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 120823528 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 120833021 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 120912822 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 120924935 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 120927087 . C G 552.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.71;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:54:581,54,0 chr2 120938123 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 120951008 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 120951087 . A G 569.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.50;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:598,45,0 chr2 120951515 . G A 812.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.11;SOR=4.712 GT:AD:DP:GQ:PL 1/1:0,21:21:63:841,63,0 chr2 120955446 . C G 2555.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.17;SOR=4.103 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2584,178,0 chr2 120955454 . G A 2256.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.10;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,48:48:99:2285,154,0 chr2 120955465 . T C 1632.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.44;SOR=4.664 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1661,129,0 chr2 120968871 . G A 6709.77 PASS AC=2;AF=1.00;AN=2;DP=220;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.64;SOR=1.216 GT:AD:DP:GQ:PL 1/1:0,219:219:99:6738,652,0 chr2 120970177 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 120970266 . G A 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.53;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr2 120970946 . T C 98.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:126,9,0 chr2 120971596 . C T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.32;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 120971600 . C G 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.80;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 120971747 . A G 3101.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.28;SOR=3.456 GT:AD:DP:GQ:PL 1/1:0,83:83:99:3130,250,0 chr2 120971784 . T C 4558.77 PASS AC=2;AF=1.00;AN=2;DP=127;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.77;SOR=2.815 GT:AD:DP:GQ:PL 1/1:0,127:127:99:4587,382,0 chr2 120971914 . C T 13644.77 PASS AC=2;AF=1.00;AN=2;DP=433;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.66;SOR=0.969 GT:AD:DP:GQ:PL 1/1:0,431:431:99:13673,1285,0 chr2 120972110 . T C 6056.77 PASS AC=2;AF=1.00;AN=2;DP=165;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.89;SOR=3.008 GT:AD:DP:GQ:PL 1/1:0,165:165:99:6085,496,0 chr2 120972274 . A G 362.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:33:391,33,0 chr2 120972355 . G C 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr2 120972394 . T C 563.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.78;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,15:15:45:592,45,0 chr2 120972562 . C G 8188.77 PASS AC=2;AF=1.00;AN=2;DP=234;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.99;SOR=2.559 GT:AD:DP:GQ:PL 1/1:0,234:234:99:8217,703,0 chr2 120972902 . G T 2170.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=8.015 GT:AD:DP:GQ:PL 1/1:0,54:54:99:2199,163,0 chr2 120982614 . C T 3685.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.80;SOR=3.967 GT:AD:DP:GQ:PL 1/1:0,80:80:99:3714,250,0 chr2 120982618 . T G 3721.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.74;SOR=4.073 GT:AD:DP:GQ:PL 1/1:0,84:84:99:3750,253,0 chr2 120982929 . C T 5076.77 PASS AC=2;AF=1.00;AN=2;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.93;SOR=2.775 GT:AD:DP:GQ:PL 1/1:0,159:159:99:5105,473,0 chr2 120984235 . C T 73.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.489;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.22;ReadPosRankSum=-0.703;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:102,0,153 chr2 120984267 . A G 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.56;ReadPosRankSum=0.493;SOR=0.269 GT:AD:DP:GQ:PL 0/1:8,4:12:99:131,0,286 chr2 120986649 . A G 2067.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.129;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=4.199;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.98;ReadPosRankSum=-1.632;SOR=0.412 GT:AD:DP:GQ:PL 0/1:62,76:138:99:2096,0,1735 chr2 120989380 . G T 3478.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.024;ClippingRankSum=0.000;DP=242;ExcessHet=3.0103;FS=3.566;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.38;ReadPosRankSum=-0.367;SOR=0.872 GT:AD:DP:GQ:PL 0/1:116,126:242:99:3507,0,3048 chr2 120989830 . G A 4579.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.005;ClippingRankSum=0.000;DP=365;ExcessHet=3.0103;FS=1.737;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.55;ReadPosRankSum=-1.973;SOR=0.797 GT:AD:DP:GQ:PL 0/1:193,172:365:99:4608,0,5498 chr2 120989853 . A G 3856.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.150;ClippingRankSum=0.000;DP=330;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.69;ReadPosRankSum=-2.109;SOR=0.717 GT:AD:DP:GQ:PL 0/1:184,146:330:99:3885,0,5221 chr2 121018552 . G T 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr2 121021781 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 121026074 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 121042650 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 121042685 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 121042705 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 121054398 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 121098709 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 121113553 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 121125627 . G A 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=-0.566;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,4:8:99:109,0,143 chr2 121134827 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 121151574 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 121151605 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 121156625 . G C 35.31 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.77;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:1:61,0,1 chr2 121156640 . G T 35.31 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.77;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:1:61,0,1 chr2 121156665 . T A 35.31 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.77;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:1:61,0,1 chr2 121195804 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 121205371 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 121210838 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 121224374 . A G 4899.77 PASS AC=2;AF=1.00;AN=2;DP=152;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.45;SOR=0.909 GT:AD:DP:GQ:PL 1/1:0,151:151:99:4928,453,0 chr2 121224700 . T C 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr2 121224721 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 121236703 . T A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.645;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=1.036;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,208 chr2 121237575 . T C 3244.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.971;ClippingRankSum=0.000;DP=208;ExcessHet=3.0103;FS=12.753;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=1.120;SOR=1.442 GT:AD:DP:GQ:PL 0/1:94,114:208:99:3273,0,2482 chr2 121239544 . G A 3536.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.687;ClippingRankSum=0.000;DP=292;ExcessHet=3.0103;FS=11.079;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.11;ReadPosRankSum=-0.881;SOR=1.033 GT:AD:DP:GQ:PL 0/1:157,135:292:99:3565,0,4223 chr2 121247020 . C G 4165.77 PASS AC=2;AF=1.00;AN=2;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.87;SOR=2.400 GT:AD:DP:GQ:PL 1/1:0,123:123:99:4194,369,0 chr2 121248352 . C T 1327.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.703;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=1.922;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.98;ReadPosRankSum=0.506;SOR=0.491 GT:AD:DP:GQ:PL 0/1:44,51:95:99:1356,0,1334 chr2 121249275 . A C 542.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.034;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.24;ReadPosRankSum=0.386;SOR=0.569 GT:AD:DP:GQ:PL 0/1:20,21:41:99:571,0,640 chr2 121281364 . G A 894.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.141;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=7.950;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.20;ReadPosRankSum=0.781;SOR=0.132 GT:AD:DP:GQ:PL 0/1:29,34:63:99:923,0,903 chr2 121430372 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 121462456 . T C 261.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.059;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.392;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.40;ReadPosRankSum=-0.834;SOR=1.552 GT:AD:DP:GQ:PL 0/1:8,9:17:99:290,0,215 chr2 121593212 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 121730725 . T C 377.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.530;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.42;ReadPosRankSum=-1.637;SOR=0.610 GT:AD:DP:GQ:PL 0/1:10,13:23:99:406,0,314 chr2 121825814 . A C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr2 121825848 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 121840971 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 121845777 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 121890168 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 121890717 . A G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.80;ReadPosRankSum=0.967;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:31:81,0,31 chr2 121930483 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 121997726 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 121997747 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 122003152 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 122025513 . G T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 122025904 . G A 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr2 122189009 . G A 61.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:89,9,0 chr2 122734844 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 122734893 . C G 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr2 123071040 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 123071051 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 123072731 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 123240396 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 123445583 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 123461536 . C T 277.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.72;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:306,24,0 chr2 123463325 . T C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 123522777 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 123566354 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 123682105 . A G 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=1.834;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,115 chr2 123723791 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 124097704 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 124110865 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 124110874 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 124434491 . T C 4040.77 PASS AC=2;AF=1.00;AN=2;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.57;SOR=1.224 GT:AD:DP:GQ:PL 1/1:0,128:128:99:4069,383,0 chr2 124475032 . G T 1848.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.88;SOR=2.001 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1877,174,0 chr2 124504719 . T C 294.14 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.660;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.01;ReadPosRankSum=-1.335;SOR=0.582 GT:AD:DP:GQ:PL 0/1:2,12:14:40:321,0,40 chr2 124544392 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 124627223 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 124632596 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 124632599 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 124647725 . C T 8241.77 PASS AC=2;AF=1.00;AN=2;DP=254;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.58;SOR=1.526 GT:AD:DP:GQ:PL 1/1:0,253:253:99:8270,760,0 chr2 124911683 . A G 146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=-1.776;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:175,0,218 chr2 124913967 . G A 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-0.819;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr2 125252882 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 125252903 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 125449073 . C T 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr2 125449112 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 125449287 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 125449594 . T G 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr2 125633162 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 125633163 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 125633173 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 125640301 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 125727150 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 125888092 . C G 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr2 125920787 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 125932477 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 126053135 . C A 46.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:74,9,0 chr2 126074322 . C G 61.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.143;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.271;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.63;ReadPosRankSum=-1.349;SOR=0.735 GT:AD:DP:GQ:PL 0/1:12,5:17:90:90,0,297 chr2 126074362 . C T 64.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.876;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=5.237;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.05;ReadPosRankSum=0.000;SOR=0.681 GT:AD:DP:GQ:PL 0/1:11,5:16:93:93,0,309 chr2 126372466 . T C 71.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.177;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.52;ReadPosRankSum=-0.369;SOR=1.270 GT:AD:DP:GQ:PL 0/1:7,4:11:99:100,0,142 chr2 126372562 . T A 205.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.765;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=2.158;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.86;ReadPosRankSum=-0.109;SOR=0.842 GT:AD:DP:GQ:PL 0/1:6,10:16:99:234,0,171 chr2 126372597 . T C 285.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.643;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.81;ReadPosRankSum=-0.527;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,12:17:99:314,0,138 chr2 126372671 . A T 457.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.608;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.31;ReadPosRankSum=-0.300;SOR=0.551 GT:AD:DP:GQ:PL 0/1:12,13:25:99:486,0,501 chr2 126372854 . A T 356.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.912;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.89;ReadPosRankSum=0.875;SOR=0.784 GT:AD:DP:GQ:PL 0/1:17,13:30:99:385,0,484 chr2 126372966 . A G 354.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.00;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:383,30,0 chr2 126573390 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:32:75,0,32 chr2 126648916 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 126678381 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 126678387 . A G 72.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:100,9,0 chr2 126690187 . G A 1729.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.743;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.63;ReadPosRankSum=3.056;SOR=0.677 GT:AD:DP:GQ:PL 0/1:43,61:104:99:1758,0,1199 chr2 126690214 . G A 1436.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.356;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=0.698;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.80;ReadPosRankSum=-0.208;SOR=0.808 GT:AD:DP:GQ:PL 0/1:79,54:133:99:1465,0,2165 chr2 126696088 . A C 2447.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.603;ClippingRankSum=0.000;DP=236;ExcessHet=3.0103;FS=1.597;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.37;ReadPosRankSum=0.509;SOR=0.582 GT:AD:DP:GQ:PL 0/1:137,99:236:99:2476,0,3610 chr2 126739846 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 126774878 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 126776033 . A G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 126782543 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 126858871 . T C 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=-0.674;SOR=0.991 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,107 chr2 126899645 . C T 1836.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.13;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1865,156,0 chr2 126934801 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 126971014 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 126974687 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 127006346 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.33;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 127006368 . G T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.84;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 127013430 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 127042842 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 127049443 . A G 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr2 127049451 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr2 127050650 . A T 2377.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.697;ClippingRankSum=0.000;DP=167;ExcessHet=3.0103;FS=1.269;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.24;ReadPosRankSum=-2.472;SOR=0.580 GT:AD:DP:GQ:PL 0/1:84,83:167:99:2406,0,2527 chr2 127050956 . G A 761.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.259;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.90;ReadPosRankSum=-0.957;SOR=0.623 GT:AD:DP:GQ:PL 0/1:34,30:64:99:790,0,1012 chr2 127051333 . G A 1466.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.596;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=0.798;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.82;ReadPosRankSum=0.740;SOR=0.589 GT:AD:DP:GQ:PL 0/1:44,55:99:99:1495,0,1342 chr2 127051587 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 127057200 . G A 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=-0.497;SOR=0.045 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,224 chr2 127057259 . T C 208.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.324;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.94;ReadPosRankSum=-1.135;SOR=0.542 GT:AD:DP:GQ:PL 0/1:13,8:21:99:237,0,411 chr2 127058848 . A G 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.58;ReadPosRankSum=0.732;SOR=0.662 GT:AD:DP:GQ:PL 0/1:5,5:10:99:134,0,145 chr2 127059056 . G A 1306.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.282;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.171;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.78;ReadPosRankSum=-0.304;SOR=0.974 GT:AD:DP:GQ:PL 0/1:18,42:60:99:1335,0,457 chr2 127063509 . C T 2028.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.599;ClippingRankSum=0.000;DP=145;ExcessHet=3.0103;FS=0.710;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=0.108;SOR=0.818 GT:AD:DP:GQ:PL 0/1:75,70:145:99:2057,0,2185 chr2 127063876 . C T 1469.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.764;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=2.161;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.65;ReadPosRankSum=0.214;SOR=0.515 GT:AD:DP:GQ:PL 0/1:74,64:138:99:1498,0,2229 chr2 127063923 . T C 1820.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.822;ClippingRankSum=0.000;DP=167;ExcessHet=3.0103;FS=0.569;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.90;ReadPosRankSum=1.024;SOR=0.636 GT:AD:DP:GQ:PL 0/1:92,75:167:99:1849,0,2649 chr2 127068957 . A G 2345.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.516;ClippingRankSum=0.000;DP=254;ExcessHet=3.0103;FS=7.382;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.24;ReadPosRankSum=-0.490;SOR=1.130 GT:AD:DP:GQ:PL 0/1:158,96:254:99:2374,0,4294 chr2 127076041 . C T 53.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.349;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=2.398;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.48;ReadPosRankSum=0.431;SOR=1.609 GT:AD:DP:GQ:PL 0/1:8,4:12:82:82,0,196 chr2 127076160 . T C 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.967;SOR=0.368 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr2 127076387 . C T 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.13;ReadPosRankSum=-0.253;SOR=1.414 GT:AD:DP:GQ:PL 0/1:2,4:6:48:137,0,48 chr2 127076560 . T C 2729.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.815;ClippingRankSum=0.000;DP=195;ExcessHet=3.0103;FS=0.570;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.00;ReadPosRankSum=0.416;SOR=0.769 GT:AD:DP:GQ:PL 0/1:95,100:195:99:2758,0,2393 chr2 127076793 . C T 2001.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.385;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=3.181;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.06;ReadPosRankSum=-0.744;SOR=1.149 GT:AD:DP:GQ:PL 0/1:51,54:105:99:2030,0,1945 chr2 127076808 . T C 1689.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.173;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=9.253;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.12;ReadPosRankSum=-0.631;SOR=1.855 GT:AD:DP:GQ:PL 0/1:43,41:84:99:1718,0,1748 chr2 127076883 . T C 439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.517;SOR=0.770 GT:AD:DP:GQ:PL 0/1:12,13:25:99:468,0,436 chr2 127076952 . C T 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-0.084;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr2 127078003 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 127078048 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 127078059 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 127078090 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 127078251 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 127081898 . G A 3278.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.81;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3307,329,0 chr2 127081937 . G A 1146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.053;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.898;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.89;ReadPosRankSum=-1.250;SOR=0.823 GT:AD:DP:GQ:PL 0/1:34,43:77:99:1175,0,883 chr2 127081958 . T C 640.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.118;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=2.631;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.24;ReadPosRankSum=2.056;SOR=0.321 GT:AD:DP:GQ:PL 0/1:32,25:57:99:669,0,971 chr2 127085175 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 127085617 . C A 85.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.751;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.53;ReadPosRankSum=0.508;SOR=0.707 GT:AD:DP:GQ:PL 0/1:4,5:9:99:114,0,106 chr2 127085666 . C A 85.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.751;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.53;ReadPosRankSum=-1.085;SOR=1.022 GT:AD:DP:GQ:PL 0/1:4,5:9:99:114,0,106 chr2 127086080 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 127086199 . T A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 127094628 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 127102573 . C A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.674;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr2 127106624 . C A 74.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.48;ReadPosRankSum=-0.210;SOR=0.892 GT:AD:DP:GQ:PL 0/1:6,4:10:99:103,0,186 chr2 127106970 . G A 493.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.118;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=1.377;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.52;ReadPosRankSum=-0.496;SOR=1.127 GT:AD:DP:GQ:PL 0/1:15,19:34:99:522,0,390 chr2 127160173 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 127161908 . C G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 127162044 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 127170155 . G A 127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.29;ReadPosRankSum=0.385;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:156,0,196 chr2 127170156 . G A 127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.25;ReadPosRankSum=-0.328;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:156,0,196 chr2 127170360 . T A 1134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.859;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.13;ReadPosRankSum=0.626;SOR=0.693 GT:AD:DP:GQ:PL 0/1:52,50:102:99:1163,0,1323 chr2 127170414 . G A 955.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.006;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=0.903;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.58;ReadPosRankSum=-0.033;SOR=0.929 GT:AD:DP:GQ:PL 0/1:38,38:76:99:984,0,984 chr2 127170610 . T C 157.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.30;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:186,0,24 chr2 127192867 . G A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr2 127193328 . A T 772.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.197;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=4.613;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.89;ReadPosRankSum=0.015;SOR=0.255 GT:AD:DP:GQ:PL 0/1:36,29:65:99:801,0,1187 chr2 127193882 . G A 2438.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.337;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=8.611;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.04;ReadPosRankSum=0.441;SOR=0.314 GT:AD:DP:GQ:PL 0/1:87,65:152:99:2467,0,4314 chr2 127193883 . C T 2438.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.370;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=8.741;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.15;ReadPosRankSum=0.481;SOR=0.298 GT:AD:DP:GQ:PL 0/1:86,65:151:99:2467,0,4314 chr2 127194221 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 127199236 . G A 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.524;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr2 127199852 . C A 179.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.48;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:208,15,0 chr2 127200941 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 127204917 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 127233594 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 127236616 . T C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 127249415 . C T 431.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.260;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=21.093;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.89;ReadPosRankSum=0.619;SOR=1.228 GT:AD:DP:GQ:PL 0/1:14,15:29:99:460,0,399 chr2 127249498 . A T 549.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.957;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=1.213;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.79;ReadPosRankSum=0.591;SOR=0.416 GT:AD:DP:GQ:PL 0/1:18,25:43:99:578,0,487 chr2 127250110 . A C 660.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.78;SOR=2.948 GT:AD:DP:GQ:PL 1/1:0,19:19:57:689,57,0 chr2 127257791 . C T 1779.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.36;SOR=2.179 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1808,165,0 chr2 127268549 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 127271216 . T C 3532.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.12;SOR=1.697 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3561,330,0 chr2 127288972 . C A 347.78 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.84;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 127292424 . A G 1128.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.14;SOR=2.694 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1157,93,0 chr2 127292558 . T C 5093.77 PASS AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.96;SOR=1.790 GT:AD:DP:GQ:PL 1/1:0,150:150:99:5122,450,0 chr2 127308431 . A G 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-0.697;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr2 127318446 . T C 218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=0.517;SOR=0.582 GT:AD:DP:GQ:PL 0/1:8,7:15:99:247,0,289 chr2 127324106 . C A 312.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.550;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.48;ReadPosRankSum=-1.691;SOR=0.732 GT:AD:DP:GQ:PL 0/1:20,13:33:99:341,0,668 chr2 127387717 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 127390278 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 127396708 . C G 272.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.185;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=1.952;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=-0.601;SOR=0.307 GT:AD:DP:GQ:PL 0/1:6,12:18:99:301,0,159 chr2 127407902 . T C 92.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:120,9,0 chr2 127408065 . C A 140.85 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.48;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:17:169,17,0 chr2 127418286 . C T 4066.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.417;ClippingRankSum=0.000;DP=297;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.74;ReadPosRankSum=-0.613;SOR=0.667 GT:AD:DP:GQ:PL 0/1:143,153:296:99:4095,0,3800 chr2 127418299 . G A 10542.77 PASS AC=2;AF=1.00;AN=2;DP=329;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.24;SOR=1.646 GT:AD:DP:GQ:PL 1/1:0,327:327:99:10571,979,0 chr2 127418619 . G A 3318.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.21;SOR=5.186 GT:AD:DP:GQ:PL 1/1:0,84:84:99:3347,253,0 chr2 127419801 . C T 2619.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.93;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2648,225,0 chr2 127420398 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 127421750 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 127423296 . G T 808.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.849;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=2.035;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.72;ReadPosRankSum=0.454;SOR=1.078 GT:AD:DP:GQ:PL 0/1:38,31:69:99:837,0,1141 chr2 127423452 . A G 3450.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3479,300,0 chr2 127425871 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.67;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 127426338 . G T 556.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.211;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=4.378;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.40;ReadPosRankSum=0.325;SOR=2.033 GT:AD:DP:GQ:PL 0/1:14,18:32:99:585,0,450 chr2 127443967 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 127473818 . C T 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr2 127489408 . A G 216.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.45;ReadPosRankSum=0.736;SOR=0.582 GT:AD:DP:GQ:PL 0/1:8,7:15:99:245,0,289 chr2 127490064 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.57;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 127491865 . C T 928.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.98;SOR=6.358 GT:AD:DP:GQ:PL 1/1:0,23:23:69:957,69,0 chr2 127494658 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 127505900 . C T 667.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.00;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:51:696,51,0 chr2 127514382 . C T 5754.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.108;ClippingRankSum=0.000;DP=428;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.45;ReadPosRankSum=0.591;SOR=0.705 GT:AD:DP:GQ:PL 0/1:199,229:428:99:5783,0,4876 chr2 127523893 . C T 312.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.580;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.03;ReadPosRankSum=-1.571;SOR=1.244 GT:AD:DP:GQ:PL 0/1:14,10:24:99:341,0,466 chr2 127526967 . T C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.524;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 127537709 . G A 245.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.31;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:27:274,27,0 chr2 127537743 . A C 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.287;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.98;ReadPosRankSum=0.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,8:10:54:208,0,54 chr2 127537860 . A G 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr2 127552446 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 127552463 . C A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 127564195 . G A 4281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.480;ClippingRankSum=0.000;DP=309;ExcessHet=3.0103;FS=2.458;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.86;ReadPosRankSum=-0.230;SOR=0.855 GT:AD:DP:GQ:PL 0/1:142,167:309:99:4310,0,3588 chr2 127576838 . C T 92.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.765;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.31;ReadPosRankSum=-0.262;SOR=1.609 GT:AD:DP:GQ:PL 0/1:5,4:9:99:121,0,175 chr2 127577806 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 127580944 . T G 1266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.095;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.95;ReadPosRankSum=0.702;SOR=0.593 GT:AD:DP:GQ:PL 0/1:64,42:106:99:1295,0,2028 chr2 127581139 . A G 122.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.35;ReadPosRankSum=0.000;SOR=1.329 GT:AD:DP:GQ:PL 0/1:3,5:8:67:151,0,67 chr2 127581166 . T C 125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.97;ReadPosRankSum=-1.068;SOR=0.527 GT:AD:DP:GQ:PL 0/1:2,5:7:31:154,0,31 chr2 127581636 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 127581881 . G T 3211.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.178;ClippingRankSum=0.000;DP=234;ExcessHet=3.0103;FS=2.472;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.78;ReadPosRankSum=-0.094;SOR=0.910 GT:AD:DP:GQ:PL 0/1:120,113:233:99:3240,0,3366 chr2 127582183 . C G 1452.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.503;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=7.188;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.29;ReadPosRankSum=-1.682;SOR=1.711 GT:AD:DP:GQ:PL 0/1:40,44:84:99:1481,0,1350 chr2 127582678 . T C 438.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.16;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,12:12:36:467,36,0 chr2 127582702 . T C 224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.282;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.97;ReadPosRankSum=2.200;SOR=0.859 GT:AD:DP:GQ:PL 0/1:2,7:9:56:253,0,56 chr2 127584028 . T G 644.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.12;ReadPosRankSum=0.977;SOR=0.602 GT:AD:DP:GQ:PL 0/1:21,19:40:99:673,0,744 chr2 127584972 . G A 4761.77 PASS AC=2;AF=1.00;AN=2;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.30;SOR=2.066 GT:AD:DP:GQ:PL 1/1:0,143:143:99:4790,429,0 chr2 127585160 . T C 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 127588385 . T C 2363.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.943;ClippingRankSum=0.000;DP=186;ExcessHet=3.0103;FS=3.542;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.71;ReadPosRankSum=1.524;SOR=0.974 GT:AD:DP:GQ:PL 0/1:101,85:186:99:2392,0,2852 chr2 127588653 . A C 3344.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.85;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,83:83:99:3373,250,0 chr2 127592976 . G A 4525.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.320;ClippingRankSum=0.000;DP=311;ExcessHet=3.0103;FS=1.023;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.60;ReadPosRankSum=0.491;SOR=0.621 GT:AD:DP:GQ:PL 0/1:149,161:310:99:4554,0,4207 chr2 127593169 . C A 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=-0.210;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,106 chr2 127593233 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr2 127593390 . C T 385.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.969;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.29;ReadPosRankSum=0.603;SOR=0.132 GT:AD:DP:GQ:PL 0/1:15,12:27:99:414,0,528 chr2 127593771 . T C 1219.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.316;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=3.041;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.94;ReadPosRankSum=-0.261;SOR=0.132 GT:AD:DP:GQ:PL 0/1:31,37:68:99:1248,0,1085 chr2 127596449 . T C 3293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.921;ClippingRankSum=0.000;DP=234;ExcessHet=3.0103;FS=3.692;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.08;ReadPosRankSum=0.264;SOR=0.484 GT:AD:DP:GQ:PL 0/1:100,134:234:99:3322,0,2406 chr2 127606033 . G A 519.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.183;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=6.340;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.77;ReadPosRankSum=-0.417;SOR=0.061 GT:AD:DP:GQ:PL 0/1:14,17:31:99:548,0,474 chr2 127607109 . G A 281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.373;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.81;ReadPosRankSum=-0.928;SOR=1.058 GT:AD:DP:GQ:PL 0/1:11,11:22:99:310,0,258 chr2 127609061 . G C 303.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.135;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.87;ReadPosRankSum=0.506;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,10:17:99:332,0,241 chr2 127609517 . G A 6324.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.498;ClippingRankSum=0.000;DP=451;ExcessHet=3.0103;FS=1.101;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.02;ReadPosRankSum=1.962;SOR=0.599 GT:AD:DP:GQ:PL 0/1:225,226:451:99:6353,0,5950 chr2 127612177 . A G 1532.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.509;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.56;ReadPosRankSum=-0.331;SOR=0.627 GT:AD:DP:GQ:PL 0/1:64,58:122:99:1561,0,1810 chr2 127612321 . A G 4144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.454;ClippingRankSum=0.000;DP=245;ExcessHet=3.0103;FS=0.988;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.92;ReadPosRankSum=-0.217;SOR=0.624 GT:AD:DP:GQ:PL 0/1:131,114:245:99:4173,0,7068 chr2 127612342 . C T 4513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.258;ClippingRankSum=0.000;DP=262;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.23;ReadPosRankSum=0.159;SOR=0.699 GT:AD:DP:GQ:PL 0/1:139,123:262:99:4542,0,7214 chr2 127612625 . G A 758.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.627;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.18;ReadPosRankSum=0.099;SOR=1.077 GT:AD:DP:GQ:PL 0/1:25,25:50:99:787,0,826 chr2 127620258 . C G 1286.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.966;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=4.065;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.00;ReadPosRankSum=-0.451;SOR=1.135 GT:AD:DP:GQ:PL 0/1:54,45:99:99:1315,0,1398 chr2 127620561 . A C 157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.010;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.78;ReadPosRankSum=0.842;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,6:10:99:186,0,103 chr2 127624019 . C T 262.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.77;ReadPosRankSum=0.773;SOR=0.976 GT:AD:DP:GQ:PL 0/1:6,8:14:99:291,0,208 chr2 127625267 . T C 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.31;ReadPosRankSum=0.463;SOR=0.067 GT:AD:DP:GQ:PL 0/1:18,4:22:99:101,0,678 chr2 127625284 . C T 137.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.815;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.92;ReadPosRankSum=-0.845;SOR=0.340 GT:AD:DP:GQ:PL 0/1:22,6:28:99:166,0,801 chr2 127627649 . C G 3018.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.249;ClippingRankSum=0.000;DP=272;ExcessHet=3.0103;FS=0.450;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.10;ReadPosRankSum=0.581;SOR=0.753 GT:AD:DP:GQ:PL 0/1:162,110:272:99:3047,0,4622 chr2 127631215 . G A 3397.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.016;ClippingRankSum=0.000;DP=273;ExcessHet=3.0103;FS=3.292;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.45;ReadPosRankSum=0.136;SOR=0.641 GT:AD:DP:GQ:PL 0/1:139,134:273:99:3426,0,3663 chr2 127631287 . G C 3195.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.134;ClippingRankSum=0.000;DP=247;ExcessHet=3.0103;FS=0.470;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.94;ReadPosRankSum=0.959;SOR=0.752 GT:AD:DP:GQ:PL 0/1:125,122:247:99:3224,0,3391 chr2 127631768 . C T 1953.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.027;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=0.663;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.26;ReadPosRankSum=0.398;SOR=0.617 GT:AD:DP:GQ:PL 0/1:66,71:137:99:1982,0,1831 chr2 127631847 . G C 863.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.015;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.63;ReadPosRankSum=-1.256;SOR=0.702 GT:AD:DP:GQ:PL 0/1:22,27:49:99:892,0,703 chr2 127632049 . G A 68.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.64;ReadPosRankSum=0.480;SOR=1.022 GT:AD:DP:GQ:PL 0/1:6,3:9:97:97,0,223 chr2 127632075 . C T 133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.142;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.92;ReadPosRankSum=-0.207;SOR=1.609 GT:AD:DP:GQ:PL 0/1:10,5:15:99:162,0,338 chr2 127633114 . A G 254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.115;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=-0.111;SOR=1.609 GT:AD:DP:GQ:PL 0/1:9,8:17:99:283,0,291 chr2 127634893 . A G 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.887;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-1.345;SOR=0.799 GT:AD:DP:GQ:PL 0/1:3,5:8:89:185,0,89 chr2 127634972 . A C 398.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.454;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.62;ReadPosRankSum=1.568;SOR=0.257 GT:AD:DP:GQ:PL 0/1:11,13:24:99:427,0,376 chr2 127635686 . T C 1415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.671;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.803;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.16;ReadPosRankSum=1.929;SOR=0.579 GT:AD:DP:GQ:PL 0/1:46,54:100:99:1444,0,1145 chr2 127635714 . T C 1797.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.677;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=7.239;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.27;ReadPosRankSum=-1.488;SOR=0.295 GT:AD:DP:GQ:PL 0/1:57,69:126:99:1826,0,1468 chr2 127636225 . T C 3912.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.063;ClippingRankSum=0.000;DP=300;ExcessHet=3.0103;FS=4.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.04;ReadPosRankSum=0.503;SOR=0.491 GT:AD:DP:GQ:PL 0/1:154,146:300:99:3941,0,4030 chr2 127637183 . T C 3391.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.045;ClippingRankSum=0.000;DP=264;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=0.493;SOR=0.682 GT:AD:DP:GQ:PL 0/1:142,122:264:99:3420,0,4101 chr2 127637302 . C T 7719.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.255;ClippingRankSum=0.000;DP=446;ExcessHet=3.0103;FS=3.254;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.31;ReadPosRankSum=-0.010;SOR=0.939 GT:AD:DP:GQ:PL 0/1:241,205:446:99:7748,0,10865 chr2 127637380 . A G 5596.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.598;ClippingRankSum=0.000;DP=499;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.22;ReadPosRankSum=0.132;SOR=0.715 GT:AD:DP:GQ:PL 0/1:279,220:499:99:5625,0,7359 chr2 127639232 . A G 831.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.344;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.29;ReadPosRankSum=1.739;SOR=0.976 GT:AD:DP:GQ:PL 0/1:15,26:41:99:860,0,435 chr2 127639843 . T C 424.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.479;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.730;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.23;ReadPosRankSum=-2.027;SOR=0.257 GT:AD:DP:GQ:PL 0/1:7,14:21:99:453,0,229 chr2 127641265 . T C 94.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.80;ReadPosRankSum=-0.210;SOR=0.707 GT:AD:DP:GQ:PL 0/1:1,5:6:24:123,0,24 chr2 127642349 . T C 420.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.743;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.04;ReadPosRankSum=0.521;SOR=1.493 GT:AD:DP:GQ:PL 0/1:7,13:20:99:449,0,198 chr2 127643033 . C T 1046.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.584;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=9.923;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.77;ReadPosRankSum=-0.305;SOR=1.712 GT:AD:DP:GQ:PL 0/1:37,39:76:99:1075,0,976 chr2 127643208 . G A 460.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.134;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=1.824;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.03;ReadPosRankSum=0.358;SOR=1.473 GT:AD:DP:GQ:PL 0/1:8,15:23:99:489,0,197 chr2 127643516 . A G 2203.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.479;ClippingRankSum=0.000;DP=208;ExcessHet=3.0103;FS=3.138;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.60;ReadPosRankSum=0.110;SOR=0.929 GT:AD:DP:GQ:PL 0/1:116,92:208:99:2232,0,3038 chr2 127643725 . C T 365.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.42;ReadPosRankSum=0.484;SOR=0.446 GT:AD:DP:GQ:PL 0/1:10,11:21:99:394,0,349 chr2 127644337 . G A 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.258;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.91;ReadPosRankSum=-0.478;SOR=0.693 GT:AD:DP:GQ:PL 0/1:7,7:14:99:167,0,183 chr2 127645955 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 127647778 . G A 61.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.598;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.29;ReadPosRankSum=-0.598;SOR=2.093 GT:AD:DP:GQ:PL 0/1:3,3:6:73:90,0,73 chr2 127649316 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 127649372 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 127649924 . G A 1045.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.080;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.900;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=0.150;SOR=0.538 GT:AD:DP:GQ:PL 0/1:37,41:78:99:1074,0,1039 chr2 127650196 . C T 335.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.65;ReadPosRankSum=0.056;SOR=0.269 GT:AD:DP:GQ:PL 0/1:8,10:18:99:364,0,280 chr2 127654360 . A G 5002.77 PASS AC=2;AF=1.00;AN=2;DP=137;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.08;SOR=3.160 GT:AD:DP:GQ:PL 1/1:0,136:136:99:5031,409,0 chr2 127654376 . A G 5650.77 PASS AC=2;AF=1.00;AN=2;DP=164;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.46;SOR=2.391 GT:AD:DP:GQ:PL 1/1:0,164:164:99:5679,493,0 chr2 127663487 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 127664255 . G A 94.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.80;ReadPosRankSum=0.674;SOR=0.368 GT:AD:DP:GQ:PL 0/1:1,5:6:24:123,0,24 chr2 127709211 . G A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=-1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:73:107,0,73 chr2 127768811 . A C 441.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.110;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.565;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.77;ReadPosRankSum=-0.214;SOR=0.368 GT:AD:DP:GQ:PL 0/1:24,17:41:99:470,0,712 chr2 127770934 . C T 893.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.973;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.938;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.97;ReadPosRankSum=-0.137;SOR=0.563 GT:AD:DP:GQ:PL 0/1:30,34:64:99:922,0,722 chr2 127840887 . C T 428.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.229;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.603;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.15;ReadPosRankSum=0.869;SOR=0.412 GT:AD:DP:GQ:PL 0/1:9,16:25:99:457,0,233 chr2 127850716 . T C 129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.63;ReadPosRankSum=0.000;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:99:158,0,119 chr2 127853145 . T C 1644.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.300;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=4.549;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.30;ReadPosRankSum=-0.128;SOR=1.019 GT:AD:DP:GQ:PL 0/1:60,55:115:99:1673,0,1849 chr2 127857756 . C G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.385;SOR=2.093 GT:AD:DP:GQ:PL 0/1:3,3:6:73:107,0,73 chr2 127857816 . G T 218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.111;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=1.068;SOR=1.609 GT:AD:DP:GQ:PL 0/1:8,7:15:99:247,0,253 chr2 127858427 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 127864917 . G A 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.473;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=0.875;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,227 chr2 127870651 . T C 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=-0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr2 127919703 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 127942259 . C T 1434.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.759;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.07;ReadPosRankSum=-1.328;SOR=0.569 GT:AD:DP:GQ:PL 0/1:25,40:65:99:1463,0,849 chr2 127950489 . T C 3751.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.11;SOR=1.567 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3780,330,0 chr2 127976631 . G A 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=1.282;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr2 127987006 . A G 2118.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.63;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2147,188,0 chr2 127990025 . C A 246.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.33;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:275,21,0 chr2 127996280 . T C 7446.77 PASS AC=2;AF=1.00;AN=2;DP=235;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.82;SOR=1.599 GT:AD:DP:GQ:PL 1/1:0,234:234:99:7475,700,0 chr2 128000230 . C T 3599.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.96;SOR=0.853 GT:AD:DP:GQ:PL 1/1:0,106:106:99:3628,317,0 chr2 128014797 . C T 2685.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.397;ClippingRankSum=0.000;DP=201;ExcessHet=3.0103;FS=0.541;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.36;ReadPosRankSum=1.067;SOR=0.739 GT:AD:DP:GQ:PL 0/1:99,102:201:99:2714,0,2564 chr2 128058619 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 128058688 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 128067463 . C G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 128071254 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 128071264 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 128072999 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 128083296 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 128083307 . T C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 128083356 . C G 147.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.70;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:175,12,0 chr2 128083365 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.16;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 128084437 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 128091540 . T C 3455.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.91;SOR=1.115 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3484,315,0 chr2 128095532 . C T 248.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.62;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:32:277,32,0 chr2 128097693 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 128100038 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 128102893 . A G 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.765;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.86;ReadPosRankSum=0.000;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:108,0,182 chr2 128104237 . C T 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr2 128108284 . A G 286.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.13;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:315,21,0 chr2 128113234 . T C 1380.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.68;SOR=1.714 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1409,135,0 chr2 128113378 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 128114854 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 128115021 . C T 498.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.159;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=1.320;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.84;ReadPosRankSum=0.759;SOR=0.412 GT:AD:DP:GQ:PL 0/1:26,20:46:99:527,0,797 chr2 128115454 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 128116487 . G A 1387.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.23;SOR=5.728 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1416,105,0 chr2 128120263 . G C 700.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.37;SOR=2.636 GT:AD:DP:GQ:PL 1/1:0,21:21:63:729,63,0 chr2 128120440 . G A 3283.77 PASS AC=2;AF=1.00;AN=2;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.13;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,109:109:99:3312,327,0 chr2 128121093 . T C 1189.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.08;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1218,90,0 chr2 128121448 . G C 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.39;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 128123021 . A G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.674;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 128123325 . T A 1414.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=2.247 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1443,122,0 chr2 128123419 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.68;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 128125098 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 128132939 . T G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 128139881 . A G 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.524;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,72 chr2 128156183 . G A 666.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.34;SOR=2.531 GT:AD:DP:GQ:PL 1/1:0,20:20:60:695,60,0 chr2 128160964 . C T 394.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.57;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:33:423,33,0 chr2 128174537 . T G 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=0.712;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr2 128176826 . T C 2861.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.07;SOR=1.013 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2890,252,0 chr2 128178426 . T C 498.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.343;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=1.005;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.45;ReadPosRankSum=0.160;SOR=0.551 GT:AD:DP:GQ:PL 0/1:37,22:59:99:527,0,963 chr2 128182024 . G A 1064.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.249;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=5.758;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.38;ReadPosRankSum=1.107;SOR=0.244 GT:AD:DP:GQ:PL 0/1:26,39:65:99:1093,0,788 chr2 128182121 . A G 2181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.200;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=2.162;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.64;ReadPosRankSum=0.484;SOR=0.508 GT:AD:DP:GQ:PL 0/1:81,79:160:99:2210,0,2307 chr2 128182243 . G A 2874.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.323;ClippingRankSum=0.000;DP=266;ExcessHet=3.0103;FS=0.446;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.81;ReadPosRankSum=0.932;SOR=0.662 GT:AD:DP:GQ:PL 0/1:146,120:266:99:2903,0,3718 chr2 128183499 . G A 347.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.591;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.74;ReadPosRankSum=0.847;SOR=1.609 GT:AD:DP:GQ:PL 0/1:5,11:16:99:376,0,149 chr2 128186850 . T C 3507.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.06;SOR=1.902 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3536,308,0 chr2 128187002 . C A 221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.84;ReadPosRankSum=-1.142;SOR=0.693 GT:AD:DP:GQ:PL 0/1:7,7:14:99:250,0,250 chr2 128189931 . G A 629.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.576;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=1.118;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=-0.890;SOR=0.886 GT:AD:DP:GQ:PL 0/1:34,24:58:99:658,0,974 chr2 128199483 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 128203434 . C T 324.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.461;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.30;ReadPosRankSum=-0.298;SOR=1.765 GT:AD:DP:GQ:PL 0/1:5,11:16:99:353,0,127 chr2 128203733 . T G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 128268883 . G A 4275.77 PASS AC=2;AF=1.00;AN=2;DP=132;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.39;SOR=1.162 GT:AD:DP:GQ:PL 1/1:0,132:132:99:4304,395,0 chr2 128273689 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 128273922 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 128283510 . G A 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.000;SOR=2.245 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr2 128291365 . C T 94.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.80;ReadPosRankSum=-0.210;SOR=0.707 GT:AD:DP:GQ:PL 0/1:1,5:6:24:123,0,24 chr2 128299718 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 128299842 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 128299850 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 128309843 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 128310252 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 128318387 . T C 7617.77 PASS AC=2;AF=1.00;AN=2;DP=248;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.44;QD=30.72;SOR=0.904 GT:AD:DP:GQ:PL 1/1:0,248:248:99:7646,744,0 chr2 128322738 . C G 50.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.70;ReadPosRankSum=1.150;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:25:79,0,25 chr2 128347256 . G A 47.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:75,6,0 chr2 128347457 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 128386824 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 128403741 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 128403748 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 128403753 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 128405381 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 128405431 . C T 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr2 128443837 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 128443838 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 128457865 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 128457866 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 128465228 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 128465232 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 128467774 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 128467817 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 128471044 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 128478010 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 128519210 . C T 619.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.395;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.84;ReadPosRankSum=1.004;SOR=0.659 GT:AD:DP:GQ:PL 0/1:39,24:63:99:648,0,978 chr2 128643809 . T A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:67:81,0,67 chr2 128644704 . C G 98.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.11;ReadPosRankSum=-0.366;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:29:127,0,29 chr2 128654206 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 128665444 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 128714582 . A C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 128714620 . T C 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr2 128714641 . T C 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr2 128752684 . G T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr2 128752688 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr2 128853143 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 128868394 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.67;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 128882854 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 128981156 . T C 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr2 128995922 . C T 133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.29;ReadPosRankSum=0.842;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,4:6:81:162,0,81 chr2 128995931 . A C 155.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.25;ReadPosRankSum=0.241;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:78:184,0,78 chr2 129015705 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 129029334 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 129068645 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 129128751 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 129135057 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 129144393 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 129144469 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 129162476 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 129162598 . G A 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr2 129162685 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 129318411 . G A 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr2 129319481 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 129362332 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 129442794 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 129460126 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 129460194 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 129496404 . T G 2590.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.79;SOR=1.068 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2619,237,0 chr2 129496719 . A G 786.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.26;SOR=1.697 GT:AD:DP:GQ:PL 1/1:0,26:26:78:815,78,0 chr2 129545476 . G A 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 129646193 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 129647100 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 129647112 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 129710793 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 129722233 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 129741786 . G T 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr2 129741896 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 129765321 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 129890758 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 129891758 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 129902816 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 129903031 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 129904843 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 129923834 . G C 2634.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=3.489 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2663,213,0 chr2 129923874 . G A 1616.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.08;SOR=5.186 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1645,123,0 chr2 129923984 . T C 133.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:161,12,0 chr2 129925771 . G A 3003.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.97;SOR=1.274 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3032,290,0 chr2 129925959 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.66;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 129928812 . A T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 129962165 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.02;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 129963750 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 129979968 . C T 719.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.08;QD=31.52;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:748,54,0 chr2 129980005 . G A 925.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.559;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=2.465;MLEAC=1;MLEAF=0.500;MQ=48.11;MQRankSum=1.643;QD=25.02;ReadPosRankSum=0.000;SOR=0.346 GT:AD:DP:GQ:PL 0/1:6,31:37:99:954,0,120 chr2 129980590 . G A 7024.77 PASS AC=2;AF=1.00;AN=2;DP=236;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.22;QD=29.89;SOR=0.847 GT:AD:DP:GQ:PL 1/1:0,235:235:99:7053,704,0 chr2 129993548 . A T 1292.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.15;SOR=0.850 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1321,117,0 chr2 129993568 . C A 1207.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.64;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1236,111,0 chr2 129993830 . G C 67.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.378;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=49.89;MQRankSum=-3.657;QD=2.71;ReadPosRankSum=1.405;SOR=0.432 GT:AD:DP:GQ:PL 0/1:20,5:25:96:96,0,658 chr2 129993899 . G A 106.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.349;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.73;MQRankSum=-3.224;QD=8.90;ReadPosRankSum=-1.150;SOR=0.412 GT:AD:DP:GQ:PL 0/1:7,5:12:99:135,0,222 chr2 130007392 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 130037072 . A G 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.39;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr2 130037239 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 130037314 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.16;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 130040357 . G A 767.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.41;QD=28.45;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,21:21:63:796,63,0 chr2 130074958 . A G 2723.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.16;QD=29.93;SOR=1.071 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2752,271,0 chr2 130074972 . C T 1479.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.953;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.783;MLEAC=1;MLEAF=0.500;MQ=52.94;MQRankSum=-0.334;QD=15.10;ReadPosRankSum=0.544;SOR=0.865 GT:AD:DP:GQ:PL 0/1:38,60:98:99:1508,0,910 chr2 130095050 . T C 49.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.00;QD=30.92;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:77,6,0 chr2 130121066 . G T 47.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.34;QD=15.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:75,9,0 chr2 130121115 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.78;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 130135503 . A G 96.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.13;ReadPosRankSum=-0.431;SOR=0.368 GT:AD:DP:GQ:PL 0/1:1,5:6:24:125,0,24 chr2 130136315 . T C 77.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.751;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.56;MQRankSum=-1.383;QD=8.64;ReadPosRankSum=0.589;SOR=1.179 GT:AD:DP:GQ:PL 0/1:5,4:9:99:106,0,165 chr2 130136424 . A G 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.198;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.86;MQRankSum=-0.921;QD=9.91;ReadPosRankSum=1.314;SOR=0.458 GT:AD:DP:GQ:PL 0/1:9,5:14:99:167,0,232 chr2 130137741 . A G 537.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.41;QD=33.61;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,16:16:48:566,48,0 chr2 130137925 . G A 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.959;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.336;MLEAC=1;MLEAF=0.500;MQ=51.34;MQRankSum=-3.562;QD=6.05;ReadPosRankSum=-0.473;SOR=0.223 GT:AD:DP:GQ:PL 0/1:11,6:17:99:131,0,328 chr2 130139482 . G A 6426.77 PASS AC=2;AF=1.00;AN=2;DP=192;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.22;QD=33.47;SOR=1.525 GT:AD:DP:GQ:PL 1/1:0,192:192:99:6455,576,0 chr2 130139645 . T C 4207.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.136;ClippingRankSum=0.000;DP=307;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.84;ReadPosRankSum=-0.201;SOR=0.695 GT:AD:DP:GQ:PL 0/1:153,151:304:99:4236,0,4113 chr2 130139661 . C T 3934.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.481;ClippingRankSum=0.000;DP=286;ExcessHet=3.0103;FS=5.524;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.90;ReadPosRankSum=1.125;SOR=0.450 GT:AD:DP:GQ:PL 0/1:138,145:283:99:3963,0,3940 chr2 130139986 . C A 596.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=5.656;ClippingRankSum=0.000;DP=182;ExcessHet=3.0103;FS=17.307;MLEAC=1;MLEAF=0.500;MQ=49.99;MQRankSum=-8.763;QD=3.28;ReadPosRankSum=-1.614;SOR=2.100 GT:AD:DP:GQ:PL 0/1:148,34:182:99:625,0,4226 chr2 130140047 . A G 284.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.220;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=32.818;MLEAC=1;MLEAF=0.500;MQ=57.52;MQRankSum=-9.567;QD=2.26;ReadPosRankSum=0.199;SOR=2.796 GT:AD:DP:GQ:PL 0/1:108,18:126:99:313,0,3418 chr2 130142615 . A G 4069.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.019;ClippingRankSum=0.000;DP=313;ExcessHet=3.0103;FS=1.871;MLEAC=1;MLEAF=0.500;MQ=57.57;MQRankSum=-10.412;QD=13.00;ReadPosRankSum=0.000;SOR=0.827 GT:AD:DP:GQ:PL 0/1:169,144:313:99:4098,0,4576 chr2 130143568 . G A 456.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.432;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=1.594;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.35;ReadPosRankSum=0.645;SOR=0.330 GT:AD:DP:GQ:PL 0/1:18,19:37:99:485,0,538 chr2 130143712 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.00;QD=35.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 130143714 . A T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.00;QD=27.88;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 130143715 . G T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.00;QD=31.82;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 130143730 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.00;QD=36.15;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 130144494 . C T 2937.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.450;ClippingRankSum=0.000;DP=289;ExcessHet=3.0103;FS=0.925;MLEAC=1;MLEAF=0.500;MQ=53.73;MQRankSum=-16.037;QD=10.24;ReadPosRankSum=0.119;SOR=0.634 GT:AD:DP:GQ:PL 0/1:164,123:287:99:2966,0,4422 chr2 130144621 . C T 2761.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.159;ClippingRankSum=0.000;DP=210;ExcessHet=3.0103;FS=1.821;MLEAC=1;MLEAF=0.500;MQ=49.67;MQRankSum=-4.204;QD=13.15;ReadPosRankSum=1.236;SOR=0.552 GT:AD:DP:GQ:PL 0/1:109,101:210:99:2790,0,3192 chr2 130144976 . C T 572.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.843;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=2.393;MLEAC=1;MLEAF=0.500;MQ=41.07;MQRankSum=1.031;QD=18.48;ReadPosRankSum=-0.282;SOR=1.578 GT:AD:DP:GQ:PL 0/1:14,17:31:99:601,0,491 chr2 130153274 . G A 2693.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.302;ClippingRankSum=0.000;DP=222;ExcessHet=3.0103;FS=2.298;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.24;ReadPosRankSum=-0.082;SOR=0.538 GT:AD:DP:GQ:PL 0/1:116,104:220:99:2722,0,3301 chr2 130154941 . A G 266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.259;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.84;MQRankSum=-0.783;QD=14.82;ReadPosRankSum=-0.051;SOR=0.446 GT:AD:DP:GQ:PL 0/1:8,10:18:99:295,0,234 chr2 130155887 . C T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.58;MQRankSum=-1.150;QD=21.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 130157082 . G A 218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.020;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=2.276;MLEAC=1;MLEAF=0.500;MQ=46.08;MQRankSum=-0.625;QD=15.63;ReadPosRankSum=-0.349;SOR=0.959 GT:AD:DP:GQ:PL 0/1:6,8:14:99:247,0,198 chr2 130167515 . C T 1711.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.975;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=0.739;MLEAC=1;MLEAF=0.500;MQ=59.86;MQRankSum=-0.904;QD=15.42;ReadPosRankSum=-0.388;SOR=0.784 GT:AD:DP:GQ:PL 0/1:51,60:111:99:1740,0,1353 chr2 130173246 . C T 2441.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.480;ClippingRankSum=0.000;DP=229;ExcessHet=3.0103;FS=0.488;MLEAC=1;MLEAF=0.500;MQ=47.95;MQRankSum=1.049;QD=10.66;ReadPosRankSum=0.248;SOR=0.740 GT:AD:DP:GQ:PL 0/1:129,100:229:99:2470,0,3532 chr2 130181715 . A G 1871.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.146;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=1.454;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.07;ReadPosRankSum=0.102;SOR=0.569 GT:AD:DP:GQ:PL 0/1:65,68:133:99:1900,0,1804 chr2 130181775 . G A 1165.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.427;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=5.402;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.97;ReadPosRankSum=0.515;SOR=0.240 GT:AD:DP:GQ:PL 0/1:31,42:73:99:1194,0,909 chr2 130182517 . G T 1483.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.421;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.847;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.13;ReadPosRankSum=1.922;SOR=0.543 GT:AD:DP:GQ:PL 0/1:44,48:92:99:1512,0,1391 chr2 130183461 . T G 720.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.191;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=2.427;MLEAC=1;MLEAF=0.500;MQ=47.50;MQRankSum=-2.603;QD=10.15;ReadPosRankSum=-0.104;SOR=1.124 GT:AD:DP:GQ:PL 0/1:46,25:71:99:749,0,1369 chr2 130183492 . T C 3140.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.97;QD=33.06;SOR=1.489 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3169,285,0 chr2 130183868 . C T 2035.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.270;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=0.627;MLEAC=1;MLEAF=0.500;MQ=59.98;MQRankSum=-0.943;QD=14.75;ReadPosRankSum=0.752;SOR=0.627 GT:AD:DP:GQ:PL 0/1:66,72:138:99:2064,0,1774 chr2 130184247 . A G 296.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.610;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.99;ReadPosRankSum=0.964;SOR=0.317 GT:AD:DP:GQ:PL 0/1:17,10:27:99:325,0,573 chr2 130184611 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 130190275 . C T 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=-0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr2 130190314 . G C 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=-1.408;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:256,0,173 chr2 130190730 . T C 1507.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.067;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=3.277;MLEAC=1;MLEAF=0.500;MQ=59.86;MQRankSum=-1.035;QD=16.57;ReadPosRankSum=-1.396;SOR=1.179 GT:AD:DP:GQ:PL 0/1:48,43:91:99:1536,0,1755 chr2 130190754 . G T 844.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.194;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.306;MLEAC=1;MLEAF=0.500;MQ=59.53;MQRankSum=-1.465;QD=15.94;ReadPosRankSum=-1.375;SOR=1.022 GT:AD:DP:GQ:PL 0/1:32,21:53:99:882,0,1095 chr2 130191730 . T C 376.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.878;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.46;ReadPosRankSum=-0.993;SOR=0.741 GT:AD:DP:GQ:PL 0/1:16,12:28:99:405,0,538 chr2 130191838 . G T 2725.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.20;QD=32.07;SOR=0.815 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2754,255,0 chr2 130191918 . G A 1526.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.626;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.29;MQRankSum=-8.554;QD=8.93;ReadPosRankSum=-2.259;SOR=0.723 GT:AD:DP:GQ:PL 0/1:107,64:171:99:1555,0,3023 chr2 130191980 . A G 1792.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.623;ClippingRankSum=0.000;DP=189;ExcessHet=3.0103;FS=7.466;MLEAC=1;MLEAF=0.500;MQ=50.96;MQRankSum=-12.165;QD=9.49;ReadPosRankSum=2.814;SOR=1.060 GT:AD:DP:GQ:PL 0/1:116,73:189:99:1821,0,3377 chr2 130193975 . G A 8130.77 PASS AC=2;AF=1.00;AN=2;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.27;QD=30.78;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,219:219:99:8159,658,0 chr2 130193993 . G A 2777.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.955;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=6.710;MLEAC=1;MLEAF=0.500;MQ=55.81;MQRankSum=-10.128;QD=14.24;ReadPosRankSum=-0.938;SOR=0.368 GT:AD:DP:GQ:PL 0/1:100,95:195:99:2806,0,3274 chr2 130194008 . A G 3536.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.110;ClippingRankSum=0.000;DP=187;ExcessHet=3.0103;FS=4.543;MLEAC=1;MLEAF=0.500;MQ=55.60;MQRankSum=-10.338;QD=18.91;ReadPosRankSum=-0.485;SOR=0.417 GT:AD:DP:GQ:PL 0/1:95,92:187:99:3565,0,3638 chr2 130194011 . T C 3537.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.090;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=6.584;MLEAC=1;MLEAF=0.500;MQ=55.55;MQRankSum=-10.365;QD=19.12;ReadPosRankSum=-0.434;SOR=0.385 GT:AD:DP:GQ:PL 0/1:94,91:185:99:3566,0,3642 chr2 130194181 . G T 1490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.658;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=10.073;MLEAC=1;MLEAF=0.500;MQ=48.35;MQRankSum=-1.716;QD=9.94;ReadPosRankSum=-1.613;SOR=1.306 GT:AD:DP:GQ:PL 0/1:88,62:150:99:1519,0,2328 chr2 130194275 . T C 426.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=4.148;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=38.387;MLEAC=1;MLEAF=0.500;MQ=49.15;MQRankSum=-7.330;QD=4.31;ReadPosRankSum=-0.658;SOR=4.553 GT:AD:DP:GQ:PL 0/1:77,22:99:99:455,0,2236 chr2 130194376 . G A 495.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.017;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=6.323;MLEAC=1;MLEAF=0.500;MQ=51.50;MQRankSum=-7.503;QD=5.51;ReadPosRankSum=0.267;SOR=1.424 GT:AD:DP:GQ:PL 0/1:66,24:90:99:524,0,2040 chr2 130194465 . G A 1043.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.581;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=3.555;MLEAC=1;MLEAF=0.500;MQ=51.34;MQRankSum=-9.929;QD=8.77;ReadPosRankSum=-1.317;SOR=1.096 GT:AD:DP:GQ:PL 0/1:76,43:119:99:1072,0,2201 chr2 130194480 . G C 1010.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.571;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=4.711;MLEAC=1;MLEAF=0.500;MQ=52.55;MQRankSum=-10.428;QD=8.49;ReadPosRankSum=0.495;SOR=1.153 GT:AD:DP:GQ:PL 0/1:77,42:119:99:1039,0,2144 chr2 130194538 . G A 1154.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.318;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=0.682;MLEAC=1;MLEAF=0.500;MQ=54.05;MQRankSum=-9.396;QD=9.31;ReadPosRankSum=-0.390;SOR=0.610 GT:AD:DP:GQ:PL 0/1:71,53:124:99:1183,0,1951 chr2 130194925 . G A 948.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.995;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.36;ReadPosRankSum=-0.294;SOR=0.505 GT:AD:DP:GQ:PL 0/1:39,32:71:99:977,0,1313 chr2 130194967 . C T 1637.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.973;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=1.718;MLEAC=1;MLEAF=0.500;MQ=57.31;MQRankSum=0.022;QD=11.95;ReadPosRankSum=1.099;SOR=0.962 GT:AD:DP:GQ:PL 0/1:78,59:137:99:1666,0,2303 chr2 130195145 . G A 6984.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.650;ClippingRankSum=0.000;DP=422;ExcessHet=3.0103;FS=0.521;MLEAC=1;MLEAF=0.500;MQ=50.39;MQRankSum=-19.003;QD=16.55;ReadPosRankSum=-0.823;SOR=0.682 GT:AD:DP:GQ:PL 0/1:234,188:422:99:7013,0,13767 chr2 130195152 . C T 7013.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.227;ClippingRankSum=0.000;DP=424;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.90;MQRankSum=-19.278;QD=16.54;ReadPosRankSum=1.528;SOR=0.665 GT:AD:DP:GQ:PL 0/1:238,186:424:99:7042,0,13927 chr2 130195449 . T C 248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.623;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.58;ReadPosRankSum=1.546;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,8:15:99:277,0,245 chr2 130202450 . T C 1134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.018;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=0.701;MLEAC=1;MLEAF=0.500;MQ=57.48;MQRankSum=-4.717;QD=10.04;ReadPosRankSum=-0.151;SOR=0.673 GT:AD:DP:GQ:PL 0/1:62,51:113:99:1163,0,1486 chr2 130202539 . A G 804.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.193;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=-0.822;SOR=0.868 GT:AD:DP:GQ:PL 0/1:29,29:58:99:833,0,752 chr2 130212580 . C T 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.86;MQRankSum=-1.068;QD=4.82;ReadPosRankSum=0.712;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr2 130213245 . G A 921.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.857;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=2.369;MLEAC=1;MLEAF=0.500;MQ=50.21;MQRankSum=-0.321;QD=13.17;ReadPosRankSum=-1.654;SOR=1.049 GT:AD:DP:GQ:PL 0/1:39,31:70:99:950,0,1213 chr2 130213316 . G A 2448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.948;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.662;MLEAC=1;MLEAF=0.500;MQ=58.80;MQRankSum=-1.621;QD=18.41;ReadPosRankSum=0.751;SOR=0.813 GT:AD:DP:GQ:PL 0/1:68,65:133:99:2477,0,2892 chr2 130213338 . A G 2801.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.479;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=0.611;MLEAC=1;MLEAF=0.500;MQ=59.90;MQRankSum=-0.960;QD=18.68;ReadPosRankSum=-0.735;SOR=0.623 GT:AD:DP:GQ:PL 0/1:73,77:150:99:2830,0,3045 chr2 130213490 . C T 1582.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.030;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.43;MQRankSum=-8.384;QD=14.01;ReadPosRankSum=0.967;SOR=0.669 GT:AD:DP:GQ:PL 0/1:57,56:113:99:1611,0,1620 chr2 130213520 . C T 1365.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.290;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=1.052;MLEAC=1;MLEAF=0.500;MQ=53.19;MQRankSum=-7.155;QD=18.21;ReadPosRankSum=-1.137;SOR=0.871 GT:AD:DP:GQ:PL 0/1:35,40:75:99:1394,0,1267 chr2 130213542 . T C 1003.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.570;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.06;MQRankSum=-5.764;QD=19.68;ReadPosRankSum=-0.302;SOR=0.650 GT:AD:DP:GQ:PL 0/1:26,25:51:99:1032,0,1068 chr2 130213628 . C G 249.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.020;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.83;MQRankSum=-2.198;QD=17.84;ReadPosRankSum=0.125;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,8:14:99:278,0,218 chr2 130213649 . G T 130.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.09;MQRankSum=-0.566;QD=18.68;ReadPosRankSum=-0.328;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:159,0,114 chr2 130213735 . G A 110.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:138,12,0 chr2 130223626 . G C 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.00;QD=32.86;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr2 130223628 . C G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.50;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 130228553 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=46.27;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 130229904 . G A 4265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.466;ClippingRankSum=0.000;DP=323;ExcessHet=3.0103;FS=1.867;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.25;ReadPosRankSum=1.292;SOR=0.822 GT:AD:DP:GQ:PL 0/1:154,168:322:99:4294,0,3975 chr2 130230219 . G A 12534.77 PASS AC=2;AF=1.00;AN=2;DP=369;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.06;SOR=0.882 GT:AD:DP:GQ:PL 1/1:0,368:368:99:12563,1104,0 chr2 130264735 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 130268653 . A G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.81;MQRankSum=-0.524;QD=16.35;ReadPosRankSum=-0.524;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 130268870 . A G 71.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.056;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=2.009;MLEAC=1;MLEAF=0.500;MQ=52.04;MQRankSum=-3.811;QD=2.56;ReadPosRankSum=1.721;SOR=1.445 GT:AD:DP:GQ:PL 0/1:22,6:28:99:100,0,664 chr2 130268908 . C T 750.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.079;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.97;MQRankSum=4.260;QD=21.45;ReadPosRankSum=-1.579;SOR=0.941 GT:AD:DP:GQ:PL 0/1:10,25:35:99:779,0,170 chr2 130269458 . C G 301.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=43.04;QD=27.43;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:33:330,33,0 chr2 130283721 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.41;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 130285545 . A G 313.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:27:342,27,0 chr2 130293759 . A C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 130293902 . T G 537.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.61;SOR=2.049 GT:AD:DP:GQ:PL 1/1:0,16:16:48:566,48,0 chr2 130294033 . C T 2068.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.32;SOR=1.503 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2097,192,0 chr2 130302716 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 130315358 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 130431168 . A G 384.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.857;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.21;MQRankSum=-0.302;QD=20.25;ReadPosRankSum=0.963;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,14:19:99:413,0,142 chr2 130475044 . G T 255.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.00;QD=28.42;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:284,27,0 chr2 130508957 . C A 5909.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.913;ClippingRankSum=0.000;DP=191;ExcessHet=3.0103;FS=3.649;MLEAC=2;MLEAF=1.00;MQ=56.93;MQRankSum=-0.600;QD=31.10;ReadPosRankSum=-0.499;SOR=0.702 GT:AD:DP:GQ:PL 1/1:1,189:190:99:5938,555,0 chr2 130650119 . T C 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-0.712;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr2 130656488 . A G 264.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.526;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=48.96;MQRankSum=-4.024;QD=13.24;ReadPosRankSum=0.108;SOR=1.765 GT:AD:DP:GQ:PL 0/1:10,10:20:99:293,0,323 chr2 130656500 . T A 337.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.948;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.30;MQRankSum=-4.620;QD=12.99;ReadPosRankSum=-0.381;SOR=1.292 GT:AD:DP:GQ:PL 0/1:13,13:26:99:366,0,397 chr2 130656603 . C T 948.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.006;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.52;MQRankSum=-1.731;QD=12.82;ReadPosRankSum=-0.076;SOR=0.693 GT:AD:DP:GQ:PL 0/1:37,37:74:99:977,0,996 chr2 130656821 . C T 306.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.081;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=42.318;MLEAC=1;MLEAF=0.500;MQ=43.59;MQRankSum=-4.335;QD=2.67;ReadPosRankSum=-0.582;SOR=3.807 GT:AD:DP:GQ:PL 0/1:94,21:115:99:335,0,2819 chr2 130730100 . A C 11639.77 PASS AC=2;AF=1.00;AN=2;DP=356;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.70;SOR=1.166 GT:AD:DP:GQ:PL 1/1:0,356:356:99:11668,1069,0 chr2 130763090 . T C 14688.77 PASS AC=2;AF=1.00;AN=2;DP=434;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.85;SOR=0.830 GT:AD:DP:GQ:PL 1/1:0,434:434:99:14717,1303,0 chr2 130764267 . A G 5883.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.104;ClippingRankSum=0.000;DP=451;ExcessHet=3.0103;FS=1.101;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.05;ReadPosRankSum=-0.207;SOR=0.584 GT:AD:DP:GQ:PL 0/1:224,227:451:99:5912,0,5750 chr2 130826186 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 130826329 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 130914528 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 130914698 . T C 385.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.50;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:414,30,0 chr2 130915377 . A G 4656.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.151;ClippingRankSum=0.000;DP=353;ExcessHet=3.0103;FS=0.384;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.19;ReadPosRankSum=-0.288;SOR=0.706 GT:AD:DP:GQ:PL 0/1:183,170:353:99:4685,0,5107 chr2 130915686 . A G 6169.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.285;ClippingRankSum=0.000;DP=499;ExcessHet=3.0103;FS=1.738;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.41;ReadPosRankSum=-0.453;SOR=0.815 GT:AD:DP:GQ:PL 0/1:271,226:497:99:6198,0,7100 chr2 130915743 . C T 5447.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.702;ClippingRankSum=0.000;DP=462;ExcessHet=3.0103;FS=1.104;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.84;ReadPosRankSum=-0.831;SOR=0.579 GT:AD:DP:GQ:PL 0/1:250,210:460:99:5476,0,6802 chr2 130916129 . G A 1501.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.331;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=0.872;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=-1.495;SOR=0.531 GT:AD:DP:GQ:PL 0/1:60,52:112:99:1530,0,1968 chr2 130916712 . A G 6006.77 PASS AC=2;AF=1.00;AN=2;DP=167;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.66;SOR=1.540 GT:AD:DP:GQ:PL 1/1:0,167:167:99:6035,501,0 chr2 130958422 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 130961909 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 131011664 . G A 3506.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.08;SOR=1.893 GT:AD:DP:GQ:PL 1/1:0,106:106:99:3535,318,0 chr2 131012018 . C T 590.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.91;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:619,48,0 chr2 131028537 . T A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 131028587 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 131029968 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 131033226 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 131055869 . A G 495.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.05;SOR=2.448 GT:AD:DP:GQ:PL 1/1:0,15:15:45:524,45,0 chr2 131094186 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 131177617 . C T 1068.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.954;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=2.506;MLEAC=1;MLEAF=0.500;MQ=57.64;MQRankSum=6.593;QD=24.29;ReadPosRankSum=0.616;SOR=0.182 GT:AD:DP:GQ:PL 0/1:4,40:44:31:1097,0,31 chr2 131177634 . G T 110.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.583;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.30;MQRankSum=-6.512;QD=2.05;ReadPosRankSum=-1.598;SOR=0.423 GT:AD:DP:GQ:PL 0/1:47,7:54:99:139,0,2009 chr2 131191596 . G A 567.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.76;QD=33.40;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,17:17:51:596,51,0 chr2 131195667 . G A 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.358;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.098;MLEAC=1;MLEAF=0.500;MQ=53.94;MQRankSum=0.803;QD=15.14;ReadPosRankSum=-1.240;SOR=1.532 GT:AD:DP:GQ:PL 0/1:9,11:20:99:331,0,214 chr2 131226959 . C G 194.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.748;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=5.433;MLEAC=1;MLEAF=0.500;MQ=50.58;MQRankSum=-4.304;QD=6.28;ReadPosRankSum=2.385;SOR=2.494 GT:AD:DP:GQ:PL 0/1:22,9:31:99:223,0,713 chr2 131228115 . A G 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.20;MQRankSum=-2.744;QD=2.80;ReadPosRankSum=0.955;SOR=0.180 GT:AD:DP:GQ:PL 0/1:8,3:11:59:59,0,301 chr2 131274272 . T C 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.69;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr2 131285865 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.02;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 131287419 . T C 426.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.72;QD=25.90;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,12:12:36:455,36,0 chr2 131287525 . C G 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=42.86;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr2 131297102 . T C 138.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.74;QD=34.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:166,12,0 chr2 131302240 . G A 461.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.28;QD=30.78;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,15:15:45:490,45,0 chr2 131335360 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 131335426 . T C 487.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.84;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:516,42,0 chr2 131352550 . G A 1630.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.75;QD=30.01;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1659,129,0 chr2 131352890 . G C 1043.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.79;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1072,90,0 chr2 131353548 . G A 1107.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.62;QD=31.86;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1136,78,0 chr2 131353550 . T C 1107.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.83;QD=27.57;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,24:24:78:1136,78,0 chr2 131353554 . G T 1051.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=41.83;QD=29.43;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,24:24:72:1080,72,0 chr2 131354544 . A T 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.71;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr2 131354556 . G T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 131355530 . T C 224.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.11;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:253,21,0 chr2 131355990 . G A 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.31;QD=30.74;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr2 131355994 . T A 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.31;QD=32.90;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr2 131360175 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 131363777 . G C 133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.650;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=16.935;MLEAC=1;MLEAF=0.500;MQ=41.90;MQRankSum=1.924;QD=2.91;ReadPosRankSum=1.164;SOR=0.838 GT:AD:DP:GQ:PL 0/1:38,8:46:99:162,0,990 chr2 131363986 . G A 96.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.02;QD=32.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:124,9,0 chr2 131386804 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.46;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 131387183 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.28;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 131390477 . G C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.52;MQRankSum=-0.842;QD=9.35;ReadPosRankSum=0.524;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,262 chr2 131390492 . A C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.25;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,233 chr2 131390501 . G T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.25;MQRankSum=-1.383;QD=12.44;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,233 chr2 131399214 . G A 358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.649;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.01;MQRankSum=-1.398;QD=18.88;ReadPosRankSum=-0.866;SOR=0.412 GT:AD:DP:GQ:PL 0/1:4,15:19:76:387,0,76 chr2 131460977 . C G 575.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.085;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=1.316;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.76;ReadPosRankSum=0.658;SOR=0.407 GT:AD:DP:GQ:PL 0/1:38,21:59:99:604,0,1165 chr2 131489088 . G C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.90;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 131489102 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.74;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 131491011 . T C 4417.77 PASS AC=2;AF=1.00;AN=2;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.47;QD=30.21;SOR=1.374 GT:AD:DP:GQ:PL 1/1:0,123:123:99:4446,370,0 chr2 131491303 . A G 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.093;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.83;MQRankSum=-5.410;QD=2.61;ReadPosRankSum=-1.843;SOR=0.693 GT:AD:DP:GQ:PL 0/1:26,5:31:99:109,0,913 chr2 131491799 . C T 2047.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.75;QD=33.03;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2076,186,0 chr2 131493314 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.04;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 131500686 . C T 1859.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.093;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.53;MQRankSum=-2.197;QD=13.67;ReadPosRankSum=0.114;SOR=0.736 GT:AD:DP:GQ:PL 0/1:67,69:136:99:1888,0,1797 chr2 131501507 . A G 850.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.613;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=2.544;MLEAC=1;MLEAF=0.500;MQ=59.32;MQRankSum=-0.311;QD=15.75;ReadPosRankSum=1.780;SOR=1.121 GT:AD:DP:GQ:PL 0/1:25,29:54:99:879,0,696 chr2 131515918 . C T 166.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.335;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.06;MQRankSum=0.741;QD=15.16;ReadPosRankSum=-1.419;SOR=0.941 GT:AD:DP:GQ:PL 0/1:5,6:11:99:195,0,132 chr2 131516005 . C T 478.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.615;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=6.923;MLEAC=1;MLEAF=0.500;MQ=58.65;MQRankSum=1.613;QD=18.41;ReadPosRankSum=0.788;SOR=2.876 GT:AD:DP:GQ:PL 0/1:12,14:26:99:507,0,379 chr2 131517793 . A G 3025.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.445;ClippingRankSum=0.000;DP=319;ExcessHet=3.0103;FS=1.361;MLEAC=1;MLEAF=0.500;MQ=55.51;MQRankSum=-13.603;QD=9.49;ReadPosRankSum=0.411;SOR=0.596 GT:AD:DP:GQ:PL 0/1:193,126:319:99:3054,0,5408 chr2 131517811 . T C 3147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.370;ClippingRankSum=0.000;DP=307;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.58;MQRankSum=-14.719;QD=10.25;ReadPosRankSum=-2.205;SOR=0.705 GT:AD:DP:GQ:PL 0/1:185,122:307:99:3176,0,5259 chr2 131517823 . T C 3975.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.338;ClippingRankSum=0.000;DP=292;ExcessHet=3.0103;FS=3.348;MLEAC=1;MLEAF=0.500;MQ=54.11;MQRankSum=-15.957;QD=13.62;ReadPosRankSum=-1.651;SOR=0.890 GT:AD:DP:GQ:PL 0/1:183,109:292:99:4004,0,10001 chr2 131517830 . C A 3907.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.150;ClippingRankSum=0.000;DP=292;ExcessHet=3.0103;FS=4.132;MLEAC=1;MLEAF=0.500;MQ=53.93;MQRankSum=-16.290;QD=13.38;ReadPosRankSum=-1.223;SOR=0.955 GT:AD:DP:GQ:PL 0/1:184,108:292:99:3936,0,9916 chr2 131518716 . G C 936.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.727;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=3.687;MLEAC=1;MLEAF=0.500;MQ=58.99;MQRankSum=-0.390;QD=13.58;ReadPosRankSum=-0.793;SOR=0.346 GT:AD:DP:GQ:PL 0/1:35,34:69:99:965,0,1053 chr2 131529996 . G A 3710.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.599;ClippingRankSum=0.000;DP=274;ExcessHet=3.0103;FS=0.930;MLEAC=1;MLEAF=0.500;MQ=53.98;MQRankSum=0.838;QD=13.54;ReadPosRankSum=-0.294;SOR=0.776 GT:AD:DP:GQ:PL 0/1:135,139:274:99:3739,0,3476 chr2 131535218 . T C 136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=1.416;MLEAC=1;MLEAF=0.500;MQ=57.33;MQRankSum=-5.507;QD=2.91;ReadPosRankSum=2.971;SOR=1.148 GT:AD:DP:GQ:PL 0/1:36,11:47:99:165,0,1088 chr2 131573163 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 131589765 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 131590811 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.29;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 131590815 . G T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.07;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 131591649 . A C 2485.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.72;SOR=2.876 GT:AD:DP:GQ:PL 1/1:0,54:54:99:2514,169,0 chr2 131591651 . G C 2485.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.58;SOR=2.958 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2514,169,0 chr2 131591840 . G A 3212.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.88;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,89:89:99:3241,267,0 chr2 131596792 . G C 2362.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.91;QD=31.09;SOR=1.519 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2391,228,0 chr2 131596906 . C A 3654.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.17;QD=32.63;SOR=0.729 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3683,336,0 chr2 131597013 . A G 4128.77 PASS AC=2;AF=1.00;AN=2;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=47.10;QD=32.02;SOR=1.093 GT:AD:DP:GQ:PL 1/1:0,116:116:99:4157,348,0 chr2 131597234 . C T 1860.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.63;QD=29.60;SOR=3.215 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1889,153,0 chr2 131597280 . C G 919.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.18;QD=24.61;SOR=6.358 GT:AD:DP:GQ:PL 1/1:0,23:23:69:948,69,0 chr2 131597875 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 131598850 . T G 80.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.07;QD=26.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0 chr2 131600094 . A G 312.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.49;QD=28.43;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:33:341,33,0 chr2 131601338 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.61;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 131601461 . A G 883.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.80;QD=29.46;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,30:30:90:912,90,0 chr2 131601490 . A G 1050.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.10;QD=30.90;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1079,102,0 chr2 131601516 . C A 1053.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.43;QD=31.93;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1082,99,0 chr2 131601612 . T C 503.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.53;QD=31.49;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,16:16:48:532,48,0 chr2 131601690 . T C 264.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.03;QD=33.10;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:293,24,0 chr2 131601775 . T C 104.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.18;QD=34.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:132,9,0 chr2 131601784 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.61;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 131601817 . T C 57.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.61;QD=28.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:85,6,0 chr2 131601818 . G A 57.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.00;QD=31.41;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:85,6,0 chr2 131603970 . A G 174.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.14;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:203,18,0 chr2 131605711 . A G 321.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.18;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,10:10:30:350,30,0 chr2 131605759 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 131609350 . G T 1182.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.29;QD=29.57;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1211,120,0 chr2 131609421 . A G 1546.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.18;QD=30.94;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1575,150,0 chr2 131611398 . C T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.37;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 131611605 . T C 2285.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.19;SOR=0.840 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2314,213,0 chr2 131611759 . C T 969.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.63;SOR=2.468 GT:AD:DP:GQ:PL 1/1:0,28:28:84:998,84,0 chr2 131611867 . A C 215.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.15;QD=31.28;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:244,18,0 chr2 131611903 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.16;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 131626766 . C T 3098.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.86;QD=32.97;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,94:94:99:3127,282,0 chr2 131627109 . T C 4375.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.33;QD=30.93;SOR=1.361 GT:AD:DP:GQ:PL 1/1:0,98:98:99:4404,295,0 chr2 131627110 . T G 4375.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.30;QD=29.28;SOR=1.337 GT:AD:DP:GQ:PL 1/1:0,97:97:99:4404,295,0 chr2 131657510 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 131723579 . A T 160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.094;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.40;ReadPosRankSum=0.000;SOR=0.760 GT:AD:DP:GQ:PL 0/1:7,5:12:99:189,0,428 chr2 131723580 . T C 160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.094;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.40;ReadPosRankSum=0.000;SOR=0.760 GT:AD:DP:GQ:PL 0/1:7,5:12:99:189,0,428 chr2 131723672 . T G 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.691;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=1.740;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.27;ReadPosRankSum=-0.069;SOR=0.330 GT:AD:DP:GQ:PL 0/1:11,10:21:99:286,0,294 chr2 131723853 . G C 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=8.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.328;SOR=2.788 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr2 131723897 . C T 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.40;ReadPosRankSum=-0.876;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,2:7:66:66,0,154 chr2 131723953 . C A 167.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.96;ReadPosRankSum=-0.674;SOR=0.707 GT:AD:DP:GQ:PL 0/1:1,5:6:27:196,0,27 chr2 131723956 . C T 167.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.96;ReadPosRankSum=-0.674;SOR=0.707 GT:AD:DP:GQ:PL 0/1:1,5:6:27:196,0,27 chr2 131733971 . C G 665.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.74;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,24:24:72:694,72,0 chr2 131736598 . G A 179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.548;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=4.467;MLEAC=1;MLEAF=0.500;MQ=53.91;MQRankSum=-0.566;QD=11.24;ReadPosRankSum=1.863;SOR=0.525 GT:AD:DP:GQ:PL 0/1:7,9:16:99:208,0,306 chr2 131736609 . G C 191.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.479;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=1.957;MLEAC=1;MLEAF=0.500;MQ=54.62;MQRankSum=0.917;QD=10.65;ReadPosRankSum=-2.170;SOR=1.324 GT:AD:DP:GQ:PL 0/1:9,9:18:99:220,0,314 chr2 131736699 . A G 329.