##fileformat=VCFv4.1 ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##FORMAT= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##INFO= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##FILTER= ##annotator=MARS ##UnifiedGenotyper="analysis_type=UnifiedGenotyper input_file=[D:\Illumina\MiSeqAnalysis\180502_M03874_0080_000000000-BNP6L\Data\Intensities\BaseCalls\Alignment\21_S21.bam] read_buffer_size=null phone_home=NO_ET gatk_key=null read_filter=[] intervals=[D:\Illumina\MiSeqAnalysis\180502_M03874_0080_000000000-BNP6L\Data\Intensities\BaseCalls\Alignment\Segment_intervals_M1.0.picard] excludeIntervals=null interval_set_rule=UNION interval_merging=ALL reference_sequence=C:\Illumina\MiSeq Reporter\Genomes\Homo_sapiens\UCSC\hg19\Sequence\WholeGenomeFasta\genome.fa nonDeterministicRandomSeed=false downsampling_type=BY_SAMPLE downsample_to_fraction=null downsample_to_coverage=5000 baq=OFF baqGapOpenPenalty=40.0 performanceLog=null useOriginalQualities=false BQSR=null quantize_quals=-1 defaultBaseQualities=-1 validation_strictness=SILENT unsafe=null num_threads=1 num_cpu_threads=null num_io_threads=null num_bam_file_handles=null read_group_black_list=null pedigree=[] pedigreeString=[] pedigreeValidationType=STRICT allow_intervals_with_unindexed_bam=false logging_level=OFF log_to_file=null help=false genotype_likelihoods_model=BOTH p_nonref_model=EXACT heterozygosity=0.0010 pcr_error_rate=1.0E-4 genotyping_mode=DISCOVERY output_mode=EMIT_ALL_SITES standard_min_confidence_threshold_for_calling=1.0 standard_min_confidence_threshold_for_emitting=30.0 noSLOD=false annotateNDA=false alleles=(RodBinding name= source=UNBOUND) min_base_quality_score=17 max_deletion_fraction=0.05 max_alternate_alleles=3 min_indel_count_for_genotyping=5 min_indel_fraction_per_sample=0.25 indel_heterozygosity=1.25E-4 indelGapContinuationPenalty=10 indelGapOpenPenalty=45 indelHaplotypeSize=80 noBandedIndel=false indelDebug=false ignoreSNPAlleles=false includeGVCFData=true dbsnp=(RodBinding name= source=UNBOUND) comp=[] out=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub NO_HEADER=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub sites_only=org.broadinstitute.sting.gatk.io.stubs.VCFWriterStub debug_file=null metrics_file=null annotation=[] excludeAnnotation=[] filter_mismatching_base_and_quals=false" ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##contig= ##reference=file://C:\Illumina\MiSeq Reporter\Genomes\Homo_sapiens\UCSC\hg19\Sequence\WholeGenomeFasta\genome.fa ##gvcftools_version="0.12.1" ##gvcftools_cmdline="C:\Illumina\MiSeq Reporter\Workflows\PcrAmpliconWorker\gatk_to_gvcf.exe --no-default-filters --min-qd 0.0000 --min-gqx 10.0000 --min-mq 0.0000" ##source=GATK 1.6 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT 21 chrM 3307 . C . . PASS END=3406;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:979:99:60 chrM 3407 . C . . PASS END=3451;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:774:99:60 chrM 3452 . T . . PASS END=3492;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:625:99:60 chrM 3493 . A . 760.97 PASS DP=636;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:500:636:99:60:99 chrM 3494 . C . . PASS END=3523;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:677:99:60 chrM 3524 . A . . PASS END=3545;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:482:99:60 chrM 3546 . C . . PASS END=3562;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:352:99:60 chrM 3563 . T . . PASS END=3573;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:234:99:60 chrM 3574 . C . . PASS END=3602;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:317:99:60 chrM 3603 . A . . PASS END=3629;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:441:99:60 chrM 3630 . C . . PASS END=3660;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:676:99:60 chrM 3661 . A . . PASS END=3734;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:868:99:60 chrM 3735 . A . . PASS END=4054;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1077:99:54 chrM 4055 . C . . PASS END=4179;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1303:99:43 chrM 4180 . A . . PASS END=4238;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1076:99:42 chrM 4239 . T . . PASS END=4263;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1065:99:47 chrM 4470 . A . . PASS END=4529;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:714:99:37 chrM 4530 . A . . PASS END=4557;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:511:99:33 chrM 4558 . T . . PASS END=4579;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:421:99:29 chrM 4580 . T . . PASS END=4654;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:329:99:27 chrM 4655 . C . . PASS END=4703;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:295:99:33 chrM 4704 . T C 8936.98 PASS BaseQRankSum=1.457;DP=328;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=16.5479;MQ=40;MQ0=26;MQRankSum=1.594;QD=27.25;ReadPosRankSum=1.331;SB=-4894.83 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:1,327:328:99:8937,660,0:40:99:0.997 chrM 4705 . A . . PASS END=4828;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:321:99:40 chrM 4829 . A . . PASS END=4912;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:375:99:53 chrM 4913 . C . . PASS END=5068;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:466:99:55 chrM 5069 . T . . PASS END=5141;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:408:99:50 chrM 5142 . C . . PASS END=5175;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:413:99:46 chrM 5176 . A . . PASS END=5318;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:364:99:43 chrM 5319 . C . . PASS END=5381;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:337:99:56 chrM 5382 . A . . PASS END=5397;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:278:99:59 chrM 5398 . A . . PASS END=5434;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:208:99:59 chrM 5435 . C . . PASS END=5455;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:179:99:59 chrM 5456 . T . . PASS END=5512;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:170:99:53 chrM 5904 . G . . PASS END=5959;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:297:99:39 chrM 5960 . A . . PASS END=6179;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:368:99:39 chrM 6180 . G . . PASS END=6427;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:418:99:51 chrM 6428 . C . . PASS END=6739;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:503:99:47 chrM 6740 . C . . PASS END=6861;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:403:99:36 chrM 6862 . G . . PASS END=6981;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:503:99:44 chrM 6982 . A . . PASS END=7022;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:378:99:41 chrM 7023 . T . . PASS END=7028;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:343:99:38 chrM 7029 . T C 8956.04 PASS DP=341;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=29.7177;MQ=38;MQ0=21;QD=26.26;SB=-4658.49 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,339:341:99:8956,728,0:38:99:1.000 chrM 7030 . C . . PASS END=7095;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:321:99:35 chrM 7096 . C . . PASS END=7114;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:420:99:38 chrM 7115 . C . . PASS END=7196;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:461:99:45 chrM 7197 . C . . PASS END=7311;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:426:99:53 chrM 7312 . T . . PASS END=7383;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:338:99:47 chrM 7384 . T . . PASS END=7413;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:271:99:39 chrM 7414 . A . . PASS END=7446;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:241:99:38 chrM 7586 . A . . PASS END=7632;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:315:99:49 chrM 7633 . T . . PASS END=7697;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:401:99:53 chrM 7698 . G . . PASS END=7774;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:419:99:54 chrM 7775 . C . . PASS END=7891;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:388:99:54 chrM 7892 . C . . PASS END=7965;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:505:99:55 chrM 7966 . T . . PASS END=8078;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:595:99:56 chrM 8079 . G . . PASS END=8156;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:657:99:59 chrM 8157 . G . . PASS END=8223;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:666:99:57 chrM 8224 . T . . PASS END=8267;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:594:99:51 chrM 8366 . A . . PASS END=8430;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:573:99:48 chrM 8431 . T . . PASS END=8606;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:450:99:55 chrM 8607 . C . . PASS END=8642;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:586:99:56 chrM 8643 . A . . PASS END=8701;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:766:99:58 chrM 8702 . G A 28019.64 PASS BaseQRankSum=4.217;DP=1047;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=52.3235;MQ=57;MQ0=0;MQRankSum=0.973;QD=26.76;ReadPosRankSum=-0.278;SB=-18177.41 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:6,1036:1047:99:28020,2028,0:57:99:0.994 chrM 8703 . C . . PASS END=8745;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:855:99:48 chrM 8746 . A . . PASS END=8810;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:700:99:37 chrM 8811 . C . . PASS END=8924;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:671:99:36 chrM 8925 . C . . PASS END=9205;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:895:99:46 chrM 9207 . A . . PASS END=9341;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:932:99:53 chrM 9342 . A . . PASS END=9372;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:657:99:50 chrM 9373 . C . . PASS END=9377;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:567:99:48 chrM 9378 . G A 13912.84 PASS BaseQRankSum=2.228;DP=551;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=33.7943;MQ=47;MQ0=61;MQRankSum=-1.093;QD=25.25;ReadPosRankSum=0.525;SB=-6945.67 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:2,547:551:99:13913,1023,0:47:99:0.996 chrM 9379 . T . . PASS END=9455;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:422:99:45 chrM 9456 . A . . PASS END=9470;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:342:99:44 chrM 9471 . C . . PASS END=9516;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:250:99:43 chrM 9517 . T . . PASS END=9528;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:192:99:49 chrM 9529 . C . . PASS END=9530;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:161:99:52 chrM 9531 . T C 4259.37 PASS DP=160;Dels=0.00;FS=0.000;HRun=4;HaplotypeScore=21.1095;MQ=53;MQ0=2;QD=26.62;SB=-2092.75 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,159:160:99:4259,322,0:53:99:1.000 chrM 9532 . A . . PASS END=9540;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:137:99:53 chrM 9541 . C T 4107.74 PASS BaseQRankSum=2.264;DP=163;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=23.1421;MQ=55;MQ0=2;MQRankSum=0.904;QD=25.20;ReadPosRankSum=-2.218;SB=-2250.71 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:2,159:163:99:4108,313,0:55:99:0.988 chrM 9542 . T . . PASS END=9580;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:135:99:53 chrM 9581 . A . . PASS END=9597;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:181:99:52 chrM 9598 . C . . PASS END=9622;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:296:99:51 chrM 9623 . C . . PASS END=9789;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:401:99:51 chrM 9790 . T . . PASS END=9991;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:359:99:60 chrM 10059 . A . . PASS END=10122;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:414:99:60 chrM 10123 . T . . PASS END=10191;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:360:99:60 chrM 10192 . T . . PASS END=10278;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:380:99:60 chrM 10279 . C . . PASS END=10398;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:468:99:60 chrM 10399 . G A 15599.34 PASS BaseQRankSum=1.700;DP=544;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=27.0418;MQ=60;MQ0=0;MQRankSum=-0.093;QD=28.68;ReadPosRankSum=0.554;SB=-9122.37 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:1,540:544:99:15599,1123,0:60:99:0.998 chrM 10400 . C . . PASS END=10405;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:537:99:60 chrM 10470 . A . . PASS END=10527;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:576:99:59 chrM 10528 . C . . PASS END=10591;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:715:99:59 chrM 10592 . T . . PASS END=10699;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:778:99:60 chrM 10700 . T . . PASS END=10753;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:637:99:60 chrM 10754 . T . . PASS END=10819;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:491:99:59 chrM 10820 . G A 14556.89 PASS BaseQRankSum=2.769;DP=510;Dels=0.00;FS=0.000;HRun=5;HaplotypeScore=28.6233;MQ=59;MQ0=2;MQRankSum=-0.646;QD=28.54;ReadPosRankSum=1.192;SB=-7798.48 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:3,506:510:99:14557,1051,0:59:99:0.994 chrM 10821 . C . . PASS END=10873;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:418:99:59 chrM 10874 . C T 11368.93 PASS DP=413;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=34.7487;MQ=60;MQ0=0;QD=27.53;SB=-6677.94 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,411:413:99:11369,830,0:60:99:1.000 chrM 10875 . C . . PASS END=10924;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:305:99:60 chrM 10925 . C . . PASS END=10954;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:248:99:59 chrM 10955 . C . . PASS END=10973;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:329:99:58 chrM 10974 . C . . PASS END=11017;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:427:99:56 chrM 11018 . C T 12636.99 PASS BaseQRankSum=3.737;DP=464;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=48.1615;MQ=56;MQ0=16;MQRankSum=1.532;QD=27.23;ReadPosRankSum=0.649;SB=-6059.54 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:5,457:464:99:12637,942,0:56:99:0.989 chrM 11019 . G . . PASS END=11051;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:460:99:56 chrM 11052 . A . . PASS END=11099;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:522:99:57 chrM 11100 . G . . PASS END=11209;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:577:99:59 chrM 11210 . A . . PASS END=11343;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:732:99:60 chrM 11344 . T . . PASS END=11664;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:839:99:57 chrM 11665 . T . . PASS END=11719;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:658:99:57 chrM 11720 . A G 19166.07 PASS BaseQRankSum=2.474;DP=655;Dels=0.00;FS=0.000;HRun=2;HaplotypeScore=34.5313;MQ=57;MQ0=6;MQRankSum=-0.657;QD=29.26;ReadPosRankSum=-0.893;SB=-10658.36 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:3,649:655:99:19166,1385,0:57:99:0.995 chrM 11721 . C . . PASS END=11722;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:666:99:57 chrM 11723 . C T 21269.91 PASS DP=668;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=37.5139;MQ=57;MQ0=6;QD=31.84;SB=-12589.98 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,666:668:99:21270,1571,0:57:99:1.000 chrM 11724 . A . . PASS END=11837;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:689:99:58 chrM 11838 . C . . PASS END=11887;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:895:99:57 chrM 11888 . G A 26971.90 PASS DP=907;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=49.8000;MQ=57;MQ0=16;QD=29.74;SB=-13486.15 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,906:907:99:26972,1953,0:57:99:1.000 chrM 11889 . G . . PASS END=12032;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:789:99:57 chrM 12033 . A . . PASS END=12124;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:616:99:59 chrM 12125 . C . . PASS END=12138;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:580:99:60 chrM 12337 . A . . PASS END=12352;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:637:99:60 chrM 12353 . A . . PASS END=12578;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:695:99:60 chrM 12579 . A . . PASS END=12598;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:911:99:60 chrM 12599 . A . . PASS END=12630;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1213:99:60 chrM 12631 . G . . PASS END=12633;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1581:99:60 chrM 12634 . C T 43338.92 PASS BaseQRankSum=4.034;DP=1590;Dels=0.00;FS=3.475;HRun=0;HaplotypeScore=66.0628;MQ=60;MQ0=0;MQRankSum=3.045;QD=27.26;ReadPosRankSum=9.311;SB=-24742.35 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:50,1538:1590:99:43339,2186,0:60:99:0.969 chrM 12635 . A . . PASS END=12705;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1466:99:60 chrM 12706 . T C 47154.77 PASS DP=1676;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=105.1694;MQ=60;MQ0=2;QD=28.14;SB=-25655.72 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,1676:1676:99:47155,3350,0:60:99:1.000 chrM 12707 . T . . PASS END=12850;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1676:99:58 chrM 12851 . G A 49302.42 PASS BaseQRankSum=2.852;DP=1840;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=78.0198;MQ=59;MQ0=33;MQRankSum=1.668;QD=26.79;ReadPosRankSum=2.411;SB=-28794.81 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:3,1833:1840:99:49302,3533,0:59:99:0.998 chrM 12852 . T . . PASS END=12939;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1514:99:59 chrM 12940 . A . . PASS END=12982;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1204:99:58 chrM 12983 . C . . PASS END=13020;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:869:99:58 chrM 13021 . T C 505.90 LowVariantFreq BaseQRankSum=-0.381;DP=897;Dels=0.00;FS=4.648;HRun=1;HaplotypeScore=90.0801;MQ=59;MQ0=10;MQRankSum=1.006;QD=0.56;ReadPosRankSum=-4.722;SB=-258.93 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:796,97:897:99:536,0,18970:59:99:0.109 chrM 13022 . C . . PASS END=13023;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:851:99:58 chrM 13024 . C T 437.71 LowVariantFreq BaseQRankSum=-1.353;DP=851;Dels=0.00;FS=3.292;HRun=1;HaplotypeScore=57.2232;MQ=58;MQ0=10;MQRankSum=0.141;QD=0.51;ReadPosRankSum=-6.460;SB=-144.29 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:763,88:851:99:468,0,18517:58:99:0.103 chrM 13025 . C . . PASS END=13062;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:692:99:57 chrM 13063 . A T 910.37 LowVariantFreq BaseQRankSum=1.107;DP=878;Dels=0.00;FS=3.418;HRun=0;HaplotypeScore=61.6662;MQ=57;MQ0=18;MQRankSum=-6.045;QD=1.04;ReadPosRankSum=-8.075;SB=-646.42 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:747,128:878:99:940,0,17738:57:99:0.146 chrM 13064 . G . . PASS END=13069;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:925:99:58 chrM 13070 . G . . PASS END=13108;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1195:99:58 chrM 13109 . T . . PASS END=13160;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1428:99:58 chrM 13161 . C . . PASS END=13174;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1762:99:58 chrM 13175 . T C 1296.06 LowVariantFreq BaseQRankSum=-3.878;DP=2101;Dels=0.00;FS=8.789;HRun=1;HaplotypeScore=180.7281;MQ=58;MQ0=46;MQRankSum=2.599;QD=0.62;ReadPosRankSum=-14.344;SB=-894.09 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1858,242:2101:99:1326,0,46479:58:99:0.115 chrM 13176 . T . . PASS END=13386;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1749:99:58 chrM 13387 . T C 887.74 LowVariantFreq BaseQRankSum=-6.772;DP=1976;Dels=0.00;FS=17.520;HRun=0;HaplotypeScore=101.7057;MQ=58;MQ0=26;MQRankSum=-6.715;QD=0.45;ReadPosRankSum=-16.876;SB=-38.58 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1770,204:1976:99:918,0,45572:58:99:0.103 chrM 13388 . A . . PASS END=13440;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1673:99:58 chrM 13441 . C T 79.29 LowVariantFreq BaseQRankSum=-2.113;DP=1741;Dels=0.00;FS=7.545;HRun=1;HaplotypeScore=135.8683;MQ=58;MQ0=25;MQRankSum=-5.524;QD=0.05;ReadPosRankSum=-7.486;SB=-0.01 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1583,157:1741:99:109,0,39765:58:79:0.090 chrM 13442 . A . . PASS END=13534;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1368:99:57 chrM 13535 . A . . PASS END=13563;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1349:99:57 chrM 13564 . A G 140.82 LowVariantFreq BaseQRankSum=-4.266;DP=1448;Dels=0.00;FS=5.894;HRun=0;HaplotypeScore=80.1183;MQ=57;MQ0=45;MQRankSum=-6.061;QD=0.10;ReadPosRankSum=-11.265;SB=-0.01 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1289,157:1448:99:171,0,32946:57:99:0.109 chrM 13565 . T . . PASS END=13593;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1155:99:57 chrM 13594 . A . . PASS END=13621;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:956:99:56 chrM 13622 . C . . PASS END=13651;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:797:99:56 chrM 13652 . A G 45.51 LowVariantFreq BaseQRankSum=1.428;DP=822;Dels=0.00;FS=1.701;HRun=0;HaplotypeScore=73.9858;MQ=57;MQ0=16;MQRankSum=-3.589;QD=0.06;ReadPosRankSum=-1.846;SB=-0.01 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:720,93:822:75.50:76,0,16407:57:46:0.114 chrM 13653 . C . . PASS END=13656;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:649:99:57 chrM 13657 . T C 794.07 LowVariantFreq BaseQRankSum=-1.237;DP=667;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=61.5487;MQ=57;MQ0=12;MQRankSum=-4.843;QD=1.19;ReadPosRankSum=-1.329;SB=-561.65 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:555,108:667:99:824,0,13173:57:99:0.163 chrM 13658 . A . . PASS END=13674;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:528:99:56 chrM 13675 . T C 337.67 LowVariantFreq BaseQRankSum=-5.381;DP=564;Dels=0.00;FS=1.791;HRun=0;HaplotypeScore=54.5169;MQ=56;MQ0=10;MQRankSum=-3.764;QD=0.60;ReadPosRankSum=-7.257;SB=-185.27 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:489,74:564:99:368,0,11189:56:99:0.131 chrM 13676 . A . . PASS END=13758;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:510:99:56 chrM 13759 . C . . PASS END=13782;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:419:99:60 chrM 13783 . C . . PASS END=13785;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:655:99:59 chrM 13786 . C A 303.86 LowVariantFreq BaseQRankSum=0.998;DP=664;Dels=0.00;FS=6.462;HRun=0;HaplotypeScore=120.6864;MQ=59;MQ0=0;MQRankSum=-0.145;QD=0.46;ReadPosRankSum=-3.606;SB=-235.55 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:596,68:664:99:334,0,14163:59:99:0.102 chrM 13787 . C . . PASS END=13788;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:668:99:59 chrM 13789 . C T 249.71 LowVariantFreq BaseQRankSum=3.716;DP=697;Dels=0.00;FS=5.313;HRun=1;HaplotypeScore=103.5781;MQ=59;MQ0=0;MQRankSum=1.720;QD=0.36;ReadPosRankSum=-8.018;SB=-238.15 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:629,68:697:99:280,0,14803:59:99:0.098 chrM 13790 . T . . PASS END=13805;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:692:99:59 chrM 13806 . C . . PASS END=13820;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:866:99:59 chrM 13821 . T C 1486.60 LowVariantFreq BaseQRankSum=-0.079;DP=1048;Dels=0.00;FS=4.990;HRun=2;HaplotypeScore=90.1969;MQ=59;MQ0=2;MQRankSum=-2.795;QD=1.42;ReadPosRankSum=-9.725;SB=-1228.67 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:890,154:1048:99:1517,0,20447:59:99:0.148 chrM 13822 . C . . PASS END=13845;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1030:99:58 chrM 13846 . C T 625.64 LowVariantFreq BaseQRankSum=-3.043;DP=1208;Dels=0.00;FS=3.633;HRun=0;HaplotypeScore=62.5023;MQ=58;MQ0=2;MQRankSum=0.341;QD=0.52;ReadPosRankSum=-7.339;SB=-579.23 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1076,129:1208:99:656,0,24816:58:99:0.107 chrM 13847 . C . . PASS END=13887;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1151:99:58 chrM 13888 . A . . PASS END=13929;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:772:99:59 chrM 13930 . C . . PASS END=13945;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1009:99:60 chrM 13946 . A G 960.11 LowVariantFreq BaseQRankSum=-5.325;DP=1271;Dels=0.00;FS=8.711;HRun=0;HaplotypeScore=80.0681;MQ=59;MQ0=7;MQRankSum=-3.126;QD=0.76;ReadPosRankSum=-13.159;SB=-747.33 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1109,158:1271:99:990,0,27728:59:99:0.125 chrM 13947 . T . . PASS END=13950;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1293:99:59 chrM 13951 . C T 1467.55 LowVariantFreq BaseQRankSum=-1.658;DP=1329;Dels=0.00;FS=9.893;HRun=1;HaplotypeScore=78.2821;MQ=59;MQ0=7;MQRankSum=-0.503;QD=1.10;ReadPosRankSum=-13.808;SB=-1249.29 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1142,185:1329:99:1498,0,29379:59:99:0.139 chrM 13952 . T . . PASS END=13997;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1219:99:59 chrM 13998 . A . . PASS END=14040;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1480:99:59 chrM 14041 . G A 71.59 LowVariantFreq BaseQRankSum=-4.463;DP=1647;Dels=0.00;FS=0.704;HRun=1;HaplotypeScore=108.3389;MQ=59;MQ0=17;MQRankSum=-2.771;QD=0.04;ReadPosRankSum=-12.906;SB=-110.89 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1497,145:1647:99:102,0,35902:59:72:0.088 chrM 14042 . C . . PASS END=14088;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1616:99:58 chrM 14089 . T C 755.68 LowVariantFreq BaseQRankSum=-1.526;DP=1727;Dels=0.00;FS=0.296;HRun=0;HaplotypeScore=114.7056;MQ=58;MQ0=36;MQRankSum=-2.030;QD=0.44;ReadPosRankSum=-12.370;SB=-779.93 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1515,210:1727:99:786,0,37430:58:99:0.122 chrM 14090 . A . . PASS END=14097;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1721:99:58 chrM 14098 . C T 719.27 LowVariantFreq BaseQRankSum=-4.138;DP=1685;Dels=0.00;FS=3.096;HRun=2;HaplotypeScore=135.0471;MQ=58;MQ0=31;MQRankSum=-0.820;QD=0.43;ReadPosRankSum=-13.228;SB=-440.74 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1488,194:1684:99:749,0,36221:58:99:0.115 chrM 14099 . T . . PASS END=14146;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1552:99:57 chrM 14149 . A . . PASS . GT:DP:GQX:MQ 0/0:1586:99:57 chrM 14150 . C T 372.45 LowVariantFreq BaseQRankSum=-1.266;DP=1557;Dels=0.00;FS=20.720;HRun=0;HaplotypeScore=112.7856;MQ=57;MQ0=27;MQRankSum=-5.068;QD=0.24;ReadPosRankSum=-7.326;SB=-0.01 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1392,163:1557:99:402,0,35437:57:99:0.105 chrM 14151 . C . . PASS END=14170;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1445:99:57 chrM 14171 . A T 2521.58 LowVariantFreq BaseQRankSum=-6.580;DP=1693;Dels=0.00;FS=17.672;HRun=0;HaplotypeScore=80.5160;MQ=57;MQ0=17;MQRankSum=-1.539;QD=1.49;ReadPosRankSum=-15.160;SB=-555.33 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1478,213:1693:99:2552,0,37190:57:99:0.126 chrM 14172 . A . . PASS . GT:DP:GQX:MQ 0/0:1697:99:57 chrM 14173 . T G 2215.06 LowVariantFreq BaseQRankSum=-9.603;DP=1700;Dels=0.00;FS=27.220;HRun=0;HaplotypeScore=128.8327;MQ=57;MQ0=16;MQRankSum=-1.109;QD=1.30;ReadPosRankSum=-17.851;SB=-425.11 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1481,214:1700:99:2245,0,36882:57:99:0.126 chrM 14174 . T . . PASS END=14182;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1512:99:56 chrM 14183 . T . . LowGQX . GT:DP:GQX:MQ 0/0:1597:1:57 chrM 14184 . A . . PASS END=14212;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1289:99:56 chrM 14213 . C T 37110.10 PASS BaseQRankSum=-0.291;DP=1317;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=68.5438;MQ=57;MQ0=33;MQRankSum=0.618;QD=28.18;ReadPosRankSum=1.708;SB=-24431.16 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:1,1313:1317:99:37110,2649,0:57:99:0.999 chrM 14214 . A . . PASS END=14362;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1307:99:56 chrM 14363 . C T 1101.47 LowVariantFreq BaseQRankSum=-0.270;DP=1521;Dels=0.00;FS=3.551;HRun=0;HaplotypeScore=130.5324;MQ=59;MQ0=1;MQRankSum=-0.541;QD=0.72;ReadPosRankSum=-14.984;SB=-680.20 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1353,168:1521:99:1131,0,33569:59:99:0.110 chrM 14364 . A . . PASS . GT:DP:GQX:MQ 0/0:1505:99:59 chrM 14365 . G A 1038.81 LowVariantFreq BaseQRankSum=-2.189;DP=1555;Dels=0.00;FS=5.730;HRun=1;HaplotypeScore=131.3794;MQ=59;MQ0=1;MQRankSum=-1.311;QD=0.67;ReadPosRankSum=-15.549;SB=-712.18 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1388,163:1555:99:1069,0,32733:59:99:0.105 chrM 14366 . C . . PASS END=14473;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1241:99:58 chrM 14474 . A . . PASS END=14524;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:969:99:58 chrM 14525 . A G 232.62 LowVariantFreq BaseQRankSum=-1.818;DP=1243;Dels=0.00;FS=9.297;HRun=0;HaplotypeScore=123.9053;MQ=58;MQ0=2;MQRankSum=3.955;QD=0.19;ReadPosRankSum=-9.469;SB=-0.01 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1124,116:1243:99:263,0,27844:58:99:0.094 chrM 14526 . T . . PASS END=14557;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1044:99:56 chrM 14558 . C . . PASS END=14560;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1426:99:55 chrM 14561 . G A 1447.77 LowVariantFreq BaseQRankSum=-3.960;DP=1428;Dels=0.00;FS=36.420;HRun=1;HaplotypeScore=188.8122;MQ=55;MQ0=6;MQRankSum=-16.432;QD=1.01;ReadPosRankSum=-11.477;SB=-0.01 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1250,174:1428:99:1478,0,27965:55:99:0.122 chrM 14562 . A . . PASS . GT:DP:GQX:MQ 0/0:1423:99:55 chrM 14563 . C T 1542.08 LowVariantFreq BaseQRankSum=0.427;DP=1421;Dels=0.00;FS=41.139;HRun=0;HaplotypeScore=176.4046;MQ=55;MQ0=5;MQRankSum=-16.950;QD=1.09;ReadPosRankSum=-14.195;SB=-0.01 GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1249,168:1421:99:1572,0,27937:55:99:0.119 chrM 14564 . C . . PASS END=14569;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1175:99:55 chrM 14570 . G . . PASS . GT:DP:GQX:MQ 0/0:1181:19:56 chrM 14571 . C . . PASS END=14580;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1164:99:56 chrM 14581 . G A 31240.17 PASS BaseQRankSum=1.543;DP=1181;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=86.9064;MQ=56;MQ0=6;MQRankSum=-0.284;QD=26.45;ReadPosRankSum=0.869;SB=-18942.73 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:1,1177:1181:99:31240,2246,0:56:99:0.999 chrM 14582 . T . . PASS END=14674;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1095:99:55 chrM 14747 . A . . PASS END=14766;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1042:99:59 chrM 14767 . T C 27497.15 PASS BaseQRankSum=3.283;DP=1139;Dels=0.00;FS=5.533;HRun=0;HaplotypeScore=132.1297;MQ=59;MQ0=14;MQRankSum=4.353;QD=24.14;ReadPosRankSum=8.979;SB=-16161.80 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:71,1068:1139:99:27497,678,0:59:99:0.938 chrM 14768 . T . . PASS END=14901;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1014:99:58 chrM 14902 . C . . PASS END=14905;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1235:99:58 chrM 14906 . A G 28487.55 PASS BaseQRankSum=0.659;DP=1260;Dels=0.00;FS=2.370;HRun=0;HaplotypeScore=79.7880;MQ=58;MQ0=27;MQRankSum=6.731;QD=22.61;ReadPosRankSum=7.636;SB=-17919.94 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:110,1143:1260:99:28488,272,0:58:99:0.912 chrM 14907 . C . . PASS END=14959;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1038:99:58 chrM 14960 . A . . PASS END=15112;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:881:99:59 chrM 15113 . A . . PASS END=15301;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1086:99:60 chrM 15302 . A G 31878.69 PASS BaseQRankSum=2.346;DP=1092;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=67.5945;MQ=60;MQ0=0;MQRankSum=1.428;QD=29.19;ReadPosRankSum=1.232;SB=-19141.91 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:2,1087:1092:99:31879,2329,0:60:99:0.998 chrM 15303 . C . . PASS END=15519;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:914:99:59 chrM 15520 . T . . PASS END=15629;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:854:99:59 chrM 15630 . T . . PASS END=15828;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:878:99:60 chrM 15829 . C . . PASS END=15888;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:821:99:60 chr1 12099 . A . . LowGQX END=12259 GT ./. chr1 12554 . A . . LowGQX END=12722 GT ./. chr1 13332 . A . . LowGQX END=13702 GT ./. chr1 30335 . T . . LowGQX END=30504 GT ./. chr1 35046 . G . . LowGQX END=35545 GT ./. chr1 35619 . G . . LowGQX END=35779 GT ./. chr1 69078 . A . . LowGQX END=70018 GT ./. chr1 324295 . C . . LowGQX END=324395 GT ./. chr1 324428 . T . . LowGQX END=325606 GT ./. chr1 327735 . G . . LowGQX END=328215 GT ./. chr1 367646 . G . . LowGQX END=368606 GT ./. chr1 621093 . C . . LowGQX END=622043 GT ./. chr1 664485 . C . . LowGQX END=665109 GT ./. chr1 721405 . G . . LowGQX END=721919 GT ./. chr1 762080 . C . . LowGQX END=762572 GT ./. chr1 861308 . G . . LowGQX END=861408 GT ./. chr1 865533 . A . . LowGQX END=865719 GT ./. chr1 866395 . G . . LowGQX END=866495 GT ./. chr1 871150 . A . . LowGQX END=871279 GT ./. chr1 874415 . C . . LowGQX END=874515 GT ./. chr1 874653 . A . . LowGQX END=874843 GT ./. chr1 876492 . C . . LowGQX END=876689 GT ./. chr1 877473 . A . . LowGQX END=877684 GT ./. chr1 877727 . T . . LowGQX END=877880 GT ./. chr1 877937 . A . . LowGQX END=878441 GT ./. chr1 878590 . G . . LowGQX END=878760 GT ./. chr1 879076 . A . . LowGQX END=879536 GT ./. chr1 880018 . G . . LowGQX END=880183 GT ./. chr1 880422 . C . . LowGQX END=880529 GT ./. chr1 880896 . A . . LowGQX END=881036 GT ./. chr1 881551 . A . . LowGQX END=881669 GT ./. chr1 881780 . A . . LowGQX END=881928 GT ./. chr1 883509 . A . . LowGQX END=883615 GT ./. chr1 883868 . A . . LowGQX END=883986 GT ./. chr1 886505 . A . . LowGQX END=886621 GT ./. chr1 887378 . A . . LowGQX END=887522 GT ./. chr1 887790 . A . . LowGQX END=887983 GT ./. chr1 888553 . A . . LowGQX END=888671 GT ./. chr1 889160 . A . . LowGQX END=889275 GT ./. chr1 889382 . A . . LowGQX END=889552 GT ./. chr1 891299 . T . . LowGQX END=891399 GT ./. chr1 891473 . A . . LowGQX END=891598 GT ./. chr1 892272 . A . . LowGQX END=892408 GT ./. chr1 892477 . A . . LowGQX END=892656 GT ./. chr1 894011 . T . . LowGQX END=894464 GT ./. chr1 894558 . C . . LowGQX END=894658 GT ./. chr1 896021 . C . . LowGQX END=896183 GT ./. chr1 896601 . G . . LowGQX END=896941 GT ./. chr1 897007 . A . . LowGQX END=897133 GT ./. chr1 897204 . A . . LowGQX END=897653 GT ./. chr1 897733 . A . . LowGQX END=897854 GT ./. chr1 898082 . A . . LowGQX END=898300 GT ./. chr1 898412 . G . . LowGQX END=898693 GT ./. chr1 898715 . A . . LowGQX END=898887 GT ./. chr1 899295 . C . . LowGQX END=899395 GT ./. chr1 899474 . T . . LowGQX END=899574 GT ./. chr1 899707 . C . . LowGQX END=899913 GT ./. chr1 900341 . A . . LowGQX END=900574 GT ./. chr1 901904 . C . . LowGQX END=902004 GT ./. chr1 902082 . A . . LowGQX END=902186 GT ./. chr1 905655 . A . . LowGQX END=905806 GT ./. chr1 905832 . A . . LowGQX END=905992 GT ./. chr1 906064 . A . . LowGQX END=906389 GT ./. chr1 906416 . C . . LowGQX END=906591 GT ./. chr1 906695 . C . . LowGQX END=906795 GT ./. chr1 907443 . T . . LowGQX END=907543 GT ./. chr1 907666 . A . . LowGQX END=907807 GT ./. chr1 908239 . A . . LowGQX END=908393 GT ./. chr1 908564 . A . . LowGQX END=908709 GT ./. chr1 908878 . A . . LowGQX END=909023 GT ./. chr1 909211 . A . . LowGQX END=909434 GT ./. chr1 909671 . T . . LowGQX END=909771 GT ./. chr1 909820 . A . . LowGQX END=909958 GT ./. chr1 911500 . G . . LowGQX END=911651 GT ./. chr1 911878 . C . . LowGQX END=912005 GT ./. chr1 914255 . A . . LowGQX END=916038 GT ./. chr1 916426 . C . . LowGQX END=916585 GT ./. chr1 917421 . A . . LowGQX END=917521 GT ./. chr1 934426 . C . . LowGQX END=934815 GT ./. chr1 934834 . A . . LowGQX END=935053 GT ./. chr1 935060 . C . . LowGQX END=935400 GT ./. chr1 948846 . T . . LowGQX END=949006 GT ./. chr1 949362 . A . . LowGQX END=949861 GT ./. chr1 955442 . C . . LowGQX END=955862 GT ./. chr1 957530 . G . . LowGQX END=957894 GT ./. chr1 970606 . A . . LowGQX END=970756 GT ./. chr1 975994 . C . . LowGQX END=976312 GT ./. chr1 976502 . C . . LowGQX END=977134 GT ./. chr1 977285 . G . . LowGQX END=977594 GT ./. chr1 978568 . T . . LowGQX END=979871 GT ./. chr1 980490 . G . . LowGQX END=980955 GT ./. chr1 981062 . G . . LowGQX END=981697 GT ./. chr1 981726 . C . . LowGQX END=982389 GT ./. chr1 982656 . C . . LowGQX END=982886 GT ./. chr1 982902 . G . . LowGQX END=983327 GT ./. chr1 983341 . C . . LowGQX END=983797 GT ./. chr1 984196 . T . . LowGQX END=984491 GT ./. chr1 984565 . G . . LowGQX END=984883 GT ./. chr1 984895 . G . . LowGQX END=985227 GT ./. chr1 985232 . C . . LowGQX END=985469 GT ./. chr1 985562 . T . . LowGQX END=986023 GT ./. chr1 986055 . T . . LowGQX END=986269 GT ./. chr1 986368 . T . . LowGQX END=986468 GT ./. chr1 986582 . G . . LowGQX END=987247 GT ./. chr1 987335 . T . . LowGQX END=987435 GT ./. chr1 988807 . T . . LowGQX END=988907 GT ./. chr1 989082 . C . . LowGQX END=989409 GT ./. chr1 989777 . A . . LowGQX END=989983 GT ./. chr1 990153 . C . . LowGQX END=990413 GT ./. chr1 1007185 . A . . LowGQX END=1007955 GT ./. chr1 1018210 . C . . LowGQX END=1018241;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1018242 . C . . LowGQX END=1018272 GT ./. chr1 1018273 . T . . LowGQX END=1018294;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1018295 . T . . LowGQX . GT ./. chr1 1018296 . C . . LowGQX END=1018370;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1019286 . G . . LowGQX END=1019315;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1019316 . C . . LowGQX . GT ./. chr1 1019317 . T . . LowGQX END=1019359;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1019360 . C . . LowGQX . GT ./. chr1 1019361 . G . . LowGQX END=1019369;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1019370 . C . . LowGQX . GT ./. chr1 1019371 . T . . LowGQX END=1019422;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1019423 . T . . LowGQX END=1019742 GT ./. chr1 1019743 . T . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 1019744 . G . . LowGQX END=1019747 GT ./. chr1 1019748 . G . . LowGQX END=1019749;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1019750 . G . . LowGQX END=1019751 GT ./. chr1 1019752 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 1019753 . A . . LowGQX END=1019754 GT ./. chr1 1019755 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 1019756 . A . . LowGQX . GT ./. chr1 1019757 . T . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 1019758 . T . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 1019759 . G . . LowGQX END=1019760;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1019761 . A . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 1019762 . G . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 1019763 . C . . LowGQX END=1019764;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1019810 . A . 33 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 1019811 . C . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 1019812 . A . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 1019813 . G . . LowGQX END=1019819;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1019820 . G . . LowGQX . GT ./. chr1 1019821 . C . . LowGQX END=1019823;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1019824 . C . 33 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 1019825 . C . . LowGQX END=1019829;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1019830 . A . 33 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 1019831 . C . . LowGQX END=1019842;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1019843 . A . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 1019844 . T . . LowGQX END=1019848;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1019849 . T . . LowGQX . GT ./. chr1 1019850 . G . . LowGQX END=1019854;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1019855 . A . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 1019856 . C . . LowGQX END=1019865;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1019866 . C . . LowGQX . GT ./. chr1 1019867 . G . . LowGQX END=1019870;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1019871 . G . . LowGQX END=1019872 GT ./. chr1 1019873 . C . . LowGQX END=1019874;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1019875 . G . . LowGQX . GT ./. chr1 1019876 . C . . LowGQX END=1019881;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1019882 . C . . LowGQX . GT ./. chr1 1019883 . G . . LowGQX END=1019900;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1019901 . G . . LowGQX . GT ./. chr1 1019902 . C . . LowGQX END=1019908;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1019909 . T . . LowGQX END=1019963 GT ./. chr1 1020551 . C . . LowGQX END=1020687 GT ./. chr1 1020688 . G . . LowGQX END=1020711;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1021257 . C . . LowGQX END=1021393 GT ./. chr1 1022442 . T . . LowGQX END=1022602 GT ./. chr1 1022877 . C . . LowGQX END=1022978 GT ./. chr1 1025721 . A . . LowGQX END=1025821 GT ./. chr1 1026200 . G . . LowGQX END=1026364 GT ./. chr1 1026657 . C . . LowGQX END=1026757 GT ./. chr1 1026838 . A . . LowGQX END=1026986 GT ./. chr1 1027336 . G . . LowGQX END=1027436 GT ./. chr1 1078123 . A . . LowGQX END=1078537 GT ./. chr1 1102482 . A . . LowGQX END=1102582 GT ./. chr1 1103178 . C . . LowGQX END=1103198;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1103199 . T . . LowGQX END=1103338 GT ./. chr1 1104324 . G . . LowGQX END=1104477 GT ./. chr1 1111010 . T . . LowGQX END=1111777 GT ./. chr1 1114595 . A . . LowGQX END=1114842 GT ./. chr1 1114975 . T . . LowGQX END=1115127 GT ./. chr1 1115413 . G . . LowGQX END=1115723 GT ./. chr1 1115861 . A . . LowGQX END=1115984 GT ./. chr1 1116109 . A . . LowGQX END=1116243 GT ./. chr1 1117109 . C . . LowGQX END=1117209 GT ./. chr1 1117734 . C . . LowGQX END=1117834 GT ./. chr1 1118254 . A . . LowGQX END=1118430 GT ./. chr1 1119298 . A . . LowGQX END=1119474 GT ./. chr1 1120327 . T . . LowGQX END=1120525 GT ./. chr1 1131979 . G . . LowGQX END=1132097 GT ./. chr1 1132470 . C . . LowGQX END=1132570 GT ./. chr1 1132806 . C . . LowGQX END=1133228 GT ./. chr1 1138969 . T . . LowGQX END=1139351 GT ./. chr1 1139412 . A . . LowGQX END=1139619 GT ./. chr1 1139773 . A . . LowGQX END=1139873 GT ./. chr1 1140698 . C . . LowGQX END=1140875 GT ./. chr1 1141743 . T . . LowGQX END=1141954 GT ./. chr1 1146923 . G . . LowGQX END=1147263 GT ./. chr1 1147309 . C . . LowGQX END=1147580 GT ./. chr1 1147942 . G . . LowGQX END=1148156 GT ./. chr1 1148359 . C . . LowGQX END=1148879 GT ./. chr1 1149041 . A . . LowGQX END=1149168 GT ./. chr1 1149361 . A . . LowGQX END=1149510 GT ./. chr1 1152890 . G . . LowGQX END=1153187 GT ./. chr1 1153836 . A . . LowGQX END=1154016 GT ./. chr1 1154076 . C . . LowGQX END=1154446 GT ./. chr1 1156045 . A . . LowGQX END=1156145 GT ./. chr1 1158550 . T . . LowGQX END=1158740 GT ./. chr1 1159210 . A . . LowGQX END=1159351 GT ./. chr1 1163846 . A . . LowGQX END=1164176 GT ./. chr1 1167646 . C . . LowGQX END=1168651 GT ./. chr1 1177926 . C . . LowGQX END=1178029 GT ./. chr1 1178205 . C . . LowGQX END=1178305 GT ./. chr1 1178438 . T . . LowGQX END=1178538 GT ./. chr1 1178822 . A . . LowGQX END=1178935 GT ./. chr1 1179311 . T . . LowGQX END=1179488 GT ./. chr1 1179564 . G . . LowGQX END=1179664 GT ./. chr1 1179759 . A . . LowGQX END=1179880 GT ./. chr1 1181881 . C . . LowGQX END=1182073 GT ./. chr1 1190581 . C . . LowGQX END=1190870 GT ./. chr1 1191416 . C . . LowGQX END=1191516 GT ./. chr1 1192370 . A . . LowGQX END=1192513 GT ./. chr1 1192586 . A . . LowGQX END=1192693 GT ./. chr1 1197643 . T . . LowGQX END=1197771 GT ./. chr1 1198697 . T . . LowGQX END=1198797 GT ./. chr1 1200137 . A . . LowGQX END=1200237 GT ./. chr1 1201441 . G . . LowGQX END=1201541 GT ./. chr1 1203240 . A . . LowGQX END=1203375 GT ./. chr1 1215994 . G . . LowGQX END=1216094 GT ./. chr1 1216592 . C . . LowGQX END=1216692 GT ./. chr1 1216790 . G . . LowGQX END=1216996 GT ./. chr1 1217611 . G . . LowGQX END=1217711 GT ./. chr1 1219297 . C . . LowGQX END=1219516 GT ./. chr1 1220948 . T . . LowGQX END=1221048 GT ./. chr1 1221304 . A . . LowGQX END=1221661 GT ./. chr1 1222146 . A . . LowGQX END=1222358 GT ./. chr1 1222487 . A . . LowGQX END=1222682 GT ./. chr1 1222886 . A . . LowGQX END=1223219 GT ./. chr1 1223259 . C . . LowGQX END=1223420 GT ./. chr1 1225649 . A . . LowGQX END=1225771 GT ./. chr1 1225847 . C . . LowGQX END=1225947 GT ./. chr1 1225996 . A . . LowGQX END=1226096 GT ./. chr1 1226255 . A . . LowGQX END=1226355 GT ./. chr1 1226433 . A . . LowGQX END=1226533 GT ./. chr1 1226632 . A . . LowGQX END=1226993 GT ./. chr1 1228911 . G . . LowGQX END=1229091 GT ./. chr1 1229149 . C . . LowGQX END=1229316 GT ./. chr1 1229468 . A . . LowGQX END=1229582 GT ./. chr1 1229750 . T . . LowGQX END=1230011 GT ./. chr1 1230097 . C . . LowGQX END=1230197 GT ./. chr1 1230825 . A . . LowGQX END=1230937 GT ./. chr1 1231114 . A . . LowGQX END=1231321 GT ./. chr1 1231393 . A . . LowGQX END=1231493 GT ./. chr1 1231576 . G . . LowGQX END=1231676 GT ./. chr1 1231803 . A . . LowGQX END=1232016 GT ./. chr1 1233200 . A . . LowGQX END=1233316 GT ./. chr1 1233391 . A . . LowGQX END=1233496 GT ./. chr1 1233666 . T . . LowGQX END=1233826 GT ./. chr1 1233894 . A . . LowGQX END=1234105 GT ./. chr1 1234621 . A . . LowGQX END=1234781 GT ./. chr1 1235055 . T . . LowGQX END=1235288 GT ./. chr1 1235351 . A . . LowGQX END=1235451 GT ./. chr1 1235511 . G . . LowGQX END=1235611 GT ./. chr1 1235876 . T . . LowGQX END=1236087 GT ./. chr1 1237296 . C . . LowGQX END=1237448 GT ./. chr1 1238219 . C . . LowGQX END=1238379 GT ./. chr1 1238540 . A . . LowGQX END=1238662 GT ./. chr1 1239445 . C . . LowGQX END=1239545 GT ./. chr1 1242445 . T . . LowGQX END=1242545 GT ./. chr1 1242691 . C . . LowGQX END=1242791 GT ./. chr1 1243062 . C . . LowGQX END=1243222 GT ./. chr1 1243953 . A . . LowGQX END=1244113 GT ./. chr1 1244214 . G . . LowGQX END=1244374 GT ./. chr1 1244453 . C . . LowGQX END=1244656 GT ./. chr1 1244832 . A . . LowGQX END=1244986 GT ./. chr1 1245059 . A . . LowGQX END=1245234 GT ./. chr1 1245967 . A . . LowGQX END=1246454 GT ./. chr1 1246708 . A . . LowGQX END=1247041 GT ./. chr1 1247167 . G . . LowGQX END=1247322 GT ./. chr1 1247356 . G . . LowGQX END=1247530 GT ./. chr1 1247604 . A . . LowGQX END=1247751 GT ./. chr1 1247801 . A . . LowGQX END=1247901 GT ./. chr1 1247971 . A . . LowGQX END=1248083 GT ./. chr1 1248165 . A . . LowGQX END=1248332 GT ./. chr1 1248410 . C . . LowGQX END=1248510 GT ./. chr1 1248881 . G . . LowGQX END=1248981 GT ./. chr1 1249110 . A . . LowGQX END=1249304 GT ./. chr1 1249604 . G . . LowGQX END=1249764 GT ./. chr1 1250202 . A . . LowGQX END=1250345 GT ./. chr1 1250752 . C . . LowGQX END=1250852 GT ./. chr1 1250898 . A . . LowGQX END=1251001 GT ./. chr1 1254235 . T . . LowGQX END=1254679 GT ./. chr1 1254680 . A . . LowGQX . GT:DP:GQX:MQ 0/0:2:3:60 chr1 1254681 . C . . LowGQX . GT ./. chr1 1254682 . C . . LowGQX END=1254692;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1254693 . G . . LowGQX . GT ./. chr1 1254694 . G . . LowGQX END=1254700;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1254701 . G . . LowGQX . GT ./. chr1 1254702 . C . . LowGQX END=1254705;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1254706 . C . . LowGQX . GT ./. chr1 1254707 . A . . LowGQX END=1254811;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1254812 . G . . PASS END=1254822;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:7:12:60 chr1 1254823 . G A 4.59 LowGQX BaseQRankSum=0.198;DP=7;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;MQ=60;MQ0=0;MQRankSum=-1.495;QD=0.66;ReadPosRankSum=-1.495;SB=-25.77;TI=NM_017871;GI=CPSF3L;FC=Synonymous_H94H;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:5,2:7:32.73:33,0,112:60:5:0.286 chr1 1254824 . T . . PASS END=1254839;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:7:12:60 chr1 1254840 . G . . LowGQX . GT:DP:GQX:MQ 0/0:7:9:60 chr1 1254841 rs10907179 C G 102.28 LowGQX;LowGQ DP=7;Dels=0.00;FS=0.000;HRun=3;HaplotypeScore=0.0000;MQ=60;MQ0=0;QD=14.61;SB=-120.61;TI=NM_017871;GI=CPSF3L;FC=Synonymous_G88G;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,7:7:9.03:134,9,0:60:9:1.000 chr1 1254842 . C . . LowGQX END=1254843;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:7:9:60 chr1 1254844 . G . . PASS END=1254866;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:7:12:60 chr1 1254867 . A . . LowGQX . GT:DP:GQX:MQ 0/0:7:9:60 chr1 1254868 . G . . PASS END=1254907;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:7:12:60 chr1 1255823 . A . . PASS END=1255839;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:8:15:60 chr1 1255840 . T . . PASS END=1255883;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:10:21:60 chr1 1255884 . A . . PASS END=1255923;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:13:24:60 chr1 1255992 . C . . LowGQX END=1256008;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1256009 . T . 33 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 1256010 . G . . LowGQX END=1256016;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1256017 . C . . LowGQX END=1256018 GT ./. chr1 1256019 . C . . LowGQX END=1256022;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1256023 . C . . LowGQX END=1256024 GT ./. chr1 1256025 . G . . LowGQX END=1256026;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1256027 . G . . LowGQX END=1256028 GT ./. chr1 1256029 . A . . LowGQX END=1256030;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1256031 . T . . LowGQX END=1256037 GT ./. chr1 1256038 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 1256039 . C . . LowGQX . GT ./. chr1 1256040 . G . . LowGQX END=1256046;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1256047 . G . . LowGQX . GT ./. chr1 1256048 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 1256049 . A . . LowGQX END=1256051 GT ./. chr1 1256052 . A . . LowGQX END=1256056;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1256057 . C . . LowGQX . GT ./. chr1 1256058 . C . . LowGQX END=1256062;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1256063 . C . . LowGQX END=1256064 GT ./. chr1 1256065 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 1256066 . C . . LowGQX . GT ./. chr1 1256067 . T . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 1256068 . C . . LowGQX . GT ./. chr1 1256069 . A . . LowGQX END=1256076;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1256077 . C . . LowGQX . GT ./. chr1 1256078 . G . . LowGQX END=1256080;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1256081 . G . . LowGQX END=1256092 GT ./. chr1 1256178 . T . . LowGQX END=1256180 GT ./. chr1 1256181 . G . . LowGQX END=1256216;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1256217 . A . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 1256218 . C . . LowGQX END=1256221;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1256222 . G . . LowGQX . GT ./. chr1 1256223 . G . . LowGQX END=1256245;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1256246 . C . . LowGQX END=1256477 GT ./. chr1 1257276 . A . . LowGQX END=1257376 GT ./. chr1 1258510 . C . . LowGQX END=1258668 GT ./. chr1 1259889 . A . . LowGQX END=1260042 GT ./. chr1 1262289 . A . . LowGQX END=1262415 GT ./. chr1 1262609 . T . . LowGQX END=1263149 GT ./. chr1 1266713 . A . . LowGQX END=1266934 GT ./. chr1 1267016 . A . . LowGQX END=1267321 GT ./. chr1 1267393 . G . . LowGQX END=1268189 GT ./. chr1 1268299 . A . . LowGQX END=1268507 GT ./. chr1 1268596 . G . . LowGQX END=1268762 GT ./. chr1 1268884 . A . . LowGQX END=1269847 GT ./. chr1 1271509 . C . . LowGQX END=1271898 GT ./. chr1 1273112 . T . . LowGQX END=1273566 GT ./. chr1 1273647 . A . . LowGQX END=1273819 GT ./. chr1 1273900 . A . . LowGQX END=1274036 GT ./. chr1 1274655 . G . . LowGQX END=1275065 GT ./. chr1 1275105 . C . . LowGQX END=1275205 GT ./. chr1 1275416 . A . . LowGQX END=1275560 GT ./. chr1 1275612 . G . . LowGQX END=1275712 GT ./. chr1 1275787 . T . . LowGQX END=1275887 GT ./. chr1 1277045 . A . . LowGQX END=1277188 GT ./. chr1 1277431 . A . . LowGQX END=1277539 GT ./. chr1 1277741 . A . . LowGQX END=1277867 GT ./. chr1 1278054 . G . . LowGQX END=1278154 GT ./. chr1 1284254 . G . . LowGQX END=1284474 GT ./. chr1 1288590 . C . . LowGQX END=1288747 GT ./. chr1 1288947 . G . . LowGQX END=1289047 GT ./. chr1 1289226 . A . . LowGQX END=1289327 GT ./. chr1 1289399 . C . . LowGQX END=1289499 GT ./. chr1 1289543 . C . . LowGQX END=1289643 GT ./. chr1 1289702 . T . . LowGQX END=1289892 GT ./. chr1 1290060 . A . . LowGQX END=1290535 GT ./. chr1 1290565 . C . . LowGQX END=1290782 GT ./. chr1 1290817 . C . . LowGQX END=1291135 GT ./. chr1 1291963 . G . . LowGQX END=1292123 GT ./. chr1 1293811 . C . . LowGQX END=1293911 GT ./. chr1 1296583 . C . . LowGQX END=1296683 GT ./. chr1 1309179 . A . . LowGQX END=1309339 GT ./. chr1 1309378 . A . . LowGQX END=1309828 GT ./. chr1 1310001 . C . . LowGQX END=1310161 GT ./. chr1 1322609 . C . . LowGQX END=1322965 GT ./. chr1 1323154 . C . . LowGQX END=1323254 GT ./. chr1 1323332 . A . . LowGQX END=1323448 GT ./. chr1 1323831 . G . . LowGQX END=1323931 GT ./. chr1 1324005 . C . . LowGQX END=1324124 GT ./. chr1 1324153 . A . . LowGQX END=1324253 GT ./. chr1 1325608 . A . . LowGQX END=1325754 GT ./. chr1 1325837 . A . . LowGQX END=1325946 GT ./. chr1 1326144 . A . . LowGQX END=1326248 GT ./. chr1 1326889 . A . . LowGQX END=1326989 GT ./. chr1 1328123 . C . . LowGQX END=1328223 GT ./. chr1 1328759 . A . . LowGQX END=1328859 GT ./. chr1 1330772 . A . . LowGQX END=1330897 GT ./. chr1 1333611 . A . . LowGQX END=1333725 GT ./. chr1 1333965 . A . . LowGQX END=1334065 GT ./. chr1 1334368 . C . . LowGQX END=1334689 GT ./. chr1 1334892 . G . . LowGQX END=1335070 GT ./. chr1 1335538 . G . . LowGQX END=1335684 GT ./. chr1 1335985 . G . . LowGQX END=1336115 GT ./. chr1 1337461 . C . . LowGQX END=1337639 GT ./. chr1 1340997 . T . . LowGQX END=1341269 GT ./. chr1 1342287 . A . . LowGQX END=1342402 GT ./. chr1 1342505 . A . . LowGQX END=1342605 GT ./. chr1 1354479 . C . . LowGQX END=1354930 GT ./. chr1 1355420 . G . . LowGQX END=1355554 GT ./. chr1 1355555 . C . . LowGQX . GT:DP:GQX:MQ 0/0:2:3:46 chr1 1355556 . A . . LowGQX . GT ./. chr1 1355557 . C . . LowGQX END=1355574;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:46 chr1 1355575 . G . . LowGQX END=1355980 GT ./. chr1 1356176 . C . . LowGQX END=1356386 GT ./. chr1 1361482 . G . . LowGQX END=1361766 GT ./. chr1 1362862 . C . . LowGQX END=1363232 GT ./. chr1 1371056 . G . . LowGQX END=1371216 GT ./. chr1 1372305 . A . . LowGQX END=1372867 GT ./. chr1 1374459 . A . . LowGQX END=1375173 GT ./. chr1 1386051 . G . . LowGQX END=1386151 GT ./. chr1 1387414 . G . . LowGQX END=1387514 GT ./. chr1 1387730 . C . . LowGQX END=1387830 GT ./. chr1 1389724 . G . . LowGQX END=1389881 GT ./. chr1 1390820 . T . . LowGQX END=1390920 GT ./. chr1 1391170 . G . . LowGQX END=1391297 GT ./. chr1 1391563 . G . . LowGQX END=1391730 GT ./. chr1 1392485 . G . . LowGQX END=1392585 GT ./. chr1 1394526 . A . . LowGQX END=1394626 GT ./. chr1 1396129 . G . . LowGQX END=1396298 GT ./. chr1 1397979 . G . . LowGQX END=1398073 GT ./. chr1 1398074 . G . . LowGQX END=1398075;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1398076 . C . . LowGQX . GT ./. chr1 1398077 . G . . LowGQX END=1398084;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 1398085 . G . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 1398086 . C . . LowGQX . GT ./. chr1 1398087 . A . . LowGQX END=1398089;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 1403763 . G . . LowGQX END=1404103 GT ./. chr1 1407192 . G . . LowGQX END=1407532 GT ./. chr1 1412643 . T . . LowGQX END=1412743 GT ./. chr1 1413880 . A . . LowGQX END=1414128 GT ./. chr1 1414409 . G . . LowGQX END=1414414 GT ./. chr1 1414415 . C . . LowGQX END=1414462;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:3:10 chr1 1414463 . G . . LowGQX . GT ./. chr1 1414464 . C . . LowGQX END=1414509;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:3:11 chr1 1416232 . G . . LowGQX END=1416332 GT ./. chr1 1417516 . A . . LowGQX END=1417686 GT ./. chr1 1417923 . A . . LowGQX END=1418100 GT ./. chr1 1418347 . C . . LowGQX END=1418507 GT ./. chr1 1420394 . A . . LowGQX END=1420554 GT ./. chr1 1421142 . T . . LowGQX END=1421242 GT ./. chr1 1421488 . A . . LowGQX END=1421618 GT ./. chr1 1421922 . A . . LowGQX END=1422051 GT ./. chr1 1423219 . G . . LowGQX END=1423319 GT ./. chr1 1424567 . G . . LowGQX END=1424667 GT ./. chr1 1425633 . A . . LowGQX END=1425807 GT ./. chr1 1425849 . G . . LowGQX END=1426054 GT ./. chr1 1430863 . A . . LowGQX END=1431200 GT ./. chr1 1444585 . G . . LowGQX END=1444690 GT ./. chr1 1447576 . G . . LowGQX END=1448071 GT ./. chr1 1451381 . T . . LowGQX END=1451480 GT ./. chr1 1451481 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:56 chr1 1452545 . A . . PASS END=1452549;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:12:30:60 chr1 1452550 . C . . PASS END=1452576;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:11:27:60 chr1 1452577 . A . . PASS END=1452595;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:9:21:60 chr1 1452596 . G . . PASS END=1452604;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:13:21:57 chr1 1452605 . G . . PASS END=1452616;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:14:27:55 chr1 1452617 . T . . PASS END=1452622;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:19:30:49 chr1 1452623 . C . . PASS END=1452629;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:19:27:49 chr1 1452630 . G . . PASS END=1452635;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:18:24:48 chr1 1452636 . G . . PASS END=1452638;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:18:21:48 chr1 1452639 . A . . PASS END=1452642;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:18:27:48 chr1 1452643 . A . . PASS END=1452645;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:17:21:42 chr1 1452646 . G . . PASS END=1452647;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:19:18:42 chr1 1452648 . C . . PASS END=1452653;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:18:21:41 chr1 1452654 . T . . PASS END=1452682;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:16:18:37 chr1 1452683 . C . . PASS END=1452695;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:15:15:31 chr1 1452696 . T . . PASS END=1452703;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:11:12:33 chr1 1452704 . C . . LowGQX . GT:DP:GQX:MQ 0/0:12:6:34 chr1 1452705 . C . . PASS END=1452711;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:12:12:34 chr1 1452712 . C . . PASS . GT:DP:GQX:MQ 0/0:13:18:35 chr1 1452713 . A . . LowGQX . GT:DP:GQX:MQ 0/0:11:9:32 chr1 1452714 . G . . PASS END=1452729;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:11:12:26 chr1 1452730 . A . . PASS END=1452736;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:15:12:25 chr1 1452737 . C . . LowGQX . GT:DP:GQX:MQ 0/0:15:9:25 chr1 1452738 . G . . PASS END=1452759;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:13:12:23 chr1 1452760 . A . . LowGQX . GT:DP:GQX:MQ 0/0:13:6:22 chr1 1452761 . C . . PASS . GT:DP:GQX:MQ 0/0:13:12:22 chr1 1452762 . C . . LowGQX . GT:DP:GQX:MQ 0/0:13:9:22 chr1 1452763 . C . . PASS END=1452780;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:12:12:23 chr1 1452781 . C . . PASS END=1452791;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:13:15:26 chr1 1452792 . C . . PASS END=1452795;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:12:18:29 chr1 1452995 . T . . LowGQX END=1453072 GT ./. chr1 1453073 . T . . LowGQX END=1453075;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:6:3:15 chr1 1453076 . G . . LowGQX END=1453077 GT ./. chr1 1453078 . C . . LowGQX END=1453104;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:7:3:15 chr1 1453105 . T . . LowGQX END=1453127;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:9:3:15 chr1 1453128 . G . . LowGQX END=1453162;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:12:6:20 chr1 1454286 . G . . LowGQX END=1454386 GT ./. chr1 1455519 . A . . LowGQX END=1455689 GT ./. chr1 1455913 . C . . LowGQX END=1456013 GT ./. chr1 1458122 . A . . LowGQX END=1458282 GT ./. chr1 1458870 . C . . LowGQX END=1458970 GT ./. chr1 1459217 . A . . LowGQX END=1459387 GT ./. chr1 1459651 . A . . LowGQX END=1459780 GT ./. chr1 1460596 . G . . LowGQX END=1460696 GT ./. chr1 1461827 . C . . LowGQX END=1461927 GT ./. chr1 1462469 . C . . LowGQX END=1462630 GT ./. chr1 1463073 . A . . LowGQX END=1463245 GT ./. chr1 1464601 . A . . LowGQX END=1464714 GT ./. chr1 1469304 . A . . LowGQX END=1469455 GT ./. chr1 1470738 . C . . LowGQX END=1470888 GT ./. chr1 1470968 . C . . LowGQX END=1471178 GT ./. chr1 1475007 . G . . LowGQX END=1475171 GT ./. chr1 1475588 . G . . LowGQX END=1475748 GT ./. chr1 1477444 . G . . LowGQX END=1477550 GT ./. chr1 1479195 . T . . LowGQX END=1479370 GT ./. chr1 1480117 . C . . LowGQX END=1480385 GT ./. chr1 1499914 . G . . LowGQX END=1500299 GT ./. chr1 1509788 . G . . LowGQX END=1509948 GT ./. chr1 1510356 . A . . LowGQX END=1510660 GT ./. chr1 1534714 . T . . LowGQX END=1535396 GT ./. chr1 1550819 . C . . LowGQX END=1551039 GT ./. chr1 1551886 . A . . LowGQX END=1552046 GT ./. chr1 1558756 . C . . LowGQX END=1559082 GT ./. chr1 1559152 . A . . LowGQX END=1559328 GT ./. chr1 1560119 . G . . LowGQX END=1560284 GT ./. chr1 1560369 . A . . LowGQX END=1560568 GT ./. chr1 1560664 . A . . LowGQX END=1560811 GT ./. chr1 1560924 . A . . LowGQX END=1561036 GT ./. chr1 1561973 . G . . LowGQX END=1562137 GT ./. chr1 1562215 . A . . LowGQX END=1562433 GT ./. chr1 1562452 . A . . LowGQX END=1562590 GT ./. chr1 1562644 . G . . LowGQX END=1562827 GT ./. chr1 1563030 . T . . LowGQX END=1563241 GT ./. chr1 1563397 . A . . LowGQX END=1563562 GT ./. chr1 1563651 . A . . LowGQX END=1563782 GT ./. chr1 1563867 . A . . LowGQX END=1564105 GT ./. chr1 1564485 . C . . LowGQX END=1564694 GT ./. chr1 1564743 . A . . LowGQX END=1565102 GT ./. chr1 1565670 . A . . LowGQX END=1565913 GT ./. chr1 1567575 . C . . LowGQX END=1567756 GT ./. chr1 1568018 . A . . LowGQX END=1568860 GT ./. chr1 1569114 . C . . LowGQX END=1569481 GT ./. chr1 1569579 . A . . LowGQX END=1569748 GT ./. chr1 1569814 . C . . LowGQX END=1570004 GT ./. chr1 1571122 . A . . LowGQX END=1571274 GT ./. chr1 1571287 . C . . LowGQX END=1571489 GT ./. chr1 1571694 . C . . LowGQX END=1571844 GT ./. chr1 1572043 . C . . LowGQX END=1572161 GT ./. chr1 1572258 . C . . LowGQX END=1572367 GT ./. chr1 1572442 . C . . LowGQX END=1572565 GT ./. chr1 1572769 . C . . LowGQX END=1572876 GT ./. chr1 1573123 . C . . LowGQX END=1573246 GT ./. chr1 1573800 . C . . LowGQX END=1573957 GT ./. chr1 1575626 . G . . LowGQX END=1575814 GT ./. chr1 1576392 . T . . LowGQX END=1576492 GT ./. chr1 1577001 . C . . LowGQX END=1577182 GT ./. chr1 1577205 . G . . LowGQX END=1577365 GT ./. chr1 1577637 . A . . LowGQX END=1577870 GT ./. chr1 1580456 . G . . LowGQX END=1580624 GT ./. chr1 1580643 . C . . LowGQX END=1580743 GT ./. chr1 1581420 . T . . LowGQX END=1581520 GT ./. chr1 1581770 . G . . LowGQX END=1581870 GT ./. chr1 1582086 . C . . LowGQX END=1582186 GT ./. chr1 1582265 . C . . LowGQX END=1582365 GT ./. chr1 1585557 . A . . LowGQX END=1585657 GT ./. chr1 1586813 . A . . LowGQX END=1586939 GT ./. chr1 1588825 . A . . LowGQX END=1588936 GT ./. chr1 1591519 . C . . LowGQX END=1591619 GT ./. chr1 1597186 . T . . LowGQX END=1597459 GT ./. chr1 1599765 . C . . LowGQX END=1599912 GT ./. chr1 1601102 . C . . LowGQX END=1601284 GT ./. chr1 1601512 . G . . LowGQX END=1601612 GT ./. chr1 1602944 . T . . LowGQX END=1603069 GT ./. chr1 1606901 . C . . LowGQX END=1607080 GT ./. chr1 1607451 . C . . LowGQX END=1607639 GT ./. chr1 1607805 . G . . LowGQX END=1608145 GT ./. chr1 1632408 . A . . LowGQX END=1632707 GT ./. chr1 1632800 . A . . LowGQX END=1632969 GT ./. chr1 1633047 . C . . LowGQX END=1633246 GT ./. chr1 1634342 . A . . LowGQX END=1634494 GT ./. chr1 1634507 . C . . LowGQX END=1634709 GT ./. chr1 1634914 . C . . LowGQX END=1635064 GT ./. chr1 1635262 . C . . LowGQX END=1635380 GT ./. chr1 1635477 . C . . LowGQX END=1635586 GT ./. chr1 1635661 . C . . LowGQX END=1635784 GT ./. chr1 1635921 . T . . LowGQX END=1636095 GT ./. chr1 1636241 . C . . LowGQX END=1636465 GT ./. chr1 1637019 . C . . LowGQX END=1637230 GT ./. chr1 1638847 . C . . LowGQX END=1639056 GT ./. chr1 1639602 . T . . LowGQX END=1639702 GT ./. chr1 1640211 . C . . LowGQX END=1640392 GT ./. chr1 1640415 . G . . LowGQX END=1640626 GT ./. chr1 1640846 . G . . LowGQX END=1641080 GT ./. chr1 1643702 . C . . LowGQX END=1643891 GT ./. chr1 1647784 . C . . LowGQX END=1647918 GT ./. chr1 1650716 . G . . LowGQX END=1650895 GT ./. chr1 1653034 . C . . LowGQX END=1653151 GT ./. chr1 1653921 . C . . LowGQX END=1654081 GT ./. chr1 1654092 . C . . LowGQX END=1654258 GT ./. chr1 1656807 . A . . LowGQX END=1656907 GT ./. chr1 1663822 . A . . LowGQX END=1663979 GT ./. chr1 1666127 . A . . LowGQX END=1666336 GT ./. chr1 1669758 . A . . LowGQX END=1669938 GT ./. chr1 1670308 . A . . LowGQX END=1670499 GT ./. chr1 1670662 . A . . LowGQX END=1671002 GT ./. chr1 1684341 . A . . LowGQX END=1684502 GT ./. chr1 1684998 . G . . LowGQX END=1685098 GT ./. chr1 1685467 . A . . LowGQX END=1685678 GT ./. chr1 1685691 . T . . LowGQX END=1685825 GT ./. chr1 1685981 . A . . LowGQX END=1686140 GT ./. chr1 1686811 . A . . LowGQX END=1686918 GT ./. chr1 1687690 . G . . LowGQX END=1687790 GT ./. chr1 1687940 . A . . LowGQX END=1688097 GT ./. chr1 1688250 . T . . LowGQX END=1688350 GT ./. chr1 1688545 . C . . LowGQX END=1688752 GT ./. chr1 1689803 . C . . LowGQX END=1689971 GT ./. chr1 1690539 . C . . LowGQX END=1690683 GT ./. chr1 1691172 . C . . LowGQX END=1691342 GT ./. chr1 1693383 . G . . LowGQX END=1693483 GT ./. chr1 1696665 . A . . LowGQX END=1696848 GT ./. chr1 1718768 . C . . LowGQX END=1718879 GT ./. chr1 1720490 . A . . LowGQX END=1720711 GT ./. chr1 1721832 . A . . LowGQX END=1722038 GT ./. chr1 1724668 . C . . LowGQX END=1724768 GT ./. chr1 1735827 . T . . LowGQX END=1736023 GT ./. chr1 1737896 . G . . LowGQX END=1737996 GT ./. chr1 1747193 . A . . LowGQX END=1747304 GT ./. chr1 1749246 . A . . LowGQX END=1749346 GT ./. chr1 1756815 . C . . LowGQX END=1756915 GT ./. chr1 1846684 . G . . LowGQX END=1846784 GT ./. chr1 1847100 . A . . LowGQX END=1847200 GT ./. chr1 1847878 . A . . LowGQX END=1848057 GT ./. chr1 1848189 . A . . LowGQX END=1848338 GT ./. chr1 1848411 . A . . LowGQX END=1848516 GT ./. chr1 1848560 . C . . LowGQX END=1848660 GT ./. chr1 1849319 . C . . LowGQX END=1849604 GT ./. chr1 1849690 . A . . LowGQX END=1849996 GT ./. chr1 1850243 . C . . LowGQX END=1850403 GT ./. chr1 1850411 . G . . LowGQX END=1850771 GT ./. chr1 1853673 . G . . LowGQX END=1853884 GT ./. chr1 1854026 . A . . LowGQX END=1854165 GT ./. chr1 1854422 . A . . LowGQX END=1854612 GT ./. chr1 1854804 . A . . LowGQX END=1854941 GT ./. chr1 1855191 . A . . LowGQX END=1855371 GT ./. chr1 1855828 . A . . LowGQX END=1855962 GT ./. chr1 1857220 . A . . LowGQX END=1857378 GT ./. chr1 1857667 . C . . LowGQX END=1857787 GT ./. chr1 1857874 . T . . LowGQX END=1857974 GT ./. chr1 1858091 . C . . LowGQX END=1858201 GT ./. chr1 1858333 . C . . LowGQX END=1858468 GT ./. chr1 1859046 . C . . LowGQX END=1859186 GT ./. chr1 1860223 . A . . LowGQX END=1860323 GT ./. chr1 1861499 . C . . LowGQX END=1861776 GT ./. chr1 1870294 . C . . LowGQX END=1870428 GT ./. chr1 1871033 . C . . LowGQX END=1871207 GT ./. chr1 1871689 . G . . LowGQX END=1871849 GT ./. chr1 1873467 . C . . LowGQX END=1873596 GT ./. chr1 1875770 . C . . LowGQX END=1875892 GT ./. chr1 1877756 . C . . LowGQX END=1877879 GT ./. chr1 1878412 . G . . LowGQX END=1878512 GT ./. chr1 1886576 . G . . LowGQX END=1886966 GT ./. chr1 1887015 . G . . LowGQX END=1887292 GT ./. chr1 1888057 . A . . LowGQX END=1888226 GT ./. chr1 1890554 . C . . LowGQX END=1890654 GT ./. chr1 1891370 . C . . LowGQX END=1891581 GT ./. chr1 1895186 . A . . LowGQX END=1895356 GT ./. chr1 1896305 . C . . LowGQX END=1896503 GT ./. chr1 1897808 . A . . LowGQX END=1897968 GT ./. chr1 1900072 . A . . LowGQX END=1900275 GT ./. chr1 1902096 . A . . LowGQX END=1902258 GT ./. chr1 1903417 . A . . LowGQX END=1903524 GT ./. chr1 1904324 . A . . LowGQX END=1904489 GT ./. chr1 1905462 . A . . LowGQX END=1905640 GT ./. chr1 1916821 . T . . LowGQX END=1916932 GT ./. chr1 1918374 . A . . LowGQX END=1918477 GT ./. chr1 1919518 . G . . LowGQX END=1919618 GT ./. chr1 1919949 . A . . LowGQX END=1920097 GT ./. chr1 1920266 . C . . LowGQX END=1920421 GT ./. chr1 1922313 . A . . LowGQX END=1922413 GT ./. chr1 1950787 . T . . LowGQX END=1950947 GT ./. chr1 1956379 . A . . LowGQX END=1956496 GT ./. chr1 1956757 . T . . LowGQX END=1956857 GT ./. chr1 1956955 . A . . LowGQX END=1957180 GT ./. chr1 1958953 . T . . LowGQX END=1959108 GT ./. chr1 1959592 . A . . LowGQX END=1959734 GT ./. chr1 1960518 . G . . LowGQX END=1960708 GT ./. chr1 1960988 . A . . LowGQX END=1961204 GT ./. chr1 1961409 . G . . LowGQX END=1961729 GT ./. chr1 1981996 . A . . LowGQX END=1982156 GT ./. chr1 1986878 . A . . LowGQX END=1987004 GT ./. chr1 1987918 . C . . LowGQX END=1988018 GT ./. chr1 1990956 . T . . LowGQX END=1991056 GT ./. chr1 2002719 . T . . LowGQX END=2002819 GT ./. chr1 2005654 . G . . LowGQX END=2005754 GT ./. chr1 2013760 . A . . LowGQX END=2013900 GT ./. chr1 2066694 . T . . LowGQX END=2066794 GT ./. chr1 2075647 . A . . LowGQX END=2075783 GT ./. chr1 2077457 . C . . LowGQX END=2077557 GT ./. chr1 2080288 . T . . LowGQX END=2080388 GT ./. chr1 2082227 . A . . LowGQX END=2082420 GT ./. chr1 2087432 . A . . LowGQX END=2087536 GT ./. chr1 2100439 . A . . LowGQX END=2101046 GT ./. chr1 2103492 . A . . LowGQX END=2103632 GT ./. chr1 2103674 . C . . LowGQX END=2103834 GT ./. chr1 2105334 . A . . LowGQX END=2105458 GT ./. chr1 2106183 . G . . LowGQX END=2106283 GT ./. chr1 2106658 . T . . LowGQX END=2106758 GT ./. chr1 2113235 . T . . LowGQX END=2113335 GT ./. chr1 2116020 . A . . LowGQX END=2116140 GT ./. chr1 2116355 . C . . LowGQX END=2116455 GT ./. chr1 2116716 . G . . LowGQX END=2116953 GT ./. chr1 2117442 . C . . LowGQX END=2117651 GT ./. chr1 2118573 . G . . LowGQX END=2118673 GT ./. chr1 2121135 . T . . LowGQX END=2121235 GT ./. chr1 2121490 . A . . LowGQX END=2122033 GT ./. chr1 2124296 . C . . LowGQX END=2124415 GT ./. chr1 2125006 . T . . LowGQX END=2125356 GT ./. chr1 2125435 . A . . LowGQX END=2125575 GT ./. chr1 2126048 . G . . LowGQX END=2126208 GT ./. chr1 2129445 . C . . LowGQX END=2129582 GT ./. chr1 2130192 . C . . LowGQX END=2130428 GT ./. chr1 2132463 . C . . LowGQX END=2132563 GT ./. chr1 2144365 . C . . LowGQX END=2145020 GT ./. chr1 2160155 . G . . LowGQX END=2161226 GT ./. chr1 2234366 . G . . LowGQX END=2234594 GT ./. chr1 2234673 . A . . LowGQX END=2234891 GT ./. chr1 2235228 . G . . LowGQX END=2235593 GT ./. chr1 2235681 . G . . LowGQX END=2236076 GT ./. chr1 2237408 . G . . LowGQX END=2237741 GT ./. chr1 2237965 . G . . LowGQX END=2238256 GT ./. chr1 2252809 . T . . LowGQX END=2253029 GT ./. chr1 2255510 . G . . LowGQX END=2255610 GT ./. chr1 2263979 . C . . LowGQX END=2264193 GT ./. chr1 2267898 . C . . LowGQX END=2267998 GT ./. chr1 2268154 . A . . LowGQX END=2268292 GT ./. chr1 2286845 . G . . LowGQX END=2286945 GT ./. chr1 2288869 . A . . LowGQX END=2289040 GT ./. chr1 2290029 . A . . LowGQX END=2290157 GT ./. chr1 2303193 . A . . LowGQX END=2303345 GT ./. chr1 2303918 . A . . LowGQX END=2304033 GT ./. chr1 2305898 . A . . LowGQX END=2305999 GT ./. chr1 2310360 . T . . LowGQX END=2310460 GT ./. chr1 2310501 . A . . LowGQX END=2310667 GT ./. chr1 2316415 . A . . LowGQX END=2316561 GT ./. chr1 2317242 . T . . LowGQX END=2317342 GT ./. chr1 2318856 . A . . LowGQX END=2318971 GT ./. chr1 2319676 . A . . LowGQX END=2319779 GT ./. chr1 2321350 . C . . LowGQX END=2321450 GT ./. chr1 2322834 . C . . LowGQX END=2322985 GT ./. chr1 2327221 . A . . LowGQX END=2327321 GT ./. chr1 2328553 . A . . LowGQX END=2328662 GT ./. chr1 2330852 . A . . LowGQX END=2330956 GT ./. chr1 2332286 . T . . LowGQX END=2332386 GT ./. chr1 2333535 . G . . LowGQX END=2333784 GT ./. chr1 2334472 . A . . LowGQX END=2334619 GT ./. chr1 2337094 . A . . LowGQX END=2337325 GT ./. chr1 2337872 . T . . LowGQX END=2338446 GT ./. chr1 2339840 . G . . LowGQX END=2340349 GT ./. chr1 2341759 . A . . LowGQX END=2341942 GT ./. chr1 2342201 . C . . LowGQX END=2342308 GT ./. chr1 2343779 . C . . LowGQX END=2343993 GT ./. chr1 2398970 . C . . LowGQX END=2399130 GT ./. chr1 2408027 . C . . LowGQX END=2408152 GT ./. chr1 2409914 . G . . LowGQX END=2410062 GT ./. chr1 2411172 . G . . LowGQX END=2411418 GT ./. chr1 2411620 . A . . LowGQX END=2411752 GT ./. chr1 2415886 . G . . LowGQX END=2416058 GT ./. chr1 2418343 . T . . LowGQX END=2418443 GT ./. chr1 2418611 . G . . LowGQX END=2418816 GT ./. chr1 2419036 . G . . LowGQX END=2419158 GT ./. chr1 2420645 . G . . LowGQX END=2420818 GT ./. chr1 2421198 . G . . LowGQX END=2421307 GT ./. chr1 2422630 . G . . LowGQX END=2422775 GT ./. chr1 2426231 . T . . LowGQX END=2426391 GT ./. chr1 2426858 . C . . LowGQX END=2427018 GT ./. chr1 2428045 . G . . LowGQX END=2428145 GT ./. chr1 2428266 . G . . LowGQX END=2428450 GT ./. chr1 2428940 . G . . LowGQX END=2429049 GT ./. chr1 2429911 . G . . LowGQX END=2430087 GT ./. chr1 2430175 . T . . LowGQX END=2430275 GT ./. chr1 2430522 . G . . LowGQX END=2430670 GT ./. chr1 2431070 . A . . LowGQX END=2431170 GT ./. chr1 2433550 . G . . LowGQX END=2434526 GT ./. chr1 2434951 . G . . LowGQX END=2435111 GT ./. chr1 2435360 . G . . LowGQX END=2436654 GT ./. chr1 2440284 . C . . LowGQX END=2440502 GT ./. chr1 2441286 . A . . LowGQX END=2441386 GT ./. chr1 2441494 . A . . LowGQX END=2441599 GT ./. chr1 2442115 . A . . LowGQX END=2442224 GT ./. chr1 2442752 . A . . LowGQX END=2442852 GT ./. chr1 2443045 . C . . LowGQX END=2443145 GT ./. chr1 2444295 . G . . LowGQX END=2444481 GT ./. chr1 2445435 . A . . LowGQX END=2445535 GT ./. chr1 2445791 . A . . LowGQX END=2445908 GT ./. chr1 2446752 . C . . LowGQX END=2446852 GT ./. chr1 2446999 . A . . LowGQX END=2447159 GT ./. chr1 2449601 . A . . LowGQX END=2449706 GT ./. chr1 2449946 . G . . LowGQX END=2450046 GT ./. chr1 2450580 . A . . LowGQX END=2450766 GT ./. chr1 2451238 . A . . LowGQX END=2451396 GT ./. chr1 2451758 . T . . LowGQX END=2451858 GT ./. chr1 2452149 . A . . LowGQX END=2452348 GT ./. chr1 2452538 . A . . LowGQX END=2452757 GT ./. chr1 2453052 . A . . LowGQX END=2453381 GT ./. chr1 2457851 . C . . LowGQX END=2458071 GT ./. chr1 2460905 . G . . LowGQX END=2461191 GT ./. chr1 2461283 . A . . LowGQX END=2461453 GT ./. chr1 2461527 . C . . LowGQX END=2461627 GT ./. chr1 2487651 . T . . LowGQX END=2488062 GT ./. chr1 2488089 . G . . LowGQX END=2488189 GT ./. chr1 2489163 . A . . LowGQX END=2489276 GT ./. chr1 2489780 . A . . LowGQX END=2489950 GT ./. chr1 2490319 . G . . LowGQX END=2491420 GT ./. chr1 2492060 . C . . LowGQX END=2492160 GT ./. chr1 2492932 . G . . LowGQX END=2493061 GT ./. chr1 2493110 . A . . LowGQX END=2493257 GT ./. chr1 2494210 . T . . LowGQX END=2494370 GT ./. chr1 2494585 . A . . LowGQX END=2494715 GT ./. chr1 2518213 . G . . LowGQX END=2518390 GT ./. chr1 2518488 . C . . LowGQX END=2518798 GT ./. chr1 2519096 . A . . LowGQX END=2519256 GT ./. chr1 2519774 . G . . LowGQX END=2519895 GT ./. chr1 2519968 . G . . LowGQX END=2520068 GT ./. chr1 2520359 . A . . LowGQX END=2520418 GT ./. chr1 2520419 . G . . LowGQX END=2520482;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 2520833 . C . . LowGQX END=2520835 GT ./. chr1 2520836 . G . . LowGQX END=2520930;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 2520931 . T . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 2520932 . C . . LowGQX END=2520933;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 2522369 . T . . LowGQX END=2522531 GT ./. chr1 2522985 . G . . LowGQX END=2523085 GT ./. chr1 2523369 . A . . LowGQX END=2523469 GT ./. chr1 2524077 . C . . LowGQX END=2524177 GT ./. chr1 2524270 . A . . LowGQX END=2524408 GT ./. chr1 2525251 . A . . LowGQX END=2525402 GT ./. chr1 2525804 . A . . LowGQX END=2525904 GT ./. chr1 2526227 . A . . LowGQX END=2526335 GT ./. chr1 2526652 . C . . LowGQX END=2526807 GT ./. chr1 2527446 . A . . LowGQX END=2527549 GT ./. chr1 2527998 . A . . LowGQX END=2528131 GT ./. chr1 2529643 . C . . LowGQX END=2529743 GT ./. chr1 2530091 . A . . LowGQX END=2530232 GT ./. chr1 2535318 . C . . LowGQX END=2535418 GT ./. chr1 2535584 . A . . LowGQX END=2535723 GT ./. chr1 2536980 . G . . LowGQX END=2537080 GT ./. chr1 2537685 . A . . LowGQX END=2537808 GT ./. chr1 2538411 . A . . LowGQX END=2538511 GT ./. chr1 2540769 . C . . LowGQX END=2540869 GT ./. chr1 2541107 . A . . LowGQX END=2541273 GT ./. chr1 2542640 . T . . LowGQX END=2542800 GT ./. chr1 2543555 . G . . LowGQX END=2543655 GT ./. chr1 2560738 . G . . LowGQX END=2560924 GT ./. chr1 2572806 . G . . LowGQX END=2573335 GT ./. chr1 2575702 . C . . LowGQX END=2575918 GT ./. chr1 2576731 . C . . LowGQX END=2577003 GT ./. chr1 2700153 . C . . LowGQX END=2700321 GT ./. chr1 2702343 . G . . LowGQX END=2702589 GT ./. chr1 2704045 . C . . LowGQX END=2704272 GT ./. chr1 2706002 . T . . LowGQX END=2706162 GT ./. chr1 2938249 . G . . LowGQX END=2939387 GT ./. chr1 2980615 . A . . LowGQX END=2980867 GT ./. chr1 2983901 . C . . LowGQX END=2984166 GT ./. chr1 2985742 . C . . LowGQX END=2985893 GT ./. chr1 3102675 . G . . LowGQX END=3103041 GT ./. chr1 3160627 . A . . LowGQX END=3160727 GT ./. chr1 3301712 . G . . LowGQX END=3301853 GT ./. chr1 3310947 . C . . LowGQX END=3311107 GT ./. chr1 3312844 . C . . LowGQX END=3312944 GT ./. chr1 3312997 . G . . LowGQX END=3313160 GT ./. chr1 3319353 . A . . LowGQX END=3319565 GT ./. chr1 3321271 . G . . LowGQX END=3321453 GT ./. chr1 3322057 . A . . LowGQX END=3322215 GT ./. chr1 3327946 . A . . LowGQX END=3329367 GT ./. chr1 3331119 . T . . LowGQX END=3331219 GT ./. chr1 3334330 . C . . LowGQX END=3334581 GT ./. chr1 3335220 . C . . LowGQX END=3335320 GT ./. chr1 3342143 . A . . LowGQX END=3342317 GT ./. chr1 3342613 . A . . LowGQX END=3342792 GT ./. chr1 3347434 . A . . LowGQX END=3347675 GT ./. chr1 3348528 . A . . LowGQX END=3348707 GT ./. chr1 3350239 . A . . LowGQX END=3350378 GT ./. chr1 3379648 . C . . LowGQX END=3380237 GT ./. chr1 3382631 . C . . LowGQX END=3382785 GT ./. chr1 3383731 . G . . LowGQX END=3383902 GT ./. chr1 3385422 . T . . LowGQX END=3385522 GT ./. chr1 3385996 . G . . LowGQX END=3386160 GT ./. chr1 3388190 . G . . LowGQX END=3388356 GT ./. chr1 3389640 . A . . LowGQX END=3389797 GT ./. chr1 3389955 . A . . LowGQX END=3390213 GT ./. chr1 3391260 . T . . LowGQX END=3391360 GT ./. chr1 3392531 . C . . LowGQX END=3392631 GT ./. chr1 3394437 . A . . LowGQX END=3394593 GT ./. chr1 3394986 . A . . LowGQX END=3395179 GT ./. chr1 3396068 . C . . LowGQX END=3396168 GT ./. chr1 3396374 . A . . LowGQX END=3396480 GT ./. chr1 3397010 . A . . LowGQX END=3397154 GT ./. chr1 3407020 . C . . LowGQX END=3407173 GT ./. chr1 3407390 . G . . LowGQX END=3407550 GT ./. chr1 3409201 . A . . LowGQX END=3409282 GT ./. chr1 3409283 . C . . LowGQX END=3409334;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3410333 . A . . LowGQX END=3410466 GT ./. chr1 3410518 . G . . LowGQX END=3410691 GT ./. chr1 3410933 . A . . LowGQX END=3410999 GT ./. chr1 3411000 . G . . LowGQX END=3411018;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3411019 . A . . LowGQX END=3411020 GT ./. chr1 3411021 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 3411022 . A . . LowGQX END=3411023 GT ./. chr1 3411024 . T . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 3411025 . C . . LowGQX . GT ./. chr1 3411026 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 3411027 . A . . LowGQX . GT ./. chr1 3411028 . G . . LowGQX END=3411033;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3411034 . A . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 3411035 . G . . LowGQX END=3411037;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 3411038 . G . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 3411039 . G . . LowGQX END=3411044;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 3411045 . T . 33 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 3411046 . A . . LowGQX END=3411066;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 3411144 . G . . LowGQX END=3411154;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3411155 . C . . LowGQX . GT ./. chr1 3411156 . C . . LowGQX END=3411178;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3411179 . A . . LowGQX END=3411308 GT ./. chr1 3412421 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 3412422 . C . . LowGQX . GT ./. chr1 3412423 . T . . LowGQX END=3412424;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3412425 . T . . LowGQX . GT ./. chr1 3412426 . G . . LowGQX END=3412427;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3412428 . G . . LowGQX . GT ./. chr1 3412429 . C . . LowGQX END=3412431;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3412432 . G . . LowGQX END=3412433 GT ./. chr1 3412434 . C . . LowGQX END=3412436;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3412437 . C . . LowGQX . GT ./. chr1 3412438 . T . . LowGQX END=3412441;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3412442 . G . . LowGQX END=3412443 GT ./. chr1 3412444 . G . . LowGQX END=3412447;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3412448 . A . . LowGQX . GT ./. chr1 3412449 . C . . LowGQX END=3412450;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3412451 . C . . LowGQX END=3412452 GT ./. chr1 3412453 . C . . LowGQX END=3412454;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3412455 . T . . LowGQX END=3412456 GT ./. chr1 3412457 . G . . LowGQX END=3412458;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3412459 . T . . LowGQX END=3412461 GT ./. chr1 3412462 . C . . LowGQX END=3412468;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3412469 . C . . LowGQX . GT ./. chr1 3412470 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 3412471 . C . . LowGQX END=3412472 GT ./. chr1 3412473 . G . . LowGQX END=3412479;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3412480 . C . . LowGQX END=3412481 GT ./. chr1 3412482 . C . . LowGQX END=3412487;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3412488 . G . . LowGQX . GT ./. chr1 3412489 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 3412490 . A . . LowGQX . GT ./. chr1 3412491 . G . . LowGQX END=3412494;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3412495 . C . . LowGQX END=3412585 GT ./. chr1 3413177 . C . . LowGQX END=3413350 GT ./. chr1 3413510 . G . . LowGQX END=3413686 GT ./. chr1 3413764 . C . . LowGQX END=3413975 GT ./. chr1 3414055 . C . . LowGQX END=3414224 GT ./. chr1 3414893 . C . . LowGQX END=3415066 GT ./. chr1 3415260 . A . . LowGQX END=3415393 GT ./. chr1 3415660 . C . . LowGQX END=3415814 GT ./. chr1 3415815 . G . . LowGQX END=3415821;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3415822 . C G 8.47 LowGQX;LowGQ DP=1;Dels=0.00;FS=0.000;HRun=3;HaplotypeScore=0.0000;MQ=60;MQ0=0;QD=8.47;SB=-0.01;TI=NM_001409;GI=MEGF6;FC=Missense_A992P;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,1:1:3.01:38,3,0:60:3:1.000 chr1 3415823 . T . . PASS END=3415828;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:12:30:60 chr1 3415829 . G . . PASS END=3415833;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:16:39:59 chr1 3416150 . A . . PASS END=3416283;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:130:99:60 chr1 3416358 . A . . PASS END=3416444;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:160:99:60 chr1 3416445 . G . . PASS END=3416448;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:217:99:60 chr1 3416449 rs7553399 C A 2947.96 PASS BaseQRankSum=3.173;DP=213;Dels=0.00;FS=10.541;HRun=0;HaplotypeScore=11.4604;MQ=60;MQ0=0;MQRankSum=-0.797;QD=13.84;ReadPosRankSum=0.499;SB=-1556.62;TI=NM_001409;GI=MEGF6;FC=Missense_R916L;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:93,120:213:99:2978,0,2474:60:99:0.563 chr1 3416450 . G . . PASS END=3416491;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:199:99:60 chr1 3417195 . A . . PASS END=3417331;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:252:99:60 chr1 3417497 . T . . PASS END=3417615;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:205:99:60 chr1 3417616 . C . . PASS END=3417661;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:172:99:60 chr1 3417699 . T . . PASS END=3417716;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:82:99:60 chr1 3417717 . C . . PASS END=3417736;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:64:99:60 chr1 3417737 . T . . PASS END=3417751;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:53:99:60 chr1 3417752 . C . . PASS END=3417838;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:46:87:60 chr1 3417839 . T . . PASS END=3417867;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:57:99:60 chr1 3417868 . A . . PASS END=3417875;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:71:99:60 chr1 3418308 . T . . LowGQX END=3418528 GT ./. chr1 3421770 . A . . LowGQX END=3421909 GT ./. chr1 3421984 . A . . LowGQX END=3422123 GT ./. chr1 3422670 . A . . LowGQX END=3422803 GT ./. chr1 3424317 . C . . LowGQX END=3424490 GT ./. chr1 3425120 . A . . LowGQX END=3425256 GT ./. chr1 3425626 . G . . LowGQX END=3425837 GT ./. chr1 3426432 . A . . LowGQX END=3426602 GT ./. chr1 3427345 . A . . LowGQX END=3427469 GT ./. chr1 3428112 . A . . LowGQX END=3428254 GT ./. chr1 3428518 . A . . LowGQX END=3428695 GT ./. chr1 3431112 . A . . LowGQX END=3431239 GT ./. chr1 3431964 . A . . LowGQX END=3432094 GT ./. chr1 3440686 . A . . LowGQX END=3440813 GT ./. chr1 3447613 . C . . LowGQX END=3447810 GT ./. chr1 3477198 . T . . LowGQX END=3477409 GT ./. chr1 3496336 . T . . LowGQX END=3496547 GT ./. chr1 3511900 . A . . LowGQX END=3512014 GT ./. chr1 3518988 . T . . LowGQX END=3519167 GT ./. chr1 3527669 . A . . LowGQX END=3527835 GT ./. chr1 3541564 . C . . LowGQX END=3541904 GT ./. chr1 3541924 . C . . LowGQX END=3542084 GT ./. chr1 3542275 . A . . LowGQX END=3542456 GT ./. chr1 3544062 . A . . LowGQX END=3544220 GT ./. chr1 3544971 . A . . LowGQX END=3545170 GT ./. chr1 3547537 . T . . LowGQX END=3547684 GT ./. chr1 3547961 . T . . LowGQX END=3548224 GT ./. chr1 3548775 . A . . LowGQX END=3548944 GT ./. chr1 3549905 . C . . LowGQX END=3550070 GT ./. chr1 3551550 . T . . LowGQX END=3551650 GT ./. chr1 3551722 . A . . LowGQX END=3551861 GT ./. chr1 3552502 . T . . LowGQX END=3552602 GT ./. chr1 3553436 . T . . LowGQX END=3553665 GT ./. chr1 3555242 . T . . LowGQX END=3555401 GT ./. chr1 3563228 . A . . LowGQX END=3563398 GT ./. chr1 3563970 . A . . LowGQX END=3564127 GT ./. chr1 3566423 . C . . LowGQX END=3566580 GT ./. chr1 3598913 . A . . LowGQX END=3599013 GT ./. chr1 3599622 . A . . LowGQX END=3599747 GT ./. chr1 3607439 . C . . LowGQX END=3607539 GT ./. chr1 3624111 . A . . LowGQX END=3624377 GT ./. chr1 3638583 . A . . LowGQX END=3638783 GT ./. chr1 3639916 . A . . LowGQX END=3640036 GT ./. chr1 3643677 . A . . LowGQX END=3643791 GT ./. chr1 3644150 . G . . LowGQX END=3644337 GT ./. chr1 3644688 . T . . LowGQX END=3644788 GT ./. chr1 3645889 . A . . LowGQX END=3646017 GT ./. chr1 3646141 . A . . LowGQX END=3646241 GT ./. chr1 3646562 . A . . LowGQX END=3646715 GT ./. chr1 3647489 . A . . LowGQX END=3647632 GT ./. chr1 3648024 . C . . LowGQX END=3648124 GT ./. chr1 3649309 . A . . LowGQX END=3649646 GT ./. chr1 3659701 . G . . LowGQX END=3659801 GT ./. chr1 3662171 . C . . LowGQX END=3662768 GT ./. chr1 3669044 . T . . LowGQX END=3669366 GT ./. chr1 3670680 . A . . LowGQX END=3670808 GT ./. chr1 3672019 . A . . LowGQX END=3672134 GT ./. chr1 3673295 . A . . LowGQX END=3673457 GT ./. chr1 3677843 . A . . LowGQX END=3677997 GT ./. chr1 3679181 . C . . LowGQX END=3679281 GT ./. chr1 3679670 . A . . LowGQX END=3680041 GT ./. chr1 3680268 . A . . LowGQX END=3680403 GT ./. chr1 3683088 . T . . LowGQX END=3683188 GT ./. chr1 3683795 . A . . LowGQX END=3684012 GT ./. chr1 3686345 . A . . LowGQX END=3686454 GT ./. chr1 3687963 . A . . LowGQX END=3688090 GT ./. chr1 3691937 . C . . LowGQX END=3692052 GT ./. chr1 3692358 . G . . LowGQX END=3692486 GT ./. chr1 3697650 . C . . LowGQX END=3697903 GT ./. chr1 3698071 . C . . LowGQX END=3698171 GT ./. chr1 3699223 . A . . LowGQX END=3699330 GT ./. chr1 3700558 . A . . LowGQX END=3700678 GT ./. chr1 3701599 . T . . LowGQX END=3701770 GT ./. chr1 3703411 . A . . LowGQX END=3703877 GT ./. chr1 3712424 . A . . LowGQX END=3713043 GT ./. chr1 3731923 . C . . LowGQX END=3732084 GT ./. chr1 3732827 . G . . LowGQX END=3732937 GT ./. chr1 3739722 . T . . LowGQX END=3739822 GT ./. chr1 3739986 . A . . LowGQX END=3740029;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3740030 . T C 11.55 LowGQX;LowGQ DP=1;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;MQ=60;MQ0=0;QD=11.55;SB=-0.01;TI=NM_014704;GI=KIAA0562;FC=Missense_K821E;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,1:1:3.01:41,3,0:60:3:1.000 chr1 3740031 . G . . LowGQX END=3740049;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3740050 . C . . LowGQX END=3740067 GT ./. chr1 3740068 . C . . LowGQX END=3740129;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 3742320 . A . . LowGQX END=3742433 GT ./. chr1 3742918 . A . . LowGQX END=3743018 GT ./. chr1 3743241 . A . . LowGQX END=3743341 GT ./. chr1 3745824 . T . . LowGQX END=3745977 GT ./. chr1 3746353 . A . . LowGQX END=3746564 GT ./. chr1 3747608 . A . . LowGQX END=3747789 GT ./. chr1 3750420 . T . . LowGQX END=3750602 GT ./. chr1 3751487 . A . . LowGQX END=3751659 GT ./. chr1 3753057 . A . . LowGQX END=3753259 GT ./. chr1 3753854 . A . . LowGQX END=3754086 GT ./. chr1 3755526 . A . . LowGQX END=3755686 GT ./. chr1 3756170 . A . . LowGQX END=3756343 GT ./. chr1 3759718 . T . . LowGQX END=3759888 GT ./. chr1 3761460 . A . . LowGQX END=3761560 GT ./. chr1 3761835 . A . . LowGQX END=3761935 GT ./. chr1 3764037 . A . . LowGQX END=3764216 GT ./. chr1 3765150 . A . . LowGQX END=3765348 GT ./. chr1 3768857 . A . . LowGQX END=3768974 GT ./. chr1 3774166 . C . . LowGQX END=3774284 GT ./. chr1 3775280 . A . . LowGQX END=3775431 GT ./. chr1 3776969 . T . . LowGQX END=3777069 GT ./. chr1 3782206 . G . . LowGQX END=3782567 GT ./. chr1 3782748 . C . . LowGQX END=3782908 GT ./. chr1 3784528 . T . . LowGQX END=3784628 GT ./. chr1 3786147 . C . . LowGQX END=3786342 GT ./. chr1 3789034 . A . . LowGQX END=3789139 GT ./. chr1 3789543 . G . . LowGQX END=3789643 GT ./. chr1 3800069 . A . . LowGQX END=3800308 GT ./. chr1 3806522 . C . . LowGQX END=3806640 GT ./. chr1 3807131 . A . . LowGQX END=3807624 GT ./. chr1 3809445 . A . . LowGQX END=3809563 GT ./. chr1 3816634 . A . . LowGQX END=3816794 GT ./. chr1 4715394 . C . . LowGQX END=4715551 GT ./. chr1 4771958 . A . . LowGQX END=4772762 GT ./. chr1 4829907 . T . . LowGQX END=4830007 GT ./. chr1 4832338 . A . . LowGQX END=4832588 GT ./. chr1 4834474 . C . . LowGQX END=4834574 GT ./. chr1 4847566 . A . . LowGQX END=4847995 GT ./. chr1 5923314 . C . . LowGQX END=5923466 GT ./. chr1 5923929 . C . . LowGQX END=5924094 GT ./. chr1 5924397 . C . . LowGQX END=5924578 GT ./. chr1 5925151 . A . . LowGQX END=5925334 GT ./. chr1 5926381 . C . . LowGQX END=5926519 GT ./. chr1 5927073 . G . . LowGQX END=5927176 GT ./. chr1 5927799 . C . . LowGQX END=5928098 GT ./. chr1 5933264 . A . . LowGQX END=5933424 GT ./. chr1 5934519 . T . . LowGQX END=5934770 GT ./. chr1 5934933 . C . . LowGQX END=5935212 GT ./. chr1 5937152 . C . . LowGQX END=5937359 GT ./. chr1 5939565 . T . . LowGQX END=5939693 GT ./. chr1 5940173 . C . . LowGQX END=5940300 GT ./. chr1 5947345 . C . . LowGQX END=5947527 GT ./. chr1 5948604 . C . . LowGQX END=5948704 GT ./. chr1 5950917 . A . . LowGQX END=5951089 GT ./. chr1 5964676 . C . . LowGQX END=5964865 GT ./. chr1 5965351 . C . . LowGQX END=5965544 GT ./. chr1 5965691 . C . . LowGQX END=5965844 GT ./. chr1 5967174 . C . . LowGQX END=5967299 GT ./. chr1 5969093 . C . . LowGQX END=5969330 GT ./. chr1 5987708 . C . . LowGQX END=5987848 GT ./. chr1 5993206 . C . . LowGQX END=5993390 GT ./. chr1 6007123 . T . . LowGQX END=6007291 GT ./. chr1 6008129 . C . . LowGQX END=6008312 GT ./. chr1 6012729 . C . . LowGQX END=6012897 GT ./. chr1 6021843 . G . . LowGQX END=6022010 GT ./. chr1 6027358 . C . . LowGQX END=6027461 GT ./. chr1 6029136 . A . . LowGQX END=6029320 GT ./. chr1 6038329 . C . . LowGQX END=6038474 GT ./. chr1 6046164 . C . . LowGQX END=6046350 GT ./. chr1 6100618 . A . . LowGQX END=6100718 GT ./. chr1 6101862 . T . . LowGQX END=6101962 GT ./. chr1 6111596 . C . . LowGQX END=6111815 GT ./. chr1 6132787 . G . . LowGQX END=6132887 GT ./. chr1 6133762 . T . . LowGQX END=6133862 GT ./. chr1 6142245 . C . . LowGQX END=6142345 GT ./. chr1 6145237 . A . . LowGQX END=6145337 GT ./. chr1 6147500 . A . . LowGQX END=6147600 GT ./. chr1 6148980 . G . . LowGQX END=6149196 GT ./. chr1 6150443 . C . . LowGQX END=6150543 GT ./. chr1 6151235 . G . . LowGQX END=6151395 GT ./. chr1 6154453 . A . . LowGQX END=6154553 GT ./. chr1 6155381 . A . . LowGQX END=6155506 GT ./. chr1 6155588 . A . . LowGQX END=6155688 GT ./. chr1 6156134 . A . . LowGQX END=6156234 GT ./. chr1 6156694 . A . . LowGQX END=6156819 GT ./. chr1 6157327 . A . . LowGQX END=6157592 GT ./. chr1 6158540 . C . . LowGQX END=6158640 GT ./. chr1 6159882 . G . . LowGQX END=6160079 GT ./. chr1 6161968 . A . . LowGQX END=6162179 GT ./. chr1 6165408 . T . . LowGQX END=6165508 GT ./. chr1 6166272 . C . . LowGQX END=6166372 GT ./. chr1 6166453 . A . . LowGQX END=6166572 GT ./. chr1 6166674 . A . . LowGQX END=6166842 GT ./. chr1 6169852 . C . . LowGQX END=6170053 GT ./. chr1 6170452 . A . . LowGQX END=6170589 GT ./. chr1 6171833 . A . . LowGQX END=6171946 GT ./. chr1 6172198 . A . . LowGQX END=6172340 GT ./. chr1 6172964 . C . . LowGQX END=6173117 GT ./. chr1 6173370 . C . . LowGQX END=6173477 GT ./. chr1 6181163 . A . . LowGQX END=6181300 GT ./. chr1 6181484 . C . . LowGQX END=6181644 GT ./. chr1 6184006 . A . . LowGQX END=6184196 GT ./. chr1 6184535 . G . . LowGQX END=6184724 GT ./. chr1 6185158 . A . . LowGQX END=6185296 GT ./. chr1 6185579 . C . . LowGQX END=6185679 GT ./. chr1 6185823 . C . . LowGQX END=6185923 GT ./. chr1 6186609 . A . . LowGQX END=6186809 GT ./. chr1 6188104 . A . . LowGQX END=6188281 GT ./. chr1 6188557 . A . . LowGQX END=6188672 GT ./. chr1 6188896 . A . . LowGQX END=6189132 GT ./. chr1 6190262 . A . . LowGQX END=6190391 GT ./. chr1 6191689 . A . . LowGQX END=6191811 GT ./. chr1 6194186 . A . . LowGQX END=6194322 GT ./. chr1 6194776 . A . . LowGQX END=6194922 GT ./. chr1 6195268 . C . . LowGQX END=6195466 GT ./. chr1 6196575 . A . . LowGQX END=6196701 GT ./. chr1 6196786 . A . . LowGQX END=6196928 GT ./. chr1 6202186 . A . . LowGQX END=6202391 GT ./. chr1 6202472 . A . . LowGQX END=6202668 GT ./. chr1 6203881 . A . . LowGQX END=6203994 GT ./. chr1 6204082 . A . . LowGQX END=6204218 GT ./. chr1 6206270 . A . . LowGQX END=6206486 GT ./. chr1 6206652 . T . . LowGQX END=6207002 GT ./. chr1 6208882 . G . . LowGQX END=6209138 GT ./. chr1 6209304 . A . . LowGQX END=6209475 GT ./. chr1 6211090 . A . . LowGQX END=6211218 GT ./. chr1 6212470 . A . . LowGQX END=6212599 GT ./. chr1 6214718 . A . . LowGQX END=6214961 GT ./. chr1 6215657 . A . . LowGQX END=6215780 GT ./. chr1 6219394 . A . . LowGQX END=6219578 GT ./. chr1 6228208 . A . . LowGQX END=6228340 GT ./. chr1 6239935 . T . . LowGQX END=6240095 GT ./. chr1 6246730 . A . . LowGQX END=6246930 GT ./. chr1 6252988 . A . . LowGQX END=6253117 GT ./. chr1 6257710 . A . . LowGQX END=6257819 GT ./. chr1 6259578 . C . . LowGQX END=6259678 GT ./. chr1 6266584 . C . . LowGQX END=6266789 GT ./. chr1 6267437 . A . . LowGQX END=6267983 GT ./. chr1 6268908 . T . . LowGQX END=6269119 GT ./. chr1 6269166 . C . . LowGQX END=6269266 GT ./. chr1 6269321 . T . . LowGQX END=6269602 GT ./. chr1 6269902 . T . . LowGQX END=6270058 GT ./. chr1 6270270 . C . . LowGQX END=6270370 GT ./. chr1 6270415 . C . . LowGQX END=6270515 GT ./. chr1 6270915 . T . . LowGQX END=6271015 GT ./. chr1 6271079 . A . . LowGQX END=6271181 GT ./. chr1 6271925 . A . . LowGQX END=6272116 GT ./. chr1 6272289 . A . . LowGQX END=6272479 GT ./. chr1 6272718 . C . . LowGQX END=6272818 GT ./. chr1 6273124 . A . . LowGQX END=6273246 GT ./. chr1 6278340 . C . . LowGQX END=6278440 GT ./. chr1 6279294 . A . . LowGQX END=6279470 GT ./. chr1 6285138 . C . . LowGQX END=6285325 GT ./. chr1 6291960 . A . . LowGQX END=6292182 GT ./. chr1 6293532 . A . . LowGQX END=6293706 GT ./. chr1 6294488 . A . . LowGQX END=6294588 GT ./. chr1 6294941 . C . . LowGQX END=6295041 GT ./. chr1 6295764 . C . . LowGQX END=6295974 GT ./. chr1 6304417 . A . . LowGQX END=6304517 GT ./. chr1 6304599 . G . . LowGQX END=6304699 GT ./. chr1 6305157 . C . . LowGQX END=6305577 GT ./. chr1 6309396 . T . . LowGQX END=6310075 GT ./. chr1 6310498 . A . . LowGQX END=6310687 GT ./. chr1 6311396 . A . . LowGQX END=6311593 GT ./. chr1 6313776 . A . . LowGQX END=6314210 GT ./. chr1 6314608 . A . . LowGQX END=6314968 GT ./. chr1 6324655 . G . . LowGQX END=6324758 GT ./. chr1 6341132 . G . . LowGQX END=6341349 GT ./. chr1 6342771 . A . . LowGQX END=6342871 GT ./. chr1 6342897 . A . . LowGQX END=6342997 GT ./. chr1 6354922 . A . . LowGQX END=6355043 GT ./. chr1 6366883 . C . . LowGQX END=6366983 GT ./. chr1 6378546 . T . . LowGQX END=6378646 GT ./. chr1 6387357 . A . . LowGQX END=6387476 GT ./. chr1 6393533 . T . . LowGQX END=6393633 GT ./. chr1 6399461 . G . . LowGQX END=6399652 GT ./. chr1 6409807 . A . . LowGQX END=6409929 GT ./. chr1 6418846 . G . . LowGQX END=6418946 GT ./. chr1 6420622 . C . . LowGQX END=6420722 GT ./. chr1 6445552 . A . . LowGQX END=6445729 GT ./. chr1 6453284 . G . . LowGQX END=6453462 GT ./. chr1 6473248 . G . . LowGQX END=6473401 GT ./. chr1 6478920 . A . . LowGQX END=6479220 GT ./. chr1 6479299 . A . . LowGQX END=6479403 GT ./. chr1 6479605 . C . . LowGQX END=6479857 GT ./. chr1 6479858 . C . . PASS END=6479868;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:42:66:60 chr1 6479869 . A . . PASS END=6479873;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:60:87:60 chr1 6479874 . G . . PASS END=6479883;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:80:99:60 chr1 6479884 . C . . PASS END=6479909;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:110:99:60 chr1 6484965 . G . . LowGQX END=6485361 GT ./. chr1 6488235 . G . . LowGQX END=6488531 GT ./. chr1 6500263 . T . . LowGQX END=6500552 GT ./. chr1 6500635 . A . . LowGQX END=6500920 GT ./. chr1 6500943 . G . . LowGQX END=6501177 GT ./. chr1 6504490 . A . . LowGQX END=6504794 GT ./. chr1 6505673 . G . . LowGQX END=6506047 GT ./. chr1 6508590 . C . . LowGQX END=6509203 GT ./. chr1 6511612 . C . . LowGQX END=6512208 GT ./. chr1 6517193 . C . . LowGQX END=6517484 GT ./. chr1 6520008 . G . . LowGQX END=6520258 GT ./. chr1 6521192 . C . . LowGQX END=6521292 GT ./. chr1 6521492 . T . . LowGQX END=6521825 GT ./. chr1 6522052 . A . . LowGQX END=6522237 GT ./. chr1 6522658 . G . . LowGQX END=6522758 GT ./. chr1 6522921 . A . . LowGQX END=6523210 GT ./. chr1 6524423 . G . . LowGQX END=6524523 GT ./. chr1 6524610 . A . . LowGQX END=6524782 GT ./. chr1 6525146 . A . . LowGQX END=6525285 GT ./. chr1 6525498 . A . . LowGQX END=6525623 GT ./. chr1 6526039 . G . . LowGQX END=6526199 GT ./. chr1 6527508 . C . . LowGQX END=6527726 GT ./. chr1 6527834 . C . . LowGQX END=6528577 GT ./. chr1 6528578 . G . . LowGQX END=6528698;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 6529051 . C . . LowGQX END=6529788 GT ./. chr1 6530245 . G . . LowGQX END=6530467 GT ./. chr1 6530515 . C . . LowGQX END=6530996 GT ./. chr1 6530999 . G . . LowGQX END=6531212 GT ./. chr1 6531497 . G . . LowGQX END=6531749 GT ./. chr1 6531767 . C . . LowGQX END=6531920 GT ./. chr1 6532536 . C . . LowGQX END=6532734 GT ./. chr1 6532995 . G . . LowGQX END=6533566 GT ./. chr1 6534022 . C . . LowGQX END=6534276 GT ./. chr1 6534460 . A . . LowGQX END=6534699 GT ./. chr1 6535056 . G . . LowGQX END=6535250 GT ./. chr1 6535471 . G . . LowGQX END=6535634 GT ./. chr1 6535940 . C . . LowGQX END=6536148 GT ./. chr1 6537538 . C . . LowGQX END=6537770 GT ./. chr1 6545342 . C . . LowGQX END=6545504 GT ./. chr1 6556442 . C . . LowGQX END=6556681 GT ./. chr1 6556945 . A . . LowGQX END=6557105 GT ./. chr1 6557242 . A . . LowGQX END=6557402 GT ./. chr1 6579448 . T . . LowGQX END=6579623 GT ./. chr1 6585912 . C . . LowGQX END=6586066 GT ./. chr1 6586754 . A . . LowGQX END=6586892 GT ./. chr1 6589052 . A . . LowGQX END=6589234 GT ./. chr1 6592026 . A . . LowGQX END=6592142 GT ./. chr1 6592521 . A . . LowGQX END=6592823 GT ./. chr1 6593338 . A . . LowGQX END=6593504 GT ./. chr1 6601888 . A . . LowGQX END=6601990 GT ./. chr1 6604884 . A . . LowGQX END=6604985 GT ./. chr1 6605103 . A . . LowGQX END=6605243 GT ./. chr1 6609629 . A . . LowGQX END=6609761 GT ./. chr1 6610454 . A . . LowGQX END=6610678 GT ./. chr1 6614154 . G . . LowGQX END=6614574 GT ./. chr1 6615432 . G . . LowGQX END=6615627 GT ./. chr1 6630967 . A . . LowGQX END=6631278 GT ./. chr1 6634689 . A . . LowGQX END=6635455 GT ./. chr1 6636473 . A . . LowGQX END=6636690 GT ./. chr1 6637008 . A . . LowGQX END=6637133 GT ./. chr1 6638711 . A . . LowGQX END=6639647 GT ./. chr1 6640668 . C . . LowGQX END=6641362 GT ./. chr1 6642116 . A . . LowGQX END=6642362 GT ./. chr1 6645977 . A . . LowGQX END=6646093 GT ./. chr1 6646753 . A . . LowGQX END=6647202 GT ./. chr1 6647259 . T . . LowGQX END=6647359 GT ./. chr1 6647536 . A . . LowGQX END=6647695 GT ./. chr1 6648118 . A . . LowGQX END=6648259 GT ./. chr1 6648336 . A . . LowGQX END=6648505 GT ./. chr1 6648811 . T . . LowGQX END=6648911 GT ./. chr1 6648974 . A . . LowGQX END=6649275 GT ./. chr1 6653423 . G . . LowGQX END=6653721 GT ./. chr1 6655424 . A . . LowGQX END=6655620 GT ./. chr1 6659105 . A . . LowGQX END=6659515 GT ./. chr1 6661855 . A . . LowGQX END=6662880 GT ./. chr1 6674037 . G . . LowGQX END=6674197 GT ./. chr1 6676815 . A . . LowGQX END=6676921 GT ./. chr1 6679861 . A . . LowGQX END=6680400 GT ./. chr1 6681469 . A . . LowGQX END=6681700 GT ./. chr1 6685206 . G . . LowGQX END=6685366 GT ./. chr1 6688557 . A . . LowGQX END=6688754 GT ./. chr1 6690331 . G . . LowGQX END=6690431 GT ./. chr1 6692428 . A . . LowGQX END=6692558 GT ./. chr1 6692855 . G . . LowGQX END=6693138 GT ./. chr1 6694065 . C . . LowGQX END=6694165 GT ./. chr1 6694585 . C . . LowGQX END=6694845 GT ./. chr1 6695698 . T . . LowGQX END=6695798 GT ./. chr1 6696175 . A . . LowGQX END=6696309 GT ./. chr1 6697256 . A . . LowGQX END=6697403 GT ./. chr1 6697486 . A . . LowGQX END=6697586 GT ./. chr1 6698340 . T . . LowGQX END=6698440 GT ./. chr1 6699960 . A . . LowGQX END=6700120 GT ./. chr1 6704616 . A . . LowGQX END=6704737 GT ./. chr1 6705094 . G . . LowGQX END=6705194 GT ./. chr1 6705847 . A . . LowGQX END=6706041 GT ./. chr1 6711077 . C . . LowGQX END=6711241 GT ./. chr1 6711576 . C . . LowGQX END=6711676 GT ./. chr1 6712887 . A . . LowGQX END=6713014 GT ./. chr1 6713969 . A . . LowGQX END=6714102 GT ./. chr1 6727767 . A . . LowGQX END=6727873 GT ./. chr1 6738381 . G . . LowGQX END=6738541 GT ./. chr1 6740966 . A . . LowGQX END=6741100 GT ./. chr1 6761717 . C . . LowGQX END=6761875 GT ./. chr1 6845504 . G . . LowGQX END=6845664 GT ./. chr1 6867042 . G . . LowGQX END=6867149 GT ./. chr1 6880226 . T . . LowGQX END=6880326 GT ./. chr1 6885150 . A . . LowGQX END=6885273 GT ./. chr1 6931771 . T . . LowGQX END=6931871 GT ./. chr1 6946258 . T . . LowGQX END=6946358 GT ./. chr1 6947700 . C . . LowGQX END=6947800 GT ./. chr1 7151292 . A . . LowGQX END=7151448 GT ./. chr1 7202141 . C . . LowGQX END=7202241 GT ./. chr1 7309549 . A . . LowGQX END=7309689 GT ./. chr1 7527816 . C . . LowGQX END=7527976 GT ./. chr1 7700458 . A . . LowGQX END=7700616 GT ./. chr1 7721784 . A . . LowGQX END=7721929 GT ./. chr1 7723411 . A . . LowGQX END=7725262 GT ./. chr1 7730969 . A . . LowGQX END=7731100 GT ./. chr1 7732035 . G . . LowGQX END=7732195 GT ./. chr1 7737657 . A . . LowGQX END=7737796 GT ./. chr1 7740145 . G . . LowGQX END=7740305 GT ./. chr1 7792485 . C . . LowGQX END=7792662 GT ./. chr1 7796402 . A . . LowGQX END=7796603 GT ./. chr1 7796981 . T . . LowGQX END=7797081 GT ./. chr1 7797313 . A . . LowGQX END=7797633 GT ./. chr1 7798017 . A . . LowGQX END=7798545 GT ./. chr1 7804893 . A . . LowGQX END=7805085 GT ./. chr1 7805903 . A . . LowGQX END=7806154 GT ./. chr1 7807756 . A . . LowGQX END=7807856 GT ./. chr1 7809792 . A . . LowGQX END=7809892 GT ./. chr1 7810992 . A . . LowGQX END=7811092 GT ./. chr1 7811257 . A . . LowGQX END=7811455 GT ./. chr1 7812446 . T . . LowGQX END=7812607 GT ./. chr1 7815664 . T . . LowGQX END=7815764 GT ./. chr1 7826500 . T . . LowGQX END=7826600 GT ./. chr1 7831335 . G . . LowGQX END=7831495 GT ./. chr1 7833487 . C . . LowGQX END=7833587 GT ./. chr1 7837218 . A . . LowGQX END=7837381 GT ./. chr1 7838154 . A . . LowGQX END=7838254 GT ./. chr1 7839646 . G . . LowGQX END=7839746 GT ./. chr1 7844905 . C . . LowGQX END=7845116 GT ./. chr1 7845499 . A . . LowGQX END=7845649 GT ./. chr1 7846779 . A . . LowGQX END=7846899 GT ./. chr1 7847476 . C . . LowGQX END=7847576 GT ./. chr1 7848103 . A . . LowGQX END=7848309 GT ./. chr1 7853994 . T . . LowGQX END=7854094 GT ./. chr1 7858583 . A . . LowGQX END=7858736 GT ./. chr1 7861101 . T . . LowGQX END=7861263 GT ./. chr1 7863105 . A . . LowGQX END=7863216 GT ./. chr1 7863750 . A . . LowGQX END=7863913 GT ./. chr1 7868891 . T . . LowGQX END=7869061 GT ./. chr1 7869951 . A . . LowGQX END=7870084 GT ./. chr1 7870496 . A . . LowGQX END=7870649 GT ./. chr1 7879343 . A . . LowGQX END=7879483 GT ./. chr1 7880173 . A . . LowGQX END=7880302 GT ./. chr1 7880525 . A . . LowGQX END=7880703 GT ./. chr1 7886538 . A . . LowGQX END=7886773 GT ./. chr1 7887176 . A . . LowGQX END=7887878 GT ./. chr1 7889893 . G . . LowGQX END=7890224 GT ./. chr1 7895820 . A . . LowGQX END=7896008 GT ./. chr1 7897057 . A . . LowGQX END=7897212 GT ./. chr1 7902724 . T . . LowGQX END=7902824 GT ./. chr1 7903957 . A . . LowGQX END=7904057 GT ./. chr1 7906410 . A . . LowGQX END=7906510 GT ./. chr1 7906739 . A . . LowGQX END=7906839 GT ./. chr1 7907824 . C . . LowGQX END=7907945 GT ./. chr1 7909618 . C . . LowGQX END=7909772 GT ./. chr1 7910870 . A . . LowGQX END=7910985 GT ./. chr1 7912959 . A . . LowGQX END=7913066 GT ./. chr1 7913315 . G . . LowGQX END=7913494 GT ./. chr1 7980890 . C . . LowGQX END=7980990 GT ./. chr1 7993220 . A . . LowGQX END=7993359 GT ./. chr1 7995071 . A . . LowGQX END=7995206 GT ./. chr1 7997734 . A . . LowGQX END=7997834 GT ./. chr1 7998251 . A . . LowGQX END=7998393 GT ./. chr1 7998779 . A . . LowGQX END=7998891 GT ./. chr1 7999953 . A . . LowGQX END=8000057 GT ./. chr1 8022795 . G . . LowGQX END=8022987 GT ./. chr1 8025333 . C . . LowGQX END=8025537 GT ./. chr1 8029354 . C . . LowGQX END=8029506 GT ./. chr1 8030903 . G . . LowGQX END=8031075 GT ./. chr1 8037661 . A . . LowGQX END=8037840 GT ./. chr1 8044903 . T . . LowGQX END=8045166 GT ./. chr1 8073268 . G . . LowGQX END=8074459 GT ./. chr1 8075357 . A . . LowGQX END=8075457 GT ./. chr1 8075553 . A . . LowGQX END=8075682 GT ./. chr1 8378097 . G . . LowGQX END=8378258 GT ./. chr1 8384365 . G . . LowGQX END=8384789 GT ./. chr1 8385355 . C . . LowGQX END=8385455 GT ./. chr1 8385876 . A . . LowGQX END=8386105 GT ./. chr1 8390267 . A . . LowGQX END=8390999 GT ./. chr1 8395495 . A . . LowGQX END=8395653 GT ./. chr1 8397874 . A . . LowGQX END=8398055 GT ./. chr1 8399551 . A . . LowGQX END=8399761 GT ./. chr1 8403805 . A . . LowGQX END=8404076 GT ./. chr1 8415114 . G . . LowGQX END=8415214 GT ./. chr1 8415466 . C . . LowGQX END=8415662 GT ./. chr1 8416127 . G . . LowGQX END=8416338 GT ./. chr1 8418254 . A . . LowGQX END=8418979 GT ./. chr1 8419822 . A . . LowGQX END=8420049 GT ./. chr1 8420170 . A . . LowGQX END=8421560 GT ./. chr1 8421821 . A . . LowGQX END=8421939 GT ./. chr1 8422711 . G . . LowGQX END=8422907 GT ./. chr1 8424114 . A . . LowGQX END=8424318 GT ./. chr1 8424803 . T . . LowGQX END=8424903 GT ./. chr1 8425870 . A . . LowGQX END=8426037 GT ./. chr1 8440783 . T . . LowGQX END=8441146 GT ./. chr1 8482778 . T . . LowGQX END=8482878 GT ./. chr1 8525721 . T . . LowGQX END=8526086 GT ./. chr1 8555121 . A . . LowGQX END=8555225 GT ./. chr1 8557463 . A . . LowGQX END=8557592 GT ./. chr1 8568661 . A . . LowGQX END=8568761 GT ./. chr1 8585781 . A . . LowGQX END=8585881 GT ./. chr1 8601271 . A . . LowGQX END=8601380 GT ./. chr1 8616532 . A . . LowGQX END=8616633 GT ./. chr1 8617475 . A . . LowGQX END=8617635 GT ./. chr1 8674618 . A . . LowGQX END=8674748 GT ./. chr1 8684355 . T . . LowGQX END=8684455 GT ./. chr1 8716030 . A . . LowGQX END=8716359 GT ./. chr1 8921404 . T . . LowGQX END=8921504 GT ./. chr1 8922926 . T . . LowGQX END=8923026 GT ./. chr1 8923261 . T . . LowGQX END=8923405 GT ./. chr1 8923948 . A . . LowGQX END=8924154 GT ./. chr1 8925342 . A . . LowGQX END=8925544 GT ./. chr1 8926336 . A . . LowGQX END=8926563 GT ./. chr1 8927174 . A . . LowGQX END=8927312 GT ./. chr1 8928032 . C . . LowGQX END=8928132 GT ./. chr1 8930491 . T . . LowGQX END=8930591 GT ./. chr1 8931948 . A . . LowGQX END=8932048 GT ./. chr1 8934879 . A . . LowGQX END=8934979 GT ./. chr1 8938639 . C . . LowGQX END=8938863 GT ./. chr1 9005876 . A . . LowGQX END=9006036 GT ./. chr1 9009320 . A . . LowGQX END=9009520 GT ./. chr1 9011481 . G . . LowGQX END=9011763 GT ./. chr1 9017194 . A . . LowGQX END=9017347 GT ./. chr1 9018966 . C . . LowGQX END=9019066 GT ./. chr1 9022631 . T . . LowGQX END=9022731 GT ./. chr1 9027716 . A . . LowGQX END=9027878 GT ./. chr1 9030924 . A . . LowGQX END=9031043 GT ./. chr1 9034405 . G . . LowGQX END=9034505 GT ./. chr1 9034619 . T . . LowGQX END=9034773 GT ./. chr1 9063357 . C . . LowGQX END=9063580 GT ./. chr1 9064809 . A . . LowGQX END=9064941 GT ./. chr1 9067357 . G . . LowGQX END=9067457 GT ./. chr1 9070200 . A . . LowGQX END=9070306 GT ./. chr1 9073582 . A . . LowGQX END=9073697 GT ./. chr1 9074728 . C . . LowGQX END=9074930 GT ./. chr1 9075133 . C . . LowGQX END=9075304 GT ./. chr1 9078280 . A . . LowGQX END=9078437 GT ./. chr1 9079266 . A . . LowGQX END=9079395 GT ./. chr1 9082975 . A . . LowGQX END=9083140 GT ./. chr1 9085033 . A . . LowGQX END=9085136 GT ./. chr1 9086270 . C . . LowGQX END=9086430 GT ./. chr1 9097643 . A . . LowGQX END=9097851 GT ./. chr1 9097954 . A . . LowGQX END=9098086 GT ./. chr1 9098478 . T . . LowGQX END=9098578 GT ./. chr1 9098885 . A . . LowGQX END=9098991 GT ./. chr1 9099609 . A . . LowGQX END=9099724 GT ./. chr1 9099857 . A . . LowGQX END=9100049 GT ./. chr1 9100121 . A . . LowGQX END=9100283 GT ./. chr1 9101679 . G . . LowGQX END=9101999 GT ./. chr1 9107667 . A . . LowGQX END=9107796 GT ./. chr1 9109158 . C . . LowGQX END=9109275 GT ./. chr1 9117505 . A . . LowGQX END=9117695 GT ./. chr1 9118209 . A . . LowGQX END=9118312 GT ./. chr1 9129530 . C . . LowGQX END=9129630 GT ./. chr1 9164476 . G . . LowGQX END=9164696 GT ./. chr1 9165543 . A . . LowGQX END=9165742 GT ./. chr1 9171215 . T . . LowGQX END=9171551 GT ./. chr1 9188323 . T . . LowGQX END=9189254 GT ./. chr1 9211697 . C . . LowGQX END=9211895 GT ./. chr1 9242066 . C . . LowGQX END=9242346 GT ./. chr1 9304943 . G . . LowGQX END=9305672 GT ./. chr1 9306974 . C . . LowGQX END=9307194 GT ./. chr1 9322067 . T . . LowGQX END=9322439 GT ./. chr1 9323517 . A . . LowGQX END=9324980 GT ./. chr1 9415949 . A . . LowGQX END=9416647 GT ./. chr1 9427455 . T . . LowGQX END=9427637 GT ./. chr1 9599669 . A . . LowGQX END=9599829 GT ./. chr1 9613682 . A . . LowGQX END=9613866 GT ./. chr1 9627331 . T . . LowGQX END=9627431 GT ./. chr1 9630314 . A . . LowGQX END=9630419 GT ./. chr1 9633388 . T . . LowGQX END=9633488 GT ./. chr1 9640010 . A . . LowGQX END=9640295 GT ./. chr1 9642355 . A . . LowGQX END=9642562 GT ./. chr1 9648936 . C . . LowGQX END=9649104 GT ./. chr1 9655946 . A . . LowGQX END=9656071 GT ./. chr1 9656915 . A . . LowGQX END=9657114 GT ./. chr1 9658505 . A . . LowGQX END=9658686 GT ./. chr1 9661161 . A . . LowGQX END=9661515 GT ./. chr1 9662125 . A . . LowGQX END=9662352 GT ./. chr1 9667614 . G . . LowGQX END=9667848 GT ./. chr1 9669884 . C . . LowGQX END=9669984 GT ./. chr1 9670563 . G . . LowGQX END=9670864 GT ./. chr1 9671053 . T . . LowGQX END=9671153 GT ./. chr1 9671770 . A . . LowGQX END=9671949 GT ./. chr1 9673043 . G . . LowGQX END=9673143 GT ./. chr1 9713836 . T . . LowGQX END=9714102 GT ./. chr1 9714204 . C . . LowGQX END=9714504 GT ./. chr1 9770463 . G . . LowGQX END=9770706 GT ./. chr1 9775548 . C . . LowGQX END=9776188 GT ./. chr1 9776447 . G . . LowGQX END=9776729 GT ./. chr1 9776966 . G . . LowGQX END=9777218 GT ./. chr1 9777544 . G . . LowGQX END=9777736 GT ./. chr1 9778156 . C . . LowGQX END=9778256 GT ./. chr1 9778701 . A . . LowGQX END=9779025 GT ./. chr1 9779928 . G . . LowGQX END=9780352 GT ./. chr1 9780491 . G . . LowGQX END=9781019 GT ./. chr1 9781134 . A . . LowGQX END=9781358 GT ./. chr1 9781451 . T . . LowGQX END=9781698 GT ./. chr1 9781768 . G . . LowGQX END=9781970 GT ./. chr1 9781982 . C . . LowGQX END=9782466 GT ./. chr1 9782525 . A . . LowGQX END=9782716 GT ./. chr1 9783132 . G . . LowGQX END=9783402 GT ./. chr1 9783976 . A . . LowGQX END=9784202 GT ./. chr1 9784283 . T . . LowGQX END=9784531 GT ./. chr1 9784811 . C . . LowGQX END=9785046 GT ./. chr1 9786916 . G . . LowGQX END=9787156 GT ./. chr1 9790564 . G . . LowGQX END=9790766 GT ./. chr1 9791180 . C . . LowGQX END=9791451 GT ./. chr1 9791817 . A . . LowGQX END=9791957 GT ./. chr1 9793457 . A . . LowGQX END=9793607 GT ./. chr1 9794028 . A . . LowGQX END=9794203 GT ./. chr1 9795004 . A . . LowGQX END=9795235 GT ./. chr1 9795523 . A . . LowGQX END=9795676 GT ./. chr1 9795941 . A . . LowGQX END=9796103 GT ./. chr1 9797535 . G . . LowGQX END=9797635 GT ./. chr1 9801150 . A . . LowGQX END=9801317 GT ./. chr1 9803940 . A . . LowGQX END=9804066 GT ./. chr1 9804451 . A . . LowGQX END=9804704 GT ./. chr1 9809517 . A . . LowGQX END=9809707 GT ./. chr1 9809820 . A . . LowGQX END=9809974 GT ./. chr1 9811529 . A . . LowGQX END=9811742 GT ./. chr1 9815170 . A . . LowGQX END=9815370 GT ./. chr1 9816504 . T . . LowGQX END=9816604 GT ./. chr1 9833278 . G . . LowGQX END=9833455 GT ./. chr1 9883697 . T . . LowGQX END=9883848 GT ./. chr1 9910756 . G . . LowGQX END=9910856 GT ./. chr1 9931241 . T . . LowGQX END=9931393 GT ./. chr1 9932025 . A . . LowGQX END=9932125 GT ./. chr1 9990437 . T . . LowGQX END=9990537 GT ./. chr1 9991940 . G . . LowGQX END=9992040 GT ./. chr1 9992859 . A . . LowGQX END=9992959 GT ./. chr1 9994818 . A . . LowGQX END=9994921 GT ./. chr1 9995548 . A . . LowGQX END=9995688 GT ./. chr1 9996575 . A . . LowGQX END=9996686 GT ./. chr1 10002716 . G . . LowGQX END=10002816 GT ./. chr1 10032130 . C . . LowGQX END=10032249 GT ./. chr1 10035648 . A . . LowGQX END=10035836 GT ./. chr1 10041087 . A . . LowGQX END=10041231 GT ./. chr1 10041286 . A . . LowGQX END=10041386 GT ./. chr1 10042357 . A . . LowGQX END=10042762 GT ./. chr1 10057245 . C . . LowGQX END=10057404 GT ./. chr1 10066954 . T . . LowGQX END=10067240 GT ./. chr1 10067626 . A . . LowGQX END=10067809 GT ./. chr1 10068229 . A . . LowGQX END=10068335 GT ./. chr1 10075816 . T . . LowGQX END=10075916 GT ./. chr1 10093691 . A . . LowGQX END=10093791 GT ./. chr1 10132084 . A . . LowGQX END=10132284 GT ./. chr1 10132508 . A . . LowGQX END=10132608 GT ./. chr1 10155517 . A . . LowGQX END=10155657 GT ./. chr1 10161160 . T . . LowGQX END=10161260 GT ./. chr1 10163004 . A . . LowGQX END=10163153 GT ./. chr1 10165572 . A . . LowGQX END=10165805 GT ./. chr1 10166253 . A . . LowGQX END=10166644 GT ./. chr1 10167250 . T . . LowGQX END=10167433 GT ./. chr1 10177465 . C . . LowGQX END=10177661 GT ./. chr1 10179569 . A . . LowGQX END=10179674 GT ./. chr1 10182018 . A . . LowGQX END=10182137 GT ./. chr1 10186844 . T . . LowGQX END=10186944 GT ./. chr1 10189429 . T . . LowGQX END=10189529 GT ./. chr1 10190556 . A . . LowGQX END=10190677 GT ./. chr1 10190771 . A . . LowGQX END=10190874 GT ./. chr1 10192425 . A . . LowGQX END=10192543 GT ./. chr1 10195044 . A . . LowGQX END=10195247 GT ./. chr1 10197123 . A . . LowGQX END=10197266 GT ./. chr1 10204996 . A . . LowGQX END=10205100 GT ./. chr1 10207019 . A . . LowGQX END=10207151 GT ./. chr1 10209240 . A . . LowGQX END=10209343 GT ./. chr1 10211382 . A . . LowGQX END=10211622 GT ./. chr1 10218412 . A . . LowGQX END=10218543 GT ./. chr1 10221198 . A . . LowGQX END=10221347 GT ./. chr1 10228192 . A . . LowGQX END=10228331 GT ./. chr1 10231194 . A . . LowGQX END=10231390 GT ./. chr1 10238700 . A . . LowGQX END=10238889 GT ./. chr1 10239472 . A . . LowGQX END=10239623 GT ./. chr1 10239934 . C . . LowGQX END=10240034 GT ./. chr1 10292336 . T . . LowGQX END=10292544 GT ./. chr1 10316254 . A . . LowGQX END=10316433 GT ./. chr1 10318500 . A . . LowGQX END=10318782 GT ./. chr1 10321912 . A . . LowGQX END=10322080 GT ./. chr1 10327387 . C . . LowGQX END=10327668 GT ./. chr1 10328159 . A . . LowGQX END=10328373 GT ./. chr1 10331509 . C . . LowGQX END=10331689 GT ./. chr1 10332248 . A . . LowGQX END=10332416 GT ./. chr1 10332462 . C . . LowGQX END=10332562 GT ./. chr1 10333031 . C . . LowGQX END=10333131 GT ./. chr1 10334928 . G . . LowGQX END=10335028 GT ./. chr1 10335435 . A . . LowGQX END=10335613 GT ./. chr1 10336328 . A . . LowGQX END=10336509 GT ./. chr1 10337993 . G . . LowGQX END=10338238 GT ./. chr1 10339126 . C . . LowGQX END=10339226 GT ./. chr1 10342369 . C . . LowGQX END=10342643 GT ./. chr1 10351089 . T . . LowGQX END=10351271 GT ./. chr1 10352053 . A . . LowGQX END=10352232 GT ./. chr1 10355093 . A . . LowGQX END=10355275 GT ./. chr1 10355667 . A . . LowGQX END=10355876 GT ./. chr1 10356589 . T . . LowGQX END=10356775 GT ./. chr1 10356904 . C . . LowGQX END=10357356 GT ./. chr1 10363170 . A . . LowGQX END=10364757 GT ./. chr1 10380050 . C . . LowGQX END=10380246 GT ./. chr1 10381716 . T . . LowGQX END=10381967 GT ./. chr1 10383891 . G . . LowGQX END=10384172 GT ./. chr1 10384765 . T . . LowGQX END=10385005 GT ./. chr1 10386118 . A . . LowGQX END=10386469 GT ./. chr1 10394527 . T . . LowGQX END=10394748 GT ./. chr1 10396664 . T . . LowGQX END=10396852 GT ./. chr1 10397081 . A . . LowGQX END=10397313 GT ./. chr1 10397378 . C . . LowGQX END=10397643 GT ./. chr1 10399776 . A . . LowGQX END=10399969 GT ./. chr1 10402057 . G . . LowGQX END=10402278 GT ./. chr1 10403228 . G . . LowGQX END=10403397 GT ./. chr1 10405852 . T . . LowGQX END=10406063 GT ./. chr1 10407762 . C . . LowGQX END=10407937 GT ./. chr1 10408656 . A . . LowGQX END=10408843 GT ./. chr1 10412638 . G . . LowGQX END=10412846 GT ./. chr1 10420936 . A . . LowGQX END=10421153 GT ./. chr1 10421699 . G . . LowGQX END=10421935 GT ./. chr1 10423290 . C . . LowGQX END=10423454 GT ./. chr1 10425107 . T . . LowGQX END=10425355 GT ./. chr1 10425416 . A . . LowGQX END=10425758 GT ./. chr1 10428471 . C . . LowGQX END=10428648 GT ./. chr1 10431148 . A . . LowGQX END=10431372 GT ./. chr1 10434323 . T . . LowGQX END=10434575 GT ./. chr1 10434861 . G . . LowGQX END=10435156 GT ./. chr1 10435262 . C . . LowGQX END=10435483 GT ./. chr1 10436552 . C . . LowGQX END=10436697 GT ./. chr1 10438379 . C . . LowGQX END=10438479 GT ./. chr1 10459069 . A . . LowGQX END=10459229 GT ./. chr1 10459674 . C . . LowGQX END=10459774 GT ./. chr1 10460448 . A . . LowGQX END=10460632 GT ./. chr1 10463111 . C . . LowGQX END=10463211 GT ./. chr1 10464216 . A . . LowGQX END=10464339 GT ./. chr1 10468113 . T . . LowGQX END=10468213 GT ./. chr1 10471473 . A . . LowGQX END=10471612 GT ./. chr1 10473117 . A . . LowGQX END=10473311 GT ./. chr1 10477042 . A . . LowGQX END=10477177 GT ./. chr1 10477431 . A . . LowGQX END=10477569 GT ./. chr1 10478881 . A . . LowGQX END=10478985 GT ./. chr1 10479472 . A . . LowGQX END=10479599 GT ./. chr1 10479685 . A . . LowGQX END=10479809 GT ./. chr1 10490491 . C . . LowGQX END=10490651 GT ./. chr1 10491346 . A . . LowGQX END=10491459 GT ./. chr1 10493897 . A . . LowGQX END=10494025 GT ./. chr1 10494622 . G . . LowGQX END=10494781 GT ./. chr1 10500388 . T . . LowGQX END=10500488 GT ./. chr1 10502280 . A . . LowGQX END=10502465 GT ./. chr1 10510129 . A . . LowGQX END=10510382 GT ./. chr1 10511432 . A . . LowGQX END=10511655 GT ./. chr1 10521545 . T . . LowGQX END=10521762 GT ./. chr1 10523089 . G . . LowGQX END=10523269 GT ./. chr1 10523486 . A . . LowGQX END=10523680 GT ./. chr1 10527245 . A . . LowGQX END=10527392 GT ./. chr1 10529232 . A . . LowGQX END=10529398 GT ./. chr1 10532378 . A . . LowGQX END=10532518 GT ./. chr1 10534973 . G . . LowGQX END=10535111 GT ./. chr1 10555265 . C . . LowGQX END=10555430 GT ./. chr1 10596219 . A . . LowGQX END=10596406 GT ./. chr1 10659244 . A . . LowGQX END=10659475 GT ./. chr1 10678338 . A . . LowGQX END=10678526 GT ./. chr1 10683025 . A . . LowGQX END=10683234 GT ./. chr1 10684346 . A . . LowGQX END=10684546 GT ./. chr1 10687278 . C . . LowGQX END=10687472 GT ./. chr1 10689537 . G . . LowGQX END=10690096 GT ./. chr1 10698986 . C . . LowGQX END=10700119 GT ./. chr1 10702914 . A . . LowGQX END=10703060 GT ./. chr1 10703215 . A . . LowGQX END=10703371 GT ./. chr1 10704972 . A . . LowGQX END=10705148 GT ./. chr1 10706183 . A . . LowGQX END=10706386 GT ./. chr1 10707841 . C . . LowGQX END=10708199 GT ./. chr1 10709125 . A . . LowGQX END=10709252 GT ./. chr1 10709338 . A . . LowGQX END=10709497 GT ./. chr1 10710731 . G . . LowGQX END=10710831 GT ./. chr1 10710946 . A . . LowGQX END=10711175 GT ./. chr1 10713093 . T . . LowGQX END=10714278 GT ./. chr1 10714474 . A . . LowGQX END=10714651 GT ./. chr1 10715704 . A . . LowGQX END=10715873 GT ./. chr1 10716699 . G . . LowGQX END=10716799 GT ./. chr1 10718549 . C . . LowGQX END=10718649 GT ./. chr1 10719757 . A . . LowGQX END=10720676 GT ./. chr1 10725138 . A . . LowGQX END=10725631 GT ./. chr1 10753840 . C . . LowGQX END=10754000 GT ./. chr1 10754329 . T . . LowGQX END=10754429 GT ./. chr1 11007718 . G . . LowGQX END=11008904 GT ./. chr1 11009667 . A . . LowGQX END=11009874 GT ./. chr1 11014074 . A . . LowGQX END=11014202 GT ./. chr1 11015045 . A . . LowGQX END=11015246 GT ./. chr1 11017072 . G . . LowGQX END=11017172 GT ./. chr1 11017640 . A . . LowGQX END=11017813 GT ./. chr1 11018681 . A . . LowGQX END=11018841 GT ./. chr1 11024183 . A . . LowGQX END=11024329 GT ./. chr1 11026414 . C . . LowGQX END=11026540 GT ./. chr1 11030026 . C . . LowGQX END=11030147 GT ./. chr1 11036212 . C . . LowGQX END=11036314 GT ./. chr1 11042032 . A . . LowGQX END=11042132 GT ./. chr1 11073734 . G . . LowGQX END=11074074 GT ./. chr1 11076850 . A . . LowGQX END=11077116 GT ./. chr1 11078739 . G . . LowGQX END=11078982 GT ./. chr1 11080435 . C . . LowGQX END=11080708 GT ./. chr1 11082130 . A . . LowGQX END=11082763 GT ./. chr1 11083228 . A . . LowGQX END=11083328 GT ./. chr1 11086940 . A . . LowGQX END=11087708 GT ./. chr1 11090221 . T . . LowGQX END=11090321 GT ./. chr1 11090803 . A . . LowGQX END=11090942 GT ./. chr1 11094875 . A . . LowGQX END=11094975 GT ./. chr1 11097748 . A . . LowGQX END=11097871 GT ./. chr1 11102930 . A . . LowGQX END=11103082 GT ./. chr1 11103394 . A . . LowGQX END=11103595 GT ./. chr1 11104894 . G . . LowGQX END=11105054 GT ./. chr1 11105265 . C . . LowGQX END=11105599 GT ./. chr1 11106557 . T . . LowGQX END=11106793 GT ./. chr1 11106946 . A . . LowGQX END=11107179 GT ./. chr1 11107213 . G . . LowGQX END=11107313 GT ./. chr1 11114823 . A . . LowGQX END=11115144 GT ./. chr1 11115796 . C . . LowGQX END=11115986 GT ./. chr1 11116060 . T . . LowGQX END=11116160 GT ./. chr1 11116659 . A . . LowGQX END=11116817 GT ./. chr1 11118854 . C . . LowGQX END=11118954 GT ./. chr1 11119280 . A . . LowGQX END=11119405 GT ./. chr1 11119811 . G . . LowGQX END=11120003 GT ./. chr1 11126741 . C . . LowGQX END=11126841 GT ./. chr1 11128054 . C . . LowGQX END=11128154 GT ./. chr1 11128683 . C . . LowGQX END=11128783 GT ./. chr1 11129614 . A . . LowGQX END=11129790 GT ./. chr1 11130944 . A . . LowGQX END=11131044 GT ./. chr1 11132137 . G . . LowGQX END=11132237 GT ./. chr1 11133979 . A . . LowGQX END=11134079 GT ./. chr1 11134286 . A . . LowGQX END=11134386 GT ./. chr1 11136897 . A . . LowGQX END=11137008 GT ./. chr1 11137417 . T . . LowGQX END=11137711 GT ./. chr1 11139766 . A . . LowGQX END=11139882 GT ./. chr1 11140532 . A . . LowGQX END=11140632 GT ./. chr1 11140787 . G . . LowGQX END=11140972 GT ./. chr1 11141137 . A . . LowGQX END=11141298 GT ./. chr1 11142743 . A . . LowGQX END=11142938 GT ./. chr1 11147503 . A . . LowGQX END=11147651 GT ./. chr1 11147855 . A . . LowGQX END=11147970 GT ./. chr1 11148168 . C . . LowGQX END=11148268 GT ./. chr1 11150539 . C . . LowGQX END=11150728 GT ./. chr1 11151069 . A . . LowGQX END=11151239 GT ./. chr1 11151548 . A . . LowGQX END=11151657 GT ./. chr1 11155813 . A . . LowGQX END=11155941 GT ./. chr1 11158075 . A . . LowGQX END=11158216 GT ./. chr1 11159776 . A . . LowGQX END=11159891 GT ./. chr1 11166996 . C . . LowGQX END=11167182 GT ./. chr1 11167500 . A . . LowGQX END=11167600 GT ./. chr1 11168236 . A . . LowGQX END=11168346 GT ./. chr1 11169338 . C . . LowGQX END=11169438 GT ./. chr1 11169697 . T . . LowGQX END=11169797 GT ./. chr1 11171137 . C . . LowGQX END=11171237 GT ./. chr1 11172837 . G . . LowGQX END=11172992 GT ./. chr1 11174373 . A . . LowGQX END=11174513 GT ./. chr1 11174858 . A . . LowGQX END=11174958 GT ./. chr1 11175440 . A . . LowGQX END=11175540 GT ./. chr1 11177053 . T . . LowGQX END=11177153 GT ./. chr1 11181301 . A . . LowGQX END=11181428 GT ./. chr1 11182034 . A . . LowGQX END=11182186 GT ./. chr1 11184553 . A . . LowGQX END=11184693 GT ./. chr1 11186677 . A . . LowGQX END=11186856 GT ./. chr1 11187065 . A . . LowGQX END=11187204 GT ./. chr1 11187679 . A . . LowGQX END=11187866 GT ./. chr1 11188059 . A . . LowGQX END=11188186 GT ./. chr1 11188509 . A . . LowGQX END=11188612 GT ./. chr1 11188910 . A . . LowGQX END=11189011 GT ./. chr1 11189793 . A . . LowGQX END=11189898 GT ./. chr1 11190584 . A . . LowGQX END=11190837 GT ./. chr1 11193135 . A . . LowGQX END=11193257 GT ./. chr1 11194406 . A . . LowGQX END=11194526 GT ./. chr1 11199359 . A . . LowGQX END=11199539 GT ./. chr1 11199588 . A . . LowGQX END=11199718 GT ./. chr1 11204703 . A . . LowGQX END=11204815 GT ./. chr1 11205014 . T . . LowGQX END=11205114 GT ./. chr1 11206731 . A . . LowGQX END=11206851 GT ./. chr1 11210181 . A . . LowGQX END=11210286 GT ./. chr1 11217207 . A . . LowGQX END=11217351 GT ./. chr1 11227487 . T . . LowGQX END=11227587 GT ./. chr1 11249635 . A . . LowGQX END=11250015 GT ./. chr1 11252325 . A . . LowGQX END=11252430 GT ./. chr1 11253635 . A . . LowGQX END=11253841 GT ./. chr1 11254516 . A . . LowGQX END=11254719 GT ./. chr1 11254909 . A . . LowGQX END=11255083 GT ./. chr1 11259313 . A . . LowGQX END=11259463 GT ./. chr1 11259596 . A . . LowGQX END=11259763 GT ./. chr1 11264616 . A . . LowGQX END=11264763 GT ./. chr1 11269367 . G . . LowGQX END=11269518 GT ./. chr1 11270868 . C . . LowGQX END=11270968 GT ./. chr1 11272367 . A . . LowGQX END=11272534 GT ./. chr1 11272851 . A . . LowGQX END=11272968 GT ./. chr1 11273454 . A . . LowGQX END=11273626 GT ./. chr1 11276199 . A . . LowGQX END=11276299 GT ./. chr1 11288723 . A . . LowGQX END=11288978 GT ./. chr1 11290980 . A . . LowGQX END=11291114 GT ./. chr1 11291355 . A . . LowGQX END=11291494 GT ./. chr1 11292490 . C . . LowGQX END=11292590 GT ./. chr1 11293450 . T . . LowGQX END=11293550 GT ./. chr1 11294148 . A . . LowGQX END=11294325 GT ./. chr1 11297898 . A . . LowGQX END=11298108 GT ./. chr1 11298457 . A . . LowGQX END=11298677 GT ./. chr1 11300358 . A . . LowGQX END=11300607 GT ./. chr1 11301608 . A . . LowGQX END=11301741 GT ./. chr1 11303159 . A . . LowGQX END=11303360 GT ./. chr1 11307680 . A . . LowGQX END=11307793 GT ./. chr1 11307874 . A . . LowGQX END=11308154 GT ./. chr1 11313894 . A . . LowGQX END=11314033 GT ./. chr1 11316047 . A . . LowGQX END=11316252 GT ./. chr1 11316988 . A . . LowGQX END=11317225 GT ./. chr1 11318540 . A . . LowGQX END=11318653 GT ./. chr1 11319282 . C . . LowGQX END=11319469 GT ./. chr1 11333538 . T . . LowGQX END=11334169 GT ./. chr1 11345650 . T . . LowGQX END=11346240 GT ./. chr1 11354885 . C . . LowGQX END=11354985 GT ./. chr1 11561037 . T . . LowGQX END=11562148 GT ./. chr1 11562733 . A . . LowGQX END=11562957 GT ./. chr1 11574445 . A . . LowGQX END=11574586 GT ./. chr1 11575393 . C . . LowGQX END=11575563 GT ./. chr1 11576056 . A . . LowGQX END=11576221 GT ./. chr1 11577518 . A . . LowGQX END=11577662 GT ./. chr1 11579410 . A . . LowGQX END=11579563 GT ./. chr1 11579774 . A . . LowGQX END=11579940 GT ./. chr1 11580742 . A . . LowGQX END=11580908 GT ./. chr1 11583997 . A . . LowGQX END=11584115 GT ./. chr1 11585231 . A . . LowGQX END=11585372 GT ./. chr1 11586706 . A . . LowGQX END=11586897 GT ./. chr1 11589611 . A . . LowGQX END=11589746 GT ./. chr1 11589842 . A . . LowGQX END=11590019 GT ./. chr1 11590962 . A . . LowGQX END=11591093 GT ./. chr1 11591580 . T . . LowGQX END=11591770 GT ./. chr1 11593818 . T . . LowGQX END=11593918 GT ./. chr1 11594415 . C . . LowGQX END=11594600 GT ./. chr1 11594879 . G . . LowGQX END=11594979 GT ./. chr1 11595066 . A . . LowGQX END=11595184 GT ./. chr1 11595533 . A . . LowGQX END=11595704 GT ./. chr1 11596379 . A . . LowGQX END=11596746 GT ./. chr1 11708749 . G . . LowGQX END=11708888 GT ./. chr1 11709142 . A . . LowGQX END=11709285 GT ./. chr1 11709829 . C . . LowGQX END=11709947 GT ./. chr1 11710000 . A . . LowGQX END=11710134 GT ./. chr1 11710510 . G . . LowGQX END=11710900 GT ./. chr1 11714277 . C . . LowGQX END=11714437 GT ./. chr1 11715891 . C . . LowGQX END=11715987 GT ./. chr1 11715988 . G . . LowGQX END=11716160;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 11718272 . A . . LowGQX END=11718501 GT ./. chr1 11718588 . A . . LowGQX END=11718688 GT ./. chr1 11718791 . A . . LowGQX END=11718931 GT ./. chr1 11721185 . A . . LowGQX END=11721365 GT ./. chr1 11728714 . C . . LowGQX END=11729004 GT ./. chr1 11731321 . A . . LowGQX END=11731452 GT ./. chr1 11731923 . G . . LowGQX END=11732083 GT ./. chr1 11733332 . A . . LowGQX END=11733472 GT ./. chr1 11733670 . A . . LowGQX END=11733911 GT ./. chr1 11734803 . T . . LowGQX END=11734804 GT ./. chr1 11734805 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 11734806 . G . . LowGQX . GT ./. chr1 11734807 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 11734808 . A . . LowGQX END=11734816 GT ./. chr1 11734817 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 11734818 . T . . LowGQX . GT ./. chr1 11734819 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 11734820 . G . . LowGQX END=11734821 GT ./. chr1 11734822 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 11734823 . G . . LowGQX . GT ./. chr1 11734824 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 11734825 . T . . LowGQX END=11734828 GT ./. chr1 11734829 . C . . LowGQX END=11734830;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 11734831 . C . . LowGQX END=11734835 GT ./. chr1 11734836 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 11734837 . T . . LowGQX . GT ./. chr1 11734838 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 11734839 . C . . LowGQX . GT ./. chr1 11734840 . C . . LowGQX END=11734846;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 11734847 . A . . LowGQX . GT ./. chr1 11734848 . G . . LowGQX END=11734855;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 11734856 . T . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 11734857 . T . . LowGQX END=11734863;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 11734864 . A . . LowGQX . GT ./. chr1 11734865 . A . . LowGQX END=11734866;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 11734867 . G . . LowGQX END=11734868 GT ./. chr1 11734869 . T . . LowGQX END=11734881;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 11734882 . C . . LowGQX . GT ./. chr1 11734883 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 11734884 . C . . LowGQX . GT ./. chr1 11734885 . A . . LowGQX END=11734889;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 11734890 . A . . LowGQX END=11734891 GT ./. chr1 11734892 . C . . LowGQX END=11734896;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 11734897 . A . . LowGQX END=11734899 GT ./. chr1 11734900 . G . . LowGQX END=11734902;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 11734903 . A . . LowGQX . GT ./. chr1 11735136 . C . . LowGQX END=11735236 GT ./. chr1 11735702 . C . . LowGQX END=11735802 GT ./. chr1 11735926 . G . . LowGQX END=11736200 GT ./. chr1 11736865 . C . . LowGQX END=11737045 GT ./. chr1 11737512 . T . . LowGQX END=11737702 GT ./. chr1 11740408 . A . . LowGQX END=11740661 GT ./. chr1 11766314 . C . . LowGQX END=11766769 GT ./. chr1 11769330 . A . . LowGQX END=11769525 GT ./. chr1 11771906 . A . . LowGQX END=11772025 GT ./. chr1 11772392 . C . . LowGQX END=11772492 GT ./. chr1 11775171 . G . . LowGQX END=11775271 GT ./. chr1 11779639 . A . . LowGQX END=11779756 GT ./. chr1 11796170 . G . . LowGQX END=11796330 GT ./. chr1 11804558 . A . . LowGQX END=11804658 GT ./. chr1 11805828 . A . . LowGQX END=11805928 GT ./. chr1 11806045 . G . . LowGQX END=11806172 GT ./. chr1 11806182 . A . . LowGQX END=11806283 GT ./. chr1 11807495 . A . . LowGQX END=11807605 GT ./. chr1 11808470 . A . . LowGQX END=11808670 GT ./. chr1 11810132 . A . . LowGQX END=11810344 GT ./. chr1 11821843 . C . . LowGQX END=11822332 GT ./. chr1 11824387 . G . . LowGQX END=11824540 GT ./. chr1 11825913 . G . . LowGQX END=11826634 GT ./. chr1 11826747 . C . . LowGQX END=11826847 GT ./. chr1 11826970 . G . . LowGQX END=11827143 GT ./. chr1 11827250 . A . . LowGQX END=11827350 GT ./. chr1 11828133 . G . . LowGQX END=11828377 GT ./. chr1 11831580 . G . . LowGQX END=11831694 GT ./. chr1 11832138 . G . . LowGQX END=11832317 GT ./. chr1 11835491 . G . . LowGQX END=11835668 GT ./. chr1 11836509 . A . . LowGQX END=11836696 GT ./. chr1 11838716 . G . . LowGQX END=11838874 GT ./. chr1 11838961 . G . . LowGQX END=11839138 GT ./. chr1 11839858 . G . . PASS END=11839884;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:8:12:60 chr1 11839885 . C . . LowGQX . GT:DP:GQX:MQ 0/0:8:9:60 chr1 11839886 . A . . PASS END=11839896;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:8:12:60 chr1 11839897 . G . . LowGQX END=11839907;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:6:60 chr1 11839908 . G . . LowGQX END=11839934;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 11839935 . C . . LowGQX END=11840068 GT ./. chr1 11842245 . G . . LowGQX END=11842391 GT ./. chr1 11844230 . G . . LowGQX END=11844651 GT ./. chr1 11845204 . G . . LowGQX END=11845347 GT ./. chr1 11847444 . G . . LowGQX END=11847551 GT ./. chr1 11847929 . G . . LowGQX END=11848105 GT ./. chr1 11848205 . G . . LowGQX END=11848436 GT ./. chr1 11848706 . A . . LowGQX END=11848806 GT ./. chr1 11849326 . G . . LowGQX END=11849517 GT ./. chr1 11850686 . G . . LowGQX END=11851007 GT ./. chr1 11851213 . T . . LowGQX END=11851435 GT ./. chr1 11852284 . T . . LowGQX END=11852488 GT ./. chr1 11853913 . C . . LowGQX END=11854198 GT ./. chr1 11854364 . T . . LowGQX END=11854647 GT ./. chr1 11854735 . C . . LowGQX END=11854972 GT ./. chr1 11855104 . C . . LowGQX END=11855457 GT ./. chr1 11856212 . T . . LowGQX END=11856508 GT ./. chr1 11860218 . T . . LowGQX END=11860431 GT ./. chr1 11861167 . G . . LowGQX END=11861508 GT ./. chr1 11862887 . T . . LowGQX END=11863258 GT ./. chr1 11863401 . G . . LowGQX END=11863620 GT ./. chr1 11866257 . A . . LowGQX END=11866468 GT ./. chr1 11867168 . C . . LowGQX END=11867268 GT ./. chr1 11875901 . A . . LowGQX END=11876014 GT ./. chr1 11876600 . G . . LowGQX END=11876755 GT ./. chr1 11879529 . C . . LowGQX END=11879629 GT ./. chr1 11880380 . G . . LowGQX END=11880480 GT ./. chr1 11882750 . A . . LowGQX END=11882861 GT ./. chr1 11883762 . A . . LowGQX END=11883893 GT ./. chr1 11884527 . T . . LowGQX END=11884627 GT ./. chr1 11886198 . T . . LowGQX END=11886298 GT ./. chr1 11887104 . G . . LowGQX END=11887281 GT ./. chr1 11888161 . A . . LowGQX END=11888279 GT ./. chr1 11888483 . T . . LowGQX END=11888684 GT ./. chr1 11889251 . A . . LowGQX END=11889382 GT ./. chr1 11893570 . A . . LowGQX END=11893698 GT ./. chr1 11893932 . A . . LowGQX END=11894122 GT ./. chr1 11894291 . A . . LowGQX END=11894455 GT ./. chr1 11894539 . A . . LowGQX END=11894650 GT ./. chr1 11896022 . A . . LowGQX END=11896213 GT ./. chr1 11897054 . A . . LowGQX END=11897216 GT ./. chr1 11897398 . A . . LowGQX END=11897559 GT ./. chr1 11898340 . C . . LowGQX END=11898502 GT ./. chr1 11898590 . A . . LowGQX END=11899051 GT ./. chr1 11900191 . T . . LowGQX END=11900291 GT ./. chr1 11906015 . T . . LowGQX END=11906139 GT ./. chr1 11907119 . G . . LowGQX END=11907548 GT ./. chr1 11907568 . A . . LowGQX END=11907793 GT ./. chr1 11917671 . T . . LowGQX END=11917771 GT ./. chr1 11918269 . A . . LowGQX END=11918529 GT ./. chr1 11918717 . A . . LowGQX END=11918893 GT ./. chr1 11980331 . T . . LowGQX END=11980431 GT ./. chr1 11982575 . A . . LowGQX END=11983549 GT ./. chr1 11985260 . A . . LowGQX END=11986303 GT ./. chr1 11994786 . C . . LowGQX END=11994964 GT ./. chr1 12004547 . A . . LowGQX END=12004720 GT ./. chr1 12007982 . T . . LowGQX END=12008176 GT ./. chr1 12009779 . G . . LowGQX END=12010015 GT ./. chr1 12010363 . G . . LowGQX END=12010629 GT ./. chr1 12012629 . G . . LowGQX END=12012844 GT ./. chr1 12014591 . G . . LowGQX END=12014691 GT ./. chr1 12014836 . G . . LowGQX END=12015002 GT ./. chr1 12016923 . G . . LowGQX END=12017123 GT ./. chr1 12017147 . T . . LowGQX END=12017251 GT ./. chr1 12017848 . A . . LowGQX END=12018052 GT ./. chr1 12018522 . A . . LowGQX END=12018756 GT ./. chr1 12020652 . G . . LowGQX END=12020876 GT ./. chr1 12023538 . A . . LowGQX END=12023745 GT ./. chr1 12024181 . T . . LowGQX END=12024409 GT ./. chr1 12024650 . C . . LowGQX END=12024894 GT ./. chr1 12025486 . G . . LowGQX END=12025702 GT ./. chr1 12026251 . C . . LowGQX END=12026425 GT ./. chr1 12026993 . A . . LowGQX END=12027200 GT ./. chr1 12030676 . C . . LowGQX END=12030925 GT ./. chr1 12032878 . T . . LowGQX END=12033106 GT ./. chr1 12034659 . G . . LowGQX END=12034917 GT ./. chr1 12049175 . C . . LowGQX END=12049452 GT ./. chr1 12052561 . T . . LowGQX END=12052799 GT ./. chr1 12056162 . A . . LowGQX END=12056427 GT ./. chr1 12057303 . C . . LowGQX END=12057530 GT ./. chr1 12058776 . A . . LowGQX END=12058987 GT ./. chr1 12058994 . G . . LowGQX END=12059204 GT ./. chr1 12061407 . G . . LowGQX END=12061663 GT ./. chr1 12061775 . T . . LowGQX END=12061945 GT ./. chr1 12061988 . T . . LowGQX END=12062212 GT ./. chr1 12063998 . T . . LowGQX END=12064227 GT ./. chr1 12064515 . G . . LowGQX END=12064722 GT ./. chr1 12064831 . A . . LowGQX END=12065036 GT ./. chr1 12065717 . G . . LowGQX END=12066040 GT ./. chr1 12066544 . A . . LowGQX END=12066802 GT ./. chr1 12067059 . G . . LowGQX END=12067358 GT ./. chr1 12069598 . T . . LowGQX END=12069835 GT ./. chr1 12071502 . A . . LowGQX END=12071674 GT ./. chr1 12073362 . G . . LowGQX END=12073468 GT ./. chr1 12081731 . T . . LowGQX END=12081900 GT ./. chr1 12082145 . T . . LowGQX END=12082502 GT ./. chr1 12082883 . T . . LowGQX END=12082983 GT ./. chr1 12089088 . A . . LowGQX END=12089201 GT ./. chr1 12089260 . C . . LowGQX END=12089360 GT ./. chr1 12089820 . A . . LowGQX END=12089954 GT ./. chr1 12090083 . A . . LowGQX END=12090184 GT ./. chr1 12091321 . A . . LowGQX END=12091463 GT ./. chr1 12091715 . T . . LowGQX END=12091875 GT ./. chr1 12123578 . C . . LowGQX END=12123738 GT ./. chr1 12144515 . T . . LowGQX END=12144615 GT ./. chr1 12157156 . A . . LowGQX END=12157277 GT ./. chr1 12164434 . A . . LowGQX END=12164591 GT ./. chr1 12169619 . G . . LowGQX END=12169719 GT ./. chr1 12170066 . A . . LowGQX END=12170264 GT ./. chr1 12171903 . G . . LowGQX END=12172074 GT ./. chr1 12175582 . C . . LowGQX END=12175789 GT ./. chr1 12183338 . C . . LowGQX END=12183438 GT ./. chr1 12183770 . A . . LowGQX END=12183887 GT ./. chr1 12186006 . A . . LowGQX END=12186112 GT ./. chr1 12186217 . C . . LowGQX END=12186317 GT ./. chr1 12195608 . G . . LowGQX END=12195708 GT ./. chr1 12198284 . A . . LowGQX END=12198496 GT ./. chr1 12202342 . A . . LowGQX END=12202591 GT ./. chr1 12227086 . G . . LowGQX END=12227239 GT ./. chr1 12227464 . T . . LowGQX END=12227624 GT ./. chr1 12248851 . A . . LowGQX END=12248955 GT ./. chr1 12251012 . A . . LowGQX . GT ./. chr1 12251013 . G . . LowGQX END=12251028;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 12251029 . T . . LowGQX . GT ./. chr1 12251030 . C . . LowGQX END=12251059;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 12251060 . T . . LowGQX END=12251084 GT ./. chr1 12251085 . A . . LowGQX END=12251129;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 12251130 . C . . LowGQX . GT ./. chr1 12251131 . G . . LowGQX END=12251138;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 12251139 . T . . LowGQX END=12251140 GT ./. chr1 12251141 . T . . LowGQX END=12251145;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 12251799 . C . . LowGQX END=12251983 GT ./. chr1 12252360 . T . . LowGQX END=12252460 GT ./. chr1 12252485 . A . . LowGQX END=12252585 GT ./. chr1 12252918 . A . . LowGQX END=12253158 GT ./. chr1 12253167 . G . . LowGQX END=12253267 GT ./. chr1 12254001 . T . . LowGQX END=12254101 GT ./. chr1 12254609 . A . . LowGQX END=12254709 GT ./. chr1 12262022 . A . . LowGQX END=12262231 GT ./. chr1 12266795 . A . . LowGQX END=12267080 GT ./. chr1 12294322 . T . . LowGQX END=12294423 GT ./. chr1 12302559 . T . . LowGQX END=12302659 GT ./. chr1 12304301 . A . . LowGQX END=12304496 GT ./. chr1 12304585 . T . . LowGQX END=12304685 GT ./. chr1 12309278 . A . . LowGQX END=12309399 GT ./. chr1 12313777 . A . . LowGQX END=12313886 GT ./. chr1 12316388 . A . . LowGQX END=12316563 GT ./. chr1 12317042 . A . . LowGQX END=12317147 GT ./. chr1 12317990 . A . . LowGQX END=12318163 GT ./. chr1 12320748 . A . . LowGQX END=12320854 GT ./. chr1 12321003 . A . . LowGQX END=12321209 GT ./. chr1 12321956 . A . . LowGQX END=12322140 GT ./. chr1 12326936 . A . . LowGQX END=12327071 GT ./. chr1 12327830 . A . . LowGQX END=12327990 GT ./. chr1 12328761 . A . . LowGQX END=12328936 GT ./. chr1 12331049 . A . . LowGQX END=12331184 GT ./. chr1 12333058 . A . . LowGQX END=12333195 GT ./. chr1 12335880 . A . . LowGQX END=12338098 GT ./. chr1 12339554 . A . . LowGQX END=12339710 GT ./. chr1 12342760 . A . . LowGQX END=12343796 GT ./. chr1 12348276 . C . . LowGQX END=12348376 GT ./. chr1 12351053 . A . . LowGQX END=12351184 GT ./. chr1 12353579 . A . . LowGQX END=12353764 GT ./. chr1 12359257 . A . . LowGQX END=12359444 GT ./. chr1 12364561 . A . . LowGQX END=12364788 GT ./. chr1 12368486 . A . . LowGQX END=12368701 GT ./. chr1 12371509 . A . . LowGQX END=12371685 GT ./. chr1 12371868 . A . . LowGQX END=12371985 GT ./. chr1 12374170 . A . . LowGQX END=12374387 GT ./. chr1 12378127 . A . . LowGQX END=12378397 GT ./. chr1 12379552 . A . . LowGQX END=12379690 GT ./. chr1 12381864 . A . . LowGQX END=12381968;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 12381969 . G . . LowGQX END=12382014 GT ./. chr1 12382015 . C . . LowGQX END=12382054;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 12382591 . A . . LowGQX END=12382806 GT ./. chr1 12383691 . T . . LowGQX END=12383851 GT ./. chr1 12387703 . A . . LowGQX END=12387914 GT ./. chr1 12389881 . T . . LowGQX END=12389981 GT ./. chr1 12393281 . A . . LowGQX END=12393426 GT ./. chr1 12395760 . A . . LowGQX END=12395950 GT ./. chr1 12398276 . C . . LowGQX END=12398376 GT ./. chr1 12401835 . A . . LowGQX END=12401945 GT ./. chr1 12402954 . A . . LowGQX END=12403111 GT ./. chr1 12405429 . A . . LowGQX END=12405569 GT ./. chr1 12406636 . A . . LowGQX END=12406736 GT ./. chr1 12408878 . A . . LowGQX END=12409033 GT ./. chr1 12409219 . A . . LowGQX END=12409434 GT ./. chr1 12414029 . A . . LowGQX END=12414281 GT ./. chr1 12415954 . A . . LowGQX END=12416150 GT ./. chr1 12416453 . A . . LowGQX END=12416584 GT ./. chr1 12418513 . A . . LowGQX END=12418660 GT ./. chr1 12422774 . A . . LowGQX END=12422909 GT ./. chr1 12423126 . A . . LowGQX END=12423306 GT ./. chr1 12428521 . A . . LowGQX END=12428649 GT ./. chr1 12429520 . A . . LowGQX END=12429760 GT ./. chr1 