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.33;QD=29.98;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:33:358,33,0 chr2 131750579 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 131759495 . A G 719.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.93;QD=32.72;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:66:748,66,0 chr2 131759721 . A G 891.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.34;QD=34.30;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:78:920,78,0 chr2 131800762 . G T 841.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.571;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=4.745;MLEAC=1;MLEAF=0.500;MQ=59.44;MQRankSum=1.779;QD=13.58;ReadPosRankSum=-1.153;SOR=0.204 GT:AD:DP:GQ:PL 0/1:31,31:62:99:870,0,975 chr2 131827985 . C T 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.009;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.25;ReadPosRankSum=-2.015;SOR=1.075 GT:AD:DP:GQ:PL 0/1:9,6:15:99:137,0,229 chr2 131828025 . A G 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.344;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=1.987;MLEAC=1;MLEAF=0.500;MQ=58.99;MQRankSum=-0.776;QD=9.24;ReadPosRankSum=1.127;SOR=1.329 GT:AD:DP:GQ:PL 0/1:9,7:16:99:176,0,226 chr2 131828217 . A G 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.611;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=56.55;MQRankSum=-0.921;QD=19.60;ReadPosRankSum=0.703;SOR=1.901 GT:AD:DP:GQ:PL 0/1:3,5:8:67:185,0,67 chr2 131828270 . C G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 131829101 . C G 497.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.124;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=1.497;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.59;ReadPosRankSum=1.026;SOR=0.387 GT:AD:DP:GQ:PL 0/1:11,19:30:99:526,0,261 chr2 131829380 . C T 90.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.306;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=11.139;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.67;ReadPosRankSum=1.742;SOR=3.231 GT:AD:DP:GQ:PL 0/1:12,4:16:99:119,0,314 chr2 131829476 . C A 121.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.501;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.18;ReadPosRankSum=-0.623;SOR=0.892 GT:AD:DP:GQ:PL 0/1:6,4:10:99:150,0,313 chr2 131829484 . A C 124.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.86;ReadPosRankSum=-1.383;SOR=1.179 GT:AD:DP:GQ:PL 0/1:5,4:9:99:153,0,275 chr2 131829540 . G T 85.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=15.441;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.25;ReadPosRankSum=-0.566;SOR=3.221 GT:AD:DP:GQ:PL 0/1:3,4:7:99:114,0,105 chr2 131830124 . C G 324.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.637;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.77;MQRankSum=-0.059;QD=7.55;ReadPosRankSum=0.947;SOR=0.896 GT:AD:DP:GQ:PL 0/1:29,14:43:99:353,0,741 chr2 131830173 . C T 218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.915;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=3.909;MLEAC=1;MLEAF=0.500;MQ=59.63;MQRankSum=0.281;QD=8.41;ReadPosRankSum=1.663;SOR=0.217 GT:AD:DP:GQ:PL 0/1:15,11:26:99:247,0,481 chr2 131832067 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 131832073 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 131832075 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 131833703 . T C 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.650;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=1.987;MLEAC=1;MLEAF=0.500;MQ=55.05;MQRankSum=-2.770;QD=18.92;ReadPosRankSum=-0.570;SOR=0.307 GT:AD:DP:GQ:PL 0/1:6,10:16:99:331,0,168 chr2 131833905 . T C 197.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.72;ReadPosRankSum=-0.619;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,6:8:59:226,0,59 chr2 131834605 . T C 2134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.594;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=1.303;MLEAC=1;MLEAF=0.500;MQ=58.21;MQRankSum=-5.763;QD=14.14;ReadPosRankSum=1.018;SOR=0.564 GT:AD:DP:GQ:PL 0/1:75,76:151:99:2163,0,1934 chr2 131834830 . T C 1034.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.760;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.58;MQRankSum=-4.823;QD=13.27;ReadPosRankSum=-0.391;SOR=0.779 GT:AD:DP:GQ:PL 0/1:41,37:78:99:1063,0,1067 chr2 131834886 . G A 544.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.088;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=1.448;MLEAC=1;MLEAF=0.500;MQ=57.28;MQRankSum=-4.803;QD=13.97;ReadPosRankSum=0.183;SOR=0.432 GT:AD:DP:GQ:PL 0/1:20,19:39:99:573,0,613 chr2 131834925 . A C 323.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.071;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.87;MQRankSum=-2.872;QD=14.08;ReadPosRankSum=-1.451;SOR=0.368 GT:AD:DP:GQ:PL 0/1:11,12:23:99:352,0,356 chr2 131835605 . C T 738.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.388;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=1.599;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.73;ReadPosRankSum=-0.751;SOR=0.446 GT:AD:DP:GQ:PL 0/1:10,24:34:99:767,0,247 chr2 131835872 . G A 965.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.400;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.817;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.23;ReadPosRankSum=1.153;SOR=0.549 GT:AD:DP:GQ:PL 0/1:47,39:86:99:994,0,1284 chr2 131835946 . A G 886.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.378;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=4.632;MLEAC=1;MLEAF=0.500;MQ=59.78;MQRankSum=-1.076;QD=12.49;ReadPosRankSum=-1.013;SOR=0.796 GT:AD:DP:GQ:PL 0/1:39,32:71:99:915,0,1089 chr2 131836063 . C T 560.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.658;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=3.142;MLEAC=1;MLEAF=0.500;MQ=59.87;MQRankSum=-2.013;QD=7.10;ReadPosRankSum=0.342;SOR=0.996 GT:AD:DP:GQ:PL 0/1:53,26:79:99:589,0,1403 chr2 131836506 . C A 594.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.461;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.400;MLEAC=1;MLEAF=0.500;MQ=59.80;MQRankSum=-0.836;QD=14.51;ReadPosRankSum=1.095;SOR=1.044 GT:AD:DP:GQ:PL 0/1:18,23:41:99:623,0,493 chr2 132037738 . A C 126.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.015;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=0.812;SOR=0.804 GT:AD:DP:GQ:PL 0/1:3,6:9:64:155,0,64 chr2 132037865 . T A 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.037;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=5.434;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.91;ReadPosRankSum=-0.857;SOR=1.472 GT:AD:DP:GQ:PL 0/1:6,7:13:99:170,0,144 chr2 132037887 . T G 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.741;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=2.463;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.98;ReadPosRankSum=-1.316;SOR=1.206 GT:AD:DP:GQ:PL 0/1:5,6:11:99:149,0,142 chr2 132037910 . T C 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.389;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.25;ReadPosRankSum=-0.191;SOR=1.022 GT:AD:DP:GQ:PL 0/1:6,5:11:99:108,0,149 chr2 132157464 . T C 139.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.998;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=0.057;SOR=1.371 GT:AD:DP:GQ:PL 0/1:7,5:12:99:168,0,220 chr2 132198995 . T A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 132244025 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 132244081 . C A 87.28 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.43;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:9:115,9,0 chr2 132244089 . T A 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr2 132244118 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 132244128 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 132244161 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 132244162 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 132244189 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 132244199 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 132244210 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 132244222 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 132244223 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 132278046 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.08;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 132278057 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.74;MQRankSum=-0.431;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:36:81,0,36 chr2 132278060 . A C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.74;MQRankSum=-0.431;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:36:81,0,36 chr2 132278061 . A C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=52.74;MQRankSum=-0.431;QD=17.59;ReadPosRankSum=0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:36:81,0,36 chr2 132280239 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 132309306 . G A 146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.604;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=1.971;MLEAC=1;MLEAF=0.500;MQ=48.65;MQRankSum=-3.025;QD=6.67;ReadPosRankSum=1.557;SOR=1.229 GT:AD:DP:GQ:PL 0/1:16,6:22:99:175,0,432 chr2 132309476 . T C 129.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=52.86;QD=32.26;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:157,12,0 chr2 132332679 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.00;QD=26.03;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 132332694 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.00;QD=28.22;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 132393409 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 132645023 . A C 737.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.337;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=2.144;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.18;ReadPosRankSum=0.899;SOR=1.034 GT:AD:DP:GQ:PL 0/1:39,27:66:99:766,0,1010 chr2 132645034 . C T 1147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.432;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.17;ReadPosRankSum=-1.435;SOR=0.671 GT:AD:DP:GQ:PL 0/1:30,41:71:99:1176,0,891 chr2 132645860 . G A 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=0.409;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,140 chr2 132646650 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 132668339 . C T 1425.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.089;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=2.411;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.80;ReadPosRankSum=-2.098;SOR=0.465 GT:AD:DP:GQ:PL 0/1:72,60:132:99:1454,0,2046 chr2 132668610 . G C 825.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.102;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.29;ReadPosRankSum=-1.470;SOR=1.073 GT:AD:DP:GQ:PL 0/1:27,27:54:99:854,0,886 chr2 132781887 . A T 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-0.765;SOR=1.609 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr2 132781993 . G A 343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=0.914;SOR=0.765 GT:AD:DP:GQ:PL 0/1:10,13:23:99:372,0,279 chr2 132783871 . T C 2585.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.082;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=2.904;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.24;ReadPosRankSum=-0.066;SOR=0.534 GT:AD:DP:GQ:PL 0/1:81,69:150:99:2614,0,4507 chr2 132783881 . A G 2590.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.345;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=1.991;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.50;ReadPosRankSum=0.844;SOR=0.601 GT:AD:DP:GQ:PL 0/1:88,69:157:99:2619,0,4613 chr2 132784002 . C T 2423.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.485;ClippingRankSum=0.000;DP=182;ExcessHet=3.0103;FS=0.542;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.32;ReadPosRankSum=-1.257;SOR=0.644 GT:AD:DP:GQ:PL 0/1:89,93:182:99:2452,0,2614 chr2 132784441 . T C 2479.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.077;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=1.213;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.94;ReadPosRankSum=0.677;SOR=0.700 GT:AD:DP:GQ:PL 0/1:81,85:166:99:2508,0,2091 chr2 132784972 . G A 2607.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.594;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=0.556;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.57;ReadPosRankSum=0.658;SOR=0.754 GT:AD:DP:GQ:PL 0/1:82,97:179:99:2636,0,2315 chr2 132786475 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:66:81,0,66 chr2 132786476 . G C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:66:81,0,66 chr2 132796715 . A G 1408.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.31;SOR=1.280 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1437,135,0 chr2 132869133 . T C 179.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.20;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:208,15,0 chr2 132926085 . G T 309.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.145;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=-1.537;SOR=0.836 GT:AD:DP:GQ:PL 0/1:10,13:23:99:338,0,234 chr2 132963596 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 132963974 . G A 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=0.180;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:131,0,143 chr2 133174717 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 133589052 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 133596135 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 133833769 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 134089182 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 134127129 . G A 801.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.123;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.53;ReadPosRankSum=1.873;SOR=0.606 GT:AD:DP:GQ:PL 0/1:33,31:64:99:830,0,882 chr2 134145214 . C G 45.14 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.05;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:81,9,0 chr2 134236474 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 134236497 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 134236509 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 134238038 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 134318475 . T G 355.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.75;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:384,30,0 chr2 134318519 . C T 719.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.16;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,18:18:54:748,54,0 chr2 134318540 . C G 1001.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.06;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1030,78,0 chr2 134318988 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 134319825 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 134336533 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 134338526 . T C 479.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.33;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,13:13:39:508,39,0 chr2 134345171 . A G 132.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.027;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.409;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.32;ReadPosRankSum=0.041;SOR=0.193 GT:AD:DP:GQ:PL 0/1:14,7:21:99:161,0,439 chr2 134403184 . G A 1417.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.112;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=8.162;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.92;ReadPosRankSum=-1.570;SOR=0.904 GT:AD:DP:GQ:PL 0/1:47,48:95:99:1446,0,1323 chr2 134442145 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 134445591 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 134450642 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 134458370 . G A 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.223;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.318;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.27;ReadPosRankSum=0.424;SOR=0.260 GT:AD:DP:GQ:PL 0/1:11,10:21:99:286,0,396 chr2 134499015 . T G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 134499664 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 134503718 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 134649715 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 134649722 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 134741354 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 134810525 . C G 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr2 134845031 . T A 1791.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.914;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=5.536;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.33;ReadPosRankSum=0.147;SOR=0.317 GT:AD:DP:GQ:PL 0/1:59,66:125:99:1820,0,1770 chr2 134859051 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=1.036;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 134859065 . C G 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=0.431;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr2 134863986 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.85;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:75:75,0,75 chr2 134872357 . C T 881.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.345;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=2.742;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.00;ReadPosRankSum=-1.293;SOR=1.245 GT:AD:DP:GQ:PL 0/1:19,30:49:99:910,0,510 chr2 134936809 . C T 379.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.554;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=1.799;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.19;ReadPosRankSum=-1.292;SOR=0.362 GT:AD:DP:GQ:PL 0/1:11,14:25:99:408,0,318 chr2 134947988 . G A 1266.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.24;SOR=2.012 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1295,111,0 chr2 134952752 . A G 861.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.691;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.872;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.05;ReadPosRankSum=0.446;SOR=0.512 GT:AD:DP:GQ:PL 0/1:39,39:78:99:890,0,952 chr2 134953946 . C T 1129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.713;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=1.027;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.15;ReadPosRankSum=-2.498;SOR=0.556 GT:AD:DP:GQ:PL 0/1:23,36:59:99:1158,0,716 chr2 134954087 . G A 3359.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.459;ClippingRankSum=0.000;DP=274;ExcessHet=3.0103;FS=0.947;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.26;ReadPosRankSum=-0.396;SOR=0.619 GT:AD:DP:GQ:PL 0/1:139,135:274:99:3388,0,3604 chr2 134959410 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 134959412 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 134964573 . A C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:32:75,0,32 chr2 134983293 . C A 1526.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.956;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.75;ReadPosRankSum=-0.538;SOR=0.724 GT:AD:DP:GQ:PL 0/1:53,58:111:99:1555,0,1306 chr2 134983491 . G A 767.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.609;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=5.153;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.69;ReadPosRankSum=0.447;SOR=0.217 GT:AD:DP:GQ:PL 0/1:12,27:39:99:796,0,350 chr2 134983855 . C A 976.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.223;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=4.196;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.23;ReadPosRankSum=0.566;SOR=1.207 GT:AD:DP:GQ:PL 0/1:50,37:87:99:1005,0,1291 chr2 134986437 . T C 1747.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.587;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.42;ReadPosRankSum=0.252;SOR=0.667 GT:AD:DP:GQ:PL 0/1:84,69:153:99:1776,0,2331 chr2 134986846 . C G 1586.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.546;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=4.879;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.41;ReadPosRankSum=-0.243;SOR=0.894 GT:AD:DP:GQ:PL 0/1:43,60:103:99:1615,0,1112 chr2 134987559 . G A 1929.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.320;ClippingRankSum=0.000;DP=168;ExcessHet=3.0103;FS=4.567;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.56;ReadPosRankSum=-0.310;SOR=0.420 GT:AD:DP:GQ:PL 0/1:91,76:167:99:1958,0,2469 chr2 134987975 . C T 1266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.254;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.33;ReadPosRankSum=-0.422;SOR=0.776 GT:AD:DP:GQ:PL 0/1:49,46:95:99:1295,0,1374 chr2 134988152 . A G 1513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.061;ClippingRankSum=0.000;DP=145;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.59;ReadPosRankSum=0.559;SOR=0.727 GT:AD:DP:GQ:PL 0/1:86,57:143:99:1542,0,2279 chr2 135115076 . C A 406.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.187;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.49;ReadPosRankSum=-0.276;SOR=0.874 GT:AD:DP:GQ:PL 0/1:10,12:22:99:435,0,339 chr2 135124086 . T C 901.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.313;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.02;ReadPosRankSum=2.621;SOR=0.753 GT:AD:DP:GQ:PL 0/1:40,35:75:99:930,0,1070 chr2 135130198 . C T 391.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.038;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=-1.008;SOR=0.560 GT:AD:DP:GQ:PL 0/1:15,13:28:99:420,0,493 chr2 135153852 . T C 1615.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.021;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=0.656;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.07;ReadPosRankSum=-0.322;SOR=0.790 GT:AD:DP:GQ:PL 0/1:84,62:146:99:1644,0,2274 chr2 135164720 . C A 3027.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.236;ClippingRankSum=0.000;DP=242;ExcessHet=3.0103;FS=2.841;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.51;ReadPosRankSum=1.229;SOR=0.518 GT:AD:DP:GQ:PL 0/1:122,120:242:99:3056,0,3078 chr2 135168952 . G A 109.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.20;ReadPosRankSum=-0.566;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:138,0,182 chr2 135403522 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 135649909 . A G 609.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.508;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.971;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.02;ReadPosRankSum=0.355;SOR=0.894 GT:AD:DP:GQ:PL 0/1:52,24:76:99:638,0,1484 chr2 135652004 . A C 861.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.008;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=-1.413;SOR=0.623 GT:AD:DP:GQ:PL 0/1:34,30:64:99:890,0,1031 chr2 135661171 . T C 326.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.453;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=-0.069;SOR=0.602 GT:AD:DP:GQ:PL 0/1:11,10:21:99:355,0,362 chr2 135665214 . C T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=1.579;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,145 chr2 135680508 . G A 305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.84;ReadPosRankSum=0.221;SOR=1.329 GT:AD:DP:GQ:PL 0/1:5,9:14:99:334,0,167 chr2 135709594 . C A 438.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.57;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:467,36,0 chr2 135747976 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 135754005 . A G 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=1.383;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,140 chr2 135754381 . G C 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=0.545;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr2 135782513 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 135788274 . C G 2720.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.50;SOR=2.524 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2749,231,0 chr2 135788540 . A G 648.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.498;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.07;ReadPosRankSum=0.425;SOR=0.957 GT:AD:DP:GQ:PL 0/1:17,21:38:99:677,0,508 chr2 135789497 . A G 892.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.737;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=2.122;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.66;ReadPosRankSum=-1.755;SOR=1.552 GT:AD:DP:GQ:PL 0/1:30,27:57:99:921,0,1013 chr2 135790546 . G C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.33;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 135790599 . A G 563.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.85;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:592,45,0 chr2 135790622 . G A 731.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.85;SOR=3.160 GT:AD:DP:GQ:PL 1/1:0,21:21:63:760,63,0 chr2 135793236 . G C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 135794956 . A C 601.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.70;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:630,42,0 chr2 135795059 . A T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 135797914 . T C 1197.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.050;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=3.514;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.31;ReadPosRankSum=-0.400;SOR=1.176 GT:AD:DP:GQ:PL 0/1:49,41:90:99:1226,0,1514 chr2 135798089 . T C 3565.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.545;ClippingRankSum=0.000;DP=242;ExcessHet=3.0103;FS=0.987;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.80;ReadPosRankSum=0.347;SOR=0.766 GT:AD:DP:GQ:PL 0/1:107,134:241:99:3594,0,2767 chr2 135800587 . C T 1747.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.943;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=6.028;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.33;ReadPosRankSum=-0.472;SOR=0.264 GT:AD:DP:GQ:PL 0/1:47,60:107:99:1776,0,1388 chr2 135803987 . G A 6659.77 PASS AC=2;AF=1.00;AN=2;DP=212;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.41;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,212:212:99:6688,635,0 chr2 135804902 . G A 5449.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.475;ClippingRankSum=0.000;DP=371;ExcessHet=3.0103;FS=5.375;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.73;ReadPosRankSum=0.910;SOR=0.484 GT:AD:DP:GQ:PL 0/1:169,201:370:99:5478,0,4364 chr2 135805243 . T C 593.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.74;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:622,45,0 chr2 135807458 . C G 2804.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.25;SOR=3.174 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2833,237,0 chr2 135810063 . A G 723.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.06;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:752,54,0 chr2 135812278 . C A 428.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.335;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.83;ReadPosRankSum=-0.133;SOR=0.848 GT:AD:DP:GQ:PL 0/1:17,14:31:99:457,0,514 chr2 135813043 . A T 946.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.084;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=4.331;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.13;ReadPosRankSum=0.481;SOR=1.494 GT:AD:DP:GQ:PL 0/1:34,33:67:99:975,0,1014 chr2 135817629 . G T 5629.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.690;ClippingRankSum=0.000;DP=442;ExcessHet=3.0103;FS=3.221;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.74;ReadPosRankSum=0.339;SOR=0.855 GT:AD:DP:GQ:PL 0/1:228,214:442:99:5658,0,5991 chr2 135817964 . T C 6738.77 PASS AC=2;AF=1.00;AN=2;DP=209;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.24;SOR=0.803 GT:AD:DP:GQ:PL 1/1:0,209:209:99:6767,627,0 chr2 135818596 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 135818601 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 135823784 . T G 774.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.58;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:803,60,0 chr2 135824278 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 135829388 . C A 366.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.30;ReadPosRankSum=-0.286;SOR=1.022 GT:AD:DP:GQ:PL 0/1:8,11:19:99:395,0,277 chr2 135832988 . C T 817.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.204;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=6.387;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=-1.570;SOR=1.379 GT:AD:DP:GQ:PL 0/1:39,31:70:99:846,0,1098 chr2 135836588 . G A 4844.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.072;ClippingRankSum=0.000;DP=424;ExcessHet=3.0103;FS=2.488;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.43;ReadPosRankSum=-0.843;SOR=0.525 GT:AD:DP:GQ:PL 0/1:234,190:424:99:4873,0,6513 chr2 135853028 . A G 726.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.973;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=3.253;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.25;ReadPosRankSum=-0.049;SOR=0.283 GT:AD:DP:GQ:PL 0/1:24,27:51:99:755,0,702 chr2 135856685 . G A 1111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.420;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=4.580;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.44;ReadPosRankSum=0.420;SOR=1.270 GT:AD:DP:GQ:PL 0/1:34,43:77:99:1140,0,1018 chr2 135857652 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 135865255 . A G 557.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.99;SOR=1.493 GT:AD:DP:GQ:PL 1/1:0,18:18:54:586,54,0 chr2 135870613 . C G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 135876201 . T C 697.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.161;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.89;ReadPosRankSum=0.781;SOR=0.880 GT:AD:DP:GQ:PL 0/1:18,21:39:99:726,0,512 chr2 135879780 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 135898050 . G A 292.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.472;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.15;ReadPosRankSum=-0.972;SOR=0.512 GT:AD:DP:GQ:PL 0/1:18,14:32:99:321,0,471 chr2 135914231 . G C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 135924704 . A T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.524;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 135983330 . T C 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.908;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=0.524;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,8:16:99:218,0,252 chr2 136008381 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 136053693 . C T 104.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:132,9,0 chr2 136053707 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 136089261 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 136103170 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.45;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 136154102 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 136202619 . G A 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.242;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=2.103;MLEAC=1;MLEAF=0.500;MQ=55.96;MQRankSum=-4.496;QD=3.03;ReadPosRankSum=-2.216;SOR=1.302 GT:AD:DP:GQ:PL 0/1:18,4:22:95:95,0,723 chr2 136243962 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 136244011 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 136329232 . G T 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=0.060;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr2 136329578 . G T 1894.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.044;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=26.792;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.79;ReadPosRankSum=0.652;SOR=0.491 GT:AD:DP:GQ:PL 0/1:44,76:120:99:1923,0,1092 chr2 136329754 . A G 2746.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.09;SOR=1.048 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2775,249,0 chr2 136330006 . A G 137.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:165,12,0 chr2 136431842 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 136442191 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 136670540 . G A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 136790874 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 136882046 . C T 607.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.03;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:636,48,0 chr2 136923281 . C T 62.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:90,9,0 chr2 137056907 . C G 1633.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.528;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=1.998;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.21;ReadPosRankSum=0.031;SOR=0.898 GT:AD:DP:GQ:PL 0/1:92,68:160:99:1662,0,2346 chr2 137115422 . A G 179.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.68;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:208,15,0 chr2 137242409 . G C 366.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.128;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=-0.233;SOR=0.616 GT:AD:DP:GQ:PL 0/1:15,14:29:99:395,0,437 chr2 137242656 . T C 1288.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.91;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1317,114,0 chr2 137272701 . G A 508.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.290;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.48;ReadPosRankSum=0.880;SOR=0.854 GT:AD:DP:GQ:PL 0/1:39,21:60:99:537,0,1123 chr2 137405821 . T C 2474.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.75;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2503,201,0 chr2 137411588 . T C 1990.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.60;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,54:54:99:2019,162,0 chr2 137451061 . G T 1439.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.374;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=1.321;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.22;ReadPosRankSum=-0.573;SOR=1.054 GT:AD:DP:GQ:PL 0/1:34,45:79:99:1468,0,1034 chr2 137479468 . C T 2660.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.45;SOR=1.220 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2689,246,0 chr2 137620818 . A G 790.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.783;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=5.994;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.12;ReadPosRankSum=-0.902;SOR=0.125 GT:AD:DP:GQ:PL 0/1:28,28:56:99:819,0,967 chr2 137663426 . A G 1141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.254;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=7.508;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.10;ReadPosRankSum=0.325;SOR=1.487 GT:AD:DP:GQ:PL 0/1:39,42:81:99:1170,0,975 chr2 137939513 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 137951503 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 137951507 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 137970037 . G A 540.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=30.04;ReadPosRankSum=0.488;SOR=2.833 GT:AD:DP:GQ:PL 0/1:3,15:18:71:569,0,71 chr2 138307433 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 138496115 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 138536344 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 138536346 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 138651708 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 138654186 . G T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 138671498 . G A 9313.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.339;ClippingRankSum=0.000;DP=288;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.34;ReadPosRankSum=-0.744;SOR=1.203 GT:AD:DP:GQ:PL 1/1:2,286:288:99:9342,814,0 chr2 138671716 . C T 1296.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.825;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.26;ReadPosRankSum=-1.152;SOR=0.703 GT:AD:DP:GQ:PL 0/1:30,41:71:99:1325,0,859 chr2 138690053 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 138705125 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 138705137 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 138772247 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 138901383 . A C 286.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.68;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:30:315,30,0 chr2 138901704 . C T 378.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.14;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:39:407,39,0 chr2 139054841 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 139227772 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 139253336 . G T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 139385390 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 139469416 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 139669111 . C G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.46;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 139669250 . T C 461.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.78;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:45:490,45,0 chr2 139862037 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 139870328 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 139870344 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 139907027 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 139923600 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 139923601 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 139971275 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 139980195 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 139992062 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 140234768 . C A 840.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.067;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.55;ReadPosRankSum=-0.365;SOR=0.807 GT:AD:DP:GQ:PL 0/1:31,36:67:99:869,0,1172 chr2 140234771 . A T 682.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.328;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.944;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.04;ReadPosRankSum=1.104;SOR=0.555 GT:AD:DP:GQ:PL 0/1:37,31:68:99:711,0,1452 chr2 140239628 . T G 146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=-0.516;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:175,0,212 chr2 140246944 . C T 639.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.95;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:668,48,0 chr2 140246960 . A G 932.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.29;SOR=6.358 GT:AD:DP:GQ:PL 1/1:0,23:23:69:961,69,0 chr2 140270357 . A G 989.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.353;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.00;ReadPosRankSum=0.452;SOR=0.708 GT:AD:DP:GQ:PL 0/1:27,39:66:99:1018,0,721 chr2 140274519 . C T 2426.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.59;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2455,246,0 chr2 140274651 . C T 459.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.213;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.10;ReadPosRankSum=-1.442;SOR=0.735 GT:AD:DP:GQ:PL 0/1:21,17:38:99:488,0,638 chr2 140325590 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 140350962 . G A 1098.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.998;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=8.349;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.70;ReadPosRankSum=-1.207;SOR=0.486 GT:AD:DP:GQ:PL 0/1:29,41:70:99:1127,0,797 chr2 140352871 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.674;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 140353108 . C A 170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.067;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.734;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.83;ReadPosRankSum=-1.215;SOR=0.307 GT:AD:DP:GQ:PL 0/1:16,9:25:99:199,0,411 chr2 140372979 . T C 644.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.017;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=3.647;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.53;ReadPosRankSum=-1.656;SOR=0.235 GT:AD:DP:GQ:PL 0/1:16,23:39:99:673,0,517 chr2 140373126 . C T 857.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.012;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.44;ReadPosRankSum=-1.172;SOR=0.742 GT:AD:DP:GQ:PL 0/1:41,34:75:99:886,0,1032 chr2 140402088 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 140444194 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.64;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 140510175 . T C 1450.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.10;SOR=3.855 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1479,111,0 chr2 140514488 . T A 346.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.57;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:375,27,0 chr2 140516726 . C T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.91;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 140517007 . T C 1764.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.68;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1793,162,0 chr2 140526034 . T G 1289.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.86;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1318,102,0 chr2 140526472 . A G 779.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.52;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,21:21:63:808,63,0 chr2 140532710 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 140533929 . A C 348.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.888;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.80;ReadPosRankSum=-0.830;SOR=0.610 GT:AD:DP:GQ:PL 0/1:5,11:16:99:377,0,161 chr2 140534272 . T A 297.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.74;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:326,24,0 chr2 140534309 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 140536481 . A G 598.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.069;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=4.496;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.76;ReadPosRankSum=0.177;SOR=0.165 GT:AD:DP:GQ:PL 0/1:17,21:38:99:627,0,533 chr2 140538569 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 140540898 . A C 133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.976;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.43;ReadPosRankSum=1.837;SOR=0.052 GT:AD:DP:GQ:PL 0/1:12,6:18:99:162,0,447 chr2 140541105 . T C 592.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.266;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=1.316;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.82;ReadPosRankSum=0.411;SOR=0.392 GT:AD:DP:GQ:PL 0/1:17,23:40:99:621,0,420 chr2 140541113 . G C 1346.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.09;SOR=1.547 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1375,108,0 chr2 140541180 . G C 313.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.099;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.41;ReadPosRankSum=-0.474;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,10:14:99:342,0,113 chr2 140541748 . A G 1525.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.91;SOR=1.880 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1554,135,0 chr2 140542161 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 140574952 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 140574953 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 140586631 . T C 3979.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.89;SOR=1.188 GT:AD:DP:GQ:PL 1/1:0,121:121:99:4008,363,0 chr2 140627389 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 140679736 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 140683503 . C T 328.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.89;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:33:357,33,0 chr2 140683556 . T A 245.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.31;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:27:274,27,0 chr2 140683729 . G A 378.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.14;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,13:13:39:407,39,0 chr2 140683813 . A G 419.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.98;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,14:14:42:448,42,0 chr2 140702748 . T A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 140715936 . A T 898.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.99;SOR=1.942 GT:AD:DP:GQ:PL 1/1:0,29:29:87:927,87,0 chr2 140716182 . A G 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=-0.366;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr2 140716217 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 140716887 . C T 467.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.07;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:496,36,0 chr2 140769444 . A G 1766.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.514;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.01;ReadPosRankSum=-0.657;SOR=1.863 GT:AD:DP:GQ:PL 1/1:1,49:50:99:1795,109,0 chr2 140769621 . A T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 140771023 . T C 2749.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.35;SOR=1.872 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2778,254,0 chr2 140776093 . T C 1402.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.88;SOR=1.662 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1431,132,0 chr2 140813760 . T C 2092.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.24;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2121,200,0 chr2 140813871 . C G 736.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.12;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,20:20:60:765,60,0 chr2 140813911 . A G 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.72;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr2 140867926 . G T 272.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.80;ReadPosRankSum=-1.248;SOR=1.230 GT:AD:DP:GQ:PL 0/1:3,8:11:92:301,0,92 chr2 140898864 . A G 235.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.47;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:264,24,0 chr2 140950125 . C T 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=38.01;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 140951850 . T G 2663.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.64;SOR=0.852 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2692,278,0 chr2 140989680 . A T 1331.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.174;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=2.241;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.44;ReadPosRankSum=-0.792;SOR=1.022 GT:AD:DP:GQ:PL 0/1:38,43:81:99:1360,0,1101 chr2 140989724 . T C 753.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.421;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.530;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.70;ReadPosRankSum=0.487;SOR=1.179 GT:AD:DP:GQ:PL 0/1:25,23:48:99:782,0,739 chr2 140994023 . G A 297.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.925;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=1.527;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.03;ReadPosRankSum=1.591;SOR=1.179 GT:AD:DP:GQ:PL 0/1:14,13:27:99:326,0,401 chr2 141005518 . G A 541.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.379;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=2.469;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.22;ReadPosRankSum=0.529;SOR=1.074 GT:AD:DP:GQ:PL 0/1:31,22:53:99:570,0,889 chr2 141015828 . C A 343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.460;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=2.853;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.18;ReadPosRankSum=-1.040;SOR=1.387 GT:AD:DP:GQ:PL 0/1:26,16:42:99:372,0,648 chr2 141033125 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 141048841 . A C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.59;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 141054865 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 141059052 . A G 211.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.53;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:27:240,27,0 chr2 141059162 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.967;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 141188283 . C T 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.253;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr2 141188380 . C T 1082.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.93;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,31:31:92:1111,92,0 chr2 141254458 . G T 259.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=4.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.29;ReadPosRankSum=0.299;SOR=0.174 GT:AD:DP:GQ:PL 0/1:12,11:23:99:288,0,364 chr2 141312234 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 141312244 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 141467128 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 141476852 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 141476862 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 141480299 . G A 457.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.174;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=0.640;SOR=0.693 GT:AD:DP:GQ:PL 0/1:22,16:38:99:486,0,700 chr2 141699090 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 141810047 . A T 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr2 141810169 . G T 382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.494;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=2.393;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.35;ReadPosRankSum=-1.191;SOR=0.231 GT:AD:DP:GQ:PL 0/1:17,14:31:99:411,0,672 chr2 142127342 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 142130538 . G T 615.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.197;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=2.508;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.07;ReadPosRankSum=-1.704;SOR=0.180 GT:AD:DP:GQ:PL 0/1:30,21:51:99:644,0,1033 chr2 142130807 . G C 5574.77 PASS AC=2;AF=1.00;AN=2;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.63;SOR=2.230 GT:AD:DP:GQ:PL 1/1:0,161:161:99:5603,484,0 chr2 142155080 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 142260687 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 142872232 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 142872239 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 142899594 . A G 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr2 142927553 . T C 578.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.405;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=7.804;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.78;ReadPosRankSum=-0.781;SOR=2.115 GT:AD:DP:GQ:PL 0/1:22,20:42:99:607,0,527 chr2 142936109 . T C 51.28 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 142947132 . A C 1011.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.411;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=1.675;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.00;ReadPosRankSum=-1.393;SOR=0.892 GT:AD:DP:GQ:PL 0/1:48,44:92:99:1040,0,1194 chr2 142956131 . T A 628.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.09;SOR=2.419 GT:AD:DP:GQ:PL 1/1:0,19:19:57:657,57,0 chr2 142988925 . C G 643.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.200;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=1.053;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.50;ReadPosRankSum=0.223;SOR=0.944 GT:AD:DP:GQ:PL 0/1:31,25:56:99:672,0,888 chr2 143029592 . C A 318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.448;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.31;ReadPosRankSum=1.256;SOR=0.770 GT:AD:DP:GQ:PL 0/1:40,20:60:99:347,0,1023 chr2 143029705 . C T 2393.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.19;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2422,246,0 chr2 143033445 . G T 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.318;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.05;ReadPosRankSum=1.435;SOR=0.735 GT:AD:DP:GQ:PL 0/1:11,6:17:99:131,0,272 chr2 143036245 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 143040620 . A G 854.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.818;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.71;ReadPosRankSum=-1.148;SOR=0.669 GT:AD:DP:GQ:PL 0/1:52,36:88:99:883,0,1359 chr2 143131735 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 143155435 . T G 962.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.24;SOR=3.180 GT:AD:DP:GQ:PL 1/1:0,27:27:81:991,81,0 chr2 143216291 . G A 290.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.30;ReadPosRankSum=-0.660;SOR=1.609 GT:AD:DP:GQ:PL 0/1:10,9:19:99:319,0,361 chr2 143382155 . T G 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr2 143435724 . C T 323.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.248;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=1.657;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.99;ReadPosRankSum=-2.111;SOR=1.402 GT:AD:DP:GQ:PL 0/1:15,12:27:99:352,0,397 chr2 143556678 . T G 259.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.07;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:288,21,0 chr2 143606333 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 143625614 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 143792111 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 143792116 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 143813501 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 143918427 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 143936409 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 143937499 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 143952728 . A G 489.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.696;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=5.798;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.84;ReadPosRankSum=0.825;SOR=0.075 GT:AD:DP:GQ:PL 0/1:9,17:26:99:518,0,284 chr2 144007100 . A G 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=-0.887;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr2 144141992 . C A 3204.77 PASS AC=2;AF=1.00;AN=2;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.73;SOR=1.431 GT:AD:DP:GQ:PL 1/1:0,101:101:99:3233,303,0 chr2 144398164 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.31;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 144497643 . T C 1438.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.019;ClippingRankSum=0.000;DP=130;ExcessHet=3.0103;FS=4.488;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.07;ReadPosRankSum=0.683;SOR=1.132 GT:AD:DP:GQ:PL 0/1:74,56:130:99:1467,0,2072 chr2 144708009 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 144847600 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 145490679 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 145490681 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 145644565 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 145826241 . A C 59.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.54;ReadPosRankSum=0.566;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:29:88,0,29 chr2 145826744 . G A 313.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:27:342,27,0 chr2 145827359 . G T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 146241884 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 146241887 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 146747334 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 146839405 . A G 1125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.507;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.826;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=-0.575;SOR=0.600 GT:AD:DP:GQ:PL 0/1:46,43:89:99:1154,0,1286 chr2 147136344 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 147297937 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 147594984 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 147605304 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 147733710 . C T 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.52;QD=19.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr2 147757767 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 147785560 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 147899548 . G A 643.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.291;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=2.371;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.62;ReadPosRankSum=-1.483;SOR=0.839 GT:AD:DP:GQ:PL 0/1:26,25:51:99:672,0,694 chr2 147900020 . A G 640.03 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.38;ReadPosRankSum=-0.297;SOR=4.407 GT:AD:DP:GQ:PL 1/1:1,17:18:12:668,12,0 chr2 147917228 . G C 515.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.261;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.44;ReadPosRankSum=0.564;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,16:22:99:544,0,184 chr2 147922858 . G C 515.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.519;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.19;ReadPosRankSum=-2.607;SOR=0.250 GT:AD:DP:GQ:PL 0/1:14,16:30:99:544,0,483 chr2 147926350 . A T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 147958530 . G T 57.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.55;ReadPosRankSum=0.000;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:86,0,68 chr2 147958859 . T C 589.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.087;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=2.885;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.04;ReadPosRankSum=0.710;SOR=0.307 GT:AD:DP:GQ:PL 0/1:19,23:42:99:618,0,497 chr2 147973683 . T C 402.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.48;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:431,30,0 chr2 148015826 . T C 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.97;ReadPosRankSum=-0.967;SOR=1.802 GT:AD:DP:GQ:PL 0/1:5,2:7:63:63,0,120 chr2 148287798 . A C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 148315865 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.81;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr2 148315874 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 148485691 . G A 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.04;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr2 148513141 . A G 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr2 148566913 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 148691616 . G A 3771.77 PASS AC=2;AF=1.00;AN=2;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.38;SOR=1.336 GT:AD:DP:GQ:PL 1/1:0,113:113:99:3800,339,0 chr2 148753866 . G A 360.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.724;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.04;ReadPosRankSum=-0.476;SOR=1.127 GT:AD:DP:GQ:PL 0/1:8,12:20:99:389,0,274 chr2 148762645 . C A 897.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.87;SOR=4.892 GT:AD:DP:GQ:PL 1/1:0,23:23:69:926,69,0 chr2 148771514 . T C 440.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.14;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:469,36,0 chr2 148781491 . T G 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.15;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr2 148855133 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 148855134 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 148877786 . T C 165.81 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.69;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:20:194,20,0 chr2 148922389 . A T 847.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.41;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:876,63,0 chr2 148997446 . A G 1342.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.119;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.99;ReadPosRankSum=1.726;SOR=0.675 GT:AD:DP:GQ:PL 0/1:62,50:112:99:1371,0,1775 chr2 149001085 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 149011922 . C T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=3.802;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.56;ReadPosRankSum=0.259;SOR=0.093 GT:AD:DP:GQ:PL 0/1:7,5:12:99:107,0,257 chr2 149147803 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 149147804 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 149160295 . T C 244.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.551;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=0.297;SOR=0.593 GT:AD:DP:GQ:PL 0/1:10,9:19:99:273,0,290 chr2 149187269 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 149193560 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 149212983 . C G 1659.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.848;ClippingRankSum=0.000;DP=172;ExcessHet=3.0103;FS=2.947;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.71;ReadPosRankSum=-1.240;SOR=0.968 GT:AD:DP:GQ:PL 0/1:104,67:171:99:1688,0,3055 chr2 149310881 . T C 427.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.52;SOR=1.112 GT:AD:DP:GQ:PL 1/1:0,15:15:45:456,45,0 chr2 149320628 . G A 494.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.04;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:57:523,57,0 chr2 149320836 . G A 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.682;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=2.533;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.40;ReadPosRankSum=-0.812;SOR=0.707 GT:AD:DP:GQ:PL 0/1:7,5:12:99:105,0,188 chr2 149321364 . T C 837.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.43;QD=29.92;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,28:28:84:866,84,0 chr2 149321440 . A G 199.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.182;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.32;ReadPosRankSum=1.768;SOR=0.892 GT:AD:DP:GQ:PL 0/1:16,8:24:99:228,0,460 chr2 149330623 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 149362708 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 149449189 . G A 3853.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.097;ClippingRankSum=0.000;DP=292;ExcessHet=3.0103;FS=1.405;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.20;ReadPosRankSum=0.215;SOR=0.601 GT:AD:DP:GQ:PL 0/1:142,150:292:99:3882,0,3806 chr2 149468327 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 149487994 . G A 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 149512074 . A C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 149512197 . C T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 149569885 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 149572335 . C A 377.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.06;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,10:10:29:406,29,0 chr2 149572559 . C T 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr2 149575955 . G T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 149576462 . C T 619.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.275;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=2.218;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.16;ReadPosRankSum=-1.166;SOR=0.401 GT:AD:DP:GQ:PL 0/1:35,26:61:99:648,0,899 chr2 149576614 . C G 544.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.282;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=1.155;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.12;ReadPosRankSum=-1.085;SOR=0.434 GT:AD:DP:GQ:PL 0/1:27,22:49:99:573,0,744 chr2 149581940 . C T 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-1.111;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr2 149587175 . C G 1470.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.762;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=22.814;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.16;ReadPosRankSum=-0.701;SOR=1.888 GT:AD:DP:GQ:PL 0/1:41,50:91:99:1499,0,1133 chr2 149601811 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 150080881 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 150205645 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 150205670 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 150379731 . C G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 150470348 . T C 160.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.80;ReadPosRankSum=-0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:189,0,24 chr2 150487160 . C T 244.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.673;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.44;ReadPosRankSum=-0.055;SOR=0.293 GT:AD:DP:GQ:PL 0/1:15,14:29:99:282,0,221 chr2 150487161 . T C 219.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.650;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=3.163;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.58;ReadPosRankSum=-0.046;SOR=0.175 GT:AD:DP:GQ:PL 0/1:15,14:29:99:248,0,294 chr2 150487474 . A T 709 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.32;SOR=1.863 GT:AD:DP:GQ:PL 1/1:1,18:19:12:746,12,0 chr2 150595528 . A T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 150623432 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 150868981 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 150868984 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 150960646 . G A 344.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.52;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,13:13:39:373,39,0 chr2 150960665 . A C 691.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.62;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:48:720,48,0 chr2 150960675 . A T 691.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.25;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:48:720,48,0 chr2 150960693 . T C 503.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.49;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,16:16:48:532,48,0 chr2 150970343 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 150977820 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 150977841 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 150977842 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 151043709 . T C 2867.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.84;SOR=0.901 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2896,278,0 chr2 151047469 . A C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 151245286 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 151251747 . T G 239.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.678;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=1.801;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.42;ReadPosRankSum=1.050;SOR=0.283 GT:AD:DP:GQ:PL 0/1:9,12:21:99:268,0,233 chr2 151252645 . C T 1250.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.31;SOR=3.321 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1279,105,0 chr2 151255451 . G A 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.253;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr2 151261266 . T C 2207.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.490;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.62;ReadPosRankSum=1.488;SOR=0.738 GT:AD:DP:GQ:PL 0/1:70,81:151:99:2236,0,1716 chr2 151261757 . G A 5193.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.143;ClippingRankSum=0.000;DP=318;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.38;ReadPosRankSum=0.475;SOR=0.673 GT:AD:DP:GQ:PL 0/1:182,135:317:99:5222,0,7335 chr2 151261761 . A G 5152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.001;ClippingRankSum=0.000;DP=324;ExcessHet=3.0103;FS=0.410;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.95;ReadPosRankSum=0.267;SOR=0.648 GT:AD:DP:GQ:PL 0/1:185,138:323:99:5181,0,7360 chr2 151268226 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 151270497 . A G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 151271388 . T C 171.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.615;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.21;ReadPosRankSum=1.969;SOR=0.569 GT:AD:DP:GQ:PL 0/1:7,6:13:99:200,0,209 chr2 151275616 . A G 1030.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.169;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.706;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.81;ReadPosRankSum=-1.767;SOR=0.777 GT:AD:DP:GQ:PL 0/1:74,43:117:99:1059,0,2075 chr2 151278821 . G A 1077.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.035;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.31;ReadPosRankSum=-1.943;SOR=0.612 GT:AD:DP:GQ:PL 0/1:37,44:81:99:1106,0,964 chr2 151279000 . A G 855.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.454;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=1.013;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.97;ReadPosRankSum=0.027;SOR=0.527 GT:AD:DP:GQ:PL 0/1:32,34:66:99:884,0,844 chr2 151282008 . T C 1008.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.57;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1037,99,0 chr2 151282508 . T C 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr2 151282757 . C T 1233.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.84;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1262,120,0 chr2 151282902 . G A 320.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.684;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=3.166;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.72;ReadPosRankSum=1.272;SOR=1.282 GT:AD:DP:GQ:PL 0/1:19,14:33:99:349,0,546 chr2 151282979 . A G 622.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.14;SOR=1.721 GT:AD:DP:GQ:PL 1/1:0,20:20:60:651,60,0 chr2 151308556 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 151309407 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 151312602 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 151335072 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 151409797 . T C 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.74;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr2 151409959 . T C 4635.77 PASS AC=2;AF=1.00;AN=2;DP=139;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.35;SOR=1.714 GT:AD:DP:GQ:PL 1/1:0,139:139:99:4664,417,0 chr2 151410217 . T A 1461.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.22;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1490,114,0 chr2 151410558 . T G 5947.77 PASS AC=2;AF=1.00;AN=2;DP=178;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.41;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,178:178:99:5976,535,0 chr2 151411158 . G A 273.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.22;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:302,24,0 chr2 151420635 . A G 134.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:162,12,0 chr2 151433253 . G A 1079.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.74;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1108,96,0 chr2 151437106 . C T 848.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.13;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,21:21:63:877,63,0 chr2 151446657 . G A 1557.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.36;SOR=3.716 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1586,126,0 chr2 151449521 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 151455056 . G A 2393.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.79;SOR=1.340 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2422,218,0 chr2 151458980 . G A 1925.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.811;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.854;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.32;ReadPosRankSum=1.021;SOR=0.561 GT:AD:DP:GQ:PL 0/1:51,67:118:99:1954,0,1468 chr2 151459035 . G T 1858.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.04;SOR=6.316 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1887,141,0 chr2 151461017 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 151463604 . G A 2445.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.05;SOR=0.864 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2474,221,0 chr2 151465581 . A T 2446.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.19;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2475,228,0 chr2 151468275 . G C 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr2 151474904 . C G 1119.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.10;SOR=1.949 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1148,108,0 chr2 151490465 . T C 5084.77 PASS AC=2;AF=1.00;AN=2;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.80;SOR=1.100 GT:AD:DP:GQ:PL 1/1:0,155:155:99:5113,465,0 chr2 151492328 . T A 4225.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.81;SOR=0.810 GT:AD:DP:GQ:PL 1/1:0,125:125:99:4254,375,0 chr2 151492512 . G A 1742.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.51;SOR=2.215 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1771,155,0 chr2 151493948 . T C 1210.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.72;SOR=1.432 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1239,111,0 chr2 151496329 . C G 2479.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.79;SOR=0.855 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2508,234,0 chr2 151496881 . T G 730.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.80;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,21:21:63:759,63,0 chr2 151500870 . G A 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr2 151512603 . T C 1801.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.02;SOR=4.003 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1830,144,0 chr2 151518286 . G A 3545.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.31;SOR=1.530 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3574,351,0 chr2 151525381 . G A 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.79;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 151525685 . A G 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr2 151525815 . G A 1166.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.45;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1195,90,0 chr2 151525940 . C G 7326.77 PASS AC=2;AF=1.00;AN=2;DP=214;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.40;SOR=1.920 GT:AD:DP:GQ:PL 1/1:0,213:213:99:7355,640,0 chr2 151527399 . T C 1831.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.56;SOR=1.938 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1860,159,0 chr2 151531039 . T C 4736.77 PASS AC=2;AF=1.00;AN=2;DP=148;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.01;SOR=1.470 GT:AD:DP:GQ:PL 1/1:0,148:148:99:4765,444,0 chr2 151531248 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.31;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 151531714 . G C 2050.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.62;SOR=2.265 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2079,183,0 chr2 151538020 . T G 3069.77 PASS AC=2;AF=1.00;AN=2;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=1.749 GT:AD:DP:GQ:PL 1/1:0,87:87:99:3098,261,0 chr2 151545657 . C A 947.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.28;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,25:25:75:976,75,0 chr2 151546197 . A G 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.81;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 151546500 . C T 2688.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.47;SOR=2.425 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2717,234,0 chr2 151547780 . C T 2099.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.30;SOR=2.507 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2128,177,0 chr2 151552902 . C T 3440.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.77;SOR=1.947 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3469,315,0 chr2 151553295 . C A 1466.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.55;SOR=5.031 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1495,114,0 chr2 151554218 . A G 1060.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.36;SOR=5.211 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1089,81,0 chr2 151564843 . G A 179.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.69;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:208,15,0 chr2 151565423 . A G 1386.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.921;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=2.119;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.01;ReadPosRankSum=0.252;SOR=0.479 GT:AD:DP:GQ:PL 0/1:27,50:77:99:1415,0,699 chr2 151565562 . C G 5529.77 PASS AC=2;AF=1.00;AN=2;DP=167;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.11;SOR=0.944 GT:AD:DP:GQ:PL 1/1:0,167:167:99:5558,501,0 chr2 151565573 . A G 2276.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.299;ClippingRankSum=0.000;DP=171;ExcessHet=3.0103;FS=7.750;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.31;ReadPosRankSum=0.447;SOR=1.138 GT:AD:DP:GQ:PL 0/1:86,85:171:99:2305,0,2193 chr2 151569178 . T C 825.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.422;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.76;ReadPosRankSum=-1.447;SOR=0.776 GT:AD:DP:GQ:PL 0/1:29,31:60:99:854,0,827 chr2 151570735 . A G 1885.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.93;SOR=1.685 GT:AD:DP:GQ:PL 1/1:0,63:63:99:1914,188,0 chr2 151575967 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.65;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 151592126 . T C 7572.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=8.948;ClippingRankSum=0.000;DP=820;ExcessHet=3.0103;FS=29.992;MLEAC=1;MLEAF=0.500;MQ=50.81;MQRankSum=-21.446;QD=9.24;ReadPosRankSum=-3.040;SOR=2.320 GT:AD:DP:GQ:PL 0/1:533,287:820:99:7601,0,14419 chr2 151610214 . T C 523.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.027;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.767;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.96;ReadPosRankSum=-2.031;SOR=0.343 GT:AD:DP:GQ:PL 0/1:16,19:35:99:552,0,495 chr2 151617487 . A G 95.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.685;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.35;ReadPosRankSum=-0.617;SOR=1.371 GT:AD:DP:GQ:PL 0/1:14,8:22:99:133,0,313 chr2 151619424 . T G 502.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.40;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:531,39,0 chr2 151619514 . C G 659.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.134;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.45;ReadPosRankSum=-0.482;SOR=0.804 GT:AD:DP:GQ:PL 0/1:27,26:53:99:688,0,730 chr2 151625463 . A G 598.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.50;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:627,51,0 chr2 151631060 . T C 1111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.107;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=0.842;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.22;ReadPosRankSum=-0.085;SOR=0.861 GT:AD:DP:GQ:PL 0/1:49,42:91:99:1140,0,1465 chr2 151633705 . A G 9274.77 PASS AC=2;AF=1.00;AN=2;DP=296;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.55;SOR=0.950 GT:AD:DP:GQ:PL 1/1:0,294:294:99:9303,882,0 chr2 151633944 . A G 3290.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.26;SOR=1.103 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3319,306,0 chr2 151643935 . C G 2227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.054;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.84;MQRankSum=0.981;QD=14.37;ReadPosRankSum=0.254;SOR=0.744 GT:AD:DP:GQ:PL 0/1:80,75:155:99:2256,0,2193 chr2 151671058 . C T 2524.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.66;SOR=1.240 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2553,225,0 chr2 151674563 . A G 4122.77 PASS AC=2;AF=1.00;AN=2;DP=134;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.23;SOR=0.787 GT:AD:DP:GQ:PL 1/1:0,132:132:99:4151,396,0 chr2 151679984 . T A 5375.77 PASS AC=2;AF=1.00;AN=2;DP=167;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.19;SOR=1.499 GT:AD:DP:GQ:PL 1/1:0,167:167:99:5404,501,0 chr2 151682963 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 151684620 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 151695548 . A C 3317.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.53;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3346,306,0 chr2 151709919 . A G 1961.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.29;SOR=2.522 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1990,165,0 chr2 151717467 . A G 5199.77 PASS AC=2;AF=1.00;AN=2;DP=165;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.51;SOR=0.834 GT:AD:DP:GQ:PL 1/1:0,165:165:99:5228,495,0 chr2 151717770 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 151725352 . T C 1622.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.81;SOR=2.400 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1651,144,0 chr2 151727639 . A C 4009.77 PASS AC=2;AF=1.00;AN=2;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.70;SOR=2.021 GT:AD:DP:GQ:PL 1/1:0,119:119:99:4038,357,0 chr2 151783775 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 151872624 . T C 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.96;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr2 151882992 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 151913417 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 151913440 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 151918874 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 151990317 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 152098122 . G C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.91;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 152098968 . G C 274.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.937;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.16;ReadPosRankSum=0.197;SOR=0.495 GT:AD:DP:GQ:PL 0/1:7,10:17:99:303,0,173 chr2 152103033 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 152135723 . G A 755.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.52;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,20:20:60:784,60,0 chr2 152143823 . T A 654.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.27;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,18:18:54:683,54,0 chr2 152146898 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 152148453 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=38.04;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 152149938 . G C 1529.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.58;SOR=5.943 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1558,117,0 chr2 152159999 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 152160936 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.01;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 152176079 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 152178333 . A T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 152187381 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 152233107 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 152262896 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 152262962 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 152273632 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 152274457 . T C 93.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0 chr2 152311059 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 152335352 . A G 681.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.44;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:710,51,0 chr2 152349220 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 152389530 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 152389701 . C T 482.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.233;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=1.264;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.07;ReadPosRankSum=0.206;SOR=0.385 GT:AD:DP:GQ:PL 0/1:20,20:40:99:511,0,579 chr2 152390687 . C T 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:69,0,33 chr2 152521945 . T C 2049.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.71;SOR=0.722 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2078,206,0 chr2 152522060 . A G 1341.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.40;SOR=2.362 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1370,117,0 chr2 152522138 . G A 475.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.06;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:504,39,0 chr2 152549080 . G A 1392.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.39;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1421,129,0 chr2 152549170 . A G 760.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.08;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,23:23:69:789,69,0 chr2 152558656 . A C 689.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.05;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,18:18:54:718,54,0 chr2 152558730 . T C 1805.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=0.551;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.61;ReadPosRankSum=0.314;SOR=1.300 GT:AD:DP:GQ:PL 1/1:2,57:59:99:1834,124,0 chr2 152558862 . T G 6384.77 PASS AC=2;AF=1.00;AN=2;DP=207;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.84;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,207:207:99:6413,621,0 chr2 152559074 . T C 845.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.53;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:874,63,0 chr2 152560811 . A G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.07;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 152578774 . G A 263.80 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.54;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 152611348 . C A 327.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.78;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:356,30,0 chr2 152611593 . C T 662.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.854;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=11.443;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.04;ReadPosRankSum=0.915;SOR=0.277 GT:AD:DP:GQ:PL 0/1:39,27:66:99:691,0,1157 chr2 152616921 . G A 312.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.364;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.17;ReadPosRankSum=-0.219;SOR=0.724 GT:AD:DP:GQ:PL 0/1:17,11:28:99:341,0,554 chr2 152616978 . G A 694.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.077;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=2.447;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.07;ReadPosRankSum=-0.300;SOR=1.207 GT:AD:DP:GQ:PL 0/1:44,25:69:99:723,0,1224 chr2 152617007 . A C 860.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.459;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=3.209;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.25;ReadPosRankSum=-0.754;SOR=1.193 GT:AD:DP:GQ:PL 0/1:51,33:84:99:889,0,1369 chr2 152617280 . T G 803.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.737;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.79;ReadPosRankSum=-0.360;SOR=1.121 GT:AD:DP:GQ:PL 0/1:7,23:30:99:832,0,196 chr2 152622417 . T C 723.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.64;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:752,54,0 chr2 152625429 . T C 2296.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.29;SOR=1.785 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2325,207,0 chr2 152626743 . T C 319.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.843;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.83;ReadPosRankSum=-0.425;SOR=0.793 GT:AD:DP:GQ:PL 0/1:9,10:19:99:348,0,318 chr2 152628171 . G A 357.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.255;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.26;ReadPosRankSum=-0.880;SOR=0.260 GT:AD:DP:GQ:PL 0/1:10,12:22:99:386,0,352 chr2 152636396 . G T 1631.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.021;ClippingRankSum=0.000;DP=157;ExcessHet=3.0103;FS=2.993;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.39;ReadPosRankSum=0.617;SOR=0.478 GT:AD:DP:GQ:PL 0/1:89,68:157:99:1660,0,2414 chr2 152638720 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 152640654 . C T 701.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.24;SOR=1.519 GT:AD:DP:GQ:PL 1/1:0,24:24:72:730,72,0 chr2 152646642 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 152658069 . G C 451.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.507;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=1.264;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.58;ReadPosRankSum=0.609;SOR=1.002 GT:AD:DP:GQ:PL 0/1:19,20:39:99:480,0,423 chr2 152658175 . C T 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=1.221;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,167 chr2 152663010 . A G 441.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.241;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.81;ReadPosRankSum=-1.586;SOR=0.693 GT:AD:DP:GQ:PL 0/1:16,16:32:99:470,0,458 chr2 152663254 . C T 51.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.222;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.45;ReadPosRankSum=0.081;SOR=0.784 GT:AD:DP:GQ:PL 0/1:12,3:15:80:80,0,387 chr2 152664268 . A G 428.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.013;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=6.455;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.31;ReadPosRankSum=-0.995;SOR=2.973 GT:AD:DP:GQ:PL 0/1:15,13:28:99:457,0,474 chr2 152664305 . C A 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.070;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.11;ReadPosRankSum=0.054;SOR=2.765 GT:AD:DP:GQ:PL 0/1:8,8:16:99:286,0,218 chr2 152670503 . C T 185.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.48;ReadPosRankSum=-0.998;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:214,0,214 chr2 152672847 . T C 308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.75;ReadPosRankSum=1.769;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,9:13:99:337,0,128 chr2 152676746 . G A 615.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.437;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=5.608;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=-2.053;SOR=0.970 GT:AD:DP:GQ:PL 0/1:29,25:54:99:644,0,799 chr2 152679156 . C T 1023.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1052,96,0 chr2 152693300 . G C 440.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.169;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.03;ReadPosRankSum=1.471;SOR=0.560 GT:AD:DP:GQ:PL 0/1:6,16:22:99:469,0,136 chr2 152707344 . G A 228.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.367;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.25;ReadPosRankSum=-0.459;SOR=0.418 GT:AD:DP:GQ:PL 0/1:6,9:15:99:257,0,171 chr2 152715924 . C T 771.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.08;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,22:22:66:800,66,0 chr2 152716894 . C G 70.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.424;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.05;ReadPosRankSum=0.573;SOR=0.804 GT:AD:DP:GQ:PL 0/1:9,5:14:99:99,0,232 chr2 152717014 . C T 300.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.513;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.57;ReadPosRankSum=-1.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:13,13:26:99:329,0,397 chr2 152717578 . G C 352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.132;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=3.222;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.03;ReadPosRankSum=1.029;SOR=2.636 GT:AD:DP:GQ:PL 0/1:11,11:22:99:381,0,376 chr2 152719765 . A C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.47;ReadPosRankSum=-1.100;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:72:72,0,110 chr2 152720499 . G A 977.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.973;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=3.005;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.38;ReadPosRankSum=-0.485;SOR=0.586 GT:AD:DP:GQ:PL 0/1:37,42:79:99:1006,0,990 chr2 152729808 . T C 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr2 152729813 . G A 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr2 152850764 . T C 233.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.22;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:24:262,24,0 chr2 152851701 . C G 321.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.18;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:30:350,30,0 chr2 152860569 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 152861894 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 152895749 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 153410347 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 153420879 . C T 170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.815;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=1.987;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.67;ReadPosRankSum=0.641;SOR=0.307 GT:AD:DP:GQ:PL 0/1:6,10:16:99:199,0,168 chr2 153461488 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 153797672 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 153854495 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 153854512 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 153873272 . A C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 154064975 . T C 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr2 154140163 . G C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr2 154241877 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 154286725 . A C 170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.862;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=9.574;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.05;ReadPosRankSum=1.688;SOR=0.019 GT:AD:DP:GQ:PL 0/1:11,6:17:99:199,0,396 chr2 154286961 . C T 332.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.718;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.47;ReadPosRankSum=0.635;SOR=0.582 GT:AD:DP:GQ:PL 0/1:15,14:29:99:361,0,425 chr2 154338580 . C G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 154338710 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 154409111 . G A 722.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.459;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=1.339;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.71;ReadPosRankSum=-0.367;SOR=0.394 GT:AD:DP:GQ:PL 0/1:19,27:46:99:751,0,507 chr2 154438868 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.66;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 154446337 . T A 57.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:85,9,0 chr2 154450373 . C T 1648.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.34;SOR=4.021 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1677,120,0 chr2 154457092 . G T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 154577719 . T C 553.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.15;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:57:582,57,0 chr2 154709607 . G A 487.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.193;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.32;ReadPosRankSum=-0.182;SOR=1.179 GT:AD:DP:GQ:PL 0/1:8,16:24:99:516,0,224 chr2 154828471 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 154854845 . T C 951.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.058;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=2.953;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.47;ReadPosRankSum=-0.830;SOR=1.121 GT:AD:DP:GQ:PL 0/1:45,38:83:99:980,0,1221 chr2 155213486 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 155263744 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 155329263 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 155584248 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 155592528 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 155592647 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 155654939 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 155776830 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 156013230 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 156326117 . G A 626.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.189;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=4.980;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=-0.944;SOR=0.230 GT:AD:DP:GQ:PL 0/1:31,21:52:99:655,0,1071 chr2 156332499 . G C 2782.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.62;SOR=1.055 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2811,264,0 chr2 156398672 . T C 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr2 156465169 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 156465366 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 156551111 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 156571081 . T C 997.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.41;SOR=2.226 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1026,87,0 chr2 156601429 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 156610528 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 156610594 . T C 403.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.65;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:36:432,36,0 chr2 156730750 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 156875001 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 157132916 . T C 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr2 157292866 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 157292871 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 157299064 . G A 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 157300849 . C T 7711.77 PASS AC=2;AF=1.00;AN=2;DP=253;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.60;SOR=0.810 GT:AD:DP:GQ:PL 1/1:0,252:252:99:7740,752,0 chr2 157305521 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 157305963 . C T 847.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.88;SOR=4.003 GT:AD:DP:GQ:PL 1/1:0,23:23:69:876,69,0 chr2 157306009 . T G 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.81;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr2 157308492 . C T 681.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.13;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:710,51,0 chr2 157308889 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 157427198 . A G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.39;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 157427544 . C T 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.51;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr2 157434676 . A C 732.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.17;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,28:28:84:761,84,0 chr2 157538567 . C G 2260.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.55;SOR=1.547 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2289,222,0 chr2 157542998 . T A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.10;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 157543002 . G T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 157544294 . C A 122.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.51;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:150,12,0 chr2 157544396 . C T 1902.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=3.570 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1931,159,0 chr2 157544625 . T C 2209.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.08;SOR=3.370 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2238,183,0 chr2 157556030 . T C 584.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.063;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=1.950;SOR=0.665 GT:AD:DP:GQ:PL 0/1:25,20:45:99:613,0,739 chr2 157587377 . G A 2480.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.46;SOR=1.675 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2509,216,0 chr2 157628258 . T A 287.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.505;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.99;ReadPosRankSum=0.080;SOR=0.593 GT:AD:DP:GQ:PL 0/1:4,12:16:85:316,0,85 chr2 157770468 . C T 3482.77 PASS AC=2;AF=1.00;AN=2;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.86;SOR=1.300 GT:AD:DP:GQ:PL 1/1:0,106:106:99:3511,316,0 chr2 157778539 . A G 259.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.15;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:288,21,0 chr2 157780398 . G A 6109.77 PASS AC=2;AF=1.00;AN=2;DP=192;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.82;SOR=1.354 GT:AD:DP:GQ:PL 1/1:0,192:192:99:6138,576,0 chr2 157780625 . A G 1274.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.604;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.65;ReadPosRankSum=0.293;SOR=0.690 GT:AD:DP:GQ:PL 0/1:20,67:87:99:1303,0,307 chr2 157780933 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 157884600 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 157884623 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 157910856 . C T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.73;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 157962285 . A G 369.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.81;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,12:12:36:398,36,0 chr2 157994364 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 158012503 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 158117643 . T G 93.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.908;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=4.393;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.52;ReadPosRankSum=0.473;SOR=0.061 GT:AD:DP:GQ:PL 0/1:7,4:11:99:122,0,259 chr2 158121666 . C G 419.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.062;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.14;ReadPosRankSum=0.122;SOR=1.085 GT:AD:DP:GQ:PL 0/1:11,15:26:99:448,0,314 chr2 158172288 . A G 843.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.75;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,25:25:75:872,75,0 chr2 158220507 . A C 325.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.72;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,15:15:43:354,43,0 chr2 158241538 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 158277675 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.39;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 158309557 . T C 2484.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.69;SOR=1.905 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2513,227,0 chr2 158338770 . C T 734.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.111;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=1.018;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=1.289;SOR=0.527 GT:AD:DP:GQ:PL 0/1:31,30:61:99:763,0,788 chr2 158339177 . T C 340.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.30;ReadPosRankSum=-1.914;SOR=1.244 GT:AD:DP:GQ:PL 0/1:6,10:16:99:369,0,202 chr2 158339260 . T C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=1.036;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 158340259 . T C 1163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.683;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.88;ReadPosRankSum=-0.274;SOR=0.745 GT:AD:DP:GQ:PL 0/1:51,47:98:99:1192,0,1463 chr2 158345121 . G A 725.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.862;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=6.239;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.52;ReadPosRankSum=-1.593;SOR=0.214 GT:AD:DP:GQ:PL 0/1:21,29:50:99:754,0,545 chr2 158358389 . T C 763.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.546;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.14;ReadPosRankSum=1.082;SOR=0.678 GT:AD:DP:GQ:PL 0/1:23,31:54:99:792,0,557 chr2 158366049 . T C 146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.839;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=7.425;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.72;ReadPosRankSum=0.520;SOR=0.895 GT:AD:DP:GQ:PL 0/1:11,8:19:99:175,0,300 chr2 158456221 . C T 2224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.625;ClippingRankSum=0.000;DP=172;ExcessHet=3.0103;FS=1.245;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.93;ReadPosRankSum=0.645;SOR=0.560 GT:AD:DP:GQ:PL 0/1:90,82:172:99:2253,0,2458 chr2 158457616 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 158457800 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 158577980 . G A 285.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=28.58;ReadPosRankSum=0.210;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:314,0,337 chr2 158577988 . A G 324.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.20;ReadPosRankSum=-0.553;SOR=1.329 GT:AD:DP:GQ:PL 0/1:5,9:14:99:353,0,334 chr2 158603351 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.189;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr2 158621197 . A G 1588.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.781;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=4.610;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.82;ReadPosRankSum=-0.542;SOR=0.380 GT:AD:DP:GQ:PL 0/1:57,58:115:99:1617,0,1659 chr2 158642428 . A T 362.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.830;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.27;ReadPosRankSum=-0.285;SOR=0.307 GT:AD:DP:GQ:PL 0/1:9,12:21:99:391,0,301 chr2 158663469 . C T 1244.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.108;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.916;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-0.171;SOR=0.860 GT:AD:DP:GQ:PL 0/1:30,44:74:99:1273,0,792 chr2 158663573 . G C 648.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.782;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=2.860;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.74;ReadPosRankSum=0.096;SOR=1.264 GT:AD:DP:GQ:PL 0/1:23,21:44:99:677,0,642 chr2 158666367 . C G 436.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.740;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.85;ReadPosRankSum=0.485;SOR=1.085 GT:AD:DP:GQ:PL 0/1:9,13:22:99:465,0,309 chr2 158674139 . A T 1466.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.450;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=1.033;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.12;ReadPosRankSum=0.384;SOR=0.991 GT:AD:DP:GQ:PL 0/1:43,48:91:99:1495,0,1197 chr2 158678351 . A G 324.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.453;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=3.222;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.47;ReadPosRankSum=2.616;SOR=0.160 GT:AD:DP:GQ:PL 0/1:11,10:21:99:353,0,369 chr2 158678362 . C T 322.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.67;ReadPosRankSum=2.052;SOR=0.138 GT:AD:DP:GQ:PL 0/1:12,10:22:99:351,0,431 chr2 158678377 . C T 402.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.388;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=3.188;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.49;ReadPosRankSum=-2.054;SOR=0.078 GT:AD:DP:GQ:PL 0/1:13,13:26:99:431,0,465 chr2 158692713 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 158692795 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 158692862 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 158701465 . A C 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 158706394 . C A 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr2 158707325 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 158712815 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 158787494 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 158795222 . A G 355.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.519;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.94;ReadPosRankSum=-1.651;SOR=0.307 GT:AD:DP:GQ:PL 0/1:9,12:21:99:384,0,313 chr2 158795461 . G A 2526.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.529;ClippingRankSum=0.000;DP=187;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.51;ReadPosRankSum=-1.032;SOR=0.675 GT:AD:DP:GQ:PL 0/1:95,92:187:99:2555,0,2440 chr2 158795719 . G T 326.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.717;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.22;ReadPosRankSum=1.088;SOR=1.112 GT:AD:DP:GQ:PL 0/1:7,10:17:99:355,0,241 chr2 158804565 . C T 631.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.259;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.79;ReadPosRankSum=2.876;SOR=0.557 GT:AD:DP:GQ:PL 0/1:10,19:29:99:660,0,324 chr2 158807087 . T C 966.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.297;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=5.230;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.18;ReadPosRankSum=0.825;SOR=1.242 GT:AD:DP:GQ:PL 0/1:55,40:95:99:995,0,1351 chr2 158807104 . G A 1325.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.408;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=5.068;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.81;ReadPosRankSum=0.044;SOR=0.647 GT:AD:DP:GQ:PL 0/1:42,54:96:99:1354,0,1090 chr2 158815930 . G A 364.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.849;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=6.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.58;ReadPosRankSum=1.512;SOR=3.383 GT:AD:DP:GQ:PL 0/1:11,11:22:99:393,0,290 chr2 158838237 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 158841209 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 158850604 . C A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:36:81,0,36 chr2 158850613 . T C 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.68;MQRankSum=0.674;QD=12.44;ReadPosRankSum=1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,82 chr2 158850614 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.68;MQRankSum=0.674;QD=12.44;ReadPosRankSum=1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,82 chr2 158850661 . G A 136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.57;MQRankSum=1.282;QD=27.35;ReadPosRankSum=-1.282;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:48:165,0,48 chr2 158850684 . G C 136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.57;MQRankSum=1.282;QD=27.35;ReadPosRankSum=-1.282;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:48:165,0,48 chr2 158850724 . G A 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.68;MQRankSum=1.150;QD=23.69;ReadPosRankSum=0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:71:123,0,71 chr2 158850730 . G T 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.68;MQRankSum=1.150;QD=23.69;ReadPosRankSum=0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:71:123,0,71 chr2 158853677 . T A 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.039;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=1.510;MLEAC=1;MLEAF=0.500;MQ=49.23;MQRankSum=-3.469;QD=9.77;ReadPosRankSum=1.417;SOR=0.648 GT:AD:DP:GQ:PL 0/1:14,13:27:99:292,0,386 chr2 158854142 . C G 494.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.991;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=1.643;MLEAC=1;MLEAF=0.500;MQ=51.15;MQRankSum=-3.498;QD=21.51;ReadPosRankSum=0.110;SOR=1.112 GT:AD:DP:GQ:PL 0/1:8,15:23:99:523,0,265 chr2 158854325 . A G 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.221;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.01;MQRankSum=-1.221;QD=15.08;ReadPosRankSum=1.025;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,145 chr2 158862615 . T C 569.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.225;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.137;MLEAC=1;MLEAF=0.500;MQ=45.17;MQRankSum=-1.489;QD=12.66;ReadPosRankSum=1.481;SOR=0.519 GT:AD:DP:GQ:PL 0/1:25,20:45:99:598,0,704 chr2 158865022 . G A 99.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.25;ReadPosRankSum=-0.180;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:128,0,104 chr2 158865210 . C T 413.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.453;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.70;ReadPosRankSum=-0.199;SOR=0.387 GT:AD:DP:GQ:PL 0/1:4,17:21:99:442,0,104 chr2 158871711 . T C 94.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.80;ReadPosRankSum=-0.210;SOR=0.368 GT:AD:DP:GQ:PL 0/1:1,5:6:24:123,0,24 chr2 158871758 . C T 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=1.465;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:28:120,0,28 chr2 158874655 . A G 87.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.634;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.06;MQRankSum=0.283;QD=4.88;ReadPosRankSum=0.892;SOR=0.619 GT:AD:DP:GQ:PL 0/1:12,6:18:99:116,0,379 chr2 158874954 . A G 966.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.353;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=1.950;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.24;ReadPosRankSum=-1.770;SOR=0.944 GT:AD:DP:GQ:PL 0/1:39,34:73:99:995,0,988 chr2 158875296 . G A 163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=13.222;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.20;ReadPosRankSum=0.967;SOR=2.204 GT:AD:DP:GQ:PL 0/1:3,6:9:98:192,0,98 chr2 158875446 . G T 279.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:308,27,0 chr2 158875595 . T A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 158927839 . T C 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr2 158927873 . G A 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr2 159034862 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 159056191 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 159091227 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 159097663 . C T 1643.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.072;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=6.581;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.18;ReadPosRankSum=-0.669;SOR=1.251 GT:AD:DP:GQ:PL 0/1:68,67:135:99:1672,0,1809 chr2 159098056 . A T 71.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.96;ReadPosRankSum=-1.960;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:100,0,107 chr2 159136061 . C T 369.98 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-1.031;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.46;ReadPosRankSum=-2.100;SOR=0.804 GT:AD:DP:GQ:PL 1/1:2,11:13:13:398,13,0 chr2 159141584 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 159149004 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 159149632 . C T 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=0.703;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr2 159163352 . A G 5351.77 PASS AC=2;AF=1.00;AN=2;DP=165;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=0.889 GT:AD:DP:GQ:PL 1/1:0,165:165:99:5380,495,0 chr2 159169128 . A C 350.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.130;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.46;ReadPosRankSum=0.107;SOR=1.022 GT:AD:DP:GQ:PL 0/1:8,11:19:99:379,0,245 chr2 159176663 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.01;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 159178408 . A G 889.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.52;SOR=6.273 GT:AD:DP:GQ:PL 1/1:0,22:22:66:918,66,0 chr2 159178684 . C T 3813.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.386;ClippingRankSum=0.000;DP=281;ExcessHet=3.0103;FS=3.239;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.62;ReadPosRankSum=-0.351;SOR=0.532 GT:AD:DP:GQ:PL 0/1:134,146:280:99:3842,0,3716 chr2 159178696 . T C 10959.77 PASS AC=2;AF=1.00;AN=2;DP=278;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.47;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,278:278:99:10988,841,0 chr2 159184509 . G A 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 159185687 . G A 1688.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.572;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=2.295;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.76;ReadPosRankSum=-0.045;SOR=1.476 GT:AD:DP:GQ:PL 0/1:41,49:90:99:1717,0,1402 chr2 159185919 . G A 4410.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.474;ClippingRankSum=0.000;DP=352;ExcessHet=3.0103;FS=4.237;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.57;ReadPosRankSum=-0.803;SOR=0.514 GT:AD:DP:GQ:PL 0/1:173,178:351:99:4439,0,4515 chr2 159198937 . T A 1806.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.282;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.85;ReadPosRankSum=-1.809;SOR=0.677 GT:AD:DP:GQ:PL 0/1:48,66:114:99:1835,0,1219 chr2 159217021 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 159217384 . G C 851.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.693;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=2.161;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.65;ReadPosRankSum=-0.250;SOR=1.112 GT:AD:DP:GQ:PL 0/1:49,31:80:99:880,0,1356 chr2 159219515 . C G 1234.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.102;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=2.821;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.42;ReadPosRankSum=-0.072;SOR=1.061 GT:AD:DP:GQ:PL 0/1:49,43:92:99:1263,0,1395 chr2 159219566 . T A 1046.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.965;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=1.905;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=-0.968;SOR=1.022 GT:AD:DP:GQ:PL 0/1:44,33:77:99:1075,0,1443 chr2 159225843 . C T 4881.77 PASS AC=2;AF=1.00;AN=2;DP=127;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.91;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,127:127:99:4910,382,0 chr2 159225853 . A G 1459.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.316;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=0.737;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.16;ReadPosRankSum=-0.441;SOR=0.564 GT:AD:DP:GQ:PL 0/1:66,54:120:99:1488,0,1874 chr2 159225873 . T A 1341.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.522;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.20;ReadPosRankSum=-0.591;SOR=0.702 GT:AD:DP:GQ:PL 0/1:60,50:110:99:1370,0,1662 chr2 159225991 . G A 321.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.32;ReadPosRankSum=0.507;SOR=0.610 GT:AD:DP:GQ:PL 0/1:11,10:21:99:350,0,396 chr2 159226034 . C T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-2.189;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr2 159227713 . G A 1650.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.48;SOR=4.223 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1679,132,0 chr2 159227752 . A G 2639.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.55;SOR=2.568 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2668,222,0 chr2 159227962 . A C 988.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.355;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.972;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=-0.097;SOR=0.853 GT:AD:DP:GQ:PL 0/1:40,37:77:99:1017,0,1102 chr2 159228023 . A G 916.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.57;SOR=3.098 GT:AD:DP:GQ:PL 1/1:0,26:26:78:945,78,0 chr2 159229259 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 159229277 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 159229341 . T C 116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.025;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=-0.355;SOR=0.250 GT:AD:DP:GQ:PL 0/1:5,5:10:99:145,0,167 chr2 159230142 . C T 7099.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.569;ClippingRankSum=0.000;DP=370;ExcessHet=3.0103;FS=1.699;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.29;ReadPosRankSum=0.840;SOR=0.807 GT:AD:DP:GQ:PL 0/1:184,184:368:99:7128,0,8164 chr2 159230143 . A G 7099.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.046;ClippingRankSum=0.000;DP=368;ExcessHet=3.0103;FS=1.696;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.40;ReadPosRankSum=0.974;SOR=0.785 GT:AD:DP:GQ:PL 0/1:184,182:366:99:7128,0,8164 chr2 159230181 . A G 5363.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.318;ClippingRankSum=0.000;DP=387;ExcessHet=3.0103;FS=0.764;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.90;ReadPosRankSum=-0.248;SOR=0.734 GT:AD:DP:GQ:PL 0/1:187,199:386:99:5392,0,4971 chr2 159231024 . T G 2697.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.66;SOR=2.049 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2726,262,0 chr2 159233795 . A C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 159256370 . G T 1153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.635;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=2.810;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.14;ReadPosRankSum=1.237;SOR=0.412 GT:AD:DP:GQ:PL 0/1:46,49:95:99:1182,0,1215 chr2 159257926 . G A 739.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.549;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.72;ReadPosRankSum=-0.647;SOR=0.836 GT:AD:DP:GQ:PL 0/1:41,28:69:99:768,0,1293 chr2 159259770 . A G 170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.218;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.721;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.83;ReadPosRankSum=2.078;SOR=0.374 GT:AD:DP:GQ:PL 0/1:16,9:25:99:199,0,476 chr2 159271394 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.73;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 159320432 . A C 1421.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.06;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1450,129,0 chr2 159325563 . T A 441.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.55;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,14:14:42:470,42,0 chr2 159325791 . C T 394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.131;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=3.211;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=-0.693;SOR=0.302 GT:AD:DP:GQ:PL 0/1:17,14:31:99:423,0,583 chr2 159336859 . T A 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.210;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.98;ReadPosRankSum=-1.408;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:244,0,161 chr2 159347423 . A C 313.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:342,27,0 chr2 159363825 . A G 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=1.150;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 159374597 . A G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 159385425 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr2 159386672 . T A 236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.198;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.91;ReadPosRankSum=-0.344;SOR=1.828 GT:AD:DP:GQ:PL 0/1:7,7:14:99:265,0,434 chr2 159386673 . A T 236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.980;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.91;ReadPosRankSum=0.170;SOR=1.828 GT:AD:DP:GQ:PL 0/1:7,7:14:99:265,0,434 chr2 159405210 . T C 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.549;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=-0.074;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:173,0,240 chr2 159439222 . G A 685.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.193;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=2.349;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.24;ReadPosRankSum=1.631;SOR=0.390 GT:AD:DP:GQ:PL 0/1:33,28:61:99:714,0,889 chr2 159623242 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 159623570 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 159623571 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 159637837 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 159643561 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 159648569 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 159676157 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 159676185 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 159696872 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 159745747 . A G 2509.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.92;SOR=2.568 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2538,221,0 chr2 159747941 . C T 2423.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.14;SOR=1.643 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2452,213,0 chr2 159748757 . T C 4101.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.96;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,117:117:99:4130,352,0 chr2 159748978 . C T 719.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.95;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:748,51,0 chr2 159748987 . T C 646.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.49;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:675,45,0 chr2 159750261 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 159762722 . T G 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.00;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 159780756 . C A 1079.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.49;SOR=3.841 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1108,87,0 chr2 159780813 . A G 1877.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.38;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1906,174,0 chr2 159783640 . C T 346.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.16;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:375,27,0 chr2 159798013 . G T 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr2 159806924 . T C 1019.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.99;SOR=2.019 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1048,90,0 chr2 159807167 . T C 1023.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.11;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1052,102,0 chr2 159808186 . A G 133.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:161,12,0 chr2 159815724 . T A 293.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.87;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:322,24,0 chr2 159817015 . A G 1680.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.96;SOR=2.170 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1709,153,0 chr2 159819916 . C A 2094.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.25;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2123,189,0 chr2 159820994 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 159821048 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 159831840 . C T 1055.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=39.29;SOR=5.211 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1084,81,0 chr2 159835467 . G A 434.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.852;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=1.675;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.75;ReadPosRankSum=0.017;SOR=0.327 GT:AD:DP:GQ:PL 0/1:20,17:37:99:463,0,610 chr2 159842107 . G A 269.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.48;ReadPosRankSum=0.114;SOR=1.445 GT:AD:DP:GQ:PL 0/1:4,8:12:99:298,0,99 chr2 159842189 . A C 681.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.217;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.94;ReadPosRankSum=-0.075;SOR=0.922 GT:AD:DP:GQ:PL 0/1:15,23:38:99:710,0,431 chr2 159846870 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 159850564 . C T 396.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.383;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=3.188;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.87;ReadPosRankSum=1.282;SOR=2.448 GT:AD:DP:GQ:PL 0/1:13,12:25:99:425,0,388 chr2 159851935 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 159852098 . C T 572.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.646;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=1.258;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.32;ReadPosRankSum=-0.689;SOR=0.983 GT:AD:DP:GQ:PL 0/1:17,23:40:99:601,0,385 chr2 159852134 . C G 1658.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.52;SOR=1.702 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1687,153,0 chr2 159854411 . T C 3284.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.20;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3313,306,0 chr2 159854737 . T C 761.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.12;SOR=2.030 GT:AD:DP:GQ:PL 1/1:0,23:23:69:790,69,0 chr2 159855045 . T G 2428.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.82;SOR=1.842 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2457,222,0 chr2 159872331 . T C 60.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.06;ReadPosRankSum=1.139;SOR=0.148 GT:AD:DP:GQ:PL 0/1:9,3:12:89:89,0,340 chr2 159872494 . C T 1127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.796;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.688;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.56;ReadPosRankSum=-1.174;SOR=0.609 GT:AD:DP:GQ:PL 0/1:66,52:118:99:1156,0,1744 chr2 159872623 . A C 1806.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=39.06;SOR=2.970 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1835,153,0 chr2 159873309 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 159878157 . T C 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.000;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr2 159880984 . A C 210.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.39;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:239,18,0 chr2 159881049 . G T 871.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.19;SOR=2.124 GT:AD:DP:GQ:PL 1/1:0,24:24:72:900,72,0 chr2 159881998 . A G 523.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.73;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:552,42,0 chr2 159885580 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 159885584 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 159899834 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 159904461 . C T 710.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.31;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,22:22:66:739,66,0 chr2 159906176 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 159912425 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 159921911 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 159949482 . C G 678.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.81;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:707,51,0 chr2 159951231 . A T 1389.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.88;SOR=2.059 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1418,135,0 chr2 159951564 . C T 1051.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.87;SOR=2.165 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1080,96,0 chr2 159976485 . A T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.74;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 159976677 . A G 2834.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.35;SOR=1.450 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2863,255,0 chr2 160005583 . G A 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.21;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 160016510 . G A 2563.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.05;SOR=2.484 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2592,237,0 chr2 160016759 . A G 3967.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.57;SOR=2.079 GT:AD:DP:GQ:PL 1/1:0,111:111:99:3996,334,0 chr2 160016886 . T C 1288.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.05;SOR=1.923 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1317,117,0 chr2 160020316 . A G 585.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.66;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:614,45,0 chr2 160028907 . G C 4822.77 PASS AC=2;AF=1.00;AN=2;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.11;SOR=0.934 GT:AD:DP:GQ:PL 1/1:0,155:155:99:4851,464,0 chr2 160028931 . T C 4980.77 PASS AC=2;AF=1.00;AN=2;DP=158;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.52;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,158:158:99:5009,474,0 chr2 160033162 . G A 2492.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.62;SOR=2.802 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2521,216,0 chr2 160042371 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 160045006 . A G 3983.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.20;SOR=0.991 GT:AD:DP:GQ:PL 1/1:0,120:120:99:4012,359,0 chr2 160045512 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 160059308 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 160062090 . A G 260.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.71;SOR=0.859 GT:AD:DP:GQ:PL 1/1:0,11:11:33:289,33,0 chr2 160062509 . C T 1655.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.94;SOR=2.419 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1684,123,0 chr2 160081691 . T A 513.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.11;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,16:16:48:542,48,0 chr2 160101634 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 160107546 . G T 1203.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.33;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,26:26:84:1232,84,0 chr2 160107548 . A G 1203.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.55;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1232,84,0 chr2 160111934 . C T 217.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.548;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.10;ReadPosRankSum=-0.305;SOR=0.495 GT:AD:DP:GQ:PL 0/1:10,8:18:99:246,0,364 chr2 160112327 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 160126549 . G C 357.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.925;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=2.611;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.50;ReadPosRankSum=-0.088;SOR=0.371 GT:AD:DP:GQ:PL 0/1:47,18:65:99:386,0,1425 chr2 160137289 . A T 1939.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.80;SOR=1.392 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1968,183,0 chr2 160172481 . T C 1558.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.17;SOR=0.919 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1587,141,0 chr2 160172707 . G A 1950.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.12;SOR=1.066 GT:AD:DP:GQ:PL 1/1:0,67:67:99:1979,200,0 chr2 160220569 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 160265623 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 160278489 . G C 307.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.20;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:336,27,0 chr2 160313317 . C G 2324.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.69;SOR=1.211 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2353,207,0 chr2 160313445 . G C 691.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.60;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,19:19:57:720,57,0 chr2 160318182 . C T 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.74;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 160372083 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 160397685 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 160535458 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 160605257 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 160696515 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 160701956 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 160940818 . C T 528.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.680;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.55;ReadPosRankSum=0.785;SOR=0.604 GT:AD:DP:GQ:PL 0/1:15,19:34:99:557,0,453 chr2 160941002 . A G 861.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.052;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=1.029;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.67;ReadPosRankSum=-1.988;SOR=0.636 GT:AD:DP:GQ:PL 0/1:26,29:55:99:890,0,718 chr2 160941322 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 161040648 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 161203306 . G A 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr2 161203458 . A T 2221.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.29;SOR=1.643 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2250,213,0 chr2 161235325 . T C 2160.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.24;SOR=2.267 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2189,195,0 chr2 161318779 . T C 3004.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.31;SOR=1.305 GT:AD:DP:GQ:PL 1/1:0,93:93:99:3033,278,0 chr2 161350294 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 161369825 . G T 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.62;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr2 161370327 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 161385715 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 161391261 . C T 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr2 161420470 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 161424237 . G A 6213.77 PASS AC=2;AF=1.00;AN=2;DP=179;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.91;SOR=2.412 GT:AD:DP:GQ:PL 1/1:0,178:178:99:6242,533,0 chr2 161425118 . G C 59.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.34;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:87,6,0 chr2 161425120 . C T 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr2 161425131 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 161425139 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 161425143 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 161425144 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 161425155 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 161425160 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 161425163 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 161425165 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 161472301 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 161487736 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 161503472 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.77;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 161505388 . A G 1313.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.080;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=0.733;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.76;ReadPosRankSum=0.926;SOR=0.795 GT:AD:DP:GQ:PL 0/1:49,54:103:99:1342,0,1325 chr2 161526783 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 161532942 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 161650567 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 161873802 . T C 266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.076;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.88;ReadPosRankSum=1.274;SOR=0.804 GT:AD:DP:GQ:PL 0/1:18,9:27:99:295,0,636 chr2 161901166 . A G 137.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.289;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.48;ReadPosRankSum=0.081;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:166,0,181 chr2 161958752 . C A 601.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.712 GT:AD:DP:GQ:PL 1/1:0,17:17:51:630,51,0 chr2 161965005 . G A 2070.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.03;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2099,174,0 chr2 162047503 . T C 476.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.342;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.44;ReadPosRankSum=-2.001;SOR=0.223 GT:AD:DP:GQ:PL 0/1:14,15:29:99:505,0,498 chr2 162149164 . G A 1085.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.425;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=4.995;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.24;ReadPosRankSum=-0.580;SOR=1.228 GT:AD:DP:GQ:PL 0/1:63,43:106:99:1114,0,1635 chr2 162194905 . C T 1004.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.41;SOR=1.839 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1033,93,0 chr2 162198214 . C T 924.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.674;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=8.581;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.02;ReadPosRankSum=-0.567;SOR=1.678 GT:AD:DP:GQ:PL 0/1:37,34:71:99:953,0,943 chr2 162198558 . T G 667.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.87;ReadPosRankSum=-1.170;SOR=1.179 GT:AD:DP:GQ:PL 0/1:13,19:32:99:696,0,447 chr2 162200442 . A C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 162214086 . T A 458.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.214;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=1.830;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.90;ReadPosRankSum=-0.368;SOR=1.432 GT:AD:DP:GQ:PL 0/1:17,16:33:99:487,0,460 chr2 162214197 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 162218893 . G C 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=-0.623;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:137,0,221 chr2 162221685 . T A 2127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.212;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=-0.551;SOR=0.719 GT:AD:DP:GQ:PL 0/1:75,83:158:99:2156,0,1889 chr2 162224283 . A G 1426.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.036;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=1.826;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.27;ReadPosRankSum=-0.429;SOR=0.461 GT:AD:DP:GQ:PL 0/1:43,57:100:99:1455,0,1173 chr2 162224472 . A G 1134.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.686;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=0.915;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.47;ReadPosRankSum=-0.870;SOR=0.894 GT:AD:DP:GQ:PL 0/1:48,43:91:99:1163,0,1410 chr2 162226640 . T C 475.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.337;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.22;ReadPosRankSum=0.446;SOR=0.782 GT:AD:DP:GQ:PL 0/1:14,22:36:99:504,0,273 chr2 162267541 . C T 599.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.108;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=1.087;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.17;ReadPosRankSum=-0.751;SOR=0.444 GT:AD:DP:GQ:PL 0/1:34,25:59:99:628,0,1004 chr2 162267644 . C A 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.170;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.55;ReadPosRankSum=0.344;SOR=0.693 GT:AD:DP:GQ:PL 0/1:7,7:14:99:218,0,217 chr2 162272215 . A G 259.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.187;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.43;ReadPosRankSum=-1.434;SOR=0.184 GT:AD:DP:GQ:PL 0/1:9,9:18:99:288,0,322 chr2 162272314 . T C 1856.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=1.649 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1885,177,0 chr2 162278172 . A T 635.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.054;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=3.391;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.18;ReadPosRankSum=-1.901;SOR=1.445 GT:AD:DP:GQ:PL 0/1:16,21:37:99:664,0,387 chr2 162280217 . G C 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.605;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=-0.191;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,203 chr2 162280261 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 162281173 . G A 335.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.474;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.98;ReadPosRankSum=-0.503;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,10:14:99:364,0,125 chr2 162281185 . G A 412.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.433;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.80;ReadPosRankSum=-1.164;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,12:16:99:441,0,119 chr2 162281238 . C T 944.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.956;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.62;ReadPosRankSum=-0.573;SOR=0.657 GT:AD:DP:GQ:PL 0/1:13,27:40:99:973,0,423 chr2 162281361 . C G 1935.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.345;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=6.429;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.13;ReadPosRankSum=-0.903;SOR=0.353 GT:AD:DP:GQ:PL 0/1:63,74:137:99:1964,0,1731 chr2 162281473 . T C 1097.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.733;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.20;ReadPosRankSum=-1.373;SOR=0.739 GT:AD:DP:GQ:PL 0/1:55,43:98:99:1126,0,1594 chr2 162282275 . G A 270.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.550;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.05;ReadPosRankSum=0.059;SOR=1.179 GT:AD:DP:GQ:PL 0/1:6,9:15:99:299,0,172 chr2 162288535 . A C 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.253;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr2 162293386 . G T 169.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.86;ReadPosRankSum=-0.366;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:198,0,238 chr2 162293455 . T C 776.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.809;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.715;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.18;ReadPosRankSum=0.580;SOR=0.359 GT:AD:DP:GQ:PL 0/1:22,26:48:99:805,0,741 chr2 162293769 . A C 320.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.05;ReadPosRankSum=-1.440;SOR=0.275 GT:AD:DP:GQ:PL 0/1:7,9:16:99:349,0,537 chr2 162293772 . T G 286.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.111;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.12;ReadPosRankSum=-0.837;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,8:15:99:315,0,540 chr2 162319146 . A C 1318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.280;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=3.919;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.18;ReadPosRankSum=-2.583;SOR=0.679 GT:AD:DP:GQ:PL 0/1:41,52:93:99:1347,0,978 chr2 162344168 . T C 1219.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.611;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=1.510;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.16;ReadPosRankSum=-2.679;SOR=0.858 GT:AD:DP:GQ:PL 0/1:69,51:120:99:1248,0,1874 chr2 162344402 . C G 514.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.572;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=4.017;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.51;ReadPosRankSum=-0.778;SOR=1.768 GT:AD:DP:GQ:PL 0/1:32,17:49:99:543,0,1019 chr2 162358913 . C A 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:63,0,33 chr2 162359599 . C T 343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.439;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=6.551;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.28;ReadPosRankSum=-0.832;SOR=0.120 GT:AD:DP:GQ:PL 0/1:13,15:28:99:372,0,374 chr2 162373675 . C T 745.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.486;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=3.497;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.13;ReadPosRankSum=-0.231;SOR=1.226 GT:AD:DP:GQ:PL 0/1:38,29:67:99:774,0,1046 chr2 162400439 . G T 570.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.364;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=1.288;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=-1.358;SOR=0.943 GT:AD:DP:GQ:PL 0/1:30,19:49:99:599,0,867 chr2 162435107 . C T 77.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.751;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.64;ReadPosRankSum=1.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:5,4:9:99:106,0,113 chr2 162435471 . G A 1303.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.645;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=1.534;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.96;ReadPosRankSum=0.230;SOR=0.756 GT:AD:DP:GQ:PL 0/1:58,51:109:99:1332,0,1628 chr2 162445825 . T C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 162518067 . G A 1909.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.130;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=0.664;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.92;ReadPosRankSum=-1.295;SOR=0.620 GT:AD:DP:GQ:PL 0/1:56,72:128:99:1938,0,1431 chr2 162766208 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 162766226 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 162786101 . A G 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr2 162838368 . C G 4036.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.13;SOR=1.130 GT:AD:DP:GQ:PL 1/1:0,91:91:99:4065,277,0 chr2 162838376 . G A 4210.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.81;SOR=1.109 GT:AD:DP:GQ:PL 1/1:0,95:95:99:4239,292,0 chr2 162931431 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 162943329 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 163497818 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 163540132 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 163540196 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 163714984 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 163914736 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 164492949 . G A 776.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.86;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,21:21:63:805,63,0 chr2 164493392 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 164494698 . C T 303.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.75;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:332,27,0 chr2 164497202 . C T 3572.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=0.888 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3601,329,0 chr2 164502162 . A G 1323.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.82;SOR=3.675 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1352,102,0 chr2 164568327 . A G 2982.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.68;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,86:86:99:3011,258,0 chr2 164619743 . A T 4028.77 PASS AC=2;AF=1.00;AN=2;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.75;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,131:131:99:4057,393,0 chr2 164621393 . G C 446.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.37;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:39:475,39,0 chr2 164687561 . T C 622.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.011;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.71;ReadPosRankSum=-0.669;SOR=0.622 GT:AD:DP:GQ:PL 0/1:25,24:49:99:651,0,681 chr2 164687940 . G A 239.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=29.98;ReadPosRankSum=-0.319;SOR=2.833 GT:AD:DP:GQ:PL 0/1:1,7:8:18:268,0,18 chr2 164694894 . G A 2056.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;ClippingRankSum=0.000;DP=154;ExcessHet=3.0103;FS=1.289;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=-0.060;SOR=0.838 GT:AD:DP:GQ:PL 0/1:77,76:153:99:2085,0,2072 chr2 164703333 . G A 523.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.288;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.684;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.77;ReadPosRankSum=1.279;SOR=0.382 GT:AD:DP:GQ:PL 0/1:24,17:41:99:552,0,765 chr2 164703726 . A G 285.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.724;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=4.200;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=-1.026;SOR=0.169 GT:AD:DP:GQ:PL 0/1:8,14:22:99:314,0,200 chr2 164705255 . A G 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=-1.981;SOR=0.160 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,167 chr2 164722071 . A G 4617.77 PASS AC=2;AF=1.00;AN=2;DP=137;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.71;SOR=2.152 GT:AD:DP:GQ:PL 1/1:0,137:137:99:4646,410,0 chr2 164727897 . C T 638.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.08;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:667,48,0 chr2 164729956 . T C 280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.326;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.37;ReadPosRankSum=-0.357;SOR=0.446 GT:AD:DP:GQ:PL 0/1:12,9:21:99:309,0,404 chr2 164730142 . C T 556.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.002;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.10;ReadPosRankSum=-1.356;SOR=0.887 GT:AD:DP:GQ:PL 0/1:23,23:46:99:585,0,521 chr2 164730195 . T G 246.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.708;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=-0.637;SOR=1.609 GT:AD:DP:GQ:PL 0/1:10,9:19:99:275,0,327 chr2 164773950 . T C 470.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.38;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:499,36,0 chr2 164779822 . T C 1053.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.244;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.24;ReadPosRankSum=0.450;SOR=0.701 GT:AD:DP:GQ:PL 0/1:31,43:74:99:1082,0,797 chr2 164800556 . T C 198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.764;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.36;ReadPosRankSum=-1.024;SOR=0.711 GT:AD:DP:GQ:PL 0/1:16,11:27:99:227,0,473 chr2 164800586 . G C 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.161;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.08;ReadPosRankSum=0.212;SOR=1.085 GT:AD:DP:GQ:PL 0/1:15,7:22:99:140,0,573 chr2 164800608 . A T 248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.381;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=2.869;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.55;ReadPosRankSum=0.245;SOR=0.122 GT:AD:DP:GQ:PL 0/1:4,12:16:99:277,0,171 chr2 164800632 . A C 370.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.79;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:399,27,0 chr2 164833732 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 164842037 . G A 1155.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.605;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=1.744;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=0.077;SOR=0.478 GT:AD:DP:GQ:PL 0/1:42,47:89:99:1184,0,1178 chr2 164937458 . G A 696.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.011;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.40;ReadPosRankSum=1.069;SOR=0.693 GT:AD:DP:GQ:PL 0/1:26,26:52:99:725,0,725 chr2 165139817 . T C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:95:107,0,95 chr2 165155693 . C T 581.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.252;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=13.938;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.93;ReadPosRankSum=-0.854;SOR=2.994 GT:AD:DP:GQ:PL 0/1:25,20:45:99:610,0,670 chr2 165156121 . G A 457.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.046;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.17;ReadPosRankSum=-0.318;SOR=0.601 GT:AD:DP:GQ:PL 0/1:23,18:41:99:486,0,667 chr2 165156171 . A C 172.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.958;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=5.180;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.09;ReadPosRankSum=-1.746;SOR=0.116 GT:AD:DP:GQ:PL 0/1:10,9:19:99:201,0,361 chr2 165156282 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.524;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,213 chr2 165156288 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.253;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,213 chr2 165156297 . G C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,213 chr2 165295601 . T C 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,72 chr2 165295675 . A G 973.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.52;SOR=5.058 GT:AD:DP:GQ:PL 1/1:0,25:25:75:1002,75,0 chr2 165295879 . G A 1479.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.865;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=4.194;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.38;ReadPosRankSum=-0.818;SOR=0.958 GT:AD:DP:GQ:PL 0/1:72,58:130:99:1508,0,1871 chr2 165296751 . T C 90.18 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.04;ReadPosRankSum=-0.253;SOR=1.447 GT:AD:DP:GQ:PL 0/1:1,4:5:10:118,0,10 chr2 165296989 . A G 131.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:160,15,0 chr2 165309391 . G A 1513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.198;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.748;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.28;ReadPosRankSum=1.906;SOR=0.804 GT:AD:DP:GQ:PL 0/1:58,56:114:99:1542,0,1591 chr2 165310162 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 165310656 . T A 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=0.967;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,126 chr2 165313563 . A G 716.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.014;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=4.251;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.38;ReadPosRankSum=0.202;SOR=0.180 GT:AD:DP:GQ:PL 0/1:15,24:39:99:745,0,459 chr2 165313617 . T C 2884.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.78;SOR=1.954 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2913,264,0 chr2 165315807 . A G 1289.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.07;SOR=2.362 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1318,117,0 chr2 165322847 . C A 343.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.20;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:372,27,0 chr2 165323140 . C T 3342.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.086;ClippingRankSum=0.000;DP=229;ExcessHet=3.0103;FS=1.724;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.60;ReadPosRankSum=0.778;SOR=0.569 GT:AD:DP:GQ:PL 0/1:103,126:229:99:3371,0,2896 chr2 165326704 . G T 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.85;ReadPosRankSum=0.921;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,2:8:59:59,0,227 chr2 165331685 . A C 451.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.612;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=3.119;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.58;ReadPosRankSum=-0.226;SOR=0.120 GT:AD:DP:GQ:PL 0/1:13,16:29:99:480,0,444 chr2 165344371 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 165354905 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 165367537 . G A 546.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.466;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.85;ReadPosRankSum=0.422;SOR=0.356 GT:AD:DP:GQ:PL 0/1:12,17:29:99:575,0,412 chr2 165370468 . A G 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.489;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,184 chr2 165372999 . C T 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.69;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:59:59,0,72 chr2 165373412 . T C 2597.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.64;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2626,225,0 chr2 165377566 . A G 256.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.464;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=1.957;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.26;ReadPosRankSum=0.000;SOR=0.877 GT:AD:DP:GQ:PL 0/1:8,10:18:99:285,0,211 chr2 165420043 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 165426869 . A C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 165481308 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 165593280 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 165632290 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 165657497 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 165657655 . C G 655.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.601;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=7.405;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.81;ReadPosRankSum=-0.164;SOR=2.376 GT:AD:DP:GQ:PL 0/1:19,20:39:99:684,0,508 chr2 165658084 . A G 1361.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.92;SOR=2.613 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1390,117,0 chr2 165676150 . T C 252.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.27;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:281,21,0 chr2 165679408 . C T 987.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.643;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=2.784;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.62;ReadPosRankSum=-0.132;SOR=1.042 GT:AD:DP:GQ:PL 0/1:53,40:93:99:1016,0,1592 chr2 165737759 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 165754496 . C T 280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.458;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=3.983;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.20;ReadPosRankSum=-0.312;SOR=1.609 GT:AD:DP:GQ:PL 0/1:28,11:39:99:309,0,823 chr2 165754576 . C T 562.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.232;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=4.630;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.40;ReadPosRankSum=0.373;SOR=1.265 GT:AD:DP:GQ:PL 0/1:48,28:76:99:591,0,1402 chr2 165761752 . C T 874.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.880;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=1.755;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.51;ReadPosRankSum=-0.147;SOR=0.941 GT:AD:DP:GQ:PL 0/1:58,34:92:99:903,0,1636 chr2 165764844 . T C 2781.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.04;SOR=2.862 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2810,237,0 chr2 165770096 . G A 206.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.353;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.85;ReadPosRankSum=0.674;SOR=0.760 GT:AD:DP:GQ:PL 0/1:12,9:21:99:235,0,322 chr2 165855151 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 165858696 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 165876328 . G T 1048.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.044;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.862;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.45;ReadPosRankSum=-1.402;SOR=0.876 GT:AD:DP:GQ:PL 0/1:36,42:78:99:1077,0,963 chr2 165884068 . C T 401.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.371;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=7.857;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.34;ReadPosRankSum=1.906;SOR=2.116 GT:AD:DP:GQ:PL 0/1:28,15:43:99:430,0,719 chr2 165884153 . A G 395.74 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=32.98;ReadPosRankSum=-0.647;SOR=2.147 GT:AD:DP:GQ:PL 0/1:1,11:12:6:423,0,6 chr2 165884848 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 165897158 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 165911403 . C G 653.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.212;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.83;ReadPosRankSum=-0.197;SOR=0.721 GT:AD:DP:GQ:PL 0/1:45,29:74:99:682,0,1163 chr2 165915153 . C T 327.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.497;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=-0.611;SOR=0.317 GT:AD:DP:GQ:PL 0/1:8,11:19:99:356,0,276 chr2 165924648 . G A 1327.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.121;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=1.410;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.91;ReadPosRankSum=-0.015;SOR=0.838 GT:AD:DP:GQ:PL 0/1:82,52:134:99:1356,0,2228 chr2 165926477 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 165929869 . T C 231.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.224;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.49;ReadPosRankSum=-1.344;SOR=0.458 GT:AD:DP:GQ:PL 0/1:7,9:16:99:260,0,178 chr2 165930463 . A C 297.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.80;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:326,24,0 chr2 165931549 . T C 354.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.641;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.34;ReadPosRankSum=-0.487;SOR=1.061 GT:AD:DP:GQ:PL 0/1:3,11:14:83:383,0,83 chr2 165931826 . T C 4915.77 PASS AC=2;AF=1.00;AN=2;DP=156;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.51;SOR=1.261 GT:AD:DP:GQ:PL 1/1:0,156:156:99:4944,468,0 chr2 165932929 . A G 977.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.316;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=1.006;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.59;ReadPosRankSum=-0.382;SOR=0.938 GT:AD:DP:GQ:PL 0/1:28,39:67:99:1006,0,753 chr2 165940940 . C A 513.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.25;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:542,45,0 chr2 165941136 . C T 3877.77 PASS AC=2;AF=1.00;AN=2;DP=127;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.53;SOR=0.843 GT:AD:DP:GQ:PL 1/1:0,127:127:99:3906,380,0 chr2 165943086 . T C 601.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.34;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:630,48,0 chr2 165943383 . G A 1104.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.06;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1133,84,0 chr2 165945414 . C G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 165953543 . C T 148.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:177,15,0 chr2 165953863 . A G 1137.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.80;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1166,96,0 chr2 165991989 . T C 2975.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.121;ClippingRankSum=0.000;DP=222;ExcessHet=3.0103;FS=3.896;MLEAC=1;MLEAF=0.500;MQ=57.90;MQRankSum=-1.312;QD=13.40;ReadPosRankSum=-1.285;SOR=0.975 GT:AD:DP:GQ:PL 0/1:114,108:222:99:3004,0,2963 chr2 165992564 . T A 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr2 165999649 . G A 118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.938;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.57;ReadPosRankSum=-0.035;SOR=0.922 GT:AD:DP:GQ:PL 0/1:19,7:26:99:147,0,462 chr2 166009934 . A T 127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.033;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=2.823;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.10;ReadPosRankSum=0.224;SOR=1.751 GT:AD:DP:GQ:PL 0/1:13,5:18:99:156,0,345 chr2 166013988 . A G 198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.85;ReadPosRankSum=-0.319;SOR=1.863 GT:AD:DP:GQ:PL 0/1:2,6:8:59:227,0,59 chr2 166035938 . A T 736.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.95;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:51:765,51,0 chr2 166036278 . C T 1570.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.79;SOR=1.508 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1599,132,0 chr2 166036571 . G A 692.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.64;SOR=2.531 GT:AD:DP:GQ:PL 1/1:0,20:20:60:721,60,0 chr2 166037720 . T C 3763.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.53;SOR=2.649 GT:AD:DP:GQ:PL 1/1:0,109:109:99:3792,327,0 chr2 166039309 . A G 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=1.448;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:173,0,254 chr2 166039633 . T G 1031.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.27;SOR=1.352 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1060,99,0 chr2 166039777 . T G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 166040170 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 166040707 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 166040716 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 166041354 . A G 4111.77 PASS AC=2;AF=1.00;AN=2;DP=134;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.92;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,133:133:99:4140,398,0 chr2 166041507 . G T 493.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.677;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=1.512;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.72;ReadPosRankSum=0.254;SOR=1.157 GT:AD:DP:GQ:PL 0/1:17,19:36:99:522,0,432 chr2 166042592 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 166044096 . A C 1246.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.11;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1275,102,0 chr2 166045330 . A G 171.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.228;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.74;ReadPosRankSum=0.055;SOR=0.307 GT:AD:DP:GQ:PL 0/1:10,6:16:99:200,0,334 chr2 166046678 . A C 977.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.72;SOR=1.942 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1006,87,0 chr2 166046718 . C T 1650.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.02;SOR=1.519 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1679,150,0 chr2 166046935 . T C 1003.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1032,96,0 chr2 166047515 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 166047836 . G A 1497.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.04;SOR=2.409 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1526,132,0 chr2 166048865 . A G 750.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.88;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,26:26:78:779,78,0 chr2 166048970 . G A 556.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.80;SOR=2.049 GT:AD:DP:GQ:PL 1/1:0,16:16:48:585,48,0 chr2 166049062 . T A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 166053034 . C T 782.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.65;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,22:22:66:811,66,0 chr2 166053049 . C A 635.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.88;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:51:664,51,0 chr2 166058385 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 166058825 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 166073704 . T A 1044.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.40;SOR=3.841 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1073,87,0 chr2 166140833 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 166140836 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 166141998 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 166142028 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 166151096 . A G 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr2 166198883 . T C 591.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.160;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=1.039;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.57;ReadPosRankSum=-0.303;SOR=0.507 GT:AD:DP:GQ:PL 0/1:33,23:56:99:620,0,959 chr2 166199827 . C A 529.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.800;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=5.656;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.29;ReadPosRankSum=-0.327;SOR=1.487 GT:AD:DP:GQ:PL 0/1:35,22:57:99:558,0,951 chr2 166199918 . G A 798.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.28;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,24:24:72:827,72,0 chr2 166203939 . A T 476.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.05;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,14:14:42:505,42,0 chr2 166227919 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 166228614 . T G 355.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.59;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:384,30,0 chr2 166233226 . C T 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=0.842;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,137 chr2 166233466 . T C 675.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.548;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=3.558;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.08;ReadPosRankSum=0.264;SOR=1.032 GT:AD:DP:GQ:PL 0/1:34,27:61:99:704,0,896 chr2 166233532 . G A 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.263;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=1.662;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.41;ReadPosRankSum=0.824;SOR=1.230 GT:AD:DP:GQ:PL 0/1:23,13:36:99:331,0,668 chr2 166242648 . A G 1006.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.51;SOR=1.352 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1035,99,0 chr2 166280610 . C T 1518.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.119;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=3.148;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.51;ReadPosRankSum=2.159;SOR=0.985 GT:AD:DP:GQ:PL 0/1:68,64:132:99:1547,0,1661 chr2 166293183 . G A 599.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.078;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=4.388;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.21;ReadPosRankSum=0.550;SOR=0.184 GT:AD:DP:GQ:PL 0/1:16,21:37:99:628,0,491 chr2 166445067 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 166638093 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 166638112 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 166682385 . T A 40.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:68,6,0 chr2 166682386 . A C 40.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:68,6,0 chr2 166710919 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 166903438 . C T 2062.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.79;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2091,200,0 chr2 167210479 . T A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 167218025 . G A 173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=0.187;SOR=0.340 GT:AD:DP:GQ:PL 0/1:10,6:16:99:202,0,365 chr2 167239744 . T C 463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.801;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=6.532;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.18;ReadPosRankSum=0.365;SOR=2.712 GT:AD:DP:GQ:PL 0/1:13,14:27:99:492,0,501 chr2 167241689 . A C 456.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.027;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.76;ReadPosRankSum=-0.304;SOR=0.473 GT:AD:DP:GQ:PL 0/1:8,14:22:99:485,0,264 chr2 167243228 . T C 1452.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.246;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=1.439;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.72;ReadPosRankSum=0.282;SOR=0.869 GT:AD:DP:GQ:PL 0/1:69,55:124:99:1481,0,2015 chr2 167243265 . C G 2159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.087;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=0.648;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.36;ReadPosRankSum=-0.389;SOR=0.609 GT:AD:DP:GQ:PL 0/1:72,60:132:99:2188,0,3570 chr2 167243286 . T C 2101.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.245;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=2.210;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.68;ReadPosRankSum=-0.380;SOR=0.752 GT:AD:DP:GQ:PL 0/1:76,58:134:99:2130,0,3701 chr2 167246794 . G A 792.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.073;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.96;ReadPosRankSum=-0.696;SOR=0.703 GT:AD:DP:GQ:PL 0/1:23,30:53:99:821,0,597 chr2 167247353 . G A 2401.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.378;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=1.357;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.91;ReadPosRankSum=-1.104;SOR=0.728 GT:AD:DP:GQ:PL 0/1:56,86:142:99:2430,0,1404 chr2 167247415 . A G 1990.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.866;ClippingRankSum=0.000;DP=129;ExcessHet=3.0103;FS=9.695;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.43;ReadPosRankSum=-0.518;SOR=1.478 GT:AD:DP:GQ:PL 0/1:60,69:129:99:2019,0,1500 chr2 167247689 . C T 1189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.582;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=2.427;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.35;ReadPosRankSum=-0.438;SOR=0.461 GT:AD:DP:GQ:PL 0/1:64,51:115:99:1218,0,1806 chr2 167247860 . A C 988.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.090;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.36;ReadPosRankSum=-0.276;SOR=0.714 GT:AD:DP:GQ:PL 0/1:43,37:80:99:1017,0,1134 chr2 167248117 . G A 708.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.817;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=1.001;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.43;ReadPosRankSum=-0.072;SOR=0.841 GT:AD:DP:GQ:PL 0/1:32,25:57:99:737,0,853 chr2 167248478 . G T 738.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.378;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=1.007;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.96;ReadPosRankSum=-0.306;SOR=0.644 GT:AD:DP:GQ:PL 0/1:28,29:57:99:767,0,760 chr2 167249575 . G A 711.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.030;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=1.035;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.71;ReadPosRankSum=1.280;SOR=0.488 GT:AD:DP:GQ:PL 0/1:31,25:56:99:740,0,941 chr2 167249736 . G A 756.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.361;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=1.012;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.28;ReadPosRankSum=0.533;SOR=0.507 GT:AD:DP:GQ:PL 0/1:27,30:57:99:785,0,764 chr2 167250645 . G A 480.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.387;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.29;ReadPosRankSum=-0.600;SOR=0.703 GT:AD:DP:GQ:PL 0/1:40,18:58:99:509,0,1313 chr2 167250981 . A G 1161.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.167;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.793;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.05;ReadPosRankSum=-0.528;SOR=0.578 GT:AD:DP:GQ:PL 0/1:47,42:89:99:1190,0,1355 chr2 167251847 . A G 2444.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.512;ClippingRankSum=0.000;DP=176;ExcessHet=3.0103;FS=7.580;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.89;ReadPosRankSum=-0.358;SOR=0.780 GT:AD:DP:GQ:PL 0/1:86,90:176:99:2473,0,2279 chr2 167259200 . T G 1057.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.243;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.06;ReadPosRankSum=-2.783;SOR=0.634 GT:AD:DP:GQ:PL 0/1:25,37:62:99:1086,0,688 chr2 167259259 . G C 989.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.112;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.94;ReadPosRankSum=0.341;SOR=0.739 GT:AD:DP:GQ:PL 0/1:35,36:71:99:1018,0,966 chr2 167379760 . A G 237.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,8:8:24:266,24,0 chr2 167519843 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 167522930 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 167714266 . T C 1514.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.012;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=5.041;MLEAC=1;MLEAF=0.500;MQ=59.89;MQRankSum=0.835;QD=10.52;ReadPosRankSum=-0.213;SOR=0.542 GT:AD:DP:GQ:PL 0/1:86,58:144:99:1543,0,2497 chr2 167714534 . T C 1032.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.629;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=4.574;MLEAC=1;MLEAF=0.500;MQ=59.91;MQRankSum=-1.138;QD=12.91;ReadPosRankSum=2.333;SOR=1.291 GT:AD:DP:GQ:PL 0/1:46,34:80:99:1061,0,1392 chr2 167715583 . G T 2156.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.65;QD=29.23;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,48:48:99:2185,147,0 chr2 167715588 . A G 2180.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.67;QD=34.97;SOR=1.656 GT:AD:DP:GQ:PL 1/1:0,50:50:99:2209,150,0 chr2 167715928 . G A 2503.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.88;QD=30.91;SOR=0.768 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2532,241,0 chr2 167805555 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 167805556 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 168049805 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 168049892 . T C 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 168129365 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr2 168129644 . A G 929.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.06;SOR=1.688 GT:AD:DP:GQ:PL 1/1:0,29:29:87:958,87,0 chr2 168140265 . T C 415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.429;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.32;ReadPosRankSum=-1.232;SOR=0.560 GT:AD:DP:GQ:PL 0/1:10,14:24:99:444,0,311 chr2 168140587 . A G 591.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.296;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=2.984;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.91;ReadPosRankSum=0.020;SOR=1.270 GT:AD:DP:GQ:PL 0/1:16,19:35:99:620,0,494 chr2 168160950 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 168161032 . G T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.80;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:31:81,0,31 chr2 168163656 . G A 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.94;ReadPosRankSum=0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:72:120,0,72 chr2 168163669 . C T 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=30.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:72:120,0,72 chr2 168167631 . A G 171.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.681;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=1.875;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.81;ReadPosRankSum=-0.507;SOR=1.457 GT:AD:DP:GQ:PL 0/1:14,8:22:99:200,0,365 chr2 168171744 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 168216174 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 168232263 . T G 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=0.431;SOR=1.022 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,189 chr2 168247489 . T G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.85;ReadPosRankSum=-1.465;SOR=0.223 GT:AD:DP:GQ:PL 0/1:4,4:8:75:75,0,109 chr2 168261196 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 168331824 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 168331872 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 168339257 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 168390320 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 168390524 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 168413202 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 168413316 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 168452453 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 168456139 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.77;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 168548320 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 168549417 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 168561496 . C A 759.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.03;SOR=2.030 GT:AD:DP:GQ:PL 1/1:0,23:23:69:788,69,0 chr2 168631158 . A C 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.63;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 168665060 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 168741377 . A T 41.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:69,6,0 chr2 168802434 . A C 212.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.615;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.37;ReadPosRankSum=0.221;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,7:13:99:241,0,211 chr2 168818145 . T C 1214.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.31;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1243,87,0 chr2 168818153 . A T 1189.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=0.765 GT:AD:DP:GQ:PL 1/1:0,27:27:84:1218,84,0 chr2 168818254 . C G 560.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.51;SOR=1.292 GT:AD:DP:GQ:PL 1/1:0,19:19:57:589,57,0 chr2 168827947 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 168828762 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 168831170 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 168834219 . T C 2060.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.70;SOR=1.437 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2089,195,0 chr2 168834503 . G A 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.79;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr2 168834505 . G A 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.01;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr2 168834507 . G A 196.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.35;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:225,15,0 chr2 168850918 . C T 3322.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.65;SOR=1.222 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3351,314,0 chr2 168851042 . A G 4135.77 PASS AC=2;AF=1.00;AN=2;DP=124;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.35;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,124:124:99:4164,372,0 chr2 168861031 . T C 2745.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.32;SOR=2.362 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2774,240,0 chr2 168861114 . C T 722.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.21;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:751,54,0 chr2 168864867 . G A 3244.77 PASS AC=2;AF=1.00;AN=2;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.13;SOR=1.705 GT:AD:DP:GQ:PL 1/1:0,101:101:99:3273,302,0 chr2 168901031 . G A 73.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:101,9,0 chr2 168906638 . T C 2100.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.83;SOR=1.284 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2129,198,0 chr2 168907666 . G C 10175.77 PASS AC=2;AF=1.00;AN=2;DP=309;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.93;SOR=0.867 GT:AD:DP:GQ:PL 1/1:0,309:309:99:10204,927,0 chr2 168923386 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.34;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 168923856 . T C 1231.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.76;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1260,93,0 chr2 168932506 . T C 2644.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=1.080 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2673,267,0 chr2 168934928 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 168944978 . A G 1264.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.28;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1293,113,0 chr2 168945118 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 168957837 . A G 832.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.47;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,22:22:66:861,66,0 chr2 168958145 . G T 3318.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.19;SOR=2.256 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3347,299,0 chr2 168964108 . A G 1456.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.88;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1485,99,0 chr2 168964109 . T C 1456.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.67;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1485,99,0 chr2 168968233 . C A 103.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.49;ReadPosRankSum=0.364;SOR=0.138 GT:AD:DP:GQ:PL 0/1:12,4:16:99:132,0,1270 chr2 168968239 . C A 103.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.588;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.49;ReadPosRankSum=0.364;SOR=0.138 GT:AD:DP:GQ:PL 0/1:12,4:16:99:132,0,1270 chr2 168970367 . C T 671.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.776;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=6.892;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.93;ReadPosRankSum=0.061;SOR=2.215 GT:AD:DP:GQ:PL 0/1:25,20:45:99:700,0,770 chr2 168971767 . G A 285.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.280;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=1.657;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.85;ReadPosRankSum=-0.297;SOR=0.346 GT:AD:DP:GQ:PL 0/1:17,12:29:99:314,0,509 chr2 168971815 . A G 769.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.832;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=1.146;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.75;ReadPosRankSum=-0.031;SOR=0.425 GT:AD:DP:GQ:PL 0/1:28,28:56:99:798,0,853 chr2 168973541 . C T 189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.25;ReadPosRankSum=0.000;SOR=0.859 GT:AD:DP:GQ:PL 0/1:5,6:11:99:218,0,176 chr2 168973645 . G A 639.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.684;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=1.086;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.84;ReadPosRankSum=1.468;SOR=0.487 GT:AD:DP:GQ:PL 0/1:32,27:59:99:668,0,887 chr2 168973818 . A G 909.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.068;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.888;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.52;ReadPosRankSum=0.511;SOR=0.879 GT:AD:DP:GQ:PL 0/1:44,35:79:99:938,0,1243 chr2 168974005 . G A 244.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.530;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=1.089;SOR=1.179 GT:AD:DP:GQ:PL 0/1:10,9:19:99:273,0,292 chr2 168976242 . C T 400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.893;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.22;ReadPosRankSum=-0.480;SOR=0.313 GT:AD:DP:GQ:PL 0/1:11,11:22:99:429,0,785 chr2 168976251 . G C 482.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.902;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=4.678;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.31;ReadPosRankSum=-0.760;SOR=0.148 GT:AD:DP:GQ:PL 0/1:11,14:25:99:511,0,776 chr2 168986299 . T C 178.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.331;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=2.702;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.52;ReadPosRankSum=-0.386;SOR=0.148 GT:AD:DP:GQ:PL 0/1:10,7:17:99:207,0,333 chr2 169033275 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 169101161 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 169140144 . C T 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.46;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 169140541 . G A 5801.77 PASS AC=2;AF=1.00;AN=2;DP=174;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.34;SOR=1.259 GT:AD:DP:GQ:PL 1/1:0,174:174:99:5830,522,0 chr2 169144238 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 169144443 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 169144444 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 169145551 . A T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 169145573 . G T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 169146922 . T G 1758.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.825;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=2.277;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.07;ReadPosRankSum=1.038;SOR=0.671 GT:AD:DP:GQ:PL 0/1:58,67:125:99:1787,0,1302 chr2 169147128 . G A 346.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.151;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.40;ReadPosRankSum=0.676;SOR=0.481 GT:AD:DP:GQ:PL 0/1:6,11:17:99:375,0,168 chr2 169154475 . T C 716.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.573;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=1.101;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.05;ReadPosRankSum=0.715;SOR=0.929 GT:AD:DP:GQ:PL 0/1:25,26:51:99:745,0,674 chr2 169168830 . C T 222.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.192;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.92;ReadPosRankSum=-0.417;SOR=0.180 GT:AD:DP:GQ:PL 0/1:8,8:16:99:251,0,285 chr2 169170086 . C T 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.489;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=-0.414;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,173 chr2 169176479 . C T 4489.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.031;ClippingRankSum=0.000;DP=388;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.60;ReadPosRankSum=-1.417;SOR=0.682 GT:AD:DP:GQ:PL 0/1:207,180:387:99:4518,0,5368 chr2 169181752 . A C 191.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.150;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.75;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,5:13:99:220,0,401 chr2 169181753 . T C 191.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.98;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:220,0,401 chr2 169181788 . A T 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.69;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:59:59,0,71 chr2 169193962 . T C 458.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.149;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=3.456;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=-0.522;SOR=0.223 GT:AD:DP:GQ:PL 0/1:15,19:34:99:487,0,410 chr2 169196995 . C T 1378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.386;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=0.938;SOR=0.708 GT:AD:DP:GQ:PL 0/1:53,56:109:99:1407,0,1434 chr2 169197070 . C T 570.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.817;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=1.650;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.97;ReadPosRankSum=-0.451;SOR=0.324 GT:AD:DP:GQ:PL 0/1:24,20:44:99:599,0,836 chr2 169198745 . T C 933.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.835;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=2.044;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.94;ReadPosRankSum=3.016;SOR=0.434 GT:AD:DP:GQ:PL 0/1:31,36:67:99:962,0,854 chr2 169201987 . G A 319.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.965;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.90;ReadPosRankSum=1.294;SOR=0.481 GT:AD:DP:GQ:PL 0/1:13,10:23:99:348,0,460 chr2 169202680 . T C 640.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.106;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=2.672;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.17;ReadPosRankSum=-0.850;SOR=1.270 GT:AD:DP:GQ:PL 0/1:40,23:63:99:669,0,1198 chr2 169233314 . T C 415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.481;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.04;ReadPosRankSum=-0.195;SOR=0.859 GT:AD:DP:GQ:PL 0/1:28,18:46:99:444,0,726 chr2 169233341 . G A 499.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.721;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=2.519;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.33;ReadPosRankSum=-0.087;SOR=1.150 GT:AD:DP:GQ:PL 0/1:39,21:60:99:528,0,1070 chr2 169235885 . A G 1898.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.110;ClippingRankSum=0.000;DP=155;ExcessHet=3.0103;FS=1.282;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.25;ReadPosRankSum=-1.001;SOR=0.827 GT:AD:DP:GQ:PL 0/1:77,78:155:99:1927,0,1871 chr2 169239508 . G A 402.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.117;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=5.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=-0.176;SOR=0.154 GT:AD:DP:GQ:PL 0/1:16,15:31:99:431,0,473 chr2 169242781 . C T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=-1.465;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,112 chr2 169242936 . T G 926.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.326;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.41;ReadPosRankSum=0.554;SOR=0.691 GT:AD:DP:GQ:PL 0/1:50,39:89:99:955,0,1272 chr2 169242963 . T C 1112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.838;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.97;ReadPosRankSum=-0.027;SOR=0.730 GT:AD:DP:GQ:PL 0/1:46,47:93:99:1141,0,1268 chr2 169243385 . A C 718.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.032;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.197;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.56;ReadPosRankSum=0.394;SOR=0.481 GT:AD:DP:GQ:PL 0/1:35,18:53:99:747,0,2001 chr2 169243389 . G A 718.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.478;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=1.155;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.61;ReadPosRankSum=-0.361;SOR=0.460 GT:AD:DP:GQ:PL 0/1:36,21:57:99:747,0,2001 chr2 169246826 . T C 2834.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.772;ClippingRankSum=0.000;DP=202;ExcessHet=3.0103;FS=1.101;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.10;ReadPosRankSum=-2.586;SOR=0.812 GT:AD:DP:GQ:PL 0/1:95,106:201:99:2863,0,2603 chr2 169246841 . G T 2695.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.267;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=1.127;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.75;ReadPosRankSum=-1.129;SOR=0.817 GT:AD:DP:GQ:PL 0/1:97,99:196:99:2724,0,2495 chr2 169259078 . T C 1243.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.189;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=1.536;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.31;ReadPosRankSum=-1.564;SOR=0.519 GT:AD:DP:GQ:PL 0/1:59,51:110:99:1272,0,1531 chr2 169273018 . G A 3221.77 PASS AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.28;SOR=0.973 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3250,309,0 chr2 169273126 . A G 996.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.23;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1025,90,0 chr2 169277681 . G C 775.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.65;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,21:21:63:804,63,0 chr2 169279232 . C T 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.18;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr2 169280680 . A G 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.80;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 169282670 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 169282836 . C T 1764.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.94;SOR=2.049 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1793,156,0 chr2 169283129 . A G 905.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.55;SOR=4.091 GT:AD:DP:GQ:PL 1/1:0,24:24:72:934,72,0 chr2 169288916 . G A 1280.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.32;SOR=2.964 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1309,105,0 chr2 169291213 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.66;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 169294161 . G A 1731.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.92;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1760,168,0 chr2 169301946 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 169362154 . G C 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=1.068;SOR=0.086 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,142 chr2 169362306 . T C 1346.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.32;SOR=1.493 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1375,114,0 chr2 169362337 . C G 1525.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.91;SOR=1.414 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1554,135,0 chr2 169381857 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 169425351 . A G 59.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr2 169462032 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 169473207 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 169479514 . G C 11306.77 PASS AC=2;AF=1.00;AN=2;DP=351;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.31;SOR=1.096 GT:AD:DP:GQ:PL 1/1:0,350:350:99:11335,1050,0 chr2 169479776 . G A 2398.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.13;SOR=4.548 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2427,186,0 chr2 169492795 . A G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.90;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 169504905 . A G 655.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=56.33;QD=32.41;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:54:684,54,0 chr2 169504916 . T C 703.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.27;QD=29.10;SOR=1.127 GT:AD:DP:GQ:PL 1/1:0,20:20:60:732,60,0 chr2 169514989 . T A 451.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.27;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:480,42,0 chr2 169518587 . G C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 169538366 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 169546035 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 169546520 . T C 2292.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.832;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=33.23;ReadPosRankSum=-0.900;SOR=0.917 GT:AD:DP:GQ:PL 1/1:2,67:69:99:2321,158,0 chr2 169546596 . G A 1801.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.00;SOR=1.654 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1830,159,0 chr2 169546919 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 169555183 . T C 636.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.84;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,20:20:60:665,60,0 chr2 169568860 . A C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 169584491 . G A 10942.77 PASS AC=2;AF=1.00;AN=2;DP=347;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.54;SOR=0.971 GT:AD:DP:GQ:PL 1/1:0,347:347:99:10971,1040,0 chr2 169587511 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 169607037 . T C 4992.77 PASS AC=2;AF=1.00;AN=2;DP=156;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.00;SOR=1.261 GT:AD:DP:GQ:PL 1/1:0,156:156:99:5021,467,0 chr2 169623429 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 169630644 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 169631944 . A G 2058.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.75;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2087,183,0 chr2 169632117 . A C 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr2 169636057 . A G 1151.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.85;SOR=3.477 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1180,93,0 chr2 169636074 . T C 1683.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.00;SOR=3.516 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1712,135,0 chr2 169648017 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 169660993 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 169661481 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 169694446 . A C 4104.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.40;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,103:103:99:4133,310,0 chr2 169697020 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 169749471 . C T 3501.77 PASS AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.67;SOR=1.848 GT:AD:DP:GQ:PL 1/1:0,104:104:99:3530,312,0 chr2 169749940 . C T 1629.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.89;QD=33.11;SOR=1.885 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1658,111,0 chr2 169750214 . A G 227.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.31;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:27:256,27,0 chr2 169767112 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 169767711 . C T 392.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.73;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,12:12:36:421,36,0 chr2 169774711 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 169776297 . C T 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.76;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 169776386 . T C 1529.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=38.72;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1558,129,0 chr2 169777940 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 169783443 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 169807290 . C G 167.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.58;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:196,15,0 chr2 169807538 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 169808598 . G A 1052.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.04;SOR=5.211 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1081,81,0 chr2 169811596 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.43;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 169812303 . C T 1279.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.31;SOR=6.994 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1308,96,0 chr2 169813653 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 169813673 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 169819717 . T C 436.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.08;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,12:12:36:465,36,0 chr2 169820982 . A G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.94;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 169824241 . A G 651.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.94;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,18:18:54:680,54,0 chr2 169824369 . G A 3251.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.52;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3280,290,0 chr2 169824977 . G A 93.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0 chr2 169838724 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 169877357 . A G 344.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.48;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:373,30,0 chr2 169888295 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 169902637 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.34;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 169902656 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.98;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 169905977 . C T 1575.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.98;SOR=3.716 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1604,125,0 chr2 169918573 . G T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 169925527 . C T 1279.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.67;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1308,102,0 chr2 169927259 . G C 3441.77 PASS AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.09;SOR=2.258 GT:AD:DP:GQ:PL 1/1:0,104:104:99:3470,311,0 chr2 169986959 . T C 178.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.62;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:207,15,0 chr2 169994228 . T C 1695.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.42;SOR=4.664 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1724,129,0 chr2 170023902 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 170061034 . T A 550.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.50;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:579,42,0 chr2 170068297 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 170109222 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 170176231 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 170178516 . C A 269.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.72;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:298,24,0 chr2 170214300 . G T 1832.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.32;SOR=2.345 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1861,165,0 chr2 170214859 . C T 5737.77 PASS AC=2;AF=1.00;AN=2;DP=174;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=1.809 GT:AD:DP:GQ:PL 1/1:0,174:174:99:5766,522,0 chr2 170217498 . G C 2007.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.91;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2036,183,0 chr2 170228127 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 170228163 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 170235533 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 170235570 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 170235575 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 170235853 . G A 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.77;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr2 170235935 . A G 2154.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.92;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,55:55:99:2183,165,0 chr2 170272335 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 170288104 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 170335574 . G A 2380.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=1.745 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2409,213,0 chr2 170342559 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 170383050 . A G 434.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.839;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=2.235;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=0.876;SOR=1.730 GT:AD:DP:GQ:PL 0/1:15,14:29:99:463,0,467 chr2 170383514 . T C 236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.426;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.78;ReadPosRankSum=-0.736;SOR=2.030 GT:AD:DP:GQ:PL 0/1:7,8:15:99:265,0,201 chr2 170383739 . C T 1342.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.241;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=1.772;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.43;ReadPosRankSum=-0.277;SOR=0.463 GT:AD:DP:GQ:PL 0/1:39,48:87:99:1371,0,1043 chr2 170384040 . T A 270.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.15;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:299,21,0 chr2 170384046 . C T 65.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.15;ReadPosRankSum=-0.253;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:94,0,68 chr2 170386323 . A G 1170.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.639;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.95;ReadPosRankSum=-0.332;SOR=0.750 GT:AD:DP:GQ:PL 0/1:55,43:98:99:1199,0,1628 chr2 170400087 . A C 714.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.906;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=1.328;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.93;ReadPosRankSum=0.148;SOR=0.372 GT:AD:DP:GQ:PL 0/1:45,27:72:99:743,0,1475 chr2 170401177 . T C 480.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.688;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=3.565;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.23;ReadPosRankSum=0.622;SOR=2.133 GT:AD:DP:GQ:PL 0/1:11,14:25:99:509,0,349 chr2 170401995 . C T 652.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.592;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=1.003;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.46;ReadPosRankSum=0.088;SOR=0.520 GT:AD:DP:GQ:PL 0/1:45,24:69:99:681,0,1298 chr2 170402079 . G C 468.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.061;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.72;ReadPosRankSum=0.900;SOR=0.588 GT:AD:DP:GQ:PL 0/1:55,27:82:99:497,0,1421 chr2 170402253 . A G 133.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:161,12,0 chr2 170402798 . T G 490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.033;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=1.342;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.91;ReadPosRankSum=-0.238;SOR=0.446 GT:AD:DP:GQ:PL 0/1:18,20:38:99:519,0,456 chr2 170404198 . C A 966.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.990;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=1.022;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.94;ReadPosRankSum=0.820;SOR=0.500 GT:AD:DP:GQ:PL 0/1:44,37:81:99:995,0,1304 chr2 170404277 . G A 2672.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.607;ClippingRankSum=0.000;DP=174;ExcessHet=3.0103;FS=3.834;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.36;ReadPosRankSum=0.042;SOR=1.038 GT:AD:DP:GQ:PL 0/1:101,73:174:99:2701,0,4434 chr2 170404287 . A G 2804.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.177;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.67;ReadPosRankSum=-0.816;SOR=0.703 GT:AD:DP:GQ:PL 0/1:100,79:179:99:2833,0,4403 chr2 170404310 . T C 2463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.137;ClippingRankSum=0.000;DP=212;ExcessHet=3.0103;FS=0.518;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.62;ReadPosRankSum=-0.260;SOR=0.756 GT:AD:DP:GQ:PL 0/1:118,94:212:99:2492,0,3259 chr2 170404511 . T G 2807.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.43;SOR=2.359 GT:AD:DP:GQ:PL 1/1:0,84:84:99:2836,252,0 chr2 170405911 . C T 270.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.85;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:299,24,0 chr2 170407669 . C T 859.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.011;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.96;ReadPosRankSum=0.235;SOR=0.716 GT:AD:DP:GQ:PL 0/1:57,39:96:99:888,0,1548 chr2 170407972 . G C 482.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.21;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:511,39,0 chr2 170423242 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 170463487 . A C 2266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.144;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=1.265;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.26;ReadPosRankSum=0.342;SOR=0.812 GT:AD:DP:GQ:PL 0/1:73,86:159:99:2295,0,1750 chr2 170466818 . T C 352.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.109;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=8.505;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.08;ReadPosRankSum=-1.338;SOR=0.056 GT:AD:DP:GQ:PL 0/1:20,15:35:99:381,0,655 chr2 170466906 . A C 123.79 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=1.282;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:22:152,0,22 chr2 170497590 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 170498688 . A G 3909.77 PASS AC=2;AF=1.00;AN=2;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.86;SOR=1.104 GT:AD:DP:GQ:PL 1/1:0,119:119:99:3938,357,0 chr2 170498819 . G C 4703.77 PASS AC=2;AF=1.00;AN=2;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.74;SOR=1.036 GT:AD:DP:GQ:PL 1/1:0,153:153:99:4732,459,0 chr2 170498916 . T C 2836.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.59;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2865,246,0 chr2 170499019 . C T 502.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.58;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:531,39,0 chr2 170499764 . G A 6038.77 PASS AC=2;AF=1.00;AN=2;DP=204;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.60;SOR=1.134 GT:AD:DP:GQ:PL 1/1:0,204:204:99:6067,610,0 chr2 170499913 . T C 609.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.02;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:638,48,0 chr2 170499982 . C G 95.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:123,9,0 chr2 170501534 . G A 1479.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.36;SOR=3.556 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1508,117,0 chr2 170501701 . G A 3291.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.65;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3320,285,0 chr2 170501964 . T A 712.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.94;SOR=2.636 GT:AD:DP:GQ:PL 1/1:0,21:21:63:741,63,0 chr2 170628351 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 170651752 . G A 2511.