12433803 . A . . LowGQX END=12433962 GT ./. chr1 12438480 . A . . LowGQX END=12438648 GT ./. chr1 12439540 . A . . LowGQX END=12439653 GT ./. chr1 12443033 . A . . LowGQX END=12443217 GT ./. chr1 12445317 . A . . LowGQX END=12445435 GT ./. chr1 12446242 . A . . LowGQX END=12446396 GT ./. chr1 12460236 . A . . LowGQX END=12460390 GT ./. chr1 12461659 . A . . LowGQX END=12461760 GT ./. chr1 12463876 . A . . LowGQX END=12464029 GT ./. chr1 12469886 . A . . LowGQX END=12469986 GT ./. chr1 12475138 . A . . LowGQX END=12475277 GT ./. chr1 12476711 . A . . LowGQX END=12476883 GT ./. chr1 12516052 . A . . LowGQX END=12516189 GT ./. chr1 12520254 . A . . LowGQX END=12520454 GT ./. chr1 12538842 . T . . LowGQX END=12538942 GT ./. chr1 12557552 . A . . LowGQX END=12557688 GT ./. chr1 12566905 . A . . LowGQX END=12567150 GT ./. chr1 12567300 . G . . LowGQX END=12567452 GT ./. chr1 12568945 . A . . LowGQX END=12569081 GT ./. chr1 12628362 . C . . LowGQX END=12628462 GT ./. chr1 12632684 . C . . LowGQX END=12632884 GT ./. chr1 12638744 . A . . LowGQX END=12638987 GT ./. chr1 12639171 . C . . LowGQX END=12639443 GT ./. chr1 12640386 . C . . LowGQX END=12640697 GT ./. chr1 12677147 . A . . LowGQX END=12677356 GT ./. chr1 12704564 . A . . LowGQX END=12704736 GT ./. chr1 12711140 . A . . LowGQX END=12711361 GT ./. chr1 12721730 . T . . LowGQX END=12721884 GT ./. chr1 12725970 . A . . LowGQX END=12726749 GT ./. chr1 12776296 . C . . LowGQX END=12776396 GT ./. chr1 12779478 . G . . LowGQX END=12779696 GT ./. chr1 12780867 . A . . LowGQX END=12780967 GT ./. chr1 12785187 . A . . LowGQX END=12785966 GT ./. chr1 12806377 . A . . LowGQX END=12806492 GT ./. chr1 12815598 . A . . LowGQX END=12815766 GT ./. chr1 12819241 . A . . LowGQX END=12819552 GT ./. chr1 12820701 . A . . LowGQX END=12820887 GT ./. chr1 12835009 . G . . LowGQX END=12835300 GT ./. chr1 12835684 . A . . LowGQX END=12836264 GT ./. chr1 12837152 . A . . LowGQX END=12837745 GT ./. chr1 12853375 . G . . LowGQX END=12853666 GT ./. chr1 12854062 . A . . LowGQX END=12854645 GT ./. chr1 12854987 . T . . LowGQX END=12855119 GT ./. chr1 12855585 . A . . LowGQX END=12856157 GT ./. chr1 12884799 . T . . LowGQX END=12885362 GT ./. chr1 12887107 . C . . LowGQX END=12887690 GT ./. chr1 12888356 . C . . LowGQX END=12888678 GT ./. chr1 12907259 . G . . LowGQX END=12908145 GT ./. chr1 12918863 . G . . LowGQX END=12919154 GT ./. chr1 12919546 . A . . LowGQX END=12920129 GT ./. chr1 12921074 . A . . LowGQX END=12921637 GT ./. chr1 12939363 . A . . LowGQX END=12939932 GT ./. chr1 12941673 . A . . LowGQX END=12942259 GT ./. chr1 12942921 . A . . LowGQX END=12943218 GT ./. chr1 12952675 . G . . LowGQX END=12953375 GT ./. chr1 12954404 . C . . LowGQX END=12955004 GT ./. chr1 12955390 . A . . LowGQX END=12955681 GT ./. chr1 12977500 . C . . LowGQX END=12977810 GT ./. chr1 12978169 . C . . LowGQX END=12978769 GT ./. chr1 12979659 . T . . LowGQX END=12980239 GT ./. chr1 12998433 . C . . LowGQX END=12999133 GT ./. chr1 13000801 . C . . LowGQX END=13001401 GT ./. chr1 13002049 . T . . LowGQX END=13002359 GT ./. chr1 13035530 . T . . LowGQX END=13035840 GT ./. chr1 13036209 . A . . LowGQX END=13036809 GT ./. chr1 13037795 . T . . LowGQX END=13038385 GT ./. chr1 13052725 . T . . LowGQX END=13052998 GT ./. chr1 13108826 . A . . LowGQX END=13109406 GT ./. chr1 13111134 . A . . LowGQX END=13111734 GT ./. chr1 13112382 . G . . LowGQX END=13112682 GT ./. chr1 13182990 . C . . LowGQX END=13183873 GT ./. chr1 13216676 . A . . LowGQX END=13217256 GT ./. chr1 13218999 . C . . LowGQX END=13219582 GT ./. chr1 13328820 . T . . LowGQX END=13329409 GT ./. chr1 13330401 . C . . LowGQX END=13331001 GT ./. chr1 13331366 . T . . LowGQX END=13331676 GT ./. chr1 13364878 . C . . LowGQX END=13365188 GT ./. chr1 13365831 . T . . LowGQX END=13366431 GT ./. chr1 13368159 . T . . LowGQX END=13368739 GT ./. chr1 13386969 . T . . LowGQX END=13387549 GT ./. chr1 13388445 . C . . LowGQX END=13389045 GT ./. chr1 13389403 . T . . LowGQX END=13389713 GT ./. chr1 13423990 . T . . LowGQX END=13424300 GT ./. chr1 13424954 . T . . LowGQX END=13425554 GT ./. chr1 13427285 . T . . LowGQX END=13427865 GT ./. chr1 13448037 . A . . LowGQX END=13448614 GT ./. chr1 13449547 . G . . LowGQX END=13450147 GT ./. chr1 13450537 . T . . LowGQX END=13450847 GT ./. chr1 13474676 . T . . LowGQX END=13475265 GT ./. chr1 13476258 . C . . LowGQX END=13476858 GT ./. chr1 13477223 . T . . LowGQX END=13477533 GT ./. chr1 13495271 . G . . LowGQX END=13495581 GT ./. chr1 13495954 . A . . LowGQX END=13496554 GT ./. chr1 13497557 . T . . LowGQX END=13498137 GT ./. chr1 13521901 . T . . LowGQX END=13522331 GT ./. chr1 13523724 . T . . LowGQX END=13524324 GT ./. chr1 13526299 . T . . LowGQX END=13526879 GT ./. chr1 13607755 . G . . LowGQX END=13608335 GT ./. chr1 13609231 . A . . LowGQX END=13609821 GT ./. chr1 13610189 . G . . LowGQX END=13610489 GT ./. chr1 13644788 . C . . LowGQX END=13645098 GT ./. chr1 13645752 . A . . LowGQX END=13646352 GT ./. chr1 13648083 . C . . LowGQX END=13648663 GT ./. chr1 13668892 . A . . LowGQX END=13669472 GT ./. chr1 13670403 . A . . LowGQX END=13671003 GT ./. chr1 13671392 . T . . LowGQX END=13671702 GT ./. chr1 13695512 . T . . LowGQX END=13696101 GT ./. chr1 13697094 . C . . LowGQX END=13697694 GT ./. chr1 13698059 . T . . LowGQX END=13698359 GT ./. chr1 13716105 . G . . LowGQX END=13716415 GT ./. chr1 13716788 . A . . LowGQX END=13717388 GT ./. chr1 13718391 . T . . LowGQX END=13718971 GT ./. chr1 13742799 . C . . LowGQX END=13743109 GT ./. chr1 13744584 . T . . LowGQX END=13745184 GT ./. chr1 13747159 . T . . LowGQX END=13747739 GT ./. chr1 13802313 . C . . LowGQX END=13802568 GT ./. chr1 13839457 . C . . LowGQX END=13840092 GT ./. chr1 13910299 . A . . LowGQX END=13910598 GT ./. chr1 13910608 . G . . LowGQX END=13910708 GT ./. chr1 13912052 . A . . LowGQX END=13912152 GT ./. chr1 13922278 . C . . LowGQX END=13922378 GT ./. chr1 13933666 . A . . LowGQX END=13933804 GT ./. chr1 13936880 . A . . LowGQX END=13937014 GT ./. chr1 13940100 . G . . LowGQX END=13940252 GT ./. chr1 13940793 . A . . LowGQX END=13940909 GT ./. chr1 13941252 . A . . LowGQX END=13941412 GT ./. chr1 13942354 . C . . LowGQX END=13942454 GT ./. chr1 14042056 . T . . LowGQX END=14042156 GT ./. chr1 14049294 . A . . LowGQX END=14049394 GT ./. chr1 14057493 . A . . LowGQX END=14057615 GT ./. chr1 14059272 . A . . LowGQX END=14059432 GT ./. chr1 14068498 . A . . LowGQX END=14068655 GT ./. chr1 14075804 . C . . LowGQX END=14076024 GT ./. chr1 14096772 . G . . LowGQX END=14096872 GT ./. chr1 14099571 . A . . LowGQX END=14099686 GT ./. chr1 14104911 . A . . LowGQX END=14109329 GT ./. chr1 14109332 . C . . LowGQX END=14109486 GT ./. chr1 14109645 . C . . LowGQX END=14109745 GT ./. chr1 14112967 . T . . LowGQX END=14113067 GT ./. chr1 14142920 . A . . LowGQX END=14143066 GT ./. chr1 14149617 . C . . LowGQX END=14149717 GT ./. chr1 14220130 . C . . LowGQX END=14220252 GT ./. chr1 14506929 . G . . LowGQX END=14507088 GT ./. chr1 14925422 . C . . LowGQX END=14925736 GT ./. chr1 15250788 . G . . LowGQX END=15251138 GT ./. chr1 15287168 . C . . LowGQX END=15287374 GT ./. chr1 15361243 . A . . LowGQX END=15361384 GT ./. chr1 15370483 . A . . LowGQX END=15370658 GT ./. chr1 15382585 . A . . LowGQX END=15382779 GT ./. chr1 15386666 . A . . LowGQX END=15386801 GT ./. chr1 15390044 . C . . LowGQX END=15390144 GT ./. chr1 15392124 . A . . LowGQX END=15392296 GT ./. chr1 15420675 . G . . LowGQX END=15420882 GT ./. chr1 15421310 . G . . LowGQX END=15421430 GT ./. chr1 15428038 . G . . LowGQX END=15428271 GT ./. chr1 15429854 . G . . LowGQX END=15429957 GT ./. chr1 15430518 . G . . LowGQX END=15430686 GT ./. chr1 15438922 . G . . LowGQX END=15439038 GT ./. chr1 15440966 . G . . LowGQX END=15441132 GT ./. chr1 15490839 . T . . LowGQX END=15490958 GT ./. chr1 15494990 . A . . LowGQX END=15495274 GT ./. chr1 15497676 . C . . LowGQX END=15497776 GT ./. chr1 15541582 . A . . LowGQX END=15541930 GT ./. chr1 15545820 . A . . LowGQX END=15546242 GT ./. chr1 15573776 . G . . LowGQX END=15573935 GT ./. chr1 15578267 . G . . LowGQX END=15578374 GT ./. chr1 15598818 . G . . LowGQX END=15599026 GT ./. chr1 15615894 . G . . LowGQX END=15616163 GT ./. chr1 15623095 . A . . LowGQX END=15623290 GT ./. chr1 15627700 . G . . LowGQX END=15627938 GT ./. chr1 15632177 . G . . LowGQX END=15632337 GT ./. chr1 15635108 . G . . LowGQX END=15635233 GT ./. chr1 15639552 . G . . LowGQX END=15639684 GT ./. chr1 15642869 . C . . LowGQX END=15642969 GT ./. chr1 15644319 . G . . LowGQX END=15644425 GT ./. chr1 15650947 . G . . LowGQX END=15651056 GT ./. chr1 15653547 . T . . LowGQX END=15653647 GT ./. chr1 15654772 . G . . LowGQX END=15654926 GT ./. chr1 15655841 . G . . LowGQX END=15656073 GT ./. chr1 15665963 . T . . LowGQX END=15666063 GT ./. chr1 15668231 . G . . LowGQX END=15668390 GT ./. chr1 15671578 . G . . LowGQX END=15671687 GT ./. chr1 15671911 . G . . LowGQX END=15672020 GT ./. chr1 15675537 . G . . LowGQX END=15675646 GT ./. chr1 15679372 . G . . LowGQX END=15679481 GT ./. chr1 15684605 . G . . LowGQX END=15684795 GT ./. chr1 15686973 . G . . LowGQX END=15687200 GT ./. chr1 15689130 . T . . LowGQX END=15689230 GT ./. chr1 15690218 . T . . LowGQX END=15690318 GT ./. chr1 15692322 . G . . LowGQX END=15692430 GT ./. chr1 15693958 . G . . LowGQX END=15694119 GT ./. chr1 15695865 . G . . LowGQX END=15695999 GT ./. chr1 15700997 . G . . LowGQX END=15701128 GT ./. chr1 15702098 . G . . LowGQX END=15702227 GT ./. chr1 15707195 . A . . LowGQX END=15707295 GT ./. chr1 15707726 . G . . LowGQX END=15707948 GT ./. chr1 15708523 . G . . LowGQX END=15708690 GT ./. chr1 15709604 . A . . LowGQX END=15709704 GT ./. chr1 15710302 . G . . LowGQX END=15710427 GT ./. chr1 15714537 . T . . LowGQX END=15714637 GT ./. chr1 15714749 . C . . LowGQX END=15714909 GT ./. chr1 15717683 . T . . LowGQX END=15717783 GT ./. chr1 15723792 . G . . LowGQX END=15723910 GT ./. chr1 15736466 . C . . LowGQX END=15736786 GT ./. chr1 15752335 . T . . LowGQX END=15752517 GT ./. chr1 15753644 . A . . LowGQX END=15753783 GT ./. chr1 15754393 . G . . LowGQX END=15754506 GT ./. chr1 15755087 . A . . LowGQX END=15755223 GT ./. chr1 15764891 . A . . LowGQX END=15765052 GT ./. chr1 15766745 . C . . LowGQX END=15767138 GT ./. chr1 15768892 . G . . LowGQX END=15769120 GT ./. chr1 15769863 . T . . LowGQX END=15770102 GT ./. chr1 15771050 . T . . LowGQX END=15771298 GT ./. chr1 15772041 . A . . LowGQX END=15772296 GT ./. chr1 15773019 . C . . LowGQX END=15773169 GT ./. chr1 15783219 . C . . LowGQX END=15783319 GT ./. chr1 15783576 . C . . LowGQX END=15783676 GT ./. chr1 15788054 . A . . LowGQX END=15788156 GT ./. chr1 15788251 . C . . LowGQX END=15788351 GT ./. chr1 15788612 . A . . LowGQX END=15788712 GT ./. chr1 15789226 . A . . LowGQX END=15789359 GT ./. chr1 15789879 . A . . LowGQX END=15790020 GT ./. chr1 15792492 . A . . LowGQX END=15792642 GT ./. chr1 15793849 . C . . LowGQX END=15794036 GT ./. chr1 15798444 . G . . LowGQX END=15798544 GT ./. chr1 15802591 . C . . LowGQX END=15802691 GT ./. chr1 15802947 . C . . LowGQX END=15803047 GT ./. chr1 15807591 . A . . LowGQX END=15807693 GT ./. chr1 15808132 . A . . LowGQX END=15808245 GT ./. chr1 15808758 . A . . LowGQX END=15808891 GT ./. chr1 15809757 . A . . LowGQX END=15809898 GT ./. chr1 15812394 . A . . LowGQX END=15812544 GT ./. chr1 15813778 . A . . LowGQX END=15813935 GT ./. chr1 15817749 . T . . LowGQX END=15817849 GT ./. chr1 15819435 . G . . LowGQX END=15819535 GT ./. chr1 15820278 . T . . LowGQX END=15820499 GT ./. chr1 15821746 . C . . LowGQX END=15821950 GT ./. chr1 15831104 . A . . LowGQX END=15831256 GT ./. chr1 15832480 . C . . LowGQX END=15832580 GT ./. chr1 15833392 . A . . LowGQX END=15833573 GT ./. chr1 15833575 . C . . LowGQX END=15833675 GT ./. chr1 15834336 . G . . LowGQX END=15834436 GT ./. chr1 15844603 . A . . LowGQX END=15844893 GT ./. chr1 15850522 . G . . LowGQX END=15850742 GT ./. chr1 15855599 . A . . LowGQX END=15855770 GT ./. chr1 15860716 . C . . LowGQX END=15860816 GT ./. chr1 15862968 . A . . LowGQX END=15863312 GT ./. chr1 15870892 . A . . LowGQX END=15871081 GT ./. chr1 15873260 . A . . LowGQX END=15873369 GT ./. chr1 15874763 . A . . LowGQX END=15874926 GT ./. chr1 15886019 . A . . LowGQX END=15886154 GT ./. chr1 15888635 . A . . LowGQX END=15888823 GT ./. chr1 15890422 . A . . LowGQX END=15890609 GT ./. chr1 15890767 . T . . LowGQX END=15890867 GT ./. chr1 15892405 . T . . LowGQX END=15892505 GT ./. chr1 15892575 . A . . LowGQX END=15892686 GT ./. chr1 15893592 . A . . LowGQX END=15893767 GT ./. chr1 15894271 . A . . LowGQX END=15894675 GT ./. chr1 15900133 . A . . LowGQX END=15900233 GT ./. chr1 15901245 . T . . LowGQX END=15901345 GT ./. chr1 15904178 . A . . LowGQX END=15904362 GT ./. chr1 15905352 . A . . LowGQX END=15905552 GT ./. chr1 15906507 . T . . LowGQX END=15906664 GT ./. chr1 15909686 . A . . LowGQX END=15909893 GT ./. chr1 15911178 . C . . LowGQX END=15911468 GT ./. chr1 15944164 . C . . LowGQX END=15944306 GT ./. chr1 15953162 . A . . LowGQX END=15953296 GT ./. chr1 15956818 . A . . LowGQX END=15957059 GT ./. chr1 15959932 . A . . LowGQX END=15960065 GT ./. chr1 15960248 . A . . LowGQX END=15960348 GT ./. chr1 15964750 . T . . LowGQX END=15964932 GT ./. chr1 15970015 . A . . LowGQX END=15970148 GT ./. chr1 15976213 . A . . LowGQX END=15976321 GT ./. chr1 15978199 . A . . LowGQX END=15978393 GT ./. chr1 15983071 . T . . LowGQX END=15983171 GT ./. chr1 15986362 . G . . LowGQX END=15988220 GT ./. chr1 16007999 . C . . LowGQX END=16008099 GT ./. chr1 16010779 . C . . LowGQX END=16011119 GT ./. chr1 16042731 . G . . LowGQX END=16042839 GT ./. chr1 16043201 . G . . LowGQX END=16043312 GT ./. chr1 16044387 . G . . LowGQX END=16044488 GT ./. chr1 16045027 . T . . LowGQX END=16045127 GT ./. chr1 16046228 . G . . LowGQX END=16046416 GT ./. chr1 16047804 . T . . LowGQX END=16047904 GT ./. chr1 16051811 . G . . LowGQX END=16051921 GT ./. chr1 16051922 . G . . LowGQX END=16052041;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 16053508 . G . . LowGQX END=16054328 GT ./. chr1 16054559 . A . . LowGQX END=16054659 GT ./. chr1 16054757 . C . . LowGQX END=16054857 GT ./. chr1 16055146 . T . . LowGQX END=16055246 GT ./. chr1 16055591 . T . . LowGQX END=16055691 GT ./. chr1 16056291 . G . . LowGQX END=16056425 GT ./. chr1 16057026 . G . . LowGQX END=16057218 GT ./. chr1 16057670 . G . . LowGQX END=16057770 GT ./. chr1 16058383 . G . . LowGQX END=16058544 GT ./. chr1 16058844 . G . . LowGQX END=16059025 GT ./. chr1 16059106 . G . . LowGQX END=16059224 GT ./. chr1 16060291 . G . . LowGQX END=16060430 GT ./. chr1 16062979 . C . . LowGQX END=16063361 GT ./. chr1 16064407 . C . . LowGQX END=16064507 GT ./. chr1 16064586 . A . . LowGQX END=16064767 GT ./. chr1 16065047 . A . . LowGQX END=16065226 GT ./. chr1 16065697 . C . . LowGQX END=16065904 GT ./. chr1 16069049 . G . . LowGQX END=16069202 GT ./. chr1 16069317 . C . . LowGQX END=16069417 GT ./. chr1 16069513 . A . . LowGQX END=16069704 GT ./. chr1 16070653 . A . . LowGQX END=16071078 GT ./. chr1 16073360 . A . . LowGQX END=16073552 GT ./. chr1 16074035 . C . . LowGQX END=16074135 GT ./. chr1 16091477 . C . . LowGQX END=16091731 GT ./. chr1 16093858 . T . . LowGQX END=16094079 GT ./. chr1 16095021 . A . . LowGQX END=16095128 GT ./. chr1 16096902 . A . . LowGQX END=16097076 GT ./. chr1 16101111 . A . . LowGQX END=16101527 GT ./. chr1 16103663 . A . . LowGQX END=16103785 GT ./. chr1 16111041 . A . . LowGQX END=16111159 GT ./. chr1 16133868 . T . . LowGQX END=16134145 GT ./. chr1 16174501 . C . . LowGQX END=16174655 GT ./. chr1 16199309 . A . . LowGQX END=16199634 GT ./. chr1 16200609 . T . . LowGQX END=16200891 GT ./. chr1 16202695 . A . . LowGQX END=16203176 GT ./. chr1 16235814 . A . . LowGQX END=16235979 GT ./. chr1 16237594 . A . . LowGQX END=16237799 GT ./. chr1 16242621 . A . . LowGQX END=16242777 GT ./. chr1 16245419 . A . . LowGQX END=16245549 GT ./. chr1 16245897 . A . . LowGQX END=16246015 GT ./. chr1 16247363 . A . . LowGQX END=16247481 GT ./. chr1 16248692 . T . . LowGQX END=16248847 GT ./. chr1 16254584 . A . . LowGQX END=16262764 GT ./. chr1 16263656 . A . . LowGQX END=16264143 GT ./. chr1 16264295 . C . . LowGQX END=16264504 GT ./. chr1 16265211 . A . . LowGQX END=16265374 GT ./. chr1 16265789 . A . . LowGQX END=16265925 GT ./. chr1 16268462 . G . . LowGQX END=16268750 GT ./. chr1 16268824 . A . . LowGQX END=16268937 GT ./. chr1 16269022 . A . . LowGQX END=16269236 GT ./. chr1 16269557 . A . . LowGQX END=16269692 GT ./. chr1 16269892 . A . . LowGQX END=16270017 GT ./. chr1 16270092 . A . . LowGQX END=16270213 GT ./. chr1 16270297 . C . . LowGQX END=16270397 GT ./. chr1 16270446 . C . . LowGQX END=16271337 GT ./. chr1 16271430 . A . . LowGQX END=16271700 GT ./. chr1 16272168 . G . . LowGQX END=16272340 GT ./. chr1 16272458 . C . . LowGQX END=16272812 GT ./. chr1 16273428 . A . . LowGQX END=16273621 GT ./. chr1 16274649 . T . . LowGQX END=16274993 GT ./. chr1 16302432 . C . . LowGQX END=16302532 GT ./. chr1 16330790 . A . . LowGQX END=16330890 GT ./. chr1 16332412 . A . . LowGQX END=16332844 GT ./. chr1 16342062 . A . . LowGQX END=16342257 GT ./. chr1 16343567 . A . . LowGQX END=16343718 GT ./. chr1 16344241 . C . . LowGQX END=16344731 GT ./. chr1 16345628 . C . . LowGQX END=16345965 GT ./. chr1 16349064 . G . . LowGQX END=16349266 GT ./. chr1 16350244 . G . . LowGQX END=16350475 GT ./. chr1 16351207 . C . . LowGQX END=16351438 GT ./. chr1 16352552 . A . . LowGQX END=16352794 GT ./. chr1 16352980 . G . . LowGQX END=16353322 GT ./. chr1 16353754 . G . . LowGQX END=16353982 GT ./. chr1 16354256 . G . . LowGQX END=16354452 GT ./. chr1 16354462 . G . . LowGQX END=16354666 GT ./. chr1 16355100 . A . . LowGQX END=16355392 GT ./. chr1 16355548 . G . . LowGQX END=16355855 GT ./. chr1 16356175 . C . . LowGQX END=16356347 GT ./. chr1 16356409 . C . . LowGQX END=16356622 GT ./. chr1 16356905 . C . . LowGQX END=16357221 GT ./. chr1 16358154 . G . . LowGQX END=16358390 GT ./. chr1 16358647 . G . . LowGQX END=16358838 GT ./. chr1 16358887 . A . . LowGQX END=16359073 GT ./. chr1 16359614 . T . . LowGQX END=16359803 GT ./. chr1 16360055 . C . . LowGQX END=16360205 GT ./. chr1 16370937 . G . . LowGQX END=16371139 GT ./. chr1 16372002 . T . . LowGQX END=16372233 GT ./. chr1 16372979 . C . . LowGQX END=16373007 GT ./. chr1 16373008 . C . . LowGQX END=16373076;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 16373077 . T . . LowGQX . GT ./. chr1 16373078 . A . . LowGQX END=16373123;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 16373124 rs5257 A G 11.55 LowGQX;LowGQ DP=1;Dels=0.00;FS=0.000;HRun=2;HaplotypeScore=0.0000;MQ=60;MQ0=0;QD=11.55;SB=-0.01;TI=NM_000085;GI=CLCNKB;FC=Synonymous_S108S;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,1:1:3.01:41,3,0:60:3:1.000 chr1 16373125 . G . . LowGQX END=16373158;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 16373159 . G . . LowGQX END=16373210 GT ./. chr1 16374349 . A . . LowGQX END=16374591 GT ./. chr1 16374787 . A . . LowGQX END=16375129 GT ./. chr1 16375466 . C . . LowGQX END=16375792 GT ./. chr1 16376053 . G . . LowGQX END=16376249 GT ./. chr1 16376259 . G . . LowGQX END=16376463 GT ./. chr1 16376960 . T . . LowGQX END=16377147 GT ./. chr1 16377319 . G . . LowGQX END=16377383 GT ./. chr1 16377384 . G . . LowGQX END=16377497;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:49 chr1 16377498 . G . . LowGQX END=16377595 GT ./. chr1 16377922 . C . . LowGQX END=16378094 GT ./. chr1 16378154 . C . . LowGQX END=16378367 GT ./. chr1 16378642 . C . . LowGQX END=16378958 GT ./. chr1 16380083 . G . . LowGQX END=16380319 GT ./. chr1 16381879 . T . . LowGQX END=16382070 GT ./. chr1 16382119 . A . . LowGQX END=16382305 GT ./. chr1 16382866 . G . . LowGQX END=16383055 GT ./. chr1 16383313 . C . . LowGQX END=16383463 GT ./. chr1 16383681 . G . . LowGQX END=16383781 GT ./. chr1 16384919 . C . . LowGQX END=16385219 GT ./. chr1 16385987 . A . . LowGQX END=16386102 GT ./. chr1 16386351 . C . . LowGQX END=16386549 GT ./. chr1 16388531 . A . . LowGQX END=16388691 GT ./. chr1 16388962 . C . . LowGQX END=16389062 GT ./. chr1 16389973 . A . . LowGQX END=16390134 GT ./. chr1 16399817 . G . . LowGQX END=16399977 GT ./. chr1 16451659 . T . . LowGQX END=16451867 GT ./. chr1 16455878 . T . . LowGQX END=16456136 GT ./. chr1 16456660 . T . . LowGQX END=16456966 GT ./. chr1 16458165 . A . . LowGQX END=16458417 GT ./. chr1 16458508 . C . . LowGQX END=16458820 GT ./. chr1 16458822 . C . . LowGQX END=16458986 GT ./. chr1 16459624 . C . . LowGQX END=16459915 GT ./. chr1 16459925 . G . . LowGQX END=16460153 GT ./. chr1 16460304 . G . . LowGQX END=16460462 GT ./. chr1 16460912 . C . . LowGQX END=16461114 GT ./. chr1 16461480 . T . . LowGQX END=16461736 GT ./. chr1 16462067 . G . . LowGQX END=16462317 GT ./. chr1 16464297 . G . . LowGQX END=16464977 GT ./. chr1 16474822 . G . . LowGQX END=16475594 GT ./. chr1 16477340 . G . . LowGQX END=16477510 GT ./. chr1 16482232 . C . . LowGQX END=16482479 GT ./. chr1 16525080 . C . . LowGQX END=16525242 GT ./. chr1 16525643 . A . . LowGQX END=16525752 GT ./. chr1 16528267 . G . . LowGQX END=16528367 GT ./. chr1 16528909 . A . . LowGQX END=16529072 GT ./. chr1 16531252 . A . . LowGQX END=16531417 GT ./. chr1 16531577 . C . . LowGQX END=16531677 GT ./. chr1 16531774 . C . . LowGQX END=16531934 GT ./. chr1 16531991 . T . . LowGQX END=16532165 GT ./. chr1 16532424 . A . . LowGQX END=16532581 GT ./. chr1 16532673 . A . . LowGQX END=16533039 GT ./. chr1 16533430 . C . . LowGQX END=16533710 GT ./. chr1 16534006 . C . . LowGQX END=16534106 GT ./. chr1 16534168 . A . . LowGQX END=16534275 GT ./. chr1 16534437 . A . . LowGQX END=16534723 GT ./. chr1 16535126 . A . . LowGQX END=16535556 GT ./. chr1 16542377 . C . . LowGQX END=16542557 GT ./. chr1 16542963 . C . . LowGQX END=16543105 GT ./. chr1 16543589 . C . . LowGQX END=16543689 GT ./. chr1 16555367 . A . . LowGQX END=16555559 GT ./. chr1 16555958 . C . . LowGQX END=16556058 GT ./. chr1 16558541 . A . . LowGQX END=16558795 GT ./. chr1 16559003 . A . . LowGQX END=16559144 GT ./. chr1 16559386 . A . . LowGQX END=16559515 GT ./. chr1 16560105 . A . . LowGQX END=16560262 GT ./. chr1 16563124 . A . . LowGQX END=16563240 GT ./. chr1 16577163 . C . . LowGQX END=16578283 GT ./. chr1 16578781 . A . . LowGQX END=16578902 GT ./. chr1 16579578 . A . . LowGQX END=16579678 GT ./. chr1 16580128 . A . . LowGQX END=16580229 GT ./. chr1 16582204 . A . . LowGQX END=16582319 GT ./. chr1 16583099 . A . . LowGQX END=16583257 GT ./. chr1 16621267 . T . . LowGQX END=16621415 GT ./. chr1 16632296 . A . . LowGQX END=16632417 GT ./. chr1 16641662 . A . . LowGQX END=16641916 GT ./. chr1 16693669 . T . . LowGQX END=16693829 GT ./. chr1 16713745 . C . . LowGQX END=16713845 GT ./. chr1 16713997 . A . . LowGQX END=16714205 GT ./. chr1 16717845 . T . . LowGQX END=16717945 GT ./. chr1 16719721 . A . . LowGQX END=16719980 GT ./. chr1 16721531 . A . . LowGQX END=16721764 GT ./. chr1 16725179 . A . . LowGQX END=16725339 GT ./. chr1 16725837 . A . . LowGQX END=16726019 GT ./. chr1 16727213 . A . . LowGQX END=16727390 GT ./. chr1 16730170 . A . . LowGQX END=16730342 GT ./. chr1 16730449 . T . . LowGQX END=16730549 GT ./. chr1 16731460 . A . . LowGQX END=16731640 GT ./. chr1 16735606 . C . . LowGQX END=16735706 GT ./. chr1 16736094 . A . . LowGQX END=16736541 GT ./. chr1 16737201 . C . . LowGQX END=16737360 GT ./. chr1 16747979 . C . . LowGQX END=16748079 GT ./. chr1 16748387 . G . . LowGQX END=16748487 GT ./. chr1 16751591 . T . . LowGQX END=16751750 GT ./. chr1 16752018 . C . . LowGQX END=16752227 GT ./. chr1 16754358 . C . . LowGQX END=16754511 GT ./. chr1 16757737 . C . . LowGQX END=16757869 GT ./. chr1 16767253 . C . . LowGQX END=16767353 GT ./. chr1 16770125 . A . . LowGQX END=16770230 GT ./. chr1 16774363 . A . . LowGQX END=16774472 GT ./. chr1 16774546 . G . . LowGQX END=16774646 GT ./. chr1 16775586 . A . . LowGQX END=16775699 GT ./. chr1 16776617 . A . . LowGQX END=16776717 GT ./. chr1 16778320 . C . . LowGQX END=16778513 GT ./. chr1 16782289 . G . . LowGQX END=16782391 GT ./. chr1 16785265 . A . . LowGQX END=16785492 GT ./. chr1 16862279 . G . . LowGQX END=16862620 GT ./. chr1 16863273 . C . . LowGQX END=16863373 GT ./. chr1 16890437 . C . . LowGQX END=16890682 GT ./. chr1 16891301 . C . . LowGQX END=16891414 GT ./. chr1 16892127 . C . . LowGQX END=16892309 GT ./. chr1 16892381 . T . . LowGQX END=16892481 GT ./. chr1 16892517 . A . . LowGQX END=16892617 GT ./. chr1 16892657 . C . . LowGQX END=16892757 GT ./. chr1 16892848 . C . . LowGQX END=16892955 GT ./. chr1 16893673 . C . . LowGQX END=16893847 GT ./. chr1 16894450 . C . . LowGQX END=16894550 GT ./. chr1 16895567 . C . . LowGQX END=16895732 GT ./. chr1 16899553 . T . . LowGQX END=16899713 GT ./. chr1 16900981 . C . . LowGQX END=16901188 GT ./. chr1 16901638 . G . . LowGQX END=16901738 GT ./. chr1 16902761 . C . . LowGQX END=16902977 GT ./. chr1 16903811 . C . . LowGQX END=16903915 GT ./. chr1 16905687 . C . . LowGQX END=16905898 GT ./. chr1 16907239 . C . . LowGQX END=16907452 GT ./. chr1 16907901 . G . . LowGQX END=16908001 GT ./. chr1 16909038 . C . . LowGQX END=16909254 GT ./. chr1 16910088 . C . . LowGQX END=16910192 GT ./. chr1 16911983 . C . . LowGQX END=16912194 GT ./. chr1 16913544 . C . . LowGQX END=16913757 GT ./. chr1 16914206 . G . . LowGQX END=16914306 GT ./. chr1 16915308 . G . . LowGQX END=16915559 GT ./. chr1 16916393 . C . . LowGQX END=16916497 GT ./. chr1 16918341 . C . . LowGQX END=16918517 GT ./. chr1 16999486 . G . . LowGQX END=17000016 GT ./. chr1 17017703 . G . . LowGQX END=17017803 GT ./. chr1 17022926 . T . . LowGQX END=17023190 GT ./. chr1 17023274 . C . . LowGQX END=17023420 GT ./. chr1 17025910 . C . . LowGQX END=17026117 GT ./. chr1 17026354 . C . . LowGQX END=17026544 GT ./. chr1 17029196 . C . . LowGQX END=17029468 GT ./. chr1 17030438 . C . . LowGQX END=17030640 GT ./. chr1 17033783 . C . . LowGQX END=17034223 GT ./. chr1 17034387 . C . . LowGQX END=17034574 GT ./. chr1 17046449 . G . . LowGQX END=17046549 GT ./. chr1 17083726 . C . . LowGQX END=17083889 GT ./. chr1 17084012 . C . . LowGQX END=17084153 GT ./. chr1 17084248 . C . . LowGQX END=17084356 GT ./. chr1 17084436 . C . . LowGQX END=17084584 GT ./. chr1 17084700 . G . . LowGQX END=17084800 GT ./. chr1 17084960 . C . . LowGQX END=17085082 GT ./. chr1 17085139 . G . . LowGQX END=17085239 GT ./. chr1 17085297 . C . . LowGQX END=17085531 GT ./. chr1 17085560 . C . . LowGQX END=17085664 GT ./. chr1 17085763 . C . . LowGQX END=17085895 GT ./. chr1 17085970 . C . . LowGQX END=17086182 GT ./. chr1 17086342 . A . . LowGQX END=17086503 GT ./. chr1 17086605 . C . . LowGQX END=17086768 GT ./. chr1 17086848 . C . . LowGQX END=17086986 GT ./. chr1 17087063 . C . . LowGQX END=17087179 GT ./. chr1 17087245 . C . . LowGQX END=17087369 GT ./. chr1 17087449 . C . . LowGQX END=17087598 GT ./. chr1 17090838 . T . . LowGQX END=17090992 GT ./. chr1 17197551 . T . . LowGQX END=17197651 GT ./. chr1 17198292 . A . . LowGQX END=17198644 GT ./. chr1 17248434 . C . . LowGQX END=17248594 GT ./. chr1 17249156 . A . . LowGQX END=17249296 GT ./. chr1 17250818 . A . . LowGQX END=17250977 GT ./. chr1 17256339 . A . . LowGQX END=17256529 GT ./. chr1 17256611 . A . . LowGQX END=17256711 GT ./. chr1 17256762 . T . . LowGQX END=17256862 GT ./. chr1 17256922 . A . . LowGQX END=17257092 GT ./. chr1 17257784 . A . . LowGQX END=17257895 GT ./. chr1 17263130 . A . . LowGQX END=17263371 GT ./. chr1 17264134 . A . . LowGQX END=17264235 GT ./. chr1 17264887 . C . . LowGQX END=17264987 GT ./. chr1 17265332 . G . . LowGQX END=17265702 GT ./. chr1 17266387 . A . . LowGQX END=17266591 GT ./. chr1 17267267 . G . . LowGQX END=17267487 GT ./. chr1 17270593 . A . . LowGQX END=17270780 GT ./. chr1 17271924 . A . . LowGQX END=17272104 GT ./. chr1 17272752 . A . . LowGQX END=17272903 GT ./. chr1 17273254 . A . . LowGQX END=17273489 GT ./. chr1 17274824 . A . . LowGQX END=17275022 GT ./. chr1 17275292 . A . . LowGQX END=17275424 GT ./. chr1 17277446 . A . . LowGQX END=17277620 GT ./. chr1 17279795 . A . . LowGQX END=17279979 GT ./. chr1 17280716 . A . . LowGQX END=17280855 GT ./. chr1 17281227 . A . . LowGQX END=17281375 GT ./. chr1 17281777 . C . . LowGQX END=17282048 GT ./. chr1 17282460 . C . . LowGQX END=17282654 GT ./. chr1 17285056 . T . . LowGQX END=17285248 GT ./. chr1 17287242 . C . . LowGQX END=17287636 GT ./. chr1 17292216 . A . . LowGQX END=17292390 GT ./. chr1 17292492 . A . . LowGQX END=17292617 GT ./. chr1 17292901 . A . . LowGQX END=17293069 GT ./. chr1 17294661 . A . . LowGQX END=17294916 GT ./. chr1 17295517 . T . . LowGQX END=17295847 GT ./. chr1 17296248 . C . . LowGQX END=17296432 GT ./. chr1 17296746 . A . . LowGQX END=17296951 GT ./. chr1 17297129 . A . . LowGQX END=17297265 GT ./. chr1 17297938 . G . . LowGQX END=17298145 GT ./. chr1 17298793 . C . . LowGQX END=17298949 GT ./. chr1 17301413 . C . . LowGQX END=17301521 GT ./. chr1 17301751 . G . . LowGQX END=17301851 GT ./. chr1 17302076 . C . . LowGQX END=17302232 GT ./. chr1 17302969 . T . . LowGQX END=17303069 GT ./. chr1 17303197 . G . . LowGQX END=17303297 GT ./. chr1 17303356 . C . . LowGQX END=17303456 GT ./. chr1 17303599 . C . . LowGQX END=17303699 GT ./. chr1 17304701 . G . . LowGQX END=17304801 GT ./. chr1 17312479 . G . . LowGQX END=17312905 GT ./. chr1 17312907 . G . . LowGQX END=17313179 GT ./. chr1 17313249 . G . . LowGQX END=17313816 GT ./. chr1 17314582 . C . . LowGQX END=17315021 GT ./. chr1 17316135 . A . . LowGQX END=17316317 GT ./. chr1 17316331 . A . . LowGQX END=17316550 GT ./. chr1 17316571 . A . . LowGQX END=17316834 GT ./. chr1 17318178 . G . . LowGQX END=17318405 GT ./. chr1 17318453 . A . . LowGQX END=17318676 GT ./. chr1 17318687 . C . . LowGQX END=17319128 GT ./. chr1 17320073 . G . . LowGQX END=17320382 GT ./. chr1 17322354 . C . . LowGQX END=17323043 GT ./. chr1 17323464 . C . . LowGQX END=17323722 GT ./. chr1 17326435 . C . . LowGQX END=17327081 GT ./. chr1 17328472 . G . . LowGQX END=17328650 GT ./. chr1 17328740 . A . . LowGQX END=17328920 GT ./. chr1 17330776 . A . . LowGQX END=17330958 GT ./. chr1 17331136 . A . . LowGQX END=17331368 GT ./. chr1 17331458 . G . . LowGQX END=17331619 GT ./. chr1 17331818 . A . . LowGQX END=17332103 GT ./. chr1 17332128 . C . . LowGQX END=17332325 GT ./. chr1 17338089 . C . . LowGQX END=17338307 GT ./. chr1 17345325 . A . . LowGQX END=17345505 GT ./. chr1 17349052 . T . . LowGQX END=17349277 GT ./. chr1 17350417 . T . . LowGQX END=17350621 GT ./. chr1 17354193 . C . . LowGQX END=17354402 GT ./. chr1 17355044 . C . . LowGQX END=17355283 GT ./. chr1 17359504 . C . . LowGQX END=17359692 GT ./. chr1 17371205 . A . . LowGQX END=17371435 GT ./. chr1 17380389 . A . . LowGQX END=17380566 GT ./. chr1 17395537 . G . . LowGQX END=17395775 GT ./. chr1 17396581 . A . . LowGQX END=17396714 GT ./. chr1 17397894 . C . . LowGQX END=17397994 GT ./. chr1 17401348 . C . . LowGQX END=17401448 GT ./. chr1 17402172 . A . . LowGQX END=17402352 GT ./. chr1 17405754 . C . . LowGQX END=17405913 GT ./. chr1 17408984 . T . . LowGQX END=17409150 GT ./. chr1 17410219 . A . . LowGQX END=17410335 GT ./. chr1 17411092 . A . . LowGQX END=17411200 GT ./. chr1 17413014 . A . . LowGQX END=17413197 GT ./. chr1 17418901 . A . . LowGQX END=17419031 GT ./. chr1 17420060 . A . . LowGQX END=17420182 GT ./. chr1 17422385 . T . . LowGQX END=17422485 GT ./. chr1 17429469 . C . . LowGQX END=17429569 GT ./. chr1 17431371 . A . . LowGQX END=17431559 GT ./. chr1 17445771 . T . . LowGQX END=17445923 GT ./. chr1 17531709 . C . . LowGQX END=17531809 GT ./. chr1 17548783 . A . . LowGQX END=17548968 GT ./. chr1 17550103 . C . . LowGQX END=17550203 GT ./. chr1 17550843 . C . . LowGQX END=17550943 GT ./. chr1 17552304 . A . . LowGQX END=17552426 GT ./. chr1 17552526 . A . . LowGQX END=17552656 GT ./. chr1 17555098 . C . . LowGQX END=17555295 GT ./. chr1 17555385 . G . . LowGQX END=17555549 GT ./. chr1 17556578 . A . . LowGQX END=17556706 GT ./. chr1 17557065 . A . . LowGQX END=17557225 GT ./. chr1 17559312 . A . . LowGQX END=17559468 GT ./. chr1 17563807 . A . . LowGQX END=17563956 GT ./. chr1 17565108 . C . . LowGQX END=17565208 GT ./. chr1 17566189 . C . . LowGQX END=17566289 GT ./. chr1 17567128 . A . . LowGQX END=17567258 GT ./. chr1 17570503 . A . . LowGQX END=17571007 GT ./. chr1 17575629 . C . . LowGQX END=17575729 GT ./. chr1 17586071 . A . . LowGQX END=17586256 GT ./. chr1 17588556 . C . . LowGQX END=17588715 GT ./. chr1 17592135 . C . . LowGQX END=17592235 GT ./. chr1 17593212 . A . . LowGQX END=17593334 GT ./. chr1 17594330 . A . . LowGQX END=17594460 GT ./. chr1 17596726 . A . . LowGQX END=17596909 GT ./. chr1 17597372 . A . . LowGQX END=17597480 GT ./. chr1 17597560 . A . . LowGQX END=17597676 GT ./. chr1 17599833 . A . . LowGQX END=17599945 GT ./. chr1 17601128 . A . . LowGQX END=17601284 GT ./. chr1 17602942 . A . . LowGQX END=17603161 GT ./. chr1 17603217 . A . . LowGQX END=17603374 GT ./. chr1 17606835 . T . . LowGQX END=17606935 GT ./. chr1 17607164 . A . . LowGQX END=17607294 GT ./. chr1 17609339 . A . . LowGQX END=17609577 GT ./. chr1 17634714 . G . . LowGQX END=17634814 GT ./. chr1 17657462 . A . . LowGQX END=17657662 GT ./. chr1 17660422 . A . . LowGQX END=17660522 GT ./. chr1 17660793 . T . . LowGQX END=17661174 GT ./. chr1 17662638 . C . . LowGQX END=17662738 GT ./. chr1 17664531 . A . . LowGQX END=17664653 GT ./. chr1 17666181 . A . . LowGQX END=17666311 GT ./. chr1 17668436 . A . . LowGQX END=17668619 GT ./. chr1 17668792 . A . . LowGQX END=17668900 GT ./. chr1 17672521 . A . . LowGQX END=17672637 GT ./. chr1 17674434 . A . . LowGQX END=17674613 GT ./. chr1 17680996 . C . . LowGQX END=17681185 GT ./. chr1 17682436 . G . . LowGQX END=17682625 GT ./. chr1 17682850 . A . . LowGQX END=17682957 GT ./. chr1 17685261 . C . . LowGQX END=17685419 GT ./. chr1 17685773 . A . . LowGQX END=17685906 GT ./. chr1 17690015 . A . . LowGQX END=17690253 GT ./. chr1 17698740 . G . . LowGQX END=17698857 GT ./. chr1 17699550 . G . . LowGQX END=17699729 GT ./. chr1 17701908 . T . . LowGQX END=17702008 GT ./. chr1 17706399 . T . . LowGQX END=17706499 GT ./. chr1 17707541 . G . . LowGQX END=17707660 GT ./. chr1 17708411 . A . . LowGQX END=17708588 GT ./. chr1 17714875 . G . . LowGQX END=17715055 GT ./. chr1 17715271 . G . . LowGQX END=17715376 GT ./. chr1 17718608 . G . . LowGQX END=17718722 GT ./. chr1 17720470 . G . . LowGQX END=17720579 GT ./. chr1 17720795 . G . . LowGQX END=17720951 GT ./. chr1 17721446 . G . . LowGQX END=17721604 GT ./. chr1 17722035 . G . . LowGQX END=17722160 GT ./. chr1 17723552 . C . . LowGQX END=17723652 GT ./. chr1 17725181 . G . . LowGQX END=17725344 GT ./. chr1 17727700 . G . . LowGQX END=17727935 GT ./. chr1 17735584 . C . . LowGQX END=17735693 GT ./. chr1 17736459 . C . . LowGQX END=17736559 GT ./. chr1 17738546 . G . . LowGQX END=17738705 GT ./. chr1 17739567 . A . . LowGQX END=17739677 GT ./. chr1 17740011 . C . . LowGQX END=17740216 GT ./. chr1 17742974 . A . . LowGQX END=17743145 GT ./. chr1 17747208 . A . . LowGQX END=17747327 GT ./. chr1 17748694 . G . . LowGQX END=17748794 GT ./. chr1 17749199 . A . . LowGQX END=17749379 GT ./. chr1 17752035 . A . . LowGQX END=17752183 GT ./. chr1 17755599 . T . . LowGQX END=17755699 GT ./. chr1 17764713 . G . . LowGQX END=17765013 GT ./. chr1 17907060 . G . . LowGQX END=17907160 GT ./. chr1 17913953 . A . . LowGQX END=17914143 GT ./. chr1 17914908 . C . . LowGQX END=17915008 GT ./. chr1 17928618 . G . . LowGQX END=17928769 GT ./. chr1 17929995 . C . . LowGQX END=17930095 GT ./. chr1 17934284 . G . . LowGQX END=17934495 GT ./. chr1 17939551 . A . . LowGQX END=17939672 GT ./. chr1 17942565 . A . . LowGQX END=17942700 GT ./. chr1 17944827 . G . . LowGQX END=17945018 GT ./. chr1 17945782 . A . . LowGQX END=17945943 GT ./. chr1 17948348 . G . . LowGQX END=17948448 GT ./. chr1 17949489 . A . . LowGQX END=17949673 GT ./. chr1 17950880 . A . . LowGQX END=17951001 GT ./. chr1 17952448 . C . . LowGQX END=17952548 GT ./. chr1 17953823 . A . . LowGQX END=17954001 GT ./. chr1 17958814 . A . . LowGQX END=17958964 GT ./. chr1 17960941 . C . . LowGQX END=17961101 GT ./. chr1 17961328 . A . . LowGQX END=17961528 GT ./. chr1 17964381 . A . . LowGQX END=17964501 GT ./. chr1 17965055 . A . . LowGQX END=17965187 GT ./. chr1 17966288 . C . . LowGQX END=17966388 GT ./. chr1 17966695 . A . . LowGQX END=17966800 GT ./. chr1 17975047 . A . . LowGQX END=17975173 GT ./. chr1 17981125 . C . . LowGQX END=17981225 GT ./. chr1 17982372 . A . . LowGQX END=17982600 GT ./. chr1 17983047 . A . . LowGQX END=17983206 GT ./. chr1 17990910 . G . . LowGQX END=17991093 GT ./. chr1 18014046 . C . . LowGQX END=18014245 GT ./. chr1 18016233 . C . . LowGQX END=18016391 GT ./. chr1 18017582 . T . . LowGQX END=18017682 GT ./. chr1 18021397 . A . . LowGQX END=18021778 GT ./. chr1 18023341 . A . . LowGQX END=18023878 GT ./. chr1 18024093 . G . . LowGQX END=18024271 GT ./. chr1 18149502 . C . . LowGQX END=18149854 GT ./. chr1 18152260 . A . . LowGQX END=18153017 GT ./. chr1 18434548 . A . . LowGQX END=18434708 GT ./. chr1 18554390 . A . . LowGQX END=18554507 GT ./. chr1 18605309 . A . . LowGQX END=18605409 GT ./. chr1 18618358 . A . . LowGQX END=18618484 GT ./. chr1 18661384 . A . . LowGQX END=18661507 GT ./. chr1 18688607 . A . . LowGQX END=18688727 GT ./. chr1 18691715 . A . . LowGQX END=18692194 GT ./. chr1 18702797 . C . . LowGQX END=18702897 GT ./. chr1 18703292 . A . . LowGQX END=18703489 GT ./. chr1 18703805 . A . . LowGQX END=18703957 GT ./. chr1 18704736 . G . . LowGQX END=18704836 GT ./. chr1 18807474 . G . . LowGQX END=18809812 GT ./. chr1 18810462 . A . . LowGQX END=18810562 GT ./. chr1 18958091 . C . . LowGQX END=18958191 GT ./. chr1 18960795 . A . . LowGQX END=18961035 GT ./. chr1 18961603 . A . . LowGQX END=18961737 GT ./. chr1 18962729 . A . . LowGQX END=18962868 GT ./. chr1 19018246 . A . . LowGQX END=19018450 GT ./. chr1 19027145 . A . . LowGQX END=19027315 GT ./. chr1 19029586 . A . . LowGQX END=19029793 GT ./. chr1 19062124 . A . . LowGQX END=19062536 GT ./. chr1 19071256 . A . . LowGQX END=19071424 GT ./. chr1 19166080 . C . . LowGQX END=19167030 GT ./. chr1 19168221 . A . . LowGQX END=19168349 GT ./. chr1 19175833 . A . . LowGQX END=19176047 GT ./. chr1 19180705 . A . . LowGQX END=19181483 GT ./. chr1 19183823 . A . . LowGQX END=19184128 GT ./. chr1 19185971 . A . . LowGQX END=19186157 GT ./. chr1 19199288 . G . . LowGQX END=19199503 GT ./. chr1 19200906 . G . . LowGQX END=19201127 GT ./. chr1 19201825 . A . . LowGQX END=19202049 GT ./. chr1 19202758 . G . . LowGQX END=19203013 GT ./. chr1 19203651 . C . . LowGQX END=19203801 GT ./. chr1 19203859 . A . . LowGQX END=19204158 GT ./. chr1 19205743 . G . . LowGQX END=19205919 GT ./. chr1 19208143 . C . . LowGQX END=19208433 GT ./. chr1 19209072 . A . . LowGQX END=19209172 GT ./. chr1 19209562 . T . . LowGQX END=19209974 GT ./. chr1 19211916 . C . . LowGQX END=19212174 GT ./. chr1 19212907 . G . . LowGQX END=19213057 GT ./. chr1 19215805 . A . . LowGQX END=19216000 GT ./. chr1 19216455 . G . . LowGQX END=19216651 GT ./. chr1 19223554 . C . . LowGQX END=19223654 GT ./. chr1 19228845 . A . . LowGQX END=19229069 GT ./. chr1 19235054 . A . . LowGQX END=19235161 GT ./. chr1 19236835 . C . . LowGQX END=19236967 GT ./. chr1 19237874 . T . . LowGQX END=19238027 GT ./. chr1 19238456 . C . . LowGQX END=19238578 GT ./. chr1 19243396 . C . . LowGQX END=19243537 GT ./. chr1 19244855 . C . . LowGQX END=19244997 GT ./. chr1 19246170 . A . . LowGQX END=19246270 GT ./. chr1 19247535 . G . . LowGQX END=19247635 GT ./. chr1 19282150 . G . . LowGQX END=19282827 GT ./. chr1 19401309 . C . . LowGQX END=19401409 GT ./. chr1 19403191 . T . . LowGQX END=19403399 GT ./. chr1 19404260 . C . . LowGQX END=19404360 GT ./. chr1 19404466 . T . . LowGQX END=19404566 GT ./. chr1 19407841 . A . . LowGQX END=19408301 GT ./. chr1 19410996 . A . . LowGQX END=19411195 GT ./. chr1 19412637 . A . . LowGQX END=19412767 GT ./. chr1 19413171 . A . . LowGQX END=19413318 GT ./. chr1 19414308 . A . . LowGQX END=19414426 GT ./. chr1 19415251 . A . . LowGQX END=19415474 GT ./. chr1 19419311 . A . . LowGQX END=19419415 GT ./. chr1 19419805 . A . . LowGQX END=19419983 GT ./. chr1 19420441 . A . . LowGQX END=19420636 GT ./. chr1 19421398 . A . . LowGQX END=19421522 GT ./. chr1 19422037 . A . . LowGQX END=19422149 GT ./. chr1 19423015 . A . . LowGQX END=19423147 GT ./. chr1 19423681 . A . . LowGQX END=19423781 GT ./. chr1 19426082 . G . . LowGQX END=19426182 GT ./. chr1 19426868 . A . . LowGQX END=19427070 GT ./. chr1 19428012 . A . . LowGQX END=19428138 GT ./. chr1 19430576 . A . . LowGQX END=19430754 GT ./. chr1 19431070 . G . . LowGQX END=19431170 GT ./. chr1 19431540 . A . . LowGQX END=19431686 GT ./. chr1 19432225 . A . . LowGQX END=19432339 GT ./. chr1 19433061 . A . . LowGQX END=19433223 GT ./. chr1 19433329 . A . . LowGQX END=19433463 GT ./. chr1 19436588 . A . . LowGQX END=19436720 GT ./. chr1 19436867 . A . . LowGQX END=19436967 GT ./. chr1 19437172 . T . . LowGQX END=19437332 GT ./. chr1 19439016 . A . . LowGQX END=19439364 GT ./. chr1 19440191 . A . . LowGQX END=19440324 GT ./. chr1 19440372 . C . . LowGQX END=19440567 GT ./. chr1 19441303 . A . . LowGQX END=19441446 GT ./. chr1 19441890 . A . . LowGQX END=19442134 GT ./. chr1 19443713 . A . . LowGQX END=19443911 GT ./. chr1 19444311 . A . . LowGQX END=19444411 GT ./. chr1 19445359 . A . . LowGQX END=19445459 GT ./. chr1 19446049 . A . . LowGQX END=19446198 GT ./. chr1 19446672 . A . . LowGQX END=19446845 GT ./. chr1 19447681 . A . . LowGQX END=19447931 GT ./. chr1 19448418 . C . . LowGQX END=19448518 GT ./. chr1 19449325 . A . . LowGQX END=19449557 GT ./. chr1 19451033 . A . . LowGQX END=19451187 GT ./. chr1 19452938 . A . . LowGQX END=19453152 GT ./. chr1 19454115 . A . . LowGQX END=19454236 GT ./. chr1 19454703 . A . . LowGQX END=19454815 GT ./. chr1 19455470 . A . . LowGQX END=19455571 GT ./. chr1 19464499 . A . . LowGQX END=19464678 GT ./. chr1 19465575 . A . . LowGQX END=19465717 GT ./. chr1 19467280 . A . . LowGQX END=19467389 GT ./. chr1 19467828 . C . . LowGQX END=19468021 GT ./. chr1 19468139 . A . . LowGQX END=19468274 GT ./. chr1 19470472 . A . . LowGQX END=19470588 GT ./. chr1 19471278 . A . . LowGQX END=19471404 GT ./. chr1 19472285 . A . . LowGQX END=19472430 GT ./. chr1 19472509 . A . . LowGQX END=19472609 GT ./. chr1 19473318 . A . . LowGQX END=19473497 GT ./. chr1 19474485 . A . . LowGQX END=19474624 GT ./. chr1 19475039 . T . . LowGQX END=19475139 GT ./. chr1 19476223 . A . . LowGQX END=19476323 GT ./. chr1 19477069 . A . . LowGQX END=19477290 GT ./. chr1 19477982 . T . . LowGQX END=19478356 GT ./. chr1 19478805 . A . . LowGQX END=19478973 GT ./. chr1 19479793 . A . . LowGQX END=19479999 GT ./. chr1 19480260 . A . . LowGQX END=19480436 GT ./. chr1 19481410 . A . . LowGQX END=19481573 GT ./. chr1 19481933 . A . . LowGQX END=19482165 GT ./. chr1 19482763 . A . . LowGQX END=19482920 GT ./. chr1 19483259 . A . . LowGQX END=19483422 GT ./. chr1 19484307 . A . . LowGQX END=19484494 GT ./. chr1 19486603 . A . . LowGQX END=19486778 GT ./. chr1 19487409 . A . . LowGQX END=19487644 GT ./. chr1 19488081 . A . . LowGQX END=19488233 GT ./. chr1 19488307 . A . . LowGQX END=19488407 GT ./. chr1 19488912 . A . . LowGQX END=19489108 GT ./. chr1 19490186 . A . . LowGQX END=19490340 GT ./. chr1 19490745 . A . . LowGQX END=19490938 GT ./. chr1 19491291 . A . . LowGQX END=19491494 GT ./. chr1 19491741 . A . . LowGQX END=19491846 GT ./. chr1 19492148 . A . . LowGQX END=19492254 GT ./. chr1 19493514 . A . . LowGQX END=19493728 GT ./. chr1 19494519 . A . . LowGQX END=19494681 GT ./. chr1 19495927 . A . . LowGQX END=19496029 GT ./. chr1 19497254 . A . . LowGQX END=19497380 GT ./. chr1 19499356 . A . . LowGQX END=19499590 GT ./. chr1 19499673 . A . . LowGQX END=19499803 GT ./. chr1 19499931 . A . . LowGQX END=19500118 GT ./. chr1 19500811 . A . . LowGQX END=19500981 GT ./. chr1 19501438 . T . . LowGQX END=19501538 GT ./. chr1 19503084 . A . . LowGQX END=19503224 GT ./. chr1 19503953 . A . . LowGQX END=19504240 GT ./. chr1 19505493 . A . . LowGQX END=19505717 GT ./. chr1 19510298 . C . . LowGQX END=19510398 GT ./. chr1 19510508 . A . . LowGQX END=19510672 GT ./. chr1 19511580 . A . . LowGQX END=19511783 GT ./. chr1 19513032 . A . . LowGQX END=19513154 GT ./. chr1 19513656 . A . . LowGQX END=19513798 GT ./. chr1 19513933 . A . . LowGQX END=19514037 GT ./. chr1 19518680 . A . . LowGQX END=19518875 GT ./. chr1 19518955 . G . . LowGQX END=19519055 GT ./. chr1 19519925 . A . . LowGQX END=19520054 GT ./. chr1 19523633 . A . . LowGQX END=19523762 GT ./. chr1 19524162 . A . . LowGQX END=19524308 GT ./. chr1 19524439 . A . . LowGQX END=19524546 GT ./. chr1 19525033 . A . . LowGQX END=19525177 GT ./. chr1 19525291 . A . . LowGQX END=19525425 GT ./. chr1 19526143 . A . . LowGQX END=19526303 GT ./. chr1 19528210 . A . . LowGQX END=19528312 GT ./. chr1 19536554 . C . . LowGQX END=19536745 GT ./. chr1 19545795 . C . . LowGQX END=19545979 GT ./. chr1 19546061 . A . . LowGQX END=19546195 GT ./. chr1 19547251 . G . . LowGQX END=19547351 GT ./. chr1 19549081 . G . . LowGQX END=19549331 GT ./. chr1 19549888 . A . . LowGQX END=19550066 GT ./. chr1 19553805 . A . . LowGQX END=19553947 GT ./. chr1 19557336 . A . . LowGQX END=19557460 GT ./. chr1 19557753 . A . . LowGQX END=19557943 GT ./. chr1 19559116 . A . . LowGQX END=19559270 GT ./. chr1 19559428 . A . . LowGQX END=19559632 GT ./. chr1 19561622 . A . . LowGQX END=19561749 GT ./. chr1 19563634 . A . . LowGQX END=19563735 GT ./. chr1 19564509 . A . . LowGQX END=19564636 GT ./. chr1 19565271 . C . . LowGQX END=19565371 GT ./. chr1 19565711 . T . . LowGQX END=19565811 GT ./. chr1 19566280 . G . . LowGQX END=19566482 GT ./. chr1 19566789 . A . . LowGQX END=19566943 GT ./. chr1 19567508 . A . . LowGQX END=19567639 GT ./. chr1 19568837 . A . . LowGQX END=19568970 GT ./. chr1 19570105 . T . . LowGQX END=19570205 GT ./. chr1 19570427 . G . . LowGQX END=19570527 GT ./. chr1 19571391 . T . . LowGQX END=19571527 GT ./. chr1 19577907 . A . . LowGQX END=19578007 GT ./. chr1 19578294 . G . . LowGQX END=19578394 GT ./. chr1 19581196 . T . . LowGQX END=19581356 GT ./. chr1 19582440 . A . . LowGQX END=19582442;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 19582443 . T . . LowGQX END=19582548 GT ./. chr1 19583549 . G . . LowGQX END=19583649 GT ./. chr1 19583932 . C . . LowGQX END=19584032 GT ./. chr1 19584325 . A . . LowGQX END=19584481 GT ./. chr1 19584960 . C . . LowGQX END=19585060 GT ./. chr1 19585173 . A . . LowGQX END=19585327 GT ./. chr1 19593792 . G . . LowGQX END=19593958 GT ./. chr1 19595064 . A . . LowGQX END=19595198 GT ./. chr1 19595765 . C . . LowGQX END=19595866 GT ./. chr1 19596075 . A . . LowGQX END=19596175 GT ./. chr1 19596943 . A . . LowGQX END=19597052 GT ./. chr1 19597240 . A . . LowGQX END=19597430 GT ./. chr1 19600354 . C . . LowGQX END=19600569 GT ./. chr1 19609223 . G . . LowGQX END=19609389 GT ./. chr1 19610488 . A . . LowGQX END=19610622 GT ./. chr1 19611178 . A . . LowGQX END=19611282 GT ./. chr1 19611510 . A . . LowGQX END=19611611 GT ./. chr1 19612380 . A . . LowGQX END=19612489 GT ./. chr1 19612677 . A . . LowGQX END=19612869 GT ./. chr1 19614988 . A . . LowGQX END=19615206 GT ./. chr1 19630668 . A . . LowGQX END=19630932 GT ./. chr1 19632461 . C . . LowGQX END=19632693 GT ./. chr1 19633445 . A . . LowGQX END=19633647 GT ./. chr1 19633757 . C . . LowGQX END=19633956 GT ./. chr1 19634566 . G . . LowGQX END=19634808 GT ./. chr1 19634898 . G . . LowGQX END=19635188 GT ./. chr1 19638270 . G . . LowGQX END=19638670 GT ./. chr1 19644170 . C . . LowGQX END=19644338 GT ./. chr1 19651125 . A . . LowGQX END=19651259 GT ./. chr1 19651983 . T . . LowGQX END=19652083 GT ./. chr1 19652737 . A . . LowGQX END=19652884 GT ./. chr1 19653022 . C . . LowGQX END=19653122 GT ./. chr1 19653708 . C . . LowGQX END=19653909 GT ./. chr1 19654039 . C . . LowGQX END=19654139 GT ./. chr1 19654992 . C . . LowGQX END=19655152 GT ./. chr1 19666018 . A . . LowGQX END=19666118 GT ./. chr1 19669255 . C . . LowGQX END=19669359 GT ./. chr1 19670841 . T . . LowGQX END=19670941 GT ./. chr1 19671664 . G . . LowGQX END=19671764 