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.21;SOR=1.005 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2540,256,0 chr2 170652895 . G C 378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.112;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.94;ReadPosRankSum=0.524;SOR=0.368 GT:AD:DP:GQ:PL 0/1:8,12:20:99:407,0,273 chr2 170669966 . G T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:70:81,0,70 chr2 170687270 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 170713978 . C G 1690.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.75;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1719,126,0 chr2 170716430 . G A 5029.77 PASS AC=2;AF=1.00;AN=2;DP=152;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.09;SOR=1.721 GT:AD:DP:GQ:PL 1/1:0,152:152:99:5058,456,0 chr2 170717707 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 170771166 . T G 2843.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.91;SOR=0.982 GT:AD:DP:GQ:PL 1/1:0,92:92:99:2872,276,0 chr2 170775715 . C T 2640.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=1.339 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2669,243,0 chr2 170775891 . C T 2282.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.51;SOR=0.900 GT:AD:DP:GQ:PL 1/1:0,51:51:99:2311,160,0 chr2 170792892 . C T 1336.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.06;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1365,138,0 chr2 170796529 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 170796745 . G A 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr2 170798153 . A C 1459.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.95;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1488,129,0 chr2 170798263 . G C 262.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.68;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:291,21,0 chr2 170809199 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 170813500 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 170815865 . C T 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=-0.792;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,78 chr2 170815885 . C G 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=0.566;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,78 chr2 170816113 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:36:81,0,36 chr2 170816117 . C A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-0.967;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:36:81,0,36 chr2 170816134 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 170818871 . A G 282.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.550;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.85;ReadPosRankSum=0.550;SOR=2.494 GT:AD:DP:GQ:PL 0/1:6,9:15:99:311,0,171 chr2 170821869 . C T 673.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.976;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.42;ReadPosRankSum=-1.572;SOR=0.668 GT:AD:DP:GQ:PL 0/1:13,20:33:99:702,0,398 chr2 170822115 . T C 2510.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.232;ClippingRankSum=0.000;DP=210;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.01;ReadPosRankSum=0.519;SOR=0.680 GT:AD:DP:GQ:PL 0/1:112,97:209:99:2539,0,2846 chr2 170874080 . C T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 170884566 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 170893409 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 170929659 . A G 1285.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.60;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1314,102,0 chr2 170961779 . G A 2968.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.92;SOR=1.511 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2997,279,0 chr2 170965956 . C T 8793.77 PASS AC=2;AF=1.00;AN=2;DP=302;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.12;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,302:302:99:8822,890,0 chr2 170998093 . C T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:33:113,0,33 chr2 170998164 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 171040932 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 171050526 . T C 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr2 171056401 . A T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.73;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 171059861 . C T 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.86;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr2 171060154 . A T 895.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.82;SOR=4.091 GT:AD:DP:GQ:PL 1/1:0,24:24:72:924,72,0 chr2 171183132 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 171201163 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 171277866 . C T 374.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.292;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.62;ReadPosRankSum=0.552;SOR=0.914 GT:AD:DP:GQ:PL 0/1:11,13:24:99:403,0,341 chr2 171323470 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 171435106 . C T 1793.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.03;SOR=1.781 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1822,168,0 chr2 171447675 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.40;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 171447686 . G A 132.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:160,12,0 chr2 171448582 . T C 335.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.20;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:364,27,0 chr2 171448667 . C T 1227.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.43;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1256,93,0 chr2 171452996 . T A 1315.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=5.610 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1344,99,0 chr2 171457744 . G A 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.35;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 171458701 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 171468630 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.30;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 171468652 . C T 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.52;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr2 171472692 . T C 94.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:122,9,0 chr2 171472948 . G T 1753.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.73;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1782,156,0 chr2 171473883 . A G 972.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.48;SOR=1.352 GT:AD:DP:GQ:PL 1/1:0,33:33:98:1001,98,0 chr2 171476785 . C T 1956.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.22;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1985,165,0 chr2 171477142 . C A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 171480031 . C T 1472.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.47;SOR=2.636 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1501,131,0 chr2 171491885 . A G 685.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.17;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:66:714,66,0 chr2 171510013 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 171517490 . T G 221.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=53.49;QD=32.70;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:250,18,0 chr2 171517978 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 171517985 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 171522308 . A G 1915.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.291;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=2.108;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.77;ReadPosRankSum=1.440;SOR=0.512 GT:AD:DP:GQ:PL 0/1:72,78:150:99:1944,0,1882 chr2 171522379 . C G 1554.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.168;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=20.956;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.59;ReadPosRankSum=-1.496;SOR=0.037 GT:AD:DP:GQ:PL 0/1:32,40:72:99:1583,0,1877 chr2 171522383 . G A 1587.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.259;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=23.467;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.75;ReadPosRankSum=-1.753;SOR=0.032 GT:AD:DP:GQ:PL 0/1:32,41:73:99:1616,0,1874 chr2 171523176 . G A 1971.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.116;ClippingRankSum=0.000;DP=143;ExcessHet=3.0103;FS=1.434;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.79;ReadPosRankSum=0.514;SOR=0.535 GT:AD:DP:GQ:PL 0/1:68,75:143:99:2000,0,1990 chr2 171523271 . G A 2956.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.494;ClippingRankSum=0.000;DP=258;ExcessHet=3.0103;FS=6.742;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.46;ReadPosRankSum=-0.261;SOR=0.649 GT:AD:DP:GQ:PL 0/1:139,119:258:99:2985,0,3684 chr2 171523426 . G A 843.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.187;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=3.268;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.88;ReadPosRankSum=-0.167;SOR=0.393 GT:AD:DP:GQ:PL 0/1:64,31:95:99:872,0,1969 chr2 171523636 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 171526235 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 171541801 . T C 635.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.545;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=4.743;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.42;ReadPosRankSum=-0.283;SOR=1.603 GT:AD:DP:GQ:PL 0/1:38,23:61:99:664,0,1177 chr2 171553211 . C T 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.967;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr2 171554364 . C T 293.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:322,24,0 chr2 171554763 . G A 1019.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.449;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=2.301;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.60;ReadPosRankSum=0.191;SOR=0.425 GT:AD:DP:GQ:PL 0/1:36,39:75:99:1048,0,1074 chr2 171560415 . C T 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr2 171560482 . C G 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.981;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=-0.712;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:28:188,0,28 chr2 171619310 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 171627092 . A C 307.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.938;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=1.740;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.66;ReadPosRankSum=-1.814;SOR=0.905 GT:AD:DP:GQ:PL 0/1:9,12:21:99:336,0,267 chr2 171627116 . A G 803.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.91;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:66:832,66,0 chr2 171627164 . A G 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.241;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=1.138;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,8:15:99:221,0,179 chr2 171627219 . C T 69.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=0.732;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:98:98,0,211 chr2 171627274 . C A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 171637148 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 171655415 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 171685099 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 171686195 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 171689541 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 171692738 . A G 846.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.14;SOR=6.273 GT:AD:DP:GQ:PL 1/1:0,22:22:66:875,66,0 chr2 171693120 . T A 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 171922612 . C T 4103.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.20;SOR=2.264 GT:AD:DP:GQ:PL 1/1:0,120:120:99:4132,360,0 chr2 171940061 . C T 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr2 171965218 . T G 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.92;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 171976274 . T C 2106.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=2.104;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=3.241;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.92;ReadPosRankSum=-0.706;SOR=2.093 GT:AD:DP:GQ:PL 1/1:2,64:66:99:2135,163,0 chr2 171979046 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 171983081 . G T 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.88;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 172011475 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 172036983 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 172063716 . A G 1331.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.663;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=0.781;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.56;ReadPosRankSum=-0.382;SOR=0.541 GT:AD:DP:GQ:PL 0/1:53,53:106:99:1360,0,1502 chr2 172078592 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 172085344 . T C 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.30;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 172085345 . A T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.12;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 172087804 . A C 1447.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.66;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1476,111,0 chr2 172097219 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 172099910 . C A 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr2 172102574 . C T 405.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.711;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=1.232;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.22;ReadPosRankSum=0.054;SOR=1.061 GT:AD:DP:GQ:PL 0/1:28,16:44:99:434,0,731 chr2 172146809 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 172213771 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 172213903 . T A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 172294132 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 172296651 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 172299453 . C T 65.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:93,9,0 chr2 172299556 . G A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 172299631 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 172310483 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 172315268 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.70;QD=34.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 172315270 . C G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.70;QD=30.04;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 172315306 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.70;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 172330001 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 172330234 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 172335622 . T A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 172427651 . G A 455.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.053;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=2.527;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.66;ReadPosRankSum=0.156;SOR=0.180 GT:AD:DP:GQ:PL 0/1:21,15:36:99:484,0,723 chr2 172427981 . A G 13624.77 PASS AC=2;AF=1.00;AN=2;DP=309;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.93;SOR=1.404 GT:AD:DP:GQ:PL 1/1:0,309:309:99:13653,930,0 chr2 172427985 . C T 13349.77 PASS AC=2;AF=1.00;AN=2;DP=295;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.69;SOR=1.515 GT:AD:DP:GQ:PL 1/1:0,295:295:99:13378,906,0 chr2 172428000 . T C 8437.77 PASS AC=2;AF=1.00;AN=2;DP=251;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.62;SOR=1.797 GT:AD:DP:GQ:PL 1/1:0,251:251:99:8466,753,0 chr2 172428157 . C T 782.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.06;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:811,60,0 chr2 172438663 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 172458277 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 172458384 . T C 170.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.47;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:199,18,0 chr2 172465237 . T A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.00;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 172465821 . T G 469.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.797;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=3.035;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=-2.141;SOR=1.270 GT:AD:DP:GQ:PL 0/1:21,18:39:99:498,0,555 chr2 172467387 . G A 5903.77 PASS AC=2;AF=1.00;AN=2;DP=182;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.44;SOR=1.828 GT:AD:DP:GQ:PL 1/1:0,182:182:99:5932,543,0 chr2 172467978 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 172467997 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 172472064 . A G 151.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.31;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:180,18,0 chr2 172472767 . C T 4748.77 PASS AC=2;AF=1.00;AN=2;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.92;SOR=1.772 GT:AD:DP:GQ:PL 1/1:0,136:136:99:4777,409,0 chr2 172472953 . G T 1171.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.462;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.46;ReadPosRankSum=0.375;SOR=0.760 GT:AD:DP:GQ:PL 0/1:67,45:112:99:1200,0,1899 chr2 172475470 . A C 182.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.31;ReadPosRankSum=1.275;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:99:211,0,147 chr2 172475481 . A C 217.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.623;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.52;ReadPosRankSum=-1.926;SOR=0.818 GT:AD:DP:GQ:PL 0/1:7,8:15:99:246,0,267 chr2 172479400 . G A 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.566;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr2 172479746 . A G 1359.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.447;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=2.827;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.45;ReadPosRankSum=0.163;SOR=0.516 GT:AD:DP:GQ:PL 0/1:37,51:88:99:1388,0,1030 chr2 172479952 . A C 1535.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.763;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.59;ReadPosRankSum=-1.876;SOR=0.754 GT:AD:DP:GQ:PL 0/1:60,62:122:99:1564,0,1434 chr2 172487375 . C T 1046.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.520;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=1.619;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.78;ReadPosRankSum=0.342;SOR=0.870 GT:AD:DP:GQ:PL 0/1:67,40:107:99:1075,0,2070 chr2 172487429 . A T 2216.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.642;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=2.328;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.32;ReadPosRankSum=1.207;SOR=0.477 GT:AD:DP:GQ:PL 0/1:52,76:128:99:2245,0,1446 chr2 172488096 . C T 1558.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.523;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=2.378;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=-0.534;SOR=0.495 GT:AD:DP:GQ:PL 0/1:55,61:116:99:1587,0,1525 chr2 172488332 . G A 1106.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.05;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1135,84,0 chr2 172491179 . A C 2643.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.535;ClippingRankSum=0.000;DP=196;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.56;ReadPosRankSum=-0.865;SOR=0.722 GT:AD:DP:GQ:PL 0/1:94,101:195:99:2672,0,2507 chr2 172502141 . C T 83.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.94;ReadPosRankSum=-1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:112,0,30 chr2 172504503 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 172510134 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 172537175 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 172547623 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 172555077 . A G 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=1.282;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:25:84,0,25 chr2 172556521 . C T 432.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.789;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.82;ReadPosRankSum=-1.325;SOR=0.299 GT:AD:DP:GQ:PL 0/1:10,13:23:99:461,0,348 chr2 172564146 . C T 2272.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.525;ClippingRankSum=0.000;DP=211;ExcessHet=3.0103;FS=3.184;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.87;ReadPosRankSum=1.336;SOR=0.506 GT:AD:DP:GQ:PL 0/1:116,93:209:99:2301,0,4527 chr2 172586028 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 172596075 . A G 745.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.660;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.95;ReadPosRankSum=0.493;SOR=0.815 GT:AD:DP:GQ:PL 0/1:17,27:44:99:774,0,476 chr2 172664090 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 172673292 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 172735091 . G A 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr2 172735207 . T G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 172795185 . T C 935.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.95;SOR=4.091 GT:AD:DP:GQ:PL 1/1:0,24:24:72:964,72,0 chr2 172797626 . A G 705.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.702;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=5.651;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.03;ReadPosRankSum=0.000;SOR=0.230 GT:AD:DP:GQ:PL 0/1:35,29:64:99:734,0,1049 chr2 172814643 . C G 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=-0.120;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,137 chr2 172821935 . G T 1732.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.538;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=5.529;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.64;ReadPosRankSum=-0.978;SOR=1.221 GT:AD:DP:GQ:PL 0/1:66,61:127:99:1761,0,1888 chr2 172822070 . A G 1341.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.588;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=2.454;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.98;ReadPosRankSum=-0.840;SOR=0.548 GT:AD:DP:GQ:PL 0/1:63,49:112:99:1370,0,1565 chr2 172870440 . G T 40.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:68,6,0 chr2 172870452 . G C 40.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:68,6,0 chr2 172927897 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 172928374 . C T 331.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.95;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:360,24,0 chr2 172983117 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 172996612 . G A 1346.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.93;SOR=0.737 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1375,135,0 chr2 172996722 . A T 667.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.74;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,16:16:48:696,48,0 chr2 172996728 . G C 601.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.72;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:630,42,0 chr2 173001475 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 173014806 . C A 787.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,22:22:66:816,66,0 chr2 173024469 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 173024605 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 173121600 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 173203785 . G C 2941.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.97;SOR=1.420 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2970,284,0 chr2 173217372 . C G 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.69;ReadPosRankSum=-1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:59:59,0,72 chr2 173221013 . A G 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.765;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.86;ReadPosRankSum=0.712;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:108,0,181 chr2 173221557 . C T 1044.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.585;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=1.177;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.31;ReadPosRankSum=-0.306;SOR=0.465 GT:AD:DP:GQ:PL 0/1:38,35:73:99:1073,0,1119 chr2 173229401 . G C 526.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.899;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=9.074;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.86;ReadPosRankSum=1.577;SOR=3.045 GT:AD:DP:GQ:PL 0/1:22,16:38:99:555,0,636 chr2 173229617 . A T 847.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.464;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=3.172;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.09;ReadPosRankSum=0.318;SOR=1.096 GT:AD:DP:GQ:PL 0/1:52,32:84:99:876,0,1540 chr2 173232378 . A G 1271.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.226;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=1.489;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.711;SOR=0.555 GT:AD:DP:GQ:PL 0/1:72,47:119:99:1300,0,1898 chr2 173238432 . T C 984.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.166;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=1.814;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=1.172;SOR=0.977 GT:AD:DP:GQ:PL 0/1:43,40:83:99:1013,0,1121 chr2 173238638 . T C 218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.111;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=-1.769;SOR=2.546 GT:AD:DP:GQ:PL 0/1:8,7:15:99:247,0,255 chr2 173238700 . C A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.674;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr2 173239630 . T C 570.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.235;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=1.715;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.85;ReadPosRankSum=1.239;SOR=0.314 GT:AD:DP:GQ:PL 0/1:15,21:36:99:599,0,450 chr2 173258671 . A G 519.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.329;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.24;ReadPosRankSum=0.000;SOR=0.249 GT:AD:DP:GQ:PL 0/1:15,17:32:99:548,0,486 chr2 173263867 . T C 1145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.398;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=4.542;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.05;ReadPosRankSum=0.119;SOR=0.929 GT:AD:DP:GQ:PL 0/1:63,51:114:99:1174,0,1765 chr2 173264077 . A G 272.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.80;ReadPosRankSum=1.264;SOR=1.802 GT:AD:DP:GQ:PL 0/1:3,8:11:90:301,0,90 chr2 173266664 . T C 1651.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.005;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=1.493;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.76;ReadPosRankSum=0.815;SOR=0.859 GT:AD:DP:GQ:PL 0/1:61,59:120:99:1680,0,1554 chr2 173281053 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 173291773 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 173291780 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 173301200 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 173359627 . G A 991.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.56;SOR=6.518 GT:AD:DP:GQ:PL 1/1:0,25:25:75:1020,75,0 chr2 173363690 . C T 179.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.32;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:208,15,0 chr2 173363768 . C T 404.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.196;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=2.395;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.87;ReadPosRankSum=-0.035;SOR=1.569 GT:AD:DP:GQ:PL 0/1:11,13:24:99:433,0,319 chr2 173364016 . T C 875.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.68;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,26:26:78:904,78,0 chr2 173365425 . C G 3403.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.94;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3432,329,0 chr2 173367894 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 173444667 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 173453216 . A G 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr2 173462349 . C G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 173477583 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 173478207 . C T 185.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.391;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.363;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.38;ReadPosRankSum=-0.573;SOR=0.148 GT:AD:DP:GQ:PL 0/1:6,9:15:99:214,0,206 chr2 173478332 . G T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.674;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 173533352 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 173575734 . T A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 173612548 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 173620670 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 173660379 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 173854484 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 173857306 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 173857443 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 173860916 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 173860927 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 173860945 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 173896883 . G T 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=0.000;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,5:7:28:120,0,28 chr2 173956022 . T C 827.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.858;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=0.757;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.88;ReadPosRankSum=1.530;SOR=0.850 GT:AD:DP:GQ:PL 0/1:66,39:105:99:856,0,1765 chr2 174016144 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 174016145 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 174042915 . C A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 174079148 . C T 162.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.140;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=1.833;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=0.227;SOR=1.230 GT:AD:DP:GQ:PL 0/1:13,8:21:99:191,0,310 chr2 174082257 . T C 264.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.06;ReadPosRankSum=0.338;SOR=1.445 GT:AD:DP:GQ:PL 0/1:4,8:12:99:293,0,119 chr2 174123066 . A G 892.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.977;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.53;ReadPosRankSum=0.776;SOR=0.825 GT:AD:DP:GQ:PL 0/1:33,33:66:99:921,0,781 chr2 174224441 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 174262122 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 174306238 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 174310194 . T C 579.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=55.48;QD=27.61;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:62:608,62,0 chr2 174327376 . G A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 174335399 . A C 691.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.79;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:720,54,0 chr2 174336571 . C G 3279.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.81;SOR=1.099 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3308,291,0 chr2 174342302 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 174369762 . C A 595.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.20;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:624,45,0 chr2 174380028 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 174395627 . G T 4539.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.079;ClippingRankSum=0.000;DP=346;ExcessHet=3.0103;FS=5.045;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.12;ReadPosRankSum=-0.366;SOR=0.475 GT:AD:DP:GQ:PL 0/1:173,173:346:99:4568,0,4725 chr2 174398490 . A G 2281.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.55;SOR=2.948 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2310,183,0 chr2 174400817 . T C 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.000;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr2 174400884 . T G 383.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.121;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.71;ReadPosRankSum=-0.515;SOR=1.292 GT:AD:DP:GQ:PL 0/1:16,12:28:99:412,0,494 chr2 174412962 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 174442076 . C G 1316.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.35;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1345,126,0 chr2 174445301 . C G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 174446466 . T A 293.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.33;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:322,24,0 chr2 174453862 . G T 3882.77 PASS AC=2;AF=1.00;AN=2;DP=106;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.77;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,106:106:99:3911,318,0 chr2 174468698 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 174470348 . G T 1246.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.11;SOR=4.112 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1275,99,0 chr2 174487330 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 174504408 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 174504456 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 174517836 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 174518452 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 174542336 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 174542704 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 174566979 . C G 760.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.851;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=1.161;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.59;ReadPosRankSum=1.809;SOR=0.468 GT:AD:DP:GQ:PL 0/1:29,27:56:99:789,0,805 chr2 174567370 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:40:72,0,40 chr2 174572212 . G A 8456.77 PASS AC=2;AF=1.00;AN=2;DP=262;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.28;SOR=0.910 GT:AD:DP:GQ:PL 1/1:0,262:262:99:8485,787,0 chr2 174574784 . T C 1981.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.96;SOR=1.647 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2010,186,0 chr2 174574808 . G A 843.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.940;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=2.006;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=-0.086;SOR=1.066 GT:AD:DP:GQ:PL 0/1:41,33:74:99:872,0,981 chr2 174575588 . G A 60.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.887;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.60;ReadPosRankSum=-0.319;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:89:89,0,185 chr2 174603182 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 174689853 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 174719781 . G A 63.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.660;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.80;ReadPosRankSum=-0.699;SOR=0.180 GT:AD:DP:GQ:PL 0/1:8,3:11:92:92,0,277 chr2 174748331 . A C 588.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.339;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=9.559;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.08;ReadPosRankSum=0.175;SOR=2.194 GT:AD:DP:GQ:PL 0/1:27,18:45:99:617,0,858 chr2 174748387 . G A 1674.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.18;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1703,146,0 chr2 174748441 . A C 1614.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.387;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=5.335;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.55;ReadPosRankSum=0.242;SOR=0.255 GT:AD:DP:GQ:PL 0/1:43,49:92:99:1643,0,1382 chr2 174748872 . T C 981.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.62;SOR=5.058 GT:AD:DP:GQ:PL 1/1:0,25:25:75:1010,75,0 chr2 174752285 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 174757118 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 174758060 . G A 2146.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.53;SOR=1.574 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2175,198,0 chr2 174758179 . T C 513.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.01;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:542,39,0 chr2 174759869 . G A 301.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:330,27,0 chr2 174764119 . T C 814.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.19;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,21:21:63:843,63,0 chr2 174764293 . C A 2171.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.768;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=8.217;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.83;ReadPosRankSum=0.143;SOR=1.264 GT:AD:DP:GQ:PL 0/1:76,81:157:99:2200,0,1892 chr2 174801928 . G A 263.80 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.74;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 174847214 . C T 795.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.94;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,22:22:66:824,66,0 chr2 174885038 . A T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.126;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 174931982 . C T 64.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.201;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.40;ReadPosRankSum=-1.290;SOR=0.760 GT:AD:DP:GQ:PL 0/1:7,5:12:93:93,0,188 chr2 174952334 . C T 191.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.18;ReadPosRankSum=0.573;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:220,0,137 chr2 175004667 . G A 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.69;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:59:59,0,72 chr2 175113867 . A C 319.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.843;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.83;ReadPosRankSum=0.172;SOR=0.793 GT:AD:DP:GQ:PL 0/1:9,10:19:99:348,0,319 chr2 175127346 . T C 76.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.812;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.40;ReadPosRankSum=0.549;SOR=0.883 GT:AD:DP:GQ:PL 0/1:7,5:12:99:105,0,137 chr2 175130239 . A C 755.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.129;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.60;ReadPosRankSum=0.068;SOR=0.793 GT:AD:DP:GQ:PL 0/1:29,31:60:99:784,0,724 chr2 175178890 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 175179408 . A T 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=0.000;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr2 175179732 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 175181104 . C A 2686.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.67;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2715,210,0 chr2 175181439 . C A 2487.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.818;ClippingRankSum=0.000;DP=156;ExcessHet=3.0103;FS=10.498;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.05;ReadPosRankSum=0.548;SOR=1.661 GT:AD:DP:GQ:PL 0/1:77,78:155:99:2516,0,2320 chr2 175181529 . C T 1225.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.66;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1254,93,0 chr2 175181680 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:75:76,0,75 chr2 175181687 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.842;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,120 chr2 175181927 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 175257539 . A C 195.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.97;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:224,21,0 chr2 175257664 . C T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.126;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr2 175257694 . G A 101.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:129,9,0 chr2 175325531 . T C 1058.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.21;QD=30.25;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1087,105,0 chr2 175431151 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 175594963 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 175708895 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 175843077 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 175937136 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 176002220 . G A 876.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.490;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=5.293;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.61;ReadPosRankSum=1.057;SOR=1.473 GT:AD:DP:GQ:PL 0/1:28,32:60:99:905,0,684 chr2 176002403 . G A 178.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.076;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.90;ReadPosRankSum=0.000;SOR=1.085 GT:AD:DP:GQ:PL 0/1:5,7:12:99:207,0,134 chr2 176080284 . G A 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.119;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.83;ReadPosRankSum=0.312;SOR=0.446 GT:AD:DP:GQ:PL 0/1:9,4:13:65:65,0,167 chr2 176082509 . C T 4233.77 PASS AC=2;AF=1.00;AN=2;DP=129;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.82;SOR=1.384 GT:AD:DP:GQ:PL 1/1:0,129:129:99:4262,387,0 chr2 176086198 . G A 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr2 176088064 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 176088070 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 176093157 . G A 1818.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.912;ClippingRankSum=0.000;DP=167;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.89;ReadPosRankSum=-0.018;SOR=0.657 GT:AD:DP:GQ:PL 0/1:101,66:167:99:1847,0,3015 chr2 176093973 . A C 168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.314;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.44;ReadPosRankSum=-1.905;SOR=0.569 GT:AD:DP:GQ:PL 0/1:13,7:20:99:197,0,437 chr2 176109376 . G T 77.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.55;ReadPosRankSum=-1.645;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:106,0,68 chr2 176116615 . G T 173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=1.226;SOR=0.340 GT:AD:DP:GQ:PL 0/1:10,6:16:99:202,0,369 chr2 176124295 . C T 142.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.799;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.90;ReadPosRankSum=0.084;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,8:12:69:171,0,69 chr2 176129895 . C T 158.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.47;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:187,18,0 chr2 176131295 . C T 1281.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=2.199;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=3.373;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.52;ReadPosRankSum=-0.829;SOR=2.191 GT:AD:DP:GQ:PL 1/1:2,40:42:45:1310,45,0 chr2 176150242 . G T 2650.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.55;SOR=2.215 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2679,236,0 chr2 176157430 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 176164211 . C A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 176171483 . G A 3721.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.81;SOR=1.417 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3750,351,0 chr2 176172026 . T C 16114.77 PASS AC=2;AF=1.00;AN=2;DP=467;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.58;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,466:466:99:16143,1400,0 chr2 176178143 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 176201094 . G A 469.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.972;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.25;MQRankSum=-0.800;QD=33.55;ReadPosRankSum=0.190;SOR=0.307 GT:AD:DP:GQ:PL 0/1:2,12:14:48:498,0,48 chr2 176201103 . G A 469.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.815;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.25;MQRankSum=-0.800;QD=33.55;ReadPosRankSum=-0.093;SOR=0.307 GT:AD:DP:GQ:PL 0/1:2,12:14:48:498,0,48 chr2 176201109 . T G 466.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.972;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.25;MQRankSum=-0.800;QD=33.34;ReadPosRankSum=-0.185;SOR=0.307 GT:AD:DP:GQ:PL 0/1:2,12:14:90:495,0,90 chr2 176201127 . A G 463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.650;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.01;MQRankSum=-1.195;QD=28.99;ReadPosRankSum=1.640;SOR=0.593 GT:AD:DP:GQ:PL 0/1:4,12:16:99:492,0,132 chr2 176201136 . A G 463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.650;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=57.01;MQRankSum=-1.195;QD=28.99;ReadPosRankSum=1.277;SOR=0.593 GT:AD:DP:GQ:PL 0/1:4,12:16:99:492,0,132 chr2 176201139 . A G 463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.537;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.80;MQRankSum=-1.257;QD=30.92;ReadPosRankSum=1.633;SOR=0.818 GT:AD:DP:GQ:PL 0/1:4,11:15:99:492,0,132 chr2 176201140 . T C 505.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.537;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.80;MQRankSum=-1.257;QD=33.72;ReadPosRankSum=1.570;SOR=0.818 GT:AD:DP:GQ:PL 0/1:4,11:15:99:534,0,129 chr2 176201142 . T G 463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.070;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.88;MQRankSum=-1.401;QD=28.99;ReadPosRankSum=1.032;SOR=0.593 GT:AD:DP:GQ:PL 0/1:4,12:16:99:492,0,132 chr2 176201148 . G A 463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.070;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=56.88;MQRankSum=-1.401;QD=28.99;ReadPosRankSum=0.547;SOR=0.593 GT:AD:DP:GQ:PL 0/1:4,12:16:99:492,0,132 chr2 176201187 . T C 478.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.071;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=4.222;MLEAC=1;MLEAF=0.500;MQ=56.26;MQRankSum=-2.795;QD=19.15;ReadPosRankSum=0.680;SOR=0.184 GT:AD:DP:GQ:PL 0/1:13,12:25:99:507,0,507 chr2 176201196 . A G 550.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.798;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=10.126;MLEAC=1;MLEAF=0.500;MQ=55.71;MQRankSum=-3.483;QD=17.77;ReadPosRankSum=-0.437;SOR=0.056 GT:AD:DP:GQ:PL 0/1:17,14:31:99:579,0,669 chr2 176201208 . A G 451.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.117;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=8.046;MLEAC=1;MLEAF=0.500;MQ=55.69;MQRankSum=-4.378;QD=12.91;ReadPosRankSum=-0.734;SOR=0.389 GT:AD:DP:GQ:PL 0/1:22,13:35:99:480,0,885 chr2 176201217 . C G 274.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.350;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=17.742;MLEAC=1;MLEAF=0.500;MQ=56.45;MQRankSum=-4.807;QD=8.08;ReadPosRankSum=0.703;SOR=1.986 GT:AD:DP:GQ:PL 0/1:25,9:34:99:303,0,1023 chr2 176201229 . G A 265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.268;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=18.502;MLEAC=1;MLEAF=0.500;MQ=56.74;MQRankSum=-5.051;QD=7.18;ReadPosRankSum=0.443;SOR=1.980 GT:AD:DP:GQ:PL 0/1:28,9:37:99:294,0,1149 chr2 176201237 . T C 217.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.109;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=14.081;MLEAC=1;MLEAF=0.500;MQ=56.83;MQRankSum=-5.535;QD=5.73;ReadPosRankSum=0.716;SOR=1.732 GT:AD:DP:GQ:PL 0/1:30,8:38:99:246,0,1236 chr2 176201247 . G A 163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.907;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=11.038;MLEAC=1;MLEAF=0.500;MQ=57.07;MQRankSum=-6.263;QD=3.99;ReadPosRankSum=1.040;SOR=1.434 GT:AD:DP:GQ:PL 0/1:34,7:41:99:192,0,1407 chr2 176201287 . G A 126.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.444;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=10.339;MLEAC=1;MLEAF=0.500;MQ=57.70;MQRankSum=-7.095;QD=2.44;ReadPosRankSum=-0.805;SOR=1.451 GT:AD:DP:GQ:PL 0/1:45,7:52:99:155,0,1910 chr2 176210377 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 176242364 . G C 333.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.313;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=3.821;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.17;ReadPosRankSum=-0.300;SOR=0.490 GT:AD:DP:GQ:PL 0/1:9,13:22:99:362,0,271 chr2 176242545 . T C 937.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.104;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.84;ReadPosRankSum=-0.596;SOR=0.527 GT:AD:DP:GQ:PL 0/1:12,33:45:99:966,0,264 chr2 176242628 . A G 750.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.014;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=4.322;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.32;ReadPosRankSum=0.132;SOR=1.229 GT:AD:DP:GQ:PL 0/1:17,32:49:99:779,0,393 chr2 176303964 . G C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.74;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 176337342 . T C 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr2 176337387 . A G 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.72;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 176450997 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 176451991 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 176473713 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 176473934 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 176537277 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 176556941 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 176601416 . G T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 176632762 . C T 353.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.35;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:382,30,0 chr2 176632886 . A G 1623.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.83;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1652,144,0 chr2 176633023 . G A 2078.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.50;SOR=1.284 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2107,198,0 chr2 176637715 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 176637780 . C A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.32;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 176637792 . G C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.65;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 176637923 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 176696211 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 176696320 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 176696388 . A G 146.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.94;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:174,12,0 chr2 176703518 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 176765880 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 176828268 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 176939974 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 176939983 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 177055159 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.64;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 177055163 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=44.64;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 177079441 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 177094030 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 177094042 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 177197957 . A C 376.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.87;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:27:405,27,0 chr2 177197964 . A C 446.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.19;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:33:475,33,0 chr2 177198019 . G T 661.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.51;SOR=1.828 GT:AD:DP:GQ:PL 1/1:0,21:21:63:690,63,0 chr2 177198172 . G A 1467.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.95;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1496,147,0 chr2 177213267 . A G 155.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.97;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:184,18,0 chr2 177215407 . T C 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=0.414;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr2 177220409 . G A 571.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.99;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,22:22:66:600,66,0 chr2 177265309 . T G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 177265345 . T C 46.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=0.000;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:21:75,0,21 chr2 177291117 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 177313738 . T C 2822.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.02;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2851,273,0 chr2 177412326 . A G 659.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.69;SOR=0.963 GT:AD:DP:GQ:PL 1/1:0,23:23:69:688,69,0 chr2 177436439 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 177436700 . C T 655.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.94;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,18:18:54:684,54,0 chr2 177442602 . C T 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.21;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr2 177462110 . C G 676.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.62;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:705,48,0 chr2 177462119 . G A 601.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.51;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:630,42,0 chr2 177462224 . A G 143.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.78;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:172,15,0 chr2 177466478 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 177493344 . C T 1853.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.33;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1882,162,0 chr2 177493505 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 177497844 . G A 229.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.53;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:27:258,27,0 chr2 177505312 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 177508924 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 177513724 . T A 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr2 177552414 . C T 8257.77 PASS AC=2;AF=1.00;AN=2;DP=227;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.89;SOR=0.915 GT:AD:DP:GQ:PL 1/1:0,227:227:99:8286,682,0 chr2 177552497 . C T 9699.77 PASS AC=2;AF=1.00;AN=2;DP=279;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.22;QD=34.77;SOR=1.360 GT:AD:DP:GQ:PL 1/1:0,279:279:99:9728,836,0 chr2 177594597 . G C 252.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.28;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:30:281,30,0 chr2 177617090 . G T 4618.77 PASS AC=2;AF=1.00;AN=2;DP=144;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=51.26;QD=32.07;SOR=0.809 GT:AD:DP:GQ:PL 1/1:0,144:144:99:4647,432,0 chr2 177629284 . C G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.86;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 177629792 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.08;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 177657691 . C G 89.85 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=14.98;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:17:118,17,0 chr2 177660902 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 177660927 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 177663623 . T C 421.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.33;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:450,30,0 chr2 177663632 . A G 546.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.33;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:575,39,0 chr2 177663975 . C T 3194.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.95;SOR=1.284 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3223,300,0 chr2 177664061 . G A 1413.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.45;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1442,144,0 chr2 177664146 . T C 402.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.56;SOR=2.670 GT:AD:DP:GQ:PL 1/1:0,12:12:36:431,36,0 chr2 177669382 . G T 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.77;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 177669596 . A G 1472.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.06;SOR=1.225 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1501,147,0 chr2 177670195 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 177670214 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 177675295 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 177675565 . A G 1848.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.88;SOR=0.762 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1877,174,0 chr2 177680675 . T C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 177680985 . C T 540.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.81;SOR=1.739 GT:AD:DP:GQ:PL 1/1:0,17:17:51:569,51,0 chr2 177697137 . T C 675.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.24;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:704,51,0 chr2 177697219 . G C 2359.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.73;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2388,198,0 chr2 177701087 . T C 8094.77 PASS AC=2;AF=1.00;AN=2;DP=255;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.74;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,255:255:99:8123,763,0 chr2 177737038 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 177737111 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 177737165 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 177742325 . C T 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr2 177816989 . G C 979.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.79;SOR=1.942 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1008,87,0 chr2 177865011 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 177905265 . T C 989.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.12;SOR=4.255 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1018,78,0 chr2 177997023 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 177997946 . C T 563.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.41;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,15:15:45:592,45,0 chr2 177998533 . G A 545.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.10;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:51:574,51,0 chr2 178071646 . T G 7865.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.994;ClippingRankSum=0.000;DP=231;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=34.05;ReadPosRankSum=-0.568;SOR=0.303 GT:AD:DP:GQ:PL 1/1:1,230:231:99:7894,683,0 chr2 178071887 . C T 8004.77 PASS AC=2;AF=1.00;AN=2;DP=249;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.15;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,249:249:99:8033,744,0 chr2 178112893 . C G 2769.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.197;ClippingRankSum=0.000;DP=183;ExcessHet=3.0103;FS=2.674;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.14;ReadPosRankSum=-0.076;SOR=1.013 GT:AD:DP:GQ:PL 0/1:93,90:183:99:2798,0,2887 chr2 178121411 . C T 310.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.80;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:339,24,0 chr2 178222354 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 178307390 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 178310653 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 178339070 . G A 1557.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.14;SOR=0.735 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1586,141,0 chr2 178361563 . T C 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.28;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 178372104 . A G 617.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.08;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,22:22:66:646,66,0 chr2 178373531 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 178373780 . T C 3565.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.96;SOR=1.168 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3594,315,0 chr2 178374114 . A G 3769.77 PASS AC=2;AF=1.00;AN=2;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.91;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,108:108:99:3798,323,0 chr2 178374266 . C T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.05;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 178377799 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 178377907 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 178383844 . C T 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.11;ReadPosRankSum=1.645;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,8:16:99:286,0,286 chr2 178385670 . A G 428.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.15;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:457,33,0 chr2 178386903 . C A 376.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:405,30,0 chr2 178394196 . C T 613.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.83;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:642,51,0 chr2 178401918 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 178419936 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 178431899 . G A 185.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.14;ReadPosRankSum=0.477;SOR=0.148 GT:AD:DP:GQ:PL 0/1:19,7:26:99:214,0,712 chr2 178431939 . T C 239.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.745;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=1.753;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.61;ReadPosRankSum=-0.294;SOR=1.329 GT:AD:DP:GQ:PL 0/1:41,11:52:99:268,0,1224 chr2 178432094 . G A 1337.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.527;ClippingRankSum=0.000;DP=230;ExcessHet=3.0103;FS=6.658;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.82;ReadPosRankSum=1.621;SOR=1.160 GT:AD:DP:GQ:PL 0/1:170,60:230:99:1366,0,4852 chr2 178436244 . G A 1250.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.270;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.97;ReadPosRankSum=1.129;SOR=0.692 GT:AD:DP:GQ:PL 0/1:104,53:157:99:1279,0,2806 chr2 178445770 . G A 187.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.198;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=-1.463;SOR=0.175 GT:AD:DP:GQ:PL 0/1:7,7:14:99:216,0,250 chr2 178451054 . C T 1137.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.280;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=18.355;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.73;ReadPosRankSum=-0.009;SOR=1.714 GT:AD:DP:GQ:PL 0/1:54,43:97:99:1166,0,1528 chr2 178454664 . G A 1715.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.21;SOR=1.298 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1744,144,0 chr2 178457588 . T A 103.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:131,9,0 chr2 178458390 . C T 765.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.10;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,19:19:57:794,57,0 chr2 178459298 . C T 3047.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.24;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,89:89:99:3076,267,0 chr2 178472917 . T A 148.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.691;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.40;ReadPosRankSum=-2.000;SOR=1.863 GT:AD:DP:GQ:PL 0/1:6,6:12:99:177,0,242 chr2 178477226 . G A 7644.77 PASS AC=2;AF=1.00;AN=2;DP=228;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=2.121 GT:AD:DP:GQ:PL 1/1:0,228:228:99:7673,683,0 chr2 178493938 . A G 3890.77 PASS AC=2;AF=1.00;AN=2;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.81;QD=33.83;SOR=1.432 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3919,345,0 chr2 178501366 . C T 1197.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.46;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1226,93,0 chr2 178502359 . A G 2286.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=1.308 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2315,216,0 chr2 178503653 . G A 1669.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.08;SOR=2.078 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1698,147,0 chr2 178527353 . A T 1133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.068;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=2.969;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.83;ReadPosRankSum=0.769;SOR=0.399 GT:AD:DP:GQ:PL 0/1:43,39:82:99:1162,0,1301 chr2 178531231 . T C 6402.77 PASS AC=2;AF=1.00;AN=2;DP=197;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.50;SOR=1.056 GT:AD:DP:GQ:PL 1/1:0,197:197:99:6431,591,0 chr2 178531435 . C G 2921.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.266;ClippingRankSum=0.000;DP=253;ExcessHet=3.0103;FS=0.467;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.55;ReadPosRankSum=0.054;SOR=0.754 GT:AD:DP:GQ:PL 0/1:141,112:253:99:2950,0,3862 chr2 178531627 . G A 2347.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.679;ClippingRankSum=0.000;DP=181;ExcessHet=3.0103;FS=1.188;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.97;ReadPosRankSum=-0.011;SOR=0.598 GT:AD:DP:GQ:PL 0/1:101,80:181:99:2376,0,3040 chr2 178532834 . C T 1671.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.107;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=1.379;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.48;ReadPosRankSum=0.193;SOR=0.841 GT:AD:DP:GQ:PL 0/1:69,65:134:99:1700,0,1825 chr2 178534096 . G A 1089.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.172;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=2.950;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.45;ReadPosRankSum=-0.125;SOR=0.424 GT:AD:DP:GQ:PL 0/1:42,39:81:99:1118,0,1238 chr2 178535859 . A G 310.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.149;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.943;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.79;ReadPosRankSum=2.003;SOR=0.566 GT:AD:DP:GQ:PL 0/1:61,21:82:99:339,0,1949 chr2 178537013 . C T 1424.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.642;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=1.555;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.07;ReadPosRankSum=0.109;SOR=0.529 GT:AD:DP:GQ:PL 0/1:68,50:118:99:1453,0,1936 chr2 178538866 . G A 1438.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.052;ClippingRankSum=0.000;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.64;ReadPosRankSum=-0.592;SOR=0.754 GT:AD:DP:GQ:PL 0/1:45,47:92:99:1467,0,1400 chr2 178540059 . A T 1788.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.386;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=1.488;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.16;ReadPosRankSum=0.840;SOR=0.530 GT:AD:DP:GQ:PL 0/1:54,64:118:99:1817,0,1443 chr2 178541080 . A G 398.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.53;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:427,33,0 chr2 178541158 . T C 606.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.195;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.57;ReadPosRankSum=-0.662;SOR=1.044 GT:AD:DP:GQ:PL 0/1:13,18:31:99:635,0,418 chr2 178541276 . C A 3981.77 PASS AC=2;AF=1.00;AN=2;DP=126;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.60;SOR=1.057 GT:AD:DP:GQ:PL 1/1:0,126:126:99:4010,378,0 chr2 178541464 . C T 2042.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.201;ClippingRankSum=0.000;DP=143;ExcessHet=3.0103;FS=0.647;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=-0.136;SOR=0.601 GT:AD:DP:GQ:PL 0/1:59,83:142:99:2071,0,1447 chr2 178546284 . T C 1312.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.699;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=2.722;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.59;ReadPosRankSum=-0.047;SOR=0.625 GT:AD:DP:GQ:PL 0/1:42,48:90:99:1341,0,1194 chr2 178546938 . A G 1035.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.121;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=2.021;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.46;ReadPosRankSum=-0.362;SOR=0.880 GT:AD:DP:GQ:PL 0/1:31,36:67:99:1064,0,957 chr2 178548383 . G A 2304.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.902;ClippingRankSum=0.000;DP=155;ExcessHet=3.0103;FS=4.725;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.87;ReadPosRankSum=-0.519;SOR=1.058 GT:AD:DP:GQ:PL 0/1:74,81:155:99:2333,0,1987 chr2 178549906 . C A 552.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.742;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=2.544;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.56;ReadPosRankSum=-0.365;SOR=0.971 GT:AD:DP:GQ:PL 0/1:25,19:44:99:581,0,764 chr2 178549978 . A T 762.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.953;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.096;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=0.700;SOR=1.022 GT:AD:DP:GQ:PL 0/1:24,26:50:99:791,0,612 chr2 178556743 . T G 442.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.629;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.14;ReadPosRankSum=-0.049;SOR=1.402 GT:AD:DP:GQ:PL 0/1:7,13:20:99:471,0,232 chr2 178556967 . A G 4012.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.89;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,115:115:99:4041,346,0 chr2 178557165 . G C 1454.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.427;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=1.443;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.64;ReadPosRankSum=-0.404;SOR=0.557 GT:AD:DP:GQ:PL 0/1:73,52:125:99:1483,0,2079 chr2 178558372 . A G 1572.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.125;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.68;ReadPosRankSum=1.569;SOR=1.104 GT:AD:DP:GQ:PL 0/1:55,60:115:99:1601,0,1429 chr2 178562459 . A G 3191.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.29;SOR=0.786 GT:AD:DP:GQ:PL 1/1:0,88:88:99:3220,265,0 chr2 178562809 . T C 3558.77 PASS AC=2;AF=1.00;AN=2;DP=112;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.77;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,112:112:99:3587,336,0 chr2 178564277 . G A 921.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.588;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.17;ReadPosRankSum=-1.672;SOR=0.779 GT:AD:DP:GQ:PL 0/1:32,38:70:99:950,0,876 chr2 178565333 . G T 554.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.112;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.064;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.27;ReadPosRankSum=-0.690;SOR=0.484 GT:AD:DP:GQ:PL 0/1:32,22:54:99:583,0,931 chr2 178566270 . G A 1073.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.612;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.793;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.19;ReadPosRankSum=-0.678;SOR=0.842 GT:AD:DP:GQ:PL 0/1:57,39:96:99:1102,0,1581 chr2 178566867 . A G 1496.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.087;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.847;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.01;ReadPosRankSum=-2.656;SOR=0.577 GT:AD:DP:GQ:PL 0/1:31,57:88:99:1525,0,712 chr2 178568494 . T C 1074.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.443;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.831;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=-0.299;SOR=0.804 GT:AD:DP:GQ:PL 0/1:41,39:80:99:1103,0,1134 chr2 178568853 . T C 871.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.106;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=1.915;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.47;ReadPosRankSum=-0.339;SOR=0.465 GT:AD:DP:GQ:PL 0/1:44,32:76:99:900,0,1320 chr2 178569412 . A G 1038.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.176;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.811;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.08;ReadPosRankSum=-0.050;SOR=0.815 GT:AD:DP:GQ:PL 0/1:49,37:86:99:1067,0,1521 chr2 178571293 . G A 977.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.052;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=2.876;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.24;ReadPosRankSum=1.217;SOR=0.755 GT:AD:DP:GQ:PL 0/1:52,35:87:99:1006,0,1434 chr2 178578490 . T G 1144.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=4.548 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1173,90,0 chr2 178579410 . A G 416.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.515;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=4.959;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.02;ReadPosRankSum=-1.628;SOR=0.136 GT:AD:DP:GQ:PL 0/1:17,15:32:99:445,0,614 chr2 178579562 . A G 405.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.065;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.906;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.23;ReadPosRankSum=-1.203;SOR=1.270 GT:AD:DP:GQ:PL 0/1:12,13:25:99:434,0,358 chr2 178579899 . A C 1623.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.004;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=5.912;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.03;ReadPosRankSum=-1.039;SOR=0.704 GT:AD:DP:GQ:PL 0/1:53,55:108:99:1652,0,1412 chr2 178580041 . C G 3452.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.88;SOR=0.712 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3481,314,0 chr2 178580212 . C T 1086.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.441;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=4.667;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.09;ReadPosRankSum=-0.591;SOR=1.329 GT:AD:DP:GQ:PL 0/1:34,38:72:99:1115,0,994 chr2 178583121 . T C 4066.77 PASS AC=2;AF=1.00;AN=2;DP=126;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.28;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,126:126:99:4095,378,0 chr2 178583588 . A C 1190.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.226;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=0.764;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.92;ReadPosRankSum=-0.295;SOR=0.814 GT:AD:DP:GQ:PL 0/1:74,46:120:99:1219,0,2049 chr2 178584184 . G A 647.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=4.294 GT:AD:DP:GQ:PL 1/1:0,17:17:51:676,51,0 chr2 178586693 . G A 2800.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.19;SOR=0.863 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2829,260,0 chr2 178586933 . A G 241.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=1.871;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.09;ReadPosRankSum=-0.364;SOR=1.034 GT:AD:DP:GQ:PL 0/1:12,8:20:99:270,0,434 chr2 178589667 . A G 2851.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.34;SOR=0.959 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2880,273,0 chr2 178590480 . T C 4187.77 PASS AC=2;AF=1.00;AN=2;DP=134;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.25;SOR=0.851 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4216,402,0 chr2 178592420 . G A 1027.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.791;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=1.912;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.70;ReadPosRankSum=-0.623;SOR=0.976 GT:AD:DP:GQ:PL 0/1:37,38:75:99:1056,0,950 chr2 178593864 . C T 613.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.089;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=5.393;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.96;ReadPosRankSum=0.711;SOR=1.085 GT:AD:DP:GQ:PL 0/1:33,23:56:99:642,0,991 chr2 178595830 . A T 671.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.569;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=3.214;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.27;ReadPosRankSum=1.324;SOR=0.310 GT:AD:DP:GQ:PL 0/1:20,24:44:99:700,0,589 chr2 178597415 . A G 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.62;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 178599518 . A G 997.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.526;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=5.446;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.50;ReadPosRankSum=-0.281;SOR=0.909 GT:AD:DP:GQ:PL 0/1:21,36:57:99:1026,0,501 chr2 178599800 . T C 2623.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.39;SOR=1.264 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2652,243,0 chr2 178602455 . G C 949.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.086;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.18;ReadPosRankSum=0.607;SOR=0.793 GT:AD:DP:GQ:PL 0/1:38,40:78:99:978,0,1080 chr2 178604659 . A G 167.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.825;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.32;ReadPosRankSum=-0.335;SOR=0.255 GT:AD:DP:GQ:PL 0/1:12,6:18:99:196,0,435 chr2 178607565 . T A 1164.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.139;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.20;ReadPosRankSum=-0.186;SOR=0.680 GT:AD:DP:GQ:PL 0/1:39,43:82:99:1193,0,1076 chr2 178607966 . A G 1419.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.190;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.91;ReadPosRankSum=-0.625;SOR=0.627 GT:AD:DP:GQ:PL 0/1:56,54:110:99:1448,0,1530 chr2 178609739 . C T 1728.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.124;ClippingRankSum=0.000;DP=159;ExcessHet=3.0103;FS=0.591;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.87;ReadPosRankSum=-0.723;SOR=0.607 GT:AD:DP:GQ:PL 0/1:90,69:159:99:1757,0,2295 chr2 178612749 . T G 805.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.207;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=2.286;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.21;ReadPosRankSum=-0.712;SOR=0.405 GT:AD:DP:GQ:PL 0/1:27,34:61:99:834,0,705 chr2 178615195 . C T 150.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.210;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=7.782;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.13;ReadPosRankSum=-0.431;SOR=3.590 GT:AD:DP:GQ:PL 0/1:1,5:6:24:179,0,24 chr2 178620165 . T A 641.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.062;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=2.266;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.67;ReadPosRankSum=-1.027;SOR=0.420 GT:AD:DP:GQ:PL 0/1:29,26:55:99:670,0,842 chr2 178620872 . A G 843.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.007;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.05;ReadPosRankSum=1.124;SOR=0.809 GT:AD:DP:GQ:PL 0/1:35,35:70:99:872,0,876 chr2 178634803 . T C 815.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.161;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.843;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.49;ReadPosRankSum=1.596;SOR=0.547 GT:AD:DP:GQ:PL 0/1:53,33:86:99:844,0,1396 chr2 178636063 . A G 2487.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.556;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=0.547;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.90;ReadPosRankSum=-0.342;SOR=0.746 GT:AD:DP:GQ:PL 0/1:83,96:179:99:2516,0,2367 chr2 178637226 . T C 155.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.25;ReadPosRankSum=-1.068;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:184,0,62 chr2 178641169 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 178649074 . C T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.19;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 178649693 . G A 453.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.148;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.80;ReadPosRankSum=0.892;SOR=0.638 GT:AD:DP:GQ:PL 0/1:25,17:42:99:482,0,682 chr2 178649706 . T C 1447.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.47;SOR=1.259 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1476,126,0 chr2 178649781 . A C 663.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.876;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=7.425;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.06;ReadPosRankSum=1.151;SOR=1.802 GT:AD:DP:GQ:PL 0/1:35,25:60:99:692,0,975 chr2 178650710 . T G 1183.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.912;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=2.500;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=-0.439;SOR=0.961 GT:AD:DP:GQ:PL 0/1:59,50:109:99:1212,0,1407 chr2 178650960 . T C 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.875;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=-0.023;SOR=0.283 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,235 chr2 178651047 . A G 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.842;SOR=0.368 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr2 178652927 . T C 312.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.760;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=6.029;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.17;ReadPosRankSum=0.915;SOR=1.928 GT:AD:DP:GQ:PL 0/1:17,11:28:99:341,0,478 chr2 178653276 . A G 1092.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.443;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=10.643;MLEAC=1;MLEAF=0.500;MQ=54.26;MQRankSum=-2.416;QD=12.01;ReadPosRankSum=0.432;SOR=0.204 GT:AD:DP:GQ:PL 0/1:47,44:91:99:1121,0,1400 chr2 178653325 . A G 395.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.052;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=12.273;MLEAC=1;MLEAF=0.500;MQ=43.68;MQRankSum=-5.259;QD=3.17;ReadPosRankSum=1.300;SOR=2.059 GT:AD:DP:GQ:PL 0/1:97,28:125:99:424,0,2932 chr2 178663651 . C T 752.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.515;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.88;ReadPosRankSum=-0.795;SOR=1.264 GT:AD:DP:GQ:PL 0/1:5,23:28:91:781,0,91 chr2 178664262 . C T 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=3.802;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=-0.055;SOR=0.093 GT:AD:DP:GQ:PL 0/1:7,5:12:99:173,0,247 chr2 178664546 . A G 1069.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.906;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=1.926;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.89;ReadPosRankSum=-0.607;SOR=0.948 GT:AD:DP:GQ:PL 0/1:41,36:77:99:1098,0,1055 chr2 178664770 . T G 1750.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.682;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=2.293;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.23;ReadPosRankSum=-0.510;SOR=0.921 GT:AD:DP:GQ:PL 0/1:59,64:123:99:1779,0,1674 chr2 178666966 . A G 163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.173;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.44;ReadPosRankSum=-0.045;SOR=0.770 GT:AD:DP:GQ:PL 0/1:15,7:22:99:192,0,474 chr2 178675176 . C A 1733.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.71;SOR=1.791 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1762,159,0 chr2 178675909 . G T 811.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.182;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.54;ReadPosRankSum=-0.406;SOR=0.754 GT:AD:DP:GQ:PL 0/1:40,37:77:99:840,0,914 chr2 178677172 . C G 3023.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.24;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3052,300,0 chr2 178677431 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 178677506 . G A 260.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.38;ReadPosRankSum=0.663;SOR=0.818 GT:AD:DP:GQ:PL 0/1:7,8:15:99:289,0,247 chr2 178678490 . C T 652.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.818;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=2.445;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.06;ReadPosRankSum=-0.427;SOR=1.179 GT:AD:DP:GQ:PL 0/1:36,23:59:99:681,0,935 chr2 178683133 . A G 551.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.054;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=-0.932;SOR=0.693 GT:AD:DP:GQ:PL 0/1:34,25:59:99:580,0,856 chr2 178685385 . A G 708.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.164;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=2.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.29;ReadPosRankSum=1.331;SOR=0.385 GT:AD:DP:GQ:PL 0/1:18,23:41:99:737,0,571 chr2 178689190 . G A 1242.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.537;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.68;ReadPosRankSum=0.192;SOR=0.693 GT:AD:DP:GQ:PL 0/1:52,46:98:99:1271,0,1435 chr2 178689280 . G C 1015.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.455;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.968;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.65;ReadPosRankSum=1.279;SOR=0.840 GT:AD:DP:GQ:PL 0/1:28,33:61:99:1044,0,883 chr2 178689578 . C T 553.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.854;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.45;ReadPosRankSum=-0.434;SOR=0.590 GT:AD:DP:GQ:PL 0/1:32,21:53:99:582,0,897 chr2 178693555 . T A 571.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.01;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,16:16:48:600,48,0 chr2 178693639 . T C 1807.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.72;SOR=1.692 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1836,171,0 chr2 178697413 . T C 521.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.596;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.35;ReadPosRankSum=-0.062;SOR=1.519 GT:AD:DP:GQ:PL 0/1:18,16:34:99:550,0,615 chr2 178701419 . T G 1053.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.93;SOR=2.165 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1082,96,0 chr2 178704673 . C T 342.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.332;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=2.753;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.97;ReadPosRankSum=-0.318;SOR=0.360 GT:AD:DP:GQ:PL 0/1:27,16:43:99:371,0,829 chr2 178704709 . A G 450.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.526;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=2.895;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.86;ReadPosRankSum=0.682;SOR=0.499 GT:AD:DP:GQ:PL 0/1:21,17:38:99:479,0,661 chr2 178705387 . A T 283.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.74;ReadPosRankSum=0.377;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,8:16:99:312,0,565 chr2 178705395 . C A 283.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.74;ReadPosRankSum=-0.444;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,8:16:99:312,0,566 chr2 178709657 . C T 1029.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.137;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=5.762;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.24;ReadPosRankSum=-0.403;SOR=0.425 GT:AD:DP:GQ:PL 0/1:78,47:125:99:1058,0,2154 chr2 178709988 . A G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.842;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 178710784 . C T 1878.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.371;ClippingRankSum=0.000;DP=143;ExcessHet=3.0103;FS=4.243;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.14;ReadPosRankSum=1.664;SOR=0.406 GT:AD:DP:GQ:PL 0/1:74,69:143:99:1907,0,2106 chr2 178711869 . A T 1308.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.56;SOR=2.613 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1337,117,0 chr2 178714003 . G A 3717.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.33;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3746,345,0 chr2 178714210 . A G 1107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.548;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.07;ReadPosRankSum=0.027;SOR=0.647 GT:AD:DP:GQ:PL 0/1:68,42:110:99:1136,0,1868 chr2 178714366 . T C 673.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.207;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=8.645;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.49;ReadPosRankSum=0.743;SOR=1.682 GT:AD:DP:GQ:PL 0/1:45,26:71:99:702,0,1256 chr2 178714485 . T C 1861.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.71;SOR=1.077 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1890,159,0 chr2 178714639 . G A 142.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.080;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.92;ReadPosRankSum=0.330;SOR=0.307 GT:AD:DP:GQ:PL 0/1:10,6:16:99:171,0,333 chr2 178714967 . T A 1814.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.672;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=3.616;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.12;ReadPosRankSum=0.462;SOR=1.052 GT:AD:DP:GQ:PL 0/1:55,65:120:99:1843,0,1562 chr2 178715095 . T A 5243.77 PASS AC=2;AF=1.00;AN=2;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.05;SOR=0.984 GT:AD:DP:GQ:PL 1/1:0,154:154:99:5272,463,0 chr2 178715341 . A C 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.18;ReadPosRankSum=0.842;SOR=0.582 GT:AD:DP:GQ:PL 0/1:6,9:15:99:331,0,203 chr2 178715366 . A C 135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.849;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.05;ReadPosRankSum=1.037;SOR=0.646 GT:AD:DP:GQ:PL 0/1:10,5:15:99:164,0,360 chr2 178715707 . A G 1784.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.088;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=0.640;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.93;ReadPosRankSum=0.290;SOR=0.624 GT:AD:DP:GQ:PL 0/1:68,70:138:99:1813,0,1767 chr2 178715856 . T C 728.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.57;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,19:19:57:757,57,0 chr2 178716913 . T A 51.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.75;ReadPosRankSum=1.437;SOR=0.105 GT:AD:DP:GQ:PL 0/1:5,4:9:80:80,0,168 chr2 178717108 . C A 947.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.640;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.35;ReadPosRankSum=-1.687;SOR=0.608 GT:AD:DP:GQ:PL 0/1:34,37:71:99:976,0,1003 chr2 178717435 . C T 1272.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.129;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=1.587;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.36;ReadPosRankSum=-0.674;SOR=0.532 GT:AD:DP:GQ:PL 0/1:53,50:103:99:1301,0,1632 chr2 178717600 . C T 1431.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.292;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=2.696;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.23;ReadPosRankSum=0.931;SOR=0.532 GT:AD:DP:GQ:PL 0/1:41,53:94:99:1460,0,1155 chr2 178717810 . G T 2588.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.06;SOR=1.051 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2617,228,0 chr2 178717878 . A G 1173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.024;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.863;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.24;ReadPosRankSum=-0.319;SOR=0.829 GT:AD:DP:GQ:PL 0/1:37,40:77:99:1202,0,1025 chr2 178718671 . T C 1724.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.169;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=3.500;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.54;ReadPosRankSum=-0.460;SOR=0.481 GT:AD:DP:GQ:PL 0/1:52,59:111:99:1753,0,1527 chr2 178718769 . T G 1790.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.141;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=1.330;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.52;ReadPosRankSum=1.473;SOR=0.812 GT:AD:DP:GQ:PL 0/1:81,62:143:99:1819,0,2246 chr2 178720539 . C T 2578.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.13;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2607,219,0 chr2 178720666 . A G 1116.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.85;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1145,102,0 chr2 178721236 . A G 145.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.389;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.41;ReadPosRankSum=1.113;SOR=0.105 GT:AD:DP:GQ:PL 0/1:8,6:14:99:174,0,290 chr2 178722185 . A G 696.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.565;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.60;ReadPosRankSum=1.312;SOR=0.631 GT:AD:DP:GQ:PL 0/1:51,30:81:99:725,0,1554 chr2 178722403 . C G 1303.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.102;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=2.565;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.54;ReadPosRankSum=-0.785;SOR=0.616 GT:AD:DP:GQ:PL 0/1:58,46:104:99:1332,0,1536 chr2 178722960 . T C 2097.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.96;SOR=0.831 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2126,180,0 chr2 178724644 . G T 370.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.993;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.906;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.83;ReadPosRankSum=0.215;SOR=1.270 GT:AD:DP:GQ:PL 0/1:12,13:25:99:399,0,324 chr2 178725192 . A C 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-1.068;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr2 178727434 . A G 164.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.67;ReadPosRankSum=1.537;SOR=0.193 GT:AD:DP:GQ:PL 0/1:13,6:19:99:193,0,486 chr2 178727997 . A G 100.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.30;ReadPosRankSum=-1.919;SOR=0.527 GT:AD:DP:GQ:PL 0/1:12,4:16:99:129,0,954 chr2 178728008 . C A 100.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.72;ReadPosRankSum=-1.119;SOR=0.368 GT:AD:DP:GQ:PL 0/1:12,3:15:99:129,0,954 chr2 178730390 . C G 2554.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2583,210,0 chr2 178735681 . C T 1040.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.987;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.17;ReadPosRankSum=0.187;SOR=0.734 GT:AD:DP:GQ:PL 0/1:38,41:79:99:1069,0,1066 chr2 178735836 . G A 3002.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.54;SOR=1.206 GT:AD:DP:GQ:PL 1/1:0,84:84:99:3031,252,0 chr2 178735921 . C T 1320.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.084;ClippingRankSum=0.000;DP=128;ExcessHet=3.0103;FS=0.685;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.32;ReadPosRankSum=1.308;SOR=0.828 GT:AD:DP:GQ:PL 0/1:72,56:128:99:1349,0,1975 chr2 178739433 . T G 1630.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.282;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=3.130;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.45;ReadPosRankSum=-1.557;SOR=0.528 GT:AD:DP:GQ:PL 0/1:68,63:131:99:1659,0,1850 chr2 178739639 . T G 1095.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.032;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.07;ReadPosRankSum=1.520;SOR=0.669 GT:AD:DP:GQ:PL 0/1:56,43:99:99:1124,0,1452 chr2 178740015 . G A 1078.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.096;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.66;ReadPosRankSum=-0.174;SOR=0.743 GT:AD:DP:GQ:PL 0/1:40,39:79:99:1107,0,1129 chr2 178740453 . C A,T 2867.77 PASS AC=1,1;AF=0.500,0.500;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=1,1;MLEAF=0.500,0.500;MQ=60.00;QD=28.68;SOR=0.957 GT:AD:DP:GQ:PL 1/2:0,52,48:100:99:2896,1357,1201,1539,0,1395 chr2 178740978 . A G 1165.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.577;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=2.455;SOR=0.743 GT:AD:DP:GQ:PL 0/1:48,41:89:99:1194,0,1558 chr2 178741811 . G A 1278.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.505;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=2.549;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.84;ReadPosRankSum=1.378;SOR=1.032 GT:AD:DP:GQ:PL 0/1:60,48:108:99:1307,0,1646 chr2 178746984 . C A 1496.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.836;ClippingRankSum=0.000;DP=116;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.90;ReadPosRankSum=-2.210;SOR=0.693 GT:AD:DP:GQ:PL 0/1:58,58:116:99:1525,0,1449 chr2 178750225 . A G 2613.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.51;SOR=1.040 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2642,234,0 chr2 178751160 . T C 217.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.090;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=1.255;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.27;ReadPosRankSum=0.481;SOR=0.960 GT:AD:DP:GQ:PL 0/1:39,12:51:99:246,0,1135 chr2 178751204 . C G 1760.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.52;SOR=0.732 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1789,153,0 chr2 178751267 . T C 1961.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.25;SOR=0.796 GT:AD:DP:GQ:PL 1/1:0,59:59:99:1990,177,0 chr2 178756224 . C T 453.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.549;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.35;ReadPosRankSum=-1.519;SOR=0.627 GT:AD:DP:GQ:PL 0/1:15,19:34:99:482,0,388 chr2 178758078 . A G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 178758850 . G T 183.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.42;ReadPosRankSum=-0.921;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:98:212,0,98 chr2 178759031 . C T 688.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.019;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=3.466;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.93;ReadPosRankSum=-0.609;SOR=1.000 GT:AD:DP:GQ:PL 0/1:34,29:63:99:717,0,959 chr2 178759212 . T C 788.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.95;SOR=2.737 GT:AD:DP:GQ:PL 1/1:0,22:22:66:817,66,0 chr2 178764636 . T C 8372.77 PASS AC=2;AF=1.00;AN=2;DP=251;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.36;SOR=0.717 GT:AD:DP:GQ:PL 1/1:0,251:251:99:8401,754,0 chr2 178764734 . C T 2411.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.104;ClippingRankSum=0.000;DP=202;ExcessHet=3.0103;FS=1.780;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.94;ReadPosRankSum=-0.018;SOR=0.838 GT:AD:DP:GQ:PL 0/1:106,96:202:99:2440,0,2825 chr2 178766487 . T C 2152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.241;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.64;ReadPosRankSum=-1.597;SOR=0.726 GT:AD:DP:GQ:PL 0/1:67,80:147:99:2181,0,1644 chr2 178766635 . A C 1251.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.77;SOR=2.179 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1280,108,0 chr2 178770209 . C T 1984.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.104;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=0.621;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.08;ReadPosRankSum=-0.245;SOR=0.722 GT:AD:DP:GQ:PL 0/1:69,72:141:99:2013,0,1810 chr2 178771062 . A T 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.21;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 178771123 . T C 301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.143;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.07;ReadPosRankSum=-0.084;SOR=0.387 GT:AD:DP:GQ:PL 0/1:15,10:25:99:330,0,551 chr2 178771155 . C T 1766.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=3.958 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1795,141,0 chr2 178771530 . T A 672.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.282;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=1.049;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.19;ReadPosRankSum=-1.055;SOR=0.871 GT:AD:DP:GQ:PL 0/1:38,28:66:99:701,0,1002 chr2 178773134 . C G 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.774;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.70;ReadPosRankSum=-0.835;SOR=0.426 GT:AD:DP:GQ:PL 0/1:21,6:27:99:101,0,626 chr2 178774570 . C T 217.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.11;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:246,21,0 chr2 178774771 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 178775975 . T G 1771.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.172;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=1.371;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.32;ReadPosRankSum=-1.984;SOR=0.559 GT:AD:DP:GQ:PL 0/1:67,66:133:99:1800,0,1809 chr2 178777248 . C T 1035.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.512;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.79;ReadPosRankSum=-0.070;SOR=0.673 GT:AD:DP:GQ:PL 0/1:44,37:81:99:1064,0,1100 chr2 178777698 . G A 2587.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.18;SOR=0.818 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2616,248,0 chr2 178777856 . A G 1224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.458;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=1.725;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.61;ReadPosRankSum=-0.311;SOR=0.966 GT:AD:DP:GQ:PL 0/1:43,47:90:99:1253,0,1089 chr2 178779159 . A G 2256.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.19;SOR=0.957 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2285,198,0 chr2 178779207 . A G 2440.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.54;SOR=0.832 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2469,225,0 chr2 178779308 . G A 2172.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.36;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2201,222,0 chr2 178779433 . T C 213.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.111;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.25;ReadPosRankSum=-0.061;SOR=0.836 GT:AD:DP:GQ:PL 0/1:7,8:15:99:242,0,213 chr2 178780379 . A T 216.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.84;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:245,18,0 chr2 178780850 . C T 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-0.414;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr2 178781004 . C A 866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.533;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.962;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.56;ReadPosRankSum=-1.375;SOR=0.863 GT:AD:DP:GQ:PL 0/1:37,32:69:99:895,0,1028 chr2 178782819 . A G 790.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.307;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=1.314;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.51;ReadPosRankSum=-1.409;SOR=0.954 GT:AD:DP:GQ:PL 0/1:23,28:51:99:819,0,638 chr2 178783097 . G A 1443.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.731;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=4.658;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.04;ReadPosRankSum=-0.436;SOR=0.299 GT:AD:DP:GQ:PL 0/1:42,54:96:99:1472,0,1216 chr2 178786227 . G A 1007.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.386;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=5.734;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.82;ReadPosRankSum=-0.192;SOR=1.545 GT:AD:DP:GQ:PL 0/1:35,33:68:99:1036,0,1017 chr2 178790897 . T C 1179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.387;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=0.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.96;ReadPosRankSum=1.186;SOR=0.889 GT:AD:DP:GQ:PL 0/1:49,42:91:99:1208,0,1419 chr2 178795185 . G A 2801.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.584;ClippingRankSum=0.000;DP=199;ExcessHet=3.0103;FS=3.217;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.08;ReadPosRankSum=-1.166;SOR=0.489 GT:AD:DP:GQ:PL 0/1:96,103:199:99:2830,0,2682 chr2 178800113 . T C 597.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.42;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,15:15:45:626,45,0 chr2 178800722 . G A 281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.273;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.81;ReadPosRankSum=-0.150;SOR=1.214 GT:AD:DP:GQ:PL 0/1:13,9:22:99:310,0,442 chr2 178802363 . C T 4801.77 PASS AC=2;AF=1.00;AN=2;DP=142;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.82;SOR=2.173 GT:AD:DP:GQ:PL 1/1:0,142:142:99:4830,426,0 chr2 178817688 . G A 640.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.448;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=5.117;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.01;ReadPosRankSum=0.334;SOR=1.562 GT:AD:DP:GQ:PL 0/1:41,23:64:99:669,0,1224 chr2 178834117 . G A 704.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.469;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=6.388;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.37;ReadPosRankSum=-1.090;SOR=0.201 GT:AD:DP:GQ:PL 0/1:32,30:62:99:733,0,980 chr2 178837541 . A G 8644.77 PASS AC=2;AF=1.00;AN=2;DP=255;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.90;SOR=0.817 GT:AD:DP:GQ:PL 1/1:0,255:255:99:8673,765,0 chr2 178837883 . C T 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=-0.819;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,140 chr2 178845823 . C G 687.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.840;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.63;ReadPosRankSum=0.144;SOR=0.787 GT:AD:DP:GQ:PL 0/1:21,26:47:99:716,0,600 chr2 178845979 . A G 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr2 178849948 . C T 460.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.85;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:489,36,0 chr2 178865541 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr2 178866125 . A G 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-0.022;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr2 178868253 . A G 1526.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.93;SOR=2.252 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1555,134,0 chr2 178868270 . A T 430.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.930;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=6.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.67;ReadPosRankSum=-2.571;SOR=0.117 GT:AD:DP:GQ:PL 0/1:18,16:34:99:459,0,571 chr2 178868284 . A T 448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.62;ReadPosRankSum=0.811;SOR=1.739 GT:AD:DP:GQ:PL 0/1:6,13:19:99:477,0,189 chr2 178868867 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 178871219 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 178872417 . C A 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.69;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr2 178878273 . T G 127.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.56;ReadPosRankSum=0.000;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:156,0,27 chr2 178887090 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 178888518 . C T 923.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.199;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=3.601;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.21;ReadPosRankSum=0.400;SOR=0.315 GT:AD:DP:GQ:PL 0/1:31,34:65:99:952,0,929 chr2 178888822 . G A 490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.883;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.725;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.34;ReadPosRankSum=0.135;SOR=0.392 GT:AD:DP:GQ:PL 0/1:14,18:32:99:519,0,415 chr2 178944773 . C T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 178975106 . A G 1011.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.91;SOR=0.869 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1040,104,0 chr2 178975161 . G A 393.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.545;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=3.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=-1.397;SOR=1.609 GT:AD:DP:GQ:PL 0/1:13,14:27:99:422,0,326 chr2 178978885 . G A 834.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.81;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,28:28:84:863,84,0 chr2 179049913 . G A 932.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.738;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=1.097;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.66;ReadPosRankSum=-0.740;SOR=0.481 GT:AD:DP:GQ:PL 0/1:20,36:56:99:961,0,535 chr2 179055135 . T G 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=29.22;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr2 179055136 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 179115343 . G A 245.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.553;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.29;ReadPosRankSum=-0.136;SOR=1.179 GT:AD:DP:GQ:PL 0/1:12,8:20:99:274,0,395 chr2 179149169 . C G 271.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.849;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.41;ReadPosRankSum=1.426;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,9:14:99:300,0,167 chr2 179174341 . C T 830.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.536;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=2.971;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.57;ReadPosRankSum=-0.347;SOR=1.392 GT:AD:DP:GQ:PL 0/1:29,28:57:99:859,0,804 chr2 179183019 . G C 1167.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.812;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=1.026;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.37;ReadPosRankSum=-1.969;SOR=0.512 GT:AD:DP:GQ:PL 0/1:37,39:76:99:1196,0,1066 chr2 179183181 . T C 1596.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.759;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=0.695;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=0.758;SOR=0.796 GT:AD:DP:GQ:PL 0/1:60,64:124:99:1625,0,1417 chr2 179183344 . T C 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,131 chr2 179191614 . G A 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.253;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 179264639 . A G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.524;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 179308591 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 179337733 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 179400431 . T C 161.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.11;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:190,21,0 chr2 179483518 . T G 244.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.64;ReadPosRankSum=-1.352;SOR=0.346 GT:AD:DP:GQ:PL 0/1:14,9:23:99:273,0,481 chr2 179502377 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 179518771 . C A 513.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.83;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:542,39,0 chr2 179683664 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 179683808 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 179745960 . G A 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.65;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 179751984 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 179794985 . G C 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr2 179860583 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 179860754 . T C 591.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.73;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:69:620,69,0 chr2 179861799 . G A 56.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=14.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:84,12,0 chr2 179945537 . A T 438.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.227;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.30;ReadPosRankSum=-0.024;SOR=0.818 GT:AD:DP:GQ:PL 0/1:17,16:33:99:467,0,441 chr2 179945631 . C T 258.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.087;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=1.922;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=-0.999;SOR=0.223 GT:AD:DP:GQ:PL 0/1:9,12:21:99:287,0,245 chr2 179966231 . A G 501.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.395;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.68;ReadPosRankSum=1.331;SOR=1.514 GT:AD:DP:GQ:PL 0/1:17,15:32:99:530,0,580 chr2 179970862 . A G 2139.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=0.758 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2168,185,0 chr2 179971065 . T A 663.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.116;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=2.111;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.85;ReadPosRankSum=0.388;SOR=1.042 GT:AD:DP:GQ:PL 0/1:47,28:75:99:692,0,1336 chr2 179971095 . A T 456.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.045;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=4.655;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.74;ReadPosRankSum=-2.024;SOR=1.532 GT:AD:DP:GQ:PL 0/1:40,19:59:99:485,0,1141 chr2 179972995 . T C 313.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.55;ReadPosRankSum=0.689;SOR=1.148 GT:AD:DP:GQ:PL 0/1:15,10:25:99:342,0,551 chr2 179973079 . T A 1376.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.762;ClippingRankSum=0.000;DP=111;ExcessHet=3.0103;FS=3.922;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.40;ReadPosRankSum=-0.053;SOR=1.111 GT:AD:DP:GQ:PL 0/1:62,49:111:99:1405,0,1697 chr2 179978399 . C T 388.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.031;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=2.366;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=-0.879;SOR=1.536 GT:AD:DP:GQ:PL 0/1:12,14:26:99:417,0,355 chr2 179982016 . G T 806.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.991;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=2.811;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.94;ReadPosRankSum=-1.215;SOR=0.336 GT:AD:DP:GQ:PL 0/1:22,32:54:99:835,0,689 chr2 180044368 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 180044461 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 180107000 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 180107025 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 180115606 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 180313873 . T G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.75;ReadPosRankSum=0.674;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:72,0,34 chr2 181175700 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 181209015 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 181209040 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 181482227 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 181485720 . A G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.46;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 181486016 . A G 1622.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.46;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1651,149,0 chr2 181494438 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 181494886 . G A 718.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.60;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,19:19:57:747,57,0 chr2 181495455 . T C 1479.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.48;SOR=1.378 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1508,141,0 chr2 181498886 . T A 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.63;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 181509452 . T C 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr2 181509807 . A G 1897.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.89;SOR=2.387 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1926,167,0 chr2 181511819 . T G 1156.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.13;SOR=1.547 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1185,108,0 chr2 181522406 . A G 797.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.91;SOR=1.893 GT:AD:DP:GQ:PL 1/1:0,25:25:74:826,74,0 chr2 181529418 . C T 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.56;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 181529840 . A G 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr2 181530618 . G A 4122.77 PASS AC=2;AF=1.00;AN=2;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=0.771 GT:AD:DP:GQ:PL 1/1:0,131:131:99:4151,392,0 chr2 181534370 . T C 1259.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.30;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1288,117,0 chr2 181534911 . A G 1223.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.59;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1252,120,0 chr2 181535259 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 181538063 . G A 1543.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.31;SOR=2.059 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1572,135,0 chr2 181539124 . G A 3270.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.71;SOR=0.733 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3299,300,0 chr2 181539412 . C G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 181548532 . A G 1020.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.90;SOR=2.165 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1049,96,0 chr2 181548875 . A T 3226.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.96;SOR=2.636 GT:AD:DP:GQ:PL 1/1:0,90:90:99:3255,270,0 chr2 181656851 . G A 4395.77 PASS AC=2;AF=1.00;AN=2;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.05;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,133:133:99:4424,397,0 chr2 181678728 . T C 2337.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.69;SOR=0.925 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2366,195,0 chr2 181695737 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 181901837 . G A 1198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.730;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.796;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.17;ReadPosRankSum=-1.144;SOR=0.839 GT:AD:DP:GQ:PL 0/1:46,45:91:99:1227,0,1205 chr2 181929807 . G A 300.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.42;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:329,27,0 chr2 181996977 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 182061417 . T C 1774.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.27;SOR=0.970 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1803,165,0 chr2 182063828 . G C 4437.77 PASS AC=2;AF=1.00;AN=2;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.93;SOR=1.001 GT:AD:DP:GQ:PL 1/1:0,139:139:99:4466,417,0 chr2 182117119 . G C 731.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.29;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,19:19:57:760,57,0 chr2 182185659 . G C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 182186694 . A G 677.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.50;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:706,51,0 chr2 182205892 . A T 1785.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.22;SOR=4.362 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1814,141,0 chr2 182206184 . G A 1482.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.44;SOR=7.276 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1511,111,0 chr2 182322587 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 182322588 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 182518004 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 182540241 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 182540287 . C A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.10;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 182606533 . C T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 182606602 . T G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.31;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 182606606 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.14;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 182626080 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 182718403 . A G 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=0.842;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr2 182720028 . G A 872.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.545;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=1.261;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.79;ReadPosRankSum=-1.588;SOR=0.418 GT:AD:DP:GQ:PL 0/1:29,30:59:99:901,0,824 chr2 182728970 . C T 3221.77 PASS AC=2;AF=1.00;AN=2;DP=108;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.11;SOR=1.211 GT:AD:DP:GQ:PL 1/1:0,107:107:99:3250,321,0 chr2 182732591 . A G 1889.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.75;SOR=2.221 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1918,168,0 chr2 182732735 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 182740350 . C A 697.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.347;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=4.479;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.86;ReadPosRankSum=-1.244;SOR=1.193 GT:AD:DP:GQ:PL 0/1:15,29:44:99:726,0,409 chr2 182743900 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 182751423 . T C 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr2 182752021 . G C 2540.77 PASS AC=2;AF=1.00;AN=2;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.54;SOR=1.192 GT:AD:DP:GQ:PL 1/1:0,86:86:99:2569,257,0 chr2 182757820 . T G 1170.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.52;SOR=1.949 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1199,108,0 chr2 182757914 . A G 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.524;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr2 182759033 . A G 615.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.399;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=-1.677;SOR=0.392 GT:AD:DP:GQ:PL 0/1:17,18:35:99:644,0,605 chr2 182762777 . A G 2401.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.60;SOR=1.349 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2430,228,0 chr2 182762892 . C G 1029.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.14;SOR=2.910 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1058,87,0 chr2 182775624 . A C 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.180;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.11;ReadPosRankSum=0.000;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:92:134,0,92 chr2 182779178 . A T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 182787559 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 182787601 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 182789000 . C A 101.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:129,9,0 chr2 182789006 . C T 101.28 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.55;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:9:129,9,0 chr2 182834637 . C T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=0.000;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr2 182834857 . G C 737.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.696;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=0.841;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.00;ReadPosRankSum=-0.338;SOR=0.554 GT:AD:DP:GQ:PL 0/1:47,35:82:99:766,0,1270 chr2 182835041 . G A 93.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.25;ReadPosRankSum=-0.206;SOR=0.160 GT:AD:DP:GQ:PL 0/1:11,4:15:99:122,0,414 chr2 182838102 . T C 247.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.300;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.06;ReadPosRankSum=0.800;SOR=1.022 GT:AD:DP:GQ:PL 0/1:3,10:13:52:276,0,52 chr2 182858994 . A G 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.86;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr2 182866465 . C A 1383.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.113;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=7.326;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.93;ReadPosRankSum=1.677;SOR=1.493 GT:AD:DP:GQ:PL 0/1:60,47:107:99:1412,0,1686 chr2 182906108 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 182906163 . C T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.90;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 182906168 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.59;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 182928655 . T C 487.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.789;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.21;ReadPosRankSum=0.773;SOR=0.963 GT:AD:DP:GQ:PL 0/1:10,13:23:99:516,0,711 chr2 182928670 . A G 847.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.897;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=10.736;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.18;ReadPosRankSum=0.670;SOR=3.493 GT:AD:DP:GQ:PL 0/1:19,23:42:99:876,0,978 chr2 182930397 . T A 152.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.97;ReadPosRankSum=0.040;SOR=0.941 GT:AD:DP:GQ:PL 0/1:4,5:9:99:181,0,105 chr2 182934830 . G C 599.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.295;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=2.323;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.32;ReadPosRankSum=0.182;SOR=1.101 GT:AD:DP:GQ:PL 0/1:26,27:53:99:628,0,608 chr2 182939127 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 182962290 . G A 749.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.087;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.56;ReadPosRankSum=-0.009;SOR=0.807 GT:AD:DP:GQ:PL 0/1:44,27:71:99:778,0,1204 chr2 182977276 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 182983325 . A G 664.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.569;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=6.551;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.78;ReadPosRankSum=0.249;SOR=0.522 GT:AD:DP:GQ:PL 0/1:40,28:68:99:693,0,1126 chr2 182983386 . T C 555.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.229;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.970;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.55;ReadPosRankSum=-0.964;SOR=0.960 GT:AD:DP:GQ:PL 0/1:39,26:65:99:584,0,956 chr2 182986330 . C T 649.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:678,51,0 chr2 182995570 . G A 561.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.344;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.61;ReadPosRankSum=0.481;SOR=1.220 GT:AD:DP:GQ:PL 0/1:10,16:26:99:590,0,327 chr2 183038215 . G T 381.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=-0.033;SOR=1.127 GT:AD:DP:GQ:PL 0/1:18,12:30:99:410,0,662 chr2 183051489 . C T 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.524;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,75 chr2 183070981 . C G 41.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.328;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.97;ReadPosRankSum=-0.566;SOR=0.446 GT:AD:DP:GQ:PL 0/1:4,3:7:70:70,0,112 chr2 183071601 . T C 647.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.47;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:51:676,51,0 chr2 183072182 . A G 356.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.323;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.19;ReadPosRankSum=0.697;SOR=0.631 GT:AD:DP:GQ:PL 0/1:20,15:35:99:385,0,565 chr2 183072187 . A G 1361.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.96;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1390,108,0 chr2 183079224 . C T 769.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.887;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=2.756;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.27;ReadPosRankSum=0.190;SOR=0.296 GT:AD:DP:GQ:PL 0/1:29,29:58:99:798,0,917 chr2 183095794 . T C 237.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.493;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.78;ReadPosRankSum=-0.967;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,8:10:53:266,0,53 chr2 183124175 . C T 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.09;ReadPosRankSum=0.508;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:182,0,140 chr2 183124256 . C G 686.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.260;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=1.653;SOR=0.643 GT:AD:DP:GQ:PL 0/1:23,22:45:99:715,0,685 chr2 183128505 . A G 293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.917;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.94;ReadPosRankSum=2.063;SOR=0.973 GT:AD:DP:GQ:PL 0/1:25,12:37:99:322,0,714 chr2 183130347 . A G 71.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.96;ReadPosRankSum=-0.842;SOR=0.368 GT:AD:DP:GQ:PL 0/1:2,4:6:66:100,0,66 chr2 183130393 . T A 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.305;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=2.398;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.56;ReadPosRankSum=0.100;SOR=1.609 GT:AD:DP:GQ:PL 0/1:7,5:12:95:95,0,200 chr2 183130414 . G T 478.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.460;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.80;ReadPosRankSum=1.884;SOR=1.022 GT:AD:DP:GQ:PL 0/1:8,13:21:99:507,0,239 chr2 183130784 . G T 256.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.12;ReadPosRankSum=-0.908;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,8:15:99:285,0,247 chr2 183131014 . A C 1646.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.07;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1675,158,0 chr2 183151291 . A C 416.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.492;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=2.072;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.67;ReadPosRankSum=1.128;SOR=0.288 GT:AD:DP:GQ:PL 0/1:9,16:25:99:445,0,265 chr2 183151664 . C T 648.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.411;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=3.358;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.89;ReadPosRankSum=-0.347;SOR=0.350 GT:AD:DP:GQ:PL 0/1:45,28:73:99:677,0,1353 chr2 183156763 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 183157179 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 183157287 . G C 483.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.733;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.03;ReadPosRankSum=0.870;SOR=0.439 GT:AD:DP:GQ:PL 0/1:5,18:23:99:512,0,127 chr2 183157717 . T G 218.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.33;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:247,18,0 chr2 183157760 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 183158423 . G A 828.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.108;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=2.431;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.07;ReadPosRankSum=-0.059;SOR=0.384 GT:AD:DP:GQ:PL 0/1:24,31:55:99:857,0,628 chr2 183158567 . G A 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.887;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.10;ReadPosRankSum=0.732;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:69:69,0,181 chr2 183161147 . G T 676.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.810;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=3.274;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.34;ReadPosRankSum=-0.879;SOR=0.252 GT:AD:DP:GQ:PL 0/1:17,18:35:99:705,0,1109 chr2 183161148 . A T 676.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.810;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=3.274;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.34;ReadPosRankSum=-0.880;SOR=0.252 GT:AD:DP:GQ:PL 0/1:17,18:35:99:705,0,1109 chr2 183188150 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 183260845 . A G 1008.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.57;SOR=0.752 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1037,99,0 chr2 183261257 . A G 5056.77 PASS AC=2;AF=1.00;AN=2;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.80;SOR=1.267 GT:AD:DP:GQ:PL 1/1:0,159:159:99:5085,477,0 chr2 183392903 . T A 90.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:118,12,0 chr2 183478675 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 183478693 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 183543714 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 183661361 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 183661443 . T C 88.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:116,12,0 chr2 184387040 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 184524801 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 184540193 . G T 88.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:116,12,0 chr2 184661261 . T C 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr2 184661276 . T C 51.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:79,6,0 chr2 184875288 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 184933777 . A C 1401.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.38;SOR=1.900 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1430,126,0 chr2 184936178 . A T 2085.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.51;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2114,174,0 chr2 184937020 . G A 2304.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.45;SOR=2.437 GT:AD:DP:GQ:PL 1/1:0,53:53:99:2333,160,0 chr2 184937028 . A G 2132.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.29;SOR=2.400 GT:AD:DP:GQ:PL 1/1:0,48:48:99:2161,147,0 chr2 184937516 . C A 863.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.48;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,23:23:69:892,69,0 chr2 184937636 . A G 1455.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.09;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1484,131,0 chr2 185050493 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 185138955 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.26;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 185209718 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 185241664 . C T 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 185291501 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-1.036;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 185291640 . T C 855.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.53;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,30:30:90:884,90,0 chr2 185291674 . T C 814.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.18;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,27:27:81:843,81,0 chr2 185338236 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 185355915 . C A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 185403348 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 185444798 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 185721570 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 185745617 . T G 675.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.699;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.72;ReadPosRankSum=-0.383;SOR=0.479 GT:AD:DP:GQ:PL 0/1:19,24:43:99:704,0,473 chr2 185745661 . G A 238.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.971;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.95;ReadPosRankSum=-1.244;SOR=0.657 GT:AD:DP:GQ:PL 0/1:15,9:24:99:267,0,450 chr2 185746839 . C A 757.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.57;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,24:24:72:786,72,0 chr2 185747107 . A G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.44;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:110,0,30 chr2 185747211 . G A 320.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.935;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=3.132;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.95;ReadPosRankSum=-0.445;SOR=2.147 GT:AD:DP:GQ:PL 0/1:13,10:23:99:349,0,406 chr2 185761043 . A G 315.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.666;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=5.488;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.87;ReadPosRankSum=0.690;SOR=0.190 GT:AD:DP:GQ:PL 0/1:19,13:32:99:344,0,510 chr2 185763216 . T C 721.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.637;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.860;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.14;ReadPosRankSum=-0.437;SOR=0.895 GT:AD:DP:GQ:PL 0/1:44,35:79:99:750,0,1056 chr2 185764464 . T G 178.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.298;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.77;ReadPosRankSum=1.016;SOR=0.790 GT:AD:DP:GQ:PL 0/1:7,7:14:99:216,0,170 chr2 185764622 . G A 126.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.015;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.09;ReadPosRankSum=0.105;SOR=0.804 GT:AD:DP:GQ:PL 0/1:3,6:9:64:155,0,64 chr2 185768798 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 185789865 . A G 279.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.063;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.569;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.19;ReadPosRankSum=0.000;SOR=0.399 GT:AD:DP:GQ:PL 0/1:15,10:25:99:308,0,449 chr2 185790999 . G A 908.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.77;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,25:25:75:937,75,0 chr2 185791930 . C T 288.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.599;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=2.748;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.66;ReadPosRankSum=-1.523;SOR=0.811 GT:AD:DP:GQ:PL 0/1:37,14:51:99:317,0,1039 chr2 185792229 . T C 353.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.245;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=5.777;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.90;ReadPosRankSum=0.604;SOR=0.886 GT:AD:DP:GQ:PL 0/1:43,17:60:99:382,0,1275 chr2 185792362 . C A 453.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.320;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.80;ReadPosRankSum=1.178;SOR=0.638 GT:AD:DP:GQ:PL 0/1:25,17:42:99:482,0,743 chr2 185793329 . G A 552.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.268;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=1.129;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.52;ReadPosRankSum=0.850;SOR=0.955 GT:AD:DP:GQ:PL 0/1:27,21:48:99:581,0,813 chr2 185793711 . C T 682.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.661;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.975;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.19;ReadPosRankSum=0.733;SOR=0.788 GT:AD:DP:GQ:PL 0/1:33,28:61:99:711,0,923 chr2 185793838 . G T 424.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.831;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.324;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.14;ReadPosRankSum=-2.259;SOR=0.960 GT:AD:DP:GQ:PL 0/1:20,15:35:99:453,0,594 chr2 185794632 . G T 500.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.681;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=2.415;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.43;ReadPosRankSum=1.312;SOR=0.940 GT:AD:DP:GQ:PL 0/1:27,21:48:99:529,0,677 chr2 185796946 . A G 555.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.155;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.08;ReadPosRankSum=0.863;SOR=0.693 GT:AD:DP:GQ:PL 0/1:23,23:46:99:584,0,652 chr2 185799746 . T C 288.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.239;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=3.532;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.63;ReadPosRankSum=1.378;SOR=0.252 GT:AD:DP:GQ:PL 0/1:17,13:30:99:317,0,461 chr2 185800236 . C A 520.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.40;ReadPosRankSum=-0.801;SOR=0.741 GT:AD:DP:GQ:PL 0/1:23,19:42:99:549,0,698 chr2 185800705 . G A 1394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.218;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=3.684;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.81;ReadPosRankSum=-0.758;SOR=0.633 GT:AD:DP:GQ:PL 0/1:50,51:101:99:1423,0,1400 chr2 185801097 . A G 696.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.522;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-0.593;SOR=0.569 GT:AD:DP:GQ:PL 0/1:28,28:56:99:725,0,763 chr2 185802394 . T C 1147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.897;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=0.817;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.19;ReadPosRankSum=1.683;SOR=0.799 GT:AD:DP:GQ:PL 0/1:46,41:87:99:1176,0,1190 chr2 185804208 . A G 354.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.198;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.14;ReadPosRankSum=-0.936;SOR=0.951 GT:AD:DP:GQ:PL 0/1:15,12:27:99:383,0,511 chr2 185805377 . A C 1471.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1500,138,0 chr2 185806053 . T A 396.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.895;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=1.685;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.53;ReadPosRankSum=-0.157;SOR=1.204 GT:AD:DP:GQ:PL 0/1:9,15:24:99:425,0,292 chr2 185806252 . T C 1736.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.40;SOR=0.770 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1765,156,0 chr2 185806630 . G A 453.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.936;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=5.188;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.75;ReadPosRankSum=0.253;SOR=1.275 GT:AD:DP:GQ:PL 0/1:16,17:33:99:482,0,501 chr2 185807185 . G A 442.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.602;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=2.578;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.22;ReadPosRankSum=1.532;SOR=0.741 GT:AD:DP:GQ:PL 0/1:30,18:48:99:471,0,836 chr2 185808170 . A G 391.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.207;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.397;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.24;ReadPosRankSum=0.375;SOR=1.051 GT:AD:DP:GQ:PL 0/1:18,14:32:99:420,0,621 chr2 185814160 . T C 631.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.114;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.64;ReadPosRankSum=-0.034;SOR=0.693 GT:AD:DP:GQ:PL 0/1:28,22:50:99:660,0,950 chr2 185831642 . C G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 185832032 . C T 287.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.579;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.99;ReadPosRankSum=0.674;SOR=0.941 GT:AD:DP:GQ:PL 0/1:7,9:16:99:316,0,243 chr2 185833149 . A G 1255.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.39;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1284,120,0 chr2 185876048 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 185892264 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 185892275 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 185896770 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-1.036;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 186154937 . C G 38.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:66,6,0 chr2 186250111 . C T 31.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=15.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:59,6,0 chr2 186434954 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=1.150;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 186500084 . G A 193.84 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.489;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.23;ReadPosRankSum=0.157;SOR=1.402 GT:AD:DP:GQ:PL 0/1:1,7:8:18:222,0,18 chr2 186500151 . A G 226.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.051;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=6.368;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.12;ReadPosRankSum=0.518;SOR=0.053 GT:AD:DP:GQ:PL 0/1:5,10:15:99:255,0,164 chr2 186508419 . G A 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.14;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr2 186555828 . G T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 186590551 . C T 1141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.816;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.92;ReadPosRankSum=0.972;SOR=0.794 GT:AD:DP:GQ:PL 0/1:38,44:82:99:1170,0,914 chr2 186622433 . G A 716.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.371;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.888;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.47;ReadPosRankSum=-0.762;SOR=0.874 GT:AD:DP:GQ:PL 0/1:68,28:96:99:745,0,1761 chr2 186622542 . G T 383.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.655;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.20;ReadPosRankSum=-1.384;SOR=1.292 GT:AD:DP:GQ:PL 0/1:7,12:19:99:412,0,236 chr2 186625644 . T G 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.037;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.16;ReadPosRankSum=-0.475;SOR=0.693 GT:AD:DP:GQ:PL 0/1:12,5:17:99:167,0,455 chr2 186625662 . G T 64.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.253;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.88;ReadPosRankSum=0.967;SOR=0.105 GT:AD:DP:GQ:PL 0/1:8,3:11:99:102,0,327 chr2 186633380 . T C 1409.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.148;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.00;ReadPosRankSum=-0.526;SOR=0.648 GT:AD:DP:GQ:PL 0/1:77,64:141:99:1438,0,1844 chr2 186633527 . T C 350.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.469;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.03;ReadPosRankSum=-1.198;SOR=0.616 GT:AD:DP:GQ:PL 0/1:13,12:25:99:379,0,434 chr2 186636955 . G A 876.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.271;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.86;ReadPosRankSum=-2.347;SOR=0.733 GT:AD:DP:GQ:PL 0/1:29,30:59:99:905,0,886 chr2 186638499 . T C 1156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.876;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=5.994;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.00;ReadPosRankSum=0.635;SOR=0.285 GT:AD:DP:GQ:PL 0/1:42,47:89:99:1185,0,1166 chr2 186640759 . A G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 186654611 . G T 1081.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.201;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=1.982;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.87;ReadPosRankSum=1.327;SOR=0.430 GT:AD:DP:GQ:PL 0/1:36,42:78:99:1110,0,1001 chr2 186663908 . A G 421.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.476;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=3.905;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.06;ReadPosRankSum=0.508;SOR=0.169 GT:AD:DP:GQ:PL 0/1:13,17:30:99:450,0,385 chr2 186664925 . T A 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.00;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 186667283 . G T 1424.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.433;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=1.385;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.79;ReadPosRankSum=0.130;SOR=0.569 GT:AD:DP:GQ:PL 0/1:75,57:132:99:1453,0,1880 chr2 186667690 . G A 4936.77 PASS AC=2;AF=1.00;AN=2;DP=157;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.44;SOR=1.026 GT:AD:DP:GQ:PL 1/1:0,157:157:99:4965,471,0 chr2 186668641 . C T 176.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.78;ReadPosRankSum=-1.319;SOR=0.086 GT:AD:DP:GQ:PL 0/1:9,6:15:99:205,0,331 chr2 186669014 . T C 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 186676005 . G A 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.579;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=-0.507;SOR=0.495 GT:AD:DP:GQ:PL 0/1:9,7:16:99:244,0,316 chr2 186676650 . G A 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.97;ReadPosRankSum=-1.242;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:140,0,143 chr2 186678647 . C T 1703.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.020;ClippingRankSum=0.000;DP=210;ExcessHet=3.0103;FS=2.507;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.607;SOR=0.905 GT:AD:DP:GQ:PL 0/1:133,76:209:99:1732,0,3378 chr2 186694233 . G A 671.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.097;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=3.826;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.58;ReadPosRankSum=-0.239;SOR=1.255 GT:AD:DP:GQ:PL 0/1:33,25:58:99:700,0,897 chr2 186694495 . T G 100.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.381;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.88;ReadPosRankSum=-1.520;SOR=0.954 GT:AD:DP:GQ:PL 0/1:21,5:26:99:129,0,697 chr2 186747021 . G A 858.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.03;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,26:26:78:887,78,0 chr2 186761611 . C T 684.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.112;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=7.686;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.92;ReadPosRankSum=-0.603;SOR=0.475 GT:AD:DP:GQ:PL 0/1:27,26:53:99:713,0,765 chr2 186780828 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 186793035 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 186812184 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 186812188 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 186833310 . G A 419.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.98;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:42:448,42,0 chr2 186848669 . C A 460.77 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.07;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:33:489,33,0 chr2 186848685 . C T 793.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.65;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,19:19:57:822,57,0 chr2 186948587 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 186957625 . T C 187.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.31;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:216,18,0 chr2 186991816 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 187002015 . G A 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.450;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-1.803;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:75:143,0,75 chr2 187030219 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 187352056 . C T 282.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.245;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=1.239;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.44;ReadPosRankSum=-1.015;SOR=0.951 GT:AD:DP:GQ:PL 0/1:21,17:38:99:311,0,628 chr2 187352080 . T C 1373.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.53;SOR=0.829 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1402,135,0 chr2 187359330 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 187363194 . A G 150.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=-0.765;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:179,0,179 chr2 187378906 . A G 378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.621;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.623;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=1.595;SOR=1.179 GT:AD:DP:GQ:PL 0/1:12,13:25:99:407,0,258 chr2 187379213 . T C 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.674;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 187380913 . G A 718.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.37;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,19:19:57:747,57,0 chr2 187467965 . A G 683.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.659;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.52;ReadPosRankSum=-0.109;SOR=0.662 GT:AD:DP:GQ:PL 0/1:36,29:65:99:712,0,1066 chr2 187478770 . T C 998.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.255;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.91;ReadPosRankSum=-1.363;SOR=0.793 GT:AD:DP:GQ:PL 0/1:27,40:67:99:1027,0,607 chr2 187489400 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 187826093 . G A 217.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.33;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:246,18,0 chr2 187846685 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 187846686 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 187951684 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 188002410 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 188002447 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 188002531 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 188012501 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 188012510 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 188072763 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 188154657 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 188157882 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 188157892 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 188166025 . T G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 188166103 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 188166149 . G C 93.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:121,9,0 chr2 188185253 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 188227622 . T C 886.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.534;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=3.596;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.54;ReadPosRankSum=1.654;SOR=1.188 GT:AD:DP:GQ:PL 0/1:29,32:61:99:915,0,653 chr2 188236229 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 188262192 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 188262195 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 188294042 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 188294276 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 188584169 . A T 1496.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.02;SOR=3.365 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1525,126,0 chr2 188611662 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 188730082 . C G 80.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0 chr2 188731367 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 188794216 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 188800233 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 188804581 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 188906958 . G A 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 188984604 . A G 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=0.180;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr2 188985047 . A G 281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=10.942;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.42;ReadPosRankSum=0.788;SOR=2.004 GT:AD:DP:GQ:PL 0/1:12,9:21:99:310,0,438 chr2 188990541 . A G 222.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.14;ReadPosRankSum=-0.119;SOR=0.836 GT:AD:DP:GQ:PL 0/1:6,7:13:99:251,0,211 chr2 188990948 . T A 747.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.561;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=3.945;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.60;ReadPosRankSum=0.433;SOR=0.302 GT:AD:DP:GQ:PL 0/1:22,33:55:99:776,0,549 chr2 188991217 . G A 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr2 188991945 . C T 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-1.520;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,143 chr2 188993267 . T C 1485.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.596;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.08;ReadPosRankSum=0.125;SOR=0.669 GT:AD:DP:GQ:PL 0/1:62,61:123:99:1514,0,1586 chr2 188996670 . T A 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.611;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=4.260;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-0.489;SOR=2.833 GT:AD:DP:GQ:PL 0/1:3,5:8:67:185,0,67 chr2 188997477 . C T 715.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.12;SOR=1.426 GT:AD:DP:GQ:PL 1/1:0,23:23:69:744,69,0 chr2 188998663 . C T 751.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.784;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=2.356;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=1.075;SOR=0.412 GT:AD:DP:GQ:PL 0/1:24,28:52:99:780,0,693 chr2 188999354 . G A 542.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.044;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.20;ReadPosRankSum=-0.815;SOR=0.569 GT:AD:DP:GQ:PL 0/1:37,22:59:99:571,0,993 chr2 189000114 . C T 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr2 189001473 . T A 1864.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.15;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,58:58:99:1893,174,0 chr2 189002479 . G A 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=0.609;SOR=0.495 GT:AD:DP:GQ:PL 0/1:9,7:16:99:244,0,327 chr2 189003118 . T A 289.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.049;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=1.707;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.17;ReadPosRankSum=1.082;SOR=1.179 GT:AD:DP:GQ:PL 0/1:12,10:22:99:318,0,386 chr2 189003156 . C T 183.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.361;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.21;ReadPosRankSum=1.112;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,8:18:99:212,0,295 chr2 189010695 . T G 3277.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.78;SOR=1.284 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3306,299,0 chr2 189034846 . T C 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.712;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-0.180;SOR=0.892 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,150 chr2 189036569 . G A 1372.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.007;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=2.283;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.83;ReadPosRankSum=-0.522;SOR=0.452 GT:AD:DP:GQ:PL 0/1:32,45:77:99:1401,0,869 chr2 189043211 . A G 1364.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.400;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=2.932;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.51;ReadPosRankSum=0.070;SOR=0.835 GT:AD:DP:GQ:PL 0/1:32,56:88:99:1393,0,664 chr2 189053611 . T C 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=1.774;SOR=1.426 GT:AD:DP:GQ:PL 0/1:9,7:16:99:244,0,328 chr2 189054061 . C T 842.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.214;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=1.971;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.87;ReadPosRankSum=-0.627;SOR=0.961 GT:AD:DP:GQ:PL 0/1:41,30:71:99:871,0,1266 chr2 189057547 . T C 125.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.097;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.43;ReadPosRankSum=-1.097;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,6:11:99:154,0,177 chr2 189058378 . A G 1043.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.322;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=1.002;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.30;ReadPosRankSum=0.408;SOR=0.498 GT:AD:DP:GQ:PL 0/1:36,37:73:99:1072,0,979 chr2 189058675 . T C 300.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.843;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.83;ReadPosRankSum=-0.500;SOR=0.859 GT:AD:DP:GQ:PL 0/1:9,10:19:99:329,0,319 chr2 189058708 . A C 358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=1.875;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=1.811;SOR=1.329 GT:AD:DP:GQ:PL 0/1:13,11:24:99:387,0,464 chr2 189060587 . G C 73.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.54;ReadPosRankSum=-1.068;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:102,0,105 chr2 189060822 . T A 852.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.301;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.30;ReadPosRankSum=0.870;SOR=0.582 GT:AD:DP:GQ:PL 0/1:13,29:42:99:881,0,311 chr2 189062780 . C G 413.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.944;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.61;ReadPosRankSum=0.673;SOR=0.804 GT:AD:DP:GQ:PL 0/1:24,15:39:99:442,0,708 chr2 189068105 . T C 2417.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.308;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=1.226;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.83;ReadPosRankSum=-1.633;SOR=0.574 GT:AD:DP:GQ:PL 0/1:78,85:163:99:2446,0,2233 chr2 189071961 . T G 388.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.054;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.48;ReadPosRankSum=0.493;SOR=0.493 GT:AD:DP:GQ:PL 0/1:24,17:41:99:417,0,709 chr2 189080937 . A G 549.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.072;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=2.102;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.21;ReadPosRankSum=1.300;SOR=1.032 GT:AD:DP:GQ:PL 0/1:41,26:67:99:578,0,1030 chr2 189110232 . G T 952.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.879;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=1.157;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.34;ReadPosRankSum=-0.708;SOR=0.492 GT:AD:DP:GQ:PL 0/1:49,35:84:99:981,0,1565 chr2 189110461 . A C 1834.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.173;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=1.568;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.69;ReadPosRankSum=1.431;SOR=0.927 GT:AD:DP:GQ:PL 0/1:69,65:134:99:1863,0,1881 chr2 189311970 . T C 339.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.560;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.13;ReadPosRankSum=1.567;SOR=0.941 GT:AD:DP:GQ:PL 0/1:12,16:28:99:368,0,281 chr2 189448670 . A G 353.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.876;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.83;ReadPosRankSum=-0.190;SOR=0.612 GT:AD:DP:GQ:PL 0/1:21,15:36:99:382,0,633 chr2 189449115 . T C 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=0.000;SOR=0.368 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr2 189455264 . A G 2546.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.42;SOR=2.568 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2575,222,0 chr2 189457470 . T C 218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.623;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=0.253;SOR=0.582 GT:AD:DP:GQ:PL 0/1:8,7:15:99:247,0,272 chr2 189458804 . A G 1514.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.904;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=1.417;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.30;ReadPosRankSum=-0.329;SOR=0.534 GT:AD:DP:GQ:PL 0/1:72,62:134:99:1543,0,1941 chr2 189462350 . C T 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=-0.363;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,262 chr2 189462400 . C G 429.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.216;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=8.215;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.23;ReadPosRankSum=1.212;SOR=2.712 GT:AD:DP:GQ:PL 0/1:28,14:42:99:458,0,903 chr2 189466331 . A G 536.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.436;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.34;ReadPosRankSum=-0.429;SOR=0.182 GT:AD:DP:GQ:PL 0/1:18,17:35:99:565,0,646 chr2 189565451 . A G 6758.77 PASS AC=2;AF=1.00;AN=2;DP=209;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.34;SOR=0.959 GT:AD:DP:GQ:PL 1/1:0,209:209:99:6787,627,0 chr2 189578167 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 189578578 . C T 1006.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.40;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1035,84,0 chr2 189579473 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 189579904 . C G 5591.77 PASS AC=2;AF=1.00;AN=2;DP=185;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.23;SOR=1.172 GT:AD:DP:GQ:PL 1/1:0,185:185:99:5620,554,0 chr2 189580350 . T G 2791.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.05;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2820,246,0 chr2 189583321 . T C 1946.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.42;SOR=1.503 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1975,192,0 chr2 189583826 . T C 729.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.764;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.20;SOR=1.123 GT:AD:DP:GQ:PL 0/1:6,32:38:88:758,0,88 chr2 189661479 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 189661498 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 189666700 . G A 3461.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.94;SOR=0.905 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3490,306,0 chr2 189666889 . T C 716.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.156;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.70;ReadPosRankSum=0.276;SOR=0.770 GT:AD:DP:GQ:PL 0/1:37,30:67:99:745,0,1043 chr2 189670812 . C T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.66;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 189677135 . G T 103.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.024;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.05;ReadPosRankSum=0.227;SOR=0.412 GT:AD:DP:GQ:PL 0/1:24,10:34:99:132,0,817 chr2 189711353 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 189728585 . C G 2709.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.34;SOR=2.155 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2738,231,0 chr2 189730532 . G T 2642.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.09;SOR=1.039 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2671,255,0 chr2 189737787 . T C 2239.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.86;SOR=0.719 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2268,225,0 chr2 189746358 . T C 618.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.996;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.89;ReadPosRankSum=-0.064;SOR=0.593 GT:AD:DP:GQ:PL 0/1:25,23:48:99:647,0,640 chr2 189746688 . T C 1103.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.49;SOR=2.448 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1132,96,0 chr2 189746733 . A G 643.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.96;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,18:18:54:672,54,0 chr2 189750452 . A T 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.60;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 189752917 . A G 3143.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.09;SOR=1.420 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3172,285,0 chr2 189755766 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 189771685 . C G 351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.251;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.13;ReadPosRankSum=0.025;SOR=1.206 GT:AD:DP:GQ:PL 0/1:17,12:29:99:380,0,589 chr2 189775749 . A G 845.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.985;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.953;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.91;ReadPosRankSum=0.840;SOR=0.546 GT:AD:DP:GQ:PL 0/1:36,35:71:99:874,0,972 chr2 189778220 . C T 406.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.49;ReadPosRankSum=0.693;SOR=2.049 GT:AD:DP:GQ:PL 0/1:10,12:22:99:435,0,351 chr2 189778531 . G A 472.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.174;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=2.593;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.28;ReadPosRankSum=-1.356;SOR=0.345 GT:AD:DP:GQ:PL 0/1:25,21:46:99:501,0,633 chr2 189782382 . T C 990.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.82;SOR=3.690 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1019,81,0 chr2 189817906 . G C 160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.86;ReadPosRankSum=2.515;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,6:9:98:189,0,98 chr2 189844256 . C A 312.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.861;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.46;ReadPosRankSum=0.409;SOR=1.179 GT:AD:DP:GQ:PL 0/1:10,9:19:99:341,0,616 chr2 189857617 . T C 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.616;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=0.210;SOR=1.981 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,191 chr2 189923397 . G T 2504.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.349;ClippingRankSum=0.000;DP=223;ExcessHet=3.0103;FS=4.609;MLEAC=1;MLEAF=0.500;MQ=56.83;MQRankSum=0.291;QD=11.28;ReadPosRankSum=1.377;SOR=0.509 GT:AD:DP:GQ:PL 0/1:125,97:222:99:2533,0,3632 chr2 189930620 . C G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 190136339 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 190151766 . C A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-1.036;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 190159073 . G A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 190294506 . A G 1859.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.49;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1888,183,0 chr2 190296896 . T C 2726.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.99;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2755,264,0 chr2 190343248 . G C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 190366481 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 190366547 . C A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.93;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 190366732 . G A 3594.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3623,344,0 chr2 190369464 . C A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 190371175 . A C 7285.77 PASS AC=2;AF=1.00;AN=2;DP=218;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.42;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,218:218:99:7314,654,0 chr2 190378685 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 190436642 . A G 3966.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.49;SOR=1.490 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3995,345,0 chr2 190469698 . G A 91.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:119,9,0 chr2 190489765 . T C 1349.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.272;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=1.408;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.15;ReadPosRankSum=0.495;SOR=0.864 GT:AD:DP:GQ:PL 0/1:72,61:133:99:1378,0,1763 chr2 190499583 . C T 135.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.142;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.05;ReadPosRankSum=0.393;SOR=0.892 GT:AD:DP:GQ:PL 0/1:10,5:15:99:164,0,338 chr2 190509049 . C T 3554.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.39;SOR=2.857 GT:AD:DP:GQ:PL 1/1:0,99:99:99:3583,298,0 chr2 190509317 . C T 878.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.095;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=2.188;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.22;ReadPosRankSum=-1.072;SOR=0.976 GT:AD:DP:GQ:PL 0/1:54,32:86:99:907,0,1598 chr2 190510649 . G A 595.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.81;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:624,45,0 chr2 190510752 . T G 49.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:77,6,0 chr2 190514542 . G A 1448.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.954;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=1.472;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.38;ReadPosRankSum=0.252;SOR=0.555 GT:AD:DP:GQ:PL 0/1:61,56:117:99:1477,0,1537 chr2 190519198 . C G 378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.252;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=4.678;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=1.169;SOR=0.148 GT:AD:DP:GQ:PL 0/1:11,14:25:99:407,0,350 chr2 190525127 . T C 703.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.102;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.35;ReadPosRankSum=-1.984;SOR=0.698 GT:AD:DP:GQ:PL 0/1:31,26:57:99:732,0,902 chr2 190525400 . G A 1361.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.92;SOR=2.362 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1390,117,0 chr2 190534475 . G A 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=0.000;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr2 190534652 . C G 385.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.016;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.41;ReadPosRankSum=-1.176;SOR=0.646 GT:AD:DP:GQ:PL 0/1:24,17:41:99:414,0,641 chr2 190534707 . T C 1058.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.25;SOR=0.749 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1087,105,0 chr2 190670585 . T C 313.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.645;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=2.318;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.26;ReadPosRankSum=0.000;SOR=1.942 GT:AD:DP:GQ:PL 0/1:11,11:22:99:342,0,325 chr2 190680880 . C T 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.71;ReadPosRankSum=0.728;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:256,0,134 chr2 190681095 . A G 705.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.461;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=0.998;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.38;ReadPosRankSum=1.387;SOR=0.979 GT:AD:DP:GQ:PL 0/1:31,31:62:99:734,0,823 chr2 190730812 . T A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 190881507 . T G 491.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.669;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=3.074;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.05;ReadPosRankSum=-0.630;SOR=0.330 GT:AD:DP:GQ:PL 0/1:16,19:35:99:520,0,502 chr2 190902173 . T G 442.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.171;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.45;ReadPosRankSum=1.266;SOR=0.859 GT:AD:DP:GQ:PL 0/1:11,13:24:99:471,0,355 chr2 190924480 . A G 362.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.147;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=1.414;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.99;ReadPosRankSum=1.299;SOR=0.982 GT:AD:DP:GQ:PL 0/1:18,15:33:99:391,0,482 chr2 190953339 . T C 639.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.65;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:668,48,0 chr2 190970870 . T G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=1.282;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 190971827 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 190971836 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 190971945 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 190971964 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 190975250 . C T 999.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.552;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=2.170;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=-0.418;SOR=1.127 GT:AD:DP:GQ:PL 0/1:29,37:66:99:1028,0,797 chr2 190977033 . G A 1098.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.166;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=6.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.46;ReadPosRankSum=-1.484;SOR=0.239 GT:AD:DP:GQ:PL 0/1:37,39:76:99:1127,0,1131 chr2 190977153 . A G 301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.12;ReadPosRankSum=0.152;SOR=1.112 GT:AD:DP:GQ:PL 0/1:6,9:15:99:330,0,205 chr2 190979104 . A G 901.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.522;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=1.119;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.70;ReadPosRankSum=-0.512;SOR=0.470 GT:AD:DP:GQ:PL 0/1:37,34:71:99:930,0,1063 chr2 190983586 . T C 2816.77 PASS AC=2;AF=1.00;AN=2;DP=82;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.35;SOR=2.191 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2845,246,0 chr2 190986759 . C T 519.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.008;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.68;ReadPosRankSum=0.608;SOR=0.582 GT:AD:DP:GQ:PL 0/1:18,20:38:99:548,0,535 chr2 190989697 . T C 265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.253;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=2.596;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.61;ReadPosRankSum=-1.817;SOR=1.802 GT:AD:DP:GQ:PL 0/1:7,9:16:99:294,0,210 chr2 191008827 . A T 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=1.068;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr2 191009941 . A G 837.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.011;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.935;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=2.459;SOR=0.888 GT:AD:DP:GQ:PL 0/1:38,30:68:99:866,0,1076 chr2 191010309 . C T 1741.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.624;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.76;ReadPosRankSum=1.101;SOR=0.751 GT:AD:DP:GQ:PL 0/1:51,67:118:99:1770,0,1341 chr2 191034160 . T C 313.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.86;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:342,27,0 chr2 191034223 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 191058115 . G A 1015.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.77;SOR=0.756 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1044,93,0 chr2 191058300 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 191058338 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 191058817 . G C 400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.387;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=5.656;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.42;ReadPosRankSum=-0.747;SOR=0.061 GT:AD:DP:GQ:PL 0/1:7,16:23:99:429,0,211 chr2 191066738 . A C 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.000;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:146,0,104 chr2 191073398 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 191131536 . G A 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.89;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 191131792 . T C 5124.77 PASS AC=2;AF=1.00;AN=2;DP=158;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.44;SOR=1.451 GT:AD:DP:GQ:PL 1/1:0,158:158:99:5153,474,0 chr2 191221400 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 191230729 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 191257091 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 191276617 . G A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 191296113 . A T 329.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.132;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=9.169;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.42;ReadPosRankSum=-0.331;SOR=2.517 GT:AD:DP:GQ:PL 0/1:23,12:35:99:358,0,718 chr2 191296149 . C T 469.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.240;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=6.592;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.59;ReadPosRankSum=-1.144;SOR=1.773 GT:AD:DP:GQ:PL 0/1:31,18:49:99:498,0,875 chr2 191350107 . A T 673.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.758;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=1.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.31;ReadPosRankSum=-0.424;SOR=1.238 GT:AD:DP:GQ:PL 0/1:22,22:44:99:702,0,653 chr2 191350240 . T C 624.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.927;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=2.453;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.59;ReadPosRankSum=-0.208;SOR=1.112 GT:AD:DP:GQ:PL 0/1:34,25:59:99:653,0,891 chr2 191360568 . A G 798.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.391;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=1.020;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.92;ReadPosRankSum=0.101;SOR=0.533 GT:AD:DP:GQ:PL 0/1:34,33:67:99:827,0,1021 chr2 191362182 . G C 557.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.883;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=4.150;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.45;ReadPosRankSum=-0.776;SOR=2.531 GT:AD:DP:GQ:PL 0/1:10,16:26:99:586,0,305 chr2 191362504 . T C 1052.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.772;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=5.505;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.98;ReadPosRankSum=-0.365;SOR=0.184 GT:AD:DP:GQ:PL 0/1:26,36:62:99:1081,0,832 chr2 191381129 . A T 99.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:127,12,0 chr2 191383082 . A G 518.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.01;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,14:14:42:547,42,0 chr2 191383110 . C T 780.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.94;SOR=3.816 GT:AD:DP:GQ:PL 1/1:0,21:21:63:809,63,0 chr2 191383448 . T A 162.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.58;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:191,15,0 chr2 191385817 . A G 1495.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.44;SOR=3.716 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1524,125,0 chr2 191385842 . T C 2136.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.18;SOR=3.804 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2165,176,0 chr2 191386000 . G A 5439.77 PASS AC=2;AF=1.00;AN=2;DP=162;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.58;SOR=0.718 GT:AD:DP:GQ:PL 1/1:0,162:162:99:5468,486,0 chr2 191386893 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 191387685 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 191388857 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 191388872 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 191391094 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 191398448 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 191406677 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 191408857 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 191414601 . T C 4666.77 PASS AC=2;AF=1.00;AN=2;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.35;SOR=0.757 GT:AD:DP:GQ:PL 1/1:0,159:159:99:4695,477,0 chr2 191542158 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 191836667 . A G 3533.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.13;SOR=1.069 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3562,330,0 chr2 191836891 . A C 1434.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.61;SOR=0.784 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1463,132,0 chr2 191846436 . A C 9668.77 PASS AC=2;AF=1.00;AN=2;DP=287;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.69;SOR=0.865 GT:AD:DP:GQ:PL 1/1:0,287:287:99:9697,862,0 chr2 191881456 . G A 999.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.80;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1028,84,0 chr2 191882009 . T C 3579.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.13;SOR=1.219 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3608,345,0 chr2 191950586 . G C 178.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.00;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:207,15,0 chr2 191950597 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 191955174 . G A 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr2 192057530 . T G 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.30;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 192116154 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 192192011 . C A 1019.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.924;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=0.837;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.00;ReadPosRankSum=-1.184;SOR=0.810 GT:AD:DP:GQ:PL 0/1:45,40:85:99:1048,0,1055 chr2 192265430 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 192413930 . G T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 192473454 . C T 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 192508092 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 192541068 . A C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 192773161 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 193276699 . G C 229.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:258,21,0 chr2 193277046 . G A 660.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.04;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,20:20:60:689,60,0 chr2 193502382 . G A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr2 193502391 . T A 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:78:78,0,87 chr2 193867840 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 193867859 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 194096600 . C A 152.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 194096601 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 194187590 . T C 309.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.98;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,10:10:30:338,30,0 chr2 194187643 . C A 231.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.97;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:260,24,0 chr2 194188352 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 194192209 . T G 425.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.98;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,11:11:33:454,33,0 chr2 194192224 . T C 376.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.82;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,9:9:27:405,27,0 chr2 194192444 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 194337021 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 194796102 . T C 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 195339247 . A G 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr2 195386583 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 195447620 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 195583781 . T A 177.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.725;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=1.740;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.89;ReadPosRankSum=-0.386;SOR=1.179 GT:AD:DP:GQ:PL 0/1:12,8:20:99:206,0,237 chr2 195583917 . G A 252.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.28;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,10:10:30:281,30,0 chr2 195617355 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 195617476 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 195617974 . C G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 195648283 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 195718092 . T C 709.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.08;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:738,54,0 chr2 195754616 . T G 797.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.69;SOR=3.352 GT:AD:DP:GQ:PL 1/1:0,23:23:69:826,69,0 chr2 195771938 . C G 805.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.482;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.596;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.65;ReadPosRankSum=0.707;SOR=0.423 GT:AD:DP:GQ:PL 0/1:14,27:41:99:834,0,427 chr2 195799273 . T C 1379.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.170;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=0.783;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.02;ReadPosRankSum=0.204;SOR=0.544 GT:AD:DP:GQ:PL 0/1:56,50:106:99:1408,0,1593 chr2 195806467 . G A 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.842;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.68;ReadPosRankSum=0.210;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:125,0,221 chr2 195808809 . A G 3856.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.14;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3885,359,0 chr2 195816560 . A T 181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.98;ReadPosRankSum=-1.121;SOR=0.569 GT:AD:DP:GQ:PL 0/1:7,6:13:99:210,0,253 chr2 195817906 . C A 343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.097;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=3.171;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.32;ReadPosRankSum=0.213;SOR=2.303 GT:AD:DP:GQ:PL 0/1:13,11:24:99:372,0,359 chr2 195857817 . C G 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.13;ReadPosRankSum=0.084;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:137,0,65 chr2 195926552 . T G 762.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.091;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=2.619;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.87;ReadPosRankSum=0.366;SOR=0.377 GT:AD:DP:GQ:PL 0/1:28,27:55:99:791,0,834 chr2 195936485 . T C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 195957280 . A G 1423.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.310;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=0.789;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=0.196;SOR=0.795 GT:AD:DP:GQ:PL 0/1:42,53:95:99:1452,0,1062 chr2 195984729 . C T 313.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.906;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.51;ReadPosRankSum=0.392;SOR=0.446 GT:AD:DP:GQ:PL 0/1:20,13:33:99:342,0,634 chr2 195984793 . T C 171.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.178;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=6.864;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=-0.741;SOR=0.053 GT:AD:DP:GQ:PL 0/1:9,8:17:99:200,0,325 chr2 195987187 . G A 146.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.115;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.45;ReadPosRankSum=0.868;SOR=0.446 GT:AD:DP:GQ:PL 0/1:24,9:33:99:175,0,629 chr2 195988163 . C T 517.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.309;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=2.561;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.51;ReadPosRankSum=0.991;SOR=1.034 GT:AD:DP:GQ:PL 0/1:23,22:45:99:546,0,555 chr2 196001696 . C T 3892.77 PASS AC=2;AF=1.00;AN=2;DP=126;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.89;SOR=1.379 GT:AD:DP:GQ:PL 1/1:0,126:126:99:3921,378,0 chr2 196026725 . T C 803.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.784;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.27;ReadPosRankSum=1.277;SOR=0.536 GT:AD:DP:GQ:PL 0/1:19,25:44:99:832,0,627 chr2 196047343 . A G 582.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.276;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.66;ReadPosRankSum=1.039;SOR=0.592 GT:AD:DP:GQ:PL 0/1:27,23:50:99:611,0,740 chr2 196051267 . A G 956.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.702;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=0.919;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.28;ReadPosRankSum=0.283;SOR=0.835 GT:AD:DP:GQ:PL 0/1:30,37:67:99:985,0,660 chr2 196058112 . T A 311.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.427;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.74;ReadPosRankSum=0.919;SOR=0.551 GT:AD:DP:GQ:PL 0/1:18,14:32:99:340,0,451 chr2 196068464 . T C 944.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.066;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=1.817;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.22;ReadPosRankSum=1.107;SOR=1.262 GT:AD:DP:GQ:PL 0/1:8,31:39:99:973,0,217 chr2 196071087 . T C 896.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.042;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=1.009;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.95;ReadPosRankSum=-0.952;SOR=0.521 GT:AD:DP:GQ:PL 0/1:28,32:60:99:925,0,785 chr2 196071266 . T C 220.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.282;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.53;ReadPosRankSum=-0.549;SOR=2.093 GT:AD:DP:GQ:PL 0/1:2,7:9:56:249,0,56 chr2 196139715 . A G 588.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.361;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=5.339;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=0.103;SOR=1.708 GT:AD:DP:GQ:PL 0/1:12,23:35:99:617,0,226 chr2 196143805 . C T 198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.473;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.07;ReadPosRankSum=2.208;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,7:11:99:227,0,134 chr2 196146099 . C T 533.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.68;ReadPosRankSum=-0.889;SOR=0.856 GT:AD:DP:GQ:PL 0/1:13,19:32:99:562,0,347 chr2 196156362 . C T 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.887;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-0.135;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:89:185,0,89 chr2 196156417 . G A 288.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.631;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=2.318;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.75;ReadPosRankSum=0.662;SOR=1.781 GT:AD:DP:GQ:PL 0/1:11,10:21:99:317,0,294 chr2 196156552 . T C 370.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.091;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=4.412;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.89;ReadPosRankSum=0.371;SOR=1.313 GT:AD:DP:GQ:PL 0/1:30,17:47:99:399,0,801 chr2 196156648 . T A 481.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.667;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=2.373;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.45;ReadPosRankSum=0.820;SOR=1.059 GT:AD:DP:GQ:PL 0/1:29,22:51:99:510,0,774 chr2 196163650 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 196171103 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 196196953 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 196201165 . A G 639.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:668,48,0 chr2 196201240 . C A 1611.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.24;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1640,150,0 chr2 196201451 . T G 661.79 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.374;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=6.038;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=28.77;SOR=3.816 GT:AD:DP:GQ:PL 0/1:2,21:23:22:690,0,22 chr2 196219863 . T C 577.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.361;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.12;ReadPosRankSum=-0.147;SOR=0.446 GT:AD:DP:GQ:PL 0/1:8,15:23:99:606,0,377 chr2 196219871 . T C 574.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.231;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.95;ReadPosRankSum=0.420;SOR=0.631 GT:AD:DP:GQ:PL 0/1:9,15:24:99:603,0,399 chr2 196220258 . T C 1084.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.233;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.998;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.86;ReadPosRankSum=-1.201;SOR=0.559 GT:AD:DP:GQ:PL 0/1:33,40:73:99:1113,0,875 chr2 196221099 . C T 154.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.097;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.07;ReadPosRankSum=-0.605;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,6:11:99:183,0,176 chr2 196222438 . A C 96.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.290;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.91;ReadPosRankSum=-1.476;SOR=0.188 GT:AD:DP:GQ:PL 0/1:10,4:14:99:125,0,340 chr2 196226397 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 196228043 . A G 214.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.041;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=2.993;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.34;ReadPosRankSum=-0.680;SOR=1.845 GT:AD:DP:GQ:PL 0/1:14,9:23:99:243,0,451 chr2 196228380 . G A 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=0.366;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,216 chr2 196240205 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 196242035 . T C 1041.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.94;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1070,108,0 chr2 196254005 . C T 3237.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.43;SOR=1.413 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3266,308,0 chr2 196257769 . T G 970.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.939;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.74;ReadPosRankSum=-1.241;SOR=0.617 GT:AD:DP:GQ:PL 0/1:23,35:58:99:999,0,650 chr2 196271082 . T C 241.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.603;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.09;ReadPosRankSum=0.978;SOR=0.512 GT:AD:DP:GQ:PL 0/1:11,9:20:99:270,0,365 chr2 196273929 . G A 1254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.463;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=0.984;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.73;ReadPosRankSum=-0.828;SOR=0.512 GT:AD:DP:GQ:PL 0/1:42,33:75:99:1283,0,2570 chr2 196273930 . C A 1254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.408;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.967;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.51;ReadPosRankSum=-1.066;SOR=0.546 GT:AD:DP:GQ:PL 0/1:42,34:76:99:1283,0,2570 chr2 196306380 . G A 2503.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.88;SOR=5.042 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2532,195,0 chr2 196306451 . C T 7184.77 PASS AC=2;AF=1.00;AN=2;DP=158;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.60;SOR=1.624 GT:AD:DP:GQ:PL 1/1:0,158:158:99:7213,491,0 chr2 196306459 . C T 7639.77 PASS AC=2;AF=1.00;AN=2;DP=177;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.83;SOR=1.479 GT:AD:DP:GQ:PL 1/1:0,177:177:99:7668,533,0 chr2 196308092 . G A 1228.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.12;SOR=2.368 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1257,105,0 chr2 196319597 . C T 9316.77 PASS AC=2;AF=1.00;AN=2;DP=276;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=1.082 GT:AD:DP:GQ:PL 1/1:0,276:276:99:9345,828,0 chr2 196415581 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 196415590 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 196432942 . C T 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr2 196433498 . T C 2704.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,61:61:99:2733,187,0 chr2 196433508 . C T 2488.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.31;SOR=1.651 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2517,169,0 chr2 196593392 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 196593642 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 196598076 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 196598095 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 196601686 . A G 419.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.98;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,14:14:42:448,42,0 chr2 196639821 . C G 3051.77 PASS AC=2;AF=1.00;AN=2;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.14;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,98:98:99:3080,294,0 chr2 196640102 . A G 1356.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.55;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1385,129,0 chr2 196651863 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 196656528 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 196656948 . G T 2096.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.909;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=8.110;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.02;ReadPosRankSum=-0.844;SOR=0.378 GT:AD:DP:GQ:PL 0/1:80,81:161:99:2125,0,2297 chr2 196667013 . C G 96.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.09;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:124,9,0 chr2 196669968 . C T 1660.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.20;SOR=1.371 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1689,165,0 chr2 196680401 . G T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 196701344 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 196719780 . C T 979.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.29;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,25:25:75:1008,75,0 chr2 196729063 . C T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.07;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 196729479 . G C 3988.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.24;SOR=1.169 GT:AD:DP:GQ:PL 1/1:0,120:120:99:4017,360,0 chr2 196731038 . G A 1854.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.00;SOR=1.938 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1883,159,0 chr2 196799797 . A T 1468.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.87;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1497,114,0 chr2 196846063 . T C 593.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.071;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=1.228;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.28;ReadPosRankSum=-0.157;SOR=1.061 GT:AD:DP:GQ:PL 0/1:41,23:64:99:622,0,1167 chr2 196893424 . C T 95.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:123,9,0 chr2 196912865 . C T 3301.77 PASS AC=2;AF=1.00;AN=2;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.39;SOR=2.352 GT:AD:DP:GQ:PL 1/1:0,96:96:99:3330,288,0 chr2 196926954 . A G 88.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:116,12,0 chr2 196927842 . C T 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.29;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 196976767 . T C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 196989299 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 196993405 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.20;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 196995143 . G C 315.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.38;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:344,27,0 chr2 196998123 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 196998179 . T C 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.03;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 196998490 . C T 2303.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.91;SOR=1.931 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2332,210,0 chr2 196999127 . C T 1451.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.57;SOR=2.780 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1480,126,0 chr2 197000272 . A C 571.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=38.08;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,16:16:48:600,48,0 chr2 197001746 . T A 1839.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.07;SOR=1.697 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1868,162,0 chr2 197006084 . A G 769.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.35;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,20:20:60:798,60,0 chr2 197008839 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.45;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 197010241 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 197013860 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 197086891 . C T 134.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:162,12,0 chr2 197090056 . A G 3272.77 PASS AC=2;AF=1.00;AN=2;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.40;SOR=1.935 GT:AD:DP:GQ:PL 1/1:0,101:101:99:3301,303,0 chr2 197121324 . T C 1247.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=1.552 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1276,117,0 chr2 197122140 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 197125221 . T C 1258.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.97;SOR=2.712 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1287,108,0 chr2 197125785 . G A 3416.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.35;SOR=2.546 GT:AD:DP:GQ:PL 1/1:0,91:91:99:3445,274,0 chr2 197126185 . G A 2136.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.910 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2165,180,0 chr2 197136719 . C T 2089.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.73;SOR=2.041 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2118,177,0 chr2 197147180 . G A 2339.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.20;SOR=1.488 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2368,225,0 chr2 197147683 . G T 502.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.87;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:531,39,0 chr2 197162363 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 197186954 . A G 536.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.569;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=1.064;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.13;ReadPosRankSum=0.831;SOR=0.487 GT:AD:DP:GQ:PL 0/1:42,24:66:99:565,0,1274 chr2 197228731 . G A 56.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=14.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:84,12,0 chr2 197263015 . T C 302.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.23;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:36:331,36,0 chr2 197263244 . T C 557.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.99;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,18:18:54:586,54,0 chr2 197263282 . A G 643.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.66;SOR=0.990 GT:AD:DP:GQ:PL 1/1:0,21:21:63:672,63,0 chr2 197310455 . G C 1248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.193;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.47;ReadPosRankSum=0.990;SOR=0.351 GT:AD:DP:GQ:PL 0/1:26,35:61:99:1277,0,889 chr2 197310573 . G C 3714.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.234;ClippingRankSum=0.000;DP=277;ExcessHet=3.0103;FS=7.510;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=-0.090;SOR=0.403 GT:AD:DP:GQ:PL 0/1:137,140:277:99:3743,0,3685 chr2 197350256 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 197393071 . T C 1297.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.576;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=1.478;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.09;ReadPosRankSum=-0.079;SOR=0.821 GT:AD:DP:GQ:PL 0/1:63,54:117:99:1326,0,1752 chr2 197400449 . T A 261.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.932;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.72;ReadPosRankSum=0.138;SOR=1.284 GT:AD:DP:GQ:PL 0/1:16,14:30:99:299,0,444 chr2 197400802 . A G 359.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.374;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=3.630;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.41;ReadPosRankSum=0.683;SOR=1.765 GT:AD:DP:GQ:PL 0/1:16,13:29:99:388,0,448 chr2 197402219 . C T 1004.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.67;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1033,84,0 chr2 197410205 . G A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 197417019 . T C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,101 chr2 197417052 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 197418581 . T C 1346.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.787;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=2.380;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.81;ReadPosRankSum=-0.330;SOR=0.502 GT:AD:DP:GQ:PL 0/1:55,59:114:99:1375,0,1541 chr2 197449209 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 197460266 . A G 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=1.006;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:92:146,0,92 chr2 197497294 . T C 665.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.055;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=5.678;MLEAC=1;MLEAF=0.500;MQ=59.71;MQRankSum=0.951;QD=11.68;ReadPosRankSum=-1.126;SOR=0.224 GT:AD:DP:GQ:PL 0/1:31,26:57:99:694,0,1017 chr2 197500319 . C G 416.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.457;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=1.770;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.03;ReadPosRankSum=0.242;SOR=1.329 GT:AD:DP:GQ:PL 0/1:12,14:26:99:445,0,355 chr2 197515911 . C T 369.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.346;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=2.114;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.41;ReadPosRankSum=0.693;SOR=0.307 GT:AD:DP:GQ:PL 0/1:10,14:24:99:398,0,311 chr2 197644227 . G A 2685.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.914;ClippingRankSum=0.000;DP=269;ExcessHet=3.0103;FS=1.521;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.98;ReadPosRankSum=-0.367;SOR=0.592 GT:AD:DP:GQ:PL 0/1:163,106:269:99:2714,0,4447 chr2 197646362 . G A 720.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.156;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=1.024;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.01;ReadPosRankSum=0.351;SOR=0.895 GT:AD:DP:GQ:PL 0/1:44,28:72:99:749,0,1314 chr2 197661364 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 197778697 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 197778907 . G A 1849.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.184;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.26;ReadPosRankSum=-1.109;SOR=0.646 GT:AD:DP:GQ:PL 0/1:38,49:87:99:1878,0,2221 chr2 197778927 . A G 1908.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.249;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=0.768;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.68;ReadPosRankSum=0.234;SOR=0.553 GT:AD:DP:GQ:PL 0/1:45,52:97:99:1937,0,2362 chr2 197805030 . G C 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.10;ReadPosRankSum=0.319;SOR=0.582 GT:AD:DP:GQ:PL 0/1:3,5:8:67:117,0,67 chr2 197805147 . G C 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=6.990;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=1.559;SOR=0.039 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,125 chr2 197924289 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 198001896 . G A 65.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.158;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.06;ReadPosRankSum=1.352;SOR=1.329 GT:AD:DP:GQ:PL 0/1:9,4:13:94:94,0,269 chr2 198085516 . G A 2184.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.668;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=5.718;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.74;ReadPosRankSum=-0.169;SOR=1.109 GT:AD:DP:GQ:PL 0/1:76,83:159:99:2213,0,2158 chr2 198182110 . C G 137.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:165,12,0 chr2 198469852 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 198629922 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 198630004 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 198693247 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 198713893 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 199308589 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.07;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 199308961 . T G 7863.77 PASS AC=2;AF=1.00;AN=2;DP=243;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.36;SOR=1.542 GT:AD:DP:GQ:PL 1/1:0,243:243:99:7892,729,0 chr2 199380522 . C G 729.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.595;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.60;ReadPosRankSum=-0.049;SOR=0.693 GT:AD:DP:GQ:PL 0/1:25,25:50:99:758,0,719 chr2 199381595 . C T 492.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.036;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=6.012;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.27;ReadPosRankSum=1.016;SOR=0.156 GT:AD:DP:GQ:PL 0/1:28,20:48:99:521,0,919 chr2 199398144 . A G 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.11;ReadPosRankSum=1.368;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:134,0,104 chr2 199433590 . A G 1754.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.41;SOR=2.540 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1783,153,0 chr2 199659594 . G A 394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.641;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=-2.081;SOR=0.709 GT:AD:DP:GQ:PL 0/1:17,14:31:99:423,0,503 chr2 199660021 . G A 1370.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.228;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.32;ReadPosRankSum=-1.695;SOR=0.619 GT:AD:DP:GQ:PL 0/1:36,48:84:99:1399,0,1010 chr2 199760858 . T C 6185.77 PASS AC=2;AF=1.00;AN=2;DP=200;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.24;SOR=1.298 GT:AD:DP:GQ:PL 1/1:0,198:198:99:6214,596,0 chr2 199812902 . C T 352.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.38;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:381,30,0 chr2 199812940 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 199819981 . G T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 199832816 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 199844376 . T C 1322.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.489;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=1.792;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.72;ReadPosRankSum=-0.848;SOR=0.971 GT:AD:DP:GQ:PL 0/1:56,48:104:99:1351,0,1583 chr2 199845983 . T G 355.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.30;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:384,30,0 chr2 199906855 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 199906857 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 199935770 . A G 513.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.17;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:542,39,0 chr2 199955782 . T G 1331.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.48;SOR=1.206 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1360,123,0 chr2 199983171 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 199983267 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 200008108 . T C 162.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.13;ReadPosRankSum=1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:24:191,0,24 chr2 200008219 . C T 1333.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.00;SOR=4.235 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1362,105,0 chr2 200008498 . G T 681.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.637;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=2.019;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.94;ReadPosRankSum=0.374;SOR=0.258 GT:AD:DP:GQ:PL 0/1:14,22:36:99:710,0,443 chr2 200306291 . G C 5245.77 PASS AC=2;AF=1.00;AN=2;DP=158;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.20;SOR=1.717 GT:AD:DP:GQ:PL 1/1:0,158:158:99:5274,473,0 chr2 200306468 . C G 8198.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=2.652;ClippingRankSum=0.000;DP=259;ExcessHet=3.0103;FS=3.006;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.78;ReadPosRankSum=-0.907;SOR=0.133 GT:AD:DP:GQ:PL 1/1:2,256:258:99:8227,748,0 chr2 200306484 . G C 8240.77 PASS AC=2;AF=1.00;AN=2;DP=245;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.64;SOR=0.977 GT:AD:DP:GQ:PL 1/1:0,245:245:99:8269,735,0 chr2 200306632 . T C 2195.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.16;SOR=5.747 GT:AD:DP:GQ:PL 1/1:0,54:54:99:2224,162,0 chr2 200308897 . A G 773.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.855;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=5.517;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.19;ReadPosRankSum=-1.530;SOR=1.839 GT:AD:DP:GQ:PL 0/1:19,26:45:99:802,0,510 chr2 200329556 . C A 1557.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.14;SOR=2.560 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1586,141,0 chr2 200341983 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 200389326 . G C 3582.77 PASS AC=2;AF=1.00;AN=2;DP=119;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.11;SOR=1.059 GT:AD:DP:GQ:PL 1/1:0,119:119:99:3611,356,0 chr2 200389448 . A G 1777.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.75;SOR=2.066 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1806,168,0 chr2 200389554 . A G 167.