GT ./. chr1 19683077 . T . . LowGQX END=19683248 GT ./. chr1 19683914 . A . . LowGQX END=19684060 GT ./. chr1 19705032 . A . . LowGQX END=19705150 GT ./. chr1 19711997 . A . . LowGQX END=19712123 GT ./. chr1 19712170 . A . . LowGQX END=19712270 GT ./. chr1 19746150 . C . . LowGQX END=19746250 GT ./. chr1 19775318 . T . . LowGQX END=19775418 GT ./. chr1 19810683 . C . . LowGQX END=19810893 GT ./. chr1 19811822 . T . . LowGQX END=19811982 GT ./. chr1 19923462 . T . . LowGQX END=19923678 GT ./. chr1 19927404 . A . . LowGQX END=19927504 GT ./. chr1 19934608 . A . . LowGQX END=19935118 GT ./. chr1 19948568 . A . . LowGQX END=19948668 GT ./. chr1 19949966 . A . . LowGQX END=19950080 GT ./. chr1 19951885 . G . . LowGQX END=19952087 GT ./. chr1 19952839 . T . . LowGQX END=19952939 GT ./. chr1 19969799 . A . . LowGQX END=19969899 GT ./. chr1 19972436 . G . . LowGQX END=19972536 GT ./. chr1 19981503 . A . . LowGQX END=19981696 GT ./. chr1 19981815 . A . . LowGQX END=19981931 GT ./. chr1 19983357 . A . . LowGQX END=19983625 GT ./. chr1 19992234 . A . . LowGQX END=19992963 GT ./. chr1 20005028 . T . . LowGQX END=20005066;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 20005067 . G . . LowGQX . GT ./. chr1 20005068 . G . . LowGQX END=20005074;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 20005075 . C . . LowGQX . GT ./. chr1 20005076 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 20005077 . C . . LowGQX END=20005078 GT ./. chr1 20005079 . C . . LowGQX END=20005084;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 20005085 . T . . LowGQX END=20005086 GT ./. chr1 20005087 . G . . LowGQX END=20005089;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 20005090 . T . . LowGQX . GT ./. chr1 20005091 . C . . LowGQX END=20005109;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 20005110 . A . . LowGQX . GT ./. chr1 20005111 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 20005112 . C . . LowGQX END=20005113 GT ./. chr1 20005114 . A . . LowGQX END=20005121;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 20005122 . C . . LowGQX . GT ./. chr1 20005123 . A . . LowGQX END=20005126;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 20005127 . G . . LowGQX . GT ./. chr1 20005128 . G . . LowGQX END=20005132;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 20005133 . C . . LowGQX END=20005134 GT ./. chr1 20005135 . C . . LowGQX END=20005142;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 20005143 . C . . LowGQX END=20005144 GT ./. chr1 20005145 . G . . LowGQX END=20005153;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 20005154 . T . . LowGQX . GT ./. chr1 20005155 . G . . LowGQX END=20005160;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 20005161 . C . . LowGQX . GT ./. chr1 20005162 . C . . LowGQX END=20005164;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 20005165 . C . . LowGQX . GT ./. chr1 20005166 . T . . LowGQX END=20005168;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 20005169 . G . . LowGQX END=20005170 GT ./. chr1 20005171 . A . . LowGQX END=20005176;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 20005177 . T . . LowGQX END=20005221 GT ./. chr1 20005410 . A . . LowGQX END=20005864 GT ./. chr1 20009115 . C . . LowGQX END=20009215 GT ./. chr1 20009519 . G . . LowGQX END=20009943 GT ./. chr1 20020925 . A . . LowGQX END=20021047 GT ./. chr1 20027259 . A . . LowGQX END=20027381 GT ./. chr1 20063858 . T . . LowGQX END=20063958 GT ./. chr1 20066315 . A . . LowGQX END=20066456 GT ./. chr1 20067268 . A . . LowGQX END=20067437 GT ./. chr1 20071957 . C . . LowGQX END=20072147 GT ./. chr1 20072907 . G . . LowGQX END=20073095 GT ./. chr1 20073654 . A . . LowGQX END=20073756 GT ./. chr1 20082125 . A . . LowGQX END=20082262 GT ./. chr1 20096939 . G . . LowGQX END=20097099 GT ./. chr1 20097799 . A . . LowGQX END=20097978 GT ./. chr1 20107071 . A . . LowGQX END=20107254 GT ./. chr1 20140909 . A . . LowGQX END=20141597 GT ./. chr1 20208934 . C . . LowGQX END=20209294 GT ./. chr1 20216876 . A . . LowGQX END=20217029 GT ./. chr1 20220859 . A . . LowGQX END=20220976 GT ./. chr1 20224031 . A . . LowGQX END=20224158 GT ./. chr1 20230758 . A . . LowGQX END=20230894 GT ./. chr1 20231382 . A . . LowGQX END=20231483 GT ./. chr1 20232923 . A . . LowGQX END=20233112 GT ./. chr1 20234061 . A . . LowGQX END=20234242 GT ./. chr1 20246798 . C . . LowGQX END=20246945 GT ./. chr1 20248789 . A . . LowGQX END=20248900 GT ./. chr1 20249108 . A . . LowGQX END=20249251 GT ./. chr1 20249983 . A . . LowGQX END=20250083 GT ./. chr1 20302143 . T . . LowGQX END=20302388 GT ./. chr1 20304457 . A . . LowGQX END=20304666 GT ./. chr1 20304822 . G . . LowGQX END=20305069 GT ./. chr1 20305176 . T . . LowGQX END=20305318 GT ./. chr1 20395435 . G . . LowGQX END=20395535 GT ./. chr1 20411290 . T . . LowGQX END=20411390 GT ./. chr1 20412574 . A . . LowGQX END=20412723 GT ./. chr1 20416226 . G . . LowGQX END=20416391 GT ./. chr1 20417059 . A . . LowGQX END=20417188 GT ./. chr1 20440605 . T . . LowGQX END=20440755 GT ./. chr1 20441998 . A . . LowGQX END=20442109 GT ./. chr1 20442824 . A . . LowGQX END=20442973 GT ./. chr1 20445922 . T . . LowGQX END=20446022 GT ./. chr1 20465869 . C . . LowGQX END=20466039 GT ./. chr1 20466636 . C . . LowGQX END=20466736 GT ./. chr1 20469937 . A . . LowGQX END=20470086 GT ./. chr1 20471071 . A . . LowGQX END=20471185 GT ./. chr1 20474681 . A . . LowGQX END=20474897 GT ./. chr1 20490483 . C . . LowGQX END=20490651 GT ./. chr1 20499286 . C . . LowGQX END=20499391 GT ./. chr1 20501499 . C . . LowGQX END=20501688 GT ./. chr1 20503727 . T . . LowGQX END=20503887 GT ./. chr1 20517053 . C . . LowGQX END=20517900 GT ./. chr1 20637094 . G . . LowGQX END=20637234 GT ./. chr1 20639328 . G . . LowGQX END=20639482 GT ./. chr1 20640814 . G . . LowGQX END=20641086 GT ./. chr1 20644022 . G . . LowGQX END=20644169 GT ./. chr1 20644917 . G . . LowGQX END=20645215 GT ./. chr1 20645874 . G . . LowGQX END=20646000 GT ./. chr1 20649848 . G . . LowGQX END=20650026 GT ./. chr1 20654382 . G . . LowGQX END=20654494 GT ./. chr1 20656672 . G . . LowGQX END=20656876 GT ./. chr1 20657300 . A . . LowGQX END=20657477 GT ./. chr1 20659258 . G . . LowGQX END=20659445 GT ./. chr1 20662795 . G . . LowGQX END=20662980 GT ./. chr1 20664138 . G . . LowGQX END=20664330 GT ./. chr1 20664448 . C . . LowGQX END=20664548 GT ./. chr1 20668913 . T . . LowGQX END=20669103 GT ./. chr1 20669571 . G . . LowGQX END=20669887 GT ./. chr1 20671908 . T . . LowGQX END=20672087 GT ./. chr1 20674737 . G . . LowGQX END=20674870 GT ./. chr1 20675590 . G . . LowGQX END=20675767 GT ./. chr1 20676636 . T . . LowGQX END=20676736 GT ./. chr1 20677279 . C . . LowGQX END=20677435 GT ./. chr1 20678547 . G . . LowGQX END=20678666 GT ./. chr1 20680249 . G . . LowGQX END=20680757 GT ./. chr1 20810128 . T . . LowGQX END=20810228 GT ./. chr1 20811675 . G . . LowGQX END=20811875 GT ./. chr1 20827181 . T . . LowGQX END=20827915 GT ./. chr1 20828560 . A . . LowGQX END=20828685 GT ./. chr1 20829709 . A . . LowGQX END=20829809 GT ./. chr1 20834396 . A . . LowGQX END=20834520 GT ./. chr1 20879465 . C . . LowGQX END=20880459 GT ./. chr1 20915572 . T . . LowGQX END=20915828 GT ./. chr1 20931370 . A . . LowGQX END=20931584 GT ./. chr1 20940274 . T . . LowGQX END=20940444 GT ./. chr1 20944894 . A . . LowGQX END=20945113 GT ./. chr1 20959991 . C . . LowGQX END=20960480 GT ./. chr1 20964284 . T . . LowGQX END=20964674 GT ./. chr1 20966334 . T . . LowGQX END=20966537 GT ./. chr1 20970932 . G . . LowGQX END=20971217 GT ./. chr1 20971984 . A . . LowGQX END=20972268 GT ./. chr1 20974947 . T . . LowGQX END=20975177 GT ./. chr1 20975437 . A . . LowGQX END=20975776 GT ./. chr1 20976876 . T . . LowGQX END=20977236 GT ./. chr1 20978870 . C . . LowGQX END=20979024 GT ./. chr1 20979112 . A . . LowGQX END=20979223 GT ./. chr1 20979342 . A . . LowGQX END=20979467 GT ./. chr1 20980118 . A . . LowGQX END=20980270 GT ./. chr1 20980714 . A . . LowGQX END=20980867 GT ./. chr1 20981104 . T . . LowGQX END=20981204 GT ./. chr1 20981931 . A . . LowGQX END=20982031 GT ./. chr1 20982167 . A . . LowGQX END=20982275 GT ./. chr1 20982588 . A . . LowGQX END=20982688 GT ./. chr1 20987372 . A . . LowGQX END=20987487 GT ./. chr1 20987688 . A . . LowGQX END=20987897 GT ./. chr1 20991026 . G . . LowGQX END=20991307 GT ./. chr1 20992656 . A . . LowGQX END=20992876 GT ./. chr1 20996863 . G . . LowGQX END=20997036 GT ./. chr1 20998380 . G . . LowGQX END=20998741 GT ./. chr1 21009095 . T . . LowGQX END=21009429 GT ./. chr1 21011251 . C . . LowGQX END=21011701 GT ./. chr1 21012488 . G . . LowGQX END=21012671 GT ./. chr1 21013830 . C . . LowGQX END=21014489 GT ./. chr1 21016630 . A . . LowGQX END=21016880 GT ./. chr1 21024821 . G . . LowGQX END=21025033 GT ./. chr1 21030889 . G . . LowGQX END=21031444 GT ./. chr1 21036081 . G . . LowGQX END=21036373 GT ./. chr1 21039896 . G . . LowGQX END=21040100 GT ./. chr1 21041935 . T . . LowGQX END=21042184 GT ./. chr1 21043918 . G . . LowGQX END=21044251 GT ./. chr1 21048283 . T . . LowGQX END=21048491 GT ./. chr1 21049247 . A . . LowGQX END=21049411 GT ./. chr1 21050117 . A . . LowGQX END=21050230 GT ./. chr1 21050574 . A . . LowGQX END=21050747 GT ./. chr1 21050887 . A . . LowGQX END=21051131 GT ./. chr1 21052411 . A . . LowGQX END=21052560 GT ./. chr1 21053481 . C . . LowGQX END=21053581 GT ./. chr1 21053962 . C . . LowGQX END=21054097 GT ./. chr1 21054384 . A . . LowGQX END=21054544 GT ./. chr1 21071288 . A . . LowGQX END=21071587 GT ./. chr1 21072034 . A . . LowGQX END=21072152 GT ./. chr1 21074035 . A . . LowGQX END=21074151 GT ./. chr1 21076214 . A . . LowGQX END=21076378 GT ./. chr1 21081821 . G . . LowGQX END=21081921 GT ./. chr1 21083655 . T . . LowGQX END=21083807 GT ./. chr1 21091868 . A . . LowGQX END=21092058 GT ./. chr1 21094015 . G . . LowGQX END=21094168 GT ./. chr1 21097421 . A . . LowGQX END=21097601 GT ./. chr1 21099942 . G . . LowGQX END=21100106 GT ./. chr1 21102423 . C . . LowGQX END=21102523 GT ./. chr1 21103088 . A . . LowGQX END=21103246 GT ./. chr1 21106303 . A . . LowGQX END=21106407 GT ./. chr1 21106836 . A . . LowGQX END=21106936 GT ./. chr1 21133810 . T . . LowGQX END=21133996 GT ./. chr1 21137229 . A . . LowGQX END=21137380 GT ./. chr1 21139642 . G . . LowGQX END=21139742 GT ./. chr1 21143883 . A . . LowGQX END=21144034 GT ./. chr1 21151591 . A . . LowGQX END=21151694 GT ./. chr1 21154101 . A . . LowGQX END=21154201 GT ./. chr1 21155638 . A . . LowGQX END=21155808 GT ./. chr1 21167347 . A . . LowGQX END=21167524 GT ./. chr1 21174258 . T . . LowGQX END=21174358 GT ./. chr1 21175906 . A . . LowGQX END=21176026 GT ./. chr1 21177749 . A . . LowGQX END=21177974 GT ./. chr1 21180051 . A . . LowGQX END=21180173 GT ./. chr1 21181468 . T . . LowGQX END=21181568 GT ./. chr1 21183894 . A . . LowGQX END=21183994 GT ./. chr1 21186876 . A . . LowGQX END=21187013 GT ./. chr1 21188719 . A . . LowGQX END=21188828 GT ./. chr1 21190967 . A . . LowGQX END=21191208 GT ./. chr1 21191607 . A . . LowGQX END=21191758 GT ./. chr1 21205814 . A . . LowGQX END=21206016 GT ./. chr1 21212692 . A . . LowGQX END=21212867 GT ./. chr1 21219057 . G . . LowGQX END=21219223 GT ./. chr1 21219979 . A . . LowGQX END=21220132 GT ./. chr1 21221859 . A . . LowGQX END=21221997 GT ./. chr1 21226188 . A . . LowGQX END=21226439 GT ./. chr1 21231371 . C . . LowGQX END=21231471 GT ./. chr1 21267751 . C . . LowGQX END=21267889 GT ./. chr1 21267982 . A . . LowGQX END=21268826 GT ./. chr1 21276433 . C . . LowGQX END=21276607 GT ./. chr1 21295965 . A . . LowGQX END=21296092 GT ./. chr1 21299493 . A . . LowGQX END=21299653 GT ./. chr1 21306765 . C . . LowGQX END=21306994 GT ./. chr1 21307539 . A . . LowGQX END=21307738 GT ./. chr1 21308841 . T . . LowGQX END=21308941 GT ./. chr1 21324000 . A . . LowGQX END=21324160 GT ./. chr1 21325287 . T . . LowGQX END=21325387 GT ./. chr1 21325798 . G . . LowGQX END=21325898 GT ./. chr1 21326170 . A . . LowGQX END=21326270 GT ./. chr1 21327692 . A . . LowGQX END=21327806 GT ./. chr1 21329201 . C . . LowGQX END=21329302 GT ./. chr1 21377298 . A . . LowGQX END=21377537 GT ./. chr1 21415619 . T . . LowGQX END=21415719 GT ./. chr1 21437796 . T . . LowGQX END=21437896 GT ./. chr1 21494488 . C . . LowGQX END=21494588 GT ./. chr1 21502656 . T . . LowGQX END=21502852 GT ./. chr1 21503154 . G . . LowGQX END=21503373 GT ./. chr1 21546397 . C . . LowGQX END=21546676 GT ./. chr1 21548189 . A . . LowGQX END=21548387 GT ./. chr1 21551692 . T . . LowGQX END=21551985 GT ./. chr1 21553601 . A . . LowGQX END=21553771 GT ./. chr1 21554373 . G . . LowGQX END=21554586 GT ./. chr1 21559999 . T . . LowGQX END=21560206 GT ./. chr1 21562292 . T . . LowGQX END=21562472 GT ./. chr1 21563188 . T . . LowGQX END=21563389 GT ./. chr1 21564576 . G . . LowGQX END=21564789 GT ./. chr1 21571431 . C . . LowGQX END=21571648 GT ./. chr1 21573663 . A . . LowGQX END=21573908 GT ./. chr1 21582389 . C . . LowGQX END=21582683 GT ./. chr1 21583967 . G . . LowGQX END=21584135 GT ./. chr1 21585135 . G . . LowGQX END=21585384 GT ./. chr1 21586713 . G . . LowGQX END=21586937 GT ./. chr1 21599141 . T . . LowGQX END=21599456 GT ./. chr1 21605633 . A . . LowGQX END=21605928 GT ./. chr1 21616452 . G . . LowGQX END=21616741 GT ./. chr1 21616746 . G . . LowGQX END=21616959 GT ./. chr1 21625265 . G . . LowGQX END=21625365 GT ./. chr1 21671760 . G . . LowGQX END=21671920 GT ./. chr1 21771538 . C . . LowGQX END=21771715 GT ./. chr1 21795179 . A . . LowGQX END=21795393 GT ./. chr1 21797067 . G . . LowGQX END=21797230 GT ./. chr1 21798060 . A . . LowGQX END=21798279 GT ./. chr1 21799263 . G . . LowGQX END=21799423 GT ./. chr1 21799871 . A . . LowGQX END=21800081 GT ./. chr1 21801369 . C . . LowGQX END=21801469 GT ./. chr1 21804561 . G . . LowGQX END=21804803 GT ./. chr1 21805818 . G . . LowGQX END=21805918 GT ./. chr1 21806542 . A . . LowGQX END=21806719 GT ./. chr1 21807399 . T . . LowGQX END=21807499 GT ./. chr1 21808077 . T . . LowGQX END=21808298 GT ./. chr1 21808893 . C . . LowGQX END=21809053 GT ./. chr1 21809623 . T . . LowGQX END=21809882 GT ./. chr1 21880524 . C . . LowGQX END=21880687 GT ./. chr1 21887068 . G . . LowGQX END=21887290 GT ./. chr1 21887539 . G . . LowGQX END=21887757 GT ./. chr1 21889552 . C . . LowGQX END=21889829 GT ./. chr1 21890483 . G . . LowGQX END=21890761 GT ./. chr1 21894546 . C . . LowGQX END=21894792 GT ./. chr1 21896731 . C . . LowGQX END=21896919 GT ./. chr1 21900107 . T . . LowGQX END=21900344 GT ./. chr1 21902175 . A . . LowGQX END=21902469 GT ./. chr1 21902964 . C . . LowGQX END=21903186 GT ./. chr1 21903825 . C . . LowGQX END=21904193 GT ./. chr1 21924168 . C . . LowGQX END=21924268 GT ./. chr1 21924396 . A . . LowGQX END=21924560 GT ./. chr1 21924891 . A . . LowGQX END=21924998 GT ./. chr1 21925985 . A . . LowGQX END=21926113 GT ./. chr1 21928175 . A . . LowGQX END=21928293 GT ./. chr1 21929295 . A . . LowGQX END=21929409 GT ./. chr1 21929983 . G . . LowGQX END=21930406 GT ./. chr1 21932557 . A . . LowGQX END=21932693 GT ./. chr1 21934704 . A . . LowGQX END=21934846 GT ./. chr1 21935337 . C . . LowGQX END=21935437 GT ./. chr1 21935996 . G . . LowGQX END=21936154 GT ./. chr1 21936611 . A . . LowGQX END=21936771 GT ./. chr1 21937943 . A . . LowGQX END=21938077 GT ./. chr1 21938207 . A . . LowGQX END=21938312 GT ./. chr1 21938511 . G . . LowGQX END=21938611 GT ./. chr1 21939632 . C . . LowGQX END=21939732 GT ./. chr1 21940111 . G . . LowGQX END=21940211 GT ./. chr1 21940477 . A . . LowGQX END=21940585 GT ./. chr1 21943797 . A . . LowGQX END=21943987 GT ./. chr1 21944397 . A . . LowGQX END=21944497 GT ./. chr1 21945492 . G . . LowGQX END=21945592 GT ./. chr1 21946475 . G . . LowGQX END=21946575 GT ./. chr1 21948760 . C . . LowGQX END=21948919 GT ./. chr1 21952794 . T . . LowGQX END=21952894 GT ./. chr1 21953385 . T . . LowGQX END=21953485 GT ./. chr1 21961214 . T . . LowGQX END=21961314 GT ./. chr1 21976222 . C . . LowGQX END=21976322 GT ./. chr1 21977884 . C . . LowGQX END=21978163 GT ./. chr1 21978184 . A . . LowGQX END=21978344 GT ./. chr1 21991704 . C . . LowGQX END=21991811 GT ./. chr1 21995665 . C . . LowGQX END=21995825 GT ./. chr1 22005818 . A . . LowGQX END=22005972 GT ./. chr1 22007209 . A . . LowGQX END=22007365 GT ./. chr1 22013644 . A . . LowGQX END=22013744 GT ./. chr1 22016465 . A . . LowGQX END=22016595 GT ./. chr1 22021557 . A . . LowGQX END=22021717 GT ./. chr1 22027989 . A . . LowGQX END=22028098 GT ./. chr1 22030003 . A . . LowGQX END=22030114 GT ./. chr1 22030753 . A . . LowGQX END=22030888 GT ./. chr1 22032218 . A . . LowGQX END=22032333 GT ./. chr1 22032600 . A . . LowGQX END=22032700 GT ./. chr1 22032958 . A . . LowGQX END=22033085 GT ./. chr1 22033235 . A . . LowGQX END=22033401 GT ./. chr1 22041810 . A . . LowGQX END=22041967 GT ./. chr1 22047527 . A . . LowGQX END=22047662 GT ./. chr1 22048141 . A . . LowGQX END=22048260 GT ./. chr1 22050389 . A . . LowGQX END=22050656 GT ./. chr1 22055054 . C . . LowGQX END=22055215 GT ./. chr1 22056195 . A . . LowGQX END=22056328 GT ./. chr1 22059126 . A . . LowGQX END=22059226 GT ./. chr1 22062912 . A . . LowGQX END=22063121 GT ./. chr1 22073552 . A . . LowGQX END=22073652 GT ./. chr1 22074629 . A . . LowGQX END=22074767 GT ./. chr1 22077998 . A . . LowGQX END=22078111 GT ./. chr1 22078968 . G . . LowGQX END=22079147 GT ./. chr1 22079443 . T . . LowGQX END=22079615 GT ./. chr1 22082967 . C . . LowGQX END=22083226 GT ./. chr1 22084154 . A . . LowGQX END=22084279 GT ./. chr1 22109315 . A . . LowGQX END=22109453 GT ./. chr1 22138938 . A . . LowGQX END=22139038 GT ./. chr1 22140889 . A . . LowGQX END=22141319 GT ./. chr1 22142434 . A . . LowGQX END=22142570 GT ./. chr1 22147941 . A . . LowGQX END=22148107 GT ./. chr1 22148652 . T . . LowGQX END=22148752 GT ./. chr1 22149758 . C . . LowGQX END=22150033 GT ./. chr1 22150058 . C . . LowGQX END=22150264 GT ./. chr1 22150563 . C . . LowGQX END=22150921 GT ./. chr1 22150979 . C . . LowGQX END=22151324 GT ./. chr1 22154305 . G . . LowGQX END=22154464 GT ./. chr1 22154472 . C . . LowGQX END=22154971 GT ./. chr1 22155277 . C . . LowGQX END=22155624 GT ./. chr1 22155825 . G . . LowGQX END=22156149 GT ./. chr1 22156435 . C . . LowGQX END=22156636 GT ./. chr1 22157424 . A . . LowGQX END=22157635 GT ./. chr1 22157657 . G . . LowGQX END=22157869 GT ./. chr1 22157905 . C . . LowGQX END=22158341 GT ./. chr1 22158937 . C . . LowGQX END=22159151 GT ./. chr1 22159710 . A . . LowGQX END=22160159 GT ./. chr1 22160258 . T . . LowGQX END=22160470 GT ./. chr1 22161121 . A . . LowGQX END=22161548 GT ./. chr1 22161982 . T . . LowGQX END=22162182 GT ./. chr1 22163244 . G . . LowGQX END=22163551 GT ./. chr1 22165267 . A . . LowGQX END=22165630 GT ./. chr1 22165813 . G . . LowGQX END=22166095 GT ./. chr1 22166264 . C . . LowGQX END=22166562 GT ./. chr1 22167543 . G . . LowGQX END=22167830 GT ./. chr1 22167981 . G . . LowGQX END=22168218 GT ./. chr1 22168444 . C . . LowGQX END=22168925 GT ./. chr1 22169212 . G . . LowGQX END=22169466 GT ./. chr1 22169739 . A . . LowGQX END=22169983 GT ./. chr1 22170590 . A . . LowGQX END=22170844 GT ./. chr1 22172550 . T . . LowGQX END=22172800 GT ./. chr1 22172890 . C . . LowGQX END=22173144 GT ./. chr1 22173796 . C . . LowGQX END=22174037 GT ./. chr1 22174131 . C . . LowGQX END=22174151 GT ./. chr1 22174152 . C . . LowGQX END=22174211;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 22174212 . C . . LowGQX END=22174638 GT ./. chr1 22175085 . T . . LowGQX END=22175576 GT ./. chr1 22176483 . T . . LowGQX END=22176737 GT ./. chr1 22176805 . G . . LowGQX END=22177043 GT ./. chr1 22177988 . A . . LowGQX END=22178471 GT ./. chr1 22178530 . T . . LowGQX END=22178778 GT ./. chr1 22179142 . C . . LowGQX END=22179615 GT ./. chr1 22180065 . T . . LowGQX END=22180165 GT ./. chr1 22180275 . A . . LowGQX END=22180375 GT ./. chr1 22180635 . C . . LowGQX END=22180888 GT ./. chr1 22181053 . C . . LowGQX END=22181528 GT ./. chr1 22181746 . T . . LowGQX END=22182220 GT ./. chr1 22182229 . C . . LowGQX END=22182457 GT ./. chr1 22183457 . G . . LowGQX END=22183930 GT ./. chr1 22186008 . C . . LowGQX END=22186221 GT ./. chr1 22186277 . C . . LowGQX END=22186547 GT ./. chr1 22186619 . G . . LowGQX END=22186780 GT ./. chr1 22188199 . G . . LowGQX END=22188388 GT ./. chr1 22188430 . A . . LowGQX END=22188660 GT ./. chr1 22190542 . A . . LowGQX END=22190758 GT ./. chr1 22191285 . G . . LowGQX END=22191618 GT ./. chr1 22191727 . A . . LowGQX END=22191910 GT ./. chr1 22192159 . T . . LowGQX END=22192354 GT ./. chr1 22198628 . G . . LowGQX END=22198922 GT ./. chr1 22199062 . A . . LowGQX END=22199305 GT ./. chr1 22199352 . C . . LowGQX END=22199636 GT ./. chr1 22199817 . C . . LowGQX END=22199969 GT ./. chr1 22200367 . C . . LowGQX END=22200556 GT ./. chr1 22200848 . G . . LowGQX END=22201274 GT ./. chr1 22201333 . G . . LowGQX END=22201547 GT ./. chr1 22202071 . T . . LowGQX END=22202292 GT ./. chr1 22202305 . A . . LowGQX END=22202587 GT ./. chr1 22202671 . G . . LowGQX END=22202950 GT ./. chr1 22202954 . T . . LowGQX END=22203130 GT ./. chr1 22203131 . C . . LowGQX END=22203197;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 22204628 . C . . LowGQX END=22204629;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:5:9:60 chr1 22204630 rs7513608 G A 4.25 LowGQX BaseQRankSum=0.731;DP=5;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;MQ=60;MQ0=0;MQRankSum=-0.731;QD=0.85;ReadPosRankSum=0.731;SB=-0.01;TI=NM_005529;GI=HSPG2;FC=Silent GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:4,1:5:32.20:32,0,81:60:4:0.200 chr1 22204631 . T . . LowGQX END=22204717;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:6:60 chr1 22204718 . A . . LowGQX END=22204739;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 22204740 . T . . LowGQX . GT ./. chr1 22204741 . C . . LowGQX END=22204747;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 22204748 . T . . LowGQX END=22204798 GT ./. chr1 22204832 . G . . LowGQX END=22205208 GT ./. chr1 22205436 . C . . LowGQX END=22205666 GT ./. chr1 22206549 . C . . LowGQX END=22206799 GT ./. chr1 22206805 . C . . LowGQX END=22207380 GT ./. chr1 22207781 . G . . LowGQX END=22208047 GT ./. chr1 22210970 . A . . LowGQX END=22211702 GT ./. chr1 22211762 . C . . LowGQX END=22211996 GT ./. chr1 22213657 . A . . LowGQX END=22214219 GT ./. chr1 22214380 . C . . LowGQX END=22214611 GT ./. chr1 22215138 . C . . LowGQX END=22215238 GT ./. chr1 22216375 . A . . LowGQX END=22216686 GT ./. chr1 22216869 . C . . LowGQX END=22217239 GT ./. chr1 22222364 . G . . LowGQX END=22222511 GT ./. chr1 22222617 . C . . LowGQX END=22222855 GT ./. chr1 22263539 . C . . LowGQX END=22263757 GT ./. chr1 22303505 . G . . LowGQX END=22303605 GT ./. chr1 22304328 . A . . LowGQX END=22304485 GT ./. chr1 22304855 . C . . LowGQX END=22304925;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 22304926 . C . . LowGQX END=22304955 GT ./. chr1 22307315 . A . . LowGQX END=22307417 GT ./. chr1 22307529 . A . . LowGQX END=22307668 GT ./. chr1 22310185 . A . . LowGQX END=22310326 GT ./. chr1 22310680 . A . . LowGQX END=22310827 GT ./. chr1 22313022 . A . . LowGQX END=22313179 GT ./. chr1 22315714 . T . . LowGQX END=22315814 GT ./. chr1 22324612 . C . . LowGQX END=22324712 GT ./. chr1 22328140 . G . . LowGQX END=22328240 GT ./. chr1 22328962 . A . . LowGQX END=22329119 GT ./. chr1 22329489 . C . . LowGQX END=22329589 GT ./. chr1 22331938 . A . . LowGQX END=22332040 GT ./. chr1 22332153 . A . . LowGQX END=22332294 GT ./. chr1 22333369 . A . . LowGQX END=22333510 GT ./. chr1 22333864 . A . . LowGQX END=22334011 GT ./. chr1 22336166 . C . . LowGQX END=22336353 GT ./. chr1 22336514 . A . . LowGQX END=22336674 GT ./. chr1 22338842 . C . . LowGQX END=22339002 GT ./. chr1 22404970 . C . . LowGQX END=22405079 GT ./. chr1 22405198 . G . . LowGQX END=22405375 GT ./. chr1 22408202 . T . . LowGQX END=22408302 GT ./. chr1 22412930 . A . . LowGQX END=22413044 GT ./. chr1 22413160 . A . . LowGQX END=22413362 GT ./. chr1 22416431 . T . . LowGQX END=22416531 GT ./. chr1 22417916 . T . . LowGQX END=22418016 GT ./. chr1 22446492 . C . . LowGQX END=22447062 GT ./. chr1 22447653 . C . . LowGQX END=22448121 GT ./. chr1 22453759 . C . . LowGQX END=22453975 GT ./. chr1 22456058 . C . . LowGQX END=22456396 GT ./. chr1 22469228 . G . . LowGQX END=22469467 GT ./. chr1 22816391 . C . . LowGQX END=22817190 GT ./. chr1 22817842 . T . . LowGQX END=22818078 GT ./. chr1 22827934 . A . . LowGQX END=22828229 GT ./. chr1 22828741 . T . . LowGQX END=22828986 GT ./. chr1 22832491 . A . . LowGQX END=22832786 GT ./. chr1 22834443 . G . . LowGQX END=22834682 GT ./. chr1 22834972 . G . . LowGQX END=22835276 GT ./. chr1 22835542 . A . . LowGQX END=22835778 GT ./. chr1 22837621 . G . . LowGQX END=22837892 GT ./. chr1 22838118 . C . . LowGQX END=22838679 GT ./. chr1 22839366 . A . . LowGQX END=22839675 GT ./. chr1 22843742 . A . . LowGQX END=22844009 GT ./. chr1 22846503 . G . . LowGQX END=22846820 GT ./. chr1 22847938 . T . . LowGQX END=22848203 GT ./. chr1 22848819 . G . . LowGQX END=22849008 GT ./. chr1 22850660 . A . . LowGQX END=22850989 GT ./. chr1 22852644 . G . . LowGQX END=22852941 GT ./. chr1 22890126 . G . . LowGQX END=22890277 GT ./. chr1 22895705 . T . . LowGQX END=22895865 GT ./. chr1 22902708 . A . . LowGQX END=22903376 GT ./. chr1 22912971 . A . . LowGQX END=22913131 GT ./. chr1 22915362 . A . . LowGQX END=22915875 GT ./. chr1 22919817 . A . . LowGQX END=22919946 GT ./. chr1 22920015 . A . . LowGQX END=22920182 GT ./. chr1 22921720 . C . . LowGQX END=22921820 GT ./. chr1 22922583 . G . . LowGQX END=22922683 GT ./. chr1 22923803 . A . . LowGQX END=22923972 GT ./. chr1 22924167 . A . . LowGQX END=22924357 GT ./. chr1 22924572 . T . . LowGQX END=22924725 GT ./. chr1 22925329 . A . . LowGQX END=22925543 GT ./. chr1 22927131 . C . . LowGQX END=22927306 GT ./. chr1 22927389 . A . . LowGQX END=22927584 GT ./. chr1 22927780 . C . . LowGQX END=22927991 GT ./. chr1 22928077 . A . . LowGQX END=22928288 GT ./. chr1 22964059 . G . . LowGQX END=22964324 GT ./. chr1 22965275 . G . . LowGQX END=22966007 GT ./. chr1 22970466 . A . . LowGQX END=22970749 GT ./. chr1 22973669 . T . . LowGQX END=22974328 GT ./. chr1 22985899 . A . . LowGQX END=22986188 GT ./. chr1 22987254 . C . . LowGQX END=22987931 GT ./. chr1 23037396 . C . . LowGQX END=23037556 GT ./. chr1 23101666 . A . . LowGQX END=23101766 GT ./. chr1 23107863 . G . . LowGQX END=23108030 GT ./. chr1 23110834 . G . . LowGQX END=23111621 GT ./. chr1 23189479 . C . . LowGQX END=23189737 GT ./. chr1 23191319 . G . . LowGQX END=23191757 GT ./. chr1 23208801 . G . . LowGQX END=23209028 GT ./. chr1 23217582 . A . . LowGQX END=23217682 GT ./. chr1 23219263 . C . . LowGQX END=23219591 GT ./. chr1 23221914 . T . . LowGQX END=23222125 GT ./. chr1 23222853 . C . . LowGQX END=23223023 GT ./. chr1 23232429 . T . . LowGQX END=23232654 GT ./. chr1 23233152 . C . . LowGQX END=23233502 GT ./. chr1 23234395 . T . . LowGQX END=23234713 GT ./. chr1 23235464 . G . . LowGQX END=23235716 GT ./. chr1 23236824 . G . . LowGQX END=23237120 GT ./. chr1 23238886 . T . . LowGQX END=23239145 GT ./. chr1 23239904 . A . . LowGQX END=23240115 GT ./. chr1 23240150 . G . . LowGQX END=23240364 GT ./. chr1 23280238 . C . . LowGQX END=23280518 GT ./. chr1 23281813 . C . . LowGQX END=23281920 GT ./. chr1 23285177 . C . . LowGQX END=23285414 GT ./. chr1 23286434 . C . . LowGQX END=23286593 GT ./. chr1 23289599 . C . . LowGQX END=23289758 GT ./. chr1 23291680 . T . . LowGQX END=23291840 GT ./. chr1 23337393 . A . . LowGQX END=23337694 GT ./. chr1 23340375 . C . . LowGQX END=23340539 GT ./. chr1 23342216 . A . . LowGQX END=23342316 GT ./. chr1 23346077 . C . . LowGQX END=23346447 GT ./. chr1 23356960 . A . . LowGQX END=23357130 GT ./. chr1 23370840 . C . . LowGQX END=23371000 GT ./. chr1 23376878 . A . . LowGQX END=23377016 GT ./. chr1 23380244 . T . . LowGQX END=23380344 GT ./. chr1 23381559 . T . . LowGQX END=23381659 GT ./. chr1 23382423 . A . . LowGQX END=23382534 GT ./. chr1 23383968 . C . . LowGQX END=23384068 GT ./. chr1 23385564 . A . . LowGQX END=23385664 GT ./. chr1 23385796 . A . . LowGQX END=23385896 GT ./. chr1 23392509 . T . . LowGQX END=23392609 GT ./. chr1 23395030 . A . . LowGQX END=23395177 GT ./. chr1 23395550 . T . . LowGQX END=23395650 GT ./. chr1 23397716 . A . . LowGQX END=23397855 GT ./. chr1 23398604 . T . . LowGQX END=23398704 GT ./. chr1 23399783 . A . . LowGQX END=23399899 GT ./. chr1 23403719 . A . . LowGQX END=23403856 GT ./. chr1 23405481 . A . . LowGQX END=23405673 GT ./. chr1 23406044 . A . . LowGQX END=23406163 GT ./. chr1 23407937 . A . . LowGQX END=23408069 GT ./. chr1 23408711 . A . . LowGQX END=23408862 GT ./. chr1 23409670 . A . . LowGQX END=23409860 GT ./. chr1 23415386 . G . . LowGQX END=23415549 GT ./. chr1 23417337 . C . . LowGQX END=23417437 GT ./. chr1 23417681 . A . . LowGQX END=23420757 GT ./. chr1 23519577 . G . . LowGQX END=23520715 GT ./. chr1 23636945 . G . . LowGQX END=23637562 GT ./. chr1 23637692 . A . . LowGQX END=23637818 GT ./. chr1 23640044 . A . . LowGQX END=23640244 GT ./. chr1 23644974 . A . . LowGQX END=23645191 GT ./. chr1 23648019 . A . . LowGQX END=23648159 GT ./. chr1 23650047 . A . . LowGQX END=23650247 GT ./. chr1 23660009 . A . . LowGQX END=23660127 GT ./. chr1 23664245 . A . . LowGQX END=23664357 GT ./. chr1 23664981 . A . . LowGQX END=23665104 GT ./. chr1 23667343 . A . . LowGQX END=23667504 GT ./. chr1 23688460 . G . . LowGQX END=23689717 GT ./. chr1 23693533 . A . . LowGQX END=23693664 GT ./. chr1 23694433 . G . . LowGQX END=23694533 GT ./. chr1 23695789 . G . . LowGQX END=23696174 GT ./. chr1 23697619 . T . . LowGQX END=23697719 GT ./. chr1 23697933 . T . . LowGQX END=23698061 GT ./. chr1 23707913 . G . . LowGQX END=23708013 GT ./. chr1 23710782 . T . . LowGQX END=23710911 GT ./. chr1 23713765 . C . . LowGQX END=23713913 GT ./. chr1 23720371 . C . . LowGQX END=23720527 GT ./. chr1 23724015 . G . . LowGQX END=23724115 GT ./. chr1 23724254 . C . . LowGQX END=23724494 GT ./. chr1 23730593 . G . . LowGQX END=23730693 GT ./. chr1 23735138 . A . . LowGQX END=23735238 GT ./. chr1 23743741 . C . . LowGQX END=23743884 GT ./. chr1 23744396 . C . . LowGQX END=23744503 GT ./. chr1 23745499 . C . . LowGQX END=23745651 GT ./. chr1 23750256 . C . . LowGQX END=23750416 GT ./. chr1 23751042 . A . . LowGQX END=23751142 GT ./. chr1 23756337 . G . . LowGQX END=23756437 GT ./. chr1 23757524 . C . . LowGQX END=23757675 GT ./. chr1 23758116 . A . . LowGQX END=23758476 GT ./. chr1 23759558 . A . . LowGQX END=23759768 GT ./. chr1 23759855 . C . . LowGQX END=23760028 GT ./. chr1 23760103 . C . . LowGQX END=23760203 GT ./. chr1 23760745 . A . . LowGQX END=23760865 GT ./. chr1 23761019 . C . . LowGQX END=23761119 GT ./. chr1 23762305 . G . . LowGQX END=23762524 GT ./. chr1 23763051 . A . . LowGQX END=23763151 GT ./. chr1 23763402 . A . . LowGQX END=23763540 GT ./. chr1 23763621 . A . . LowGQX END=23763816 GT ./. chr1 23763892 . C . . LowGQX END=23763992 GT ./. chr1 23765234 . A . . LowGQX END=23765334 GT ./. chr1 23765639 . A . . LowGQX END=23765739 GT ./. chr1 23767593 . A . . LowGQX END=23767707 GT ./. chr1 23767874 . G . . LowGQX END=23767974 GT ./. chr1 23768136 . G . . LowGQX END=23768236 GT ./. chr1 23768672 . T . . LowGQX END=23768772 GT ./. chr1 23768992 . A . . LowGQX END=23769129 GT ./. chr1 23777947 . A . . LowGQX END=23778047 GT ./. chr1 23779178 . A . . LowGQX END=23779278 GT ./. chr1 23782372 . A . . LowGQX END=23782522 GT ./. chr1 23782602 . G . . LowGQX END=23782702 GT ./. chr1 23810465 . G . . LowGQX END=23810629 GT ./. chr1 23836370 . A . . LowGQX END=23836643 GT ./. chr1 23842814 . A . . LowGQX END=23843035 GT ./. chr1 23845506 . A . . LowGQX END=23845625 GT ./. chr1 23847403 . A . . LowGQX END=23847566 GT ./. chr1 23848327 . A . . LowGQX END=23848551 GT ./. chr1 23850873 . A . . LowGQX END=23850983 GT ./. chr1 23857032 . A . . LowGQX END=23857288 GT ./. chr1 23885431 . G . . LowGQX END=23885531 GT ./. chr1 23885616 . A . . LowGQX END=23885920 GT ./. chr1 23907985 . G . . LowGQX END=23908169 GT ./. chr1 23918972 . T . . LowGQX END=23919303 GT ./. chr1 23953215 . C . . LowGQX END=23954028 GT ./. chr1 23954271 . C . . LowGQX END=23954489 GT ./. chr1 23954926 . T . . LowGQX END=23955093 GT ./. chr1 23955960 . T . . LowGQX END=23956060 GT ./. chr1 23965598 . G . . LowGQX END=23965742 GT ./. chr1 23966169 . G . . LowGQX END=23966286 GT ./. chr1 23966878 . G . . LowGQX END=23967059 GT ./. chr1 24018263 . G . . LowGQX END=24018377 GT ./. chr1 24019048 . C . . LowGQX END=24019301 GT ./. chr1 24020246 . G . . LowGQX END=24020455 GT ./. chr1 24021099 . G . . LowGQX END=24021333 GT ./. chr1 24022237 . C . . LowGQX END=24022459 GT ./. chr1 24022759 . T . . LowGQX END=24022915 GT ./. chr1 24069885 . G . . LowGQX END=24070071 GT ./. chr1 24075490 . T . . LowGQX END=24075590 GT ./. chr1 24076330 . A . . LowGQX END=24076441 GT ./. chr1 24077333 . A . . LowGQX END=24078523 GT ./. chr1 24078895 . A . . LowGQX END=24079011 GT ./. chr1 24080588 . A . . LowGQX END=24080748 GT ./. chr1 24080851 . A . . LowGQX END=24080953 GT ./. chr1 24082331 . A . . LowGQX END=24082516 GT ./. chr1 24082762 . A . . LowGQX END=24082922 GT ./. chr1 24083441 . A . . LowGQX END=24083618 GT ./. chr1 24085983 . C . . LowGQX END=24086083 GT ./. chr1 24104933 . G . . LowGQX END=24105273 GT ./. chr1 24105900 . T . . LowGQX END=24106000 GT ./. chr1 24106343 . C . . LowGQX END=24106443 GT ./. chr1 24112163 . A . . LowGQX END=24112272 GT ./. chr1 24112803 . A . . LowGQX END=24112916 GT ./. chr1 24113763 . A . . LowGQX END=24113869 GT ./. chr1 24119162 . C . . LowGQX END=24119262 GT ./. chr1 24119464 . C . . LowGQX END=24119564 GT ./. chr1 24119624 . T . . LowGQX END=24119724 GT ./. chr1 24120169 . T . . LowGQX END=24120269 GT ./. chr1 24120336 . C . . LowGQX END=24120436 GT ./. chr1 24120540 . C . . LowGQX END=24120640 GT ./. chr1 24120712 . A . . LowGQX END=24120888 GT ./. chr1 24120915 . A . . LowGQX END=24121093 GT ./. chr1 24121148 . G . . LowGQX END=24121248 GT ./. chr1 24122388 . C . . LowGQX END=24122549 GT ./. chr1 24122590 . T . . LowGQX END=24122807 GT ./. chr1 24122948 . G . . LowGQX END=24123128 GT ./. chr1 24123136 . T . . LowGQX END=24123689 GT ./. chr1 24124134 . T . . LowGQX END=24124413 GT ./. chr1 24124556 . G . . LowGQX END=24124778 GT ./. chr1 24124991 . T . . LowGQX END=24125272 GT ./. chr1 24125326 . T . . LowGQX END=24125549 GT ./. chr1 24128902 . T . . LowGQX END=24129106 GT ./. chr1 24130813 . C . . LowGQX END=24131067 GT ./. chr1 24133475 . G . . LowGQX END=24133575 GT ./. chr1 24133644 . C . . LowGQX END=24133776 GT ./. chr1 24134574 . C . . LowGQX END=24134865 GT ./. chr1 24137175 . G . . LowGQX END=24137341 GT ./. chr1 24140629 . C . . LowGQX END=24140880 GT ./. chr1 24143114 . A . . LowGQX END=24143312 GT ./. chr1 24143915 . C . . LowGQX END=24144125 GT ./. chr1 24146949 . T . . LowGQX END=24147135 GT ./. chr1 24151795 . G . . LowGQX END=24151957 GT ./. chr1 24164558 . G . . LowGQX END=24164789 GT ./. chr1 24172154 . C . . LowGQX END=24172397 GT ./. chr1 24172513 . G . . LowGQX END=24172715 GT ./. chr1 24175088 . T . . LowGQX END=24175381 GT ./. chr1 24180809 . A . . LowGQX END=24181102 GT ./. chr1 24186237 . T . . LowGQX END=24186445 GT ./. chr1 24189573 . C . . LowGQX END=24189813 GT ./. chr1 24191930 . T . . LowGQX END=24192167 GT ./. chr1 24194337 . T . . LowGQX END=24194828 GT ./. chr1 24201023 . C . . LowGQX END=24202110 GT ./. chr1 24287946 . A . . LowGQX END=24288370 GT ./. chr1 24294134 . T . . LowGQX END=24294234 GT ./. chr1 24294381 . A . . LowGQX END=24294481 GT ./. chr1 24297630 . T . . LowGQX END=24297932 GT ./. chr1 24298040 . T . . LowGQX END=24298191 GT ./. chr1 24298308 . A . . LowGQX END=24298505 GT ./. chr1 24301462 . A . . LowGQX END=24301570 GT ./. chr1 24305195 . A . . LowGQX END=24305310 GT ./. chr1 24306604 . G . . LowGQX END=24306764 GT ./. chr1 24383852 . T . . LowGQX END=24384120 GT ./. chr1 24385392 . G . . LowGQX END=24385492 GT ./. chr1 24387512 . T . . LowGQX END=24387612 GT ./. chr1 24387697 . A . . LowGQX END=24387832 GT ./. chr1 24388434 . A . . LowGQX END=24388602 GT ./. chr1 24389614 . A . . LowGQX END=24389727 GT ./. chr1 24389952 . C . . LowGQX END=24390052 GT ./. chr1 24390556 . T . . LowGQX END=24390656 GT ./. chr1 24392275 . A . . LowGQX END=24392494 GT ./. chr1 24392503 . G . . LowGQX END=24392699 GT ./. chr1 24393496 . C . . LowGQX END=24393596 GT ./. chr1 24394440 . T . . LowGQX END=24394540 GT ./. chr1 24394711 . A . . LowGQX END=24394860 GT ./. chr1 24397605 . A . . LowGQX END=24397746 GT ./. chr1 24398432 . G . . LowGQX END=24398532 GT ./. chr1 24400648 . A . . LowGQX END=24400762 GT ./. chr1 24401777 . T . . LowGQX END=24401968 GT ./. chr1 24402647 . A . . LowGQX END=24402766 GT ./. chr1 24406504 . A . . LowGQX END=24406687 GT ./. chr1 24407818 . A . . LowGQX END=24407949 GT ./. chr1 24408489 . A . . LowGQX END=24408681 GT ./. chr1 24409081 . A . . LowGQX END=24409207 GT ./. chr1 24410801 . T . . LowGQX END=24411132 GT ./. chr1 24413132 . A . . LowGQX END=24413188 GT ./. chr1 24413189 . A . . LowGQX END=24413320;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 24416026 . A . . LowGQX END=24416158 GT ./. chr1 24416532 . G . . LowGQX END=24416632 GT ./. chr1 24417285 . A . . LowGQX END=24417489 GT ./. chr1 24418631 . C . . LowGQX END=24418842 GT ./. chr1 24419435 . A . . LowGQX END=24419625 GT ./. chr1 24421341 . A . . LowGQX END=24421483 GT ./. chr1 24421905 . G . . LowGQX END=24422005 GT ./. chr1 24424408 . C . . LowGQX END=24424508 GT ./. chr1 24426168 . A . . LowGQX END=24426268 GT ./. chr1 24432408 . A . . LowGQX END=24432570 GT ./. chr1 24433561 . A . . LowGQX END=24433725 GT ./. chr1 24434474 . C . . LowGQX END=24434574 GT ./. chr1 24434943 . G . . LowGQX END=24435154 GT ./. chr1 24447293 . C . . LowGQX END=24448230 GT ./. chr1 24449790 . A . . LowGQX END=24450034 GT ./. chr1 24454629 . A . . LowGQX END=24454828 GT ./. chr1 24460688 . A . . LowGQX END=24460879 GT ./. chr1 24463619 . A . . LowGQX END=24463802 GT ./. chr1 24465070 . A . . LowGQX END=24465207 GT ./. chr1 24469502 . T . . LowGQX END=24469602 GT ./. chr1 24483618 . G . . LowGQX END=24484384 GT ./. chr1 24485535 . G . . LowGQX END=24485675 GT ./. chr1 24485962 . A . . LowGQX END=24486126 GT ./. chr1 24487905 . G . . LowGQX END=24488177 GT ./. chr1 24495905 . A . . LowGQX END=24496094 GT ./. chr1 24507219 . A . . LowGQX END=24507347 GT ./. chr1 24513600 . A . . LowGQX END=24513760 GT ./. chr1 24646000 . G . . LowGQX END=24646100 GT ./. chr1 24649542 . A . . LowGQX END=24649642 GT ./. chr1 24657914 . A . . LowGQX END=24658105 GT ./. chr1 24661116 . T . . LowGQX END=24661216 GT ./. chr1 24662970 . A . . LowGQX END=24663320 GT ./. chr1 24663555 . T . . LowGQX END=24663655 GT ./. chr1 24664124 . A . . LowGQX END=24664282 GT ./. chr1 24664480 . A . . LowGQX END=24664580;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 24664581 . G . . LowGQX . GT ./. chr1 24664582 . T . . LowGQX END=24664596;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 24666156 . A . . LowGQX END=24666256 GT ./. chr1 24668603 . A . . LowGQX END=24668766 GT ./. chr1 24669174 . T . . LowGQX END=24669274 GT ./. chr1 24669380 . A . . LowGQX END=24669518 GT ./. chr1 24671355 . T . . LowGQX END=24671455 GT ./. chr1 24673038 . C . . LowGQX END=24673138 GT ./. chr1 24673951 . T . . LowGQX END=24674051 GT ./. chr1 24676531 . C . . LowGQX END=24676631 GT ./. chr1 24680862 . A . . LowGQX END=24680981 GT ./. chr1 24684661 . T . . LowGQX END=24685112 GT ./. chr1 24687339 . A . . LowGQX END=24687534 GT ./. chr1 24690674 . G . . LowGQX END=24690862 GT ./. chr1 24695817 . A . . LowGQX END=24695917 GT ./. chr1 24696160 . T . . LowGQX END=24696332 GT ./. chr1 24700190 . A . . LowGQX END=24700303 GT ./. chr1 24706104 . A . . LowGQX END=24706316 GT ./. chr1 24710390 . A . . LowGQX END=24710496 GT ./. chr1 24718050 . C . . LowGQX END=24718170 GT ./. chr1 24727793 . G . . LowGQX END=24727893 GT ./. chr1 24746035 . A . . LowGQX END=24746135 GT ./. chr1 24766647 . G . . LowGQX END=24766747 GT ./. chr1 24768543 . A . . LowGQX END=24768719 GT ./. chr1 24771655 . C . . LowGQX END=24771755 GT ./. chr1 24775969 . A . . LowGQX END=24776119 GT ./. chr1 24779896 . A . . LowGQX END=24779997 GT ./. chr1 24780456 . G . . LowGQX END=24780616 GT ./. chr1 24782626 . A . . LowGQX END=24782766 GT ./. chr1 24784224 . C . . LowGQX END=24784324 GT ./. chr1 24785373 . T . . LowGQX END=24785473 GT ./. chr1 24786899 . A . . LowGQX END=24787053 GT ./. chr1 24790514 . A . . LowGQX END=24790614 GT ./. chr1 24792487 . T . . LowGQX END=24792587 GT ./. chr1 24795474 . A . . LowGQX END=24795678 GT ./. chr1 24840861 . T . . LowGQX END=24841060 GT ./. chr1 24857706 . A . . LowGQX END=24857884 GT ./. chr1 24859571 . A . . LowGQX END=24859747 GT ./. chr1 24861531 . C . . LowGQX END=24861770 GT ./. chr1 24921913 . A . . LowGQX END=24922013 GT ./. chr1 24927424 . T . . LowGQX END=24927524 GT ./. chr1 24932095 . A . . LowGQX END=24932241 GT ./. chr1 24969719 . G . . LowGQX END=24969879 GT ./. chr1 24972470 . T . . LowGQX END=24972570 GT ./. chr1 24973156 . A . . LowGQX END=24973283 GT ./. chr1 24975348 . A . . LowGQX END=24975538 GT ./. chr1 24976460 . A . . LowGQX END=24976580 GT ./. chr1 24977898 . A . . LowGQX END=24978106 GT ./. chr1 24978923 . A . . LowGQX END=24979122 GT ./. chr1 24979402 . A . . LowGQX END=24979526 GT ./. chr1 24980766 . T . . LowGQX END=24980866 GT ./. chr1 24981344 . A . . LowGQX END=24981623 GT ./. chr1 24987201 . C . . LowGQX END=24987301 GT ./. chr1 24987795 . T . . LowGQX END=24987895 GT ./. chr1 24989149 . A . . LowGQX END=24989298 GT ./. chr1 24989645 . T . . LowGQX END=24989745 GT ./. chr1 24993252 . T . . LowGQX END=24993419 GT ./. chr1 24995612 . A . . LowGQX END=24996081 GT ./. chr1 24996609 . A . . LowGQX END=24996809 GT ./. chr1 24997875 . A . . LowGQX END=24998089 GT ./. chr1 24998671 . A . . LowGQX END=24998780 GT ./. chr1 25072031 . C . . LowGQX END=25072131 GT ./. chr1 25098292 . T . . LowGQX END=25098392 GT ./. chr1 25124231 . A . . LowGQX END=25124391 GT ./. chr1 25140523 . A . . LowGQX END=25140713 GT ./. chr1 25153499 . A . . LowGQX END=25153610 GT ./. chr1 25166349 . A . . LowGQX END=25166535 GT ./. chr1 25167262 . A . . LowGQX END=25167431 GT ./. chr1 25228611 . G . . LowGQX END=25229160 GT ./. chr1 25233748 . A . . LowGQX END=25233911 GT ./. chr1 25245669 . G . . LowGQX END=25245888 GT ./. chr1 25254063 . A . . LowGQX END=25254224 GT ./. chr1 25255496 . C . . LowGQX END=25256363 GT ./. chr1 25290984 . C . . LowGQX END=25291084 GT ./. chr1 25549755 . G . . LowGQX END=25549925 GT ./. chr1 25551491 . A . . LowGQX END=25551535;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 25551536 . A . . LowGQX END=25551537 GT ./. chr1 25551538 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 25551539 . G . . LowGQX . GT ./. chr1 25551540 . C . . LowGQX END=25551541;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 25551542 . C . . LowGQX . GT ./. chr1 25551543 . A . . LowGQX END=25551555;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 25551556 . A . . LowGQX . GT ./. chr1 25551557 . G . . LowGQX END=25551560;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 25551561 . A . . LowGQX . GT ./. chr1 25551562 . C . . LowGQX END=25551567;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 25551568 . G . . LowGQX . GT ./. chr1 25551569 . A . . LowGQX END=25551570;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 25551571 . G . . LowGQX . GT ./. chr1 25551572 . T . . LowGQX END=25551575;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 25551576 . G . . LowGQX . GT ./. chr1 25551577 . A . . LowGQX END=25551578;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 25551579 . A . . LowGQX . GT ./. chr1 25551580 . A . . LowGQX END=25551586;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 25551587 . C . . LowGQX . GT ./. chr1 25551588 . T . . LowGQX END=25551593;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 25551594 . G . . LowGQX . GT ./. chr1 25553928 . C . . LowGQX END=25554028 GT ./. chr1 25554607 . A . . LowGQX END=25554729 GT ./. chr1 25555487 . A . . LowGQX END=25555617 GT ./. chr1 25558502 . T . . LowGQX END=25558705 GT ./. chr1 25558897 . A . . LowGQX END=25558997 GT ./. chr1 25569078 . T . . LowGQX END=25569199 GT ./. chr1 25570033 . A . . LowGQX END=25570133 GT ./. chr1 25570663 . T . . LowGQX END=25570763 GT ./. chr1 25570891 . G . . LowGQX END=25571035 GT ./. chr1 25571583 . A . . LowGQX END=25571795 GT ./. chr1 25572933 . A . . LowGQX END=25573457 GT ./. chr1 25598988 . G . . LowGQX END=25599238 GT ./. chr1 25611013 . A . . LowGQX END=25611302 GT ./. chr1 25617081 . T . . LowGQX END=25617334 GT ./. chr1 25627386 . C . . LowGQX END=25627636 GT ./. chr1 25627960 . A . . LowGQX END=25628229 GT ./. chr1 25629762 . G . . LowGQX END=25630002 GT ./. chr1 25633036 . G . . LowGQX END=25633364 GT ./. chr1 25634137 . G . . LowGQX END=25634326 GT ./. chr1 25643409 . A . . LowGQX END=25643622 GT ./. chr1 25648329 . T . . LowGQX END=25648525 GT ./. chr1 25655310 . T . . LowGQX END=25655686 GT ./. chr1 25666975 . A . . LowGQX END=25667075 GT ./. chr1 25669450 . A . . LowGQX END=25669567 GT ./. chr1 25678101 . T . . LowGQX END=25678201 GT ./. chr1 25679370 . A . . LowGQX END=25679470 GT ./. chr1 25683212 . G . . LowGQX END=25683365 GT ./. chr1 25687124 . A . . LowGQX END=25687224 GT ./. chr1 25688922 . T . . LowGQX END=25689098 GT ./. chr1 25696907 . T . . LowGQX END=25697083 GT ./. chr1 25701789 . C . . LowGQX END=25701971 GT ./. chr1 25712151 . C . . LowGQX END=25712387 GT ./. chr1 25715416 . T . . LowGQX END=25715656 GT ./. chr1 25717189 . G . . LowGQX END=25717458 GT ./. chr1 25718434 . G . . LowGQX END=25718684 GT ./. chr1 25729036 . G . . LowGQX END=25729289 GT ./. chr1 25735123 . G . . LowGQX END=25735412 GT ./. chr1 25737830 . C . . LowGQX END=25737931 GT ./. chr1 25747079 . C . . LowGQX END=25747329 GT ./. chr1 25757520 . G . . LowGQX END=25757680 GT ./. chr1 25773251 . A . . LowGQX END=25773397 GT ./. chr1 25775297 . A . . LowGQX END=25775428 GT ./. chr1 25780748 . A . . LowGQX END=25780876 GT ./. chr1 25783122 . G . . LowGQX END=25783325 GT ./. chr1 25784880 . A . . LowGQX END=25785386 GT ./. chr1 25810605 . A . . LowGQX END=25810768 GT ./. chr1 25812102 . A . . LowGQX END=25812289 GT ./. chr1 25815662 . A . . LowGQX END=25815787 GT ./. chr1 25817899 . A . . LowGQX END=25818078 GT ./. chr1 25824753 . A . . LowGQX END=25824960 GT ./. chr1 25870139 . T . . LowGQX END=25870329 GT ./. chr1 25880362 . G . . LowGQX END=25880607 GT ./. chr1 25881300 . T . . LowGQX END=25881515 GT ./. chr1 25883593 . G . . LowGQX END=25883810 GT ./. chr1 25889084 . T . . LowGQX END=25889259 GT ./. chr1 25889500 . G . . LowGQX END=25889696 GT ./. chr1 25890101 . A . . LowGQX END=25890334 GT ./. chr1 25891613 . G . . LowGQX END=25891750 GT ./. chr1 25893288 . G . . LowGQX END=25893535 GT ./. chr1 25944277 . G . . LowGQX END=25944837 GT ./. chr1 26012929 . A . . LowGQX END=26013030 GT ./. chr1 26073107 . G . . LowGQX END=26073277 GT ./. chr1 26075737 . G . . LowGQX END=26075837 GT ./. chr1 26079973 . A . . LowGQX END=26080073 GT ./. chr1 26085081 . A . . LowGQX END=26085203 GT ./. chr1 26090362 . C . . LowGQX END=26090462 GT ./. chr1 26098146 . A . . LowGQX END=26098266 GT ./. chr1 26104594 . A . . LowGQX END=26104818 GT ./. chr1 26107429 . A . . LowGQX END=26107606 GT ./. chr1 26109074 . A . . LowGQX END=26109194 GT ./. chr1 26110152 . A . . LowGQX END=26110283 GT ./. chr1 26126671 . G . . LowGQX END=26126956 GT ./. chr1 26127483 . A . . LowGQX END=26127703 GT ./. chr1 26128468 . T . . LowGQX END=26128627 GT ./. chr1 26131582 . G . . LowGQX END=26131818 GT ./. chr1 26135020 . C . . LowGQX END=26135332 GT ./. chr1 26135466 . C . . LowGQX END=26135693 GT ./. chr1 26136123 . T . . LowGQX END=26136363 GT ./. chr1 26137894 . A . . LowGQX END=26138078 GT ./. chr1 26138131 . G . . LowGQX END=26138422 GT ./. chr1 26139127 . G . . LowGQX END=26139335 GT ./. chr1 26140077 . G . . LowGQX END=26140177 GT ./. chr1 26140321 . T . . LowGQX END=26140721 GT ./. chr1 26141988 . A . . LowGQX END=26142261 GT ./. chr1 26146673 . C . . LowGQX END=26147313 GT ./. chr1 26149464 . A . . LowGQX END=26149622 GT ./. chr1 26149722 . T . . LowGQX END=26149822 GT ./. chr1 26149834 . C . . LowGQX END=26149934 GT ./. chr1 26150112 . C . . LowGQX END=26150242 GT ./. chr1 26152791 . A . . LowGQX END=26152905 GT ./. chr1 26153104 . A . . LowGQX END=26153320 GT ./. chr1 26155998 . A . . LowGQX END=26156324 GT ./. chr1 26158410 . A . . LowGQX END=26158520 GT ./. chr1 26158564 . C . . LowGQX END=26158664 GT ./. chr1 26161482 . A . . LowGQX END=26162340 GT ./. chr1 26163902 . A . . LowGQX END=26164048 GT ./. chr1 26185709 . C . . LowGQX END=26185860 GT ./. chr1 26189288 . C . . LowGQX END=26190333 GT ./. chr1 26212213 . C . . LowGQX END=26212361 GT ./. chr1 26227493 . G . . LowGQX END=26227593 GT ./. chr1 26227980 . A . . LowGQX END=26228176 GT ./. chr1 26230110 . T . . LowGQX END=26230307 GT ./. chr1 26231112 . A . . LowGQX END=26231212 GT ./. chr1 26288478 . G . . LowGQX END=26288578 GT ./. chr1 26299047 . A . . LowGQX END=26299206 GT ./. chr1 26300969 . A . . LowGQX END=26301144 GT ./. chr1 26303169 . T . . LowGQX END=26303269 GT ./. chr1 26308853 . A . . LowGQX END=26308971 GT ./. chr1 26310435 . A . . LowGQX END=26310594 GT ./. chr1 26310936 . C . . LowGQX END=26311036 GT ./. chr1 26314720 . A . . LowGQX END=26314880 GT ./. chr1 26315937 . A . . LowGQX END=26316095 GT ./. chr1 26317213 . C . . LowGQX END=26317313 GT ./. chr1 26349136 . A . . LowGQX END=26349919 GT ./. chr1 26355681 . T . . LowGQX END=26355781 GT ./. chr1 26356089 . A . . LowGQX END=26356201 GT ./. chr1 26356965 . A . . LowGQX END=26357089 GT ./. chr1 26357581 . C . . LowGQX END=26357758 GT ./. chr1 26357949 . A . . LowGQX END=26358060 GT ./. chr1 26358882 . T . . LowGQX END=26358982 GT ./. chr1 26359714 . C . . LowGQX END=26359814 GT ./. chr1 26360185 . A . . LowGQX END=26360350 GT ./. chr1 26361325 . A . . LowGQX END=26361326;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 26361327 . G . . LowGQX . GT ./. chr1 26361328 . T . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 26361329 . A . . LowGQX END=26361356;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 26361357 . G . . LowGQX . GT ./. chr1 26361358 . C . . LowGQX END=26361360;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:3:60 chr1 26361361 . A . 33.01 LowGQX DP=3;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:2:3:3.01:60:3 chr1 26361362 . A . . LowGQX END=26361367;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361368 . T . . LowGQX . GT ./. chr1 26361369 . G . . LowGQX END=26361371;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361372 . G . . LowGQX END=26361373 GT ./. chr1 26361374 . C . . LowGQX END=26361376;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361377 . T . . LowGQX END=26361379 GT ./. chr1 26361380 . C . . LowGQX END=26361381;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361382 . G . . LowGQX END=26361383 GT ./. chr1 26361384 . T . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361385 . G . . LowGQX END=26361388 GT ./. chr1 26361389 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361390 . A . . LowGQX END=26361393 GT ./. chr1 26361394 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361395 . C . . LowGQX . GT ./. chr1 26361396 . C . . LowGQX END=26361398;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361399 . T . . LowGQX END=26361400 GT ./. chr1 26361401 . T . . LowGQX END=26361402;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361403 . G . . LowGQX . GT ./. chr1 26361404 . A . . LowGQX END=26361405;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361406 . G . . LowGQX . GT ./. chr1 26361407 . T . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361408 . C . . LowGQX . GT ./. chr1 26361409 . C . . LowGQX END=26361411;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361412 . A . . LowGQX END=26361413 GT ./. chr1 26361414 . G . . LowGQX END=26361415;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361416 . A . 8.91 LowGQX DP=1;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:0:1:0.02:60:0 chr1 26361417 . T . . LowGQX END=26361418;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361419 . T . . LowGQX . GT ./. chr1 26361420 . C . . LowGQX END=26361424;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361425 . T . . LowGQX END=26361428 GT ./. chr1 26361429 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361430 . G . . LowGQX END=26361431 GT ./. chr1 26361432 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361433 . G . . LowGQX END=26361434 GT ./. chr1 26361435 . C . . LowGQX END=26361439;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361440 . A . . LowGQX . GT ./. chr1 26361441 . G . . LowGQX END=26361442;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361443 . T . . LowGQX . GT ./. chr1 26361444 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361445 . C . . LowGQX . GT ./. chr1 26361446 . C . . LowGQX END=26361447;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361448 . C . . LowGQX . GT ./. chr1 26361449 . C . . LowGQX END=26361498;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 26361654 . A . . LowGQX END=26361679;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 26361680 . C . . LowGQX END=26361691 GT ./. chr1 26361692 . G . . LowGQX END=26361841;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 26365649 . A . . LowGQX END=26365799 GT ./. chr1 26366266 . A . . LowGQX END=26366405 GT ./. chr1 26368189 . A . . LowGQX END=26368299 GT ./. chr1 26369038 . A . . LowGQX END=26369202 GT ./. chr1 26369887 . A . . LowGQX END=26370045 GT ./. chr1 26370787 . A . . LowGQX END=26370938 GT ./. chr1 26371486 . A . . LowGQX END=26371711 GT ./. chr1 26372253 . A . . LowGQX END=26372413 GT ./. chr1 26378260 . G . . LowGQX END=26378420 GT ./. chr1 26380312 . A . . LowGQX END=26380470 GT ./. chr1 26383692 . A . . LowGQX END=26383821 GT ./. chr1 26384081 . C . . LowGQX END=26384181 GT ./. chr1 26384879 . A . . LowGQX END=26385117 GT ./. chr1 26386755 . A . . LowGQX END=26386855 GT ./. chr1 26387655 . A . . LowGQX END=26387828 GT ./. chr1 26392746 . C . . LowGQX END=26392934 GT ./. chr1 26393825 . A . . LowGQX END=26393988 GT ./. chr1 26440798 . A . . LowGQX END=26441087 GT ./. chr1 26448326 . A . . LowGQX END=26449071 GT ./. chr1 26487781 . A . . LowGQX END=26488608 GT ./. chr1 26496473 . C . . LowGQX END=26496677 GT ./. chr1 26496907 . A . . LowGQX END=26497210 GT ./. chr1 26503966 . T . . LowGQX END=26504142 GT ./. chr1 26506893 . A . . LowGQX END=26507153 GT ./. chr1 26507155 . A . . LowGQX END=26507439 GT ./. chr1 26508297 . T . . LowGQX END=26508484 GT ./. chr1 26508801 . C . . LowGQX END=26509127 GT ./. chr1 26509637 . T . . LowGQX END=26509966 GT ./. chr1 26510169 . C . . LowGQX END=26510373 GT ./. chr1 26510386 . C . . LowGQX END=26510830 GT ./. chr1 26510841 . G . . LowGQX END=26511155 GT ./. chr1 26511454 . G . . LowGQX END=26511729 GT ./. chr1 26513608 . C . . LowGQX END=26513784 GT ./. chr1 26513851 . G . . LowGQX END=26514025 GT ./. chr1 26514674 . A . . LowGQX END=26514850 GT ./. chr1 26514882 . C . . LowGQX END=26515496 GT ./. chr1 26515719 . T . . LowGQX END=26516376 GT ./. chr1 26517068 . A . . LowGQX END=26517383 GT ./. chr1 26517727 . G . . LowGQX END=26517973 GT ./. chr1 26520227 . C . . LowGQX END=26520431 GT ./. chr1 26524126 . C . . LowGQX END=26524326 GT ./. chr1 26524397 . G . . LowGQX END=26524620 GT ./. chr1 26524726 . A . . LowGQX END=26524962 GT ./. chr1 26526324 . T . . LowGQX END=26526601 GT ./. chr1 26527270 . G . . LowGQX END=26527584 GT ./. chr1 26527794 . T . . LowGQX END=26528103 GT ./. chr1 26528929 . T . . LowGQX END=26529085 GT ./. chr1 26566253 . T . . LowGQX END=26566353 GT ./. chr1 26570655 . A . . LowGQX END=26570812 GT ./. chr1 26581660 . A . . LowGQX END=26582359 GT ./. chr1 26584086 . A . . LowGQX END=26584224 GT ./. chr1 26584632 . A . . LowGQX END=26584754 GT ./. chr1 26586106 . A . . LowGQX END=26586296 GT ./. chr1 26594912 . G . . LowGQX END=26595129 GT ./. chr1 26595949 . A . . LowGQX END=26596108 GT ./. chr1 26597502 . C . . LowGQX END=26597602 GT ./. chr1 26598488 . T . . LowGQX END=26598588 GT ./. chr1 26601453 . A . . LowGQX END=26601565 GT ./. chr1 26603024 . A . . LowGQX END=26603254 GT ./. chr1 26603622 . A . . LowGQX END=26603787 GT ./. chr1 26606239 . G . . LowGQX END=26606697 GT ./. chr1 26607254 . A . . LowGQX END=26607475 GT ./. chr1 26607532 . C . . LowGQX END=26607632 GT ./. chr1 26608774 . T . . LowGQX END=26609063 GT ./. chr1 26609138 . A . . LowGQX END=26609283 GT ./. chr1 26609342 . A . . LowGQX END=26609442 GT ./. chr1 26610631 . A . . LowGQX END=26610739 GT ./. chr1 26610801 . G . . LowGQX END=26610976 GT ./. chr1 26611831 . A . . LowGQX END=26612035 GT ./. chr1 26612312 . A . . LowGQX END=26612531 GT ./. chr1 26620683 . C . . LowGQX END=26620825 GT ./. chr1 26623399 . A . . LowGQX END=26623499 GT ./. chr1 26623896 . C . . LowGQX END=26623996 GT ./. chr1 26624451 . A . . LowGQX END=26624556 GT ./. chr1 26627415 . A . . LowGQX END=26627518 GT ./. chr1 26628150 . G . . LowGQX END=26628250 GT ./. chr1 26629290 . G . . LowGQX END=26629390 GT ./. chr1 26644486 . A . . LowGQX END=26644586 GT ./. chr1 26646600 . G . . LowGQX END=26646796 GT ./. chr1 26648454 . A . . LowGQX END=26648554 GT ./. chr1 26648653 . A . . LowGQX END=26648817 GT ./. chr1 26650641 . A . . LowGQX END=26650804 GT ./. chr1 26654698 . A . . LowGQX END=26654826 GT ./. chr1 26655223 . A . . LowGQX END=26655403 GT ./. chr1 26657978 . A . . LowGQX END=26658112 GT ./. chr1 26662584 . A . . LowGQX END=26662744 GT ./. chr1 26662796 . G . . LowGQX END=26663289 GT ./. chr1 26663330 . A . . LowGQX END=26663474 GT ./. chr1 26663742 . A . . LowGQX END=26663873 GT ./. chr1 26664027 . A . . LowGQX END=26664168 GT ./. chr1 26664471 . G . . LowGQX END=26664571 GT ./. chr1 26664840 . A . . LowGQX END=26664971 GT ./. chr1 26665779 . A . . LowGQX END=26665968 GT ./. chr1 26669243 . A . . LowGQX END=26669375 GT ./. chr1 26669537 . C . . LowGQX END=26669651 GT ./. chr1 26669711 . C . . LowGQX END=26669811 GT ./. chr1 26670235 . C . . LowGQX END=26673149 GT ./. chr1 26688141 . T . . LowGQX END=26688514 GT ./. chr1 26688587 . T . . LowGQX END=26688687 GT ./. chr1 26689516 . C . . LowGQX END=26689646 GT ./. chr1 26691022 . C . . LowGQX END=26691718 GT ./. chr1 26694083 . C . . LowGQX END=26694289 GT ./. chr1 26694948 . C . . LowGQX END=26695074 GT ./. chr1 26698983 . A . . LowGQX END=26699083 GT ./. chr1 26700726 . A . . LowGQX END=26700826 GT ./. chr1 26737289 . G . . LowGQX END=26737449 GT ./. chr1 26737865 . C . . LowGQX END=26738085 GT ./. chr1 26751792 . A . . LowGQX END=26751981 GT ./. chr1 26752731 . A . . LowGQX END=26752952 GT ./. chr1 26759386 . C . . LowGQX END=26759551 GT ./. chr1 26764608 . T . . LowGQX END=26764827 GT ./. chr1 26769161 . T . . LowGQX END=26769416 GT ./. chr1 26772756 . C . . LowGQX END=26772975 GT ./. chr1 26773999 . T . . LowGQX END=26774246 GT ./. chr1 26774764 . A . . LowGQX END=26774924 GT ./. chr1 26784231 . G . . LowGQX END=26784448 GT ./. chr1 26786477 . G . . LowGQX END=26786687 GT ./. chr1 26793780 . G . . LowGQX END=26793880 GT ./. chr1 26795332 . T . . LowGQX END=26795674 GT ./. chr1 26799002 . G . . LowGQX END=26799162 GT ./. chr1 26799947 . G . . LowGQX END=26800047 GT ./. chr1 26800159 . T . . LowGQX END=26800259 GT ./. chr1 26800552 . T . . LowGQX END=26800652 GT ./. chr1 26801061 . A . . LowGQX END=26801161 GT ./. chr1 26801572 . C . . LowGQX END=26801672 GT ./. chr1 26856334 . A . . LowGQX END=26856494 GT ./. chr1 26857236 . A . . LowGQX END=26857341 GT ./. chr1 26863389 . T . . LowGQX END=26863489 GT ./. chr1 26869633 . T . . LowGQX END=26869733 GT ./. chr1 26870566 . G . . LowGQX END=26870670 GT ./. chr1 26872350 . C . . LowGQX END=26872570 GT ./. chr1 26873356 . A . . LowGQX END=26873477 GT ./. chr1 26873671 . C . . LowGQX END=26873771 GT ./. chr1 26877879 . T . . LowGQX END=26877979 GT ./. chr1 26878125 . C . . LowGQX END=26878225 GT ./. chr1 26879299 . G . . LowGQX END=26879399 GT ./. chr1 26879880 . A . . LowGQX END=26879991 GT ./. chr1 26880674 . A . . LowGQX END=26880774 GT ./. chr1 26881085 . A . . LowGQX END=26881232 GT ./. chr1 26881628 . C . . LowGQX END=26881728 GT ./. chr1 26882023 . T . . LowGQX END=26882123 GT ./. chr1 26883128 . C . . LowGQX END=26883228 GT ./. chr1 26883487 . A . . LowGQX END=26883594 GT ./. chr1 26885296 . A . . LowGQX END=26885431 GT ./. chr1 26887215 . A . . LowGQX END=26887345 GT ./. chr1 26887531 . T . . LowGQX END=26887631 GT ./. chr1 26887973 . C . . LowGQX END=26888157 GT ./. chr1 26897938 . A . . LowGQX END=26898104 GT ./. chr1 26898330 . C . . LowGQX END=26898430 GT ./. chr1 26898665 . A . . LowGQX END=26898787 GT ./. chr1 26899713 . A . . LowGQX END=26899855 GT ./. chr1 26900568 . A . . LowGQX END=26900695 GT ./. chr1 26900852 . C . . LowGQX END=26900952 GT ./. chr1 27022882 . G . . LowGQX END=27024042 GT ./. chr1 27056140 . A . . LowGQX END=27056357 GT ./. chr1 27057641 . A . . LowGQX END=27058098 GT ./. chr1 27059165 . A . . LowGQX END=27059286 GT ./. chr1 27087345 . A . . LowGQX END=27087590 GT ./. chr1 27087870 . A . . LowGQX END=27087970 GT ./. chr1 27088641 . A . . LowGQX END=27088813 GT ./. chr1 27089462 . A . . LowGQX END=27089779 GT ./. chr1 27092710 . A . . LowGQX END=27092860 GT ./. chr1 27092946 . A . . LowGQX END=27093060 GT ./. chr1 27094279 . A . . LowGQX END=27094493 GT ./. chr1 27097608 . A . . LowGQX END=27097820 GT ./. chr1 27098989 . A . . LowGQX END=27099126 GT ./. chr1 27099301 . A . . LowGQX END=27099481 GT ./. chr1 27099835 . A . . LowGQX END=27099990 GT ./. chr1 27100069 . A . . LowGQX END=27100211 GT ./. chr1 27100291 . A . . LowGQX END=27100392 GT ./. chr1 27100818 . A . . LowGQX END=27101714 GT ./. chr1 27102066 . A . . LowGQX END=27102201 GT ./. chr1 27102299 . C . . LowGQX END=27102399 GT ./. chr1 27105512 . A . . LowGQX END=27107250 GT ./. chr1 27117256 . G . . LowGQX END=27117436 GT ./. chr1 27120553 . T . . LowGQX END=27121777 GT ./. chr1 27124003 . G . . LowGQX END=27124387 GT ./. chr1 27153283 . C . . LowGQX END=27153633 GT ./. chr1 27158936 . A . . LowGQX END=27159101 GT ./. chr1 27175097 . A . . LowGQX END=27175251 GT ./. chr1 27176790 . A . . LowGQX END=27176932 GT ./. chr1 27177024 . T . . LowGQX END=27177124 GT ./. chr1 27177618 . A . . LowGQX END=27177725 GT ./. chr1 27179242 . A . . LowGQX END=27179359 GT ./. chr1 27180215 . A . . LowGQX END=27180337 GT ./. chr1 27182646 . A . . LowGQX END=27182746 GT ./. chr1 27189702 . C . . LowGQX END=27190453 GT ./. chr1 27206155 . G . . LowGQX END=27206255 GT ./. chr1 27210649 . A . . LowGQX END=27210784 GT ./. chr1 27212462 . A . . LowGQX END=27212627 GT ./. chr1 27212873 . A . . LowGQX END=27213016 GT ./. chr1 27213017 . C . . LowGQX END=27213033;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 27215458 . A . . LowGQX END=27215619 GT ./. chr1 27216175 . A . . LowGQX END=27216590 GT ./. chr1 27217269 . A . . LowGQX END=27217369 GT ./. chr1 27217499 . G . . LowGQX END=27217720 GT ./. chr1 27218900 . A . . LowGQX END=27219032 GT ./. chr1 27219159 . A . . LowGQX END=27219285 GT ./. chr1 27219860 . T . . LowGQX END=27219960 GT ./. chr1 27220725 . A . . LowGQX END=27220904 GT ./. chr1 27223790 . A . . LowGQX END=27224219 GT ./. chr1 27226481 . A . . LowGQX END=27226936 GT ./. chr1 27237571 . C . . LowGQX END=27237731 GT ./. chr1 27238285 . A . . LowGQX END=27238629 GT ./. chr1 27239849 . C . . LowGQX END=27240483 GT ./. chr1 27248289 . G . . LowGQX END=27248472 GT ./. chr1 27250529 . A . . LowGQX END=27250709 GT ./. chr1 27256152 . T . . LowGQX END=27256252 GT ./. chr1 27267897 . T . . LowGQX END=27268361 GT ./. chr1 27269100 . T . . LowGQX END=27269608 GT ./. chr1 27271830 . C . . LowGQX END=27272229 GT ./. chr1 27272570 . C . . LowGQX END=27272724 GT ./. chr1 27276552 . G . . LowGQX END=27276652 GT ./. chr1 27277161 . T . . LowGQX END=27277261 GT ./. chr1 27277831 . A . . LowGQX END=27278874 GT ./. chr1 27320265 . T . . LowGQX END=27320965 GT ./. chr1 27332433 . A . . LowGQX END=27333451 GT ./. chr1 27338826 . A . . LowGQX END=27339166 GT ./. chr1 27426796 . T . . LowGQX END=27427138 GT ./. chr1 27427681 . G . . LowGQX END=27427781 GT ./. chr1 27428214 . A . . LowGQX END=27428320 GT ./. chr1 27428505 . A . . LowGQX END=27428624 GT ./. chr1 27428874 . A . . LowGQX END=27429052 GT ./. chr1 27429150 . G . . LowGQX END=27429250 GT ./. chr1 27429709 . A . . LowGQX END=27429809 GT ./. chr1 27432192 . C . . LowGQX END=27432581 GT ./. chr1 27434137 . A . . LowGQX END=27434359 GT ./. chr1 27436016 . A . . LowGQX END=27436271 GT ./. chr1 27440315 . A . . LowGQX END=27440780 GT ./. chr1 27480472 . A . . LowGQX END=27480828 GT ./. chr1 27587520 . T . . LowGQX END=27587620 GT ./. chr1 27589575 . A . . LowGQX END=27589735 GT ./. chr1 27608704 . T . . LowGQX END=27608804 GT ./. chr1 27609827 . A . . LowGQX END=27609943 GT ./. chr1 27614163 . A . . LowGQX END=27614355 GT ./. chr1 27618704 . A . . LowGQX END=27618891 GT ./. chr1 27620511 . A . . LowGQX END=27620611 GT ./. chr1 27621003 . A . . LowGQX END=27621123 GT ./. chr1 27622805 . C . . LowGQX END=27622905 GT ./. chr1 27623538 . G . . LowGQX END=27623650 GT ./. chr1 27624427 . A . . LowGQX END=27624605 GT ./. chr1 27627715 . A . . LowGQX END=27627955 GT ./. chr1 27630110 . A . . LowGQX END=27630310 GT ./. chr1 27631490 . A . . LowGQX END=27631687 GT ./. chr1 27632675 . A . . LowGQX END=27632877 GT ./. chr1 27648687 . G . . LowGQX END=27648885 GT ./. chr1 27657204 . C . . LowGQX END=27657304 GT ./. chr1 27657444 . T . . LowGQX END=27657544 GT ./. chr1 27658527 . T . . LowGQX END=27658627 GT ./. chr1 27658902 . G . . LowGQX END=27659002 GT ./. chr1 27659839 . A . . LowGQX END=27659939 GT ./. chr1 27660447 . A . . LowGQX END=27660548 GT ./. chr1 27660640 . A . . LowGQX END=27660775 GT ./. chr1 27661119 . A . . LowGQX END=27661219 GT ./. chr1 27661864 . T . . LowGQX END=27661964 GT ./. chr1 27671824 . T . . LowGQX END=27672019 GT ./. chr1 27673889 . C . . LowGQX END=27674063 GT ./. chr1 27674286 . C . . LowGQX END=27674386 GT ./. chr1 27674431 . C . . LowGQX END=27674531 GT ./. chr1 27675558 . T . . LowGQX END=27675658 GT ./. chr1 27675887 . A . . LowGQX END=27676626 GT ./. chr1 27676712 . A . . LowGQX END=27676979 GT ./. chr1 27677283 . A . . LowGQX END=27677446 GT ./. chr1 27677686 . A . . LowGQX END=27677839 GT ./. chr1 27677945 . A . . LowGQX END=27678051 GT ./. chr1 27679772 . A . . LowGQX END=27679982 GT ./. chr1 27680202 . A . . LowGQX END=27680346 GT ./. chr1 27681777 . C . . LowGQX END=27681967 GT ./. chr1 27682149 . C . . LowGQX END=27682249 GT ./. chr1 27682504 . C . . LowGQX END=27682604 GT ./. chr1 27682877 . A . . LowGQX END=27682994 GT ./. chr1 27683049 . C . . LowGQX END=27683243 GT ./. chr1 27683498 . A . . LowGQX END=27683608 GT ./. chr1 27683889 . A . . LowGQX END=27684070 GT ./. chr1 27684200 . A . . LowGQX END=27684370 GT ./. chr1 27684637 . G . . LowGQX END=27684848 GT ./. chr1 27684897 . C . . LowGQX END=27685118 GT ./. chr1 27685177 . G . . LowGQX END=27685360 GT ./. chr1 27685906 . A . . LowGQX END=27686016 GT ./. chr1 27686347 . A . . LowGQX END=27686488 GT ./. chr1 27686730 . A . . LowGQX END=27686862 GT ./. chr1 27687194 . A . . LowGQX END=27687332 GT ./. chr1 27687406 . C . . LowGQX END=27687506 GT ./. chr1 27687646 . A . . LowGQX END=27687746 GT ./. chr1 27687812 . A . . LowGQX END=27687912 GT ./. chr1 27688009 . A . . LowGQX END=27688121 GT ./. chr1 27688194 . A . . LowGQX END=27688361 GT ./. chr1 27688580 . A . . LowGQX END=27688744 GT ./. chr1 27689130 . A . . LowGQX END=27689247 GT ./. chr1 27689340 . A . . LowGQX END=27689515 GT ./. chr1 27689931 . A . . LowGQX END=27690042 GT ./. chr1 27690406 . A . . LowGQX END=27690579 GT ./. chr1 27690693 . A . . LowGQX END=27690888 GT ./. chr1 27691114 . C . . LowGQX END=27691214 GT ./. chr1 27691262 . A . . LowGQX END=27691406 GT ./. chr1 27692736 . C . . LowGQX END=27693091 GT ./. chr1 27695725 . C . . LowGQX END=27695971 GT ./. chr1 27697078 . C . . LowGQX END=27697224 GT ./. chr1 27697332 . A . . LowGQX END=27697466 GT ./. chr1 27699625 . A . . LowGQX END=27699757 GT ./. chr1 27699946 . C . . LowGQX END=27700046 GT ./. chr1 27700429 . G . . LowGQX END=27700529 GT ./. chr1 27700845 . A . . LowGQX END=27700945 GT ./. chr1 27701147 . G . . LowGQX END=27701366 GT ./. chr1 27705946 . C . . LowGQX END=27706046 GT ./. chr1 27706535 . A . . LowGQX END=27706688 GT ./. chr1 27708243 . A . . LowGQX END=27708343 GT ./. chr1 27708629 . A . . LowGQX END=27708892 GT ./. chr1 27708988 . A . . LowGQX END=27709160 GT ./. chr1 27709636 . A . . LowGQX END=27709736 GT ./. chr1 27720301 . C . . LowGQX END=27721298 GT ./. chr1 27734681 . A . . LowGQX END=27734843 GT ./. chr1 27736184 . A . . LowGQX END=27736703 GT ./. chr1 27739064 . A . . LowGQX END=27739224 GT ./. chr1 27741325 . A . . LowGQX END=27741460 GT ./. chr1 27742477 . A . . LowGQX END=27742599 GT ./. chr1 27744768 . A . . LowGQX END=27744926 GT ./. chr1 27745453 . A . . LowGQX END=27745592 GT ./. chr1 27755269 . A . . LowGQX END=27755403 GT ./. chr1 27873803 . C . . LowGQX END=27878629 GT ./. chr1 27939423 . G . . LowGQX END=27939636 GT ./. chr1 27939728 . A . . LowGQX END=27939864 GT ./. chr1 27940939 . A . . LowGQX END=27941097 GT ./. chr1 27941350 . G . . LowGQX END=27941450 GT ./. chr1 27941943 . A . . LowGQX END=27942127 GT ./. chr1 27942198 . A . . LowGQX END=27942358 GT ./. chr1 27943366 . A . . LowGQX END=27943520 GT ./. chr1 27943702 . A . . LowGQX END=27943810 GT ./. chr1 27948068 . A . . LowGQX END=27948171 GT ./. chr1 27949551 . A . . LowGQX END=27949658 GT ./. chr1 27950062 . T . . LowGQX END=27950430 GT ./. chr1 27992890 . G . . LowGQX END=27992990 GT ./. chr1 27994735 . A . . LowGQX END=27994889 GT ./. chr1 27994958 . T . . LowGQX END=27995058 GT ./. chr1 27995729 . T . . LowGQX END=27995829 GT ./. chr1 28052529 . T . . LowGQX END=28052683 GT ./. chr1 28053911 . A . . LowGQX END=28054066 GT ./. chr1 28056691 . T . . LowGQX END=28056845 GT ./. chr1 28059092 . G . . LowGQX END=28059192 GT ./. chr1 28060510 . A . . LowGQX END=28060697 GT ./. chr1 28071163 . A . . LowGQX END=28071325 GT ./. chr1 28075573 . T . . LowGQX END=28075673 GT ./. chr1 28081704 . A . . LowGQX END=28081844 GT ./. chr1 28086035 . A . . LowGQX END=28086169 GT ./. chr1 28086407 . T . . LowGQX END=28086567 GT ./. chr1 28087000 . C . . LowGQX END=28087100 GT ./. chr1 28099817 . T . . LowGQX END=28099939 GT ./. chr1 28116058 . T . . LowGQX END=28116158 GT ./. chr1 28120042 . A . . LowGQX END=28120146 GT ./. chr1 28128187 . A . . LowGQX END=28128367 GT ./. chr1 28136729 . A . . LowGQX END=28136829 GT ./. chr1 28138488 . T . . LowGQX END=28138588 GT ./. chr1 28138672 . A . . LowGQX END=28138782 GT ./. chr1 28144349 . T . . LowGQX END=28144449 GT ./. chr1 28146153 . T . . LowGQX END=28146253 GT ./. chr1 28148740 . A . . LowGQX END=28148843 GT ./. chr1 28157265 . G . . LowGQX END=28157425 GT ./. chr1 28159248 . T . . LowGQX END=28159348 GT ./. chr1 28160912 . C . . LowGQX END=28161078 GT ./. chr1 28165208 . A . . LowGQX END=28165316 GT ./. chr1 28165317 . C . . LowGQX END=28165366;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 28167523 . A . . LowGQX END=28167748 GT ./. chr1 28169695 . A . . LowGQX END=28169885 GT ./. chr1 28173522 . C . . LowGQX END=28173622 GT ./. chr1 28176602 . A . . LowGQX END=28176960 GT ./. chr1 28178050 . G . . LowGQX END=28178164 GT ./. chr1 28199020 . C . . LowGQX END=28199180 GT ./. chr1 28203097 . A . . LowGQX END=28203242 GT ./. chr1 28206153 . A . . LowGQX END=28206568 GT ./. chr1 28208480 . A . . LowGQX END=28209557 GT ./. chr1 28211804 . A . . LowGQX END=28211965 GT ./. chr1 28212356 . A . . LowGQX END=28212456 GT ./. chr1 28218667 . G . . LowGQX END=28218767 GT ./. chr1 28220521 . A . . LowGQX END=28220621 GT ./. chr1 28220799 . A . . LowGQX END=28220911 GT ./. chr1 28223514 . A . . LowGQX END=28223635 GT ./. chr1 28224132 . T . . LowGQX END=28224232 GT ./. chr1 28233437 . A . . LowGQX END=28233555 GT ./. chr1 28233690 . A . . LowGQX END=28233796 GT ./. chr1 28240572 . A . . LowGQX END=28240957 GT ./. chr1 28241105 . C . . LowGQX END=28241205 GT ./. chr1 28261676 . G . . LowGQX END=28261776 GT ./. chr1 28268781 . T . . LowGQX END=28268881 GT ./. chr1 28271741 . A . . LowGQX END=28271959 GT ./. chr1 28275471 . A . . LowGQX END=28275571 GT ./. chr1 28275574 . A . . LowGQX END=28275676 GT ./. chr1 28279724 . A . . LowGQX END=28279872 GT ./. chr1 28280863 . A . . LowGQX END=28281040 GT ./. chr1 28282193 . A . . LowGQX END=28282378 GT ./. chr1 28282458 . A . . LowGQX END=28282713 GT ./. chr1 28284985 . A . . LowGQX END=28285352 GT ./. chr1 28286579 . C . . LowGQX END=28286876 GT ./. chr1 28290006 . A . . LowGQX END=28290207 GT ./. chr1 28293012 . A . . LowGQX END=28293714 GT ./. chr1 28300968 . T . . LowGQX END=28301068 GT ./. chr1 28303792 . C . . LowGQX END=28303901 GT ./. chr1 28304883 . A . . LowGQX END=28304988 GT ./. chr1 28315044 . A . . LowGQX END=28315214 GT ./. chr1 28316206 . A . . LowGQX END=28316325 GT ./. chr1 28319869 . A . . LowGQX END=28320074 GT ./. chr1 28323811 . A . . LowGQX END=28323911 GT ./. chr1 28326466 . C . . LowGQX END=28326566 GT ./. chr1 28330839 . C . . LowGQX END=28330939 GT ./. chr1 28337456 . A . . LowGQX END=28337600 GT ./. chr1 28339620 . A . . LowGQX END=28339808 GT ./. chr1 28343658 . A . . LowGQX END=28343758 GT ./. chr1 28354298 . A . . LowGQX END=28354440 GT ./. chr1 28362053 . A . . LowGQX END=28362194 GT ./. chr1 28365334 . T . . LowGQX END=28365434 GT ./. chr1 28369072 . T . . LowGQX END=28369172 GT ./. chr1 28374866 . C . . LowGQX END=28374966 GT ./. chr1 28384472 . A . . LowGQX END=28384572 GT ./. chr1 28422253 . C . . LowGQX END=28422934 GT ./. chr1 28476502 . G . . LowGQX END=28477535 GT ./. chr1 28526972 . T . . LowGQX END=28527072 GT ./. chr1 28527079 . A . . LowGQX END=28527179 GT ./. chr1 28527757 . G . . LowGQX END=28527884 GT ./. chr1 28530246 . T . . LowGQX END=28530346 GT ./. chr1 28531765 . G . . LowGQX END=28531865 GT ./. chr1 28534839 . T . . LowGQX END=28534939 GT ./. chr1 28536481 . A . . LowGQX END=28536581 GT ./. chr1 28537066 . G . . LowGQX END=28537166 GT ./. chr1 28541430 . A . . LowGQX END=28541530 GT ./. chr1 28555431 . A . . LowGQX END=28555537 GT ./. chr1 28559421 . T . . LowGQX END=28559521 GT ./. chr1 28562689 . G . . LowGQX END=28562789 GT ./. chr1 28562869 . C . . LowGQX END=28563057 GT ./. chr1 28564241 . C . . LowGQX END=28564341 GT ./. chr1 28564346 . A . . LowGQX END=28564492 GT ./. chr1 28573014 . G . . LowGQX END=28573174 GT ./. chr1 28586354 . G . . LowGQX END=28586506 GT ./. chr1 28595677 . C . . LowGQX END=28595777 GT ./. chr1 28598183 . A . . LowGQX END=28598385 GT ./. chr1 28598793 . A . . LowGQX END=28598980 GT ./. chr1 28599090 . A . . LowGQX END=28599307 GT ./. chr1 28599867 . A . . LowGQX END=28600022 GT ./. chr1 28600549 . A . . LowGQX END=28600672 GT ./. chr1 28601334 . A . . LowGQX END=28601529 GT ./. chr1 28605606 . A . . LowGQX END=28605755 GT ./. chr1 28607221 . C . . LowGQX END=28607321 GT ./. chr1 28657102 . T . . LowGQX END=28657261 GT ./. chr1 28660907 . T . . LowGQX END=28661484 GT ./. chr1 28696189 . A . . LowGQX END=28696400 GT ./. chr1 28733917 . T . . LowGQX END=28734017 GT ./. chr1 28764869 . T . . LowGQX END=28764969 GT ./. chr1 28783775 . T . . LowGQX END=28783875 GT ./. chr1 28785592 . A . . LowGQX END=28785772 GT ./. chr1 28786714 . T . . LowGQX END=28786814 GT ./. chr1 28792194 . A . . LowGQX END=28792363 GT ./. chr1 28792891 . A . . LowGQX END=28793288 GT ./. chr1 28800064 . A . . LowGQX END=28800666 GT ./. chr1 28802617 . A . . LowGQX END=28802806 GT ./. chr1 28806961 . A . . LowGQX END=28807119 GT ./. chr1 28815660 . C . . LowGQX END=28815760 GT ./. chr1 28816285 . G . . LowGQX END=28816408 GT ./. chr1 28817444 . T . . LowGQX END=28817544 GT ./. chr1 28818090 . T . . LowGQX END=28818302 GT ./. chr1 28819516 . C . . LowGQX END=28819616 GT ./. chr1 28823004 . G . . LowGQX END=28823104 GT ./. chr1 28832471 . A . . LowGQX END=28832597 GT ./. chr1 28832676 . C . . LowGQX END=28832840 GT ./. chr1 28833877 . T . . LowGQX END=28834084 GT ./. chr1 28834607 . G . . LowGQX END=28834707 GT ./. chr1 28835070 . T . . LowGQX END=28835275 GT ./. chr1 28835342 . G . . LowGQX END=28835486 GT ./. chr1 28843309 . A . . LowGQX END=28843409 GT ./. chr1 28856362 . A . . LowGQX END=28856462 GT ./. chr1 28857032 . C . . LowGQX END=28857132 GT ./. chr1 28858313 . A . . LowGQX END=28858505 GT ./. chr1 28858681 . A . . LowGQX END=28858865 GT ./. chr1 28859178 . C . . LowGQX END=28859278 GT ./. chr1 28861560 . A . . LowGQX END=28861661 GT ./. chr1 28861768 . A . . LowGQX END=28861895 GT ./. chr1 28862081 . T . . LowGQX END=28862181 GT ./. chr1 28862381 . A . . LowGQX END=28862541 GT ./. chr1 28862772 . A . . LowGQX END=28862896 GT ./. chr1 28863257 . A . . LowGQX END=28863414 GT ./. chr1 28864342 . A . . LowGQX END=28864522 GT ./. chr1 28879527 . C . . LowGQX END=28879687 GT ./. chr1 28880150 . A . . LowGQX END=28880252 GT ./. chr1 28887143 . A . . LowGQX END=28887247 GT ./. chr1 28887835 . T . . LowGQX END=28887935 GT ./. chr1 28891213 . A . . LowGQX END=28891403 GT ./. chr1 28893754 . T . . LowGQX END=28893928 GT ./. chr1 28897686 . A . . LowGQX END=28897853 GT ./. chr1 28898346 . T . . LowGQX END=28898446 GT ./. chr1 28904010 . A . . LowGQX END=28904151 GT ./. chr1 28905245 . C . . LowGQX END=28905345 GT ./. chr1 28906276 . A . . LowGQX END=28906406 GT ./. chr1 28906893 . C . . LowGQX END=28907025 GT ./. chr1 28907432 . A . . LowGQX END=28907566 GT ./. chr1 28918952 . G . . LowGQX END=28919322 GT ./. chr1 28920205 . G . . LowGQX END=28920632 GT ./. chr1 28930019 . C . . LowGQX END=28930119 GT ./. chr1 28931845 . T . . LowGQX END=28931975 GT ./. chr1 28939757 . A . . LowGQX END=28939876 GT ./. chr1 28944393 . G . . LowGQX END=28944554 GT ./. chr1 28948364 . A . . LowGQX END=28948596 GT ./. chr1 28995214 . G . . LowGQX END=28995374 GT ./. chr1 29010123 . A . . LowGQX END=29010303 GT ./. chr1 29016584 . A . . LowGQX END=29016701 GT ./. chr1 29018095 . A . . LowGQX END=29018224 GT ./. chr1 29019452 . A . . LowGQX END=29019560 GT ./. chr1 29023437 . A . . LowGQX END=29023599 GT ./. chr1 29028948 . A . . LowGQX END=29029084 GT ./. chr1 29030702 . A . . LowGQX END=29030844 GT ./. chr1 29037030 . A . . LowGQX END=29037157 GT ./. chr1 29040583 . A . . LowGQX END=29041288 GT ./. chr1 29063537 . A . . LowGQX END=29063697 GT ./. chr1 29064133 . A . . LowGQX END=29064233 GT ./. chr1 29064761 . T . . LowGQX END=29064861 GT ./. chr1 29068913 . A . . LowGQX END=29070501 GT ./. chr1 29095403 . A . . LowGQX END=29095503 GT ./. chr1 29138894 . C . . LowGQX END=29139027 GT ./. chr1 29139028 . T . . LowGQX END=29139065;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 29139066 . G . . LowGQX END=29139125 GT ./. chr1 29185464 . A . . LowGQX END=29185818 GT ./. chr1 29189252 . A . . LowGQX END=29189798 GT ./. chr1 29213591 . G . . LowGQX END=29213742 GT ./. chr1 29313899 . G . . LowGQX END=29314469 GT ./. chr1 29319791 . T . . LowGQX END=29320106 GT ./. chr1 29323676 . A . . LowGQX END=29323883 GT ./. chr1 29338326 . T . . LowGQX END=29338471 GT ./. chr1 29342153 . A . . LowGQX END=29342331 GT ./. chr1 29344685 . A . . LowGQX END=29345006 GT ./. chr1 29356861 . A . . LowGQX END=29357051 GT ./. chr1 29359554 . T . . LowGQX END=29359809 GT ./. chr1 29362287 . A . . LowGQX END=29362487 GT ./. chr1 29365715 . G . . LowGQX END=29365990 GT ./. chr1 29379565 . T . . LowGQX END=29379906 GT ./. chr1 29385050 . A . . LowGQX END=29385209 GT ./. chr1 29385314 . G . . LowGQX END=29385414 GT ./. chr1 29386883 . A . . LowGQX END=29387048 GT ./. chr1 29391443 . T . . LowGQX END=29391692 GT ./. chr1 29424268 . C . . LowGQX END=29424499 GT ./. chr1 29435797 . T . . LowGQX END=29435991 GT ./. chr1 29438829 . T . . LowGQX END=29439002 GT ./. chr1 29442160 . T . . LowGQX END=29442361 GT ./. chr1 29447415 . C . . LowGQX END=29448347 GT ./. chr1 29474580 . C . . LowGQX END=29474680 GT ./. chr1 29474920 . A . . LowGQX END=29475741 GT ./. chr1 29476610 . C . . LowGQX END=29476710 GT ./. chr1 29481206 . A . . LowGQX END=29481425 GT ./. chr1 29485884 . A . . LowGQX END=29486001 GT ./. chr1 29486885 . A . . LowGQX END=29487032 GT ./. chr1 29508156 . A . . LowGQX END=29508267 GT ./. chr1 29520511 . T . . LowGQX END=29520694 GT ./. chr1 29522440 . G . . LowGQX END=29522540 GT ./. chr1 29522584 . A . . LowGQX END=29522773 GT ./. chr1 29527014 . C . . LowGQX END=29527114 GT ./. chr1 29527885 . C . . LowGQX END=29528031 GT ./. chr1 29528453 . A . . LowGQX END=29528560 GT ./. chr1 29529641 . A . . LowGQX END=29529748 GT ./. chr1 29533272 . A . . LowGQX END=29533420 GT ./. chr1 29542515 . A . . LowGQX END=29542651 GT ./. chr1 29543098 . A . . LowGQX END=29543200 GT ./. chr1 29557221 . C . . LowGQX END=29557421 GT ./. chr1 29563084 . C . . LowGQX END=29563244 GT ./. chr1 29581785 . A . . LowGQX END=29581921 GT ./. chr1 29585015 . A . . LowGQX END=29585291 GT ./. chr1 29585764 . C . . LowGQX END=29585864 GT ./. chr1 29585959 . A . . LowGQX END=29586079 GT ./. chr1 29586360 . C . . LowGQX END=29586559 GT ./. chr1 29587120 . A . . LowGQX END=29587418 GT ./. chr1 29601958 . A . . LowGQX END=29602271 GT ./. chr1 29605522 . A . . LowGQX END=29605636 GT ./. chr1 29605966 . A . . LowGQX END=29606172 GT ./. chr1 29606549 . A . . LowGQX END=29606656 GT ./. chr1 29609186 . A . . LowGQX END=29609464 GT ./. chr1 29610421 . G . . LowGQX END=29610521 GT ./. chr1 29611201 . C . . LowGQX END=29611384 GT ./. chr1 29616160 . C . . LowGQX END=29616260 GT ./. chr1 29618379 . A . . LowGQX END=29618541 GT ./. chr1 29630365 . A . . LowGQX END=29630560 GT ./. chr1 29631274 . T . . LowGQX END=29631374 GT ./. chr1 29631853 . T . . LowGQX END=29631953 GT ./. chr1 29632047 . G . . LowGQX END=29632147 GT ./. chr1 29633600 . T . . LowGQX END=29633700 GT ./. chr1 29637225 . G . . LowGQX END=29637325 GT ./. chr1 29637966 . A . . LowGQX END=29638068 GT ./. chr1 29638153 . A . . LowGQX END=29638274 GT ./. chr1 29639062 . A . . LowGQX END=29639221 GT ./. chr1 29641882 . A . . LowGQX END=29642022 GT ./. chr1 29642512 . A . . LowGQX END=29642666 GT ./. chr1 29644258 . A . . LowGQX END=29644458 GT ./. chr1 29647195 . A . . LowGQX END=29647340 GT ./. chr1 29649881 . A . . LowGQX END=29650011 GT ./. chr1 29650141 . A . . LowGQX END=29650303 GT ./. chr1 29651701 . A . . LowGQX END=29651841 GT ./. chr1 29652033 . C . . LowGQX END=29652193 GT ./. chr1 31186404 . G . . LowGQX END=31186504 GT ./. chr1 31187085 . A . . LowGQX END=31187185 GT ./. chr1 31188002 . A . . LowGQX END=31188159 GT ./. chr1 31188754 . A . . LowGQX END=31189175 GT ./. chr1 31189635 . A . . LowGQX END=31189765 GT ./. chr1 31191580 . A . . PASS . GT:DP:GQX:MQ 0/0:8:15:60 chr1 31191581 . C . . PASS END=31191591;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:10:18:60 chr1 31191592 . C . . PASS END=31191601;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:12:24:60 chr1 31191602 . T . . PASS END=31191611;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:17:30:60 chr1 31191612 . G . . LowGQX . GT:DP:GQX:MQ 0/0:21:3:60 chr1 31191613 . C . . PASS END=31191627;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:21:39:60 chr1 31191628 . G . . PASS END=31191679;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:23:42:60 chr1 31191680 . C . . PASS END=31191707;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:28:45:60 chr1 31191708 . C . . PASS END=31191745;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:32:51:60 chr1 31191746 . C . . PASS . GT:DP:GQX:MQ 0/0:37:22:60 chr1 31191747 . G . . PASS END=31191777;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:40:60:60 chr1 31191778 . C . . PASS END=31191807;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:33:51:60 chr1 31194250 . A . . LowGQX END=31194601 GT ./. chr1 31196242 . C . . LowGQX END=31196453 GT ./. chr1 31206383 . T . . LowGQX END=31206527 GT ./. chr1 31206610 . A . . LowGQX END=31206823 GT ./. chr1 31208017 . C . . LowGQX END=31208117 GT ./. chr1 31210449 . A . . LowGQX END=31210549 GT ./. chr1 31211785 . A . . LowGQX END=31211912 GT ./. chr1 31212614 . T . . LowGQX END=31212787 GT ./. chr1 31214476 . T . . LowGQX END=31214576 GT ./. chr1 31215300 . T . . LowGQX END=31215400 GT ./. chr1 31230440 . G . . LowGQX END=31230600 GT ./. chr1 31346056 . C . . LowGQX END=31346227 GT ./. chr1 31347142 . A . . LowGQX END=31347438 GT ./. chr1 31349397 . A . . LowGQX END=31350095 GT ./. chr1 31351468 . A . . LowGQX END=31351590 GT ./. chr1 31381264 . C . . LowGQX END=31381434 GT ./. chr1 31406056 . C . . LowGQX END=31406236 GT ./. chr1 31408529 . G . . LowGQX END=31408629 GT ./. chr1 31409488 . A . . LowGQX END=31409685 GT ./. chr1 31413996 . A . . LowGQX END=31414122 GT ./. chr1 31414770 . C . . LowGQX END=31414973 GT ./. chr1 31418191 . A . . LowGQX END=31418333 GT ./. chr1 31421958 . G . . LowGQX END=31422058 GT ./. chr1 31422973 . C . . LowGQX END=31423111 GT ./. chr1 31425079 . A . . LowGQX END=31425213 GT ./. chr1 31426559 . A . . LowGQX END=31426831 GT ./. chr1 31437519 . A . . LowGQX END=31437760 GT ./. chr1 31438827 . A . . LowGQX END=31439128 GT ./. chr1 31440012 . A . . LowGQX END=31440160 GT ./. chr1 31440998 . A . . LowGQX END=31441098 GT ./. chr1 31441199 . A . . LowGQX END=31441399 GT ./. chr1 31445854 . G . . LowGQX END=31445954 GT ./. chr1 31447496 . A . . LowGQX END=31447652 GT ./. chr1 31452907 . A . . LowGQX END=31453076 GT ./. chr1 31454156 . T . . LowGQX END=31454256 GT ./. chr1 31465235 . A . . LowGQX END=31465510 GT ./. chr1 31467899 . A . . LowGQX END=31468070 GT ./. chr1 31478698 . A . . LowGQX END=31478881 GT ./. chr1 31479839 . A . . LowGQX END=31479952 GT ./. chr1 31501628 . C . . LowGQX END=31501728 GT ./. chr1 31528174 . G . . LowGQX END=31528274 GT ./. chr1 31532049 . A . . LowGQX END=31532425 GT ./. chr1 31538464 . G . . LowGQX END=31538634 GT ./. chr1 31654505 . G . . LowGQX END=31654605 GT ./. chr1 31654698 . G . . LowGQX END=31654798 GT ./. chr1 31655358 . C . . LowGQX END=31655458 GT ./. chr1 31656662 . A . . LowGQX END=31656864 GT ./. chr1 31658085 . G . . LowGQX END=31658185 GT ./. chr1 31660895 . A . . LowGQX END=31661035 GT ./. chr1 31712258 . A . . LowGQX END=31712418 GT ./. chr1 31732483 . T . . LowGQX END=31732971 GT ./. chr1 31733817 . A . . LowGQX END=31734024 GT ./. chr1 31734374 . A . . LowGQX END=31734482 GT ./. chr1 31740646 . T . . LowGQX END=31740799 GT ./. chr1 31742003 . A . . LowGQX END=31742173 GT ./. chr1 31744224 . A . . LowGQX END=31744349 GT ./. chr1 31754219 . A . . LowGQX END=31754346 GT ./. chr1 31762099 . A . . LowGQX END=31762269 GT ./. chr1 31764757 . C . . LowGQX END=31764857 GT ./. chr1 31766024 . C . . LowGQX END=31766198 GT ./. chr1 31769456 . A . . LowGQX END=31769636 GT ./. chr1 31782929 . G . . LowGQX END=31783029 GT ./. chr1 31791013 . G . . LowGQX END=31791113 GT ./. chr1 31791935 . T . . LowGQX END=31792035 GT ./. chr1 31810020 . A . . LowGQX END=31810125 GT ./. chr1 31811800 . T . . LowGQX END=31811900 GT ./. chr1 31819485 . A . . LowGQX END=31819666 GT ./. chr1 31821634 . A . . LowGQX END=31821824 GT ./. chr1 31836877 . A . . LowGQX END=31837043 GT ./. chr1 31838710 . T . . LowGQX END=31838810 GT ./. chr1 31840238 . A . . LowGQX END=31840344 GT ./. chr1 31842230 . A . . LowGQX END=31842407 GT ./. chr1 31845776 . G . . LowGQX END=31845876 GT ./. chr1 31882582 . G . . LowGQX END=31882742 GT ./. chr1 31883207 . A . . LowGQX END=31883307 GT ./. chr1 31886022 . C . . LowGQX END=31886182 GT ./. chr1 31886776 . T . . LowGQX END=31886936 GT ./. chr1 31896538 . A . . LowGQX END=31896704 GT ./. chr1 31897528 . A . . LowGQX END=31897723 GT ./. chr1 31898167 . C . . LowGQX END=31898267 GT ./. chr1 31898621 . A . . LowGQX END=31898852 GT ./. chr1 31899499 . A . . LowGQX END=31899673 GT ./. chr1 31901821 . C . . LowGQX END=31901921 GT ./. chr1 31902242 . A . . LowGQX END=31902388 GT ./. chr1 31905812 . A . . LowGQX END=31906035 GT ./. chr1 31906909 . A . . LowGQX END=31907049 GT ./. chr1 31971857 . A . . LowGQX END=31972013 GT ./. chr1 31973035 . T . . LowGQX END=31973183 GT ./. chr1 31973317 . G . . LowGQX END=31973448 GT ./. chr1 32042748 . C . . LowGQX END=32043062 GT ./. chr1 32044787 . T . . LowGQX END=32044887 GT ./. chr1 32045888 . G . . LowGQX END=32046340 GT ./. chr1 32048747 . C . . LowGQX END=32048847 GT ./. chr1 32049060 . A . . LowGQX END=32049179 GT ./. chr1 32050277 . A . . LowGQX END=32050405 GT ./. chr1 32050485 . A . . LowGQX END=32050640 GT ./. chr1 32050750 . A . . LowGQX END=32050944 GT ./. chr1 32051014 . G . . LowGQX END=32051114 GT ./. chr1 32051352 . A . . LowGQX END=32051482 GT ./. chr1 32052224 . G . . LowGQX END=32052384 GT ./. chr1 32052407 . A . . LowGQX END=32052618 GT ./. chr1 32084792 . T . . LowGQX END=32084995 GT ./. chr1 32085111 . T . . LowGQX END=32085314 GT ./. chr1 32086442 . A . . LowGQX END=32086690 GT ./. chr1 32087076 . A . . LowGQX END=32087196 GT ./. chr1 32089122 . A . . LowGQX END=32089353 GT ./. chr1 32090596 . A . . LowGQX END=32090722 GT ./. chr1 32092389 . A . . LowGQX END=32092584 GT ./. chr1 32092886 . G . . LowGQX END=32092986 GT ./. chr1 32096212 . G . . LowGQX END=32096446 GT ./. chr1 32097920 . T . . LowGQX END=32098242 GT ./. chr1 32098758 . A . . LowGQX END=32098918 GT ./. chr1 32100446 . T . . LowGQX END=32100546 GT ./. chr1 32100821 . A . . LowGQX END=32101126 GT ./. chr1 32110404 . C . . LowGQX END=32110504 GT ./. chr1 32118250 . T . . LowGQX END=32118457 GT ./. chr1 32119189 . G . . LowGQX END=32119289 GT ./. chr1 32119466 . A . . LowGQX END=32119647 GT ./. chr1 32120321 . G . . LowGQX END=32120477 GT ./. chr1 32120913 . A . . LowGQX END=32121106 GT ./. chr1 32121919 . T . . LowGQX END=32122074 GT ./. chr1 32122602 . C . . LowGQX END=32122702 GT ./. chr1 32124017 . T . . LowGQX END=32124236 GT ./. chr1 32124491 . G . . LowGQX END=32124591 GT ./. chr1 32126163 . G . . LowGQX END=32126263 GT ./. chr1 32126644 . C . . LowGQX END=32126744 GT ./. chr1 32126988 . T . . LowGQX END=32127088 GT ./. chr1 32127179 . G . . LowGQX END=32127334 GT ./. chr1 32127852 . T . . LowGQX END=32128012 GT ./. chr1 32128174 . G . . LowGQX END=32128274 GT ./. chr1 32130701 . T . . LowGQX END=32130855 GT ./. chr1 32131092 . A . . LowGQX END=32131252 GT ./. chr1 32131460 . G . . LowGQX END=32131711 GT ./. chr1 32133153 . A . . LowGQX END=32133304 GT ./. chr1 32133743 . C . . LowGQX END=32133894 GT ./. chr1 32134320 . G . . LowGQX END=32134480 GT ./. chr1 32136116 . G . . LowGQX END=32136331 GT ./. chr1 32137189 . G . . LowGQX END=32137289 GT ./. chr1 32138011 . T . . LowGQX END=32138111 GT ./. chr1 32138168 . G . . LowGQX END=32138268 GT ./. chr1 32138323 . A . . LowGQX END=32138444 GT ./. chr1 32138470 . G . . LowGQX END=32138570 GT ./. chr1 32140575 . C . . LowGQX END=32140675 GT ./. chr1 32140836 . A . . LowGQX END=32140936 GT ./. chr1 32145055 . C . . LowGQX END=32145289 GT ./. chr1 32145379 . C . . LowGQX END=32145479 GT ./. chr1 32145623 . G . . LowGQX END=32145723 GT ./. chr1 32146470 . C . . LowGQX END=32146570 GT ./. chr1 32146597 . C . . LowGQX END=32146697 GT ./. chr1 32148520 . A . . LowGQX END=32148620 GT ./. chr1 32148772 . T . . LowGQX END=32148872 GT ./. chr1 32148903 . G . . LowGQX END=32149003 GT ./. chr1 32149279 . G . . LowGQX END=32149379 GT ./. chr1 32149528 . A . . LowGQX END=32149628 GT ./. chr1 32149708 . A . . LowGQX END=32149835 GT ./. chr1 32150122 . A . . LowGQX END=32150234 GT ./. chr1 32150390 . G . . LowGQX END=32150490 GT ./. chr1 32151238 . A . . LowGQX END=32151374 GT ./. chr1 32151665 . C . . LowGQX END=32151762 GT ./. chr1 32151763 . G . . LowGQX END=32151765;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 32151813 . T . . LowGQX END=32151815;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 32151816 . C . . LowGQX END=32151913 GT ./. chr1 32151918 . T . . LowGQX END=32152018 GT ./. chr1 32154036 . C . . LowGQX END=32154136 GT ./. chr1 32154284 . A . . LowGQX END=32154384 GT ./. chr1 32154457 . C . . LowGQX END=32154575 GT ./. chr1 32154619 . G . . LowGQX END=32154719 GT ./. chr1 32155340 . A . . LowGQX END=32155455 GT ./. chr1 32155932 . C . . LowGQX END=32156032 GT ./. chr1 32156103 . C . . LowGQX END=32156203 GT ./. chr1 32156759 . C . . LowGQX END=32156859 GT ./. chr1 32156956 . T . . LowGQX END=32157272 GT ./. chr1 32157588 . A . . LowGQX END=32157688 GT ./. chr1 32158043 . G . . LowGQX END=32158143 GT ./. chr1 32158172 . C . . LowGQX END=32158272 GT ./. chr1 32158339 . C . . LowGQX END=32158439 GT ./. chr1 32158675 . C . . LowGQX END=32158775 GT ./. chr1 32158782 . A . . LowGQX END=32158882 GT ./. chr1 32159653 . G . . LowGQX END=32159809 GT ./. chr1 32160747 . C . . LowGQX END=32160847 GT ./. chr1 32161266 . C . . LowGQX END=32161426 GT ./. chr1 32161666 . C . . LowGQX END=32161766 GT ./. chr1 32162562 . A . . LowGQX END=32162692 GT ./. chr1 32162812 . G . . LowGQX END=32162912 GT ./. chr1 32163505 . A . . LowGQX END=32163776 GT ./. chr1 32164082 . A . . LowGQX END=32164210 GT ./. chr1 32165412 . A . . LowGQX END=32165534 GT ./. chr1 32165630 . T . . LowGQX END=32165730 GT ./. chr1 32167709 . T . . LowGQX END=32167809 GT ./. chr1 32192949 . G . . LowGQX END=32193209 GT ./. chr1 32193586 . C . . LowGQX END=32193686 GT ./. chr1 32193781 . A . . LowGQX END=32193884 GT ./. chr1 32194167 . G . . LowGQX END=32194267 GT ./. chr1 32196399 . A . . LowGQX END=32197023 GT ./. chr1 32197686 . C . . LowGQX END=32197786 GT ./. chr1 32198116 . A . . LowGQX END=32198216 GT ./. chr1 32198571 . A . . LowGQX END=32198747 GT ./. chr1 32200772 . G . . LowGQX END=32201269 GT ./. chr1 32201412 . C . . LowGQX END=32201512 GT ./. chr1 32201907 . G . . LowGQX END=32202007 GT ./. chr1 32202172 . A . . LowGQX END=32202327 GT ./. chr1 32203028 . G . . LowGQX END=32203135 GT ./. chr1 32203251 . A . . LowGQX END=32203359 GT ./. chr1 32203799 . A . . LowGQX END=32203930 GT ./. chr1 32204160 . C . . LowGQX END=32204260 GT ./. chr1 32204376 . G . . LowGQX END=32204541 GT ./. chr1 32204907 . A . . LowGQX END=32205239 GT ./. chr1 32205525 . A . . LowGQX END=32205638 GT ./. chr1 32205696 . A . . LowGQX END=32205796 GT ./. chr1 32205946 . A . . LowGQX END=32206145 GT ./. chr1 32206972 . A . . LowGQX END=32207083 GT ./. chr1 32207223 . A . . LowGQX END=32207329 GT ./. chr1 32207399 . A . . LowGQX END=32207571 GT ./. chr1 32207652 . A . . LowGQX END=32207821 GT ./. chr1 32208437 . A . . LowGQX END=32208606 GT ./. chr1 32209792 . A . . LowGQX END=32209982 GT ./. chr1 32210241 . C . . LowGQX END=32210341 GT ./. chr1 32221598 . A . . LowGQX END=32222419 GT ./. chr1 32222763 . G . . LowGQX END=32222863 GT ./. chr1 32224887 . C . . LowGQX END=32224987 GT ./. chr1 32230281 . C . . LowGQX END=32230404 GT ./. chr1 32256191 . T . . LowGQX END=32256895 GT ./. chr1 32257733 . C . . LowGQX END=32258042 GT ./. chr1 32258274 . G . . LowGQX END=32258426 GT ./. chr1 32258877 . A . . LowGQX END=32259032 GT ./. chr1 32259100 . T . . LowGQX END=32259501 GT ./. chr1 32259723 . A . . LowGQX END=32259839 GT ./. chr1 32262095 . T . . LowGQX END=32262319 GT ./. chr1 32263786 . C . . LowGQX END=32263985 GT ./. chr1 32264041 . A . . LowGQX END=32264382 GT ./. chr1 32264995 . G . . LowGQX END=32265095 GT ./. chr1 32265388 . G . . LowGQX END=32265488 GT ./. chr1 32265565 . C . . LowGQX END=32265785 GT ./. chr1 32266040 . A . . LowGQX END=32266221 GT ./. chr1 32267236 . A . . LowGQX END=32267336 GT ./. chr1 32279550 . A . . LowGQX END=32280937 GT ./. chr1 32374451 . T . . LowGQX END=32374564 GT ./. chr1 32375627 . C . . LowGQX END=32375727 GT ./. chr1 32377295 . A . . LowGQX END=32377430 GT ./. chr1 32378566 . G . . LowGQX END=32378666 GT ./. chr1 32379391 . C . . LowGQX END=32379491 GT ./. chr1 32379734 . C . . LowGQX END=32380053 GT ./. chr1 32381493 . C . . LowGQX END=32381593 GT ./. chr1 32384569 . A . . LowGQX END=32384669 GT ./. chr1 32479584 . C . . LowGQX END=32479981 GT ./. chr1 32495897 . A . . LowGQX END=32496026 GT ./. chr1 32497123 . A . . LowGQX END=32497244 GT ./. chr1 32498787 . A . . LowGQX END=32498938 GT ./. chr1 32502509 . A . . LowGQX END=32502647 GT ./. chr1 32503434 . A . . LowGQX END=32503640 GT ./. chr1 32504137 . G . . LowGQX END=32504237 GT ./. chr1 32505096 . A . . LowGQX END=32505196 GT ./. chr1 32508126 . A . . LowGQX END=32508228 GT ./. chr1 32538541 . A . . LowGQX END=32538701 GT ./. chr1 32540551 . G . . LowGQX END=32540679 GT ./. chr1 32541203 . G . . LowGQX END=32541424 