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.58;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:196,15,0 chr2 200412458 . T C 2852.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.05;SOR=1.338 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2881,267,0 chr2 200455070 . C A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 200507045 . G T 1405.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.133;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=1.365;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.97;ReadPosRankSum=-0.011;SOR=0.820 GT:AD:DP:GQ:PL 0/1:84,57:141:99:1434,0,2278 chr2 200532846 . G A 1170.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.29;SOR=6.804 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1199,87,0 chr2 200532924 . A C 2529.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.62;SOR=1.824 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2558,239,0 chr2 200535194 . G T 290.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.248;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=-0.614;SOR=0.527 GT:AD:DP:GQ:PL 0/1:13,11:24:99:319,0,403 chr2 200535962 . A G 121.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.210;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.53;ReadPosRankSum=0.765;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,5:9:99:150,0,128 chr2 200571832 . A G 653.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.874;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=2.367;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.11;ReadPosRankSum=0.097;SOR=0.412 GT:AD:DP:GQ:PL 0/1:30,24:54:99:682,0,837 chr2 200572325 . A G 983.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.415;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=3.121;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.30;ReadPosRankSum=-0.007;SOR=1.098 GT:AD:DP:GQ:PL 0/1:45,35:80:99:1012,0,1264 chr2 200572611 . T C 1399.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.209;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=0.796;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.73;ReadPosRankSum=-1.035;SOR=0.871 GT:AD:DP:GQ:PL 0/1:45,50:95:99:1428,0,1083 chr2 200575145 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 200586283 . C T 472.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.956;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=5.871;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.33;ReadPosRankSum=-1.440;SOR=2.012 GT:AD:DP:GQ:PL 0/1:17,16:33:99:501,0,441 chr2 200599372 . G C 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=0.842;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr2 200599572 . T C 2028.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.503;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=0.644;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.53;ReadPosRankSum=1.276;SOR=0.622 GT:AD:DP:GQ:PL 0/1:80,70:150:99:2057,0,2171 chr2 200599842 . C T 71.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.97;ReadPosRankSum=0.619;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:100,0,180 chr2 200602009 . T C 185.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.48;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,6:12:99:214,0,214 chr2 200602231 . C G 1833.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.221;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=0.590;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.61;ReadPosRankSum=-0.113;SOR=0.626 GT:AD:DP:GQ:PL 0/1:89,69:158:99:1862,0,2390 chr2 200603156 . G T 354.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.641;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.34;ReadPosRankSum=-1.272;SOR=1.061 GT:AD:DP:GQ:PL 0/1:3,11:14:83:383,0,83 chr2 200604321 . T A 378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.252;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=2.187;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=-0.207;SOR=0.260 GT:AD:DP:GQ:PL 0/1:11,14:25:99:407,0,350 chr2 200608951 . G A 1200.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.304;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.29;ReadPosRankSum=0.780;SOR=0.836 GT:AD:DP:GQ:PL 0/1:42,42:84:99:1229,0,1251 chr2 200609456 . C T 725.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.707;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.880;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.30;ReadPosRankSum=0.681;SOR=0.893 GT:AD:DP:GQ:PL 0/1:47,31:78:99:754,0,1196 chr2 200611736 . G A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:72,0,71 chr2 200613505 . A G 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=-0.967;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,137 chr2 200613541 . G A 373.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.355;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=4.260;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.36;ReadPosRankSum=0.638;SOR=2.670 GT:AD:DP:GQ:PL 0/1:6,10:16:99:402,0,303 chr2 200613563 . T C 446.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.389;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.31;ReadPosRankSum=0.242;SOR=0.582 GT:AD:DP:GQ:PL 0/1:9,13:22:99:475,0,411 chr2 200614173 . G A 73.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.294;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=2.920;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.67;ReadPosRankSum=0.304;SOR=0.105 GT:AD:DP:GQ:PL 0/1:8,5:13:99:102,0,238 chr2 200614214 . T G 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=0.000;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr2 200616069 . C T 1153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.429;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=1.700;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.14;ReadPosRankSum=0.168;SOR=0.527 GT:AD:DP:GQ:PL 0/1:49,46:95:99:1182,0,1349 chr2 200621024 . G T 971.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.088;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=2.469;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.50;ReadPosRankSum=1.666;SOR=1.112 GT:AD:DP:GQ:PL 0/1:35,32:67:99:1000,0,937 chr2 200621107 . G A 1791.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.469;ClippingRankSum=0.000;DP=137;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.08;ReadPosRankSum=0.494;SOR=0.677 GT:AD:DP:GQ:PL 0/1:65,72:137:99:1820,0,1642 chr2 200624035 . 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G A 354.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.350;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.23;ReadPosRankSum=0.592;SOR=0.941 GT:AD:DP:GQ:PL 0/1:15,14:29:99:383,0,437 chr2 200669413 . C T 251.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=-0.089;SOR=0.512 GT:AD:DP:GQ:PL 0/1:10,8:18:99:280,0,364 chr2 200669666 . A G 2712.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.062;ClippingRankSum=0.000;DP=209;ExcessHet=3.0103;FS=2.371;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=0.330;SOR=0.833 GT:AD:DP:GQ:PL 0/1:99,108:207:99:2741,0,2541 chr2 200670352 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 200670923 . C T 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.38;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 200676898 . C T 2917.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.275;ClippingRankSum=0.000;DP=203;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.37;ReadPosRankSum=1.962;SOR=0.682 GT:AD:DP:GQ:PL 0/1:92,111:203:99:2946,0,2314 chr2 200725368 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 200739713 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 200739718 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 200817489 . T A 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-0.414;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr2 200821399 . T C 563.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.160;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=4.346;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.84;ReadPosRankSum=0.845;SOR=1.445 GT:AD:DP:GQ:PL 0/1:30,22:52:99:592,0,770 chr2 200821943 . C T 1439.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.65;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1468,120,0 chr2 200844706 . A G 166.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.366;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.83;ReadPosRankSum=-0.180;SOR=1.108 GT:AD:DP:GQ:PL 0/1:1,6:7:21:195,0,21 chr2 200853187 . T G 85.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.25;ReadPosRankSum=0.652;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:114,0,105 chr2 200855193 . A G 299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.723;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=3.074;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.49;ReadPosRankSum=1.338;SOR=2.007 GT:AD:DP:GQ:PL 0/1:14,10:24:99:328,0,466 chr2 200857059 . C T 274.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.832;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.14;ReadPosRankSum=0.718;SOR=1.802 GT:AD:DP:GQ:PL 0/1:4,9:13:94:303,0,94 chr2 200858104 . C A 414.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.321;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.36;ReadPosRankSum=-1.509;SOR=0.580 GT:AD:DP:GQ:PL 0/1:12,15:27:99:443,0,352 chr2 200887928 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:74:81,0,74 chr2 200887929 . C A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:74:81,0,74 chr2 200899143 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 200925716 . G C 260.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.38;ReadPosRankSum=1.087;SOR=0.818 GT:AD:DP:GQ:PL 0/1:7,8:15:99:289,0,247 chr2 200941282 . A G 1322.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.830;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.07;ReadPosRankSum=0.182;SOR=0.612 GT:AD:DP:GQ:PL 0/1:47,47:94:99:1351,0,1204 chr2 200983163 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 201063762 . A G 1180.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.73;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1209,102,0 chr2 201079546 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 201160408 . G A 5512.77 PASS AC=2;AF=1.00;AN=2;DP=173;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.24;SOR=1.475 GT:AD:DP:GQ:PL 1/1:0,171:171:99:5541,510,0 chr2 201160763 . G A 4756.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=365;ExcessHet=3.0103;FS=0.380;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.03;ReadPosRankSum=0.633;SOR=0.653 GT:AD:DP:GQ:PL 0/1:190,175:365:99:4785,0,5108 chr2 201258272 . A G 1311.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.095;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=3.198;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.01;ReadPosRankSum=-0.447;SOR=0.933 GT:AD:DP:GQ:PL 0/1:76,55:131:99:1340,0,2024 chr2 201283680 . A C 68.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:96,9,0 chr2 201286677 . G A 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.11;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr2 201307739 . T C 171.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.843;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=6.245;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=0.743;SOR=3.003 GT:AD:DP:GQ:PL 0/1:11,6:17:99:200,0,272 chr2 201348338 . C G 561.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.324;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=6.663;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.04;ReadPosRankSum=1.141;SOR=2.105 GT:AD:DP:GQ:PL 0/1:23,17:40:99:590,0,651 chr2 201350769 . C G 691.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.258;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=3.154;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.35;ReadPosRankSum=0.438;SOR=0.407 GT:AD:DP:GQ:PL 0/1:43,31:74:99:720,0,1199 chr2 201351096 . T C 409.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.51;ReadPosRankSum=-0.791;SOR=0.990 GT:AD:DP:GQ:PL 0/1:9,12:21:99:438,0,313 chr2 201378238 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 201380521 . A G 1509.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.084;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=2.076;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.35;ReadPosRankSum=1.383;SOR=0.999 GT:AD:DP:GQ:PL 0/1:37,50:87:99:1538,0,1079 chr2 201381232 . A G 1132.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.650;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.42;ReadPosRankSum=0.176;SOR=0.689 GT:AD:DP:GQ:PL 0/1:30,39:69:99:1161,0,1125 chr2 201381311 . G C 297.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.304;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.67;ReadPosRankSum=-2.338;SOR=0.223 GT:AD:DP:GQ:PL 0/1:9,10:19:99:326,0,319 chr2 201384065 . T C 1394.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.089;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=2.872;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.04;ReadPosRankSum=0.691;SOR=1.014 GT:AD:DP:GQ:PL 0/1:59,48:107:99:1423,0,1732 chr2 201384256 . T A 1267.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.467;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=1.950;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.57;ReadPosRankSum=-1.315;SOR=0.455 GT:AD:DP:GQ:PL 0/1:38,49:87:99:1296,0,1121 chr2 201393207 . C A 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.84;ReadPosRankSum=0.026;SOR=0.976 GT:AD:DP:GQ:PL 0/1:6,8:14:99:292,0,208 chr2 201395326 . G A 3051.77 PASS AC=2;AF=1.00;AN=2;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.83;SOR=1.090 GT:AD:DP:GQ:PL 1/1:0,99:99:99:3080,297,0 chr2 201397703 . C T 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.189;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr2 201399433 . C T 1975.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.189;ClippingRankSum=0.000;DP=201;ExcessHet=3.0103;FS=0.522;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.83;ReadPosRankSum=0.354;SOR=0.740 GT:AD:DP:GQ:PL 0/1:119,82:201:99:2004,0,3137 chr2 201399593 . C T 579.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.787;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=6.066;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.80;ReadPosRankSum=1.275;SOR=2.560 GT:AD:DP:GQ:PL 0/1:24,18:42:99:608,0,773 chr2 201407268 . T C 325.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.100;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.29;ReadPosRankSum=-0.933;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,10:20:99:354,0,322 chr2 201407309 . T A 674.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.243;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.74;ReadPosRankSum=-0.350;SOR=0.927 GT:AD:DP:GQ:PL 0/1:16,20:36:99:703,0,556 chr2 201410586 . A G 602.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.563;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=3.093;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.07;ReadPosRankSum=1.126;SOR=0.269 GT:AD:DP:GQ:PL 0/1:18,22:40:99:631,0,530 chr2 201410971 . C A 638.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.433;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=3.217;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.21;ReadPosRankSum=-0.199;SOR=0.250 GT:AD:DP:GQ:PL 0/1:17,25:42:99:667,0,482 chr2 201420377 . A G 2888.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.31;SOR=3.316 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2917,234,0 chr2 201443863 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 201473007 . A G 853.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.49;SOR=1.382 GT:AD:DP:GQ:PL 1/1:0,28:28:84:882,84,0 chr2 201477679 . G T 3521.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.078;ClippingRankSum=0.000;DP=269;ExcessHet=3.0103;FS=5.346;MLEAC=1;MLEAF=0.500;MQ=55.43;MQRankSum=0.355;QD=13.09;ReadPosRankSum=1.140;SOR=1.033 GT:AD:DP:GQ:PL 0/1:143,126:269:99:3550,0,4017 chr2 201478014 . A G 435.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.686;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=6.923;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.75;ReadPosRankSum=0.548;SOR=1.492 GT:AD:DP:GQ:PL 0/1:8,13:21:99:464,0,267 chr2 201487926 . A G 588.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.99;ReadPosRankSum=-1.135;SOR=0.892 GT:AD:DP:GQ:PL 0/1:14,17:31:99:617,0,491 chr2 201493226 . A C 909.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=1.460 GT:AD:DP:GQ:PL 1/1:0,29:29:87:938,87,0 chr2 201494434 . A G 614.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.166;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=5.257;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.76;ReadPosRankSum=-1.030;SOR=0.571 GT:AD:DP:GQ:PL 0/1:39,24:63:99:643,0,1257 chr2 201545424 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 201545577 . A T 205.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.31;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:234,18,0 chr2 201582286 . C T 597.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.55;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:626,45,0 chr2 201603413 . T A 806.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.56;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,20:20:60:835,60,0 chr2 201604638 . C T 1157.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.69;SOR=0.743 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1186,117,0 chr2 201604749 . A G 355.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.56;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:384,30,0 chr2 201604810 . T G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 201627272 . G A 4173.77 PASS AC=2;AF=1.00;AN=2;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.61;SOR=1.628 GT:AD:DP:GQ:PL 1/1:0,128:128:99:4202,383,0 chr2 201629220 . T C 1235.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.232;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=1.029;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.48;ReadPosRankSum=-0.022;SOR=0.978 GT:AD:DP:GQ:PL 0/1:32,43:75:99:1264,0,804 chr2 201640822 . G A 535.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.059;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.435;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.07;ReadPosRankSum=0.284;SOR=1.167 GT:AD:DP:GQ:PL 0/1:21,20:41:99:564,0,594 chr2 201641017 . T A 1348.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.58;SOR=1.730 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1377,117,0 chr2 201658824 . A G 95.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:123,12,0 chr2 201670670 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 201678787 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 201680507 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 201680520 . T C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 201681390 . T C 2351.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.58;SOR=3.007 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2380,203,0 chr2 201684746 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 201684823 . G A 259.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:288,24,0 chr2 201684903 . A G 637.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.78;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,16:16:48:666,48,0 chr2 201684943 . A C 1175.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.59;SOR=2.649 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1204,104,0 chr2 201685360 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 201690409 . T C 1866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.976;ClippingRankSum=0.000;DP=120;ExcessHet=3.0103;FS=0.715;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=-1.205;SOR=0.808 GT:AD:DP:GQ:PL 0/1:51,69:120:99:1895,0,1204 chr2 201692979 . C T 6430.77 PASS AC=2;AF=1.00;AN=2;DP=199;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.32;SOR=1.106 GT:AD:DP:GQ:PL 1/1:0,199:199:99:6459,597,0 chr2 201693181 . C T 772.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.57;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,20:20:60:801,60,0 chr2 201697726 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 201702018 . T C 396.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.69;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:425,33,0 chr2 201704931 . C A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.10;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 201705269 . A T 2493.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.70;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,74:74:99:2522,222,0 chr2 201705509 . A G 788.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.41;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,22:22:66:817,66,0 chr2 201710102 . C T 418.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.98;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:447,33,0 chr2 201711098 . G A 3704.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.22;SOR=1.121 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3733,345,0 chr2 201711184 . A G 1962.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.38;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1991,162,0 chr2 201715545 . T C 172.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.81;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:201,18,0 chr2 201715647 . G A 1038.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.46;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1067,84,0 chr2 201718409 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.842;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 201729316 . A G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.41;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 201733390 . C T 1141.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.58;SOR=1.085 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1170,102,0 chr2 201738424 . A G 231.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.97;SOR=1.863 GT:AD:DP:GQ:PL 1/1:0,8:8:24:260,24,0 chr2 201741470 . C T 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.39;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr2 201741916 . G A 963.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.23;SOR=2.546 GT:AD:DP:GQ:PL 1/1:0,29:29:87:992,87,0 chr2 201744154 . C A 1677.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.24;SOR=2.655 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1706,147,0 chr2 201749496 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 201760892 . C T 3880.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.17;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3909,350,0 chr2 201808335 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 201823467 . A G 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.02;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 201823570 . A G 1095.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.12;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1124,93,0 chr2 201829829 . T C 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 201843908 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 201847372 . A C 4388.77 PASS AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.69;SOR=1.302 GT:AD:DP:GQ:PL 1/1:0,143:143:99:4417,427,0 chr2 201872121 . G T 378.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.081;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=4.175;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.14;ReadPosRankSum=0.794;SOR=0.084 GT:AD:DP:GQ:PL 0/1:21,13:34:99:407,0,763 chr2 201876341 . G A 1630.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.387;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.17;ReadPosRankSum=0.669;SOR=0.478 GT:AD:DP:GQ:PL 0/1:46,49:95:99:1659,0,1506 chr2 201876533 . A T 16058.77 PASS AC=2;AF=1.00;AN=2;DP=368;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.70;SOR=0.715 GT:AD:DP:GQ:PL 1/1:0,368:368:99:16087,1116,0 chr2 201876546 . G A 15729.77 PASS AC=2;AF=1.00;AN=2;DP=352;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=36.27;SOR=0.819 GT:AD:DP:GQ:PL 1/1:0,351:351:99:15758,1086,0 chr2 201923804 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 202034208 . A G 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr2 202036512 . C T 1221.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.040;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=4.537;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.08;ReadPosRankSum=-1.930;SOR=0.183 GT:AD:DP:GQ:PL 0/1:39,37:76:99:1250,0,1362 chr2 202036556 . G T 380.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.300;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=2.515;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.60;ReadPosRankSum=-1.415;SOR=0.191 GT:AD:DP:GQ:PL 0/1:16,12:28:99:409,0,549 chr2 202061678 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 202074931 . T C 1911.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.872;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.87;ReadPosRankSum=-0.253;SOR=0.658 GT:AD:DP:GQ:PL 0/1:88,73:161:99:1940,0,2336 chr2 202075113 . G C 1404.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.016;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=2.384;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.15;ReadPosRankSum=0.154;SOR=0.954 GT:AD:DP:GQ:PL 0/1:73,53:126:99:1433,0,1934 chr2 202090731 . G C 2884.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.662;ClippingRankSum=0.000;DP=242;ExcessHet=3.0103;FS=0.483;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.92;ReadPosRankSum=0.332;SOR=0.628 GT:AD:DP:GQ:PL 0/1:136,106:242:99:2913,0,3815 chr2 202097235 . C T 421.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=5.315;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.81;ReadPosRankSum=0.437;SOR=3.334 GT:AD:DP:GQ:PL 0/1:5,12:17:99:450,0,158 chr2 202097635 . G C 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.489;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.10;ReadPosRankSum=-0.414;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:173,0,101 chr2 202099464 . C T 183.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.42;ReadPosRankSum=0.000;SOR=1.402 GT:AD:DP:GQ:PL 0/1:3,6:9:98:212,0,98 chr2 202099657 . G A 1786.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.031;ClippingRankSum=0.000;DP=153;ExcessHet=3.0103;FS=2.058;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=-1.419;SOR=0.533 GT:AD:DP:GQ:PL 0/1:83,70:153:99:1815,0,2261 chr2 202099805 . T C 2256.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.535;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=7.329;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=-0.063;SOR=0.345 GT:AD:DP:GQ:PL 0/1:65,84:149:99:2285,0,1800 chr2 202100263 . C A 1118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.515;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.43;ReadPosRankSum=-0.594;SOR=0.604 GT:AD:DP:GQ:PL 0/1:45,45:90:99:1147,0,1287 chr2 202100499 . A G 1868.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.231;ClippingRankSum=0.000;DP=132;ExcessHet=3.0103;FS=1.440;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.16;ReadPosRankSum=0.023;SOR=0.861 GT:AD:DP:GQ:PL 0/1:64,68:132:99:1897,0,1773 chr2 202100637 . C T 447.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.302;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=2.187;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.91;ReadPosRankSum=0.822;SOR=0.260 GT:AD:DP:GQ:PL 0/1:11,14:25:99:476,0,350 chr2 202105527 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 202109742 . G A 887.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.869;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=2.101;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.33;ReadPosRankSum=-0.439;SOR=1.067 GT:AD:DP:GQ:PL 0/1:32,40:72:99:916,0,783 chr2 202125019 . G A 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.917;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=3.123;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.91;ReadPosRankSum=-1.030;SOR=2.030 GT:AD:DP:GQ:PL 0/1:8,5:13:99:170,0,261 chr2 202125464 . A G 2234.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.13;SOR=1.903 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2263,177,0 chr2 202125471 . C T 470.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.204;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=1.134;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.98;ReadPosRankSum=2.433;SOR=0.481 GT:AD:DP:GQ:PL 0/1:37,22:59:99:499,0,1064 chr2 202125930 . G A 490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.096;ClippingRankSum=0.000;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.91;ReadPosRankSum=1.022;SOR=0.743 GT:AD:DP:GQ:PL 0/1:27,18:45:99:519,0,860 chr2 202160526 . C G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 202163406 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 202165228 . T A 2497.77 PASS AC=2;AF=1.00;AN=2;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.87;SOR=2.012 GT:AD:DP:GQ:PL 1/1:0,76:76:99:2526,228,0 chr2 202185027 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 202187163 . C T 2085.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.02;SOR=2.644 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2114,174,0 chr2 202193510 . T C 855.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.019;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.19;ReadPosRankSum=0.237;SOR=0.612 GT:AD:DP:GQ:PL 0/1:49,35:84:99:884,0,1285 chr2 202193900 . C T 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.69;ReadPosRankSum=0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:59:59,0,72 chr2 202194138 . A G 1608.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.860;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=0.651;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.41;ReadPosRankSum=1.206;SOR=0.806 GT:AD:DP:GQ:PL 0/1:80,61:141:99:1637,0,2138 chr2 202201563 . G T 3824.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=57.16;QD=31.87;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3853,360,0 chr2 202207970 . A G 74.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.501;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=2.808;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.48;ReadPosRankSum=0.084;SOR=1.472 GT:AD:DP:GQ:PL 0/1:6,4:10:99:103,0,221 chr2 202213804 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 202214584 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.15;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 202235618 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 202266218 . G A 770.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.39;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:799,60,0 chr2 202272446 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 202276273 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 202287632 . G A 1166.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.816;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=7.227;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.23;ReadPosRankSum=-0.142;SOR=0.223 GT:AD:DP:GQ:PL 0/1:21,43:64:99:1195,0,568 chr2 202290195 . A C 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-1.282;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr2 202290230 . G A 277.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.605;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.15;ReadPosRankSum=0.891;SOR=0.818 GT:AD:DP:GQ:PL 0/1:3,9:12:89:306,0,89 chr2 202291466 . A G 193.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.11;ReadPosRankSum=-0.214;SOR=0.340 GT:AD:DP:GQ:PL 0/1:10,6:16:99:222,0,764 chr2 202291470 . T G 193.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.904;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.11;ReadPosRankSum=-0.214;SOR=0.340 GT:AD:DP:GQ:PL 0/1:10,6:16:99:222,0,764 chr2 202291561 . C G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=-1.383;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:72:72,0,72 chr2 202297187 . G A 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=0.431;SOR=0.527 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr2 202336237 . G A 567.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.367;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=2.066;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.66;ReadPosRankSum=0.666;SOR=0.223 GT:AD:DP:GQ:PL 0/1:6,18:24:99:596,0,178 chr2 202365969 . T C 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr2 202365990 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 202366019 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 202368302 . C G 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=-0.431;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:63,0,33 chr2 202414979 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 202420974 . C G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 202426381 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 202441430 . T C 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.80;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:31:81,0,31 chr2 202441520 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 202465807 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 202488724 . T C 80.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.54;ReadPosRankSum=-0.566;SOR=1.022 GT:AD:DP:GQ:PL 0/1:3,4:7:99:109,0,104 chr2 202532477 . T C 873.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.009;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=2.987;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.32;ReadPosRankSum=0.887;SOR=1.898 GT:AD:DP:GQ:PL 0/1:35,26:61:99:902,0,1198 chr2 202553060 . T A 114.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.242;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-0.180;SOR=1.981 GT:AD:DP:GQ:PL 0/1:4,4:8:99:143,0,109 chr2 202556759 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 202559611 . G A 299.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.209;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.27;ReadPosRankSum=1.529;SOR=0.804 GT:AD:DP:GQ:PL 0/1:10,11:21:99:328,0,286 chr2 202568215 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 202568224 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 202575568 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 202635000 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.41;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 202737826 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 202757033 . C T 313.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.234;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=3.362;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.51;ReadPosRankSum=-0.430;SOR=0.275 GT:AD:DP:GQ:PL 0/1:20,13:33:99:342,0,566 chr2 202757077 . A C 406.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.298;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=2.676;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.30;ReadPosRankSum=0.361;SOR=0.317 GT:AD:DP:GQ:PL 0/1:31,18:49:99:435,0,822 chr2 202765121 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 202765296 . T G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.524;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 202786564 . A C 710.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.105;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=3.023;MLEAC=1;MLEAF=0.500;MQ=59.94;MQRankSum=-0.941;QD=13.94;ReadPosRankSum=-0.452;SOR=1.279 GT:AD:DP:GQ:PL 0/1:25,26:51:99:739,0,786 chr2 202797056 . A G 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.177;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.99;ReadPosRankSum=1.067;SOR=0.346 GT:AD:DP:GQ:PL 0/1:13,8:21:99:259,0,480 chr2 202825664 . G A 558.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.97;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,15:15:45:587,45,0 chr2 202828836 . C G 772.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.061;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=4.694;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.73;ReadPosRankSum=0.225;SOR=0.802 GT:AD:DP:GQ:PL 0/1:42,30:72:99:801,0,1107 chr2 202840358 . G A 82.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.068;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.28;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:111,0,145 chr2 202841064 . G C 904.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.508;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.998;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=-0.039;SOR=0.941 GT:AD:DP:GQ:PL 0/1:26,34:60:99:933,0,701 chr2 202841386 . G A 459.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.884;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.344;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.14;ReadPosRankSum=-1.379;SOR=1.112 GT:AD:DP:GQ:PL 0/1:19,16:35:99:488,0,435 chr2 202883871 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.189;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr2 202911314 . G C 2309.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.136;ClippingRankSum=0.000;DP=145;ExcessHet=3.0103;FS=0.712;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.93;ReadPosRankSum=-0.424;SOR=0.587 GT:AD:DP:GQ:PL 0/1:66,79:145:99:2338,0,1899 chr2 202918286 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 202955552 . T C 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=0.000;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr2 203016111 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 203016269 . T C 1552.77 PASS AC=2;AF=1.00;AN=2;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=3.516 GT:AD:DP:GQ:PL 1/1:0,45:45:99:1581,134,0 chr2 203056547 . A G 1882.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.38;SOR=1.460 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1911,180,0 chr2 203056725 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 203077905 . T C 913.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.671;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=2.768;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.03;ReadPosRankSum=0.133;SOR=0.352 GT:AD:DP:GQ:PL 0/1:23,34:57:99:942,0,721 chr2 203131927 . T C 793.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.213;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=3.322;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=1.754;SOR=1.609 GT:AD:DP:GQ:PL 0/1:26,26:52:99:822,0,759 chr2 203132147 . A G 2521.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.33;SOR=2.073 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2550,233,0 chr2 203136214 . G A 1525.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.964;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.750;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.38;ReadPosRankSum=-0.239;SOR=0.609 GT:AD:DP:GQ:PL 0/1:54,60:114:99:1554,0,1533 chr2 203137001 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 203138086 . A C 176.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.78;ReadPosRankSum=-0.386;SOR=0.399 GT:AD:DP:GQ:PL 0/1:9,6:15:99:205,0,319 chr2 203156241 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 203157532 . C T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.28;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 203175483 . G A 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.589;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-0.508;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,150 chr2 203190111 . G A 500.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.412;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.04;ReadPosRankSum=0.751;SOR=0.399 GT:AD:DP:GQ:PL 0/1:3,17:20:66:529,0,66 chr2 203190718 . C A 131.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.07;MQRankSum=-1.282;QD=26.35;ReadPosRankSum=-1.282;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:62:160,0,62 chr2 203190720 . A C 131.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.07;MQRankSum=-1.282;QD=26.35;ReadPosRankSum=-1.282;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:62:160,0,62 chr2 203190761 . A G 139.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.981;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=5.441;MLEAC=1;MLEAF=0.500;MQ=43.27;MQRankSum=-1.981;QD=19.97;ReadPosRankSum=1.068;SOR=3.611 GT:AD:DP:GQ:PL 0/1:2,5:7:28:168,0,28 chr2 203190788 . G C 171.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.23;MQRankSum=-2.200;QD=19.09;ReadPosRankSum=1.025;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,7:9:67:200,0,67 chr2 203190807 . A G 209.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.483;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.31;MQRankSum=-3.195;QD=16.14;ReadPosRankSum=1.047;SOR=0.569 GT:AD:DP:GQ:PL 0/1:4,9:13:99:238,0,145 chr2 203190861 . C T 421.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.219;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.09;MQRankSum=-2.848;QD=28.12;ReadPosRankSum=-0.131;SOR=1.270 GT:AD:DP:GQ:PL 0/1:4,11:15:99:450,0,160 chr2 203190869 . C G 421.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.172;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.69;MQRankSum=-2.779;QD=30.13;ReadPosRankSum=-0.637;SOR=1.085 GT:AD:DP:GQ:PL 0/1:4,10:14:99:450,0,160 chr2 203190878 . C T 413.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.172;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.43;MQRankSum=-2.779;QD=29.55;ReadPosRankSum=0.424;SOR=0.693 GT:AD:DP:GQ:PL 0/1:4,10:14:99:442,0,160 chr2 203190881 . C T 413.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.276;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.15;MQRankSum=-2.825;QD=27.58;ReadPosRankSum=0.327;SOR=0.859 GT:AD:DP:GQ:PL 0/1:4,11:15:99:442,0,160 chr2 203190896 . A G 463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.483;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.14;MQRankSum=-2.867;QD=28.99;ReadPosRankSum=0.972;SOR=1.022 GT:AD:DP:GQ:PL 0/1:4,12:16:99:492,0,157 chr2 203190899 . A G 463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.650;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.14;MQRankSum=-2.867;QD=28.99;ReadPosRankSum=0.728;SOR=1.022 GT:AD:DP:GQ:PL 0/1:4,12:16:99:492,0,157 chr2 203190902 . G A 463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.207;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.14;MQRankSum=-2.867;QD=28.99;ReadPosRankSum=0.789;SOR=1.022 GT:AD:DP:GQ:PL 0/1:4,12:16:99:492,0,157 chr2 203190926 . A T 505.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.196;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=5.315;MLEAC=1;MLEAF=0.500;MQ=40.02;MQRankSum=-2.852;QD=29.75;ReadPosRankSum=0.906;SOR=0.916 GT:AD:DP:GQ:PL 0/1:4,13:17:99:534,0,129 chr2 203190929 . G C 505.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.196;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=5.315;MLEAC=1;MLEAF=0.500;MQ=40.02;MQRankSum=-2.852;QD=29.75;ReadPosRankSum=0.906;SOR=0.916 GT:AD:DP:GQ:PL 0/1:4,13:17:99:534,0,129 chr2 203190944 . C T 466.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.917;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.45;MQRankSum=-1.626;QD=31.12;ReadPosRankSum=0.217;SOR=0.582 GT:AD:DP:GQ:PL 0/1:3,12:15:90:495,0,90 chr2 203190947 . G C 466.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.917;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.45;MQRankSum=-1.626;QD=31.12;ReadPosRankSum=0.072;SOR=0.582 GT:AD:DP:GQ:PL 0/1:3,12:15:90:495,0,90 chr2 203190950 . G A 466.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.917;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.45;MQRankSum=-1.626;QD=31.12;ReadPosRankSum=0.072;SOR=0.582 GT:AD:DP:GQ:PL 0/1:3,12:15:90:495,0,90 chr2 203190971 . T C 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.718;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.12;MQRankSum=-1.536;QD=14.83;ReadPosRankSum=0.481;SOR=0.569 GT:AD:DP:GQ:PL 0/1:4,9:13:99:221,0,121 chr2 203191013 . T A 160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=40.07;MQRankSum=-0.792;QD=17.86;ReadPosRankSum=-1.180;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,6:9:52:189,0,52 chr2 203191040 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=41.05;MQRankSum=-0.524;QD=8.75;ReadPosRankSum=-1.036;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:72:72,0,241 chr2 203191046 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=42.29;MQRankSum=-0.842;QD=7.29;ReadPosRankSum=-0.431;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,2:6:72:72,0,241 chr2 203191055 . A G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=3.310;MLEAC=1;MLEAF=0.500;MQ=42.29;MQRankSum=-0.842;QD=7.29;ReadPosRankSum=-0.842;SOR=2.303 GT:AD:DP:GQ:PL 0/1:4,2:6:72:72,0,241 chr2 203197338 . A G 1113.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.511;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.77;ReadPosRankSum=1.606;SOR=0.715 GT:AD:DP:GQ:PL 0/1:66,48:114:99:1142,0,1758 chr2 203197606 . T C 188.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.60;ReadPosRankSum=-0.180;SOR=1.863 GT:AD:DP:GQ:PL 0/1:2,6:8:59:217,0,59 chr2 203226164 . C G 743.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.044;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=2.064;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.10;ReadPosRankSum=-0.815;SOR=1.071 GT:AD:DP:GQ:PL 0/1:38,29:67:99:772,0,1064 chr2 203246025 . G A 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=-0.349;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,213 chr2 203246671 . T C 2297.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.57;SOR=5.018 GT:AD:DP:GQ:PL 1/1:0,51:51:99:2326,157,0 chr2 203246720 . A G 1320.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.546;ClippingRankSum=0.000;DP=109;ExcessHet=3.0103;FS=2.736;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.12;ReadPosRankSum=0.286;SOR=1.066 GT:AD:DP:GQ:PL 0/1:61,48:109:99:1349,0,1561 chr2 203246982 . T C 1317.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.77;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1346,102,0 chr2 203249280 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 203251937 . A T 632.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.212;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=3.274;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.10;ReadPosRankSum=0.286;SOR=0.269 GT:AD:DP:GQ:PL 0/1:33,24:57:99:661,0,1059 chr2 203251967 . C T 874.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.759;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=2.132;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.41;ReadPosRankSum=-0.388;SOR=0.425 GT:AD:DP:GQ:PL 0/1:49,35:84:99:903,0,1427 chr2 203252164 . T G 462.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.659;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.869;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.44;ReadPosRankSum=-0.618;SOR=1.463 GT:AD:DP:GQ:PL 0/1:32,17:49:99:491,0,1041 chr2 203261740 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 203266313 . A G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 203289602 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 203289829 . C T 393.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.092;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.46;ReadPosRankSum=-0.802;SOR=0.668 GT:AD:DP:GQ:PL 0/1:40,21:61:99:422,0,977 chr2 203289963 . A G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 203292034 . G A 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.85;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 203292515 . A G 384.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.65;ReadPosRankSum=-1.351;SOR=1.911 GT:AD:DP:GQ:PL 0/1:4,11:15:99:413,0,122 chr2 203315270 . A C 365.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.498;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.32;ReadPosRankSum=-0.373;SOR=1.179 GT:AD:DP:GQ:PL 0/1:7,11:18:99:394,0,202 chr2 203328436 . C G 337.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.261;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=1.663;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.93;ReadPosRankSum=0.726;SOR=1.096 GT:AD:DP:GQ:PL 0/1:21,13:34:99:366,0,641 chr2 203342254 . C T 2765.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.39;SOR=1.223 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2794,231,0 chr2 203342255 . A C 929.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.980;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=4.625;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.23;ReadPosRankSum=-0.168;SOR=1.314 GT:AD:DP:GQ:PL 0/1:41,35:76:99:958,0,1007 chr2 203351836 . G A 355.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.91;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:384,30,0 chr2 203375014 . C T 1179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.459;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=2.865;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.82;ReadPosRankSum=-0.286;SOR=1.085 GT:AD:DP:GQ:PL 0/1:49,43:92:99:1208,0,1293 chr2 203375927 . C T 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=0.084;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,262 chr2 203395460 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.88;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,1:2:36:78,0,36 chr2 203395462 . C T 49.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:36:78,0,36 chr2 203397000 . G C 2975.77 PASS AC=2;AF=1.00;AN=2;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.36;SOR=1.014 GT:AD:DP:GQ:PL 1/1:0,98:98:99:3004,294,0 chr2 203397218 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 203402769 . G A 844.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.539;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=1.010;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.41;ReadPosRankSum=-0.553;SOR=0.536 GT:AD:DP:GQ:PL 0/1:29,34:63:99:873,0,820 chr2 203404763 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 203427147 . C T 621.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.766;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.570;SOR=0.437 GT:AD:DP:GQ:PL 0/1:28,21:49:99:650,0,941 chr2 203440370 . T C 1806.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.759;ClippingRankSum=0.000;DP=148;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.21;ReadPosRankSum=-1.706;SOR=0.707 GT:AD:DP:GQ:PL 0/1:76,72:148:99:1835,0,2045 chr2 203441522 . T C 802.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.042;ClippingRankSum=0.000;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.44;ReadPosRankSum=-0.236;SOR=1.022 GT:AD:DP:GQ:PL 0/1:28,24:52:99:831,0,1012 chr2 203441633 . A G 236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=26.31;ReadPosRankSum=0.967;SOR=2.093 GT:AD:DP:GQ:PL 0/1:2,7:9:52:265,0,52 chr2 203457575 . T C 3814.77 PASS AC=2;AF=1.00;AN=2;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.01;SOR=0.812 GT:AD:DP:GQ:PL 1/1:0,123:123:99:3843,369,0 chr2 203460050 . G A 184.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.135;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=0.856;SOR=0.569 GT:AD:DP:GQ:PL 0/1:8,7:15:99:213,0,255 chr2 203491099 . G A 855.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.99;SOR=6.184 GT:AD:DP:GQ:PL 1/1:0,21:21:63:884,63,0 chr2 203495478 . A G 403.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.132;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.56;ReadPosRankSum=0.181;SOR=0.776 GT:AD:DP:GQ:PL 0/1:11,12:23:99:432,0,377 chr2 203543267 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 203543278 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 203600953 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 203600967 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 203604808 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 203634882 . C T 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.142;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=2.246;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.24;ReadPosRankSum=0.609;SOR=0.199 GT:AD:DP:GQ:PL 0/1:9,7:16:99:176,0,282 chr2 203635866 . G T 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.200;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.94;MQRankSum=-2.200;QD=3.86;ReadPosRankSum=-1.383;SOR=0.495 GT:AD:DP:GQ:PL 0/1:7,2:9:63:63,0,390 chr2 203635872 . G A 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.200;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.94;MQRankSum=-2.200;QD=3.86;ReadPosRankSum=-1.383;SOR=0.495 GT:AD:DP:GQ:PL 0/1:7,2:9:63:63,0,390 chr2 203635883 . G T 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.94;MQRankSum=-2.200;QD=3.86;ReadPosRankSum=-1.383;SOR=0.495 GT:AD:DP:GQ:PL 0/1:7,2:9:63:63,0,396 chr2 203635884 . A G 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=54.94;MQRankSum=-2.200;QD=3.86;ReadPosRankSum=-1.383;SOR=0.495 GT:AD:DP:GQ:PL 0/1:7,2:9:63:63,0,396 chr2 203635887 . C T 34.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.319;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.93;MQRankSum=-1.534;QD=4.35;ReadPosRankSum=-0.489;SOR=1.535 GT:AD:DP:GQ:PL 0/1:7,1:8:63:63,0,396 chr2 203728090 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 203729789 . T C 1015.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.524;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.909;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.19;ReadPosRankSum=1.565;SOR=0.506 GT:AD:DP:GQ:PL 0/1:33,44:77:99:1044,0,870 chr2 203764698 . C T 258.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.060;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=1.740;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.32;ReadPosRankSum=0.518;SOR=0.991 GT:AD:DP:GQ:PL 0/1:11,10:21:99:287,0,228 chr2 203867991 . A G 2189.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.813;ClippingRankSum=0.000;DP=189;ExcessHet=3.0103;FS=1.779;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=0.318;SOR=0.571 GT:AD:DP:GQ:PL 0/1:100,89:189:99:2218,0,2459 chr2 203868127 . A G 1463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.461;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.80;ReadPosRankSum=-1.323;SOR=0.643 GT:AD:DP:GQ:PL 0/1:71,53:124:99:1492,0,1670 chr2 203871138 . G A 922.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.861;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=3.959;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.64;ReadPosRankSum=1.293;SOR=0.312 GT:AD:DP:GQ:PL 0/1:24,35:59:99:951,0,706 chr2 203956891 . C G 231.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.18;ReadPosRankSum=-0.374;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,7:10:95:260,0,95 chr2 203959560 . T G 3468.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.01;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3497,306,0 chr2 203959601 . A C 1705.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.141;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=3.024;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.18;ReadPosRankSum=-0.264;SOR=0.511 GT:AD:DP:GQ:PL 0/1:71,69:140:99:1734,0,1897 chr2 204394129 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 204457132 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 204457147 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 204505769 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 204536315 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 204586351 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 204635246 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 204965268 . C T 3742.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.55;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3771,345,0 chr2 205047487 . C A 342.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.879;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=4.314;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.71;ReadPosRankSum=0.196;SOR=1.802 GT:AD:DP:GQ:PL 0/1:20,12:32:99:371,0,569 chr2 205104496 . G A 3597.77 PASS AC=2;AF=1.00;AN=2;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.28;SOR=1.549 GT:AD:DP:GQ:PL 1/1:0,115:115:99:3626,345,0 chr2 205122043 . C T 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.34;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr2 205125629 . C T 1608.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.766;ClippingRankSum=0.000;DP=161;ExcessHet=3.0103;FS=1.279;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.99;ReadPosRankSum=0.087;SOR=0.844 GT:AD:DP:GQ:PL 0/1:98,63:161:99:1637,0,2426 chr2 205125953 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 205159169 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 205172194 . C T 2181.77 PASS AC=2;AF=1.00;AN=2;DP=69;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.62;SOR=1.211 GT:AD:DP:GQ:PL 1/1:0,69:69:99:2210,207,0 chr2 205176493 . C G 696.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.175;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.56;ReadPosRankSum=-0.145;SOR=0.693 GT:AD:DP:GQ:PL 0/1:33,33:66:99:725,0,874 chr2 205185631 . A G 528.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.075;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=8.858;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.52;ReadPosRankSum=2.577;SOR=0.041 GT:AD:DP:GQ:PL 0/1:12,20:32:99:557,0,403 chr2 205301856 . G A 1136.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.308;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=1.127;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.24;ReadPosRankSum=-0.715;SOR=1.029 GT:AD:DP:GQ:PL 0/1:33,37:70:99:1165,0,990 chr2 205440353 . T C 1088.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.358;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=5.059;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.10;ReadPosRankSum=0.661;SOR=0.208 GT:AD:DP:GQ:PL 0/1:52,38:90:99:1117,0,1758 chr2 205500013 . T C 2055.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.174;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=1.359;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.61;ReadPosRankSum=0.226;SOR=0.567 GT:AD:DP:GQ:PL 0/1:76,75:151:99:2084,0,2102 chr2 205553308 . G A 3095.77 PASS AC=2;AF=1.00;AN=2;DP=98;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.92;SOR=0.992 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3124,291,0 chr2 205615330 . C T 1156.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.63;SOR=3.407 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1185,90,0 chr2 205616849 . A G 514.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.37;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:543,39,0 chr2 205685413 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 205685554 . C A 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr2 205691484 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 205697526 . C T 4574.77 PASS AC=2;AF=1.00;AN=2;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.45;SOR=1.187 GT:AD:DP:GQ:PL 1/1:0,141:141:99:4603,422,0 chr2 205715990 . T G 1031.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.67;SOR=4.332 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1060,81,0 chr2 205727801 . A G 1261.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.72;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1290,96,0 chr2 205727971 . T C 6324.77 PASS AC=2;AF=1.00;AN=2;DP=210;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.41;SOR=0.857 GT:AD:DP:GQ:PL 1/1:0,208:208:99:6353,623,0 chr2 205740456 . T G 1798.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.900;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.92;ReadPosRankSum=0.680;SOR=0.632 GT:AD:DP:GQ:PL 0/1:48,65:113:99:1827,0,1327 chr2 205742976 . C T 210.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.355;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.04;ReadPosRankSum=1.745;SOR=0.346 GT:AD:DP:GQ:PL 0/1:13,8:21:99:239,0,468 chr2 205743315 . T C 5147.77 PASS AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.02;SOR=0.915 GT:AD:DP:GQ:PL 1/1:0,147:147:99:5176,442,0 chr2 205745150 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 205745501 . T C 66.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.68;ReadPosRankSum=-2.241;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,3:10:95:95,0,262 chr2 205749367 . T G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 205749426 . A G 308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.75;ReadPosRankSum=-0.111;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,9:13:99:337,0,128 chr2 205749436 . A G 627.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.33;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:656,45,0 chr2 205749922 . T G 2838.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.03;SOR=1.497 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2867,243,0 chr2 205750240 . G C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 205775916 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 205856420 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 205906029 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 205918636 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 205949198 . T C 265.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.610;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.66;ReadPosRankSum=0.927;SOR=0.818 GT:AD:DP:GQ:PL 0/1:10,11:21:99:294,0,286 chr2 205950105 . C T 56.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.676;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.34;ReadPosRankSum=0.862;SOR=0.551 GT:AD:DP:GQ:PL 0/1:11,6:17:85:85,0,305 chr2 205973028 . G A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.82;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 205973034 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.54;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 205973041 . T C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.64;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 205977486 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 206056727 . G A 7342.77 PASS AC=2;AF=1.00;AN=2;DP=219;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=1.270 GT:AD:DP:GQ:PL 1/1:0,219:219:99:7371,658,0 chr2 206057039 . C T 505.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.154;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.05;ReadPosRankSum=-0.926;SOR=0.582 GT:AD:DP:GQ:PL 0/1:19,17:36:99:534,0,617 chr2 206063126 . G A 611.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.214;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.75;ReadPosRankSum=-0.616;SOR=0.801 GT:AD:DP:GQ:PL 0/1:25,23:48:99:640,0,780 chr2 206067716 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 206124330 . A G 624.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.152;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.44;ReadPosRankSum=0.712;SOR=0.402 GT:AD:DP:GQ:PL 0/1:18,20:38:99:653,0,572 chr2 206124446 . C A 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.15;ReadPosRankSum=-0.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:68:104,0,68 chr2 206127633 . A G 130.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.68;ReadPosRankSum=-0.842;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:159,0,230 chr2 206127647 . G A 130.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.68;ReadPosRankSum=-0.566;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:159,0,230 chr2 206130415 . C A 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=-0.718;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,259 chr2 206142403 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 206144039 . C A 772.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.585;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=8.143;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=0.338;SOR=1.516 GT:AD:DP:GQ:PL 0/1:41,30:71:99:801,0,1163 chr2 206148867 . A G 303.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.70;ReadPosRankSum=-0.349;SOR=1.329 GT:AD:DP:GQ:PL 0/1:5,9:14:99:332,0,167 chr2 206149945 . A G 35.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.365;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.75;ReadPosRankSum=1.186;SOR=1.179 GT:AD:DP:GQ:PL 0/1:10,3:13:64:64,0,334 chr2 206158784 . T C 637.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.095;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.57;ReadPosRankSum=0.735;SOR=0.428 GT:AD:DP:GQ:PL 0/1:12,19:31:99:666,0,408 chr2 206158871 . C A 2047.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.573;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=0.799;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.62;ReadPosRankSum=0.849;SOR=0.826 GT:AD:DP:GQ:PL 0/1:56,54:110:99:2076,0,3227 chr2 206158896 . A G 2736.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.419;ClippingRankSum=0.000;DP=148;ExcessHet=3.0103;FS=1.374;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.49;ReadPosRankSum=-1.071;SOR=0.841 GT:AD:DP:GQ:PL 0/1:72,76:148:99:2765,0,3612 chr2 206160720 . T C 2248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.211;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=1.505;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.43;ReadPosRankSum=1.023;SOR=0.897 GT:AD:DP:GQ:PL 0/1:45,77:122:99:2277,0,1089 chr2 206176329 . T C 3854.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.678;ClippingRankSum=0.000;DP=280;ExcessHet=3.0103;FS=3.265;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.82;ReadPosRankSum=0.601;SOR=0.528 GT:AD:DP:GQ:PL 0/1:141,138:279:99:3883,0,3840 chr2 206217292 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 206233411 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 206236722 . G A 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 206236742 . C T 286.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.74;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:315,21,0 chr2 206236743 . A G 286.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.66;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:315,21,0 chr2 206305007 . G A 3794.77 PASS AC=2;AF=1.00;AN=2;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.258 GT:AD:DP:GQ:PL 1/1:0,117:117:99:3823,351,0 chr2 206307903 . A G 3224.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.03;SOR=1.154 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3253,276,0 chr2 206309592 . T C 3687.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.53;SOR=0.806 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3716,330,0 chr2 206310159 . C G 2281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.992;ClippingRankSum=0.000;DP=176;ExcessHet=3.0103;FS=2.636;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.96;ReadPosRankSum=0.080;SOR=0.918 GT:AD:DP:GQ:PL 0/1:94,82:176:99:2310,0,2610 chr2 206326497 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 206357100 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 206357625 . C G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=2.225 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 206377734 . T C 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr2 206410080 . G A 2543.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.085;ClippingRankSum=0.000;DP=214;ExcessHet=3.0103;FS=4.159;MLEAC=1;MLEAF=0.500;MQ=58.77;MQRankSum=1.585;QD=11.89;ReadPosRankSum=0.336;SOR=1.001 GT:AD:DP:GQ:PL 0/1:118,96:214:99:2572,0,3147 chr2 206410369 . C G 1158.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.529;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=1.145;MLEAC=1;MLEAF=0.500;MQ=59.92;MQRankSum=0.856;QD=15.25;ReadPosRankSum=-1.097;SOR=1.055 GT:AD:DP:GQ:PL 0/1:38,38:76:99:1187,0,1216 chr2 206410532 . A T 301.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=33.53;ReadPosRankSum=0.674;SOR=0.368 GT:AD:DP:GQ:PL 0/1:2,7:9:96:330,0,96 chr2 206444373 . C A 142.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.58;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:171,15,0 chr2 206481102 . G A 326.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.794;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.56;ReadPosRankSum=1.261;SOR=1.609 GT:AD:DP:GQ:PL 0/1:11,10:21:99:355,0,350 chr2 206481514 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 206549877 . G A 173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=1.781;SOR=0.340 GT:AD:DP:GQ:PL 0/1:10,6:16:99:202,0,369 chr2 206571043 . G A 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.07;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 206571445 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 206594743 . C T 772.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.881;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=5.298;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.71;ReadPosRankSum=0.797;SOR=0.280 GT:AD:DP:GQ:PL 0/1:38,28:66:99:801,0,1214 chr2 206595017 . C G 544.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.031;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.02;ReadPosRankSum=-0.399;SOR=0.693 GT:AD:DP:GQ:PL 0/1:17,17:34:99:573,0,573 chr2 206596435 . C A 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=0.431;SOR=0.105 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 206606160 . T C 374.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.025;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.92;ReadPosRankSum=0.144;SOR=0.784 GT:AD:DP:GQ:PL 0/1:14,15:29:99:403,0,366 chr2 206607849 . A G 129.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.037;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.63;ReadPosRankSum=0.741;SOR=0.693 GT:AD:DP:GQ:PL 0/1:12,5:17:99:158,0,416 chr2 206608030 . T C 739.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.158;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.21;ReadPosRankSum=-1.054;SOR=0.657 GT:AD:DP:GQ:PL 0/1:26,30:56:99:768,0,646 chr2 206614978 . C T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.674;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 206620673 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 206620682 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 206620692 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 206620696 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 206620698 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 206644017 . C T 253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.86;ReadPosRankSum=0.217;SOR=1.802 GT:AD:DP:GQ:PL 0/1:8,8:16:99:282,0,274 chr2 206694566 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 206718491 . C T 477.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.71;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,13:13:39:506,39,0 chr2 206749256 . G A 920.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.18;SOR=6.358 GT:AD:DP:GQ:PL 1/1:0,23:23:69:949,69,0 chr2 206765614 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 206771794 . C T 122.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.921;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.35;ReadPosRankSum=-0.489;SOR=0.105 GT:AD:DP:GQ:PL 0/1:3,5:8:99:151,0,101 chr2 206889690 . T C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 206955552 . G A 2124.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.557;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.49;ReadPosRankSum=0.183;SOR=0.689 GT:AD:DP:GQ:PL 0/1:101,84:185:99:2153,0,2796 chr2 206956415 . T G 190.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.25;ReadPosRankSum=0.210;SOR=0.707 GT:AD:DP:GQ:PL 0/1:1,6:7:67:228,0,67 chr2 206959660 . T G 899.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.044;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.33;ReadPosRankSum=-1.190;SOR=0.634 GT:AD:DP:GQ:PL 0/1:39,34:73:99:928,0,1091 chr2 206959824 . G A 990.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.605;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.76;ReadPosRankSum=0.459;SOR=0.645 GT:AD:DP:GQ:PL 0/1:35,37:72:99:1019,0,988 chr2 206959926 . A G 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=0.494;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:256,0,173 chr2 206960932 . A T 981.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.137;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=2.945;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.03;ReadPosRankSum=0.170;SOR=0.399 GT:AD:DP:GQ:PL 0/1:47,42:89:99:1010,0,1246 chr2 206969124 . A G 1623.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.775;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=9.407;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=-0.161;SOR=0.238 GT:AD:DP:GQ:PL 0/1:52,65:117:99:1652,0,1583 chr2 206969259 . A G 2970.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.106;ClippingRankSum=0.000;DP=281;ExcessHet=3.0103;FS=1.452;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.57;ReadPosRankSum=-0.458;SOR=0.793 GT:AD:DP:GQ:PL 0/1:163,118:281:99:2999,0,4477 chr2 207046697 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 207069077 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 207081417 . A G 1685.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.440;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=0.631;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.55;ReadPosRankSum=-0.152;SOR=0.593 GT:AD:DP:GQ:PL 0/1:78,68:146:99:1714,0,2001 chr2 207081440 . T C 1425.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.851;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.08;ReadPosRankSum=1.183;SOR=0.706 GT:AD:DP:GQ:PL 0/1:63,55:118:99:1454,0,1631 chr2 207088806 . C T 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=1.465;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,187 chr2 207106622 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 207110094 . C T 3258.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.50;SOR=2.226 GT:AD:DP:GQ:PL 1/1:0,91:91:99:3287,273,0 chr2 207110151 . A G 504.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.519;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=1.401;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.10;ReadPosRankSum=1.070;SOR=1.123 GT:AD:DP:GQ:PL 0/1:32,18:50:99:533,0,948 chr2 207123889 . C T 3389.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.78;SOR=0.714 GT:AD:DP:GQ:PL 1/1:0,93:93:99:3418,279,0 chr2 207124506 . G T 2893.77 PASS AC=2;AF=1.00;AN=2;DP=87;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.26;SOR=1.504 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2922,261,0 chr2 207134076 . C T 2363.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.38;SOR=0.836 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2392,219,0 chr2 207134297 . G C 922.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.14;SOR=0.811 GT:AD:DP:GQ:PL 1/1:0,34:34:99:951,101,0 chr2 207148831 . C A 187.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.31;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:216,18,0 chr2 207164290 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 207166443 . G A 112.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.422;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=1.799;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.51;ReadPosRankSum=0.562;SOR=1.193 GT:AD:DP:GQ:PL 0/1:19,6:25:99:141,0,502 chr2 207166539 . G C 278.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.030;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.34;SOR=1.230 GT:AD:DP:GQ:PL 0/1:3,8:11:99:307,0,125 chr2 207166591 . G T 117.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.465;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.82;ReadPosRankSum=-1.368;SOR=2.494 GT:AD:DP:GQ:PL 0/1:3,4:7:70:146,0,70 chr2 207167072 . C G 2101.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.908;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=4.373;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.01;ReadPosRankSum=0.909;SOR=1.088 GT:AD:DP:GQ:PL 0/1:102,73:175:99:2130,0,2941 chr2 207167268 . T A 7750.77 PASS AC=2;AF=1.00;AN=2;DP=243;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.90;SOR=1.301 GT:AD:DP:GQ:PL 1/1:0,243:243:99:7779,726,0 chr2 207225180 . T C 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr2 207310030 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 207318961 . C A 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,73 chr2 207346375 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 207346377 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 207561533 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 207571958 . G A 512.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.279;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.08;ReadPosRankSum=-0.898;SOR=0.678 GT:AD:DP:GQ:PL 0/1:15,19:34:99:541,0,420 chr2 207582918 . A T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 207608744 . G T 56.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=14.01;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:84,12,0 chr2 207613128 . G A 2265.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.04;SOR=1.257 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2294,219,0 chr2 207613232 . C T 3727.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.89;SOR=0.931 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3756,330,0 chr2 207621013 . T C 1528.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.69;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1557,129,0 chr2 207624377 . C A 5673.77 PASS AC=2;AF=1.00;AN=2;DP=171;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.38;SOR=1.311 GT:AD:DP:GQ:PL 1/1:0,170:170:99:5702,511,0 chr2 207648216 . A T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 207653593 . A G 163.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:192,15,0 chr2 207681581 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 207681666 . A C 237.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,8:8:24:266,24,0 chr2 207706259 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 207767369 . G A 5330.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.578;ClippingRankSum=0.000;DP=427;ExcessHet=3.0103;FS=0.519;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.51;ReadPosRankSum=1.385;SOR=0.737 GT:AD:DP:GQ:PL 0/1:224,202:426:99:5359,0,6482 chr2 207768689 . T C 4902.77 PASS AC=2;AF=1.00;AN=2;DP=142;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.53;SOR=1.373 GT:AD:DP:GQ:PL 1/1:0,142:142:99:4931,427,0 chr2 207768903 . C T 249.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.861;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.15;ReadPosRankSum=-0.177;SOR=1.179 GT:AD:DP:GQ:PL 0/1:10,9:19:99:278,0,292 chr2 207782127 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 207828537 . C G 1179.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.433;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.847;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.82;ReadPosRankSum=-0.131;SOR=0.870 GT:AD:DP:GQ:PL 0/1:48,44:92:99:1208,0,1307 chr2 207828583 . T C 821.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.278;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=4.592;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=-0.705;SOR=1.609 GT:AD:DP:GQ:PL 0/1:33,28:61:99:850,0,945 chr2 207832938 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 207832939 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 207852470 . G T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 207852716 . A G 1400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.238;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=2.413;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.29;ReadPosRankSum=-0.054;SOR=0.952 GT:AD:DP:GQ:PL 0/1:60,54:114:99:1429,0,1509 chr2 207929919 . T C 470.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.395;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.72;ReadPosRankSum=-0.050;SOR=0.754 GT:AD:DP:GQ:PL 0/1:31,23:54:99:499,0,914 chr2 207931354 . C T 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.674;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 207946373 . C T 881.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.703;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=0.796;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.56;ReadPosRankSum=0.074;SOR=0.868 GT:AD:DP:GQ:PL 0/1:64,39:103:99:910,0,1759 chr2 207946560 . C T 988.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.105;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.832;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.11;ReadPosRankSum=-0.340;SOR=0.593 GT:AD:DP:GQ:PL 0/1:49,40:89:99:1017,0,1302 chr2 207977240 . A G 3904.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.862;ClippingRankSum=0.000;DP=292;ExcessHet=3.0103;FS=4.586;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.42;ReadPosRankSum=-0.591;SOR=0.828 GT:AD:DP:GQ:PL 0/1:153,138:291:99:3933,0,4312 chr2 207977670 . A G 242.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.883;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.56;ReadPosRankSum=-0.145;SOR=0.346 GT:AD:DP:GQ:PL 0/1:13,8:21:99:271,0,468 chr2 208001669 . T C 363.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.747;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=1.882;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=-0.332;SOR=0.229 GT:AD:DP:GQ:PL 0/1:14,14:28:99:392,0,432 chr2 208005037 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 208045690 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.99;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 208046014 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 208073663 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 208089331 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 208091481 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 208108196 . A G 218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=0.289;SOR=0.582 GT:AD:DP:GQ:PL 0/1:8,7:15:99:247,0,285 chr2 208108220 . C T 521.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.389;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.63;ReadPosRankSum=-1.209;SOR=0.321 GT:AD:DP:GQ:PL 0/1:12,16:28:99:550,0,405 chr2 208108287 . A G 864.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.352;ClippingRankSum=0.000;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.73;ReadPosRankSum=0.986;SOR=0.793 GT:AD:DP:GQ:PL 0/1:29,34:63:99:893,0,716 chr2 208108350 . G A 935.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.462;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=1.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=-0.346;SOR=0.569 GT:AD:DP:GQ:PL 0/1:47,39:86:99:964,0,1261 chr2 208108528 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.034;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.52;ReadPosRankSum=1.204;SOR=0.368 GT:AD:DP:GQ:PL 0/1:12,3:15:81:81,0,390 chr2 208108599 . A G 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-0.431;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr2 208110195 . A G 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr2 208110213 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 208112231 . A C 367.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.903;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=3.681;MLEAC=1;MLEAF=0.500;MQ=58.55;MQRankSum=-3.011;QD=11.86;ReadPosRankSum=0.847;SOR=1.552 GT:AD:DP:GQ:PL 0/1:21,10:31:99:396,0,1042 chr2 208112245 . C A 361.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.990;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=5.867;MLEAC=1;MLEAF=0.500;MQ=57.36;MQRankSum=-2.150;QD=10.34;ReadPosRankSum=0.071;SOR=1.942 GT:AD:DP:GQ:PL 0/1:24,11:35:99:390,0,1126 chr2 208112248 . G C 358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.678;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=5.867;MLEAC=1;MLEAF=0.500;MQ=57.36;MQRankSum=-2.150;QD=10.25;ReadPosRankSum=-0.160;SOR=1.942 GT:AD:DP:GQ:PL 0/1:24,11:35:99:387,0,1164 chr2 208112251 . T C 358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.536;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=5.717;MLEAC=1;MLEAF=0.500;MQ=57.44;MQRankSum=-2.218;QD=9.97;ReadPosRankSum=-0.172;SOR=1.833 GT:AD:DP:GQ:PL 0/1:25,11:36:99:387,0,1164 chr2 208112337 . C A 429.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.341;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=1.325;MLEAC=1;MLEAF=0.500;MQ=52.65;MQRankSum=-4.846;QD=11.94;ReadPosRankSum=0.800;SOR=0.392 GT:AD:DP:GQ:PL 0/1:20,16:36:99:458,0,522 chr2 208112388 . C T 421.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.215;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=53.88;MQRankSum=-3.882;QD=13.18;ReadPosRankSum=1.034;SOR=0.656 GT:AD:DP:GQ:PL 0/1:15,17:32:99:450,0,394 chr2 208112599 . A G 669.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.264;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.25;ReadPosRankSum=-0.505;SOR=0.687 GT:AD:DP:GQ:PL 0/1:18,29:47:99:698,0,392 chr2 208121661 . A G 2446.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.630;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.37;ReadPosRankSum=1.033;SOR=0.736 GT:AD:DP:GQ:PL 0/1:96,87:183:99:2475,0,2693 chr2 208121913 . T C 3119.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.349;ClippingRankSum=0.000;DP=246;ExcessHet=3.0103;FS=7.469;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.68;ReadPosRankSum=-1.349;SOR=0.385 GT:AD:DP:GQ:PL 0/1:121,125:246:99:3148,0,3352 chr2 208122114 . C A 280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.52;ReadPosRankSum=0.533;SOR=1.802 GT:AD:DP:GQ:PL 0/1:3,8:11:99:309,0,151 chr2 208122115 . A G 280.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=28.08;ReadPosRankSum=0.798;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,7:10:99:309,0,151 chr2 208124313 . A G 1866.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=58.86;QD=28.84;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1895,159,0 chr2 208128047 . G A 242.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.863;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.28;ReadPosRankSum=-0.306;SOR=1.609 GT:AD:DP:GQ:PL 0/1:9,8:17:99:271,0,291 chr2 208129973 . C T 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-0.842;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,76 chr2 208130886 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 208132037 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 208140157 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 208140158 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 208142835 . T G 2739.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.081;ClippingRankSum=0.000;DP=207;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.24;ReadPosRankSum=-1.119;SOR=0.721 GT:AD:DP:GQ:PL 0/1:101,106:207:99:2768,0,2735 chr2 208145834 . A G 1672.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.127;ClippingRankSum=0.000;DP=147;ExcessHet=3.0103;FS=2.338;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.46;ReadPosRankSum=-0.079;SOR=0.501 GT:AD:DP:GQ:PL 0/1:77,69:146:99:1701,0,2137 chr2 208146403 . T C 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.385;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr2 208160502 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 208161199 . G T 198.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.526;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.94;ReadPosRankSum=-0.045;SOR=0.368 GT:AD:DP:GQ:PL 0/1:12,8:20:99:227,0,395 chr2 208163147 . A G 849.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.804;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.34;ReadPosRankSum=-0.273;SOR=0.746 GT:AD:DP:GQ:PL 0/1:57,34:91:99:878,0,1534 chr2 208163467 . C T 4262.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.975;ClippingRankSum=0.000;DP=363;ExcessHet=3.0103;FS=1.735;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.74;ReadPosRankSum=0.448;SOR=0.804 GT:AD:DP:GQ:PL 0/1:198,165:363:99:4291,0,5251 chr2 208165854 . A G 629.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.034;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.15;ReadPosRankSum=1.634;SOR=0.892 GT:AD:DP:GQ:PL 0/1:18,21:39:99:658,0,498 chr2 208168833 . C T 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr2 208168843 . G A 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:75:81,0,75 chr2 208170761 . T G 638.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.727;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=1.692;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.74;ReadPosRankSum=-0.560;SOR=1.143 GT:AD:DP:GQ:PL 0/1:15,21:36:99:667,0,416 chr2 208170934 . C T 5552.77 PASS AC=2;AF=1.00;AN=2;DP=176;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.55;SOR=0.972 GT:AD:DP:GQ:PL 1/1:0,176:176:99:5581,528,0 chr2 208171125 . A C 617.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.800;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.04;ReadPosRankSum=-0.888;SOR=0.957 GT:AD:DP:GQ:PL 0/1:22,22:44:99:646,0,604 chr2 208171212 . C T 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=4.260;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=-0.703;SOR=0.061 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,185 chr2 208171881 . T C 963.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.643;ClippingRankSum=0.000;DP=82;ExcessHet=3.0103;FS=7.643;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.75;ReadPosRankSum=-0.725;SOR=1.593 GT:AD:DP:GQ:PL 0/1:45,37:82:99:992,0,1122 chr2 208171988 . T C 1884.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.255;ClippingRankSum=0.000;DP=149;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=0.583;SOR=0.733 GT:AD:DP:GQ:PL 0/1:77,72:149:99:1913,0,2090 chr2 208172054 . A G 4753.77 PASS AC=2;AF=1.00;AN=2;DP=150;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.69;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,150:150:99:4782,450,0 chr2 208172164 . A G 1241.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.013;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=3.702;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.01;ReadPosRankSum=-0.098;SOR=1.287 GT:AD:DP:GQ:PL 0/1:30,43:73:99:1270,0,807 chr2 208172281 . T C 181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.253;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.36;ReadPosRankSum=0.380;SOR=0.473 GT:AD:DP:GQ:PL 0/1:9,7:16:99:210,0,294 chr2 208179385 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 208180933 . T C 1160.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.77;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,32:32:95:1189,95,0 chr2 208181115 . T C 1003.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.99;SOR=6.518 GT:AD:DP:GQ:PL 1/1:0,25:25:75:1032,75,0 chr2 208185116 . C T 1841.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.19;SOR=1.107 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1870,183,0 chr2 208189349 . A G 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr2 208200707 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 208200711 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 208245662 . T C 276.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.75;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:305,27,0 chr2 208255534 . G T 417.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.020;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=3.948;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.72;ReadPosRankSum=-0.195;SOR=1.508 GT:AD:DP:GQ:PL 0/1:28,15:43:99:446,0,878 chr2 208255916 . C T 1107.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.62;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,32:32:95:1136,95,0 chr2 208259019 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=2.303 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr2 208269301 . A G 421.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.53;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:450,30,0 chr2 208269311 . T C 463.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.88;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:492,33,0 chr2 208270009 . A T 156.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.38;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:185,15,0 chr2 208273397 . G A 259.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.83;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:288,21,0 chr2 208274222 . C T 958.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.24;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,28:28:84:987,84,0 chr2 208283914 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 208283915 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 208298832 . C T 2412.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.51;SOR=2.115 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2441,216,0 chr2 208300763 . A T 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.64;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr2 208302425 . T G 982.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.369;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=1.348;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.85;ReadPosRankSum=-1.040;SOR=0.412 GT:AD:DP:GQ:PL 0/1:30,32:62:99:1011,0,927 chr2 208304129 . C T 2205.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.42;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2234,198,0 chr2 208312083 . T G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 208315008 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 208317980 . A G 1123.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.337;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=2.683;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.83;ReadPosRankSum=0.055;SOR=0.947 GT:AD:DP:GQ:PL 0/1:49,46:95:99:1152,0,1375 chr2 208320120 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 208320256 . G A 502.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.42;SOR=1.244 GT:AD:DP:GQ:PL 1/1:0,16:16:48:531,48,0 chr2 208320275 . C T 511.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.10;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,17:17:51:540,51,0 chr2 208323936 . C T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=50.13;QD=31.62;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 208324718 . T C 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.69;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 208325188 . A G 2539.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.67;SOR=2.531 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2568,193,0 chr2 208325606 . T C 5094.77 PASS AC=2;AF=1.00;AN=2;DP=149;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.19;SOR=1.119 GT:AD:DP:GQ:PL 1/1:0,149:149:99:5123,447,0 chr2 208325795 . A T 9380.77 PASS AC=2;AF=1.00;AN=2;DP=213;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.97;SOR=1.001 GT:AD:DP:GQ:PL 1/1:0,213:213:99:9409,653,0 chr2 208325804 . C G 8949.77 PASS AC=2;AF=1.00;AN=2;DP=203;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.37;SOR=1.151 GT:AD:DP:GQ:PL 1/1:0,203:203:99:8978,614,0 chr2 208326358 . C A 5074.77 PASS AC=2;AF=1.00;AN=2;DP=143;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.88;SOR=1.781 GT:AD:DP:GQ:PL 1/1:0,143:143:99:5103,430,0 chr2 208326375 . T C 4419.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.02;SOR=1.807 GT:AD:DP:GQ:PL 1/1:0,125:125:99:4448,375,0 chr2 208328461 . C A 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.33;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 208329972 . G C 560.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.51;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:57:589,57,0 chr2 208330375 . G A 794.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.17;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:823,60,0 chr2 208330409 . T C 1241.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.38;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1270,96,0 chr2 208335221 . A G 853.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.40;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,24:24:72:882,72,0 chr2 208335670 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 208336330 . T C 480.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.14;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:509,39,0 chr2 208337015 . T C 847.77 PASS AC=2;AF=1.00;AN=2;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.91;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,25:25:75:876,75,0 chr2 208338398 . C G 1141.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.69;SOR=6.736 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1170,84,0 chr2 208342938 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 208342983 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 208343003 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 208345103 . G A 2842.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.30;SOR=1.691 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2871,263,0 chr2 208345273 . C T 1636.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1665,138,0 chr2 208347983 . G A 5632.77 PASS AC=2;AF=1.00;AN=2;DP=178;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.64;SOR=0.969 GT:AD:DP:GQ:PL 1/1:0,178:178:99:5661,533,0 chr2 208349850 . G A 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.61;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 208350046 . A G 1818.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.31;SOR=0.760 GT:AD:DP:GQ:PL 1/1:0,60:60:99:1847,180,0 chr2 208350724 . A G 2073.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.56;SOR=2.080 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2102,180,0 chr2 208350862 . A G 6322.77 PASS AC=2;AF=1.00;AN=2;DP=196;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.42;SOR=1.115 GT:AD:DP:GQ:PL 1/1:0,195:195:99:6351,585,0 chr2 208354325 . T A 189.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:218,18,0 chr2 208354466 . A G 836.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.15;SOR=4.712 GT:AD:DP:GQ:PL 1/1:0,21:21:63:865,63,0 chr2 208355433 . G T 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.00;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr2 208355514 . G C 137.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:165,12,0 chr2 208359917 . T A 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 208360498 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 208360583 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 208361265 . T C 293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.035;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=3.117;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.94;ReadPosRankSum=0.798;SOR=0.297 GT:AD:DP:GQ:PL 0/1:25,12:37:99:322,0,710 chr2 208369695 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 208377851 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=48.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 208428443 . C T 1488.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.84;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1517,126,0 chr2 208450848 . G A 2282.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.708;ClippingRankSum=0.000;DP=172;ExcessHet=3.0103;FS=1.185;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.27;ReadPosRankSum=0.316;SOR=0.596 GT:AD:DP:GQ:PL 0/1:79,93:172:99:2311,0,1813 chr2 208480941 . T G 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.524;SOR=1.609 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 208488833 . C T 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.097;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=-1.442;SOR=1.609 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,183 chr2 208488882 . A G 315.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.73;ReadPosRankSum=-0.279;SOR=1.352 GT:AD:DP:GQ:PL 0/1:13,10:23:99:344,0,474 chr2 208493302 . C T 2293.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.740;ClippingRankSum=0.000;DP=170;ExcessHet=3.0103;FS=2.654;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=-1.451;SOR=0.770 GT:AD:DP:GQ:PL 0/1:91,79:170:99:2322,0,2590 chr2 208603646 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 208686193 . T C 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr2 208842531 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 208860961 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 208860963 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 208870158 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 209097279 . A C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 209145139 . G A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 209145222 . A C 199.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.728;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.98;ReadPosRankSum=-1.054;SOR=0.569 GT:AD:DP:GQ:PL 0/1:3,7:10:95:228,0,95 chr2 209145341 . C T 700.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.505;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.95;ReadPosRankSum=-1.911;SOR=0.527 GT:AD:DP:GQ:PL 0/1:9,18:27:99:729,0,324 chr2 209145343 . T C 700.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.505;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=25.95;ReadPosRankSum=-1.833;SOR=0.527 GT:AD:DP:GQ:PL 0/1:9,18:27:99:729,0,324 chr2 209145412 . T C 985.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.86;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1014,90,0 chr2 209145504 . C G 302.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.434;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=58.29;MQRankSum=0.460;QD=7.76;ReadPosRankSum=-1.259;SOR=0.622 GT:AD:DP:GQ:PL 0/1:25,14:39:99:331,0,655 chr2 209179004 . T C 160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.86;ReadPosRankSum=0.105;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,6:9:98:189,0,98 chr2 209179760 . G T 1587.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.08;SOR=0.866 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1616,144,0 chr2 209179886 . C G 1094.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.10;SOR=1.255 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1123,87,0 chr2 209180610 . T C 225.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.799;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.81;ReadPosRankSum=-0.389;SOR=0.086 GT:AD:DP:GQ:PL 0/1:4,8:12:99:254,0,131 chr2 209181024 . C T 1121.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.16;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1150,108,0 chr2 209224939 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 209240848 . G C 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=-0.598;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,73 chr2 209240953 . A G 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 209241043 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 209247695 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 209247701 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.27;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr2 209653061 . C T 1281.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=4.743 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1310,99,0 chr2 209691052 . C T 281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.265;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.65;ReadPosRankSum=0.290;SOR=1.781 GT:AD:DP:GQ:PL 0/1:9,9:18:99:310,0,275 chr2 209729816 . A G 3197.77 PASS AC=2;AF=1.00;AN=2;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.97;SOR=1.839 GT:AD:DP:GQ:PL 1/1:0,97:97:99:3226,290,0 chr2 209730044 . T C 2420.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.97;SOR=0.724 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2449,189,0 chr2 209772982 . G A 897.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.175;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.63;ReadPosRankSum=-1.647;SOR=0.693 GT:AD:DP:GQ:PL 0/1:12,26:38:99:926,0,383 chr2 209775927 . C T 726.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.368;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=2.013;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.69;ReadPosRankSum=-0.931;SOR=0.426 GT:AD:DP:GQ:PL 0/1:45,30:75:99:755,0,1279 chr2 209777100 . G A 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.998;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=-1.915;SOR=1.371 GT:AD:DP:GQ:PL 0/1:7,5:12:99:173,0,222 chr2 209777749 . A T 408.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.933;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=6.486;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.72;ReadPosRankSum=0.054;SOR=0.052 GT:AD:DP:GQ:PL 0/1:12,14:26:99:437,0,420 chr2 209794710 . A G 321.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.18;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:350,30,0 chr2 209808990 . A G 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.680;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=-0.366;SOR=3.258 GT:AD:DP:GQ:PL 0/1:4,4:8:99:131,0,143 chr2 209809328 . C T 810.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.717;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.472;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.77;ReadPosRankSum=-0.929;SOR=0.379 GT:AD:DP:GQ:PL 0/1:16,25:41:99:839,0,471 chr2 209813967 . T G 480.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.45;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:509,39,0 chr2 209820858 . A G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:56:110,0,56 chr2 209826304 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 209839476 . C A 727.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.893;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=1.953;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.67;ReadPosRankSum=-0.765;SOR=0.349 GT:AD:DP:GQ:PL 0/1:13,24:37:99:756,0,398 chr2 209840624 . C G 1279.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.124;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=1.551;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.85;ReadPosRankSum=-0.620;SOR=0.659 GT:AD:DP:GQ:PL 0/1:58,50:108:99:1308,0,1587 chr2 209849438 . A G 718.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.222;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=2.561;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=-0.939;SOR=1.244 GT:AD:DP:GQ:PL 0/1:30,26:56:99:747,0,866 chr2 209872639 . T A 965.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.435;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.10;ReadPosRankSum=-0.043;SOR=0.347 GT:AD:DP:GQ:PL 0/1:30,30:60:99:994,0,1056 chr2 209873107 . A G 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=0.366;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:137,0,212 chr2 209880957 . C A 3043.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.20;SOR=1.636 GT:AD:DP:GQ:PL 1/1:0,89:89:99:3072,267,0 chr2 209881131 . C T 2132.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.015;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=1.413;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.28;ReadPosRankSum=-1.481;SOR=0.541 GT:AD:DP:GQ:PL 0/1:57,74:131:99:2161,0,1496 chr2 209912850 . T G 163.03 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.17;ReadPosRankSum=1.383;SOR=2.303 GT:AD:DP:GQ:PL 0/1:1,5:6:12:191,0,12 chr2 209921413 . G A 1122.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.02;SOR=3.193 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1151,99,0 chr2 209931277 . T C 138.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:166,12,0 chr2 209937242 . G A 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.15;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:69:74,0,69 chr2 209939715 . A T 281.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.893;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.81;ReadPosRankSum=-0.251;SOR=0.313 GT:AD:DP:GQ:PL 0/1:11,11:22:99:310,0,359 chr2 209943321 . C T 811.