GT ./. chr1 32542195 . G . . LowGQX END=32542295 GT ./. chr1 32542357 . C . . LowGQX END=32542457 GT ./. chr1 32542763 . A . . LowGQX END=32542922 GT ./. chr1 32557274 . A . . LowGQX END=32557615 GT ./. chr1 32560383 . A . . LowGQX END=32560575 GT ./. chr1 32566041 . A . . LowGQX END=32566302 GT ./. chr1 32568030 . A . . LowGQX END=32568277 GT ./. chr1 32573684 . A . . LowGQX END=32573784 GT ./. chr1 32608566 . T . . LowGQX END=32608666 GT ./. chr1 32620187 . A . . LowGQX END=32620325 GT ./. chr1 32622451 . C . . LowGQX END=32622551 GT ./. chr1 32622945 . A . . LowGQX END=32623049 GT ./. chr1 32623866 . A . . LowGQX END=32623966 GT ./. chr1 32624999 . A . . LowGQX END=32625135 GT ./. chr1 32626211 . T . . LowGQX END=32626311 GT ./. chr1 32627546 . A . . LowGQX END=32627650 GT ./. chr1 32627960 . A . . LowGQX END=32628149 GT ./. chr1 32628826 . T . . LowGQX END=32628926 GT ./. chr1 32631704 . A . . LowGQX END=32631834 GT ./. chr1 32632768 . A . . LowGQX END=32632900 GT ./. chr1 32635481 . A . . LowGQX END=32635664 GT ./. chr1 32636306 . A . . LowGQX END=32636498 GT ./. chr1 32645945 . C . . LowGQX END=32646118 GT ./. chr1 32646841 . A . . LowGQX END=32647181 GT ./. chr1 32650122 . T . . LowGQX END=32650222 GT ./. chr1 32653553 . A . . LowGQX END=32653728 GT ./. chr1 32655654 . A . . LowGQX END=32655853 GT ./. chr1 32657910 . A . . LowGQX END=32658034 GT ./. chr1 32658246 . T . . LowGQX END=32658346 GT ./. chr1 32658806 . C . . LowGQX END=32658906 GT ./. chr1 32659664 . A . . LowGQX END=32659764 GT ./. chr1 32660501 . A . . LowGQX END=32660799 GT ./. chr1 32661276 . G . . LowGQX END=32661408 GT ./. chr1 32667535 . C . . LowGQX END=32667703 GT ./. chr1 32667815 . G . . LowGQX END=32667915 GT ./. chr1 32669478 . A . . LowGQX END=32669649 GT ./. chr1 32669774 . G . . LowGQX END=32669983 GT ./. chr1 32670197 . A . . LowGQX END=32670400 GT ./. chr1 32670773 . C . . LowGQX END=32670873 GT ./. chr1 32671281 . C . . LowGQX END=32671565 GT ./. chr1 32671753 . A . . LowGQX END=32671901 GT ./. chr1 32672108 . A . . LowGQX END=32672365 GT ./. chr1 32672601 . A . . LowGQX END=32672724 GT ./. chr1 32672839 . A . . LowGQX END=32673686 GT ./. chr1 32674694 . T . . LowGQX END=32674961 GT ./. chr1 32676792 . C . . LowGQX END=32676949 GT ./. chr1 32677350 . C . . LowGQX END=32677450 GT ./. chr1 32677670 . G . . LowGQX END=32677803 GT ./. chr1 32678090 . G . . LowGQX END=32678238 GT ./. chr1 32678325 . C . . LowGQX END=32678425 GT ./. chr1 32680397 . G . . LowGQX END=32680534 GT ./. chr1 32681040 . G . . LowGQX END=32681145 GT ./. chr1 32681401 . A . . LowGQX END=32681552 GT ./. chr1 32682010 . T . . LowGQX END=32682119 GT ./. chr1 32682452 . A . . LowGQX END=32682552 GT ./. chr1 32682567 . A . . LowGQX END=32682955 GT ./. chr1 32683103 . C . . LowGQX END=32683203 GT ./. chr1 32686716 . C . . LowGQX END=32686816 GT ./. chr1 32687436 . C . . LowGQX END=32687622 GT ./. chr1 32687866 . G . . LowGQX END=32687966 GT ./. chr1 32687995 . C . . LowGQX END=32688095 GT ./. chr1 32688136 . C . . LowGQX END=32688236 GT ./. chr1 32689629 . T . . LowGQX END=32689729 GT ./. chr1 32689994 . T . . LowGQX END=32690094 GT ./. chr1 32691770 . A . . LowGQX END=32691924 GT ./. chr1 32692002 . A . . LowGQX END=32692134 GT ./. chr1 32694098 . A . . LowGQX END=32694213 GT ./. chr1 32694323 . T . . LowGQX END=32694423 GT ./. chr1 32694723 . T . . LowGQX END=32694823 GT ./. chr1 32696466 . C . . LowGQX END=32696625 GT ./. chr1 32696707 . T . . LowGQX END=32696807 GT ./. chr1 32713021 . C . . LowGQX END=32713286 GT ./. chr1 32713970 . A . . LowGQX END=32714205 GT ./. chr1 32739798 . A . . LowGQX END=32740038 GT ./. chr1 32740336 . A . . LowGQX END=32740687 GT ./. chr1 32740920 . A . . LowGQX END=32741023 GT ./. chr1 32741168 . A . . LowGQX END=32741276 GT ./. chr1 32741513 . A . . LowGQX END=32741667 GT ./. chr1 32741936 . A . . LowGQX END=32742093 GT ./. chr1 32742206 . A . . LowGQX END=32742390 GT ./. chr1 32745181 . G . . LowGQX END=32745351 GT ./. chr1 32745440 . A . . LowGQX END=32745598 GT ./. chr1 32745678 . A . . LowGQX END=32745814 GT ./. chr1 32751113 . A . . LowGQX END=32751320 GT ./. chr1 32757746 . A . . LowGQX END=32757846 GT ./. chr1 32768220 . A . . LowGQX END=32768337 GT ./. chr1 32782264 . A . . LowGQX END=32782386 GT ./. chr1 32790068 . A . . LowGQX END=32790168 GT ./. chr1 32792538 . A . . LowGQX END=32792681 GT ./. chr1 32793135 . A . . LowGQX END=32793357 GT ./. chr1 32794666 . T . . LowGQX END=32794766 GT ./. chr1 32796177 . A . . LowGQX END=32796290 GT ./. chr1 32796367 . A . . LowGQX END=32796512 GT ./. chr1 32797073 . A . . LowGQX END=32797186 GT ./. chr1 32797275 . A . . LowGQX END=32797410 GT ./. chr1 32797689 . A . . LowGQX END=32797846 GT ./. chr1 32798277 . C . . LowGQX END=32798377 GT ./. chr1 32798582 . T . . LowGQX END=32798682 GT ./. chr1 32800196 . A . . LowGQX END=32800701 GT ./. chr1 32801485 . G . . LowGQX END=32801696 GT ./. chr1 32826993 . T . . LowGQX END=32827166 GT ./. chr1 32827299 . G . . LowGQX END=32827478 GT ./. chr1 32827518 . G . . LowGQX END=32827693 GT ./. chr1 32828301 . G . . LowGQX END=32828450 GT ./. chr1 32829194 . A . . LowGQX END=32829860 GT ./. chr1 32832026 . G . . LowGQX END=32832126 GT ./. chr1 32832189 . G . . LowGQX END=32832289 GT ./. chr1 32833932 . T . . LowGQX END=32834154 GT ./. chr1 32834826 . A . . LowGQX END=32834940 GT ./. chr1 32841861 . A . . LowGQX END=32842345 GT ./. chr1 32843561 . C . . LowGQX END=32843661 GT ./. chr1 32843801 . G . . LowGQX END=32843901 GT ./. chr1 32844323 . A . . LowGQX END=32844443 GT ./. chr1 32846793 . C . . LowGQX END=32846893 GT ./. chr1 32849429 . A . . LowGQX END=32849652 GT ./. chr1 32852378 . A . . LowGQX END=32852499 GT ./. chr1 32859662 . G . . LowGQX END=32859762 GT ./. chr1 32859961 . G . . LowGQX END=32860061 GT ./. chr1 32936225 . A . . LowGQX END=32937217 GT ./. chr1 32946491 . G . . LowGQX END=32946671 GT ./. chr1 32950701 . G . . LowGQX END=32951020 GT ./. chr1 33001710 . G . . LowGQX END=33001862 GT ./. chr1 33001998 . T . . LowGQX END=33002158 GT ./. chr1 33058531 . G . . LowGQX END=33059358 GT ./. chr1 33060653 . A . . LowGQX END=33060827 GT ./. chr1 33065686 . A . . LowGQX END=33066023 GT ./. chr1 33087401 . T . . LowGQX END=33087557 GT ./. chr1 33093078 . A . . LowGQX END=33093178 GT ./. chr1 33097346 . T . . LowGQX END=33097505 GT ./. chr1 33099238 . T . . LowGQX END=33099338 GT ./. chr1 33099550 . A . . LowGQX END=33099676 GT ./. chr1 33100332 . A . . LowGQX END=33100432 GT ./. chr1 33116032 . A . . LowGQX END=33116169 GT ./. chr1 33116806 . G . . LowGQX END=33116966 GT ./. chr1 33117513 . A . . LowGQX END=33117665 GT ./. chr1 33123026 . A . . LowGQX END=33123176 GT ./. chr1 33127798 . T . . LowGQX END=33127898 GT ./. chr1 33133824 . A . . LowGQX END=33134002 GT ./. chr1 33134338 . A . . LowGQX END=33134458 GT ./. chr1 33134571 . A . . LowGQX END=33134736 GT ./. chr1 33134830 . A . . LowGQX END=33134961 GT ./. chr1 33135076 . T . . LowGQX END=33135176 GT ./. chr1 33138040 . C . . LowGQX END=33138140 GT ./. chr1 33138222 . A . . LowGQX END=33138322 GT ./. chr1 33138390 . A . . LowGQX END=33138505 GT ./. chr1 33139019 . G . . LowGQX END=33139182 GT ./. chr1 33145236 . G . . LowGQX END=33145413 GT ./. chr1 33146087 . A . . LowGQX END=33146187 GT ./. chr1 33147376 . A . . LowGQX END=33147476 GT ./. chr1 33149601 . C . . LowGQX END=33149701 GT ./. chr1 33149857 . A . . LowGQX END=33149986 GT ./. chr1 33160464 . A . . LowGQX END=33161646 GT ./. chr1 33168125 . C . . LowGQX END=33168285 GT ./. chr1 33207483 . C . . LowGQX END=33207853 GT ./. chr1 33219626 . T . . LowGQX END=33219786 GT ./. chr1 33231290 . G . . LowGQX END=33231450 GT ./. chr1 33233386 . A . . LowGQX END=33233561 GT ./. chr1 33233641 . A . . LowGQX END=33233741 GT ./. chr1 33234251 . A . . LowGQX END=33234252;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 33234253 . T . . LowGQX . GT ./. chr1 33234254 . C . . LowGQX END=33234270;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 33234271 . G . . LowGQX END=33234273 GT ./. chr1 33234274 . G . . LowGQX END=33234332;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 33234333 . A . . LowGQX END=33234379 GT ./. chr1 33235221 . A . . LowGQX END=33235390 GT ./. chr1 33235468 . C . . LowGQX END=33238045 GT ./. chr1 33238428 . A . . LowGQX END=33238528 GT ./. chr1 33241531 . G . . LowGQX END=33241744 GT ./. chr1 33244932 . G . . LowGQX END=33245176 GT ./. chr1 33245635 . A . . LowGQX END=33245931 GT ./. chr1 33246598 . G . . LowGQX END=33246808 GT ./. chr1 33247954 . T . . LowGQX END=33248192 GT ./. chr1 33251912 . A . . LowGQX END=33252100 GT ./. chr1 33252490 . C . . LowGQX END=33252728 GT ./. chr1 33256712 . T . . LowGQX END=33256907 GT ./. chr1 33263313 . C . . LowGQX END=33263486 GT ./. chr1 33272032 . A . . LowGQX END=33272264 GT ./. chr1 33276141 . A . . LowGQX END=33276419 GT ./. chr1 33276461 . C . . LowGQX END=33276710 GT ./. chr1 33282737 . G . . LowGQX END=33282897 GT ./. chr1 33291699 . A . . LowGQX END=33292534 GT ./. chr1 33293589 . A . . LowGQX END=33293689 GT ./. chr1 33295563 . A . . LowGQX END=33295671 GT ./. chr1 33299587 . T . . LowGQX END=33299687 GT ./. chr1 33318674 . T . . LowGQX END=33318774 GT ./. chr1 33321523 . A . . LowGQX END=33321642 GT ./. chr1 33329296 . A . . LowGQX END=33329396 GT ./. chr1 33329848 . C . . LowGQX END=33329948 GT ./. chr1 33330210 . A . . LowGQX END=33330401 GT ./. chr1 33333349 . C . . LowGQX END=33333449 GT ./. chr1 33333789 . G . . LowGQX END=33333977 GT ./. chr1 33354498 . C . . LowGQX END=33354880 GT ./. chr1 33359123 . A . . LowGQX END=33359233 GT ./. chr1 33359364 . A . . LowGQX END=33359466 GT ./. chr1 33360394 . G . . LowGQX END=33360494 GT ./. chr1 33360904 . A . . LowGQX END=33361043 GT ./. chr1 33361154 . A . . LowGQX END=33361347 GT ./. chr1 33361491 . T . . LowGQX END=33361591 GT ./. chr1 33363725 . A . . LowGQX END=33363923 GT ./. chr1 33366722 . G . . LowGQX END=33366882 GT ./. chr1 33402405 . C . . LowGQX END=33402950 GT ./. chr1 33403876 . A . . LowGQX END=33403976 GT ./. chr1 33403996 . A . . LowGQX END=33404132 GT ./. chr1 33407851 . A . . LowGQX END=33408063 GT ./. chr1 33409618 . A . . LowGQX END=33409808 GT ./. chr1 33411113 . A . . LowGQX END=33411232 GT ./. chr1 33412001 . A . . LowGQX END=33412168 GT ./. chr1 33413821 . A . . LowGQX END=33413970 GT ./. chr1 33415168 . A . . LowGQX END=33415378 GT ./. chr1 33429650 . A . . LowGQX END=33430291 GT ./. chr1 33473540 . C . . LowGQX END=33476486 GT ./. chr1 33476825 . A . . LowGQX END=33479055 GT ./. chr1 33480072 . G . . LowGQX END=33480247 GT ./. chr1 33485681 . G . . LowGQX END=33485781 GT ./. chr1 33486917 . G . . LowGQX END=33487114 GT ./. chr1 33487143 . G . . LowGQX END=33487356 GT ./. chr1 33489992 . C . . LowGQX END=33490220 GT ./. chr1 33497144 . C . . LowGQX END=33497297 GT ./. chr1 33502286 . T . . LowGQX END=33502513 GT ./. chr1 33547798 . G . . LowGQX END=33547958 GT ./. chr1 33549519 . A . . LowGQX END=33549731 GT ./. chr1 33557649 . A . . LowGQX END=33557826 GT ./. chr1 33558846 . G . . LowGQX END=33559020 GT ./. chr1 33560147 . A . . LowGQX END=33560317 GT ./. chr1 33562306 . A . . LowGQX END=33562473 GT ./. chr1 33563607 . G . . LowGQX END=33563783 GT ./. chr1 33567414 . T . . LowGQX END=33567514 GT ./. chr1 33583430 . G . . LowGQX END=33583790 GT ./. chr1 33585612 . T . . LowGQX END=33585786 GT ./. chr1 33611434 . C . . LowGQX END=33611534 GT ./. chr1 33612776 . G . . LowGQX END=33613331 GT ./. chr1 33623852 . A . . LowGQX END=33623972 GT ./. chr1 33625287 . A . . LowGQX END=33625548 GT ./. chr1 33631070 . A . . LowGQX END=33631170 GT ./. chr1 33641981 . T . . LowGQX END=33642081 GT ./. chr1 33646624 . A . . LowGQX END=33647036 GT ./. chr1 33736145 . A . . LowGQX END=33736245 GT ./. chr1 33741683 . G . . LowGQX END=33741783 GT ./. chr1 33741947 . A . . LowGQX END=33742198 GT ./. chr1 33745723 . A . . LowGQX END=33746061 GT ./. chr1 33747186 . A . . LowGQX END=33747415 GT ./. chr1 33760528 . C . . LowGQX END=33760628 GT ./. chr1 33760746 . A . . LowGQX END=33760909 GT ./. chr1 33764529 . A . . LowGQX END=33764650 GT ./. chr1 33772367 . C . . LowGQX END=33773055 GT ./. chr1 33777653 . C . . LowGQX END=33777791 GT ./. chr1 33778097 . C . . LowGQX END=33778197 GT ./. chr1 33778400 . G . . LowGQX END=33778500 GT ./. chr1 33786639 . C . . LowGQX END=33786739 GT ./. chr1 33790464 . C . . LowGQX END=33790623 GT ./. chr1 33791425 . T . . LowGQX END=33791563 GT ./. chr1 33794469 . A . . LowGQX END=33794750 GT ./. chr1 33795670 . A . . LowGQX END=33795816 GT ./. chr1 33796947 . A . . LowGQX END=33797066 GT ./. chr1 33797874 . A . . LowGQX END=33798008 GT ./. chr1 33799619 . G . . LowGQX END=33799959 GT ./. chr1 33815165 . T . . LowGQX END=33815523 GT ./. chr1 33820000 . A . . LowGQX END=33820170 GT ./. chr1 33820438 . C . . LowGQX END=33820857 GT ./. chr1 33832715 . A . . LowGQX END=33833032 GT ./. chr1 33834131 . C . . LowGQX END=33834284 GT ./. chr1 33836020 . A . . LowGQX END=33836189 GT ./. chr1 33836607 . A . . LowGQX END=33836707 GT ./. chr1 33837888 . A . . LowGQX END=33838051 GT ./. chr1 33840965 . A . . LowGQX END=33841143 GT ./. chr1 33944888 . C . . LowGQX END=33945309 GT ./. chr1 33954052 . T . . LowGQX END=33954263 GT ./. chr1 33954704 . C . . LowGQX END=33954804 GT ./. chr1 33955111 . C . . LowGQX END=33955211 GT ./. chr1 33956623 . A . . LowGQX END=33957323 GT ./. chr1 33958785 . A . . LowGQX END=33959218 GT ./. chr1 33959816 . A . . LowGQX END=33961079 GT ./. chr1 33985116 . G . . LowGQX END=33985280 GT ./. chr1 33985410 . A . . LowGQX END=33985553 GT ./. chr1 33987057 . A . . LowGQX END=33987157 GT ./. chr1 33988905 . A . . LowGQX END=33989022 GT ./. chr1 33990480 . A . . LowGQX END=33990646 GT ./. chr1 33992718 . A . . LowGQX END=33992878 GT ./. chr1 33998648 . A . . LowGQX END=33998848 GT ./. chr1 33999394 . A . . LowGQX END=33999510 GT ./. chr1 34002609 . C . . LowGQX END=34002709 GT ./. chr1 34003034 . A . . LowGQX END=34003212 GT ./. chr1 34006123 . A . . LowGQX END=34006301 GT ./. chr1 34006728 . A . . LowGQX END=34006912 GT ./. chr1 34008318 . A . . LowGQX END=34008499 GT ./. chr1 34011635 . A . . LowGQX END=34011822 GT ./. chr1 34015775 . A . . LowGQX END=34015953 GT ./. chr1 34023333 . C . . LowGQX END=34023523 GT ./. chr1 34024899 . C . . LowGQX END=34025074 GT ./. chr1 34033191 . A . . LowGQX END=34033442 GT ./. chr1 34034972 . A . . LowGQX END=34035150 GT ./. chr1 34037130 . A . . LowGQX END=34037329 GT ./. chr1 34038104 . A . . LowGQX END=34038294 GT ./. chr1 34042894 . A . . LowGQX END=34043087 GT ./. chr1 34046351 . A . . LowGQX END=34046502 GT ./. chr1 34049240 . A . . LowGQX END=34049433 GT ./. chr1 34052102 . A . . LowGQX END=34052220 GT ./. chr1 34052679 . A . . LowGQX END=34052779 GT ./. chr1 34057965 . A . . LowGQX END=34058125 GT ./. chr1 34065713 . T . . LowGQX END=34065842 GT ./. chr1 34066463 . A . . LowGQX END=34066613 GT ./. chr1 34067897 . T . . LowGQX END=34068149 GT ./. chr1 34070880 . A . . LowGQX END=34071073 GT ./. chr1 34071421 . G . . LowGQX END=34071591 GT ./. chr1 34076639 . A . . LowGQX END=34076853 GT ./. chr1 34080052 . C . . LowGQX END=34080223 GT ./. chr1 34082491 . T . . LowGQX END=34082591 GT ./. chr1 34083097 . A . . LowGQX END=34083220 GT ./. chr1 34087765 . A . . LowGQX END=34087874 GT ./. chr1 34088968 . A . . LowGQX END=34089069 GT ./. chr1 34090117 . A . . LowGQX END=34090246 GT ./. chr1 34090649 . A . . LowGQX END=34090857 GT ./. chr1 34092084 . A . . LowGQX END=34092184 GT ./. chr1 34099020 . A . . LowGQX END=34099138 GT ./. chr1 34100812 . A . . LowGQX END=34100933 GT ./. chr1 34101958 . A . . LowGQX END=34102157 GT ./. chr1 34112246 . A . . LowGQX END=34112438 GT ./. chr1 34117921 . A . . LowGQX END=34118064 GT ./. chr1 34123544 . A . . LowGQX END=34123740 GT ./. chr1 34128488 . A . . LowGQX END=34128695 GT ./. chr1 34158478 . A . . LowGQX END=34158659 GT ./. chr1 34164351 . A . . LowGQX END=34164547 GT ./. chr1 34166115 . A . . LowGQX END=34166276 GT ./. chr1 34174687 . A . . LowGQX END=34174884 GT ./. chr1 34180185 . A . . LowGQX END=34180378 GT ./. chr1 34181884 . A . . LowGQX END=34182104 GT ./. chr1 34189795 . A . . LowGQX END=34189916 GT ./. chr1 34190115 . A . . LowGQX END=34190308 GT ./. chr1 34190948 . A . . LowGQX END=34191140 GT ./. chr1 34192146 . A . . LowGQX END=34192289 GT ./. chr1 34204729 . G . . LowGQX END=34204938 GT ./. chr1 34208879 . A . . LowGQX END=34209210 GT ./. chr1 34238161 . C . . LowGQX END=34238355 GT ./. chr1 34254199 . A . . LowGQX END=34254316 GT ./. chr1 34258022 . A . . LowGQX END=34258130 GT ./. chr1 34270315 . A . . LowGQX END=34270500 GT ./. chr1 34276301 . A . . LowGQX END=34276512 GT ./. chr1 34285312 . A . . LowGQX END=34285441 GT ./. chr1 34286064 . T . . LowGQX END=34286164 GT ./. chr1 34291236 . G . . LowGQX END=34291387 GT ./. chr1 34312483 . A . . LowGQX END=34312643 GT ./. chr1 34329791 . A . . LowGQX END=34330356 GT ./. chr1 34383693 . A . . LowGQX END=34383905 GT ./. chr1 34401359 . A . . LowGQX END=34401558 GT ./. chr1 34498193 . A . . LowGQX END=34498353 GT ./. chr1 34554576 . A . . LowGQX END=34554797 GT ./. chr1 34630500 . G . . LowGQX END=34630699 GT ./. chr1 34631332 . A . . LowGQX END=34631432 GT ./. chr1 34643390 . A . . LowGQX END=34643711 GT ./. chr1 34662825 . G . . LowGQX END=34663517 GT ./. chr1 34666371 . A . . LowGQX END=34666636 GT ./. chr1 34667683 . A . . LowGQX END=34667863 GT ./. chr1 34673747 . T . . LowGQX END=34673847 GT ./. chr1 34677809 . A . . LowGQX END=34678010 GT ./. chr1 34684275 . C . . LowGQX END=34684375 GT ./. chr1 35183954 . G . . LowGQX END=35184054 GT ./. chr1 35222930 . C . . LowGQX END=35223756 GT ./. chr1 35226805 . G . . LowGQX END=35227708 GT ./. chr1 35250313 . G . . LowGQX END=35251228 GT ./. chr1 35258195 . A . . LowGQX END=35258406 GT ./. chr1 35259798 . A . . LowGQX END=35260819 GT ./. chr1 35320716 . T . . LowGQX END=35321284 GT ./. chr1 35321299 . A . . LowGQX END=35321579 GT ./. chr1 35331439 . T . . LowGQX END=35331954 GT ./. chr1 35332598 . G . . LowGQX END=35332844 GT ./. chr1 35333086 . C . . LowGQX END=35333280 GT ./. chr1 35334155 . C . . LowGQX END=35334742 GT ./. chr1 35350528 . T . . LowGQX END=35350716 GT ./. chr1 35351028 . G . . LowGQX END=35351444 GT ./. chr1 35351622 . C . . LowGQX END=35351938 GT ./. chr1 35365216 . G . . LowGQX END=35365394 GT ./. chr1 35365618 . G . . LowGQX END=35365926 GT ./. chr1 35369827 . A . . LowGQX END=35371036 GT ./. chr1 35441973 . T . . LowGQX END=35442948 GT ./. chr1 35447544 . T . . LowGQX END=35447721 GT ./. chr1 35449367 . C . . LowGQX END=35449549 GT ./. chr1 35450743 . G . . LowGQX END=35450907 GT ./. chr1 35452703 . T . . LowGQX END=35454622 GT ./. chr1 35455838 . T . . LowGQX END=35455938 GT ./. chr1 35457688 . A . . LowGQX END=35457998 GT ./. chr1 35469487 . T . . LowGQX END=35469638 GT ./. chr1 35470731 . A . . LowGQX END=35470876 GT ./. chr1 35472550 . A . . LowGQX END=35472702 GT ./. chr1 35474351 . A . . LowGQX END=35474528 GT ./. chr1 35476046 . A . . LowGQX END=35476201 GT ./. chr1 35476357 . A . . LowGQX END=35476659 GT ./. chr1 35477489 . A . . LowGQX END=35477609 GT ./. chr1 35478030 . A . . LowGQX END=35478219 GT ./. chr1 35480296 . A . . LowGQX END=35480492 GT ./. chr1 35480567 . A . . LowGQX END=35480766 GT ./. chr1 35484868 . T . . LowGQX END=35485206 GT ./. chr1 35485977 . T . . LowGQX END=35486077 GT ./. chr1 35496145 . T . . LowGQX END=35496296 GT ./. chr1 35559587 . A . . LowGQX END=35559687 GT ./. chr1 35561348 . C . . LowGQX END=35561507 GT ./. chr1 35562916 . A . . LowGQX END=35563265 GT ./. chr1 35569894 . A . . LowGQX END=35570073 GT ./. chr1 35570156 . A . . LowGQX END=35570373 GT ./. chr1 35575893 . A . . LowGQX END=35576051 GT ./. chr1 35577371 . A . . LowGQX END=35577516 GT ./. chr1 35577660 . A . . LowGQX END=35577760 GT ./. chr1 35578576 . A . . LowGQX END=35580863 GT ./. chr1 35643578 . A . . LowGQX END=35643678 GT ./. chr1 35650015 . A . . LowGQX END=35650197 GT ./. chr1 35652600 . A . . LowGQX END=35652726 GT ./. chr1 35652779 . T . . LowGQX END=35652879 GT ./. chr1 35653572 . A . . LowGQX END=35653694 GT ./. chr1 35654597 . A . . LowGQX END=35654697 GT ./. chr1 35654785 . A . . LowGQX END=35654986 GT ./. chr1 35656097 . A . . LowGQX END=35656197 GT ./. chr1 35656293 . A . . LowGQX END=35656599 GT ./. chr1 35656930 . A . . LowGQX END=35657133 GT ./. chr1 35657810 . C . . LowGQX END=35658653 GT ./. chr1 35734558 . C . . LowGQX END=35734718 GT ./. chr1 35790934 . T . . LowGQX END=35791034 GT ./. chr1 35824524 . A . . LowGQX END=35825050 GT ./. chr1 35826776 . T . . LowGQX END=35826876 GT ./. chr1 35827198 . A . . LowGQX END=35827393 GT ./. chr1 35835623 . T . . LowGQX END=35835723 GT ./. chr1 35835971 . A . . LowGQX END=35836231 GT ./. chr1 35846858 . A . . LowGQX END=35847037 GT ./. chr1 35847145 . A . . LowGQX END=35847362 GT ./. chr1 35851011 . T . . LowGQX END=35851196 GT ./. chr1 35851673 . A . . LowGQX END=35851793 GT ./. chr1 35852602 . A . . LowGQX END=35852882 GT ./. chr1 35853053 . A . . LowGQX END=35853208 GT ./. chr1 35854489 . T . . LowGQX END=35854686 GT ./. chr1 35855547 . A . . LowGQX END=35855702 GT ./. chr1 35857771 . T . . LowGQX END=35857956 GT ./. chr1 35858166 . T . . LowGQX END=35858317 GT ./. chr1 35859194 . A . . LowGQX END=35859343 GT ./. chr1 35862151 . A . . LowGQX END=35862274 GT ./. chr1 35862976 . A . . LowGQX END=35863149 GT ./. chr1 35863991 . T . . LowGQX END=35864091 GT ./. chr1 35864463 . A . . LowGQX END=35864647 GT ./. chr1 35865081 . A . . LowGQX END=35865181 GT ./. chr1 35870622 . A . . LowGQX END=35870798 GT ./. chr1 35870972 . A . . LowGQX END=35871072 GT ./. chr1 35873607 . A . . LowGQX END=35873763 GT ./. chr1 35879571 . A . . LowGQX END=35879731 GT ./. chr1 35881065 . A . . LowGQX END=35881318 GT ./. chr1 35884042 . A . . LowGQX END=35884222 GT ./. chr1 35885069 . A . . LowGQX END=35885281 GT ./. chr1 35900493 . G . . LowGQX END=35900685 GT ./. chr1 35906617 . A . . LowGQX END=35906742 GT ./. chr1 35907843 . T . . LowGQX END=35907943 GT ./. chr1 35908505 . A . . LowGQX END=35908632 GT ./. chr1 35909760 . A . . LowGQX END=35909907 GT ./. chr1 35913772 . A . . LowGQX END=35913936 GT ./. chr1 35915466 . A . . LowGQX END=35915609 GT ./. chr1 35915957 . A . . LowGQX END=35916113 GT ./. chr1 35917227 . A . . LowGQX END=35917393 GT ./. chr1 35919156 . A . . LowGQX END=35919293 GT ./. chr1 35919961 . A . . LowGQX END=35920089 GT ./. chr1 35921612 . A . . LowGQX END=35921845 GT ./. chr1 35925904 . A . . LowGQX END=35926041 GT ./. chr1 35928219 . C . . LowGQX END=35928319 GT ./. chr1 35932203 . A . . LowGQX END=35932303 GT ./. chr1 35936462 . A . . LowGQX END=35936564 GT ./. chr1 35940404 . A . . LowGQX END=35940564 GT ./. chr1 35944565 . A . . LowGQX END=35944816 GT ./. chr1 35972211 . A . . LowGQX END=35972739 GT ./. chr1 36019949 . A . . LowGQX END=36020116 GT ./. chr1 36023260 . A . . LowGQX END=36023519 GT ./. chr1 36023759 . T . . LowGQX END=36023859 GT ./. chr1 36024706 . A . . LowGQX END=36024851 GT ./. chr1 36025925 . A . . LowGQX END=36026898 GT ./. chr1 36027991 . A . . LowGQX END=36028237 GT ./. chr1 36028801 . A . . LowGQX END=36029030 GT ./. chr1 36029366 . A . . LowGQX END=36029513 GT ./. chr1 36030799 . C . . LowGQX END=36031333 GT ./. chr1 36032396 . T . . LowGQX END=36032496 GT ./. chr1 36039143 . C . . LowGQX END=36039243 GT ./. chr1 36039526 . A . . LowGQX END=36040015 GT ./. chr1 36040526 . A . . LowGQX END=36040626 GT ./. chr1 36042938 . T . . LowGQX END=36043094 GT ./. chr1 36053929 . A . . LowGQX END=36054156 GT ./. chr1 36055529 . A . . LowGQX END=36055652 GT ./. chr1 36056233 . A . . LowGQX END=36056379 GT ./. chr1 36059983 . T . . LowGQX END=36060283 GT ./. chr1 36068866 . T . . LowGQX END=36068978 GT ./. chr1 36070809 . T . . LowGQX END=36070962 GT ./. chr1 36074845 . A . . LowGQX END=36075012 GT ./. chr1 36096861 . G . . LowGQX END=36096961 GT ./. chr1 36101909 . A . . LowGQX END=36102036 GT ./. chr1 36106939 . T . . LowGQX END=36107039 GT ./. chr1 36181231 . C . . LowGQX END=36181925 GT ./. chr1 36186487 . C . . LowGQX END=36186587 GT ./. chr1 36202095 . T . . LowGQX END=36202210 GT ./. chr1 36202513 . A . . LowGQX END=36202679 GT ./. chr1 36202932 . C . . LowGQX END=36203032 GT ./. chr1 36203591 . A . . LowGQX END=36203701 GT ./. chr1 36204054 . A . . LowGQX END=36204186 GT ./. chr1 36204735 . A . . LowGQX END=36204861 GT ./. chr1 36204964 . A . . LowGQX END=36205133 GT ./. chr1 36208740 . A . . LowGQX END=36208845 GT ./. chr1 36209044 . C . . LowGQX END=36209144 GT ./. chr1 36211050 . A . . LowGQX END=36211166 GT ./. chr1 36212365 . A . . LowGQX END=36212596 GT ./. chr1 36213506 . A . . LowGQX END=36213665 GT ./. chr1 36214004 . A . . LowGQX END=36214208 GT ./. chr1 36214381 . T . . LowGQX END=36214481 GT ./. chr1 36215051 . C . . LowGQX END=36215151 GT ./. chr1 36215232 . A . . LowGQX END=36215415 GT ./. chr1 36216849 . A . . LowGQX END=36217110 GT ./. chr1 36219334 . G . . LowGQX END=36219540 GT ./. chr1 36225941 . A . . LowGQX END=36226520 GT ./. chr1 36226695 . A . . LowGQX END=36226808 GT ./. chr1 36227586 . T . . LowGQX END=36227686 GT ./. chr1 36227994 . C . . LowGQX END=36228094 GT ./. chr1 36228759 . G . . LowGQX END=36228949 GT ./. chr1 36229865 . A . . LowGQX END=36230318 GT ./. chr1 36230817 . A . . LowGQX END=36230930 GT ./. chr1 36235410 . C . . LowGQX END=36235510 GT ./. chr1 36273917 . A . . LowGQX END=36274077 GT ./. chr1 36282481 . A . . LowGQX END=36282651 GT ./. chr1 36288461 . A . . LowGQX END=36288586 GT ./. chr1 36290912 . A . . LowGQX END=36291098 GT ./. chr1 36291278 . A . . LowGQX END=36291419 GT ./. chr1 36291525 . A . . LowGQX END=36291664 GT ./. chr1 36292283 . T . . LowGQX END=36292443 GT ./. chr1 36297026 . A . . LowGQX END=36297178 GT ./. chr1 36297411 . A . . LowGQX END=36297535 GT ./. chr1 36297656 . A . . LowGQX END=36297789 GT ./. chr1 36298036 . A . . LowGQX END=36298174 GT ./. chr1 36299589 . A . . LowGQX END=36299789 GT ./. chr1 36301433 . A . . LowGQX END=36301597 GT ./. chr1 36306764 . A . . LowGQX END=36307084 GT ./. chr1 36307215 . A . . LowGQX END=36307354 GT ./. chr1 36315756 . A . . LowGQX END=36315915 GT ./. chr1 36316453 . A . . LowGQX END=36316657 GT ./. chr1 36319096 . A . . LowGQX END=36319209 GT ./. chr1 36348926 . G . . LowGQX END=36349086 GT ./. chr1 36354026 . A . . LowGQX END=36354214 GT ./. chr1 36358156 . A . . LowGQX END=36358281 GT ./. chr1 36358696 . A . . LowGQX END=36358882 GT ./. chr1 36359273 . A . . LowGQX END=36359414 GT ./. chr1 36359596 . A . . LowGQX END=36359775 GT ./. chr1 36359910 . T . . LowGQX END=36360010 GT ./. chr1 36360721 . A . . LowGQX END=36360873 GT ./. chr1 36367073 . A . . LowGQX END=36367197 GT ./. chr1 36367497 . G . . LowGQX END=36367674 GT ./. chr1 36367803 . A . . LowGQX END=36367941 GT ./. chr1 36372534 . A . . LowGQX END=36372723 GT ./. chr1 36379441 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 36379442 . G . . LowGQX . GT ./. chr1 36379443 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 36379444 . T . . LowGQX END=36379447 GT ./. chr1 36379448 . G . . LowGQX END=36379451;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 36379452 . A . . LowGQX . GT ./. chr1 36379453 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 36379454 . C . . LowGQX END=36379456 GT ./. chr1 36379457 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 36379458 . T . . LowGQX . GT ./. chr1 36379459 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 36379460 . G . . LowGQX . GT ./. chr1 36379461 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 36379462 . A . . LowGQX . GT ./. chr1 36379463 . G . . LowGQX END=36379466;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 36379467 . C . . LowGQX . GT ./. chr1 36379468 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 36379469 . C . . LowGQX END=36379470 GT ./. chr1 36379471 . C . . LowGQX END=36379473;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 36379474 . G . . LowGQX END=36379605 GT ./. chr1 36379781 . T . . LowGQX END=36379881 GT ./. chr1 36380947 . A . . LowGQX END=36381146 GT ./. chr1 36383192 . A . . LowGQX END=36383331 GT ./. chr1 36383921 . A . . LowGQX END=36384027 GT ./. chr1 36384654 . A . . LowGQX END=36384858 GT ./. chr1 36385098 . A . . LowGQX END=36385211 GT ./. chr1 36396988 . G . . LowGQX END=36397088 GT ./. chr1 36411291 . A . . LowGQX END=36411467 GT ./. chr1 36432554 . A . . LowGQX END=36432679 GT ./. chr1 36437623 . A . . LowGQX END=36437836 GT ./. chr1 36438974 . A . . LowGQX END=36439115 GT ./. chr1 36448188 . G . . LowGQX END=36448288 GT ./. chr1 36469900 . T . . LowGQX END=36470079 GT ./. chr1 36474285 . G . . LowGQX END=36474385 GT ./. chr1 36474456 . A . . LowGQX END=36474648 GT ./. chr1 36475074 . A . . LowGQX END=36475244 GT ./. chr1 36479229 . A . . LowGQX END=36479356 GT ./. chr1 36479514 . A . . LowGQX END=36479652 GT ./. chr1 36492713 . A . . LowGQX END=36492902 GT ./. chr1 36499773 . A . . LowGQX END=36499937 GT ./. chr1 36501774 . T . . LowGQX END=36501874 GT ./. chr1 36505389 . A . . LowGQX END=36505588 GT ./. chr1 36505906 . A . . LowGQX END=36506045 GT ./. chr1 36509046 . A . . LowGQX END=36509152 GT ./. chr1 36520545 . A . . LowGQX END=36520749 GT ./. chr1 36521236 . A . . LowGQX END=36521349 GT ./. chr1 36550472 . T . . LowGQX END=36550941 GT ./. chr1 36551277 . C . . LowGQX END=36551377 GT ./. chr1 36551386 . G . . LowGQX END=36551694 GT ./. chr1 36552254 . C . . LowGQX END=36552698 GT ./. chr1 36552754 . C . . LowGQX END=36552964 GT ./. chr1 36552989 . G . . LowGQX END=36553235 GT ./. chr1 36553278 . A . . LowGQX END=36553460 GT ./. chr1 36553523 . C . . LowGQX END=36553839 GT ./. chr1 36554433 . C . . LowGQX END=36554783 GT ./. chr1 36556843 . A . . LowGQX END=36556944 GT ./. chr1 36557217 . A . . LowGQX END=36557429 GT ./. chr1 36557509 . A . . LowGQX END=36557698 GT ./. chr1 36558021 . A . . LowGQX END=36558126 GT ./. chr1 36558696 . A . . LowGQX END=36558990 GT ./. chr1 36563119 . G . . LowGQX END=36565140 GT ./. chr1 36565600 . A . . LowGQX END=36565895 GT ./. chr1 36602802 . G . . LowGQX END=36602926 GT ./. chr1 36603395 . A . . LowGQX END=36603582 GT ./. chr1 36603716 . C . . LowGQX END=36603834 GT ./. chr1 36605319 . A . . LowGQX END=36605423 GT ./. chr1 36605618 . C . . LowGQX END=36605770 GT ./. chr1 36614909 . G . . LowGQX END=36615009 GT ./. chr1 36621932 . G . . LowGQX END=36622092 GT ./. chr1 36636570 . A . . LowGQX END=36636919 GT ./. chr1 36637099 . G . . LowGQX END=36637199 GT ./. chr1 36638063 . A . . LowGQX END=36638231 GT ./. chr1 36638963 . A . . LowGQX END=36639082 GT ./. chr1 36640497 . A . . LowGQX END=36640612 GT ./. chr1 36641728 . T . . LowGQX END=36642248 GT ./. chr1 36642296 . A . . LowGQX END=36642446 GT ./. chr1 36643117 . T . . LowGQX END=36643217 GT ./. chr1 36643472 . A . . LowGQX END=36643805 GT ./. chr1 36644018 . A . . LowGQX END=36644200 GT ./. chr1 36644284 . A . . LowGQX END=36644456 GT ./. chr1 36644469 . C . . LowGQX END=36644629 GT ./. chr1 36644840 . A . . LowGQX END=36644940 GT ./. chr1 36645086 . G . . LowGQX END=36645186 GT ./. chr1 36645263 . A . . LowGQX END=36645415 GT ./. chr1 36645473 . A . . LowGQX END=36645671 GT ./. chr1 36645805 . G . . LowGQX END=36645905 GT ./. chr1 36748163 . A . . LowGQX END=36748304 GT ./. chr1 36751967 . A . . LowGQX END=36752874 GT ./. chr1 36754659 . A . . LowGQX END=36755368 GT ./. chr1 36756973 . A . . LowGQX END=36757150 GT ./. chr1 36758197 . A . . LowGQX END=36758313 GT ./. chr1 36759445 . A . . LowGQX END=36759545 GT ./. chr1 36762182 . A . . LowGQX END=36762374 GT ./. chr1 36766485 . A . . LowGQX END=36766688 GT ./. chr1 36767102 . T . . LowGQX END=36767300 GT ./. chr1 36769365 . C . . LowGQX END=36769621 GT ./. chr1 36771974 . T . . LowGQX END=36772074 GT ./. chr1 36772177 . C . . LowGQX END=36772357 GT ./. chr1 36772365 . G . . LowGQX END=36772525 GT ./. chr1 36772767 . G . . LowGQX END=36772887 GT ./. chr1 36773113 . C . . LowGQX END=36773213 GT ./. chr1 36773349 . T . . LowGQX END=36773449 GT ./. chr1 36773492 . G . . LowGQX END=36773592 GT ./. chr1 36773709 . G . . LowGQX END=36773811 GT ./. chr1 36773983 . T . . LowGQX END=36774083 GT ./. chr1 36775120 . T . . LowGQX END=36775220 GT ./. chr1 36784669 . C . . LowGQX END=36784769 GT ./. chr1 36784837 . G . . LowGQX END=36784937 GT ./. chr1 36785040 . T . . LowGQX END=36785140 GT ./. chr1 36785275 . G . . LowGQX END=36786402 GT ./. chr1 36786498 . C . . LowGQX END=36786598 GT ./. chr1 36786643 . T . . LowGQX END=36786743 GT ./. chr1 36787894 . C . . LowGQX END=36788334 GT ./. chr1 36788496 . A . . LowGQX END=36788710 GT ./. chr1 36793434 . A . . LowGQX END=36793759 GT ./. chr1 36807354 . T . . LowGQX END=36807577 GT ./. chr1 36808799 . C . . LowGQX END=36809052 GT ./. chr1 36809459 . A . . LowGQX END=36809629 GT ./. chr1 36809719 . A . . LowGQX END=36809868 GT ./. chr1 36814299 . A . . LowGQX END=36814419 GT ./. chr1 36819942 . G . . LowGQX END=36820042 GT ./. chr1 36820805 . A . . LowGQX END=36821037 GT ./. chr1 36823838 . A . . LowGQX END=36823986 GT ./. chr1 36824336 . A . . LowGQX END=36824439 GT ./. chr1 36826820 . A . . LowGQX END=36826936 GT ./. chr1 36859357 . C . . LowGQX END=36859733 GT ./. chr1 36881625 . G . . LowGQX END=36881725 GT ./. chr1 36883738 . A . . LowGQX END=36883859 GT ./. chr1 36884574 . G . . LowGQX END=36884674 GT ./. chr1 36886075 . A . . LowGQX END=36886219 GT ./. chr1 36887736 . A . . LowGQX END=36887836 GT ./. chr1 36888367 . A . . LowGQX END=36888500 GT ./. chr1 36888906 . C . . LowGQX END=36889070 GT ./. chr1 36893919 . T . . LowGQX END=36894079 GT ./. chr1 36897394 . T . . LowGQX END=36897494 GT ./. chr1 36898021 . A . . LowGQX END=36898241 GT ./. chr1 36904355 . A . . LowGQX END=36904514 GT ./. chr1 36909570 . G . . LowGQX END=36909670 GT ./. chr1 36913435 . G . . LowGQX END=36913535 GT ./. chr1 36915857 . A . . LowGQX END=36915973 GT ./. chr1 36921387 . A . . LowGQX END=36921529 GT ./. chr1 36921786 . A . . LowGQX END=36921982 GT ./. chr1 36923504 . G . . LowGQX END=36923604 GT ./. chr1 36926286 . G . . LowGQX END=36926386 GT ./. chr1 36926840 . C . . LowGQX END=36926940 GT ./. chr1 36927677 . C . . LowGQX END=36927777 GT ./. chr1 36929380 . C . . LowGQX END=36929480 GT ./. chr1 36929745 . A . . LowGQX END=36929879 GT ./. chr1 36931646 . C . . LowGQX END=36931853 GT ./. chr1 36931907 . G . . LowGQX END=36932561 GT ./. chr1 36932780 . A . . LowGQX END=36932964 GT ./. chr1 36933108 . G . . LowGQX END=36933304 GT ./. chr1 36933372 . G . . LowGQX END=36933615 GT ./. chr1 36933625 . C . . LowGQX END=36933874 GT ./. chr1 36934706 . C . . LowGQX END=36934910 GT ./. chr1 36935202 . C . . LowGQX END=36935493 GT ./. chr1 36936983 . T . . LowGQX END=36937299 GT ./. chr1 36937616 . T . . LowGQX END=36938044 GT ./. chr1 36938067 . C . . LowGQX END=36938339 GT ./. chr1 36938985 . T . . LowGQX END=36939275 GT ./. chr1 36939314 . C . . LowGQX END=36939540 GT ./. chr1 36940927 . T . . LowGQX END=36941326 GT ./. chr1 36944983 . C . . LowGQX END=36945149 GT ./. chr1 37267450 . G . . LowGQX END=37267649 GT ./. chr1 37270533 . A . . LowGQX END=37270841 GT ./. chr1 37271703 . A . . LowGQX END=37271930 GT ./. chr1 37282659 . A . . LowGQX END=37282881 GT ./. chr1 37285335 . A . . LowGQX END=37285458 GT ./. chr1 37291202 . A . . LowGQX END=37291430 GT ./. chr1 37307335 . A . . LowGQX END=37307543 GT ./. chr1 37315910 . A . . LowGQX END=37316028 GT ./. chr1 37319214 . A . . LowGQX END=37319326 GT ./. chr1 37324707 . A . . LowGQX END=37324855 GT ./. chr1 37325432 . C . . LowGQX END=37325621 GT ./. chr1 37335326 . G . . LowGQX END=37335426 GT ./. chr1 37337787 . A . . LowGQX END=37337973 GT ./. chr1 37346233 . A . . LowGQX END=37346495 GT ./. chr1 37356519 . A . . LowGQX END=37356700 GT ./. chr1 37499543 . T . . LowGQX END=37499712 GT ./. chr1 37941096 . C . . LowGQX END=37941332 GT ./. chr1 37941333 . A . . LowGQX END=37941543;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 37945889 . A . . LowGQX END=37946033 GT ./. chr1 37947200 . A . . LowGQX END=37947439 GT ./. chr1 37948033 . A . . LowGQX END=37949215 GT ./. chr1 37959289 . T . . LowGQX END=37959443 GT ./. chr1 37959655 . G . . LowGQX END=37959755 GT ./. chr1 37961453 . C . . LowGQX END=37961553 GT ./. chr1 37962149 . T . . LowGQX END=37962249 GT ./. chr1 37962273 . A . . LowGQX END=37962373 GT ./. chr1 37967403 . A . . LowGQX END=37967600 GT ./. chr1 37974852 . A . . LowGQX END=37974952 GT ./. chr1 37975050 . A . . LowGQX END=37975150 GT ./. chr1 37979022 . A . . LowGQX END=37979164 GT ./. chr1 37980193 . T . . LowGQX END=37980353 GT ./. chr1 38003347 . T . . LowGQX END=38003616 GT ./. chr1 38005756 . A . . LowGQX END=38006359 GT ./. chr1 38018244 . A . . LowGQX END=38018351 GT ./. chr1 38019575 . C . . LowGQX END=38019833 GT ./. chr1 38022528 . C . . LowGQX END=38022679 GT ./. chr1 38023202 . A . . LowGQX END=38023382 GT ./. chr1 38024926 . A . . LowGQX END=38025100 GT ./. chr1 38027156 . A . . LowGQX END=38027339 GT ./. chr1 38027680 . A . . LowGQX END=38027849 GT ./. chr1 38030595 . A . . LowGQX END=38030695 GT ./. chr1 38032454 . C . . LowGQX END=38032611 GT ./. chr1 38033270 . T . . LowGQX END=38033370 GT ./. chr1 38033868 . A . . LowGQX END=38033968 GT ./. chr1 38034450 . A . . LowGQX END=38034906 GT ./. chr1 38039942 . A . . LowGQX END=38040060 GT ./. chr1 38040264 . A . . LowGQX END=38040427 GT ./. chr1 38041194 . A . . LowGQX END=38041354 GT ./. chr1 38042027 . A . . LowGQX END=38042160 GT ./. chr1 38046943 . A . . LowGQX END=38047147 GT ./. chr1 38047822 . A . . LowGQX END=38047940 GT ./. chr1 38048377 . A . . LowGQX END=38048540 GT ./. chr1 38049452 . A . . LowGQX END=38049552 GT ./. chr1 38052910 . A . . LowGQX END=38053099 GT ./. chr1 38056264 . T . . LowGQX END=38056449 GT ./. chr1 38058311 . A . . LowGQX END=38058411 GT ./. chr1 38059356 . T . . LowGQX END=38059456 GT ./. chr1 38061342 . C . . LowGQX END=38061388 GT ./. chr1 38061389 . A . . LowGQX END=38061442;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 38078376 . C . . LowGQX END=38078645 GT ./. chr1 38079325 . C . . LowGQX END=38079616 GT ./. chr1 38079805 . C . . LowGQX END=38080057 GT ./. chr1 38082105 . A . . LowGQX END=38082399 GT ./. chr1 38095189 . C . . LowGQX END=38095385 GT ./. chr1 38095527 . G . . LowGQX END=38095627 GT ./. chr1 38148764 . T . . LowGQX END=38148864 GT ./. chr1 38148989 . A . . LowGQX END=38149112 GT ./. chr1 38151943 . A . . LowGQX END=38152127 GT ./. chr1 38155276 . A . . LowGQX END=38155559 GT ./. chr1 38155888 . C . . LowGQX END=38156088 GT ./. chr1 38158360 . G . . LowGQX END=38158460 GT ./. chr1 38158575 . A . . LowGQX END=38158708 GT ./. chr1 38161553 . T . . LowGQX END=38161653 GT ./. chr1 38164564 . A . . LowGQX END=38164664 GT ./. chr1 38166101 . C . . LowGQX END=38166201 GT ./. chr1 38167409 . T . . LowGQX END=38167509 GT ./. chr1 38168922 . A . . LowGQX END=38169022 GT ./. chr1 38171111 . A . . LowGQX END=38171242 GT ./. chr1 38172644 . A . . LowGQX END=38172744 GT ./. chr1 38173967 . C . . LowGQX END=38174067 GT ./. chr1 38181543 . C . . LowGQX END=38181670 GT ./. chr1 38184042 . A . . LowGQX END=38184205 GT ./. chr1 38184301 . C . . LowGQX END=38184491 GT ./. chr1 38185084 . A . . LowGQX END=38185282 GT ./. chr1 38185558 . A . . LowGQX END=38185733 GT ./. chr1 38186021 . A . . LowGQX END=38186229 GT ./. chr1 38186436 . C . . LowGQX END=38186536 GT ./. chr1 38187330 . A . . LowGQX END=38187520 GT ./. chr1 38187907 . C . . LowGQX END=38188007 GT ./. chr1 38188477 . C . . LowGQX END=38188604 GT ./. chr1 38188661 . G . . LowGQX END=38188841 GT ./. chr1 38188964 . C . . LowGQX END=38189064 GT ./. chr1 38192772 . A . . LowGQX END=38192885 GT ./. chr1 38197081 . A . . LowGQX END=38197257 GT ./. chr1 38200240 . T . . LowGQX END=38200400 GT ./. chr1 38200896 . C . . LowGQX END=38201065 GT ./. chr1 38218535 . C . . LowGQX END=38218905 GT ./. chr1 38219864 . T . . LowGQX END=38220075 GT ./. chr1 38227037 . C . . LowGQX END=38227758 GT ./. chr1 38228440 . G . . LowGQX END=38228540 GT ./. chr1 38230631 . A . . LowGQX END=38230741 GT ./. chr1 38259843 . G . . LowGQX END=38260405 GT ./. chr1 38261408 . G . . LowGQX END=38261521 GT ./. chr1 38262404 . T . . LowGQX END=38262504 GT ./. chr1 38265237 . A . . LowGQX END=38265878 GT ./. chr1 38269584 . G . . LowGQX END=38269684 GT ./. chr1 38269972 . A . . LowGQX END=38270119 GT ./. chr1 38272527 . A . . LowGQX END=38272651 GT ./. chr1 38272771 . A . . LowGQX END=38272890 GT ./. chr1 38273451 . G . . LowGQX END=38273861 GT ./. chr1 38274065 . G . . LowGQX END=38274415 GT ./. chr1 38274648 . A . . LowGQX END=38274891 GT ./. chr1 38280806 . C . . LowGQX END=38281241 GT ./. chr1 38283073 . T . . LowGQX END=38283173 GT ./. chr1 38287791 . A . . LowGQX END=38288391 GT ./. chr1 38289380 . A . . LowGQX END=38289487 GT ./. chr1 38292197 . G . . LowGQX END=38292297 GT ./. chr1 38293840 . A . . LowGQX END=38293940 GT ./. chr1 38297906 . G . . LowGQX END=38298006 GT ./. chr1 38300294 . G . . LowGQX END=38300394 GT ./. chr1 38300749 . A . . LowGQX END=38300890 GT ./. chr1 38301330 . G . . LowGQX END=38301430 GT ./. chr1 38304295 . A . . LowGQX END=38304431 GT ./. chr1 38305590 . A . . LowGQX END=38305835 GT ./. chr1 38306117 . A . . LowGQX END=38306217 GT ./. chr1 38322921 . A . . LowGQX END=38323333 GT ./. chr1 38327985 . G . . LowGQX END=38328105 GT ./. chr1 38329982 . A . . LowGQX END=38330098 GT ./. chr1 38331431 . A . . LowGQX END=38331563 GT ./. chr1 38332124 . A . . LowGQX END=38332224 GT ./. chr1 38334171 . A . . LowGQX END=38334289 GT ./. chr1 38338600 . A . . LowGQX END=38338840 GT ./. chr1 38339663 . A . . LowGQX END=38339830 GT ./. chr1 38341276 . A . . LowGQX END=38341391 GT ./. chr1 38343858 . A . . LowGQX END=38343998 GT ./. chr1 38345755 . A . . LowGQX END=38345869 GT ./. chr1 38348477 . A . . LowGQX END=38348593 GT ./. chr1 38351308 . A . . LowGQX END=38351500 GT ./. chr1 38352558 . A . . LowGQX END=38352679 GT ./. chr1 38353021 . A . . LowGQX END=38353140 GT ./. chr1 38353913 . A . . LowGQX END=38354019 GT ./. chr1 38355227 . A . . LowGQX END=38355399 GT ./. chr1 38357028 . A . . LowGQX END=38357129 GT ./. chr1 38397156 . G . . LowGQX END=38397728 GT ./. chr1 38406358 . A . . LowGQX END=38406473 GT ./. chr1 38409277 . C . . LowGQX END=38409377 GT ./. chr1 38409466 . A . . LowGQX END=38409568 GT ./. chr1 38411426 . A . . LowGQX END=38411526 GT ./. chr1 38411903 . C . . LowGQX END=38412003 GT ./. chr1 38423847 . A . . LowGQX END=38423947 GT ./. chr1 38425770 . C . . LowGQX END=38425870 GT ./. chr1 38433712 . T . . LowGQX END=38433812 GT ./. chr1 38435024 . A . . LowGQX END=38435139 GT ./. chr1 38435241 . A . . LowGQX END=38435410 GT ./. chr1 38442541 . C . . LowGQX END=38442641 GT ./. chr1 38444390 . A . . LowGQX END=38444502 GT ./. chr1 38444644 . A . . LowGQX END=38444744 GT ./. chr1 38445122 . C . . LowGQX END=38445222 GT ./. chr1 38446256 . A . . LowGQX END=38446399 GT ./. chr1 38447329 . A . . LowGQX END=38447486 GT ./. chr1 38449837 . T . . LowGQX END=38449937 GT ./. chr1 38450366 . C . . LowGQX END=38450466 GT ./. chr1 38453243 . A . . LowGQX END=38453353 GT ./. chr1 38453433 . G . . LowGQX END=38453533 GT ./. chr1 38455194 . A . . LowGQX END=38455294 GT ./. chr1 38455540 . A . . LowGQX END=38455640 GT ./. chr1 38463075 . G . . LowGQX END=38463234 GT ./. chr1 38463354 . A . . LowGQX END=38463545 GT ./. chr1 38463605 . T . . LowGQX END=38463807 GT ./. chr1 38464644 . A . . LowGQX END=38464823 GT ./. chr1 38464927 . A . . LowGQX END=38465087 GT ./. chr1 38478457 . T . . LowGQX END=38478557 GT ./. chr1 38482012 . T . . LowGQX END=38482112 GT ./. chr1 38483338 . A . . LowGQX END=38483445 GT ./. chr1 38484134 . A . . LowGQX END=38484252 GT ./. chr1 38484728 . T . . LowGQX END=38484828 GT ./. chr1 38484923 . A . . LowGQX END=38485058 GT ./. chr1 38488369 . A . . LowGQX END=38488484 GT ./. chr1 38489209 . T . . LowGQX END=38489220;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 38489221 . A . . LowGQX END=38489309 GT ./. chr1 38511046 . C . . LowGQX END=38512419 GT ./. chr1 38677427 . C . . LowGQX END=38677527 GT ./. chr1 38677770 . C . . LowGQX END=38678112 GT ./. chr1 39305223 . G . . LowGQX END=39305379 GT ./. chr1 39311609 . A . . LowGQX END=39311789 GT ./. chr1 39317285 . A . . LowGQX END=39317464 GT ./. chr1 39317994 . C . . LowGQX END=39318163 GT ./. chr1 39321378 . A . . LowGQX END=39321582 GT ./. chr1 39322549 . A . . LowGQX END=39322757 GT ./. chr1 39325055 . C . . LowGQX END=39325321 GT ./. chr1 39330261 . G . . LowGQX END=39330415 GT ./. chr1 39332500 . A . . LowGQX END=39332729 GT ./. chr1 39333209 . G . . LowGQX END=39333309 GT ./. chr1 39338677 . A . . LowGQX END=39338777 GT ./. chr1 39338861 . G . . LowGQX END=39339021 GT ./. chr1 39339357 . T . . LowGQX END=39339582 GT ./. chr1 39340221 . G . . LowGQX END=39341773 GT ./. chr1 39347072 . T . . LowGQX END=39347172 GT ./. chr1 39352174 . G . . LowGQX END=39352358 GT ./. chr1 39353616 . A . . LowGQX END=39353716 GT ./. chr1 39358817 . A . . LowGQX END=39358917 GT ./. chr1 39361639 . A . . LowGQX END=39361744 GT ./. chr1 39376992 . A . . LowGQX END=39377109 GT ./. chr1 39381229 . C . . LowGQX END=39381385 GT ./. chr1 39384637 . A . . LowGQX END=39385010 GT ./. chr1 39391614 . C . . LowGQX END=39391714 GT ./. chr1 39395066 . C . . LowGQX END=39395182 GT ./. chr1 39456980 . C . . LowGQX END=39457340 GT ./. chr1 39463841 . A . . LowGQX END=39463986 GT ./. chr1 39466642 . A . . LowGQX END=39466781 GT ./. chr1 39468947 . G . . LowGQX END=39469105 GT ./. chr1 39469684 . T . . LowGQX END=39469935 GT ./. chr1 39494346 . C . . LowGQX END=39494664 GT ./. chr1 39500013 . T . . LowGQX END=39500220 GT ./. chr1 39549810 . C . . LowGQX END=39550113 GT ./. chr1 39568374 . G . . LowGQX END=39568723 GT ./. chr1 39571233 . C . . LowGQX END=39571393 GT ./. chr1 39670694 . A . . LowGQX END=39670804 GT ./. chr1 39696835 . C . . LowGQX END=39696935 GT ./. chr1 39715681 . C . . LowGQX END=39715781 GT ./. chr1 39717516 . A . . LowGQX END=39717616 GT ./. chr1 39719959 . T . . LowGQX END=39720059 GT ./. chr1 39723605 . C . . LowGQX END=39723756 GT ./. chr1 39734369 . A . . LowGQX END=39735393 GT ./. chr1 39747878 . A . . LowGQX END=39748051 GT ./. chr1 39748859 . A . . LowGQX END=39748976 GT ./. chr1 39749079 . A . . LowGQX END=39749190 GT ./. chr1 39749736 . A . . LowGQX END=39749860 GT ./. chr1 39750003 . A . . LowGQX END=39750103 GT ./. chr1 39750753 . A . . LowGQX END=39750885 GT ./. chr1 39750966 . C . . LowGQX END=39751066 GT ./. chr1 39751274 . A . . LowGQX END=39751433 GT ./. chr1 39752956 . A . . LowGQX END=39753237 GT ./. chr1 39757580 . A . . LowGQX END=39757713 GT ./. chr1 39758427 . T . . LowGQX END=39758527 GT ./. chr1 39759128 . A . . LowGQX END=39759294 GT ./. chr1 39760716 . A . . LowGQX END=39760825 GT ./. chr1 39761457 . A . . LowGQX END=39761557 GT ./. chr1 39763290 . A . . LowGQX END=39763420 GT ./. chr1 39764282 . T . . LowGQX END=39764382 GT ./. chr1 39764877 . C . . LowGQX END=39764977 GT ./. chr1 39765880 . A . . LowGQX END=39766037 GT ./. chr1 39768594 . A . . LowGQX END=39768753 GT ./. chr1 39775240 . A . . LowGQX END=39775371 GT ./. chr1 39775915 . A . . LowGQX END=39776103 GT ./. chr1 39776501 . A . . LowGQX END=39776675 GT ./. chr1 39781183 . A . . LowGQX END=39781366 GT ./. chr1 39782061 . A . . LowGQX END=39782204 GT ./. chr1 39782874 . A . . LowGQX END=39783082 GT ./. chr1 39784123 . A . . LowGQX END=39784290 GT ./. chr1 39785328 . C . . LowGQX END=39785428 GT ./. chr1 39788278 . A . . LowGQX END=39788390 GT ./. chr1 39788580 . A . . LowGQX END=39788683 GT ./. chr1 39789863 . A . . LowGQX END=39790020 GT ./. chr1 39790313 . T . . LowGQX END=39790413 GT ./. chr1 39792888 . A . . LowGQX END=39793028 GT ./. chr1 39796874 . G . . LowGQX END=39802328 GT ./. chr1 39802852 . A . . LowGQX END=39803006 GT ./. chr1 39806172 . A . . LowGQX END=39806392 GT ./. chr1 39806474 . A . . LowGQX END=39806628 GT ./. chr1 39812577 . T . . LowGQX END=39812947 GT ./. chr1 39815148 . A . . LowGQX END=39815302 GT ./. chr1 39816455 . A . . LowGQX END=39816693 GT ./. chr1 39818677 . A . . LowGQX END=39818906 GT ./. chr1 39823045 . A . . LowGQX END=39823568 GT ./. chr1 39824337 . T . . LowGQX END=39824548 GT ./. chr1 39824811 . A . . LowGQX END=39824939 GT ./. chr1 39826463 . A . . LowGQX END=39826676 GT ./. chr1 39827030 . A . . LowGQX