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.150;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=1.949;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.15;ReadPosRankSum=-0.079;SOR=0.937 GT:AD:DP:GQ:PL 0/1:46,34:80:99:840,0,1187 chr2 209943620 . T G 390.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.740;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.42;ReadPosRankSum=-0.738;SOR=0.892 GT:AD:DP:GQ:PL 0/1:4,12:16:99:419,0,119 chr2 209943680 . A G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 209945005 . T G 1369.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.014;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.898;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.22;ReadPosRankSum=0.042;SOR=0.824 GT:AD:DP:GQ:PL 0/1:41,49:90:99:1398,0,1114 chr2 209945744 . G A 273.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.132;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=-2.294;SOR=0.540 GT:AD:DP:GQ:PL 0/1:12,10:22:99:302,0,423 chr2 209945804 . A T 730.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.909;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.687;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.24;ReadPosRankSum=1.553;SOR=1.122 GT:AD:DP:GQ:PL 0/1:25,20:45:99:759,0,1280 chr2 209945805 . A G 730.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.311;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=1.663;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.55;ReadPosRankSum=1.714;SOR=1.316 GT:AD:DP:GQ:PL 0/1:27,20:47:99:759,0,1280 chr2 209945875 . A G 1061.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.371;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.42;ReadPosRankSum=-2.972;SOR=0.648 GT:AD:DP:GQ:PL 0/1:46,47:93:99:1090,0,1246 chr2 209945920 . G A 1060.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.861;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.05;ReadPosRankSum=1.150;SOR=0.670 GT:AD:DP:GQ:PL 0/1:52,44:96:99:1089,0,1441 chr2 209947678 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 209954247 . G A 1157.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.786;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=0.783;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.19;ReadPosRankSum=-1.638;SOR=0.557 GT:AD:DP:GQ:PL 0/1:46,49:95:99:1186,0,1152 chr2 209957396 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 209958881 . C T 176.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.06;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:205,15,0 chr2 209959048 . G T 1544.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.115;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.77;ReadPosRankSum=0.355;SOR=0.656 GT:AD:DP:GQ:PL 0/1:26,39:65:99:1573,0,1717 chr2 209969686 . A G 239.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.90;ReadPosRankSum=1.445;SOR=0.307 GT:AD:DP:GQ:PL 0/1:14,8:22:99:268,0,519 chr2 209973339 . T C 664.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.379;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.14;ReadPosRankSum=0.931;SOR=0.551 GT:AD:DP:GQ:PL 0/1:23,24:47:99:693,0,689 chr2 209975988 . G A 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.85;ReadPosRankSum=1.803;SOR=1.981 GT:AD:DP:GQ:PL 0/1:4,4:8:99:131,0,109 chr2 209976005 . G A 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.602;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=4.393;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=0.057;SOR=2.833 GT:AD:DP:GQ:PL 0/1:4,7:11:99:259,0,100 chr2 209977204 . T C 537.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.054;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.30;ReadPosRankSum=0.575;SOR=0.474 GT:AD:DP:GQ:PL 0/1:13,20:33:99:566,0,376 chr2 209978659 . G A 3599.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.871;ClippingRankSum=0.000;DP=286;ExcessHet=3.0103;FS=0.437;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.59;ReadPosRankSum=0.499;SOR=0.650 GT:AD:DP:GQ:PL 0/1:140,146:286:99:3628,0,3764 chr2 209981990 . A G 138.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:166,12,0 chr2 209984559 . T C 1224.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.04;SOR=6.869 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1253,90,0 chr2 209991934 . G A 1316.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.35;SOR=1.556 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1345,126,0 chr2 210008602 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 210009522 . T C 1297.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.511;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=4.773;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.64;ReadPosRankSum=-0.750;SOR=1.578 GT:AD:DP:GQ:PL 0/1:37,41:78:99:1326,0,1075 chr2 210016169 . C T 1196.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.35;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1225,111,0 chr2 210017732 . G T 160.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.717;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.46;ReadPosRankSum=0.293;SOR=1.061 GT:AD:DP:GQ:PL 0/1:7,10:17:89:189,0,89 chr2 210017953 . C T 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.62;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 210023316 . A C 180.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.076;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.63;ReadPosRankSum=0.484;SOR=0.425 GT:AD:DP:GQ:PL 0/1:10,7:17:99:209,0,367 chr2 210025035 . A G 931.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=3.180 GT:AD:DP:GQ:PL 1/1:0,27:27:81:960,81,0 chr2 210150558 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 210195326 . T G 845.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.558;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=4.027;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.44;ReadPosRankSum=0.058;SOR=0.302 GT:AD:DP:GQ:PL 0/1:37,31:68:99:874,0,1124 chr2 210204714 . G A 2942.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.34;SOR=1.688 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2971,273,0 chr2 210210185 . T C 696.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.007;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=2.070;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.72;ReadPosRankSum=0.656;SOR=0.459 GT:AD:DP:GQ:PL 0/1:34,31:65:99:725,0,882 chr2 210210478 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 210294131 . T C 612.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.591;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=2.191;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.13;ReadPosRankSum=0.390;SOR=1.791 GT:AD:DP:GQ:PL 0/1:19,19:38:99:641,0,617 chr2 210298274 . G A 920.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.15;SOR=6.358 GT:AD:DP:GQ:PL 1/1:0,23:23:69:949,69,0 chr2 210302408 . A T 2367.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.75;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2396,231,0 chr2 210302991 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 210303622 . A C 5951.77 PASS AC=2;AF=1.00;AN=2;DP=184;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.35;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,184:184:99:5980,552,0 chr2 210303914 . A G 711.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.68;SOR=5.892 GT:AD:DP:GQ:PL 1/1:0,18:18:54:740,54,0 chr2 210314836 . C T 383.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.156;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.604;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.99;ReadPosRankSum=1.728;SOR=0.368 GT:AD:DP:GQ:PL 0/1:15,17:32:99:412,0,462 chr2 210315011 . A G 426.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.078;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=0.972;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.69;ReadPosRankSum=-0.141;SOR=0.946 GT:AD:DP:GQ:PL 0/1:53,22:75:99:455,0,1573 chr2 210437903 . C A 1270.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.691;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=1.134;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.25;ReadPosRankSum=2.639;SOR=0.458 GT:AD:DP:GQ:PL 0/1:22,44:66:99:1299,0,584 chr2 210437961 . T C 194.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.886;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=2.517;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.90;ReadPosRankSum=0.253;SOR=1.238 GT:AD:DP:GQ:PL 0/1:25,8:33:99:223,0,843 chr2 210573672 . G A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 210590618 . T C 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr2 210591913 . A G 2394.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.19;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,54:54:99:2423,166,0 chr2 210591915 . C T 2394.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.60;SOR=0.767 GT:AD:DP:GQ:PL 1/1:0,54:54:99:2423,166,0 chr2 210600389 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 210605472 . T C 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr2 210616533 . C G 2599.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.21;SOR=0.911 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2628,267,0 chr2 210620749 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 210620752 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 210639474 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=40.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 210648394 . C T 1305.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.69;SOR=3.026 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1334,108,0 chr2 210650271 . G T 990.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.147;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=1.040;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.48;ReadPosRankSum=0.363;SOR=0.990 GT:AD:DP:GQ:PL 0/1:29,35:64:99:1019,0,803 chr2 210650334 . A T 729.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.765;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=4.530;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.24;ReadPosRankSum=1.724;SOR=0.975 GT:AD:DP:GQ:PL 0/1:50,29:79:99:758,0,1408 chr2 210658439 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 210658733 . C T 1974.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.446;ClippingRankSum=0.000;DP=158;ExcessHet=3.0103;FS=3.645;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.50;ReadPosRankSum=0.612;SOR=0.671 GT:AD:DP:GQ:PL 0/1:78,80:158:99:2003,0,1998 chr2 210668346 . A G 5597.77 PASS AC=2;AF=1.00;AN=2;DP=174;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.36;SOR=0.827 GT:AD:DP:GQ:PL 1/1:0,173:173:99:5626,519,0 chr2 210671545 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 211138425 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 211229426 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 211262172 . A G 362.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.98;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:33:391,33,0 chr2 211374350 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 211374351 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 211388084 . G A 1930.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.87;SOR=1.453 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1959,171,0 chr2 211420378 . T C 1152.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.90;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1181,102,0 chr2 211422209 . A T 1307.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.12;SOR=5.610 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1336,99,0 chr2 211431150 . C T 1807.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.65;SOR=2.970 GT:AD:DP:GQ:PL 1/1:0,51:51:99:1836,153,0 chr2 211624954 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 211679199 . A G 767.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.864;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.86;ReadPosRankSum=-0.393;SOR=0.765 GT:AD:DP:GQ:PL 0/1:17,26:43:99:796,0,513 chr2 211679299 . G A 204.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.389;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.62;ReadPosRankSum=-0.967;SOR=1.230 GT:AD:DP:GQ:PL 0/1:3,8:11:58:233,0,58 chr2 211704321 . A G 107.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.78;ReadPosRankSum=-1.068;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:136,0,218 chr2 211705154 . T C 62.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.97;ReadPosRankSum=-1.668;SOR=0.283 GT:AD:DP:GQ:PL 0/1:6,3:9:91:91,0,221 chr2 211705199 . G A 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.113;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=3.256;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.20;ReadPosRankSum=-1.705;SOR=2.303 GT:AD:DP:GQ:PL 0/1:8,6:14:99:185,0,224 chr2 211705258 . G A 328.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.101;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=3.617;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.74;ReadPosRankSum=0.376;SOR=1.549 GT:AD:DP:GQ:PL 0/1:15,13:28:99:357,0,372 chr2 211722596 . G A 646.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.014;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.76;ReadPosRankSum=0.756;SOR=0.551 GT:AD:DP:GQ:PL 0/1:25,22:47:99:675,0,783 chr2 211725261 . T C 6657.77 PASS AC=2;AF=1.00;AN=2;DP=207;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.16;SOR=1.598 GT:AD:DP:GQ:PL 1/1:0,207:207:99:6686,621,0 chr2 211750791 . T C 2586.77 PASS AC=2;AF=1.00;AN=2;DP=79;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.74;SOR=1.893 GT:AD:DP:GQ:PL 1/1:0,79:79:99:2615,237,0 chr2 211881625 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 211947335 . T C 127.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.30;ReadPosRankSum=-0.431;SOR=0.941 GT:AD:DP:GQ:PL 0/1:1,5:6:24:156,0,24 chr2 211947372 . T C 271.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.71;ReadPosRankSum=1.043;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,8:11:92:300,0,92 chr2 212113260 . C T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 212124583 . T C 589.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.47;SOR=5.670 GT:AD:DP:GQ:PL 1/1:0,16:16:48:618,48,0 chr2 212159270 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 212202506 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 212216269 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 212216271 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 212426475 . A G 311.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.64;SOR=2.093 GT:AD:DP:GQ:PL 1/1:0,9:9:27:340,27,0 chr2 212627427 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 212866446 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 213021730 . A T 935.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.106;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.863;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.00;ReadPosRankSum=-1.025;SOR=0.553 GT:AD:DP:GQ:PL 0/1:43,35:78:99:964,0,1084 chr2 213038385 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 213049619 . C T 1490.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.62;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1519,120,0 chr2 213083747 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 213147681 . A C 2843.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.021;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=1.497;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=24.73;ReadPosRankSum=0.954;SOR=0.409 GT:AD:DP:GQ:PL 1/1:8,107:115:91:2872,91,0 chr2 213147784 . C T 1413.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.929;ClippingRankSum=0.000;DP=141;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.03;ReadPosRankSum=0.896;SOR=0.664 GT:AD:DP:GQ:PL 0/1:83,58:141:99:1442,0,2415 chr2 213150448 . A G 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.702;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=2.963;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.72;ReadPosRankSum=-1.760;SOR=2.303 GT:AD:DP:GQ:PL 0/1:12,3:15:69:69,0,239 chr2 213150581 . A G 35.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=4.771;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.96;ReadPosRankSum=-0.084;SOR=0.039 GT:AD:DP:GQ:PL 0/1:4,2:6:64:64,0,110 chr2 213277907 . G C 65.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.613;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.44;ReadPosRankSum=1.712;SOR=0.821 GT:AD:DP:GQ:PL 0/1:22,5:27:94:94,0,632 chr2 213309935 . A G 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.11;ReadPosRankSum=0.566;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:134,0,104 chr2 213310201 . G A 530.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.922;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=4.072;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.69;ReadPosRankSum=0.428;SOR=1.781 GT:AD:DP:GQ:PL 0/1:12,18:30:99:559,0,309 chr2 213317376 . A T 404.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.680;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=1.692;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.24;ReadPosRankSum=-0.115;SOR=0.384 GT:AD:DP:GQ:PL 0/1:21,15:36:99:433,0,732 chr2 213322962 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 213364068 . C T 1800.77 PASS AC=2;AF=1.00;AN=2;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.35;SOR=1.567 GT:AD:DP:GQ:PL 1/1:0,54:54:99:1829,162,0 chr2 213364235 . G A 1723.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.44;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1752,138,0 chr2 213369049 . G A 143.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.340;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=1.885;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.19;ReadPosRankSum=0.919;SOR=0.269 GT:AD:DP:GQ:PL 0/1:12,8:20:99:172,0,305 chr2 213369088 . C A 590.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.69;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,23:23:69:619,69,0 chr2 213396294 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 213396532 . A G 1168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.782;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=0.755;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.13;ReadPosRankSum=0.578;SOR=0.850 GT:AD:DP:GQ:PL 0/1:59,46:105:99:1197,0,1441 chr2 213396810 . T C 158.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.68;ReadPosRankSum=1.068;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:187,0,62 chr2 213422340 . A G 1555.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.557;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=1.488;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.65;ReadPosRankSum=0.273;SOR=0.561 GT:AD:DP:GQ:PL 0/1:63,60:123:99:1584,0,1695 chr2 213490087 . G A 426.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.007;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.55;ReadPosRankSum=-0.813;SOR=0.784 GT:AD:DP:GQ:PL 0/1:15,19:34:99:455,0,389 chr2 213800294 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 213858900 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 213858906 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 213858947 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 213858971 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 213862426 . T C 455.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.029;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.88;ReadPosRankSum=0.910;SOR=0.743 GT:AD:DP:GQ:PL 0/1:11,16:27:99:484,0,310 chr2 213862497 . A C 1162.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.396;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=5.099;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.72;ReadPosRankSum=-0.532;SOR=0.299 GT:AD:DP:GQ:PL 0/1:36,43:79:99:1191,0,1080 chr2 213862643 . C G 1151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.627;ClippingRankSum=0.000;DP=99;ExcessHet=3.0103;FS=1.649;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.63;ReadPosRankSum=-1.157;SOR=0.890 GT:AD:DP:GQ:PL 0/1:53,46:99:99:1180,0,1639 chr2 213879586 . T A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 214149063 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.220;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=2.13;ReadPosRankSum=0.383;SOR=0.576 GT:AD:DP:GQ:PL 0/1:18,4:22:75:75,0,512 chr2 214204352 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 214238160 . T C 139.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.152;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=1.830;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.36;ReadPosRankSum=-1.064;SOR=1.179 GT:AD:DP:GQ:PL 0/1:12,7:19:99:168,0,261 chr2 214281041 . G A 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=-0.385;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,73 chr2 214332777 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 214465844 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 214478071 . C G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 214619482 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 214655359 . C T 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr2 214656942 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 214728509 . T C 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=-1.465;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr2 214729127 . G C 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 214729147 . T G 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.674;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 214730716 . T A 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 214730788 . C T 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.619;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.85;ReadPosRankSum=0.135;SOR=0.693 GT:AD:DP:GQ:PL 0/1:6,2:8:59:59,0,192 chr2 214730921 . C T 631.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.345;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.72;ReadPosRankSum=1.308;SOR=0.763 GT:AD:DP:GQ:PL 0/1:38,27:65:99:660,0,1116 chr2 214731041 . C G 2721.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.58;SOR=1.080 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2750,267,0 chr2 214731148 . G A 1349.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.08;SOR=3.545 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1378,96,0 chr2 214743768 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 214745589 . G T 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-1.501;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr2 214746016 . A T 423.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.83;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:452,33,0 chr2 214767431 . T C 291.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.059;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.482;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.51;ReadPosRankSum=0.303;SOR=0.324 GT:AD:DP:GQ:PL 0/1:39,14:53:99:320,0,1614 chr2 214767440 . A G 1219.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.423;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.03;ReadPosRankSum=0.573;SOR=0.871 GT:AD:DP:GQ:PL 0/1:17,41:58:99:1248,0,578 chr2 214767468 . G A 706.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.412;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=2.204;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.41;ReadPosRankSum=-1.058;SOR=1.049 GT:AD:DP:GQ:PL 0/1:56,28:84:99:735,0,1569 chr2 214767531 . C T 1866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.686;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=1.432;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.14;ReadPosRankSum=-0.187;SOR=0.882 GT:AD:DP:GQ:PL 0/1:81,51:132:99:1895,0,3274 chr2 214767532 . A G 1866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.869;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=1.423;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.04;ReadPosRankSum=-0.079;SOR=0.857 GT:AD:DP:GQ:PL 0/1:82,51:133:99:1895,0,3274 chr2 214769331 . C T 351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.973;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=3.969;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.56;ReadPosRankSum=-0.932;SOR=0.169 GT:AD:DP:GQ:PL 0/1:12,16:28:99:380,0,383 chr2 214780322 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 214780411 . A G 472.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.14;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,12:12:36:501,36,0 chr2 214780740 . C G 1595.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.361;ClippingRankSum=0.000;DP=139;ExcessHet=3.0103;FS=2.218;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.56;ReadPosRankSum=0.996;SOR=0.487 GT:AD:DP:GQ:PL 0/1:74,64:138:99:1624,0,2098 chr2 214788144 . A T 40.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:68,6,0 chr2 214788152 . G C 40.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:68,6,0 chr2 214796929 . T C 120.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.13;ReadPosRankSum=-0.842;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:65:149,0,65 chr2 214797187 . A C 1191.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.051;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=3.943;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.10;ReadPosRankSum=-0.314;SOR=0.702 GT:AD:DP:GQ:PL 0/1:43,48:91:99:1220,0,1063 chr2 214809213 . C T 438.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.60;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,12:12:36:467,36,0 chr2 214809366 . T G 5200.77 PASS AC=2;AF=1.00;AN=2;DP=162;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.10;SOR=1.509 GT:AD:DP:GQ:PL 1/1:0,162:162:99:5229,486,0 chr2 214809500 . G A 1679.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.020;ClippingRankSum=0.000;DP=127;ExcessHet=3.0103;FS=1.463;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.23;ReadPosRankSum=1.341;SOR=0.861 GT:AD:DP:GQ:PL 0/1:63,64:127:99:1708,0,1773 chr2 214809599 . C G 1886.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.30;SOR=2.200 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1915,132,0 chr2 214809617 . A G 1616.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.36;SOR=2.242 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1645,111,0 chr2 214809647 . C T 255.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.079;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=1.661;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.75;ReadPosRankSum=-0.098;SOR=1.347 GT:AD:DP:GQ:PL 0/1:23,10:33:99:284,0,708 chr2 214809712 . C T 378.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.14;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,13:13:39:407,39,0 chr2 214820640 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 214847275 . C T 252.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.032;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=3.401;MLEAC=1;MLEAF=0.500;MQ=58.23;MQRankSum=-2.594;QD=7.43;ReadPosRankSum=0.512;SOR=0.915 GT:AD:DP:GQ:PL 0/1:24,10:34:99:281,0,698 chr2 214847383 . T G 313.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.839;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.51;ReadPosRankSum=-0.927;SOR=0.760 GT:AD:DP:GQ:PL 0/1:7,12:19:99:342,0,201 chr2 214932608 . C T 1272.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.654;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.849;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.14;ReadPosRankSum=-0.523;SOR=0.826 GT:AD:DP:GQ:PL 0/1:43,47:90:99:1301,0,1117 chr2 214934000 . A C 126.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.921;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.05;ReadPosRankSum=-1.040;SOR=0.307 GT:AD:DP:GQ:PL 0/1:9,5:14:99:155,0,334 chr2 214937388 . G A 338.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.734;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=3.468;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.94;ReadPosRankSum=0.535;SOR=2.093 GT:AD:DP:GQ:PL 0/1:9,11:20:99:367,0,282 chr2 214947573 . G A 1596.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.078;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.688;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.01;ReadPosRankSum=0.806;SOR=0.790 GT:AD:DP:GQ:PL 0/1:72,61:133:99:1625,0,1999 chr2 214949176 . T A 1249.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.477;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=1.610;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.90;ReadPosRankSum=2.405;SOR=0.913 GT:AD:DP:GQ:PL 0/1:53,52:105:99:1278,0,1255 chr2 214950684 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 214955129 . T C 514.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.343;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.51;ReadPosRankSum=-1.071;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,18:21:63:543,0,63 chr2 214958622 . A G 138.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:166,12,0 chr2 214958667 . G A 39.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=-1.036;SOR=0.446 GT:AD:DP:GQ:PL 0/1:3,2:5:68:68,0,110 chr2 214959258 . T C 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=0.566;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr2 214967019 . T C 612.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=1.358;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.56;ReadPosRankSum=-0.439;SOR=0.422 GT:AD:DP:GQ:PL 0/1:33,25:58:99:641,0,1020 chr2 214968691 . A G 2040.77 PASS AC=2;AF=1.00;AN=2;DP=65;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.89;SOR=1.721 GT:AD:DP:GQ:PL 1/1:0,64:64:99:2069,192,0 chr2 214968898 . G T 1470.77 PASS AC=2;AF=1.00;AN=2;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.22;SOR=3.003 GT:AD:DP:GQ:PL 1/1:0,41:41:99:1499,123,0 chr2 214973637 . T G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 214975024 . G A 210.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.66;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:239,18,0 chr2 214975690 . C A 1090.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.74;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1119,90,0 chr2 214976105 . A G 480.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.79;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:509,39,0 chr2 214979225 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 214979230 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 214979305 . G C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 214982453 . C A 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=-1.068;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr2 214983310 . T C 1408.77 PASS AC=2;AF=1.00;AN=2;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.88;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,38:38:99:1437,114,0 chr2 214986522 . A G 1029.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.69;SOR=4.332 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1058,81,0 chr2 214986579 . A G 576.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.086;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=3.968;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.61;ReadPosRankSum=0.195;SOR=0.278 GT:AD:DP:GQ:PL 0/1:42,25:67:99:605,0,1132 chr2 214991056 . G A 419.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.134;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.725;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.35;ReadPosRankSum=-0.304;SOR=1.292 GT:AD:DP:GQ:PL 0/1:20,14:34:99:448,0,563 chr2 214991173 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 214997659 . G A 153.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.057;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=2.682;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.69;ReadPosRankSum=-0.602;SOR=1.981 GT:AD:DP:GQ:PL 0/1:17,6:23:99:182,0,490 chr2 214997909 . C G 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.29;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr2 215001125 . G A 513.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.09;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:542,39,0 chr2 215004342 . T C 141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.383;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.18;ReadPosRankSum=-0.497;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,6:10:99:170,0,133 chr2 215007610 . G A 1204.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.566;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=10.438;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.46;ReadPosRankSum=0.255;SOR=0.453 GT:AD:DP:GQ:PL 0/1:28,41:69:99:1233,0,894 chr2 215009141 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 215009290 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 215010194 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 215010241 . G T 218.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.58;ReadPosRankSum=-1.318;SOR=0.582 GT:AD:DP:GQ:PL 0/1:8,7:15:99:247,0,289 chr2 215010527 . A T 1933.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.53;SOR=2.564 GT:AD:DP:GQ:PL 1/1:0,56:56:99:1962,168,0 chr2 215011442 . A T 1916.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.81;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1945,156,0 chr2 215013115 . G T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 215013186 . C G 298.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.20;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:327,27,0 chr2 215013516 . G A 3099.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.96;SOR=0.874 GT:AD:DP:GQ:PL 1/1:0,70:70:99:3128,214,0 chr2 215013522 . C T 2962.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.05;SOR=0.849 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2991,202,0 chr2 215015344 . G A 101.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.18;ReadPosRankSum=-1.399;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:130,0,221 chr2 215015384 . C T 1212.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.87;SOR=6.869 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1241,90,0 chr2 215017804 . A G 240.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.050;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.52;ReadPosRankSum=-0.058;SOR=0.593 GT:AD:DP:GQ:PL 0/1:4,9:13:99:269,0,118 chr2 215017805 . G A 509.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.63;SOR=3.767 GT:AD:DP:GQ:PL 1/1:0,13:13:39:538,39,0 chr2 215025529 . C G 172.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.81;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:201,18,0 chr2 215025588 . A G 434.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.34;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:33:463,33,0 chr2 215031592 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 215031625 . T G 234.84 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.85;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:18:263,18,0 chr2 215031628 . A G 234.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.03;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:263,18,0 chr2 215050010 . C A 138.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:166,12,0 chr2 215075191 . G C 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=-0.253;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr2 215075217 . A C 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr2 215075519 . T C 3336.77 PASS AC=2;AF=1.00;AN=2;DP=103;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.40;SOR=1.125 GT:AD:DP:GQ:PL 1/1:0,103:103:99:3365,308,0 chr2 215111508 . A T 312.73 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,11:11:33:350,33,0 chr2 215182151 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 215204728 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 215204766 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 215215287 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 215215378 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 215215405 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 215230270 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 215237752 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 215239989 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 215240032 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.60;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 215240033 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.97;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 215240076 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 215240128 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 215245097 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 215246108 . G A 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.645;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.842;SOR=2.833 GT:AD:DP:GQ:PL 0/1:2,3:5:34:110,0,34 chr2 215283154 . G A 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 215292438 . A T 59.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:87,9,0 chr2 215311925 . A G 446.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.37;SOR=2.147 GT:AD:DP:GQ:PL 1/1:0,13:13:39:475,39,0 chr2 215312084 . T G 536.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.375;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.17;ReadPosRankSum=-0.720;SOR=0.914 GT:AD:DP:GQ:PL 0/1:10,18:28:99:565,0,265 chr2 215315370 . A T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 215315377 . T G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 215315500 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 215318046 . A T 1457.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.19;SOR=5.728 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1486,105,0 chr2 215318047 . C T 586.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.612;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=3.136;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.76;ReadPosRankSum=-1.083;SOR=1.791 GT:AD:DP:GQ:PL 0/1:17,18:35:99:615,0,571 chr2 215319759 . A G 859.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.550;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=0.799;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.66;ReadPosRankSum=-0.034;SOR=0.788 GT:AD:DP:GQ:PL 0/1:54,35:89:99:888,0,1567 chr2 215325102 . A G 463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=28.99;ReadPosRankSum=0.356;SOR=2.049 GT:AD:DP:GQ:PL 0/1:4,12:16:99:492,0,274 chr2 215325122 . A G 573.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.687;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.32;ReadPosRankSum=0.938;SOR=1.828 GT:AD:DP:GQ:PL 0/1:6,15:21:99:602,0,342 chr2 215325297 . C G 905.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.745;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=1.558;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.95;ReadPosRankSum=0.396;SOR=0.510 GT:AD:DP:GQ:PL 0/1:71,43:114:99:934,0,1833 chr2 215325968 . A C 3919.77 PASS AC=2;AF=1.00;AN=2;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.69;SOR=2.938 GT:AD:DP:GQ:PL 1/1:0,113:113:99:3948,338,0 chr2 215326810 . C T 761.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.731;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.000;SOR=0.606 GT:AD:DP:GQ:PL 0/1:30,28:58:99:790,0,908 chr2 215328638 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 215330907 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 215333248 . T C 1369.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.10;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1398,96,0 chr2 215333256 . G A 631.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.189;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.14;ReadPosRankSum=0.582;SOR=0.337 GT:AD:DP:GQ:PL 0/1:14,19:33:99:660,0,485 chr2 215334802 . T C 178.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.331;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.52;ReadPosRankSum=-0.808;SOR=0.399 GT:AD:DP:GQ:PL 0/1:10,7:17:99:207,0,333 chr2 215334828 . T A 469.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.774;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.68;ReadPosRankSum=-1.288;SOR=1.112 GT:AD:DP:GQ:PL 0/1:16,16:32:99:498,0,469 chr2 215335158 . T G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.35;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 215336184 . C G 1061.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.25;SOR=2.376 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1090,93,0 chr2 215344749 . A G 1219.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.349;ClippingRankSum=0.000;DP=91;ExcessHet=3.0103;FS=2.198;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.71;ReadPosRankSum=-0.944;SOR=0.992 GT:AD:DP:GQ:PL 0/1:47,42:89:99:1248,0,1399 chr2 215345228 . A G 78.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.13;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:107,0,107 chr2 215346989 . A T 4094.77 PASS AC=2;AF=1.00;AN=2;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=1.685 GT:AD:DP:GQ:PL 1/1:0,128:128:99:4123,384,0 chr2 215347366 . C T 324.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.807;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=3.388;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.53;ReadPosRankSum=0.259;SOR=0.144 GT:AD:DP:GQ:PL 0/1:13,11:24:99:353,0,451 chr2 215347556 . G C 644.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.310;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=1.931;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.37;ReadPosRankSum=1.091;SOR=0.968 GT:AD:DP:GQ:PL 0/1:48,29:77:99:673,0,1287 chr2 215347616 . T C 490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.023;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=6.301;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.92;ReadPosRankSum=1.051;SOR=1.678 GT:AD:DP:GQ:PL 0/1:37,18:55:99:519,0,1046 chr2 215349401 . G A 340.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.090;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.11;ReadPosRankSum=-0.211;SOR=0.566 GT:AD:DP:GQ:PL 0/1:15,11:26:99:369,0,548 chr2 215361919 . A C 2226.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.912;ClippingRankSum=0.000;DP=150;ExcessHet=3.0103;FS=1.432;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.85;ReadPosRankSum=-1.683;SOR=0.847 GT:AD:DP:GQ:PL 0/1:66,84:150:99:2255,0,1805 chr2 215364969 . A G 1029.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.831;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.850;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.87;ReadPosRankSum=-0.866;SOR=0.883 GT:AD:DP:GQ:PL 0/1:38,42:80:99:1058,0,994 chr2 215365493 . G C 750.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.600;ClippingRankSum=0.000;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.73;ReadPosRankSum=1.080;SOR=0.727 GT:AD:DP:GQ:PL 0/1:35,29:64:99:779,0,1094 chr2 215365812 . T A 288.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.261;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.99;ReadPosRankSum=2.225;SOR=1.061 GT:AD:DP:GQ:PL 0/1:7,10:17:99:317,0,170 chr2 215367576 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 215370366 . C T 7608.77 PASS AC=2;AF=1.00;AN=2;DP=243;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.93;QD=31.31;SOR=0.823 GT:AD:DP:GQ:PL 1/1:0,243:243:99:7637,726,0 chr2 215370665 . A G 236.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=3.539;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=9.132;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.29;ReadPosRankSum=0.440;SOR=3.223 GT:AD:DP:GQ:PL 0/1:15,8:23:99:265,0,356 chr2 215379109 . T C 3320.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.68;SOR=2.486 GT:AD:DP:GQ:PL 1/1:0,93:93:99:3349,279,0 chr2 215381357 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 215383582 . G T 1956.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.99;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1985,156,0 chr2 215384394 . C T 36.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.13;ReadPosRankSum=-0.084;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,2:6:65:65,0,149 chr2 215384864 . C T 2273.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.44;SOR=1.542 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2302,203,0 chr2 215385025 . T C 555.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.740;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=2.509;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.84;ReadPosRankSum=-0.391;SOR=1.759 GT:AD:DP:GQ:PL 0/1:14,19:33:99:584,0,385 chr2 215385096 . C T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.73;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 215388316 . G C 3068.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.10;SOR=1.295 GT:AD:DP:GQ:PL 1/1:0,90:90:99:3097,270,0 chr2 215388731 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 215391498 . T G 601.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.50;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:630,42,0 chr2 215391504 . G C 643.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.70;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:672,45,0 chr2 215397898 . A C 1507.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.224;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=2.209;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.77;ReadPosRankSum=-1.898;SOR=0.953 GT:AD:DP:GQ:PL 0/1:80,60:140:99:1536,0,2161 chr2 215398065 . A G 588.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.414;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=1.075;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.90;ReadPosRankSum=0.320;SOR=0.467 GT:AD:DP:GQ:PL 0/1:28,26:54:99:617,0,769 chr2 215399203 . C A 1133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.249;ClippingRankSum=0.000;DP=67;ExcessHet=3.0103;FS=6.007;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.92;ReadPosRankSum=-0.583;SOR=0.240 GT:AD:DP:GQ:PL 0/1:27,40:67:99:1162,0,784 chr2 215404308 . G T 1248.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.201;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.01;ReadPosRankSum=-0.461;SOR=0.609 GT:AD:DP:GQ:PL 0/1:20,32:52:99:1277,0,743 chr2 215404310 . T G 1154.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.199;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=1.652;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.21;ReadPosRankSum=-0.033;SOR=0.424 GT:AD:DP:GQ:PL 0/1:20,32:52:99:1192,0,744 chr2 215404323 . G T 712.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.526;ClippingRankSum=0.000;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.68;ReadPosRankSum=1.298;SOR=0.487 GT:AD:DP:GQ:PL 0/1:40,21:61:99:741,0,1553 chr2 215404372 . C T 1546.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.059;ClippingRankSum=0.000;DP=142;ExcessHet=3.0103;FS=2.750;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.05;ReadPosRankSum=-1.841;SOR=0.430 GT:AD:DP:GQ:PL 0/1:83,57:140:99:1575,0,2595 chr2 215404486 . T G 3563.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.501;ClippingRankSum=0.000;DP=299;ExcessHet=3.0103;FS=6.170;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.92;ReadPosRankSum=-0.690;SOR=1.018 GT:AD:DP:GQ:PL 0/1:164,135:299:99:3592,0,4480 chr2 215404531 . T G 3972.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.025;ClippingRankSum=0.000;DP=314;ExcessHet=3.0103;FS=11.611;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.73;ReadPosRankSum=0.946;SOR=0.714 GT:AD:DP:GQ:PL 0/1:169,143:312:99:4001,0,4729 chr2 215407040 . A T 508.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=31.80;ReadPosRankSum=0.351;SOR=3.258 GT:AD:DP:GQ:PL 0/1:2,14:16:35:537,0,35 chr2 215407089 . A T 795.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.948;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.40;ReadPosRankSum=-1.108;SOR=0.651 GT:AD:DP:GQ:PL 0/1:11,23:34:99:824,0,357 chr2 215408096 . C G 601.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.036;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=15.281;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.75;ReadPosRankSum=1.139;SOR=0.046 GT:AD:DP:GQ:PL 0/1:32,24:56:99:630,0,1099 chr2 215408177 . T G 5312.77 PASS AC=2;AF=1.00;AN=2;DP=137;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.11;SOR=1.162 GT:AD:DP:GQ:PL 1/1:0,137:137:99:5341,418,0 chr2 215408184 . A T 1703.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.717;ClippingRankSum=0.000;DP=144;ExcessHet=3.0103;FS=1.324;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.83;ReadPosRankSum=-2.003;SOR=0.822 GT:AD:DP:GQ:PL 0/1:73,71:144:99:1732,0,2010 chr2 215419235 . T A 1612.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.807;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.90;ReadPosRankSum=-0.375;SOR=0.699 GT:AD:DP:GQ:PL 0/1:83,65:148:99:1641,0,1986 chr2 215422370 . A G 560.22 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=3.139;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=9.542;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=31.12;ReadPosRankSum=2.058;SOR=5.670 GT:AD:DP:GQ:PL 1/1:2,16:18:4:587,4,0 chr2 215424118 . T C 1377.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.112;ClippingRankSum=0.000;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.12;ReadPosRankSum=-0.715;SOR=0.744 GT:AD:DP:GQ:PL 0/1:56,49:105:99:1406,0,1647 chr2 215425424 . T A 389.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.256;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.26;ReadPosRankSum=-0.092;SOR=0.764 GT:AD:DP:GQ:PL 0/1:22,16:38:99:418,0,634 chr2 215430589 . T A 389.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.50;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,10:10:30:418,30,0 chr2 215433073 . G C 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr2 215434558 . A C 260.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.728;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.38;ReadPosRankSum=0.320;SOR=0.818 GT:AD:DP:GQ:PL 0/1:7,8:15:99:289,0,215 chr2 215434827 . G A 1000.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.538;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=1.271;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.29;ReadPosRankSum=0.075;SOR=0.442 GT:AD:DP:GQ:PL 0/1:21,26:47:99:1029,0,793 chr2 215434828 . C A 1000.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.357;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=1.271;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.29;ReadPosRankSum=0.107;SOR=0.442 GT:AD:DP:GQ:PL 0/1:21,26:47:99:1029,0,793 chr2 215434906 . C G 585.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.94;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:614,45,0 chr2 215435462 . C T 1182.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.31;SOR=5.353 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1211,87,0 chr2 215435759 . T A 2808.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.04;SOR=1.781 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2837,255,0 chr2 215439287 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 215439312 . G A 40.10 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.02;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:11:68,11,0 chr2 215450401 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 215657095 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 215657104 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 215664134 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 215668235 . C A 42.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 215746984 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 215988296 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 215988390 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 216001472 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 216010389 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.51;MQRankSum=-0.674;QD=11.69;ReadPosRankSum=0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:75:75,0,110 chr2 216010403 . G A 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=59.61;MQRankSum=-0.842;QD=9.35;ReadPosRankSum=0.524;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,110 chr2 216010512 . T C 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 216013285 . C G 1400.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.913;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=1.689;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.90;ReadPosRankSum=-1.339;SOR=0.948 GT:AD:DP:GQ:PL 0/1:45,49:94:99:1429,0,1324 chr2 216028117 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 216043956 . C T 547.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.837;ClippingRankSum=0.000;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.06;ReadPosRankSum=0.058;SOR=0.655 GT:AD:DP:GQ:PL 0/1:42,26:68:99:576,0,1126 chr2 216044187 . T C 464.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.028;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=2.829;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.81;ReadPosRankSum=-0.331;SOR=0.301 GT:AD:DP:GQ:PL 0/1:24,19:43:99:493,0,657 chr2 216079747 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 216079756 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 216086998 . C T 62.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:90,9,0 chr2 216096472 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.41;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 216106078 . C T 466.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.17;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:33:495,33,0 chr2 216106080 . G C 466.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.12;SOR=1.802 GT:AD:DP:GQ:PL 1/1:0,11:11:33:495,33,0 chr2 216127370 . T C 734.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.367;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.61;ReadPosRankSum=-1.052;SOR=0.693 GT:AD:DP:GQ:PL 0/1:27,27:54:99:763,0,796 chr2 216138429 . T C 426.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.03;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:455,33,0 chr2 216148178 . A G 2112.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.50;SOR=0.854 GT:AD:DP:GQ:PL 1/1:0,65:65:99:2141,195,0 chr2 216160951 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 216190448 . A G 2406.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.79;SOR=2.799 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2435,201,0 chr2 216194705 . G A 931.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.30;SOR=4.892 GT:AD:DP:GQ:PL 1/1:0,23:23:69:960,69,0 chr2 216204428 . A G 2923.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.85;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2952,267,0 chr2 216216803 . C G 1151.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.583;ClippingRankSum=0.000;DP=94;ExcessHet=3.0103;FS=2.727;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.25;ReadPosRankSum=-1.013;SOR=1.022 GT:AD:DP:GQ:PL 0/1:50,44:94:99:1180,0,1325 chr2 216259235 . T C 1213.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.733;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=2.614;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.62;ReadPosRankSum=1.721;SOR=0.390 GT:AD:DP:GQ:PL 0/1:42,41:83:99:1242,0,1324 chr2 216283694 . C A 4963.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.079;ClippingRankSum=0.000;DP=373;ExcessHet=3.0103;FS=3.472;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.31;ReadPosRankSum=-0.917;SOR=0.528 GT:AD:DP:GQ:PL 0/1:178,195:373:99:4992,0,4771 chr2 216283823 . A G 1021.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.297;ClippingRankSum=0.000;DP=59;ExcessHet=3.0103;FS=3.074;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.32;ReadPosRankSum=1.263;SOR=0.112 GT:AD:DP:GQ:PL 0/1:28,31:59:99:1050,0,932 chr2 216287292 . T C 119.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=19.97;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:148,18,0 chr2 216288833 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 216322602 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 216322609 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 216347003 . T G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 216350545 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 216377511 . G A 53.89 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.150;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 1/1:1,3:4:2:80,2,0 chr2 216412846 . T G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 216415045 . G A 2496.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.704;ClippingRankSum=0.000;DP=166;ExcessHet=3.0103;FS=0.572;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.04;ReadPosRankSum=0.113;SOR=0.694 GT:AD:DP:GQ:PL 0/1:80,86:166:99:2525,0,2249 chr2 216416153 . T C 1656.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.549;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=1.772;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.16;ReadPosRankSum=0.133;SOR=0.922 GT:AD:DP:GQ:PL 0/1:60,57:117:99:1685,0,1746 chr2 216420396 . C T 1224.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.133;ClippingRankSum=0.000;DP=86;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.24;ReadPosRankSum=-0.415;SOR=0.791 GT:AD:DP:GQ:PL 0/1:43,43:86:99:1253,0,1302 chr2 216446358 . G C 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=-1.117;SOR=0.120 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,218 chr2 216446886 . G A 1396.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.77;SOR=2.649 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1425,105,0 chr2 216450941 . C T 2966.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.441;ClippingRankSum=0.000;DP=218;ExcessHet=3.0103;FS=5.890;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.67;ReadPosRankSum=0.563;SOR=0.403 GT:AD:DP:GQ:PL 0/1:107,110:217:99:2995,0,3032 chr2 216485113 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 216499816 . C T 2239.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.68;SOR=0.776 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2268,218,0 chr2 216554877 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 216559894 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 216583607 . C A 146.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.97;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,7:7:21:175,21,0 chr2 216592464 . A G 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 216610476 . G A 962.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.042;ClippingRankSum=0.000;DP=83;ExcessHet=3.0103;FS=1.832;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.60;ReadPosRankSum=-1.086;SOR=0.990 GT:AD:DP:GQ:PL 0/1:43,40:83:99:991,0,1104 chr2 216634116 . T G 124.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.489;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=3.332;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.60;ReadPosRankSum=0.703;SOR=1.901 GT:AD:DP:GQ:PL 0/1:3,5:8:99:153,0,100 chr2 216676859 . T C 5151.77 PASS AC=2;AF=1.00;AN=2;DP=166;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.03;SOR=0.742 GT:AD:DP:GQ:PL 1/1:0,166:166:99:5180,498,0 chr2 216679512 . C T 79.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.95;ReadPosRankSum=-0.842;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:108,0,68 chr2 216719144 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 216769471 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 216769476 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 216777755 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 216810266 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 216826269 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 216871408 . G A 648.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.636;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.619;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.54;ReadPosRankSum=1.546;SOR=0.446 GT:AD:DP:GQ:PL 0/1:13,22:35:99:677,0,379 chr2 216883914 . A T 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.98;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr2 216883924 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 216968676 . C T 55.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=-0.524;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:27:84,0,27 chr2 217039790 . G C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 217046838 . G T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 217075564 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 217301732 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 217444535 . T C 87.28 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.25;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:9:115,9,0 chr2 217444544 . T A 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr2 217529606 . C T 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 217597865 . C A 31.29 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=10.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:59,9,0 chr2 217712734 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 217712852 . T A 2292.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.22;SOR=2.636 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2321,201,0 chr2 217713312 . C T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.23;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 217719222 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 217735497 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 217739524 . A C 2093.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.23;SOR=1.467 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2122,189,0 chr2 217739633 . G A 2312.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.65;SOR=1.252 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2341,231,0 chr2 217751910 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 217755829 . C T 347.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.37;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:376,27,0 chr2 217792777 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 217829573 . C T 178.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.59;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:207,15,0 chr2 217829634 . G A 681.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.14;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:710,51,0 chr2 217829789 . T G 5416.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.57;SOR=1.255 GT:AD:DP:GQ:PL 1/1:0,122:122:99:5445,367,0 chr2 217829968 . A G 2968.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.66;SOR=1.639 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2997,241,0 chr2 217830379 . G A 4301.77 PASS AC=2;AF=1.00;AN=2;DP=137;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.63;SOR=0.723 GT:AD:DP:GQ:PL 1/1:0,136:136:99:4330,407,0 chr2 217830963 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 217831123 . G A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.95;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 217831125 . C A 152.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.79;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:180,12,0 chr2 217832226 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 217839757 . A G 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=-1.282;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,73 chr2 217840255 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 217842000 . G T 1012.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.432;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=6.319;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.33;ReadPosRankSum=-0.857;SOR=0.251 GT:AD:DP:GQ:PL 0/1:35,41:76:99:1041,0,944 chr2 217842134 . T C 1543.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.106;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=1.506;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.78;ReadPosRankSum=-0.073;SOR=0.551 GT:AD:DP:GQ:PL 0/1:50,62:112:99:1572,0,1278 chr2 217847379 . A G 591.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.530;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.09;ReadPosRankSum=-0.569;SOR=0.693 GT:AD:DP:GQ:PL 0/1:12,19:31:99:620,0,372 chr2 217847583 . C T 1811.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.693;ClippingRankSum=0.000;DP=134;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.62;ReadPosRankSum=0.947;SOR=0.646 GT:AD:DP:GQ:PL 0/1:72,61:133:99:1840,0,1967 chr2 217847883 . G A 2724.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.863;ClippingRankSum=0.000;DP=193;ExcessHet=3.0103;FS=9.428;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.12;ReadPosRankSum=0.153;SOR=0.966 GT:AD:DP:GQ:PL 0/1:93,100:193:99:2753,0,2421 chr2 217848003 . A G 2043.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.625;ClippingRankSum=0.000;DP=154;ExcessHet=3.0103;FS=1.289;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.27;ReadPosRankSum=-2.004;SOR=0.862 GT:AD:DP:GQ:PL 0/1:77,77:154:99:2072,0,2134 chr2 217848195 . C T 4010.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.944;ClippingRankSum=0.000;DP=230;ExcessHet=3.0103;FS=1.037;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.44;ReadPosRankSum=0.298;SOR=0.598 GT:AD:DP:GQ:PL 0/1:121,109:230:99:4039,0,5198 chr2 217848213 . C T 4261.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.402;ClippingRankSum=0.000;DP=244;ExcessHet=3.0103;FS=7.077;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.47;ReadPosRankSum=-2.119;SOR=0.407 GT:AD:DP:GQ:PL 0/1:126,118:244:99:4290,0,5281 chr2 217848559 . G A 2800.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.107;ClippingRankSum=0.000;DP=211;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.27;ReadPosRankSum=-1.965;SOR=0.727 GT:AD:DP:GQ:PL 0/1:109,102:211:99:2829,0,2926 chr2 217848924 . C T 1739.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.889;ClippingRankSum=0.000;DP=126;ExcessHet=3.0103;FS=0.661;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.81;ReadPosRankSum=-0.745;SOR=0.618 GT:AD:DP:GQ:PL 0/1:55,71:126:99:1768,0,1468 chr2 217880962 . G A 2606.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.638;ClippingRankSum=0.000;DP=218;ExcessHet=3.0103;FS=4.850;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.01;ReadPosRankSum=1.191;SOR=0.433 GT:AD:DP:GQ:PL 0/1:115,102:217:99:2635,0,3081 chr2 217891827 . A G 65.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:93,9,0 chr2 217893347 . C A 1898.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.066;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=2.951;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.58;ReadPosRankSum=1.133;SOR=0.296 GT:AD:DP:GQ:PL 0/1:48,60:108:99:1927,0,1637 chr2 217899567 . A C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 217903699 . T G 1070.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.035;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=0.830;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.64;ReadPosRankSum=0.714;SOR=0.800 GT:AD:DP:GQ:PL 0/1:49,43:92:99:1099,0,1189 chr2 217905280 . G A 2073.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.241;ClippingRankSum=0.000;DP=180;ExcessHet=3.0103;FS=0.550;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.52;ReadPosRankSum=0.229;SOR=0.705 GT:AD:DP:GQ:PL 0/1:98,82:180:99:2102,0,2772 chr2 217937044 . C T 2757.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.70;SOR=1.429 GT:AD:DP:GQ:PL 1/1:0,87:87:99:2786,261,0 chr2 217979157 . A T 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=-0.524;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr2 217995971 . G A 132.80 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.792;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.97;ReadPosRankSum=-0.366;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,6:7:21:161,0,21 chr2 218012675 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 218015082 . T G 40.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.15;ReadPosRankSum=0.000;SOR=0.368 GT:AD:DP:GQ:PL 0/1:3,2:5:69:69,0,76 chr2 218016229 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 218060426 . G A 1427.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.179;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=2.719;MLEAC=1;MLEAF=0.500;MQ=59.92;MQRankSum=-0.877;QD=14.14;ReadPosRankSum=-0.333;SOR=0.463 GT:AD:DP:GQ:PL 0/1:45,56:101:99:1456,0,1200 chr2 218065252 . T A 44.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.46;ReadPosRankSum=0.385;SOR=0.991 GT:AD:DP:GQ:PL 0/1:3,3:6:73:73,0,73 chr2 218070416 . A G 168.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.825;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.38;ReadPosRankSum=1.852;SOR=0.255 GT:AD:DP:GQ:PL 0/1:12,6:18:99:197,0,414 chr2 218072128 . G C 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-0.241;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr2 218073137 . G T 805.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.428;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.51;ReadPosRankSum=-1.430;SOR=0.594 GT:AD:DP:GQ:PL 0/1:39,31:70:99:834,0,1222 chr2 218074245 . C G 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.068;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=0.712;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:50:188,0,50 chr2 218074788 . A G 159.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.82;ReadPosRankSum=1.068;SOR=1.609 GT:AD:DP:GQ:PL 0/1:2,5:7:62:188,0,62 chr2 218074907 . C T 765.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.957;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=0.572;SOR=0.650 GT:AD:DP:GQ:PL 0/1:29,28:57:99:794,0,940 chr2 218075536 . C T 2748.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.462;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=0.568;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.71;ReadPosRankSum=-0.659;SOR=0.617 GT:AD:DP:GQ:PL 0/1:81,94:175:99:2777,0,2483 chr2 218076372 . C G 488.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.202;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.926;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.96;ReadPosRankSum=1.330;SOR=0.293 GT:AD:DP:GQ:PL 0/1:19,16:35:99:517,0,642 chr2 218115235 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 218115460 . T C 1026.77 PASS AC=2;AF=1.00;AN=2;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.23;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,30:30:90:1055,90,0 chr2 218121354 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 218135587 . C T 12692.77 PASS AC=2;AF=1.00;AN=2;DP=367;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.98;QD=34.77;SOR=0.851 GT:AD:DP:GQ:PL 1/1:0,365:365:99:12721,1093,0 chr2 218136011 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.68;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 218142337 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 218156662 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 218164385 . C G 4303.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.705;ClippingRankSum=0.000;DP=293;ExcessHet=3.0103;FS=0.423;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.69;ReadPosRankSum=1.666;SOR=0.659 GT:AD:DP:GQ:PL 0/1:151,142:293:99:4332,0,4408 chr2 218169146 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 218201240 . C G 396.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.34;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:425,33,0 chr2 218217396 . G T 732.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.400;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=4.218;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.86;ReadPosRankSum=-0.365;SOR=0.267 GT:AD:DP:GQ:PL 0/1:28,29:57:99:761,0,789 chr2 218217607 . A G 1721.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.795;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=3.425;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.23;ReadPosRankSum=1.868;SOR=1.017 GT:AD:DP:GQ:PL 0/1:59,62:121:99:1750,0,1579 chr2 218225699 . G A 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.71;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 218228555 . A G 1113.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.81;SOR=3.126 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1142,96,0 chr2 218234537 . G C 719.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=20.95;SOR=4.514 GT:AD:DP:GQ:PL 1/1:0,19:19:57:748,57,0 chr2 218234761 . T C 888.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.307;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.75;ReadPosRankSum=-0.158;SOR=1.075 GT:AD:DP:GQ:PL 0/1:19,26:45:99:917,0,590 chr2 218238857 . A G 1312.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.206;ClippingRankSum=0.000;DP=101;ExcessHet=3.0103;FS=3.932;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.00;ReadPosRankSum=-0.115;SOR=1.128 GT:AD:DP:GQ:PL 0/1:50,51:101:99:1341,0,1196 chr2 218239335 . T C 746.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.165;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=1.224;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.88;ReadPosRankSum=0.968;SOR=1.009 GT:AD:DP:GQ:PL 0/1:32,26:58:99:775,0,912 chr2 218245832 . A G 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.489;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.10;ReadPosRankSum=0.703;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:173,0,101 chr2 218252759 . G A 631.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.631;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=3.711;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.44;ReadPosRankSum=0.315;SOR=0.120 GT:AD:DP:GQ:PL 0/1:27,20:47:99:660,0,986 chr2 218253218 . A G 638.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.880;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=3.972;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.25;ReadPosRankSum=-1.489;SOR=1.734 GT:AD:DP:GQ:PL 0/1:14,21:35:99:667,0,377 chr2 218263783 . C T 5645.77 PASS AC=2;AF=1.00;AN=2;DP=187;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.35;SOR=1.248 GT:AD:DP:GQ:PL 1/1:0,186:186:99:5674,557,0 chr2 218264337 . A G 691.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.71;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,18:18:54:720,54,0 chr2 218270205 . A G 774.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.407;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.90;ReadPosRankSum=1.708;SOR=0.312 GT:AD:DP:GQ:PL 0/1:18,23:41:99:803,0,658 chr2 218270227 . C T 257.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.995;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.59;ReadPosRankSum=0.236;SOR=0.646 GT:AD:DP:GQ:PL 0/1:21,9:30:99:286,0,851 chr2 218273902 . A G 35.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.94;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:64,0,30 chr2 218274217 . C T 877.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.492;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.860;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.25;ReadPosRankSum=-1.583;SOR=0.804 GT:AD:DP:GQ:PL 0/1:45,33:78:99:906,0,1119 chr2 218274587 . C T 2029.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.121;ClippingRankSum=0.000;DP=184;ExcessHet=3.0103;FS=1.226;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.03;ReadPosRankSum=-0.260;SOR=0.821 GT:AD:DP:GQ:PL 0/1:103,81:184:99:2058,0,2802 chr2 218274850 . G A 1741.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.04;SOR=5.330 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1770,132,0 chr2 218275565 . G C 1903.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.078;ClippingRankSum=0.000;DP=140;ExcessHet=3.0103;FS=1.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.60;ReadPosRankSum=0.877;SOR=0.526 GT:AD:DP:GQ:PL 0/1:67,73:140:99:1932,0,1822 chr2 218276735 . C G 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=1.383;SOR=0.307 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,133 chr2 218276823 . C T 1181.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.79;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1210,96,0 chr2 218277300 . G A 1729.77 PASS AC=2;AF=1.00;AN=2;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.73;SOR=2.786 GT:AD:DP:GQ:PL 1/1:0,47:47:99:1758,141,0 chr2 218277768 . C T 1283.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.261;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=1.494;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.97;ReadPosRankSum=-1.090;SOR=0.702 GT:AD:DP:GQ:PL 0/1:69,48:117:99:1312,0,2681 chr2 218277769 . G A 1933.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.991;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=1.478;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.53;ReadPosRankSum=1.505;SOR=0.785 GT:AD:DP:GQ:PL 0/1:51,66:117:99:1962,0,1857 chr2 218277871 . C T 1487.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.497;ClippingRankSum=0.000;DP=119;ExcessHet=3.0103;FS=1.454;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.50;ReadPosRankSum=0.626;SOR=0.562 GT:AD:DP:GQ:PL 0/1:66,53:119:99:1516,0,1819 chr2 218278050 . C T 712.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.351;ClippingRankSum=0.000;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.29;ReadPosRankSum=0.873;SOR=0.769 GT:AD:DP:GQ:PL 0/1:30,28:58:99:741,0,905 chr2 218278137 . C A 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-1.242;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr2 218278506 . G A 2569.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.766;ClippingRankSum=0.000;DP=243;ExcessHet=3.0103;FS=5.404;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.58;ReadPosRankSum=-0.245;SOR=1.021 GT:AD:DP:GQ:PL 0/1:144,99:243:99:2598,0,3665 chr2 218278604 . T C 2529.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.651;ClippingRankSum=0.000;DP=195;ExcessHet=3.0103;FS=1.159;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.97;ReadPosRankSum=1.490;SOR=0.573 GT:AD:DP:GQ:PL 0/1:92,103:195:99:2558,0,2511 chr2 218279366 . G A 2305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.684;ClippingRankSum=0.000;DP=189;ExcessHet=3.0103;FS=2.711;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.40;ReadPosRankSum=-0.684;SOR=0.486 GT:AD:DP:GQ:PL 0/1:93,93:186:99:2334,0,2508 chr2 218279426 . G A 1069.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.478;ClippingRankSum=0.000;DP=89;ExcessHet=3.0103;FS=1.035;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.16;ReadPosRankSum=1.404;SOR=0.480 GT:AD:DP:GQ:PL 0/1:46,42:88:99:1098,0,1376 chr2 218279507 . A T 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.49;ReadPosRankSum=-0.727;SOR=1.426 GT:AD:DP:GQ:PL 0/1:9,7:16:99:244,0,328 chr2 218279531 . G A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=1.834;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,115 chr2 218279902 . A G 182.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.06;ReadPosRankSum=0.906;SOR=0.569 GT:AD:DP:GQ:PL 0/1:7,6:13:99:211,0,252 chr2 218280092 . T C 5829.77 PASS AC=2;AF=1.00;AN=2;DP=183;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.86;SOR=1.058 GT:AD:DP:GQ:PL 1/1:0,183:183:99:5858,549,0 chr2 218281884 . T C 196.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.634;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.03;ReadPosRankSum=-1.276;SOR=0.569 GT:AD:DP:GQ:PL 0/1:19,9:28:99:225,0,510 chr2 218282080 . G A 184.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.409;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=4.123;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.40;ReadPosRankSum=-1.046;SOR=1.757 GT:AD:DP:GQ:PL 0/1:11,11:22:99:213,0,293 chr2 218282145 . T C 235.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.14;ReadPosRankSum=-2.402;SOR=0.223 GT:AD:DP:GQ:PL 0/1:6,7:13:99:264,0,231 chr2 218282159 . G C 163.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=3.424;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.89;ReadPosRankSum=-1.876;SOR=0.120 GT:AD:DP:GQ:PL 0/1:6,5:11:99:192,0,237 chr2 218282522 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 218289259 . T C 1082.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.437;ClippingRankSum=0.000;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.05;ReadPosRankSum=0.259;SOR=0.836 GT:AD:DP:GQ:PL 0/1:23,37:60:99:1111,0,646 chr2 218295898 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 218303864 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 218304042 . A G 107.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:136,15,0 chr2 218319968 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 218319998 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 218322644 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 218323178 . C T 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr2 218324115 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 218340059 . C T 2470.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.597;ClippingRankSum=0.000;DP=183;ExcessHet=3.0103;FS=1.830;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.50;ReadPosRankSum=-1.524;SOR=0.540 GT:AD:DP:GQ:PL 0/1:87,96:183:99:2499,0,2298 chr2 218342196 . C T 2071.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.42;SOR=1.430 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2100,186,0 chr2 218344670 . A G 2077.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.82;SOR=0.892 GT:AD:DP:GQ:PL 1/1:0,53:53:99:2106,159,0 chr2 218351605 . T C 53.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:81,6,0 chr2 218357400 . C T 765.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.59;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,19:19:57:794,57,0 chr2 218360439 . T C 1467.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.38;SOR=5.838 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1496,111,0 chr2 218360832 . T G 266.28 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.865;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.01;ReadPosRankSum=0.415;SOR=2.948 GT:AD:DP:GQ:PL 0/1:3,16:19:9:294,0,9 chr2 218363033 . T C 4480.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.09;SOR=2.966 GT:AD:DP:GQ:PL 1/1:0,125:125:99:4509,375,0 chr2 218367084 . C T 6781.77 PASS AC=2;AF=1.00;AN=2;DP=205;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.08;SOR=1.379 GT:AD:DP:GQ:PL 1/1:0,205:205:99:6810,615,0 chr2 218367631 . C A 3956.77 PASS AC=2;AF=1.00;AN=2;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.07;SOR=1.654 GT:AD:DP:GQ:PL 1/1:0,108:108:99:3985,325,0 chr2 218389899 . A G 8560.77 PASS AC=2;AF=1.00;AN=2;DP=266;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.18;SOR=0.837 GT:AD:DP:GQ:PL 1/1:0,266:266:99:8589,797,0 chr2 218392965 . T C 2552.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.73;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2581,234,0 chr2 218398554 . A G 2269.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.24;SOR=6.736 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2298,174,0 chr2 218399069 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 218400371 . T C 3706.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.89;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,120:120:99:3735,360,0 chr2 218401055 . T C 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.282;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:4,2:6:66:66,0,98 chr2 218401385 . C G 1591.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.59;SOR=5.994 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1620,120,0 chr2 218401481 . T C 4454.77 PASS AC=2;AF=1.00;AN=2;DP=134;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.24;SOR=1.424 GT:AD:DP:GQ:PL 1/1:0,134:134:99:4483,402,0 chr2 218401909 . C T 454.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.02;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,12:12:36:483,36,0 chr2 218403058 . C T 4148.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.01;SOR=1.460 GT:AD:DP:GQ:PL 1/1:0,122:122:99:4177,365,0 chr2 218403190 . A G 8210.77 PASS AC=2;AF=1.00;AN=2;DP=240;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.21;SOR=1.174 GT:AD:DP:GQ:PL 1/1:0,240:240:99:8239,720,0 chr2 218403975 . A G 598.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.12;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:627,45,0 chr2 218404080 . G A 3518.77 PASS AC=2;AF=1.00;AN=2;DP=92;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.80;SOR=2.059 GT:AD:DP:GQ:PL 1/1:0,92:92:99:3547,279,0 chr2 218423414 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 218423659 . A G 3733.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.94;SOR=2.137 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3762,330,0 chr2 218431112 . G A 2093.77 PASS AC=2;AF=1.00;AN=2;DP=58;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.29;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,58:58:99:2122,174,0 chr2 218433195 . G T 344.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.60;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,9:9:27:373,27,0 chr2 218436504 . A G 3054.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.762;ClippingRankSum=0.000;DP=259;ExcessHet=3.0103;FS=3.458;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.79;ReadPosRankSum=-2.286;SOR=0.909 GT:AD:DP:GQ:PL 0/1:142,117:259:99:3083,0,3755 chr2 218440681 . G C 4988.77 PASS AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.04;SOR=1.755 GT:AD:DP:GQ:PL 1/1:0,151:151:99:5017,453,0 chr2 218454934 . A G 3507.77 PASS AC=2;AF=1.00;AN=2;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.77;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3536,342,0 chr2 218455484 . C A 1270.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.03;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1299,96,0 chr2 218474560 . T C 1224.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.77;SOR=3.545 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1253,96,0 chr2 218488472 . C T 2029.77 PASS AC=2;AF=1.00;AN=2;DP=59;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.40;SOR=2.683 GT:AD:DP:GQ:PL 1/1:0,59:59:99:2058,176,0 chr2 218507041 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 218510295 . C T 251.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.17;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:280,21,0 chr2 218534904 . T C 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.87;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 218568874 . G A 1699.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.00;SOR=2.925 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1728,150,0 chr2 218569165 . C A 2121.77 PASS AC=2;AF=1.00;AN=2;DP=60;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.12;SOR=2.722 GT:AD:DP:GQ:PL 1/1:0,60:60:99:2150,180,0 chr2 218580442 . T C 806.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.01;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:835,60,0 chr2 218581267 . G C 239.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:268,24,0 chr2 218583189 . A G 1248.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.72;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1277,99,0 chr2 218585366 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 218587191 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 218593933 . T C 882.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.21;SOR=6.273 GT:AD:DP:GQ:PL 1/1:0,22:22:66:911,66,0 chr2 218616081 . G C 8489.77 PASS AC=2;AF=1.00;AN=2;DP=263;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.40;SOR=1.637 GT:AD:DP:GQ:PL 1/1:0,262:262:99:8518,786,0 chr2 218621213 . C T 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.99;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 218622576 . A T 2801.77 PASS AC=2;AF=1.00;AN=2;DP=89;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.48;SOR=1.718 GT:AD:DP:GQ:PL 1/1:0,89:89:99:2830,266,0 chr2 218628201 . T C 10892.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-1.062;ClippingRankSum=0.000;DP=338;ExcessHet=3.0103;FS=3.330;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.23;ReadPosRankSum=-0.569;SOR=0.466 GT:AD:DP:GQ:PL 1/1:1,337:338:99:10921,972,0 chr2 218629314 . G A 2375.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.17;SOR=2.939 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2404,198,0 chr2 218629915 . T C 138.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.51;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:166,12,0 chr2 218634036 . T G 5719.77 PASS AC=2;AF=1.00;AN=2;DP=163;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.89;SOR=1.144 GT:AD:DP:GQ:PL 1/1:0,163:163:99:5748,489,0 chr2 218636410 . G A 8262.77 PASS AC=2;AF=1.00;AN=2;DP=245;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.73;SOR=0.734 GT:AD:DP:GQ:PL 1/1:0,245:245:99:8291,735,0 chr2 218636605 . G A 4111.77 PASS AC=2;AF=1.00;AN=2;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.43;SOR=1.323 GT:AD:DP:GQ:PL 1/1:0,123:123:99:4140,369,0 chr2 218641032 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 218644265 . T C 10147.77 PASS AC=2;AF=1.00;AN=2;DP=296;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.40;SOR=1.194 GT:AD:DP:GQ:PL 1/1:0,295:295:99:10176,886,0 chr2 218644895 . C A 11510.77 PASS AC=2;AF=1.00;AN=2;DP=338;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.06;SOR=0.858 GT:AD:DP:GQ:PL 1/1:0,338:338:99:11539,1014,0 chr2 218646045 . A G 2027.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.530;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=30.01;ReadPosRankSum=0.498;SOR=2.376 GT:AD:DP:GQ:PL 1/1:1,56:57:99:2056,130,0 chr2 218646645 . G A 271.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.97;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:300,24,0 chr2 218652365 . T C 3480.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.31;SOR=3.142 GT:AD:DP:GQ:PL 1/1:0,95:95:99:3509,286,0 chr2 218660612 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 218660859 . A G 3776.77 PASS AC=2;AF=1.00;AN=2;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.13;SOR=1.528 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3805,342,0 chr2 218751930 . A G 353.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.248;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=3.882;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.08;ReadPosRankSum=-0.100;SOR=2.368 GT:AD:DP:GQ:PL 0/1:9,13:22:99:382,0,277 chr2 218826843 . A G 1574.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.23;SOR=2.110 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1603,138,0 chr2 218831291 . G A 2666.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.826 GT:AD:DP:GQ:PL 1/1:0,94:94:99:2695,275,0 chr2 218871329 . T C 254.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.115;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=8.820;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=-0.294;SOR=2.815 GT:AD:DP:GQ:PL 0/1:9,8:17:99:283,0,285 chr2 218882255 . C T 4029.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.028;ClippingRankSum=0.000;DP=309;ExcessHet=3.0103;FS=1.347;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.04;ReadPosRankSum=1.322;SOR=0.634 GT:AD:DP:GQ:PL 0/1:156,153:309:99:4058,0,4308 chr2 218980333 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 218980419 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.41;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 218980424 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.25;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 219019742 . C G 2115.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.039;ClippingRankSum=0.000;DP=179;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.82;ReadPosRankSum=-0.122;SOR=0.705 GT:AD:DP:GQ:PL 0/1:100,79:179:99:2144,0,2888 chr2 219019762 . A G 1870.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.414;ClippingRankSum=0.000;DP=152;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.31;ReadPosRankSum=-1.803;SOR=0.696 GT:AD:DP:GQ:PL 0/1:83,69:152:99:1899,0,2429 chr2 219023537 . A G 1099.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.878;ClippingRankSum=0.000;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.27;ReadPosRankSum=-0.591;SOR=0.765 GT:AD:DP:GQ:PL 0/1:34,38:72:99:1128,0,931 chr2 219024300 . C G 601.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.732;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.26;ReadPosRankSum=-0.294;SOR=0.783 GT:AD:DP:GQ:PL 0/1:16,21:37:99:630,0,421 chr2 219025888 . G A 632.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.784;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.08;ReadPosRankSum=-0.770;SOR=0.538 GT:AD:DP:GQ:PL 0/1:15,20:35:99:661,0,513 chr2 219026257 . T C 1104.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.232;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=2.293;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.78;ReadPosRankSum=0.685;SOR=0.389 GT:AD:DP:GQ:PL 0/1:31,39:70:99:1133,0,846 chr2 219029850 . C T 913.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.212;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.856;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.87;ReadPosRankSum=-1.411;SOR=0.583 GT:AD:DP:GQ:PL 0/1:44,33:77:99:942,0,1499 chr2 219030593 . A G 635.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.152;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.87;ReadPosRankSum=0.371;SOR=0.379 GT:AD:DP:GQ:PL 0/1:13,19:32:99:664,0,415 chr2 219030826 . C A 2327.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.194;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=1.812;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.58;ReadPosRankSum=0.780;SOR=0.840 GT:AD:DP:GQ:PL 0/1:90,95:185:99:2356,0,2334 chr2 219030866 . C T 2210.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.912;ClippingRankSum=0.000;DP=146;ExcessHet=3.0103;FS=1.397;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.14;ReadPosRankSum=-0.355;SOR=0.884 GT:AD:DP:GQ:PL 0/1:63,83:146:99:2239,0,1779 chr2 219031161 . C T 2525.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.957;ClippingRankSum=0.000;DP=185;ExcessHet=3.0103;FS=6.292;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.73;ReadPosRankSum=0.105;SOR=0.392 GT:AD:DP:GQ:PL 0/1:89,95:184:99:2554,0,2470 chr2 219031828 . C G 89.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.96;ReadPosRankSum=-0.253;SOR=0.693 GT:AD:DP:GQ:PL 0/1:1,4:5:27:118,0,27 chr2 219032259 . C A 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr2 219035346 . C T 733.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.599;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.48;ReadPosRankSum=1.250;SOR=0.614 GT:AD:DP:GQ:PL 0/1:38,32:70:99:762,0,1001 chr2 219038536 . T G 7861.77 PASS AC=2;AF=1.00;AN=2;DP=253;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.20;SOR=0.792 GT:AD:DP:GQ:PL 1/1:0,252:252:99:7890,755,0 chr2 219039001 . C T 4743.77 PASS AC=2;AF=1.00;AN=2;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.80;SOR=0.746 GT:AD:DP:GQ:PL 1/1:0,154:154:99:4772,460,0 chr2 219039065 . T C 1431.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.403;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=1.538;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.13;ReadPosRankSum=-0.512;SOR=0.521 GT:AD:DP:GQ:PL 0/1:64,54:118:99:1460,0,1691 chr2 219040525 . T C 2048.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.963;ClippingRankSum=0.000;DP=151;ExcessHet=3.0103;FS=2.859;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.57;ReadPosRankSum=0.333;SOR=0.926 GT:AD:DP:GQ:PL 0/1:69,82:151:99:2077,0,1799 chr2 219041344 . C A 763.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.100;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=1.688;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.25;ReadPosRankSum=-0.065;SOR=0.389 GT:AD:DP:GQ:PL 0/1:21,26:47:99:792,0,662 chr2 219055032 . G C 173.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.86;ReadPosRankSum=-1.735;SOR=0.340 GT:AD:DP:GQ:PL 0/1:10,6:16:99:202,0,370 chr2 219055315 . A G 10491.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=318;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.99;ReadPosRankSum=1.790;SOR=0.512 GT:AD:DP:GQ:PL 1/1:1,317:318:99:10520,912,0 chr2 219055690 . A G 2141.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.549;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.529;SOR=0.656 GT:AD:DP:GQ:PL 0/1:54,77:131:99:2170,0,1447 chr2 219055843 . C T 1334.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.010;ClippingRankSum=0.000;DP=114;ExcessHet=3.0103;FS=1.579;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.81;ReadPosRankSum=0.970;SOR=0.523 GT:AD:DP:GQ:PL 0/1:60,53:113:99:1363,0,1627 chr2 219056100 . C T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 219057847 . C A 209.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.246;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=3.039;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.65;ReadPosRankSum=1.620;SOR=1.911 GT:AD:DP:GQ:PL 0/1:11,7:18:99:238,0,367 chr2 219076341 . G A 4776.77 PASS AC=2;AF=1.00;AN=2;DP=148;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.28;SOR=1.340 GT:AD:DP:GQ:PL 1/1:0,148:148:99:4805,443,0 chr2 219146370 . A C 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.10;ReadPosRankSum=-0.319;SOR=0.368 GT:AD:DP:GQ:PL 0/1:5,3:8:99:101,0,175 chr2 219146625 . C A 1207.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.165;ClippingRankSum=0.000;DP=112;ExcessHet=3.0103;FS=0.718;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=0.003;SOR=0.582 GT:AD:DP:GQ:PL 0/1:62,49:111:99:1236,0,1661 chr2 219147394 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219147854 . G C 1310.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.184;ClippingRankSum=0.000;DP=87;ExcessHet=3.0103;FS=3.776;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.07;ReadPosRankSum=0.338;SOR=0.322 GT:AD:DP:GQ:PL 0/1:40,47:87:99:1339,0,1203 chr2 219157352 . A G 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,71 chr2 219157454 . C T 1955.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.31;SOR=3.219 GT:AD:DP:GQ:PL 1/1:0,57:57:99:1984,170,0 chr2 219157713 . G C 1650.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.847;ClippingRankSum=0.000;DP=124;ExcessHet=3.0103;FS=0.702;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.42;ReadPosRankSum=1.180;SOR=0.596 GT:AD:DP:GQ:PL 0/1:65,58:123:99:1679,0,1727 chr2 219157993 . A T 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.446;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.05;ReadPosRankSum=1.700;SOR=1.179 GT:AD:DP:GQ:PL 0/1:11,4:15:74:74,0,380 chr2 219157995 . A T 118.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.852;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=3.090;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.80;ReadPosRankSum=1.004;SOR=1.981 GT:AD:DP:GQ:PL 0/1:7,4:11:99:147,0,281 chr2 219158474 . A C 290.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.054;ClippingRankSum=0.000;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.30;ReadPosRankSum=0.546;SOR=0.602 GT:AD:DP:GQ:PL 0/1:10,9:19:99:319,0,344 chr2 219161647 . G T 487.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.984;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=4.493;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.51;ReadPosRankSum=-1.472;SOR=1.911 GT:AD:DP:GQ:PL 0/1:7,18:25:99:516,0,240 chr2 219161648 . G T 154.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.748;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=4.493;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.19;ReadPosRankSum=1.559;SOR=0.160 GT:AD:DP:GQ:PL 0/1:18,7:25:99:183,0,735 chr2 219162677 . T C 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr2 219163985 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 219164178 . A G 2891.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.02;SOR=1.233 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2920,255,0 chr2 219172671 . A G 6405.77 PASS AC=2;AF=1.00;AN=2;DP=199;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.91;QD=32.35;SOR=0.798 GT:AD:DP:GQ:PL 1/1:0,198:198:99:6434,594,0 chr2 219172722 . G A 2647.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.751;ClippingRankSum=0.000;DP=182;ExcessHet=3.0103;FS=1.163;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.55;ReadPosRankSum=-1.623;SOR=0.579 GT:AD:DP:GQ:PL 0/1:82,100:182:99:2676,0,2325 chr2 219176733 . C T 2832.77 PASS AC=2;AF=1.00;AN=2;DP=85;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.33;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,85:85:99:2861,254,0 chr2 219177206 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219179553 . A C 532.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.658;ClippingRankSum=0.000;DP=51;ExcessHet=3.0103;FS=1.110;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.45;ReadPosRankSum=-1.701;SOR=0.443 GT:AD:DP:GQ:PL 0/1:29,22:51:99:561,0,827 chr2 219180313 . G A 4005.77 PASS AC=2;AF=1.00;AN=2;DP=125;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.05;SOR=1.572 GT:AD:DP:GQ:PL 1/1:0,125:125:99:4034,374,0 chr2 219182118 . G A 5032.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.189;ClippingRankSum=0.000;DP=401;ExcessHet=3.0103;FS=0.361;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.58;ReadPosRankSum=0.523;SOR=0.667 GT:AD:DP:GQ:PL 0/1:210,190:400:99:5061,0,5732 chr2 219191507 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 219205579 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 219207081 . C G 2422.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2451,204,0 chr2 219208044 . G T 4014.77 PASS AC=2;AF=1.00;AN=2;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.28;SOR=1.356 GT:AD:DP:GQ:PL 1/1:0,114:114:99:4043,342,0 chr2 219213774 . T C 2718.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.13;SOR=1.577 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2747,216,0 chr2 219216608 . C G 1614.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.703;ClippingRankSum=0.000;DP=113;ExcessHet=3.0103;FS=0.703;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.29;ReadPosRankSum=0.236;SOR=0.817 GT:AD:DP:GQ:PL 0/1:59,54:113:99:1643,0,1924 chr2 219218557 . C T 7543.77 PASS AC=2;AF=1.00;AN=2;DP=226;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.38;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,226:226:99:7572,677,0 chr2 219218731 . G T 2584.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.60;SOR=3.167 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2613,219,0 chr2 219218933 . C T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 219219092 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 219220180 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 219221123 . A G 5858.77 PASS AC=2;AF=1.00;AN=2;DP=180;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.55;SOR=0.761 GT:AD:DP:GQ:PL 1/1:0,180:180:99:5887,540,0 chr2 219221819 . A G 219.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.623;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.65;ReadPosRankSum=-0.848;SOR=0.582 GT:AD:DP:GQ:PL 0/1:8,7:15:99:248,0,253 chr2 219223526 . A G 3416.77 PASS AC=2;AF=1.00;AN=2;DP=104;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.85;SOR=1.314 GT:AD:DP:GQ:PL 1/1:0,104:104:99:3445,312,0 chr2 219224963 . G C 6268.77 PASS AC=2;AF=1.00;AN=2;DP=183;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=0.844 GT:AD:DP:GQ:PL 1/1:0,183:183:99:6297,550,0 chr2 219236065 . C T 1741.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.033;ClippingRankSum=0.000;DP=170;ExcessHet=3.0103;FS=2.907;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.25;ReadPosRankSum=-1.757;SOR=0.485 GT:AD:DP:GQ:PL 0/1:99,71:170:99:1770,0,2844 chr2 219243701 . C T 846.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.528;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=4.580;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.29;ReadPosRankSum=-0.109;SOR=1.513 GT:AD:DP:GQ:PL 0/1:47,28:75:99:875,0,1395 chr2 219243792 . A G 354.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.02;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:383,30,0 chr2 219248520 . T G 4173.77 PASS AC=2;AF=1.00;AN=2;DP=126;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.13;SOR=1.888 GT:AD:DP:GQ:PL 1/1:0,126:126:99:4202,378,0 chr2 219249136 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219252611 . T G 698.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.92;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,19:19:57:727,57,0 chr2 219253809 . G C 2451.77 PASS AC=2;AF=1.00;AN=2;DP=77;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.84;SOR=0.887 GT:AD:DP:GQ:PL 1/1:0,77:77:99:2480,231,0 chr2 219270486 . C T 4616.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.48;SOR=4.461 GT:AD:DP:GQ:PL 1/1:0,121:121:99:4645,364,0 chr2 219271433 . T C 21246.77 PASS AC=2;AF=1.00;AN=2;DP=654;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=49.34;QD=32.54;SOR=1.101 GT:AD:DP:GQ:PL 1/1:0,653:653:99:21275,1958,0 chr2 219271629 . G A 6713.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.557;ClippingRankSum=0.000;DP=496;ExcessHet=3.0103;FS=1.152;MLEAC=1;MLEAF=0.500;MQ=59.96;MQRankSum=1.365;QD=13.56;ReadPosRankSum=-0.730;SOR=0.791 GT:AD:DP:GQ:PL 0/1:257,238:495:99:6742,0,7377 chr2 219271649 . T C 15340.77 PASS AC=2;AF=1.00;AN=2;DP=439;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.96;QD=29.17;SOR=1.477 GT:AD:DP:GQ:PL 1/1:0,438:438:99:15369,1315,0 chr2 219272114 . G T 506.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.187;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=5.780;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.49;ReadPosRankSum=1.144;SOR=2.833 GT:AD:DP:GQ:PL 0/1:10,16:26:99:535,0,255 chr2 219282444 . T C 263.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.84;ReadPosRankSum=0.792;SOR=0.976 GT:AD:DP:GQ:PL 0/1:6,8:14:99:292,0,208 chr2 219285065 . C G 1588.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.331;ClippingRankSum=0.000;DP=110;ExcessHet=3.0103;FS=2.490;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.44;ReadPosRankSum=0.638;SOR=0.473 GT:AD:DP:GQ:PL 0/1:52,58:110:99:1617,0,1364 chr2 219287136 . T C 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr2 219290383 . G A 2074.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.477;ClippingRankSum=0.000;DP=117;ExcessHet=3.0103;FS=7.211;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.73;ReadPosRankSum=-0.429;SOR=0.809 GT:AD:DP:GQ:PL 0/1:46,71:117:99:2103,0,1214 chr2 219291112 . T C 524.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.472;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.44;ReadPosRankSum=0.333;SOR=0.743 GT:AD:DP:GQ:PL 0/1:11,16:27:99:553,0,306 chr2 219291424 . G A 3446.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.438;ClippingRankSum=0.000;DP=329;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.54;ReadPosRankSum=0.822;SOR=0.698 GT:AD:DP:GQ:PL 0/1:184,143:327:99:3475,0,4853 chr2 219291699 . G A 158.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.545;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.21;ReadPosRankSum=0.158;SOR=0.223 GT:AD:DP:GQ:PL 0/1:6,7:13:99:187,0,212 chr2 219291752 . C G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 219295922 . G T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.26;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:71,0,33 chr2 219297293 . C G 2950.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.012;ClippingRankSum=0.000;DP=248;ExcessHet=3.0103;FS=15.268;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.90;ReadPosRankSum=0.508;SOR=0.880 GT:AD:DP:GQ:PL 0/1:137,111:248:99:2979,0,3836 chr2 219298237 . G A 661.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.135;ClippingRankSum=0.000;DP=38;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.41;ReadPosRankSum=0.000;SOR=0.957 GT:AD:DP:GQ:PL 0/1:17,21:38:99:690,0,493 chr2 219298785 . C T 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=-1.611;SOR=0.693 GT:AD:DP:GQ:PL 0/1:5,5:10:99:167,0,179 chr2 219298868 . C T 847.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.203;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.18;ReadPosRankSum=0.813;SOR=1.005 GT:AD:DP:GQ:PL 0/1:18,24:42:99:876,0,613 chr2 219301041 . T C 1358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.607;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=0.860;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.30;ReadPosRankSum=-1.271;SOR=0.893 GT:AD:DP:GQ:PL 0/1:46,49:95:99:1387,0,1222 chr2 219301232 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.967;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 219303894 . C T 3491.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.770;ClippingRankSum=0.000;DP=328;ExcessHet=3.0103;FS=1.362;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.65;ReadPosRankSum=-0.319;SOR=0.607 GT:AD:DP:GQ:PL 0/1:187,141:328:99:3520,0,4887 chr2 219307854 . A C 2537.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.206;ClippingRankSum=0.000;DP=191;ExcessHet=3.0103;FS=1.119;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.29;ReadPosRankSum=-0.258;SOR=0.799 GT:AD:DP:GQ:PL 0/1:94,97:191:99:2566,0,2373 chr2 219308009 . A G 1419.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.358;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.53;ReadPosRankSum=0.230;SOR=0.794 GT:AD:DP:GQ:PL 0/1:32,49:81:99:1448,0,883 chr2 219309183 . C T 1318.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.029;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=41.709;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.35;ReadPosRankSum=0.430;SOR=0.218 GT:AD:DP:GQ:PL 0/1:21,55:76:99:1347,0,461 chr2 219309334 . T C 621.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.129;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.80;ReadPosRankSum=2.699;SOR=0.693 GT:AD:DP:GQ:PL 0/1:21,21:42:99:650,0,550 chr2 219330724 . C G 1471.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.459;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.47;ReadPosRankSum=0.406;SOR=0.665 GT:AD:DP:GQ:PL 0/1:63,55:118:99:1500,0,1693 chr2 219332485 . T C 549.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.235;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=9.774;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.10;ReadPosRankSum=-1.751;SOR=2.072 GT:AD:DP:GQ:PL 0/1:19,20:39:99:578,0,474 chr2 219332599 . C T 1243.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.563;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.878;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.55;ReadPosRankSum=0.324;SOR=0.556 GT:AD:DP:GQ:PL 0/1:34,46:80:99:1272,0,1043 chr2 219332666 . C A 1505.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.326;ClippingRankSum=0.000;DP=104;ExcessHet=3.0103;FS=2.554;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.48;ReadPosRankSum=-0.009;SOR=0.715 GT:AD:DP:GQ:PL 0/1:48,56:104:99:1534,0,1250 chr2 219332770 . C G 1255.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.761;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.95;ReadPosRankSum=0.082;SOR=0.652 GT:AD:DP:GQ:PL 0/1:43,47:90:99:1284,0,1287 chr2 219332950 . A G 331.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.198;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.37;ReadPosRankSum=-0.214;SOR=0.763 GT:AD:DP:GQ:PL 0/1:17,15:32:99:360,0,423 chr2 219333008 . G C 202.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.127;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=1.760;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.82;ReadPosRankSum=-0.873;SOR=1.112 GT:AD:DP:GQ:PL 0/1:15,8:23:99:231,0,489 chr2 219348611 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 219351127 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219361671 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219372034 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 219372042 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 219374600 . G A 52.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:80,6,0 chr2 219374812 . G A 2887.77 PASS AC=2;AF=1.00;AN=2;DP=78;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.46;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,78:78:99:2916,234,0 chr2 219374839 . C G 3949.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.72;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3978,331,0 chr2 219381496 . T C 13988.77 PASS AC=2;AF=1.00;AN=2;DP=443;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.58;SOR=0.698 GT:AD:DP:GQ:PL 1/1:0,443:443:99:14017,1330,0 chr2 219382919 . T G 178.90 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.45;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:207,15,0 chr2 219383473 . C T 516.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.03;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:545,39,0 chr2 219384205 . A G 597.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.77;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,15:15:45:626,45,0 chr2 219384607 . C T 1616.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.35;SOR=7.378 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1645,120,0 chr2 219385186 . T C 1087.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.68;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1116,84,0 chr2 219385195 . G A 518.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.991;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=3.675;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=0.283;SOR=1.609 GT:AD:DP:GQ:PL 0/1:16,18:34:99:547,0,430 chr2 219385600 . C A 9007.77 PASS AC=2;AF=1.00;AN=2;DP=284;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.72;SOR=0.736 GT:AD:DP:GQ:PL 1/1:0,284:284:99:9036,851,0 chr2 219386104 . G A 3973.77 PASS AC=2;AF=1.00;AN=2;DP=122;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.57;SOR=1.749 GT:AD:DP:GQ:PL 1/1:0,122:122:99:4002,364,0 chr2 219386456 . T C 5976.77 PASS AC=2;AF=1.00;AN=2;DP=186;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.31;SOR=1.402 GT:AD:DP:GQ:PL 1/1:0,185:185:99:6005,555,0 chr2 219386486 . T C 5242.77 PASS AC=2;AF=1.00;AN=2;DP=154;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.04;SOR=1.519 GT:AD:DP:GQ:PL 1/1:0,154:154:99:5271,463,0 chr2 219399690 . A G 4146.77 PASS AC=2;AF=1.00;AN=2;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.27;SOR=0.710 GT:AD:DP:GQ:PL 1/1:0,121:121:99:4175,363,0 chr2 219409811 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 219409844 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219417599 . G A 132.81 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=18.97;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:20:161,20,0 chr2 219418537 . A G 1068.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.40;SOR=1.473 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1097,96,0 chr2 219418555 . T C 1369.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.24;SOR=1.788 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1398,120,0 chr2 219419104 . T G 2456.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.71;SOR=0.908 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2485,240,0 chr2 219419995 . G C 1079.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.21;SOR=3.841 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1108,87,0 chr2 219420057 . C T 2879.77 PASS AC=2;AF=1.00;AN=2;DP=83;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.97;SOR=2.419 GT:AD:DP:GQ:PL 1/1:0,82:82:99:2908,246,0 chr2 219426752 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219441691 . G T 2072.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.43;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2101,186,0 chr2 219443859 . A C 1391.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.68;SOR=5.728 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1420,105,0 chr2 219444067 . A G 1689.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.432;ClippingRankSum=0.000;DP=131;ExcessHet=3.0103;FS=5.601;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.90;ReadPosRankSum=0.802;SOR=0.363 GT:AD:DP:GQ:PL 0/1:66,65:131:99:1718,0,1726 chr2 219451248 . G A 9798.77 PASS AC=2;AF=1.00;AN=2;DP=315;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.11;SOR=1.557 GT:AD:DP:GQ:PL 1/1:0,315:315:99:9827,941,0 chr2 219451857 . C T 2338.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.41;SOR=2.173 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2367,210,0 chr2 219460662 . C A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 219460687 . C T 72.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:100,9,0 chr2 219462200 . G A 2641.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.478;ClippingRankSum=0.000;DP=236;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.24;ReadPosRankSum=1.107;SOR=0.651 GT:AD:DP:GQ:PL 0/1:138,97:235:99:2670,0,4028 chr2 219462540 . C T 635.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.16;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:664,51,0 chr2 219465924 . C T 1612.77 PASS AC=2;AF=1.00;AN=2;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.25;SOR=2.712 GT:AD:DP:GQ:PL 1/1:0,36:36:99:1641,111,0 chr2 219465939 . A G 2093.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.89;SOR=2.880 GT:AD:DP:GQ:PL 1/1:0,49:49:99:2122,147,0 chr2 219466002 . C T 4896.77 PASS AC=2;AF=1.00;AN=2;DP=153;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.01;SOR=1.417 GT:AD:DP:GQ:PL 1/1:0,153:153:99:4925,459,0 chr2 219466082 . T C 7582.77 PASS AC=2;AF=1.00;AN=2;DP=257;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.74;SOR=0.852 GT:AD:DP:GQ:PL 1/1:0,255:255:99:7611,764,0 chr2 219467733 . C G 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.51;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 219469228 . T C 11078.77 PASS AC=2;AF=1.00;AN=2;DP=342;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.58;SOR=1.227 GT:AD:DP:GQ:PL 1/1:0,340:340:99:11107,1020,0 chr2 219470122 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219472474 . G A 426.77 PASS AC=2;AF=1.00;AN=2;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.53;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,12:12:36:455,36,0 chr2 219480395 . T G 268.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.488;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.80;ReadPosRankSum=-0.626;SOR=1.071 GT:AD:DP:GQ:PL 0/1:13,8:21:99:297,0,934 chr2 219480396 . T C 268.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.209;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.80;ReadPosRankSum=-0.626;SOR=1.071 GT:AD:DP:GQ:PL 0/1:13,8:21:99:297,0,934 chr2 219481874 . C T 1396.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.16;SOR=3.556 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1425,117,0 chr2 219482092 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219485730 . C T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.92;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 219488382 . A G 4614.77 PASS AC=2;AF=1.00;AN=2;DP=128;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.67;SOR=1.092 GT:AD:DP:GQ:PL 1/1:0,128:128:99:4643,385,0 chr2 219492084 . C T 7801.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.987;ClippingRankSum=0.000;DP=240;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.51;ReadPosRankSum=-0.542;SOR=0.303 GT:AD:DP:GQ:PL 1/1:1,239:240:99:7830,677,0 chr2 219496543 . A G 2915.77 PASS AC=2;AF=1.00;AN=2;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.09;SOR=3.042 GT:AD:DP:GQ:PL 1/1:0,80:80:99:2944,240,0 chr2 219496622 . G A 814.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.61;SOR=1.230 GT:AD:DP:GQ:PL 1/1:0,21:21:63:843,63,0 chr2 219496713 . C G 3528.77 PASS AC=2;AF=1.00;AN=2;DP=90;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.59;SOR=5.000 GT:AD:DP:GQ:PL 1/1:0,90:90:99:3557,271,0 chr2 219498177 . C G 25534.77 PASS AC=2;AF=1.00;AN=2;DP=808;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.64;SOR=1.148 GT:AD:DP:GQ:PL 1/1:0,807:807:99:25563,2421,0 chr2 219502231 . G C 2223.77 PASS AC=2;AF=1.00;AN=2;DP=57;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.18;SOR=4.768 GT:AD:DP:GQ:PL 1/1:0,57:57:99:2252,171,0 chr2 219504498 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219506459 . T A 4689.77 PASS AC=2;AF=1.00;AN=2;DP=137;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.48;SOR=1.887 GT:AD:DP:GQ:PL 1/1:0,136:136:99:4718,408,0 chr2 219510998 . A G 88.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.01;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:116,12,0 chr2 219511132 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 219514838 . C G 8903.77 PASS AC=2;AF=1.00;AN=2;DP=279;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.91;SOR=0.790 GT:AD:DP:GQ:PL 1/1:0,279:279:99:8932,837,0 chr2 219515403 . G A 1975.77 PASS AC=2;AF=1.00;AN=2;DP=51;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.56;SOR=4.133 GT:AD:DP:GQ:PL 1/1:0,51:51:99:2004,153,0 chr2 219520498 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219533089 . T C 1960.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.07;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1989,156,0 chr2 219535683 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219537029 . G A 8428.77 PASS AC=2;AF=1.00;AN=2;DP=260;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.42;SOR=1.241 GT:AD:DP:GQ:PL 1/1:0,260:260:99:8457,779,0 chr2 219537902 . G T 3778.77 PASS AC=2;AF=1.00;AN=2;DP=110;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.35;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,110:110:99:3807,326,0 chr2 219539659 . A G 7432.77 PASS AC=2;AF=1.00;AN=2;DP=223;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.33;SOR=0.739 GT:AD:DP:GQ:PL 1/1:0,223:223:99:7461,668,0 chr2 219539926 . C T 4509.77 PASS AC=2;AF=1.00;AN=2;DP=139;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.44;SOR=1.038 GT:AD:DP:GQ:PL 1/1:0,139:139:99:4538,416,0 chr2 219540004 . G A 3944.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.51;SOR=1.138 GT:AD:DP:GQ:PL 1/1:0,111:111:99:3973,332,0 chr2 219540508 . G A 8676.77 PASS AC=2;AF=1.00;AN=2;DP=250;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.71;SOR=0.981 GT:AD:DP:GQ:PL 1/1:0,250:250:99:8705,751,0 chr2 219540599 . T C 7257.77 PASS AC=2;AF=1.00;AN=2;DP=217;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.45;SOR=0.799 GT:AD:DP:GQ:PL 1/1:0,217:217:99:7286,651,0 chr2 219541039 . G A 2116.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.547;ClippingRankSum=0.000;DP=176;ExcessHet=3.0103;FS=5.491;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.03;ReadPosRankSum=-0.520;SOR=1.123 GT:AD:DP:GQ:PL 0/1:93,83:176:99:2145,0,2412 chr2 219541366 . T C 1045.77 PASS AC=2;AF=1.00;AN=2;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.28;SOR=5.136 GT:AD:DP:GQ:PL 1/1:0,26:26:78:1074,78,0 chr2 219541422 . A G 2595.77 PASS AC=2;AF=1.00;AN=2;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.54;SOR=2.770 GT:AD:DP:GQ:PL 1/1:0,71:71:99:2624,213,0 chr2 219542222 . G A 1609.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.99;SOR=0.780 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1638,139,0 chr2 219544979 . C T 1302.77 PASS AC=2;AF=1.00;AN=2;DP=37;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.07;SOR=2.494 GT:AD:DP:GQ:PL 1/1:0,37:37:99:1331,111,0 chr2 219547534 . T C 1542.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.67;SOR=1.136 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1571,156,0 chr2 219548939 . C T 2583.77 PASS AC=2;AF=1.00;AN=2;DP=68;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.08;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,68:68:99:2612,205,0 chr2 219549294 . C T 10445.77 PASS AC=2;AF=1.00;AN=2;DP=235;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.05;SOR=1.856 GT:AD:DP:GQ:PL 1/1:0,234:234:99:10474,704,0 chr2 219549297 . T C 10468.77 PASS AC=2;AF=1.00;AN=2;DP=233;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.88;SOR=1.905 GT:AD:DP:GQ:PL 1/1:0,232:232:99:10497,707,0 chr2 219550924 . T C 2314.77 PASS AC=2;AF=1.00;AN=2;DP=70;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.07;SOR=1.418 GT:AD:DP:GQ:PL 1/1:0,70:70:99:2343,210,0 chr2 219551030 . C T 647.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.94;SOR=3.383 GT:AD:DP:GQ:PL 1/1:0,17:17:51:676,51,0 chr2 219551112 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 219551442 . T C 569.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.65;SOR=0.914 GT:AD:DP:GQ:PL 1/1:0,18:18:54:598,54,0 chr2 219551848 . C T 2326.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.83;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2355,186,0 chr2 219551869 . C T 2356.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.39;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2385,186,0 chr2 219552081 . A T 6813.77 PASS AC=2;AF=1.00;AN=2;DP=212;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.29;SOR=0.703 GT:AD:DP:GQ:PL 1/1:0,211:211:99:6842,633,0 chr2 219552220 . G C 4676.77 PASS AC=2;AF=1.00;AN=2;DP=149;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.39;SOR=1.314 GT:AD:DP:GQ:PL 1/1:0,149:149:99:4705,447,0 chr2 219552506 . G T 2813.77 PASS AC=2;AF=1.00;AN=2;DP=75;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.99;SOR=2.211 GT:AD:DP:GQ:PL 1/1:0,75:75:99:2842,226,0 chr2 219552544 . C T 3731.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.75;SOR=1.755 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3760,301,0 chr2 219553189 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219554514 . T C 8767.77 PASS AC=2;AF=1.00;AN=2;DP=275;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.88;SOR=0.961 GT:AD:DP:GQ:PL 1/1:0,275:275:99:8796,825,0 chr2 219554617 . T C 8995.77 PASS AC=2;AF=1.00;AN=2;DP=272;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.07;SOR=1.129 GT:AD:DP:GQ:PL 1/1:0,272:272:99:9024,816,0 chr2 219554831 . C T 890.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.40;SOR=4.804 GT:AD:DP:GQ:PL 1/1:0,22:22:66:919,66,0 chr2 219556063 . G A 4115.77 PASS AC=2;AF=1.00;AN=2;DP=120;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.30;SOR=0.726 GT:AD:DP:GQ:PL 1/1:0,120:120:99:4144,360,0 chr2 219556234 . A G 3792.77 PASS AC=2;AF=1.00;AN=2;DP=109;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.80;SOR=0.912 GT:AD:DP:GQ:PL 1/1:0,109:109:99:3821,327,0 chr2 219556757 . A G 8282.77 PASS AC=2;AF=1.00;AN=2;DP=232;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.52;SOR=2.725 GT:AD:DP:GQ:PL 1/1:0,232:232:99:8311,697,0 chr2 219556917 . A G 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.60;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 219557678 . C G 2164.77 PASS AC=2;AF=1.00;AN=2;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.07;SOR=2.066 GT:AD:DP:GQ:PL 1/1:0,56:56:99:2193,168,0 chr2 219558052 . A G 7021.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=0.710;ClippingRankSum=0.000;DP=253;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=28.20;ReadPosRankSum=0.615;SOR=0.431 GT:AD:DP:GQ:PL 1/1:3,246:249:99:7050,649,0 chr2 219558645 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219558982 . A G 1422.77 PASS AC=2;AF=1.00;AN=2;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.34;SOR=2.007 GT:AD:DP:GQ:PL 1/1:0,44:44:99:1451,132,0 chr2 219560759 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 219561274 . C A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 219561510 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219561648 . C T 231.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.98;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:260,18,0 chr2 219562625 . G T 5672.77 PASS AC=2;AF=1.00;AN=2;DP=177;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.05;SOR=1.013 GT:AD:DP:GQ:PL 1/1:0,177:177:99:5701,531,0 chr2 219562673 . G A 5187.77 PASS AC=2;AF=1.00;AN=2;DP=159;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.63;SOR=1.054 GT:AD:DP:GQ:PL 1/1:0,159:159:99:5216,477,0 chr2 219563274 . T C 1064.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.00;SOR=4.407 GT:AD:DP:GQ:PL 1/1:0,28:28:84:1093,84,0 chr2 219565481 . C T 7508.77 PASS AC=2;AF=1.00;AN=2;DP=233;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.23;SOR=1.107 GT:AD:DP:GQ:PL 1/1:0,233:233:99:7537,697,0 chr2 219567197 . A G 3429.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.99;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,88:88:99:3458,265,0 chr2 219570312 . A G 16459.77 PASS AC=2;AF=1.00;AN=2;DP=502;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.79;SOR=0.883 GT:AD:DP:GQ:PL 1/1:0,502:502:99:16488,1507,0 chr2 219572251 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 219572359 . C T 660.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.03;SOR=1.931 GT:AD:DP:GQ:PL 1/1:0,22:22:65:689,65,0 chr2 219574956 . C T 3401.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=24.85;SOR=1.265 GT:AD:DP:GQ:PL 1/1:0,94:94:99:3430,282,0 chr2 219590519 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 219597918 . G T 8566.77 PASS AC=2;AF=1.00;AN=2;DP=272;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.50;SOR=0.708 GT:AD:DP:GQ:PL 1/1:0,272:272:99:8595,814,0 chr2 219601477 . G T 10656.77 PASS AC=2;AF=1.00;AN=2;DP=330;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.29;SOR=1.074 GT:AD:DP:GQ:PL 1/1:0,330:330:99:10685,990,0 chr2 219605900 . A G 2368.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.184;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.42;ReadPosRankSum=0.381;SOR=0.655 GT:AD:DP:GQ:PL 0/1:56,80:136:99:2397,0,1563 chr2 219606394 . C G 3044.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.46;SOR=0.807 GT:AD:DP:GQ:PL 1/1:0,91:91:99:3073,272,0 chr2 219607874 . G T 430.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.10;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,11:11:33:459,33,0 chr2 219608633 . G A 2042.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.836;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=4.667;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.61;ReadPosRankSum=2.159;SOR=0.411 GT:AD:DP:GQ:PL 0/1:82,80:162:99:2071,0,2458 chr2 219608931 . C T 719.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.72;SOR=0.793 GT:AD:DP:GQ:PL 1/1:0,19:19:57:748,57,0 chr2 219611416 . G A 218.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.17;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,6:6:18:247,18,0 chr2 219611721 . C T 14113.77 PASS AC=2;AF=1.00;AN=2;DP=475;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.71;SOR=0.994 GT:AD:DP:GQ:PL 1/1:0,475:475:99:14142,1417,0 chr2 219611923 . T C 8042.77 PASS AC=2;AF=1.00;AN=2;DP=242;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.23;SOR=1.421 GT:AD:DP:GQ:PL 1/1:0,242:242:99:8071,726,0 chr2 219612286 . C T 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr2 219614590 . T C 10959.77 PASS AC=2;AF=1.00;AN=2;DP=352;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.14;SOR=0.838 GT:AD:DP:GQ:PL 1/1:0,352:352:99:10988,1056,0 chr2 219615172 . C A 1057.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.462;ClippingRankSum=0.000;DP=90;ExcessHet=3.0103;FS=1.763;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.75;ReadPosRankSum=-1.369;SOR=0.970 GT:AD:DP:GQ:PL 0/1:49,41:90:99:1086,0,1402 chr2 219615917 . T C 4260.77 PASS AC=2;AF=1.00;AN=2;DP=126;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.82;SOR=0.976 GT:AD:DP:GQ:PL 1/1:0,126:126:99:4289,378,0 chr2 219615971 . G C 3565.77 PASS AC=2;AF=1.00;AN=2;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.11;SOR=0.775 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3594,301,0 chr2 219629396 . A C 2147.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-1.025;ClippingRankSum=0.000;DP=92;ExcessHet=3.0103;FS=2.412;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=25.57;ReadPosRankSum=1.037;SOR=0.844 GT:AD:DP:GQ:PL 1/1:3,81:84:99:2176,162,0 chr2 219630445 . A C 1301.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.54;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1330,120,0 chr2 219635486 . C A 2005.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.623;ClippingRankSum=0.000;DP=173;ExcessHet=3.0103;FS=5.407;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.59;ReadPosRankSum=0.616;SOR=0.420 GT:AD:DP:GQ:PL 0/1:90,83:173:99:2034,0,2724 chr2 219635704 . A G 5032.77 PASS AC=2;AF=1.00;AN=2;DP=158;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.85;SOR=0.744 GT:AD:DP:GQ:PL 1/1:0,158:158:99:5061,474,0 chr2 219637321 . T C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 219637415 . C T 2350.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.04;SOR=4.548 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2379,186,0 chr2 219637645 . A C 9799.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=1.299;ClippingRankSum=0.000;DP=308;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.03;ReadPosRankSum=-0.798;SOR=0.941 GT:AD:DP:GQ:PL 1/1:2,304:306:99:9828,869,0 chr2 219640543 . T C 9290.77 PASS AC=2;AF=1.00;AN=2;DP=289;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.15;SOR=0.772 GT:AD:DP:GQ:PL 1/1:0,289:289:99:9319,868,0 chr2 219702670 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 219704302 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 219704335 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219704423 . A C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 219721509 . C G 681.77 PASS AC=2;AF=1.00;AN=2;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.12;SOR=5.784 GT:AD:DP:GQ:PL 1/1:0,17:17:51:710,51,0 chr2 219721722 . G A 346.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.358;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.51;ReadPosRankSum=-0.929;SOR=0.582 GT:AD:DP:GQ:PL 0/1:20,13:33:99:375,0,602 chr2 219747920 . G C 65.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.76;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:93,9,0 chr2 219795514 . C T 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 219850971 . C A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219864656 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219895876 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 219904945 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 219906214 . A T 222.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.75;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:251,18,0 chr2 219906502 . C T 3668.77 PASS AC=2;AF=1.00;AN=2;DP=113;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=1.035 GT:AD:DP:GQ:PL 1/1:0,113:113:99:3697,339,0 chr2 219906569 . G A 3321.77 PASS AC=2;AF=1.00;AN=2;DP=99;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.55;SOR=0.985 GT:AD:DP:GQ:PL 1/1:0,99:99:99:3350,297,0 chr2 219906589 . A G 3086.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.19;SOR=0.953 GT:AD:DP:GQ:PL 1/1:0,93:93:99:3115,279,0 chr2 219906657 . A G 2176.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.49;SOR=0.917 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2205,201,0 chr2 219906854 . C T 75.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.82;ReadPosRankSum=1.068;SOR=0.495 GT:AD:DP:GQ:PL 0/1:4,3:7:99:104,0,146 chr2 219947461 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 219997688 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 220318643 . A G 52.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.967;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.59;ReadPosRankSum=0.000;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,2:3:33:81,0,33 chr2 220318664 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 220620450 . C T 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.383;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.000;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:37:72,0,37 chr2 220874003 . A C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 221199891 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 221199895 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 221307643 . T C 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.524;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 221354167 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 221354184 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 221355480 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 221355488 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 221392435 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 221392578 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 221434304 . G A 1022.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.176;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=0.892;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.28;ReadPosRankSum=-0.905;SOR=0.518 GT:AD:DP:GQ:PL 0/1:37,40:77:99:1051,0,973 chr2 221442590 . C A 356.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.591;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=6.690;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.99;ReadPosRankSum=-1.452;SOR=2.833 GT:AD:DP:GQ:PL 0/1:10,11:21:99:385,0,316 chr2 221446346 . G A 132.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.465;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=1.833;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.32;ReadPosRankSum=0.948;SOR=1.230 GT:AD:DP:GQ:PL 0/1:14,7:21:99:161,0,317 chr2 221502763 . G A 738.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.880;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.687;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.42;ReadPosRankSum=-1.068;SOR=0.394 GT:AD:DP:GQ:PL 0/1:20,25:45:99:767,0,632 chr2 221563612 . G A 275.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.355;ClippingRankSum=0.000;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.24;ReadPosRankSum=0.000;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,10:16:99:304,0,203 chr2 221566801 . G A 283.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.892;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=2.969;MLEAC=1;MLEAF=0.500;MQ=59.24;MQRankSum=-0.686;QD=13.51;ReadPosRankSum=-0.589;SOR=0.180 GT:AD:DP:GQ:PL 0/1:8,13:21:99:312,0,312 chr2 221566854 . G A 94.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=55.68;MQRankSum=-0.319;QD=23.69;ReadPosRankSum=0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:71:123,0,71 chr2 221570328 . A G 127.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.792;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.97;ReadPosRankSum=-0.816;SOR=1.981 GT:AD:DP:GQ:PL 0/1:4,4:8:99:156,0,160 chr2 221572446 . C A 337.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.87;ReadPosRankSum=-0.342;SOR=1.061 GT:AD:DP:GQ:PL 0/1:7,10:17:99:366,0,232 chr2 222010996 . A G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 222085003 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 222106276 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 222121395 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.000;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 222124633 . G C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 222155561 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 222155640 . A G 93.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=23.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:121,12,0 chr2 222201518 . G A 1382.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.569;ClippingRankSum=0.000;DP=108;ExcessHet=3.0103;FS=5.342;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.80;ReadPosRankSum=0.050;SOR=1.284 GT:AD:DP:GQ:PL 0/1:58,50:108:99:1411,0,1537 chr2 222220114 . C T 838.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.745;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=6.911;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.72;ReadPosRankSum=2.352;SOR=0.066 GT:AD:DP:GQ:PL 0/1:31,26:57:99:867,0,1106 chr2 222231990 . G C 556.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.53;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:585,42,0 chr2 222294400 . C A 569.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.837;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=3.726;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.83;ReadPosRankSum=1.235;SOR=0.215 GT:AD:DP:GQ:PL 0/1:15,21:36:99:598,0,472 chr2 222296905 . A G 351.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-3.056;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=4.483;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.53;ReadPosRankSum=-0.416;SOR=0.174 GT:AD:DP:GQ:PL 0/1:11,15:26:99:380,0,382 chr2 222297170 . A G 3540.77 PASS AC=2;AF=1.00;AN=2;DP=107;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.09;SOR=1.056 GT:AD:DP:GQ:PL 1/1:0,107:107:99:3569,321,0 chr2 222297305 . T G 2289.77 PASS AC=2;AF=1.00;AN=2;DP=74;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.898 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2318,219,0 chr2 222306265 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 222437454 . G A 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 222437571 . A G 188.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.47;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,6:6:18:217,18,0 chr2 222438300 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 222452493 . G A 865.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.92;SOR=0.997 GT:AD:DP:GQ:PL 1/1:0,28:28:84:894,84,0 chr2 222487540 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 222487924 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 222487947 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 222515320 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 222558643 . A G 3415.77 PASS AC=2;AF=1.00;AN=2;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.49;SOR=1.212 GT:AD:DP:GQ:PL 1/1:0,102:102:99:3444,305,0 chr2 222571683 . C T 429.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.366;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.82;ReadPosRankSum=-0.329;SOR=0.627 GT:AD:DP:GQ:PL 0/1:15,14:29:99:458,0,493 chr2 222571709 . T C 554.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.597;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=10.311;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.53;ReadPosRankSum=-0.848;SOR=0.051 GT:AD:DP:GQ:PL 0/1:20,21:41:99:583,0,678 chr2 222571888 . C T 4921.77 PASS AC=2;AF=1.00;AN=2;DP=157;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.35;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,157:157:99:4950,469,0 chr2 222584786 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 222624260 . G A 314.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.694;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.99;ReadPosRankSum=1.987;SOR=0.602 GT:AD:DP:GQ:PL 0/1:11,10:21:99:343,0,362 chr2 222624574 . C T 438.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.281;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.88;ReadPosRankSum=-1.082;SOR=0.892 GT:AD:DP:GQ:PL 0/1:12,14:26:99:467,0,423 chr2 222628716 . G A 1513.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.223;ClippingRankSum=0.000;DP=106;ExcessHet=3.0103;FS=2.574;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.28;ReadPosRankSum=-1.073;SOR=0.889 GT:AD:DP:GQ:PL 0/1:41,65:106:99:1542,0,1020 chr2 222647032 . T C 952.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.057;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=1.799;MLEAC=1;MLEAF=0.500;MQ=59.84;MQRankSum=-1.076;QD=11.34;ReadPosRankSum=0.100;SOR=0.484 GT:AD:DP:GQ:PL 0/1:46,38:84:99:981,0,1247 chr2 222656186 . G C 2786.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.243;ClippingRankSum=0.000;DP=202;ExcessHet=3.0103;FS=1.261;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.80;ReadPosRankSum=1.065;SOR=0.570 GT:AD:DP:GQ:PL 0/1:106,96:202:99:2815,0,3149 chr2 222656259 . A G 1064.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.233;ClippingRankSum=0.000;DP=74;ExcessHet=3.0103;FS=1.278;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.39;ReadPosRankSum=-0.241;SOR=0.931 GT:AD:DP:GQ:PL 0/1:40,34:74:99:1093,0,1244 chr2 222726489 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=50.68;MQRankSum=-1.645;QD=9.35;ReadPosRankSum=0.000;SOR=2.245 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,109 chr2 222726497 . C G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=50.68;MQRankSum=-1.645;QD=9.35;ReadPosRankSum=1.036;SOR=2.245 GT:AD:DP:GQ:PL 0/1:3,2:5:75:75,0,109 chr2 222726524 . A G 91.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=44.00;MQRankSum=-1.645;QD=18.35;ReadPosRankSum=0.674;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:75:120,0,75 chr2 222726529 . C T 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.960;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.05;MQRankSum=-1.960;QD=14.79;ReadPosRankSum=1.440;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:117,0,117 chr2 222726531 . T C 88.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.960;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=47.05;MQRankSum=-1.960;QD=14.79;ReadPosRankSum=1.440;SOR=0.693 GT:AD:DP:GQ:PL 0/1:3,3:6:99:117,0,117 chr2 222726600 . G A 71.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.611;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=50.60;MQRankSum=-2.369;QD=8.97;ReadPosRankSum=-0.992;SOR=0.307 GT:AD:DP:GQ:PL 0/1:5,3:8:99:100,0,201 chr2 222726609 . A G 65.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.812;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=51.73;MQRankSum=-2.515;QD=7.31;ReadPosRankSum=-1.122;SOR=0.593 GT:AD:DP:GQ:PL 0/1:6,3:9:94:94,0,285 chr2 222756524 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 222756554 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 222787256 . G T 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 222916300 . T A 240.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.926;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.92;ReadPosRankSum=-1.809;SOR=0.976 GT:AD:DP:GQ:PL 0/1:15,12:27:99:269,0,452 chr2 222919350 . T G 144.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.549;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.06;ReadPosRankSum=-0.571;SOR=0.446 GT:AD:DP:GQ:PL 0/1:7,5:12:99:173,0,244 chr2 222920786 . T C 604.77 PASS AC=2;AF=1.00;AN=2;DP=19;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.83;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,19:19:57:633,57,0 chr2 222921128 . G A 438.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.792;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=7.681;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.25;ReadPosRankSum=1.586;SOR=2.170 GT:AD:DP:GQ:PL 0/1:25,14:39:99:467,0,847 chr2 222921545 . G A 102.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.56;ReadPosRankSum=0.574;SOR=0.269 GT:AD:DP:GQ:PL 0/1:8,4:12:99:131,0,295 chr2 222922841 . G A 911.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.839;ClippingRankSum=0.000;DP=69;ExcessHet=3.0103;FS=0.918;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.21;ReadPosRankSum=-0.211;SOR=0.546 GT:AD:DP:GQ:PL 0/1:35,34:69:99:940,0,914 chr2 222922973 . G A 456.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.966;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.75;ReadPosRankSum=-0.586;SOR=0.582 GT:AD:DP:GQ:PL 0/1:15,14:29:99:485,0,538 chr2 222924808 . G A 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.000;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 222928762 . C T 488.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.91;SOR=2.985 GT:AD:DP:GQ:PL 1/1:0,14:14:42:517,42,0 chr2 222931655 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.674;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 222933079 . G A 429.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.499;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.82;ReadPosRankSum=-1.301;SOR=0.627 GT:AD:DP:GQ:PL 0/1:15,14:29:99:458,0,477 chr2 222933423 . A C 63.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.660;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.80;ReadPosRankSum=-1.834;SOR=0.693 GT:AD:DP:GQ:PL 0/1:8,3:11:92:92,0,267 chr2 222934489 . C T 1216.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.83;SOR=2.899 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1245,102,0 chr2 222941256 . A G 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.812;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=-0.967;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:256,0,160 chr2 222941476 . C T 354.73 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.541;ClippingRankSum=0.000;DP=66;ExcessHet=3.0103;FS=2.258;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.91;ReadPosRankSum=0.662;SOR=0.446 GT:AD:DP:GQ:PL 0/1:38,22:60:99:392,0,1018 chr2 222978968 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 222997671 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 223052899 . C T 1931.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.966;ClippingRankSum=0.000;DP=163;ExcessHet=3.0103;FS=0.582;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.85;ReadPosRankSum=0.830;SOR=0.641 GT:AD:DP:GQ:PL 0/1:91,72:163:99:1960,0,2492 chr2 223052911 . C T 2483.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.905;ClippingRankSum=0.000;DP=176;ExcessHet=3.0103;FS=1.868;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.11;ReadPosRankSum=-0.466;SOR=0.846 GT:AD:DP:GQ:PL 0/1:81,95:176:99:2512,0,2174 chr2 223053094 . T C 4135.77 PASS AC=2;AF=1.00;AN=2;DP=117;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.54;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,117:117:99:4164,351,0 chr2 223053265 . T G 1747.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.900;ClippingRankSum=0.000;DP=135;ExcessHet=3.0103;FS=2.168;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.95;ReadPosRankSum=0.671;SOR=0.515 GT:AD:DP:GQ:PL 0/1:69,66:135:99:1776,0,1782 chr2 223053362 . C G 3533.77 PASS AC=2;AF=1.00;AN=2;DP=105;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.65;SOR=1.336 GT:AD:DP:GQ:PL 1/1:0,105:105:99:3562,315,0 chr2 223053645 . T C 137.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.26;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:165,12,0 chr2 223078018 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 223078019 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 223078032 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 223080077 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 223080091 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 223080108 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 223107005 . G A 54.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:82,6,0 chr2 223107409 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 223107410 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 223112325 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 223112349 . C T 42.74 PASS AC=2;AF=1.00;AN=2;DP=1;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.33;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,1:1:6:70,6,0 chr2 223114600 . G A 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 223151720 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 223166331 . A C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 223215473 . T C 80.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.76;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:108,9,0 chr2 223225651 . A G 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr2 223475281 . C G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 223476879 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 223496127 . T G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 223700827 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 223704951 . C T 1198.77 PASS AC=2;AF=1.00;AN=2;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.02;SOR=2.376 GT:AD:DP:GQ:PL 1/1:0,31:31:93:1227,93,0 chr2 223705182 . C T 2190.77 PASS AC=2;AF=1.00;AN=2;DP=67;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.70;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,67:67:99:2219,201,0 chr2 223705258 . A C 1263.77 PASS AC=2;AF=1.00;AN=2;DP=34;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.37;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,34:34:99:1292,102,0 chr2 223770046 . G A 308.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=23.75;ReadPosRankSum=1.361;SOR=1.609 GT:AD:DP:GQ:PL 0/1:4,9:13:99:337,0,127 chr2 223773250 . A G 743.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.103;ClippingRankSum=0.000;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.18;ReadPosRankSum=-0.222;SOR=0.615 GT:AD:DP:GQ:PL 0/1:49,32:81:99:772,0,1429 chr2 223773499 . G T 103.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.473;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.43;ReadPosRankSum=-0.406;SOR=0.330 GT:AD:DP:GQ:PL 0/1:7,4:11:99:132,0,245 chr2 223775662 . A G 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 223775780 . G A 751.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.455;ClippingRankSum=0.000;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.34;ReadPosRankSum=-0.376;SOR=0.833 GT:AD:DP:GQ:PL 0/1:20,29:49:99:780,0,514 chr2 223864957 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 223870769 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 223878656 . C T 5045.77 PASS AC=2;AF=1.00;AN=2;DP=155;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.76;SOR=1.564 GT:AD:DP:GQ:PL 1/1:0,154:154:99:5074,462,0 chr2 223878874 . C T 1671.77 PASS AC=2;AF=1.00;AN=2;DP=46;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.11;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,46:46:99:1700,138,0 chr2 223878935 . A G 860.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.44;SOR=4.003 GT:AD:DP:GQ:PL 1/1:0,23:23:69:889,69,0 chr2 223879984 . A G 2375.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.00;SOR=1.577 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2404,216,0 chr2 223894189 . C T 6311.77 PASS AC=2;AF=1.00;AN=2;DP=189;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.40;SOR=1.919 GT:AD:DP:GQ:PL 1/1:0,189:189:99:6340,568,0 chr2 223895777 . G A 2184.77 PASS AC=2;AF=1.00;AN=2;DP=63;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.68;SOR=1.685 GT:AD:DP:GQ:PL 1/1:0,63:63:99:2213,189,0 chr2 223895858 . A G 780.77 PASS AC=2;AF=1.00;AN=2;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.10;SOR=2.636 GT:AD:DP:GQ:PL 1/1:0,21:21:63:809,63,0 chr2 223897668 . A T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 223899099 . C T 2565.77 PASS AC=2;AF=1.00;AN=2;DP=81;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.68;SOR=1.668 GT:AD:DP:GQ:PL 1/1:0,81:81:99:2594,243,0 chr2 223901177 . G A 6463.77 PASS AC=2;AF=1.00;AN=2;DP=196;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.15;SOR=1.357 GT:AD:DP:GQ:PL 1/1:0,195:195:99:6492,585,0 chr2 223901533 . G C 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 223902254 . C T 108.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.78;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:137,15,0 chr2 223902357 . G A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 223902549 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 223903795 . A G 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 223905672 . G A 85.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:113,9,0 chr2 223906063 . C T 343.77 PASS AC=2;AF=1.00;AN=2;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.38;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,10:10:30:372,30,0 chr2 223911998 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 223912045 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 223912104 . T C 513.77 PASS AC=2;AF=1.00;AN=2;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.75;SOR=5.283 GT:AD:DP:GQ:PL 1/1:0,13:13:39:542,39,0 chr2 223912377 . T C 5748.77 PASS AC=2;AF=1.00;AN=2;DP=136;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.23;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,136:136:99:5777,409,0 chr2 223941695 . G A 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 223944251 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 223967174 . G A 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 223976196 . G A 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=0.366;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,183 chr2 223976236 . C T 46.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.59;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:75,0,33 chr2 223977433 . T C 549.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.614;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=3.144;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.66;ReadPosRankSum=-0.125;SOR=1.802 GT:AD:DP:GQ:PL 0/1:16,17:33:99:578,0,535 chr2 223978299 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 223980202 . C G 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.81;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 223982990 . T C 305.78 PASS AC=2;AF=1.00;AN=2;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.84;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,8:8:24:334,24,0 chr2 223989996 . G C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 223991933 . G A 3833.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.624;ClippingRankSum=0.000;DP=340;ExcessHet=3.0103;FS=0.823;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.28;ReadPosRankSum=-0.029;SOR=0.761 GT:AD:DP:GQ:PL 0/1:185,155:340:99:3862,0,4922 chr2 223992248 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 223997983 . C A 1451.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.153;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.844;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.12;ReadPosRankSum=-0.259;SOR=0.529 GT:AD:DP:GQ:PL 0/1:43,53:96:99:1480,0,1234 chr2 224001670 . G A 2893.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.027;ClippingRankSum=0.000;DP=218;ExcessHet=3.0103;FS=1.154;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.34;ReadPosRankSum=-0.521;SOR=0.807 GT:AD:DP:GQ:PL 0/1:111,106:217:99:2922,0,3098 chr2 224001859 . C A 3662.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.068;ClippingRankSum=0.000;DP=314;ExcessHet=3.0103;FS=0.901;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.70;ReadPosRankSum=-1.322;SOR=0.767 GT:AD:DP:GQ:PL 0/1:167,146:313:99:3691,0,4339 chr2 224024989 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 224025285 . C A 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 224261814 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 224433343 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 224433344 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 224485703 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 224503604 . A G 253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.454;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=2.282;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.707;SOR=0.223 GT:AD:DP:GQ:PL 0/1:9,11:20:99:282,0,282 chr2 224505837 . C A 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.11;ReadPosRankSum=0.484;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:134,0,104 chr2 224511315 . G C 336.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.787;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.906;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.47;ReadPosRankSum=0.036;SOR=1.473 GT:AD:DP:GQ:PL 0/1:13,12:25:99:365,0,332 chr2 224546712 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 224569728 . A G 358.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.119;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=4.869;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.29;ReadPosRankSum=-1.984;SOR=0.108 GT:AD:DP:GQ:PL 0/1:13,14:27:99:387,0,411 chr2 224569810 . G T 576.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.207;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=2.621;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.27;ReadPosRankSum=0.000;SOR=1.232 GT:AD:DP:GQ:PL 0/1:24,23:47:99:605,0,596 chr2 224655308 . A G 50.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:78,6,0 chr2 224662573 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 224765516 . C T 260.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.60;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:289,21,0 chr2 224765718 . C T 1510.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.799;ClippingRankSum=0.000;DP=162;ExcessHet=3.0103;FS=2.067;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.33;ReadPosRankSum=0.065;SOR=0.904 GT:AD:DP:GQ:PL 0/1:101,61:162:99:1539,0,2751 chr2 224769095 . T C 207.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.081;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.66;ReadPosRankSum=0.892;SOR=0.648 GT:AD:DP:GQ:PL 0/1:15,9:24:99:236,0,383 chr2 224769976 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 224781118 . T A 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 224784703 . T A 1266.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.231;ClippingRankSum=0.000;DP=136;ExcessHet=3.0103;FS=2.251;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.31;ReadPosRankSum=0.443;SOR=0.482 GT:AD:DP:GQ:PL 0/1:81,55:136:99:1295,0,2290 chr2 224800357 . G A 758.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.04;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,20:20:60:787,60,0 chr2 224805279 . A G 1634.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.355;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=3.347;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.29;ReadPosRankSum=-0.236;SOR=0.436 GT:AD:DP:GQ:PL 0/1:61,62:123:99:1663,0,1667 chr2 224805639 . G A 108.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.88;ReadPosRankSum=0.084;SOR=0.412 GT:AD:DP:GQ:PL 0/1:6,4:10:99:137,0,220 chr2 224806184 . G C 819.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.452;ClippingRankSum=0.000;DP=70;ExcessHet=3.0103;FS=3.321;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.71;ReadPosRankSum=0.644;SOR=1.189 GT:AD:DP:GQ:PL 0/1:39,31:70:99:848,0,1010 chr2 224814314 . A C 518.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.503;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=1.459;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=0.644;SOR=0.412 GT:AD:DP:GQ:PL 0/1:16,18:34:99:547,0,498 chr2 224819449 . A G 1418.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.195;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=0.717;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.26;ReadPosRankSum=0.144;SOR=0.781 GT:AD:DP:GQ:PL 0/1:50,57:107:99:1447,0,1241 chr2 224819564 . T A 1143.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.233;ClippingRankSum=0.000;DP=55;ExcessHet=3.0103;FS=4.256;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.80;ReadPosRankSum=-0.126;SOR=1.461 GT:AD:DP:GQ:PL 0/1:28,27:55:99:1172,0,1814 chr2 224823344 . T G 1944.77 PASS AC=2;AF=1.00;AN=2;DP=50;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.74;SOR=4.977 GT:AD:DP:GQ:PL 1/1:0,50:50:99:1973,150,0 chr2 224909116 . A G 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 224916952 . G A 1040.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.72;SOR=2.925 GT:AD:DP:GQ:PL 1/1:0,24:24:72:1069,72,0 chr2 224916953 . T C 1040.77 PASS AC=2;AF=1.00;AN=2;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.88;SOR=2.925 GT:AD:DP:GQ:PL 1/1:0,24:24:72:1069,72,0 chr2 224931395 . G A 396.77 PASS AC=2;AF=1.00;AN=2;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.43;SOR=3.442 GT:AD:DP:GQ:PL 1/1:0,11:11:33:425,33,0 chr2 224940208 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 224946864 . T A 547.77 PASS AC=2;AF=1.00;AN=2;DP=16;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.24;SOR=2.584 GT:AD:DP:GQ:PL 1/1:0,16:16:48:576,48,0 chr2 224983673 . T A 111.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=0.060;SOR=0.527 GT:AD:DP:GQ:PL 0/1:5,4:9:99:140,0,182 chr2 224983862 . T C 2923.77 PASS AC=2;AF=1.00;AN=2;DP=91;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.13;SOR=1.191 GT:AD:DP:GQ:PL 1/1:0,91:91:99:2952,272,0 chr2 225010441 . A C 305.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.84;ReadPosRankSum=1.189;SOR=1.329 GT:AD:DP:GQ:PL 0/1:5,9:14:99:334,0,167 chr2 225136158 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 225136159 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 225136178 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 225136184 . T A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 225408774 . T C 806.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.74;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:835,60,0 chr2 225408973 . T C 3599.77 PASS AC=2;AF=1.00;AN=2;DP=114;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.58;SOR=0.922 GT:AD:DP:GQ:PL 1/1:0,114:114:99:3628,342,0 chr2 225432814 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 225583019 . C T 4921.77 PASS AC=2;AF=1.00;AN=2;DP=147;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.48;SOR=1.901 GT:AD:DP:GQ:PL 1/1:0,147:147:99:4950,440,0 chr2 225583128 . G A 1509.77 PASS AC=2;AF=1.00;AN=2;BaseQRankSum=-0.423;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;MQRankSum=0.000;QD=32.64;ReadPosRankSum=-0.640;SOR=3.209 GT:AD:DP:GQ:PL 1/1:1,41:42:85:1538,85,0 chr2 225595105 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 225595106 . C G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 225627054 . A C 4598.77 PASS AC=2;AF=1.00;AN=2;DP=149;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.86;SOR=1.194 GT:AD:DP:GQ:PL 1/1:0,149:149:99:4627,447,0 chr2 225651630 . T C 1613.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.703;ClippingRankSum=0.000;DP=102;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.82;ReadPosRankSum=0.520;SOR=0.781 GT:AD:DP:GQ:PL 0/1:48,54:102:99:1642,0,1282 chr2 225651713 . A G 503.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.322;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=1.535;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.92;ReadPosRankSum=1.340;SOR=1.096 GT:AD:DP:GQ:PL 0/1:21,18:39:99:532,0,600 chr2 225674642 . G C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 225782802 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 225782803 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 225782811 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 225783496 . T C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 226031347 . C T 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 226127310 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 226240975 . C G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 226392496 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 226462052 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 226462055 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 226481759 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 226481760 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 226648016 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 226648242 . A C 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 226794867 . G C 220.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.118;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=0.425;SOR=0.582 GT:AD:DP:GQ:PL 0/1:9,8:17:99:249,0,291 chr2 226796327 . T C 1721.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.684;ClippingRankSum=0.000;DP=138;ExcessHet=3.0103;FS=1.334;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.48;ReadPosRankSum=1.363;SOR=0.822 GT:AD:DP:GQ:PL 0/1:71,67:138:99:1750,0,1957 chr2 226797299 . G A 4341.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.568;ClippingRankSum=0.000;DP=303;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.38;ReadPosRankSum=0.628;SOR=0.711 GT:AD:DP:GQ:PL 0/1:139,163:302:99:4370,0,3878 chr2 226906673 . T G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=0.000;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 226908750 . T C 1082.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.134;ClippingRankSum=0.000;DP=78;ExcessHet=3.0103;FS=0.936;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.88;ReadPosRankSum=-0.878;SOR=0.931 GT:AD:DP:GQ:PL 0/1:36,42:78:99:1111,0,929 chr2 226914475 . C A 1404.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.680;ClippingRankSum=0.000;DP=118;ExcessHet=3.0103;FS=1.478;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.90;ReadPosRankSum=0.347;SOR=0.597 GT:AD:DP:GQ:PL 0/1:65,53:118:99:1433,0,1654 chr2 226942486 . G T 368.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.032;ClippingRankSum=0.000;DP=26;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.18;ReadPosRankSum=1.444;SOR=1.136 GT:AD:DP:GQ:PL 0/1:13,13:26:99:397,0,397 chr2 227055758 . G A 462.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=31;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.93;ReadPosRankSum=-1.151;SOR=1.414 GT:AD:DP:GQ:PL 0/1:17,14:31:99:491,0,613 chr2 227057210 . G A 33.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.82;ReadPosRankSum=0.366;SOR=0.223 GT:AD:DP:GQ:PL 0/1:5,2:7:62:62,0,188 chr2 227057225 . G A 30.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=3.85;ReadPosRankSum=0.619;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,2:8:59:59,0,227 chr2 227057261 . A G 204.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.130;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=1.721;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.19;ReadPosRankSum=-0.992;SOR=0.374 GT:AD:DP:GQ:PL 0/1:16,9:25:99:233,0,459 chr2 227057299 . A G 417.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.622;ClippingRankSum=0.000;DP=40;ExcessHet=3.0103;FS=1.370;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.44;ReadPosRankSum=0.386;SOR=1.063 GT:AD:DP:GQ:PL 0/1:24,16:40:99:446,0,612 chr2 227057388 . T C 1620.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.058;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=4.963;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.20;ReadPosRankSum=-0.863;SOR=1.408 GT:AD:DP:GQ:PL 0/1:31,42:73:99:1649,0,1982 chr2 227057393 . T A 1602.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.235;ClippingRankSum=0.000;DP=75;ExcessHet=3.0103;FS=8.182;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.37;ReadPosRankSum=-0.235;SOR=1.616 GT:AD:DP:GQ:PL 0/1:33,42:75:99:1631,0,1985 chr2 227057738 . G A 694.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.198;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.71;ReadPosRankSum=0.333;SOR=0.693 GT:AD:DP:GQ:PL 0/1:10,22:32:99:723,0,288 chr2 227057754 . T C 533.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.342;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.24;ReadPosRankSum=-1.268;SOR=0.941 GT:AD:DP:GQ:PL 0/1:8,16:24:99:562,0,216 chr2 227060381 . C T 138.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.91;ReadPosRankSum=0.132;SOR=0.307 GT:AD:DP:GQ:PL 0/1:9,5:14:99:167,0,333 chr2 227062820 . C T 42.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.69;ReadPosRankSum=-0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:71,0,72 chr2 227078235 . T C 204.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.324;ClippingRankSum=0.000;DP=21;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.75;ReadPosRankSum=-1.770;SOR=0.693 GT:AD:DP:GQ:PL 0/1:13,8:21:99:233,0,412 chr2 227089711 . G A 206.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.860;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.78;ReadPosRankSum=-0.135;SOR=1.609 GT:AD:DP:GQ:PL 0/1:8,7:15:99:235,0,255 chr2 227089883 . G A 1082.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.662;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=5.833;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.71;ReadPosRankSum=2.093;SOR=0.820 GT:AD:DP:GQ:PL 0/1:35,44:79:99:1111,0,883 chr2 227099193 . C A 45.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.26;ReadPosRankSum=-0.431;SOR=1.179 GT:AD:DP:GQ:PL 0/1:1,2:3:33:74,0,33 chr2 227102549 . G C 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=-0.319;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 227102614 . C G 270.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.849;ClippingRankSum=0.000;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.34;ReadPosRankSum=-0.229;SOR=0.446 GT:AD:DP:GQ:PL 0/1:5,9:14:99:299,0,167 chr2 227103837 . A C 564.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.336;ClippingRankSum=0.000;DP=44;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=-0.516;SOR=0.813 GT:AD:DP:GQ:PL 0/1:25,19:44:99:593,0,742 chr2 227108379 . A T 582.77 PASS AC=2;AF=1.00;AN=2;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.35;SOR=5.549 GT:AD:DP:GQ:PL 1/1:0,15:15:45:611,45,0 chr2 227108477 . G A 813.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.515;ClippingRankSum=0.000;DP=79;ExcessHet=3.0103;FS=0.926;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.30;ReadPosRankSum=-0.149;SOR=0.502 GT:AD:DP:GQ:PL 0/1:44,35:79:99:842,0,1180 chr2 227108694 . C A 415.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.518;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=3.304;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.99;ReadPosRankSum=-0.396;SOR=1.352 GT:AD:DP:GQ:PL 0/1:19,13:32:99:444,0,650 chr2 227108907 . A G 2430.77 PASS AC=2;AF=1.00;AN=2;DP=72;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.76;SOR=1.483 GT:AD:DP:GQ:PL 1/1:0,72:72:99:2459,216,0 chr2 227109157 . T C 2192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.633;ClippingRankSum=0.000;DP=125;ExcessHet=3.0103;FS=0.671;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.54;ReadPosRankSum=-1.289;SOR=0.821 GT:AD:DP:GQ:PL 0/1:66,59:125:99:2221,0,3997 chr2 227109162 . C T 2101.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.672;ClippingRankSum=0.000;DP=121;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.37;ReadPosRankSum=-0.934;SOR=0.695 GT:AD:DP:GQ:PL 0/1:64,57:121:99:2130,0,3987 chr2 227109176 . T C 1309.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.627;ClippingRankSum=0.000;DP=115;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.49;ReadPosRankSum=0.937;SOR=0.677 GT:AD:DP:GQ:PL 0/1:62,52:114:99:1338,0,1815 chr2 227109397 . A G 1242.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.87;SOR=1.552 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1271,117,0 chr2 227109475 . A G 608.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.82;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,18:18:54:637,54,0 chr2 227109477 . G A 92.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.721;ClippingRankSum=0.000;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=5.15;ReadPosRankSum=-1.010;SOR=0.602 GT:AD:DP:GQ:PL 0/1:13,5:18:99:121,0,358 chr2 227111397 . G A 133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.29;ReadPosRankSum=0.524;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:99:162,0,149 chr2 227111402 . C A 133.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.431;ClippingRankSum=0.000;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.29;ReadPosRankSum=0.000;SOR=1.329 GT:AD:DP:GQ:PL 0/1:2,4:6:99:162,0,149 chr2 227111510 . T C 816.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.043;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=27.23;ReadPosRankSum=-1.046;SOR=1.022 GT:AD:DP:GQ:PL 0/1:10,20:30:99:845,0,559 chr2 227111514 . C A 849.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.444;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.563;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.28;ReadPosRankSum=-0.363;SOR=1.179 GT:AD:DP:GQ:PL 0/1:13,22:35:99:878,0,617 chr2 227138479 . A G 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 227147719 . T C 227.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.98;ReadPosRankSum=-0.305;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:256,0,173 chr2 227175101 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 227175103 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 227175132 . G A 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 227238036 . C A 1314.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.276;ClippingRankSum=0.000;DP=103;ExcessHet=3.0103;FS=0.778;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.89;ReadPosRankSum=-0.785;SOR=0.542 GT:AD:DP:GQ:PL 0/1:51,51:102:99:1343,0,1359 chr2 227240044 . C T 2204.77 PASS AC=2;AF=1.00;AN=2;DP=66;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.41;SOR=1.196 GT:AD:DP:GQ:PL 1/1:0,66:66:99:2233,198,0 chr2 227244631 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 227245068 . C T 1159.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.14;SOR=2.368 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1188,105,0 chr2 227246719 . T C 2969.77 PASS AC=2;AF=1.00;AN=2;DP=93;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.93;SOR=0.804 GT:AD:DP:GQ:PL 1/1:0,93:93:99:2998,279,0 chr2 227246884 . G T 1426.77 PASS AC=2;AF=1.00;AN=2;DP=33;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.24;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,33:33:99:1455,99,0 chr2 227246888 . G T 1408.77 PASS AC=2;AF=1.00;AN=2;DP=32;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.22;SOR=4.047 GT:AD:DP:GQ:PL 1/1:0,32:32:96:1437,96,0 chr2 227246935 . A G 554.77 PASS AC=2;AF=1.00;AN=2;DP=14;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.45;SOR=5.421 GT:AD:DP:GQ:PL 1/1:0,14:14:42:583,42,0 chr2 227247163 . C G 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.981 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 227247470 . A G 7486.77 PASS AC=2;AF=1.00;AN=2;DP=243;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.07;SOR=0.701 GT:AD:DP:GQ:PL 1/1:0,241:241:99:7515,721,0 chr2 227247723 . C T 240.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.04;ReadPosRankSum=1.418;SOR=0.392 GT:AD:DP:GQ:PL 0/1:12,8:20:99:269,0,441 chr2 227248459 . A G 1854.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.41;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1883,183,0 chr2 227248706 . C A 90.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.566;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.35;ReadPosRankSum=1.068;SOR=1.981 GT:AD:DP:GQ:PL 0/1:4,4:8:99:119,0,109 chr2 227251602 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 227253687 . T G 1947.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.42;SOR=1.647 GT:AD:DP:GQ:PL 1/1:0,62:62:99:1976,186,0 chr2 227253880 . A G 246.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.50;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:275,21,0 chr2 227254745 . G A 4090.77 PASS AC=2;AF=1.00;AN=2;DP=126;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.47;SOR=0.937 GT:AD:DP:GQ:PL 1/1:0,126:126:99:4119,377,0 chr2 227255715 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 227259986 . A G 1147.77 PASS AC=2;AF=1.00;AN=2;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.48;SOR=0.906 GT:AD:DP:GQ:PL 1/1:0,29:29:87:1176,87,0 chr2 227263824 . C T 4783.77 PASS AC=2;AF=1.00;AN=2;DP=151;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.68;SOR=1.386 GT:AD:DP:GQ:PL 1/1:0,151:151:99:4812,449,0 chr2 227263852 . G A 2858.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.294;ClippingRankSum=0.000;DP=187;ExcessHet=3.0103;FS=1.157;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.29;ReadPosRankSum=-1.245;SOR=0.595 GT:AD:DP:GQ:PL 0/1:78,109:187:99:2887,0,1935 chr2 227264149 . C T 72.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.319;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.19;ReadPosRankSum=1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:29:101,0,29 chr2 227266453 . A G 1871.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.406;ClippingRankSum=0.000;DP=160;ExcessHet=3.0103;FS=3.664;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.70;ReadPosRankSum=-0.653;SOR=0.471 GT:AD:DP:GQ:PL 0/1:79,81:160:99:1900,0,1987 chr2 227267036 . G A 1137.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.082;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=1.764;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.39;ReadPosRankSum=-0.263;SOR=0.941 GT:AD:DP:GQ:PL 0/1:42,43:85:99:1166,0,1201 chr2 227267196 . C A 673.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.992;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.343;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.43;ReadPosRankSum=-0.798;SOR=1.071 GT:AD:DP:GQ:PL 0/1:18,23:41:99:702,0,448 chr2 227270915 . C T 1094.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.417;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.95;ReadPosRankSum=0.897;SOR=0.632 GT:AD:DP:GQ:PL 0/1:57,43:100:99:1123,0,1633 chr2 227272827 . A C 496.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.583;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.19;ReadPosRankSum=-0.421;SOR=0.634 GT:AD:DP:GQ:PL 0/1:18,17:35:99:525,0,588 chr2 227279990 . G T 962.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.784;ClippingRankSum=0.000;DP=84;ExcessHet=3.0103;FS=3.298;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.46;ReadPosRankSum=0.313;SOR=1.106 GT:AD:DP:GQ:PL 0/1:49,35:84:99:991,0,1317 chr2 227280827 . C T 1406.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.507;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=1.682;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.35;ReadPosRankSum=-0.410;SOR=0.899 GT:AD:DP:GQ:PL 0/1:46,52:98:99:1435,0,1354 chr2 227284391 . A G 343.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.051;ClippingRankSum=0.000;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.81;ReadPosRankSum=0.775;SOR=0.793 GT:AD:DP:GQ:PL 0/1:25,14:39:99:372,0,685 chr2 227289379 . C T 208.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.956;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.28;ReadPosRankSum=-2.400;SOR=0.425 GT:AD:DP:GQ:PL 0/1:10,7:17:99:237,0,335 chr2 227293702 . T C 2803.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.012;ClippingRankSum=0.000;DP=226;ExcessHet=3.0103;FS=3.130;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.57;ReadPosRankSum=0.786;SOR=0.494 GT:AD:DP:GQ:PL 0/1:110,113:223:99:2832,0,2851 chr2 227293932 . G C 1371.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.49;ReadPosRankSum=-0.282;SOR=0.487 GT:AD:DP:GQ:PL 0/1:23,38:61:99:1400,0,775 chr2 227294347 . T C 1300.77 PASS AC=2;AF=1.00;AN=2;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.25;SOR=1.455 GT:AD:DP:GQ:PL 1/1:0,43:43:99:1329,129,0 chr2 227297564 . T G 113.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.25;ReadPosRankSum=0.842;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:142,0,100 chr2 227329854 . G A 4083.77 PASS AC=2;AF=1.00;AN=2;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.20;SOR=0.885 GT:AD:DP:GQ:PL 1/1:0,123:123:99:4112,369,0 chr2 227332522 . G A 341.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.025;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=8.049;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.76;ReadPosRankSum=0.926;SOR=0.916 GT:AD:DP:GQ:PL 0/1:22,13:35:99:370,0,631 chr2 227332652 . A G 784.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.86;SOR=2.737 GT:AD:DP:GQ:PL 1/1:0,22:22:66:813,66,0 chr2 227332772 . A G 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 227340213 . C T 814.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.18;SOR=1.781 GT:AD:DP:GQ:PL 1/1:0,27:27:81:843,81,0 chr2 227340266 . C T 1092.77 PASS AC=2;AF=1.00;AN=2;DP=35;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.22;SOR=1.675 GT:AD:DP:GQ:PL 1/1:0,35:35:99:1121,105,0 chr2 227342909 . G A 936.77 PASS AC=2;AF=1.00;AN=2;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.46;SOR=2.468 GT:AD:DP:GQ:PL 1/1:0,28:28:84:965,84,0 chr2 227355812 . T C 256.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.327;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=6.410;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.12;ReadPosRankSum=-0.524;SOR=0.061 GT:AD:DP:GQ:PL 0/1:6,9:15:99:285,0,205 chr2 227398378 . G T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 227398389 . G A 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 227400720 . T C 42.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:70,6,0 chr2 227403332 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 227403344 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 227403369 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 227439773 . A G 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 227456304 . C A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 227456582 . T C 146.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.38;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:175,15,0 chr2 227491346 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 227534764 . T C 3024.77 PASS AC=2;AF=1.00;AN=2;DP=94;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.18;SOR=1.686 GT:AD:DP:GQ:PL 1/1:0,94:94:99:3053,281,0 chr2 227551782 . C T 180.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.24;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:209,15,0 chr2 227551996 . A G 4355.77 PASS AC=2;AF=1.00;AN=2;DP=138;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.56;SOR=1.445 GT:AD:DP:GQ:PL 1/1:0,138:138:99:4384,414,0 chr2 227554241 . A G 127.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:155,12,0 chr2 227610836 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 227610983 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 227611168 . C T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 227611424 . C T 4348.77 PASS AC=2;AF=1.00;AN=2;DP=133;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.70;SOR=0.802 GT:AD:DP:GQ:PL 1/1:0,133:133:99:4377,399,0 chr2 227611537 . C G 3564.77 PASS AC=2;AF=1.00;AN=2;DP=111;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.12;SOR=1.138 GT:AD:DP:GQ:PL 1/1:0,111:111:99:3593,333,0 chr2 227611853 . G C 246.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.573;ClippingRankSum=0.000;DP=30;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.23;ReadPosRankSum=-1.464;SOR=0.582 GT:AD:DP:GQ:PL 0/1:18,12:30:99:275,0,491 chr2 227611911 . G A 57.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.944;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=4.44;ReadPosRankSum=-0.771;SOR=0.495 GT:AD:DP:GQ:PL 0/1:10,3:13:86:86,0,344 chr2 227628248 . A C 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.566;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.11;ReadPosRankSum=1.718;SOR=0.941 GT:AD:DP:GQ:PL 0/1:3,4:7:99:134,0,104 chr2 227628495 . G A 3662.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.302;ClippingRankSum=0.000;DP=323;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.34;ReadPosRankSum=-0.082;SOR=0.687 GT:AD:DP:GQ:PL 0/1:174,149:323:99:3691,0,4440 chr2 227632753 . T A 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:72,0,71 chr2 227648465 . G A 535.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.802;ClippingRankSum=0.000;DP=50;ExcessHet=3.0103;FS=2.465;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.72;ReadPosRankSum=0.339;SOR=0.384 GT:AD:DP:GQ:PL 0/1:28,22:50:99:564,0,814 chr2 227648501 . C T 407.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.179;ClippingRankSum=0.000;DP=37;ExcessHet=3.0103;FS=3.231;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.02;ReadPosRankSum=-0.324;SOR=0.268 GT:AD:DP:GQ:PL 0/1:21,16:37:99:436,0,624 chr2 227650352 . C T 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.524;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.842;SOR=1.179 GT:AD:DP:GQ:PL 0/1:2,3:5:34:76,0,34 chr2 227663679 . T C 112.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.58;SOR=1.022 GT:AD:DP:GQ:PL 1/1:0,5:5:15:141,15,0 chr2 227698523 . C T 210.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.46;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,6:6:18:239,18,0 chr2 227699875 . A T 139.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.76;SOR=3.258 GT:AD:DP:GQ:PL 1/1:0,4:4:12:167,12,0 chr2 227700940 . G A 1578.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.161;ClippingRankSum=0.000;DP=123;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.84;ReadPosRankSum=0.551;SOR=0.752 GT:AD:DP:GQ:PL 0/1:62,61:123:99:1607,0,1766 chr2 227702382 . C T 584.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.310;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.16;ReadPosRankSum=0.142;SOR=0.452 GT:AD:DP:GQ:PL 0/1:9,20:29:99:613,0,243 chr2 227728450 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.67;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 227743467 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 227743475 . A C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 227746113 . T C 103.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=54.16;QD=34.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:131,9,0 chr2 227746121 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 227752793 . G T 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 227752861 . T C 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 227752906 . G A 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 227753465 . G T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 227753536 . T C 87.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:115,9,0 chr2 227758980 . C T 153.84 PASS AC=2;AF=1.00;AN=2;DP=6;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=25.64;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,6:6:18:182,18,0 chr2 227759092 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 227858514 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 227870120 . T A 983.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.297;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=3.326;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.94;ReadPosRankSum=-1.058;SOR=0.381 GT:AD:DP:GQ:PL 0/1:37,39:76:99:1012,0,953 chr2 227870240 . G A 948.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.310;ClippingRankSum=0.000;DP=76;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.48;ReadPosRankSum=0.648;SOR=0.664 GT:AD:DP:GQ:PL 0/1:37,39:76:99:977,0,940 chr2 227870314 . G C 383.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.339;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.35;ReadPosRankSum=-0.186;SOR=0.960 GT:AD:DP:GQ:PL 0/1:14,11:25:99:412,0,914 chr2 227870318 . A G 349.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.283;ClippingRankSum=0.000;DP=24;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.57;ReadPosRankSum=0.593;SOR=0.846 GT:AD:DP:GQ:PL 0/1:14,10:24:99:378,0,917 chr2 227870319 . C T 349.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.530;ClippingRankSum=0.000;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.21;ReadPosRankSum=0.266;SOR=0.941 GT:AD:DP:GQ:PL 0/1:13,10:23:99:378,0,917 chr2 227870424 . T C 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=0.674;SOR=0.859 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr2 227870470 . T C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.319;SOR=0.446 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 227871597 . G T 993.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.672;ClippingRankSum=0.000;DP=80;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-1.458;SOR=0.767 GT:AD:DP:GQ:PL 0/1:44,36:80:99:1022,0,1297 chr2 227871811 . A G 1863.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.218;ClippingRankSum=0.000;DP=133;ExcessHet=3.0103;FS=0.702;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.01;ReadPosRankSum=0.861;SOR=0.792 GT:AD:DP:GQ:PL 0/1:61,72:133:99:1892,0,1555 chr2 227871892 . C T 812.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.562;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.922;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=18.06;ReadPosRankSum=0.377;SOR=1.426 GT:AD:DP:GQ:PL 0/1:20,25:45:99:841,0,662 chr2 227876186 . A T 230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.602;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=4.393;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.98;ReadPosRankSum=1.814;SOR=2.833 GT:AD:DP:GQ:PL 0/1:4,7:11:99:259,0,100 chr2 227876211 . G A 268.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.411;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.92;ReadPosRankSum=0.114;SOR=1.179 GT:AD:DP:GQ:PL 0/1:6,9:15:99:297,0,171 chr2 227876534 . T A 625.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.481;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=1.998;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.88;ReadPosRankSum=-0.807;SOR=1.568 GT:AD:DP:GQ:PL 0/1:15,20:35:99:654,0,447 chr2 227885523 . G T 867.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.749;ClippingRankSum=0.000;DP=77;ExcessHet=3.0103;FS=3.738;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.27;ReadPosRankSum=-1.368;SOR=1.302 GT:AD:DP:GQ:PL 0/1:45,32:77:99:896,0,1201 chr2 227893740 . C A 1463.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.452;ClippingRankSum=0.000;DP=100;ExcessHet=3.0103;FS=2.902;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.64;ReadPosRankSum=0.166;SOR=1.101 GT:AD:DP:GQ:PL 0/1:47,53:100:99:1492,0,1174 chr2 227902902 . T C 1087.77 PASS AC=2;AF=1.00;AN=2;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.03;SOR=6.666 GT:AD:DP:GQ:PL 1/1:0,27:27:81:1116,81,0 chr2 227912222 . A G 181.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.98;ReadPosRankSum=-0.992;SOR=0.569 GT:AD:DP:GQ:PL 0/1:7,6:13:99:210,0,252 chr2 227918648 . A C 185.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.48;ReadPosRankSum=-0.987;SOR=0.169 GT:AD:DP:GQ:PL 0/1:6,6:12:99:214,0,214 chr2 227945778 . T C 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 228018313 . A C 5454.77 PASS AC=2;AF=1.00;AN=2;DP=158;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.74;SOR=0.813 GT:AD:DP:GQ:PL 1/1:0,157:157:99:5483,471,0 chr2 228019005 . T C 6594.77 PASS AC=2;AF=1.00;AN=2;DP=185;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.54;SOR=1.355 GT:AD:DP:GQ:PL 1/1:0,184:184:99:6623,553,0 chr2 228030076 . C G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 228030109 . A T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 228030192 . T G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 228030438 . T C 59.74 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.87;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:87,6,0 chr2 228061182 . A G 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 228064500 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 228108667 . A C 168.90 PASS AC=2;AF=1.00;AN=2;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.78;SOR=3.611 GT:AD:DP:GQ:PL 1/1:0,5:5:15:197,15,0 chr2 228108944 . A G 1356.77 PASS AC=2;AF=1.00;AN=2;DP=40;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.92;SOR=2.191 GT:AD:DP:GQ:PL 1/1:0,40:40:99:1385,120,0 chr2 228128047 . G A 639.77 PASS AC=2;AF=1.00;AN=2;DP=18;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.29;SOR=3.500 GT:AD:DP:GQ:PL 1/1:0,18:18:54:668,54,0 chr2 228128134 . T C 1632.77 PASS AC=2;AF=1.00;AN=2;DP=52;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.40;SOR=0.941 GT:AD:DP:GQ:PL 1/1:0,52:52:99:1661,156,0 chr2 228128633 . G T 44.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=22.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:72,6,0 chr2 228131754 . A G 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 228131921 . G A 1753.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.09;SOR=2.259 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1782,159,0 chr2 228131934 . A G 1946.77 PASS AC=2;AF=1.00;AN=2;DP=61;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.91;SOR=2.119 GT:AD:DP:GQ:PL 1/1:0,61:61:99:1975,183,0 chr2 228131956 . G A 2270.77 PASS AC=2;AF=1.00;AN=2;DP=73;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.11;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,73:73:99:2299,219,0 chr2 228132279 . C T 1711.77 PASS AC=2;AF=1.00;AN=2;DP=55;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.12;SOR=1.061 GT:AD:DP:GQ:PL 1/1:0,55:55:99:1740,165,0 chr2 228132293 . C T 1601.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.22;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1630,159,0 chr2 228170635 . T G 632.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.395;ClippingRankSum=0.000;DP=71;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.91;ReadPosRankSum=-1.316;SOR=0.789 GT:AD:DP:GQ:PL 0/1:43,28:71:99:661,0,1127 chr2 228170711 . T C 486.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.114;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.47;ReadPosRankSum=0.821;SOR=1.426 GT:AD:DP:GQ:PL 0/1:9,16:25:99:515,0,267 chr2 228252032 . C T 51.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:79,9,0 chr2 228327822 . A G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 228353189 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 228597834 . G T 55.79 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.282;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.16;ReadPosRankSum=1.282;SOR=0.223 GT:AD:DP:GQ:PL 0/1:1,4:5:23:84,0,23 chr2 228651551 . G A 37.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.834;ClippingRankSum=0.000;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=6.29;ReadPosRankSum=0.524;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,4:6:66:66,0,66 chr2 228672514 . T C 71.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=17.76;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,4:4:12:99,12,0 chr2 228852969 . G T 675.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.72;SOR=1.329 GT:AD:DP:GQ:PL 1/1:0,22:22:66:704,66,0 chr2 229029166 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 229079989 . G A 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 229134544 . T C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 229164104 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 229228007 . G A 1490.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.055;ClippingRankSum=0.000;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.69;ReadPosRankSum=-0.517;SOR=0.732 GT:AD:DP:GQ:PL 0/1:38,57:95:99:1519,0,986 chr2 229232121 . C T 1542.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.564;ClippingRankSum=0.000;DP=96;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.07;ReadPosRankSum=-0.969;SOR=0.779 GT:AD:DP:GQ:PL 0/1:44,52:96:99:1571,0,1346 chr2 229232177 . A T 549.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.440;ClippingRankSum=0.000;DP=35;ExcessHet=3.0103;FS=6.410;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.71;ReadPosRankSum=-1.345;SOR=0.048 GT:AD:DP:GQ:PL 0/1:17,18:35:99:578,0,593 chr2 229270811 . C T 2859.77 PASS AC=2;AF=1.00;AN=2;DP=88;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.50;SOR=1.775 GT:AD:DP:GQ:PL 1/1:0,88:88:99:2888,264,0 chr2 229350786 . C T 63.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=21.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:91,9,0 chr2 229367173 . A T 2104.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.051;ClippingRankSum=0.000;DP=175;ExcessHet=3.0103;FS=2.133;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.03;ReadPosRankSum=0.208;SOR=0.515 GT:AD:DP:GQ:PL 0/1:99,76:175:99:2133,0,2792 chr2 229367375 . T C 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.674;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:71:72,0,71 chr2 229405274 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 229405279 . T C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 229447783 . T C 359.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.906;ClippingRankSum=0.000;DP=34;ExcessHet=3.0103;FS=1.725;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.58;ReadPosRankSum=0.474;SOR=0.277 GT:AD:DP:GQ:PL 0/1:19,15:34:99:388,0,622 chr2 229453697 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 229553710 . T G 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 229585661 . A C 55.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.87;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:83,6,0 chr2 229598213 . A G 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.27;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 229598216 . G C 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.27;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 229620734 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 229714300 . G A 105.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.616;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=2.632;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.62;ReadPosRankSum=0.998;SOR=1.535 GT:AD:DP:GQ:PL 0/1:7,4:11:99:134,0,185 chr2 229767552 . G A 1430.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.057;ClippingRankSum=0.000;DP=98;ExcessHet=3.0103;FS=4.283;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.06;ReadPosRankSum=0.204;SOR=0.370 GT:AD:DP:GQ:PL 0/1:41,54:95:99:1459,0,1188 chr2 229791017 . C T 704.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.63;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,20:20:60:733,60,0 chr2 229802182 . A G 322.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.211;ClippingRankSum=0.000;DP=25;ExcessHet=3.0103;FS=10.193;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.91;ReadPosRankSum=1.850;SOR=0.023 GT:AD:DP:GQ:PL 0/1:12,13:25:99:351,0,415 chr2 229804142 . T C 1418.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.218;ClippingRankSum=0.000;DP=122;ExcessHet=3.0103;FS=2.314;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.63;ReadPosRankSum=-1.257;SOR=0.601 GT:AD:DP:GQ:PL 0/1:62,60:122:99:1447,0,1617 chr2 229804252 . G A 1888.77 PASS AC=2;AF=1.00;AN=2;DP=64;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.51;SOR=1.214 GT:AD:DP:GQ:PL 1/1:0,64:64:99:1917,191,0 chr2 229804266 . T G 707.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.273;ClippingRankSum=0.000;DP=57;ExcessHet=3.0103;FS=2.392;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.42;ReadPosRankSum=-1.580;SOR=1.154 GT:AD:DP:GQ:PL 0/1:29,28:57:99:736,0,699 chr2 229836785 . C A 1230.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.972;ClippingRankSum=0.000;DP=88;ExcessHet=3.0103;FS=7.983;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.99;ReadPosRankSum=-1.723;SOR=1.596 GT:AD:DP:GQ:PL 0/1:45,43:88:99:1259,0,1243 chr2 229843069 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 229860252 . C T 215.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.549;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.98;ReadPosRankSum=0.079;SOR=1.022 GT:AD:DP:GQ:PL 0/1:5,7:12:99:244,0,173 chr2 229860714 . G A 84.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=21.19;ReadPosRankSum=1.150;SOR=1.609 GT:AD:DP:GQ:PL 0/1:1,3:4:30:113,0,30 chr2 229879854 . C T 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 229922124 . A C 250.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.72;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,7:7:21:279,21,0 chr2 229976358 . C T 396.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.011;ClippingRankSum=0.000;DP=54;ExcessHet=3.0103;FS=4.032;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.35;ReadPosRankSum=-0.132;SOR=1.264 GT:AD:DP:GQ:PL 0/1:35,19:54:99:425,0,925 chr2 229996803 . G T 520.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.285;ClippingRankSum=0.000;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.40;ReadPosRankSum=0.609;SOR=0.693 GT:AD:DP:GQ:PL 0/1:21,21:42:99:549,0,530 chr2 230049645 . G C 927.77 PASS AC=2;AF=1.00;AN=2;DP=23;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.27;SOR=6.358 GT:AD:DP:GQ:PL 1/1:0,23:23:69:956,69,0 chr2 230050050 . T C 1828.77 PASS AC=2;AF=1.00;AN=2;DP=49;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.45;SOR=4.450 GT:AD:DP:GQ:PL 1/1:0,49:49:99:1857,147,0 chr2 230058860 . C T 105.03 PASS AC=2;AF=1.00;AN=2;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.26;SOR=1.609 GT:AD:DP:GQ:PL 1/1:0,4:4:12:133,12,0 chr2 230059004 . G A 511.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.951;ClippingRankSum=0.000;DP=47;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.89;ReadPosRankSum=-0.946;SOR=0.775 GT:AD:DP:GQ:PL 0/1:27,20:47:99:540,0,848 chr2 230060978 . A C 56.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.37;SOR=2.303 GT:AD:DP:GQ:PL 1/1:0,2:2:6:84,6,0 chr2 230079237 . G C 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.50;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 230079239 . C T 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.50;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 230079264 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.50;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 230079269 . A G 62.74 PASS AC=2;AF=1.00;AN=2;DP=2;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=59.50;QD=31.37;SOR=0.693 GT:AD:DP:GQ:PL 1/1:0,2:2:6:90,6,0 chr2 230083508 . T C 50.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=0.000;SOR=0.916 GT:AD:DP:GQ:PL 0/1:1,3:4:30:79,0,30 chr2 230160829 . T G 110.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.349;ClippingRankSum=0.000;DP=12;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.23;ReadPosRankSum=1.807;SOR=0.412 GT:AD:DP:GQ:PL 0/1:7,5:12:99:139,0,222 chr2 230185853 . G A 323.78 PASS AC=2;AF=1.00;AN=2;DP=9;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=35.20;SOR=4.615 GT:AD:DP:GQ:PL 1/1:0,9:9:27:352,27,0 chr2 230185999 . A G 2951.77 PASS AC=2;AF=1.00;AN=2;DP=95;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=31.07;SOR=1.227 GT:AD:DP:GQ:PL 1/1:0,95:95:99:2980,285,0 chr2 230207994 . C T 1545.77 PASS AC=2;AF=1.00;AN=2;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=29.17;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,53:53:99:1574,158,0 chr2 230211317 . G T 799.77 PASS AC=2;AF=1.00;AN=2;DP=20;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.14;SOR=6.091 GT:AD:DP:GQ:PL 1/1:0,20:20:60:828,60,0 chr2 230211574 . T G 3286.77 PASS AC=2;AF=1.00;AN=2;DP=101;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.87;SOR=1.911 GT:AD:DP:GQ:PL 1/1:0,100:100:99:3315,300,0 chr2 230212645 . A G 2740.77 PASS AC=2;AF=1.00;AN=2;DP=84;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=33.02;SOR=1.048 GT:AD:DP:GQ:PL 1/1:0,83:83:99:2769,249,0 chr2 230213010 . A G 4584.77 PASS AC=2;AF=1.00;AN=2;DP=140;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.75;SOR=0.945 GT:AD:DP:GQ:PL 1/1:0,140:140:99:4613,419,0 chr2 230213153 . A G 1354.77 PASS AC=2;AF=1.00;AN=2;DP=39;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=34.74;SOR=2.891 GT:AD:DP:GQ:PL 1/1:0,39:39:99:1383,117,0 chr2 230213196 . A C 787.77 PASS AC=2;AF=1.00;AN=2;DP=22;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.01;SOR=3.912 GT:AD:DP:GQ:PL 1/1:0,22:22:66:816,66,0 chr2 230213279 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 230216669 . T C 801.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.172;ClippingRankSum=0.000;DP=36;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=22.27;ReadPosRankSum=-1.213;SOR=0.358 GT:AD:DP:GQ:PL 0/1:15,21:36:99:830,0,1149 chr2 230216690 . T C 998.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.402;ClippingRankSum=0.000;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=20.81;ReadPosRankSum=0.434;SOR=0.631 GT:AD:DP:GQ:PL 0/1:21,27:48:99:1027,0,1290 chr2 230238470 . A G 1483.77 PASS AC=2;AF=1.00;AN=2;DP=42;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=37.31;SOR=3.056 GT:AD:DP:GQ:PL 1/1:0,42:42:99:1512,126,0 chr2 230239764 . C A 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=27.64;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 230239775 . C T 107.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.10;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:135,9,0 chr2 230241529 . G C 364.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.970;ClippingRankSum=0.000;DP=45;ExcessHet=3.0103;FS=1.291;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=8.11;ReadPosRankSum=0.170;SOR=0.483 GT:AD:DP:GQ:PL 0/1:28,17:45:99:393,0,801 chr2 230243413 . A G 97.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=32.43;SOR=2.833 GT:AD:DP:GQ:PL 1/1:0,3:3:9:125,9,0 chr2 230245867 . C T 793.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.701;ClippingRankSum=0.000;DP=73;ExcessHet=3.0103;FS=2.002;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.87;ReadPosRankSum=0.020;SOR=1.052 GT:AD:DP:GQ:PL 0/1:38,35:73:99:822,0,947 chr2 230248784 . G A 156.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=8;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.60;ReadPosRankSum=-0.489;SOR=1.179 GT:AD:DP:GQ:PL 0/1:3,5:8:99:185,0,101 chr2 230249195 . T C 263.80 PASS AC=2;AF=1.00;AN=2;DP=7;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=30.64;SOR=4.174 GT:AD:DP:GQ:PL 1/1:0,7:7:21:292,21,0 chr2 230249234 . C G 43.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.674;ClippingRankSum=0.000;DP=4;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.94;ReadPosRankSum=0.431;SOR=0.693 GT:AD:DP:GQ:PL 0/1:2,2:4:59:72,0,59 chr2 230250739 . G C 307.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=27;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=11.40;ReadPosRankSum=1.275;SOR=0.317 GT:AD:DP:GQ:PL 0/1:17,10:27:99:336,0,627 chr2 230250888 . T C 1064.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.046;ClippingRankSum=0.000;DP=97;ExcessHet=3.0103;FS=0.764;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.98;ReadPosRankSum=-0.117;SOR=0.597 GT:AD:DP:GQ:PL 0/1:50,47:97:99:1093,0,1354 chr2 230250915 . A T 833.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.845;ClippingRankSum=0.000;DP=85;ExcessHet=3.0103;FS=0.870;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.81;ReadPosRankSum=1.671;SOR=0.551 GT:AD:DP:GQ:PL 0/1:49,36:85:99:862,0,1346 chr2 230253471 . G A 1512.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-2.926;ClippingRankSum=0.000;DP=107;ExcessHet=3.0103;FS=2.549;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.14;ReadPosRankSum=-0.804;SOR=1.002 GT:AD:DP:GQ:PL 0/1:45,62:107:99:1541,0,1252 chr2 230255199 . G C 192.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.842;ClippingRankSum=0.000;DP=10;ExcessHet=3.0103;FS=3.979;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=19.28;ReadPosRankSum=0.842;SOR=2.584 GT:AD:DP:GQ:PL 0/1:4,6:10:99:221,0,105 chr2 230270947 . A G 81.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.35;ReadPosRankSum=-0.524;SOR=1.022 GT:AD:DP:GQ:PL 0/1:2,3:5:68:110,0,68 chr2 230284382 . T C 866.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.608;ClippingRankSum=0.000;DP=65;ExcessHet=3.0103;FS=3.451;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.33;ReadPosRankSum=1.509;SOR=0.440 GT:AD:DP:GQ:PL 0/1:28,37:65:99:895,0,669 chr2 230284393 . G A 2393.77 PASS AC=2;AF=1.00;AN=2;DP=62;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=28.11;SOR=0.899 GT:AD:DP:GQ:PL 1/1:0,62:62:99:2422,186,0 chr2 230290698 . T A 783.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.022;ClippingRankSum=0.000;DP=56;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.00;ReadPosRankSum=-1.070;SOR=0.800 GT:AD:DP:GQ:PL 0/1:24,32:56:99:812,0,671 chr2 230292556 . T C 2740.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.720;ClippingRankSum=0.000;DP=217;ExcessHet=3.0103;FS=0.527;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.69;ReadPosRankSum=-0.169;SOR=0.768 GT:AD:DP:GQ:PL 0/1:117,99:216:99:2769,0,3146 chr2 230292812 . G A 1942.77 PASS AC=2;AF=1.00;AN=2;DP=48;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=26.92;SOR=6.358 GT:AD:DP:GQ:PL 1/1:0,48:48:99:1971,144,0 chr2 230297626 . G T 260.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=15;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=17.38;ReadPosRankSum=-1.111;SOR=0.223 GT:AD:DP:GQ:PL 0/1:7,8:15:99:289,0,247 chr2 230309705 . G A 47.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.036;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=9.55;ReadPosRankSum=-0.126;SOR=0.223 GT:AD:DP:GQ:PL 0/1:2,3:5:69:76,0,69 chr2 230311048 . G A 651.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.380;ClippingRankSum=0.000;DP=29;ExcessHet=3.0103;FS=1.708;MLEAC=1;MLEAF=0.500;MQ=57.95;MQRankSum=2.411;QD=22.47;ReadPosRankSum=-0.603;SOR=0.358 GT:AD:DP:GQ:PL 0/1:9,20:29:99:680,0,289 chr2 230317231 . A G 48.28 PASS AC=2;AF=1.00;AN=2;DP=3;ExcessHet=3.0103;FS=0.000;MLEAC=2;MLEAF=1.00;MQ=60.00;QD=16.09;SOR=1.179 GT:AD:DP:GQ:PL 1/1:0,3:3:9:76,9,0 chr2 230327041 . C T 323.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.066;ClippingRankSum=0.000;DP=32;ExcessHet=3.0103;FS=1.475;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.12;ReadPosRankSum=2.082;SOR=0.412 GT:AD:DP:GQ:PL 0/1:18,14:32:99:352,0,485 chr2 230357784 . T C 624.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=1.388;ClippingRankSum=0.000;DP=53;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=12.01;ReadPosRankSum=1.251;SOR=0.576 GT:AD:DP:GQ:PL 0/1:27,25:52:99:653,0,618 chr2 230357940 . G T 457.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=2.199;ClippingRankSum=0.000;DP=33;ExcessHet=3.0103;FS=3.412;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.87;ReadPosRankSum=2.370;SOR=1.531 GT:AD:DP:GQ:PL 0/1:20,13:33:99:486,0,980 chr2 230357960 . T C 469.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.269;ClippingRankSum=0.000;DP=28;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.78;ReadPosRankSum=-1.264;SOR=0.839 GT:AD:DP:GQ:PL 0/1:15,13:28:99:498,0,876 chr2 230359279 . A G 99.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.396;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=7.67;ReadPosRankSum=-1.270;SOR=0.804 GT:AD:DP:GQ:PL 0/1:9,4:13:99:128,0,325 chr2 230361303 . G A 123.78 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=5;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=24.76;ReadPosRankSum=0.253;SOR=1.981 GT:AD:DP:GQ:PL 0/1:1,4:5:27:152,0,27 chr2 230371171 . C T 147.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.000;ClippingRankSum=0.000;DP=11;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.43;ReadPosRankSum=-0.605;SOR=0.551 GT:AD:DP:GQ:PL 0/1:6,5:11:99:176,0,218 chr2 230390204 . C T 444.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.130;ClippingRankSum=0.000;DP=43;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=10.34;ReadPosRankSum=1.273;SOR=0.301 GT:AD:DP:GQ:PL 0/1:27,16:43:99:473,0,964 chr2 230392097 . A G 4638.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.593;ClippingRankSum=0.000;DP=314;ExcessHet=3.0103;FS=0.859;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.82;ReadPosRankSum=-0.233;SOR=0.748 GT:AD:DP:GQ:PL 0/1:143,170:313:99:4667,0,3656 chr2 230393503 . A T 562.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.770;ClippingRankSum=0.000;DP=41;ExcessHet=3.0103;FS=1.273;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=13.73;ReadPosRankSum=-0.521;SOR=0.399 GT:AD:DP:GQ:PL 0/1:19,22:41:99:591,0,531 chr2 230393594 . T A 253.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-0.674;ClippingRankSum=0.000;DP=17;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=14.93;ReadPosRankSum=1.476;SOR=1.179 GT:AD:DP:GQ:PL 0/1:7,10:17:99:282,0,200 chr2 230393607 . A G 208.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=-1.655;ClippingRankSum=0.000;DP=13;ExcessHet=3.0103;FS=0.000;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=16.06;ReadPosRankSum=0.271;SOR=1.022 GT:AD:DP:GQ:PL 0/1:4,9:13:99:237,0,128 chr2 230396905 . G A 346.77 PASS AC=1;AF=0.500;AN=2;BaseQRankSum=0.967;ClippingRankSum=0.000;DP=22;ExcessHet=3.0103;FS=1.837;MLEAC=1;MLEAF=0.500;MQ=60.00;MQRankSum=0.000;QD=15.76;ReadPosRankS