END=39827352 GT ./. chr1 39833818 . A . . LowGQX END=39833989 GT ./. chr1 39835700 . A . . LowGQX END=39835861 GT ./. chr1 39838149 . A . . LowGQX END=39838329 GT ./. chr1 39844115 . C . . LowGQX END=39844215 GT ./. chr1 39844873 . A . . LowGQX END=39845119 GT ./. chr1 39845874 . C . . LowGQX END=39846048 GT ./. chr1 39847623 . A . . LowGQX END=39847827 GT ./. chr1 39851104 . A . . LowGQX END=39851604 GT ./. chr1 39852857 . A . . LowGQX END=39854333 GT ./. chr1 39875937 . G . . LowGQX END=39880222 GT ./. chr1 39888044 . A . . LowGQX END=39888210 GT ./. chr1 39888400 . A . . LowGQX END=39888575 GT ./. chr1 39889698 . A . . LowGQX END=39889869 GT ./. chr1 39893125 . A . . LowGQX END=39893289 GT ./. chr1 39893631 . A . . LowGQX END=39893962 GT ./. chr1 39894907 . C . . LowGQX END=39895007 GT ./. chr1 39895497 . A . . LowGQX END=39895743 GT ./. chr1 39896372 . A . . LowGQX END=39896583 GT ./. chr1 39898205 . A . . LowGQX END=39898329 GT ./. chr1 39898718 . A . . LowGQX END=39898830 GT ./. chr1 39900084 . A . . LowGQX END=39900307 GT ./. chr1 39901228 . A . . LowGQX END=39901438 GT ./. chr1 39902106 . C . . LowGQX END=39902206 GT ./. chr1 39903290 . A . . LowGQX END=39903390 GT ./. chr1 39903446 . T . . LowGQX END=39903683 GT ./. chr1 39904944 . A . . LowGQX END=39905175 GT ./. chr1 39906673 . A . . LowGQX END=39906800 GT ./. chr1 39906894 . A . . LowGQX END=39907000 GT ./. chr1 39907562 . A . . LowGQX END=39907728 GT ./. chr1 39907817 . A . . LowGQX END=39907995 GT ./. chr1 39908082 . A . . LowGQX END=39908242 GT ./. chr1 39908384 . A . . LowGQX END=39908586 GT ./. chr1 39909116 . A . . LowGQX END=39909249 GT ./. chr1 39910332 . A . . LowGQX END=39910510 GT ./. chr1 39913102 . A . . LowGQX END=39913262 GT ./. chr1 39913362 . A . . LowGQX END=39913573 GT ./. chr1 39913703 . A . . LowGQX END=39913827 GT ./. chr1 39914264 . A . . LowGQX END=39914438 GT ./. chr1 39916722 . A . . LowGQX END=39916886 GT ./. chr1 39917826 . A . . LowGQX END=39918025 GT ./. chr1 39918354 . A . . LowGQX END=39918487 GT ./. chr1 39919377 . A . . LowGQX END=39919525 GT ./. chr1 39920579 . A . . LowGQX END=39920772 GT ./. chr1 39924040 . A . . LowGQX END=39924165 GT ./. chr1 39924756 . A . . LowGQX END=39924924 GT ./. chr1 39925448 . C . . LowGQX END=39925548 GT ./. chr1 39926302 . A . . LowGQX END=39926469 GT ./. chr1 39927553 . A . . LowGQX END=39927712 GT ./. chr1 39929272 . C . . LowGQX END=39929372 GT ./. chr1 39930726 . T . . LowGQX END=39930826 GT ./. chr1 39934285 . A . . LowGQX END=39934407 GT ./. chr1 39935203 . G . . LowGQX END=39935303 GT ./. chr1 39945468 . A . . LowGQX END=39945684 GT ./. chr1 39946591 . G . . LowGQX END=39946703 GT ./. chr1 39950271 . A . . LowGQX END=39950495 GT ./. chr1 39951208 . A . . LowGQX END=39951469 GT ./. chr1 39957651 . C . . LowGQX END=39958001 GT ./. chr1 39976833 . C . . LowGQX END=39977038 GT ./. chr1 39977395 . G . . LowGQX END=39977579 GT ./. chr1 39987035 . C . . LowGQX END=39987245 GT ./. chr1 39988065 . G . . LowGQX END=39988165 GT ./. chr1 39988677 . A . . LowGQX END=39988792 GT ./. chr1 39991319 . A . . LowGQX END=39991473 GT ./. chr1 40026738 . T . . LowGQX END=40026838 GT ./. chr1 40027365 . C . . LowGQX END=40027465 GT ./. chr1 40027743 . A . . LowGQX END=40027878 GT ./. chr1 40027992 . C . . LowGQX END=40028092 GT ./. chr1 40029284 . A . . LowGQX END=40029416 GT ./. chr1 40029502 . T . . LowGQX END=40029602 GT ./. chr1 40030094 . C . . LowGQX END=40030217 GT ./. chr1 40030352 . A . . LowGQX END=40030452 GT ./. chr1 40030776 . A . . LowGQX END=40031053 GT ./. chr1 40033046 . A . . LowGQX END=40033183 GT ./. chr1 40033421 . A . . LowGQX END=40033521 GT ./. chr1 40034472 . A . . LowGQX END=40034614 GT ./. chr1 40035265 . A . . LowGQX END=40035365 GT ./. chr1 40035533 . A . . LowGQX END=40035677 GT ./. chr1 40036904 . A . . LowGQX END=40037024 GT ./. chr1 40037279 . A . . LowGQX END=40037379 GT ./. chr1 40038063 . A . . LowGQX END=40038261 GT ./. chr1 40041429 . A . . LowGQX END=40041626 GT ./. chr1 40092177 . G . . LowGQX END=40092855 GT ./. chr1 40095890 . C . . LowGQX END=40095990 GT ./. chr1 40097160 . T . . LowGQX END=40097260 GT ./. chr1 40098305 . T . . LowGQX END=40098405 GT ./. chr1 40105148 . G . . LowGQX END=40105308 GT ./. chr1 40124791 . A . . LowGQX END=40125161 GT ./. chr1 40126749 . A . . LowGQX END=40126938 GT ./. chr1 40128982 . A . . LowGQX END=40129109 GT ./. chr1 40131191 . A . . LowGQX END=40131325 GT ./. chr1 40131739 . A . . LowGQX END=40131911 GT ./. chr1 40137543 . C . . LowGQX END=40137713 GT ./. chr1 40148206 . T . . LowGQX END=40148408 GT ./. chr1 40149607 . A . . LowGQX END=40149827 GT ./. chr1 40150112 . A . . LowGQX END=40150278 GT ./. chr1 40204479 . C . . LowGQX END=40204639 GT ./. chr1 40205835 . A . . LowGQX END=40205938 GT ./. chr1 40207010 . T . . LowGQX END=40207110 GT ./. chr1 40207531 . C . . LowGQX END=40207631 GT ./. chr1 40208879 . T . . LowGQX END=40208979 GT ./. chr1 40209494 . A . . LowGQX END=40209599 GT ./. chr1 40211045 . A . . LowGQX END=40211173 GT ./. chr1 40214562 . T . . LowGQX END=40214763 GT ./. chr1 40218580 . A . . LowGQX END=40218760 GT ./. chr1 40218944 . T . . LowGQX END=40219044 GT ./. chr1 40226089 . A . . LowGQX END=40226243 GT ./. chr1 40228188 . G . . LowGQX END=40228297 GT ./. chr1 40228710 . T . . LowGQX END=40228877 GT ./. chr1 40229356 . T . . LowGQX END=40229466 GT ./. chr1 40230282 . G . . LowGQX END=40230681 GT ./. chr1 40235372 . C . . LowGQX END=40236935 GT ./. chr1 40239978 . A . . LowGQX END=40240167 GT ./. chr1 40240508 . A . . LowGQX END=40240713 GT ./. chr1 40253811 . C . . LowGQX END=40254161 GT ./. chr1 40307414 . T . . LowGQX END=40307588 GT ./. chr1 40309771 . A . . LowGQX END=40309893 GT ./. chr1 40310201 . A . . LowGQX END=40310315 GT ./. chr1 40312881 . A . . LowGQX END=40312981 GT ./. chr1 40313218 . A . . LowGQX END=40313335 GT ./. chr1 40313656 . A . . LowGQX END=40313772 GT ./. chr1 40315789 . A . . LowGQX END=40315936 GT ./. chr1 40318401 . A . . LowGQX END=40318551 GT ./. chr1 40319620 . G . . LowGQX END=40319743 GT ./. chr1 40322946 . T . . LowGQX END=40323092 GT ./. chr1 40348968 . C . . LowGQX END=40349166 GT ./. chr1 40363042 . A . . LowGQX END=40363645 GT ./. chr1 40366485 . T . . LowGQX END=40367116 GT ./. chr1 40367418 . C . . LowGQX END=40367570 GT ./. chr1 40420963 . T . . LowGQX END=40421481 GT ./. chr1 40422726 . C . . LowGQX END=40422896 GT ./. chr1 40424303 . T . . LowGQX END=40424500 GT ./. chr1 40430881 . A . . LowGQX END=40431009 GT ./. chr1 40431133 . T . . LowGQX END=40431233 GT ./. chr1 40431527 . A . . LowGQX END=40431689 GT ./. chr1 40432269 . A . . LowGQX END=40432369 GT ./. chr1 40432481 . A . . LowGQX END=40432607 GT ./. chr1 40432750 . A . . LowGQX END=40432850 GT ./. chr1 40433292 . A . . LowGQX END=40433392 GT ./. chr1 40433474 . A . . LowGQX END=40433591 GT ./. chr1 40434004 . A . . LowGQX END=40434152 GT ./. chr1 40434239 . A . . LowGQX END=40434420 GT ./. chr1 40435099 . G . . LowGQX END=40435315 GT ./. chr1 40525017 . T . . LowGQX END=40525133 GT ./. chr1 40525737 . A . . LowGQX END=40525845 GT ./. chr1 40527396 . C . . LowGQX END=40527496 GT ./. chr1 40529897 . A . . LowGQX END=40530045 GT ./. chr1 40530139 . T . . LowGQX END=40530239 GT ./. chr1 40531885 . A . . LowGQX END=40531995 GT ./. chr1 40533199 . C . . LowGQX END=40533410 GT ./. chr1 40535349 . G . . LowGQX END=40535549 GT ./. chr1 40535829 . A . . LowGQX END=40535957 GT ./. chr1 40536094 . T . . LowGQX END=40536194 GT ./. chr1 40536506 . A . . LowGQX END=40536654 GT ./. chr1 40537114 . A . . LowGQX END=40537214 GT ./. chr1 40539682 . G . . LowGQX END=40539907 GT ./. chr1 40542463 . C . . LowGQX END=40542637 GT ./. chr1 40544181 . C . . LowGQX END=40544382 GT ./. chr1 40544446 . G . . LowGQX END=40544546 GT ./. chr1 40546018 . C . . LowGQX END=40546211 GT ./. chr1 40555031 . A . . LowGQX END=40555300 GT ./. chr1 40556946 . C . . LowGQX END=40557123 GT ./. chr1 40557666 . A . . LowGQX END=40557896 GT ./. chr1 40558019 . C . . LowGQX END=40558231 GT ./. chr1 40559599 . T . . LowGQX END=40559699 GT ./. chr1 40562736 . G . . LowGQX END=40562962 GT ./. chr1 40627045 . G . . LowGQX END=40627380 GT ./. chr1 40654725 . A . . LowGQX END=40654884 GT ./. chr1 40656435 . T . . LowGQX END=40656535 GT ./. chr1 40661302 . A . . LowGQX END=40661439 GT ./. chr1 40668012 . A . . LowGQX END=40668332 GT ./. chr1 40688244 . A . . LowGQX END=40688385 GT ./. chr1 40697158 . A . . LowGQX END=40697333 GT ./. chr1 40701462 . A . . LowGQX END=40706122 GT ./. chr1 40713664 . A . . LowGQX END=40713905 GT ./. chr1 40716943 . G . . LowGQX END=40717269 GT ./. chr1 40723893 . T . . LowGQX END=40724118 GT ./. chr1 40726460 . T . . LowGQX END=40726709 GT ./. chr1 40733407 . G . . LowGQX END=40733596 GT ./. chr1 40734040 . T . . LowGQX END=40734259 GT ./. chr1 40735596 . A . . LowGQX END=40735851 GT ./. chr1 40737515 . G . . LowGQX END=40737759 GT ./. chr1 40746964 . G . . LowGQX END=40747241 GT ./. chr1 40751546 . A . . LowGQX END=40751753 GT ./. chr1 40756475 . T . . LowGQX END=40756721 GT ./. chr1 40758066 . T . . LowGQX END=40758393 GT ./. chr1 40766803 . A . . LowGQX END=40767105 GT ./. chr1 40767433 . T . . LowGQX END=40767613 GT ./. chr1 40768242 . G . . LowGQX END=40768533 GT ./. chr1 40768752 . G . . LowGQX END=40768909 GT ./. chr1 40769151 . C . . LowGQX END=40769400 GT ./. chr1 40769428 . A . . LowGQX END=40769823 GT ./. chr1 40769941 . C . . LowGQX END=40770253 GT ./. chr1 40770415 . G . . LowGQX END=40770571 GT ./. chr1 40771334 . C . . LowGQX END=40771492 GT ./. chr1 40771764 . T . . LowGQX END=40771911 GT ./. chr1 40773067 . T . . LowGQX END=40773223 GT ./. chr1 40773324 . G . . LowGQX END=40773480 GT ./. chr1 40773813 . G . . LowGQX END=40773969 GT ./. chr1 40775559 . C . . LowGQX END=40775715 GT ./. chr1 40775732 . G . . LowGQX END=40776041 GT ./. chr1 40776335 . G . . LowGQX END=40776491 GT ./. chr1 40776714 . A . . LowGQX END=40777010 GT ./. chr1 40777121 . T . . LowGQX END=40777271 GT ./. chr1 40777283 . C . . LowGQX END=40777439 GT ./. chr1 40777668 . C . . LowGQX END=40777836 GT ./. chr1 40778077 . C . . LowGQX END=40778333 GT ./. chr1 40778352 . C . . LowGQX END=40778508 GT ./. chr1 40779826 . A . . LowGQX END=40780111 GT ./. chr1 40781209 . T . . LowGQX END=40781388 GT ./. chr1 40782233 . C . . LowGQX END=40782393 GT ./. chr1 40782684 . G . . LowGQX END=40782921 GT ./. chr1 40839791 . C . . LowGQX END=40839898 GT ./. chr1 40840324 . A . . LowGQX END=40840424 GT ./. chr1 40859083 . G . . LowGQX END=40859183 GT ./. chr1 40872406 . A . . LowGQX END=40872544 GT ./. chr1 40874318 . G . . LowGQX END=40874418 GT ./. chr1 40875419 . C . . LowGQX END=40875519 GT ./. chr1 40878682 . T . . LowGQX END=40878835 GT ./. chr1 40879822 . T . . LowGQX END=40879922 GT ./. chr1 40880942 . A . . LowGQX END=40881056 GT ./. chr1 40881846 . A . . LowGQX END=40882028 GT ./. chr1 40882450 . A . . LowGQX END=40882771 GT ./. chr1 40887646 . A . . LowGQX END=40887776 GT ./. chr1 40916633 . C . . LowGQX END=40916761 GT ./. chr1 40919868 . T . . LowGQX END=40919968 GT ./. chr1 40922566 . C . . LowGQX END=40922746 GT ./. chr1 40922881 . T . . LowGQX END=40923114 GT ./. chr1 40928091 . A . . LowGQX END=40929264 GT ./. chr1 40944982 . G . . LowGQX END=40945163 GT ./. chr1 40947431 . C . . LowGQX END=40947531 GT ./. chr1 40954708 . G . . LowGQX END=40954889 GT ./. chr1 40955148 . G . . LowGQX END=40955299 GT ./. chr1 40960591 . A . . LowGQX END=40961734 GT ./. chr1 40980215 . C . . LowGQX END=40981341 GT ./. chr1 40998797 . C . . LowGQX END=40998897 GT ./. chr1 41006256 . A . . LowGQX END=41006387 GT ./. chr1 41007285 . A . . LowGQX END=41007385 GT ./. chr1 41010027 . T . . LowGQX END=41010191 GT ./. chr1 41012232 . A . . LowGQX END=41013135 GT ./. chr1 41092138 . G . . LowGQX END=41092453 GT ./. chr1 41094431 . C . . LowGQX END=41094673 GT ./. chr1 41094892 . G . . LowGQX END=41095096 GT ./. chr1 41098690 . C . . LowGQX END=41098905 GT ./. chr1 41101537 . A . . LowGQX END=41101781 GT ./. chr1 41107330 . C . . LowGQX END=41107649 GT ./. chr1 41157295 . T . . LowGQX END=41157682 GT ./. chr1 41204514 . A . . LowGQX END=41204623 GT ./. chr1 41213192 . G . . LowGQX END=41213292 GT ./. chr1 41215243 . A . . LowGQX END=41215361 GT ./. chr1 41218821 . A . . LowGQX END=41218921 GT ./. chr1 41219963 . T . . LowGQX END=41220123 GT ./. chr1 41222955 . A . . LowGQX END=41223060 GT ./. chr1 41223780 . T . . LowGQX END=41223969 GT ./. chr1 41228558 . A . . LowGQX END=41228721 GT ./. chr1 41228985 . T . . LowGQX END=41229162 GT ./. chr1 41232266 . A . . LowGQX END=41232433 GT ./. chr1 41232568 . C . . LowGQX END=41232668 GT ./. chr1 41235008 . T . . LowGQX END=41235108 GT ./. chr1 41236068 . G . . LowGQX END=41236509 GT ./. chr1 41237053 . G . . LowGQX END=41237158 GT ./. chr1 41249715 . C . . LowGQX END=41250131 GT ./. chr1 41282886 . C . . LowGQX END=41283079 GT ./. chr1 41283785 . G . . LowGQX END=41284014 GT ./. chr1 41284126 . G . . LowGQX END=41284404 GT ./. chr1 41284968 . C . . LowGQX END=41285196 GT ./. chr1 41285496 . C . . LowGQX END=41285709 GT ./. chr1 41285786 . A . . LowGQX END=41285984 GT ./. chr1 41287935 . G . . LowGQX END=41288126 GT ./. chr1 41289718 . G . . LowGQX END=41289982 GT ./. chr1 41292279 . C . . LowGQX END=41292379 GT ./. chr1 41296705 . A . . LowGQX END=41297028 GT ./. chr1 41298635 . G . . LowGQX END=41298837 GT ./. chr1 41300588 . A . . LowGQX END=41300822 GT ./. chr1 41303286 . A . . LowGQX END=41303518 GT ./. chr1 41303932 . C . . LowGQX END=41304247 GT ./. chr1 41327232 . G . . LowGQX END=41327802 GT ./. chr1 41447613 . A . . LowGQX END=41447713 GT ./. chr1 41448949 . G . . LowGQX END=41449131 GT ./. chr1 41450491 . A . . LowGQX END=41450666 GT ./. chr1 41453042 . A . . LowGQX END=41453147 GT ./. chr1 41454264 . A . . LowGQX END=41454385 GT ./. chr1 41456775 . A . . LowGQX END=41456929 GT ./. chr1 41457428 . T . . LowGQX END=41457528 GT ./. chr1 41461587 . A . . LowGQX END=41461793 GT ./. chr1 41463064 . A . . LowGQX END=41463201 GT ./. chr1 41466696 . T . . LowGQX END=41466849 GT ./. chr1 41467830 . A . . LowGQX END=41467930 GT ./. chr1 41468768 . T . . LowGQX END=41468868 GT ./. chr1 41471695 . T . . LowGQX END=41471795 GT ./. chr1 41473119 . A . . LowGQX END=41473220 GT ./. chr1 41474309 . T . . LowGQX END=41474409 GT ./. chr1 41474464 . A . . LowGQX END=41474565 GT ./. chr1 41475115 . A . . LowGQX END=41475290 GT ./. chr1 41475826 . T . . LowGQX END=41475926 GT ./. chr1 41481776 . C . . LowGQX END=41481903 GT ./. chr1 41482904 . A . . LowGQX END=41483052 GT ./. chr1 41483305 . A . . LowGQX END=41483831 GT ./. chr1 41485896 . A . . LowGQX END=41486335 GT ./. chr1 41493864 . G . . LowGQX END=41493994 GT ./. chr1 41494254 . A . . LowGQX END=41494401 GT ./. chr1 41499638 . A . . LowGQX END=41499738 GT ./. chr1 41503032 . A . . LowGQX END=41503216 GT ./. chr1 41512077 . A . . LowGQX END=41512273 GT ./. chr1 41514360 . A . . LowGQX END=41514565 GT ./. chr1 41536265 . A . . LowGQX END=41536396 GT ./. chr1 41540889 . A . . LowGQX END=41541126 GT ./. chr1 41578953 . A . . LowGQX END=41579201 GT ./. chr1 41582589 . C . . LowGQX END=41582689 GT ./. chr1 41608548 . A . . LowGQX END=41608787 GT ./. chr1 41617272 . T . . LowGQX END=41617372 GT ./. chr1 41618259 . C . . LowGQX END=41618359 GT ./. chr1 41625350 . G . . LowGQX END=41625450 GT ./. chr1 41626456 . T . . LowGQX END=41626609 GT ./. chr1 41626965 . C . . LowGQX END=41627120 GT ./. chr1 41651749 . T . . LowGQX END=41651849 GT ./. chr1 41827591 . C . . LowGQX END=41828017 GT ./. chr1 41847287 . G . . LowGQX END=41848554 GT ./. chr1 41944923 . T . . LowGQX END=41945176 GT ./. chr1 41946371 . C . . LowGQX END=41946471 GT ./. chr1 41946764 . A . . LowGQX END=41946867 GT ./. chr1 41948094 . C . . LowGQX END=41948305 GT ./. chr1 41949716 . A . . LowGQX END=41949877 GT ./. chr1 41950191 . G . . LowGQX END=41950291 GT ./. chr1 41976120 . G . . LowGQX END=41976940 GT ./. chr1 41978485 . A . . LowGQX END=41979424 GT ./. chr1 41984067 . T . . LowGQX END=41984167 GT ./. chr1 41990384 . G . . LowGQX END=41990534 GT ./. chr1 41990535 . C . . LowGQX END=41990584;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 42041213 . A . . LowGQX END=42041363 GT ./. chr1 42045406 . A . . LowGQX END=42050471 GT ./. chr1 42619117 . G . . LowGQX END=42619217 GT ./. chr1 42620329 . A . . LowGQX END=42620540 GT ./. chr1 42621187 . C . . LowGQX END=42621287 GT ./. chr1 42628560 . G . . LowGQX END=42628660 GT ./. chr1 42629072 . A . . LowGQX END=42629284 GT ./. chr1 42630297 . C . . LowGQX END=42630397 GT ./. chr1 42645379 . C . . LowGQX END=42645499 GT ./. chr1 42647586 . A . . LowGQX END=42647698 GT ./. chr1 42654406 . A . . LowGQX END=42654602 GT ./. chr1 42654972 . A . . LowGQX END=42655078 GT ./. chr1 42656972 . A . . LowGQX END=42657393 GT ./. chr1 42660559 . A . . LowGQX END=42660738 GT ./. chr1 42664771 . A . . LowGQX END=42664904 GT ./. chr1 42671431 . A . . LowGQX END=42671537 GT ./. chr1 42693546 . G . . LowGQX END=42693646 GT ./. chr1 42730656 . T . . LowGQX END=42730863 GT ./. chr1 42744017 . A . . LowGQX END=42744346 GT ./. chr1 42776693 . A . . LowGQX END=42776793 GT ./. chr1 42846584 . G . . LowGQX END=42846771 GT ./. chr1 42865073 . A . . LowGQX END=42865308 GT ./. chr1 42870176 . T . . LowGQX END=42870276 GT ./. chr1 42875653 . A . . LowGQX END=42875861 GT ./. chr1 42880153 . A . . LowGQX END=42880648 GT ./. chr1 42896405 . C . . LowGQX END=42896532 GT ./. chr1 42898772 . C . . LowGQX END=42898962 GT ./. chr1 42900943 . A . . LowGQX END=42901059 GT ./. chr1 42902090 . A . . LowGQX END=42902217 GT ./. chr1 42905525 . A . . LowGQX END=42905699 GT ./. chr1 42914136 . A . . LowGQX END=42914312 GT ./. chr1 42915587 . A . . LowGQX END=42915733 GT ./. chr1 42921557 . A . . LowGQX END=42921716 GT ./. chr1 42922235 . A . . LowGQX END=42922747 GT ./. chr1 42922916 . A . . LowGQX END=42923052 GT ./. chr1 42925272 . A . . LowGQX END=42925600 GT ./. chr1 42986857 . A . . LowGQX END=42986957 GT ./. chr1 43002154 . A . . LowGQX END=43002275 GT ./. chr1 43002846 . T . . LowGQX END=43002946 GT ./. chr1 43004842 . A . . LowGQX END=43005022 GT ./. chr1 43008431 . A . . LowGQX END=43008531 GT ./. chr1 43011079 . A . . LowGQX END=43011279 GT ./. chr1 43021825 . A . . LowGQX END=43022079 GT ./. chr1 43023763 . C . . LowGQX END=43023863 GT ./. chr1 43031965 . A . . LowGQX END=43032149 GT ./. chr1 43042689 . A . . LowGQX END=43042903 GT ./. chr1 43046458 . C . . LowGQX END=43046558 GT ./. chr1 43047029 . A . . LowGQX END=43047188 GT ./. chr1 43054990 . A . . LowGQX END=43055167 GT ./. chr1 43076647 . A . . LowGQX END=43076764 GT ./. chr1 43102856 . A . . LowGQX END=43103105 GT ./. chr1 43108142 . A . . LowGQX END=43108283 GT ./. chr1 43110362 . A . . LowGQX END=43110481 GT ./. chr1 43111804 . A . . LowGQX END=43111991 GT ./. chr1 43119031 . C . . LowGQX END=43119131 GT ./. chr1 43119487 . A . . LowGQX END=43119702 GT ./. chr1 43124046 . A . . LowGQX END=43124201 GT ./. chr1 43124498 . T . . LowGQX END=43124598 GT ./. chr1 43124897 . A . . LowGQX END=43125042 GT ./. chr1 43125128 . A . . LowGQX END=43125240 GT ./. chr1 43126529 . T . . LowGQX END=43126629 GT ./. chr1 43130531 . C . . LowGQX END=43130682 GT ./. chr1 43131645 . C . . LowGQX END=43131745 GT ./. chr1 43132189 . A . . LowGQX END=43132289 GT ./. chr1 43133007 . T . . LowGQX END=43133107 GT ./. chr1 43148214 . C . . LowGQX END=43148405 GT ./. chr1 43148647 . G . . LowGQX END=43149037 GT ./. chr1 43149056 . C . . LowGQX END=43149156 GT ./. chr1 43159069 . T . . LowGQX END=43159228 GT ./. chr1 43161865 . A . . LowGQX END=43161965 GT ./. chr1 43162311 . A . . LowGQX END=43162618 GT ./. chr1 43162843 . T . . LowGQX END=43162943 GT ./. chr1 43166450 . A . . LowGQX END=43166689 GT ./. chr1 43200706 . A . . LowGQX END=43200857 GT ./. chr1 43201432 . C . . LowGQX END=43201753 GT ./. chr1 43203849 . G . . LowGQX END=43204036 GT ./. chr1 43204041 . G . . LowGQX END=43204308 GT ./. chr1 43205461 . T . . LowGQX END=43205786 GT ./. chr1 43212357 . C . . LowGQX END=43212524 GT ./. chr1 43212532 . A . . LowGQX END=43213135 GT ./. chr1 43213343 . G . . LowGQX END=43213521 GT ./. chr1 43213820 . G . . LowGQX END=43214040 GT ./. chr1 43215806 . A . . LowGQX END=43216059 GT ./. chr1 43217301 . T . . LowGQX END=43217506 GT ./. chr1 43217894 . C . . LowGQX END=43218092 GT ./. chr1 43218157 . G . . LowGQX END=43218387 GT ./. chr1 43220489 . T . . LowGQX END=43220713 GT ./. chr1 43220785 . C . . LowGQX END=43220940 GT ./. chr1 43221168 . C . . LowGQX END=43221360 GT ./. chr1 43223403 . C . . LowGQX END=43223645 GT ./. chr1 43224472 . T . . LowGQX END=43224706 GT ./. chr1 43224821 . C . . LowGQX END=43225113 GT ./. chr1 43227923 . C . . LowGQX END=43228198 GT ./. chr1 43232127 . A . . LowGQX END=43232694 GT ./. chr1 43232920 . G . . LowGQX END=43233298 GT ./. chr1 43239228 . C . . LowGQX END=43239328 GT ./. chr1 43240406 . A . . LowGQX END=43240542 GT ./. chr1 43240878 . A . . LowGQX END=43241068 GT ./. chr1 43255080 . C . . LowGQX END=43255180 GT ./. chr1 43255468 . T . . LowGQX END=43255606 GT ./. chr1 43258475 . G . . LowGQX END=43258575 GT ./. chr1 43259271 . G . . LowGQX END=43259416 GT ./. chr1 43260083 . G . . LowGQX END=43260286 GT ./. chr1 43263469 . T . . LowGQX END=43263569 GT ./. chr1 43263768 . G . . LowGQX END=43263897 GT ./. chr1 43273079 . G . . LowGQX END=43273179 GT ./. chr1 43282100 . A . . LowGQX END=43282218 GT ./. chr1 43282815 . A . . LowGQX END=43282925 GT ./. chr1 43291326 . T . . LowGQX END=43291426 GT ./. chr1 43296111 . C . . LowGQX END=43296211 GT ./. chr1 43296437 . A . . LowGQX END=43296789 GT ./. chr1 43300707 . A . . LowGQX END=43300828 GT ./. chr1 43301311 . C . . LowGQX END=43301470 GT ./. chr1 43302796 . A . . LowGQX END=43302896 GT ./. chr1 43304563 . G . . LowGQX END=43304663 GT ./. chr1 43305665 . G . . LowGQX END=43305765 GT ./. chr1 43305787 . A . . LowGQX END=43305887 GT ./. chr1 43305905 . C . . LowGQX END=43306005 GT ./. chr1 43308186 . A . . LowGQX END=43308906 GT ./. chr1 43314999 . C . . LowGQX END=43315099 GT ./. chr1 43315322 . C . . LowGQX END=43315422 GT ./. chr1 43316336 . C . . LowGQX END=43316436 GT ./. chr1 43316594 . G . . LowGQX END=43317487 GT ./. chr1 43317548 . T . . LowGQX END=43317648 GT ./. chr1 43392342 . G . . LowGQX END=43392442 GT ./. chr1 43392661 . A . . LowGQX END=43392964 GT ./. chr1 43393225 . C . . LowGQX END=43393531 GT ./. chr1 43394552 . G . . LowGQX END=43394756 GT ./. chr1 43394800 . G . . LowGQX END=43395195 GT ./. chr1 43395213 . T . . LowGQX END=43395758 GT ./. chr1 43396107 . G . . LowGQX END=43396589 GT ./. chr1 43396666 . G . . LowGQX END=43396929 GT ./. chr1 43408846 . G . . LowGQX END=43409044 GT ./. chr1 43417994 . A . . LowGQX END=43418094 GT ./. chr1 43424174 . C . . LowGQX END=43424392 GT ./. chr1 43610894 . G . . LowGQX END=43610994 GT ./. chr1 43613582 . G . . LowGQX END=43613756 GT ./. chr1 43616412 . G . . LowGQX END=43616512 GT ./. chr1 43618498 . G . . LowGQX END=43618651 GT ./. chr1 43621876 . G . . LowGQX END=43621985 GT ./. chr1 43630090 . G . . LowGQX END=43630190 GT ./. chr1 43630312 . A . . LowGQX END=43630479 GT ./. chr1 43632494 . C . . LowGQX END=43632645 GT ./. chr1 43632819 . A . . LowGQX END=43632919 GT ./. chr1 43634605 . C . . LowGQX END=43634705 GT ./. chr1 43636375 . T . . LowGQX END=43636553 GT ./. chr1 43637148 . A . . LowGQX END=43637325 GT ./. chr1 43637549 . A . . LowGQX END=43637649 GT ./. chr1 43637718 . A . . LowGQX END=43637818 GT ./. chr1 43637950 . C . . LowGQX END=43638093 GT ./. chr1 43638374 . C . . LowGQX END=43638633 GT ./. chr1 43642788 . T . . LowGQX END=43642888 GT ./. chr1 43647154 . C . . LowGQX END=43647573 GT ./. chr1 43649211 . A . . LowGQX END=43649600 GT ./. chr1 43650769 . T . . LowGQX END=43651079 GT ./. chr1 43652327 . C . . LowGQX END=43652582 GT ./. chr1 43663173 . A . . LowGQX END=43663415 GT ./. chr1 43664101 . G . . LowGQX END=43664369 GT ./. chr1 43665010 . T . . LowGQX END=43665226 GT ./. chr1 43672340 . G . . LowGQX END=43672655 GT ./. chr1 43675363 . T . . LowGQX END=43675828 GT ./. chr1 43680915 . T . . LowGQX END=43681088 GT ./. chr1 43685052 . G . . LowGQX END=43685266 GT ./. chr1 43687020 . G . . LowGQX END=43687137 GT ./. chr1 43687775 . G . . LowGQX END=43687967 GT ./. chr1 43688494 . G . . LowGQX END=43688669 GT ./. chr1 43689716 . G . . LowGQX END=43689876 GT ./. chr1 43692653 . G . . LowGQX END=43692798 GT ./. chr1 43697706 . C . . LowGQX END=43697836 GT ./. chr1 43698157 . T . . LowGQX END=43698296 GT ./. chr1 43699949 . G . . LowGQX END=43700085 GT ./. chr1 43700165 . G . . LowGQX END=43700310 GT ./. chr1 43708887 . C . . LowGQX END=43709031 GT ./. chr1 43719647 . G . . LowGQX END=43719863 GT ./. chr1 43738392 . C . . LowGQX END=43739056 GT ./. chr1 43748454 . G . . LowGQX END=43748781 GT ./. chr1 43748883 . G . . LowGQX END=43748983 GT ./. chr1 43766722 . G . . LowGQX END=43766822 GT ./. chr1 43770520 . A . . LowGQX END=43771017 GT ./. chr1 43772509 . A . . LowGQX END=43772783 GT ./. chr1 43772811 . A . . LowGQX END=43772947 GT ./. chr1 43773101 . A . . LowGQX END=43773246 GT ./. chr1 43773465 . A . . LowGQX END=43773598 GT ./. chr1 43774541 . G . . LowGQX END=43774641 GT ./. chr1 43774655 . A . . LowGQX END=43774805 GT ./. chr1 43775057 . A . . LowGQX END=43775206 GT ./. chr1 43777340 . A . . LowGQX END=43777503 GT ./. chr1 43777663 . A . . LowGQX END=43777805 GT ./. chr1 43777974 . A . . LowGQX END=43778275 GT ./. chr1 43778804 . A . . LowGQX END=43779135 GT ./. chr1 43779447 . A . . LowGQX END=43779802 GT ./. chr1 43782797 . G . . LowGQX END=43783147 GT ./. chr1 43783233 . A . . LowGQX END=43783348 GT ./. chr1 43783540 . C . . LowGQX END=43783746 GT ./. chr1 43784904 . A . . LowGQX END=43785022 GT ./. chr1 43785116 . C . . LowGQX END=43785216 GT ./. chr1 43786911 . G . . LowGQX END=43787011 GT ./. chr1 43787065 . A . . LowGQX END=43787166 GT ./. chr1 43787285 . A . . LowGQX END=43787389 GT ./. chr1 43788308 . T . . LowGQX END=43788408 GT ./. chr1 43803469 . C . . LowGQX END=43803650 GT ./. chr1 43803719 . A . . LowGQX END=43803954 GT ./. chr1 43804162 . T . . LowGQX END=43804443 GT ./. chr1 43804891 . A . . LowGQX END=43805292 GT ./. chr1 43805584 . T . . LowGQX END=43805849 GT ./. chr1 43806007 . T . . LowGQX END=43806236 GT ./. chr1 43812065 . T . . LowGQX END=43812352 GT ./. chr1 43812412 . A . . LowGQX END=43812657 GT ./. chr1 43814463 . G . . LowGQX END=43814725 GT ./. chr1 43814883 . G . . LowGQX END=43815123 GT ./. chr1 43817836 . C . . LowGQX END=43818026 GT ./. chr1 43818138 . C . . LowGQX END=43818495 GT ./. chr1 43824865 . C . . LowGQX END=43825070 GT ./. chr1 43825159 . A . . LowGQX END=43825312 GT ./. chr1 43825394 . A . . LowGQX END=43825495 GT ./. chr1 43825638 . A . . LowGQX END=43825771 GT ./. chr1 43825862 . A . . LowGQX END=43826063 GT ./. chr1 43826168 . A . . LowGQX END=43826268 GT ./. chr1 43826402 . A . . LowGQX END=43826635 GT ./. chr1 43826748 . G . . LowGQX END=43826919 GT ./. chr1 43827864 . A . . LowGQX END=43827986 GT ./. chr1 43828620 . A . . LowGQX END=43828860 GT ./. chr1 43829585 . T . . LowGQX END=43829811 GT ./. chr1 43829993 . A . . LowGQX END=43830134 GT ./. chr1 43830211 . A . . LowGQX END=43830321 GT ./. chr1 43830388 . A . . LowGQX END=43830488 GT ./. chr1 43830590 . C . . LowGQX END=43830690 GT ./. chr1 43830855 . A . . LowGQX END=43831050 GT ./. chr1 43831208 . G . . LowGQX END=43831308 GT ./. chr1 43850120 . T . . LowGQX END=43850224 GT ./. chr1 43850695 . C . . LowGQX END=43850795 GT ./. chr1 43851648 . C . . LowGQX END=43851898 GT ./. chr1 43852251 . C . . LowGQX END=43852351 GT ./. chr1 43852528 . C . . LowGQX END=43852670 GT ./. chr1 43853173 . C . . LowGQX END=43853319 GT ./. chr1 43853980 . C . . LowGQX END=43854100 GT ./. chr1 43855383 . T . . LowGQX END=43855483 GT ./. chr1 43855544 . C . . LowGQX END=43855704 GT ./. chr1 43868846 . A . . LowGQX END=43868976 GT ./. chr1 43869271 . G . . LowGQX END=43869448 GT ./. chr1 43870049 . A . . LowGQX END=43870224 GT ./. chr1 43871866 . C . . LowGQX END=43872026 GT ./. chr1 43875119 . A . . LowGQX END=43875219 GT ./. chr1 43880752 . G . . LowGQX END=43880885 GT ./. chr1 43881630 . G . . LowGQX END=43881773 GT ./. chr1 43882205 . G . . LowGQX END=43882313 GT ./. chr1 43885404 . G . . LowGQX END=43885616 GT ./. chr1 43885823 . G . . LowGQX END=43885995 GT ./. chr1 43886419 . G . . LowGQX END=43886655 GT ./. chr1 43886804 . G . . LowGQX END=43886975 GT ./. chr1 43887753 . G . . LowGQX END=43887897 GT ./. chr1 43888150 . G . . LowGQX END=43888304 GT ./. chr1 43888439 . G . . LowGQX END=43888555 GT ./. chr1 43888734 . T . . LowGQX END=43888988 GT ./. chr1 43889887 . G . . LowGQX END=43890104 GT ./. chr1 43890445 . G . . LowGQX END=43890545 GT ./. chr1 43890782 . A . . LowGQX END=43890882 GT ./. chr1 43891143 . A . . LowGQX END=43891316 GT ./. chr1 43891504 . A . . LowGQX END=43891623 GT ./. chr1 43891707 . A . . LowGQX END=43891825 GT ./. chr1 43892069 . C . . LowGQX END=43892169 GT ./. chr1 43892384 . A . . LowGQX END=43892484 GT ./. chr1 43892725 . A . . LowGQX END=43892853 GT ./. chr1 43892950 . A . . LowGQX END=43893119 GT ./. chr1 43893199 . A . . LowGQX END=43893408 GT ./. chr1 43893672 . A . . LowGQX END=43893792 GT ./. chr1 43893909 . A . . LowGQX END=43894160 GT ./. chr1 43895372 . A . . LowGQX END=43895518 GT ./. chr1 43895679 . C . . LowGQX END=43895779 GT ./. chr1 43895912 . T . . LowGQX END=43896072 GT ./. chr1 43896165 . A . . LowGQX END=43896463 GT ./. chr1 43896618 . A . . LowGQX END=43896764 GT ./. chr1 43896934 . A . . LowGQX END=43897046 GT ./. chr1 43897113 . A . . LowGQX END=43897213 GT ./. chr1 43897385 . A . . LowGQX END=43897575 GT ./. chr1 43897941 . A . . LowGQX END=43898113 GT ./. chr1 43898182 . C . . LowGQX END=43898282 GT ./. chr1 43898385 . C . . LowGQX END=43898485 GT ./. chr1 43898658 . A . . LowGQX END=43898864 GT ./. chr1 43899997 . A . . LowGQX END=43900215 GT ./. chr1 43900869 . A . . LowGQX END=43901003 GT ./. chr1 43902840 . A . . LowGQX END=43902997 GT ./. chr1 43903075 . A . . LowGQX END=43903182 GT ./. chr1 43903264 . A . . LowGQX END=43903374 GT ./. chr1 43903460 . A . . LowGQX END=43903576 GT ./. chr1 43904318 . G . . LowGQX END=43904491 GT ./. chr1 43904598 . A . . LowGQX END=43904767 GT ./. chr1 43904962 . G . . LowGQX END=43905122 GT ./. chr1 43905244 . A . . LowGQX END=43905443 GT ./. chr1 43905550 . A . . LowGQX END=43905732 GT ./. chr1 43906122 . A . . LowGQX END=43906260 GT ./. chr1 43906883 . A . . LowGQX END=43907054 GT ./. chr1 43907173 . A . . LowGQX END=43907275 GT ./. chr1 43907355 . A . . LowGQX END=43907492 GT ./. chr1 43907669 . A . . LowGQX END=43907804 GT ./. chr1 43907937 . A . . LowGQX END=43908042 GT ./. chr1 43908111 . A . . LowGQX END=43908292 GT ./. chr1 43908488 . A . . LowGQX END=43908760 GT ./. chr1 43908849 . C . . LowGQX END=43908949 GT ./. chr1 43909021 . A . . LowGQX END=43909151 GT ./. chr1 43909266 . A . . LowGQX END=43909268;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909269 . G . . LowGQX . GT ./. chr1 43909270 . G . . LowGQX END=43909272;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909273 . C . . LowGQX . GT ./. chr1 43909274 . C . . LowGQX END=43909281;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909282 . T . . LowGQX . GT ./. chr1 43909283 . G . . LowGQX END=43909284;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909285 . G . . LowGQX . GT ./. chr1 43909286 . T . . LowGQX END=43909289;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909290 . G . . LowGQX END=43909291 GT ./. chr1 43909292 . T . . LowGQX END=43909293;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909294 . T . . LowGQX . GT ./. chr1 43909295 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909296 . G . . LowGQX END=43909297 GT ./. chr1 43909298 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909299 . G . . LowGQX END=43909301 GT ./. chr1 43909302 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909303 . A . . LowGQX END=43909304 GT ./. chr1 43909305 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909306 . G . . LowGQX END=43909307 GT ./. chr1 43909308 . C . . LowGQX END=43909312;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909313 . A . . LowGQX . GT ./. chr1 43909314 . C . . LowGQX END=43909315;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909316 . A . . LowGQX . GT ./. chr1 43909317 . G . . LowGQX END=43909319;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909320 . G . . LowGQX END=43909322 GT ./. chr1 43909323 . A . . LowGQX END=43909324;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909325 . T . . LowGQX END=43909326 GT ./. chr1 43909327 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909328 . T . . LowGQX END=43909329 GT ./. chr1 43909330 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909331 . G . . LowGQX . GT ./. chr1 43909332 . A . . LowGQX END=43909333;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909334 . G . . LowGQX . GT ./. chr1 43909335 . T . . LowGQX END=43909336;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909337 . T . . LowGQX . GT ./. chr1 43909338 . C . . LowGQX END=43909341;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 43909342 . C . . LowGQX END=43909470 GT ./. chr1 43911473 . A . . LowGQX END=43911658 GT ./. chr1 43911841 . T . . LowGQX END=43911941 GT ./. chr1 43912001 . C . . LowGQX END=43912101 GT ./. chr1 43912624 . A . . LowGQX END=43912842 GT ./. chr1 43913214 . A . . LowGQX END=43913372 GT ./. chr1 43913518 . A . . LowGQX END=43913645 GT ./. chr1 43913748 . A . . LowGQX END=43914158 GT ./. chr1 43914281 . A . . LowGQX END=43914402 GT ./. chr1 43915759 . C . . LowGQX END=43915859 GT ./. chr1 43916006 . A . . LowGQX END=43916154 GT ./. chr1 43916510 . C . . LowGQX END=43916777 GT ./. chr1 43916896 . G . . LowGQX END=43916996 GT ./. chr1 43917009 . C . . LowGQX END=43917218 GT ./. chr1 43917304 . G . . LowGQX END=43917404 GT ./. chr1 43917444 . C . . LowGQX END=43917544 GT ./. chr1 43917596 . G . . LowGQX END=43917696 GT ./. chr1 43917874 . A . . LowGQX END=43918101 GT ./. chr1 43918573 . C . . LowGQX END=43918676 GT ./. chr1 43919002 . G . . LowGQX END=43919169 GT ./. chr1 43919264 . A . . LowGQX END=43919465 GT ./. chr1 43998154 . C . . LowGQX END=43998314 GT ./. chr1 44010743 . C . . LowGQX END=44010843 GT ./. chr1 44019161 . A . . LowGQX END=44019311 GT ./. chr1 44019469 . A . . LowGQX END=44019615 GT ./. chr1 44035259 . A . . LowGQX END=44035452 GT ./. chr1 44041540 . G . . LowGQX END=44041640 GT ./. chr1 44044479 . A . . LowGQX END=44044957 GT ./. chr1 44054395 . C . . LowGQX END=44054674 GT ./. chr1 44056641 . A . . LowGQX END=44057227 GT ./. chr1 44057481 . A . . LowGQX END=44057622 GT ./. chr1 44058126 . A . . LowGQX END=44058275 GT ./. chr1 44063417 . A . . LowGQX END=44063727 GT ./. chr1 44064389 . A . . LowGQX END=44064587 GT ./. chr1 44067706 . A . . LowGQX END=44067806 GT ./. chr1 44069085 . A . . LowGQX END=44069207 GT ./. chr1 44069280 . A . . LowGQX END=44069863 GT ./. chr1 44070572 . A . . LowGQX END=44070674 GT ./. chr1 44070859 . A . . LowGQX END=44071117 GT ./. chr1 44071197 . C . . LowGQX END=44071297 GT ./. chr1 44071909 . A . . LowGQX END=44072132 GT ./. chr1 44072483 . A . . LowGQX END=44072642 GT ./. chr1 44075052 . A . . LowGQX END=44075172 GT ./. chr1 44078405 . T . . LowGQX END=44078505 GT ./. chr1 44079287 . A . . LowGQX END=44079389 GT ./. chr1 44083114 . A . . LowGQX END=44083242 GT ./. chr1 44083405 . A . . LowGQX END=44083585 GT ./. chr1 44084299 . A . . LowGQX END=44084423 GT ./. chr1 44084717 . A . . LowGQX END=44084876 GT ./. chr1 44084957 . A . . LowGQX END=44085182 GT ./. chr1 44085183 . T . . LowGQX END=44085214;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 44085215 . A . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 44085216 . G . . LowGQX END=44085220;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 44085221 . A . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 44085222 . C . . LowGQX END=44085240;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 44085241 . C . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 44085242 . A . . LowGQX END=44085247;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 44085349 . A . . LowGQX END=44085350;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 44085351 . T . . LowGQX END=44085532 GT ./. chr1 44085764 . A . . LowGQX END=44085895 GT ./. chr1 44086123 . A . . LowGQX . GT ./. chr1 44086124 . G . . LowGQX END=44086253;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 44086507 . A . . LowGQX END=44086666 GT ./. chr1 44086766 . A . . LowGQX END=44086906 GT ./. chr1 44087591 . C . . LowGQX END=44087691 GT ./. chr1 44118845 . A . . LowGQX END=44118987 GT ./. chr1 44121260 . A . . LowGQX END=44121440 GT ./. chr1 44125967 . A . . LowGQX END=44126086 GT ./. chr1 44128563 . A . . LowGQX END=44128761 GT ./. chr1 44131342 . C . . LowGQX END=44131442 GT ./. chr1 44132121 . A . . LowGQX END=44132229 GT ./. chr1 44132623 . A . . LowGQX END=44132765 GT ./. chr1 44133441 . A . . LowGQX END=44133693 GT ./. chr1 44134769 . A . . LowGQX END=44134973 GT ./. chr1 44137174 . A . . LowGQX END=44137549 GT ./. chr1 44149353 . A . . LowGQX END=44149478 GT ./. chr1 44154583 . A . . LowGQX END=44154769 GT ./. chr1 44156514 . A . . LowGQX END=44156723 GT ./. chr1 44157156 . G . . LowGQX END=44157256 GT ./. chr1 44157845 . C . . LowGQX END=44158005 GT ./. chr1 44159663 . A . . LowGQX END=44159776 GT ./. chr1 44160378 . A . . LowGQX END=44160568 GT ./. chr1 44163512 . A . . LowGQX END=44163687 GT ./. chr1 44169286 . A . . LowGQX END=44169410 GT ./. chr1 44169688 . T . . LowGQX END=44169788 GT ./. chr1 44169899 . A . . LowGQX END=44170044 GT ./. chr1 44201883 . A . . LowGQX END=44202148 GT ./. chr1 44257717 . C . . LowGQX END=44257872 GT ./. chr1 44266948 . G . . LowGQX END=44267048 GT ./. chr1 44280504 . A . . LowGQX END=44280657 GT ./. chr1 44290352 . C . . LowGQX END=44290606 GT ./. chr1 44303840 . C . . LowGQX END=44304035 GT ./. chr1 44323788 . C . . LowGQX END=44323888 GT ./. chr1 44344657 . G . . LowGQX END=44344757 GT ./. chr1 44344979 . C . . LowGQX END=44345079 GT ./. chr1 44360004 . A . . LowGQX END=44360201 GT ./. chr1 44363849 . A . . LowGQX END=44364022 GT ./. chr1 44364789 . A . . LowGQX END=44364988 GT ./. chr1 44365136 . C . . LowGQX END=44365451 GT ./. chr1 44386025 . C . . LowGQX END=44386274 GT ./. chr1 44386403 . C . . LowGQX END=44386652 GT ./. chr1 44395691 . G . . LowGQX END=44395945 GT ./. chr1 44401257 . G . . LowGQX END=44401409 GT ./. chr1 44401653 . C . . LowGQX END=44401912 GT ./. chr1 44401961 . G . . LowGQX END=44402440 GT ./. chr1 44413205 . G . . LowGQX END=44413365 GT ./. chr1 44415087 . A . . LowGQX END=44415828 GT ./. chr1 44421990 . A . . LowGQX END=44422135 GT ./. chr1 44422230 . A . . LowGQX END=44422376 GT ./. chr1 44422480 . A . . LowGQX END=44422651 GT ./. chr1 44422865 . A . . LowGQX END=44422990 GT ./. chr1 44423072 . A . . LowGQX END=44423224 GT ./. chr1 44423647 . A . . LowGQX END=44423833 GT ./. chr1 44423878 . C . . LowGQX END=44423978 GT ./. chr1 44424131 . A . . LowGQX END=44424270 GT ./. chr1 44424416 . A . . LowGQX END=44424564 GT ./. chr1 44425912 . T . . LowGQX END=44426012 GT ./. chr1 44426546 . A . . LowGQX END=44426688 GT ./. chr1 44426836 . A . . LowGQX END=44426937 GT ./. chr1 44429918 . G . . LowGQX END=44430018 GT ./. chr1 44432195 . G . . LowGQX END=44432316 GT ./. chr1 44432376 . T . . LowGQX END=44432476 GT ./. chr1 44432597 . T . . LowGQX END=44432697 GT ./. chr1 44432985 . A . . LowGQX END=44433171 GT ./. chr1 44433256 . A . . LowGQX END=44433357 GT ./. chr1 44435846 . T . . LowGQX END=44435997 GT ./. chr1 44436266 . A . . LowGQX END=44436479 GT ./. chr1 44436548 . A . . LowGQX END=44436864 GT ./. chr1 44437057 . A . . LowGQX END=44437745 GT ./. chr1 44437828 . A . . LowGQX END=44438009 GT ./. chr1 44438085 . A . . LowGQX END=44438214 GT ./. chr1 44440700 . C . . LowGQX END=44440980 GT ./. chr1 44441323 . A . . LowGQX END=44441423 GT ./. chr1 44441447 . C . . LowGQX END=44441547 GT ./. chr1 44441754 . C . . LowGQX END=44441854 GT ./. chr1 44441963 . C . . LowGQX END=44442063 GT ./. chr1 44442247 . C . . LowGQX END=44442347 GT ./. chr1 44442421 . T . . LowGQX END=44442521 GT ./. chr1 44442696 . A . . LowGQX END=44443084 GT ./. chr1 44443617 . T . . LowGQX END=44443717 GT ./. chr1 44445591 . G . . LowGQX END=44445736 GT ./. chr1 44445737 . G . . LowGQX END=44445751;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 44446780 . G . . LowGQX END=44447148 GT ./. chr1 44447359 . A . . LowGQX END=44447599 GT ./. chr1 44450535 . A . . LowGQX END=44450730 GT ./. chr1 44450948 . A . . LowGQX END=44451075 GT ./. chr1 44451187 . A . . LowGQX END=44451296 GT ./. chr1 44455968 . A . . LowGQX END=44456123 GT ./. chr1 44457280 . G . . LowGQX END=44457679 GT ./. chr1 44457882 . A . . LowGQX END=44458062 GT ./. chr1 44458193 . A . . LowGQX END=44458314 GT ./. chr1 44459548 . T . . LowGQX END=44459648 GT ./. chr1 44460758 . C . . LowGQX END=44460858 GT ./. chr1 44461258 . C . . LowGQX END=44461358 GT ./. chr1 44461440 . T . . LowGQX END=44461540 GT ./. chr1 44461608 . A . . LowGQX END=44461835 GT ./. chr1 44463205 . T . . LowGQX END=44463414 GT ./. chr1 44463525 . A . . LowGQX END=44463700 GT ./. chr1 44466436 . C . . LowGQX END=44466730 GT ./. chr1 44466834 . A . . LowGQX END=44466973 GT ./. chr1 44467060 . A . . LowGQX END=44467302 GT ./. chr1 44467983 . A . . LowGQX END=44468091 GT ./. chr1 44468182 . A . . LowGQX END=44468321 GT ./. chr1 44468523 . G . . LowGQX END=44468660 GT ./. chr1 44474023 . A . . LowGQX END=44474298 GT ./. chr1 44475635 . A . . LowGQX END=44475771 GT ./. chr1 44476396 . A . . LowGQX END=44476557 GT ./. chr1 44477231 . A . . LowGQX END=44477397 GT ./. chr1 44482653 . C . . LowGQX END=44482867 GT ./. chr1 44489885 . C . . LowGQX END=44489985 GT ./. chr1 44584571 . C . . LowGQX END=44584671 GT ./. chr1 44595023 . A . . LowGQX END=44595871 GT ./. chr1 44596182 . A . . LowGQX END=44596431 GT ./. chr1 44679424 . C . . LowGQX END=44679533 GT ./. chr1 44680018 . T . . LowGQX END=44680118 GT ./. chr1 44680200 . C . . LowGQX END=44680300 GT ./. chr1 44680373 . A . . LowGQX END=44680877 GT ./. chr1 44680937 . A . . LowGQX END=44681037 GT ./. chr1 44683867 . G . . LowGQX END=44684144 GT ./. chr1 44684258 . A . . LowGQX END=44684430 GT ./. chr1 44684726 . A . . LowGQX END=44684916 GT ./. chr1 44685064 . G . . LowGQX END=44685164 GT ./. chr1 44685465 . G . . LowGQX END=44685565 GT ./. chr1 44685687 . A . . LowGQX END=44685984 GT ./. chr1 44686211 . T . . LowGQX END=44686311 GT ./. chr1 44687222 . T . . LowGQX END=44687322 GT ./. chr1 44713609 . A . . LowGQX END=44713713 GT ./. chr1 44749650 . G . . LowGQX END=44749750 GT ./. chr1 44750494 . T . . LowGQX END=44750594 GT ./. chr1 44773978 . T . . LowGQX END=44774078 GT ./. chr1 44778769 . T . . LowGQX END=44778921 GT ./. chr1 44785298 . A . . LowGQX END=44785423 GT ./. chr1 44788396 . C . . LowGQX END=44788541 GT ./. chr1 44804715 . A . . LowGQX END=44804997 GT ./. chr1 44818510 . C . . LowGQX END=44818610 GT ./. chr1 44820531 . C . . LowGQX END=44820742 GT ./. chr1 44877768 . C . . LowGQX END=44878399 GT ./. chr1 45038626 . T . . LowGQX END=45038726 GT ./. chr1 45079835 . A . . LowGQX END=45079972 GT ./. chr1 45088387 . T . . LowGQX END=45088487 GT ./. chr1 45091967 . A . . LowGQX END=45092073 GT ./. chr1 45097804 . C . . LowGQX END=45097904 GT ./. chr1 45097987 . C . . LowGQX END=45098087 GT ./. chr1 45101215 . A . . LowGQX END=45101339 GT ./. chr1 45101669 . G . . LowGQX END=45101837 GT ./. chr1 45102044 . T . . LowGQX END=45102144 GT ./. chr1 45110368 . A . . LowGQX END=45110469 GT ./. chr1 45110661 . T . . LowGQX END=45110761 GT ./. chr1 45110871 . T . . LowGQX END=45110971 GT ./. chr1 45111031 . C . . LowGQX END=45111163 GT ./. chr1 45115331 . A . . LowGQX END=45115444 GT ./. chr1 45115513 . G . . LowGQX END=45115702 GT ./. chr1 45116362 . T . . LowGQX END=45116462 GT ./. chr1 45120229 . C . . LowGQX END=45120884 GT ./. chr1 45125844 . A . . LowGQX END=45125970 GT ./. chr1 45139984 . C . . LowGQX END=45140084 GT ./. chr1 45155369 . C . . LowGQX END=45155576 GT ./. chr1 45162758 . T . . LowGQX END=45162858 GT ./. chr1 45163734 . G . . LowGQX END=45163902 GT ./. chr1 45166594 . G . . LowGQX END=45166792 GT ./. chr1 45169753 . C . . LowGQX END=45169853 GT ./. chr1 45189793 . G . . LowGQX END=45189917 GT ./. chr1 45189978 . T . . LowGQX END=45190078 GT ./. chr1 45190160 . G . . LowGQX END=45190380 GT ./. chr1 45190423 . G . . LowGQX END=45190523 GT ./. chr1 45190799 . T . . LowGQX END=45190899 GT ./. chr1 45190962 . G . . LowGQX END=45191076 GT ./. chr1 45205603 . G . . LowGQX END=45205715 GT ./. chr1 45206583 . A . . LowGQX END=45206683 GT ./. chr1 45212380 . C . . LowGQX END=45212480 GT ./. chr1 45213004 . T . . LowGQX END=45213160 GT ./. chr1 45213299 . T . . LowGQX END=45213399 GT ./. chr1 45216112 . A . . LowGQX END=45216239 GT ./. chr1 45218802 . A . . LowGQX END=45218929 GT ./. chr1 45219403 . A . . LowGQX END=45219508 GT ./. chr1 45220360 . T . . LowGQX END=45220520 GT ./. chr1 45221579 . G . . LowGQX END=45221679 GT ./. chr1 45221745 . A . . LowGQX END=45221912 GT ./. chr1 45223224 . C . . LowGQX END=45223324 GT ./. chr1 45223562 . T . . LowGQX END=45223662 GT ./. chr1 45223717 . T . . LowGQX END=45223817 GT ./. chr1 45224876 . A . . LowGQX END=45225023 GT ./. chr1 45225950 . A . . LowGQX END=45226159 GT ./. chr1 45226262 . A . . LowGQX END=45226377 GT ./. chr1 45227572 . C . . LowGQX END=45227672 GT ./. chr1 45227885 . C . . LowGQX END=45227985 GT ./. chr1 45228016 . A . . LowGQX END=45228126 GT ./. chr1 45228215 . A . . LowGQX END=45228333 GT ./. chr1 45232496 . A . . LowGQX END=45232624 GT ./. chr1 45232761 . T . . LowGQX END=45232861 GT ./. chr1 45241221 . A . . LowGQX END=45241321 GT ./. chr1 45241524 . G . . LowGQX END=45241624 GT ./. chr1 45241654 . G . . LowGQX END=45241815 GT ./. chr1 45242163 . A . . LowGQX END=45242263 GT ./. chr1 45242295 . A . . LowGQX END=45242449 GT ./. chr1 45243284 . A . . LowGQX END=45243464 GT ./. chr1 45243500 . G . . LowGQX END=45243600 GT ./. chr1 45243670 . A . . LowGQX END=45243804 GT ./. chr1 45244047 . A . . LowGQX END=45244147 GT ./. chr1 45244246 . A . . LowGQX END=45244360 GT ./. chr1 45249869 . G . . LowGQX END=45250159 GT ./. chr1 45250269 . G . . LowGQX END=45250458 GT ./. chr1 45250568 . C . . LowGQX END=45250668 GT ./. chr1 45250778 . A . . LowGQX END=45250980 GT ./. chr1 45251260 . G . . LowGQX END=45251360 GT ./. chr1 45251744 . A . . LowGQX END=45251903 GT ./. chr1 45252133 . A . . LowGQX END=45252371 GT ./. chr1 45253042 . A . . LowGQX END=45253142 GT ./. chr1 45253224 . A . . LowGQX END=45253380 GT ./. chr1 45266050 . C . . LowGQX END=45266350 GT ./. chr1 45266510 . A . . LowGQX END=45266622 GT ./. chr1 45266706 . A . . LowGQX END=45266827 GT ./. chr1 45267292 . A . . LowGQX END=45267426 GT ./. chr1 45267511 . A . . LowGQX END=45267611 GT ./. chr1 45268430 . A . . LowGQX END=45268530 GT ./. chr1 45268625 . A . . LowGQX END=45268828 GT ./. chr1 45268938 . A . . LowGQX END=45269066 GT ./. chr1 45269268 . C . . LowGQX END=45269368 GT ./. chr1 45269600 . C . . LowGQX END=45269700 GT ./. chr1 45269827 . T . . LowGQX END=45269927 GT ./. chr1 45270009 . A . . LowGQX END=45270176 GT ./. chr1 45270320 . A . . LowGQX END=45270454 GT ./. chr1 45270936 . A . . LowGQX END=45271054 GT ./. chr1 45271157 . A . . LowGQX END=45271353 GT ./. chr1 45271673 . C . . LowGQX END=45272343 GT ./. chr1 45274486 . C . . LowGQX END=45274586 GT ./. chr1 45275884 . G . . LowGQX END=45276099 GT ./. chr1 45276143 . C . . LowGQX END=45276303 GT ./. chr1 45277691 . A . . LowGQX END=45277791 GT ./. chr1 45278052 . T . . LowGQX END=45278212 GT ./. chr1 45278652 . C . . LowGQX END=45278752 GT ./. chr1 45278809 . G . . LowGQX END=45278942 GT ./. chr1 45278995 . C . . LowGQX END=45279172 GT ./. chr1 45279309 . G . . LowGQX END=45279482 GT ./. chr1 45285973 . C . . LowGQX END=45286133 GT ./. chr1 45286339 . G . . LowGQX END=45286439 GT ./. chr1 45287496 . A . . LowGQX END=45287596 GT ./. chr1 45288036 . C . . LowGQX END=45288393 GT ./. chr1 45288690 . A . . LowGQX END=45289109 GT ./. chr1 45291871 . G . . LowGQX END=45292492 GT ./. chr1 45292523 . G . . LowGQX END=45293438 GT ./. chr1 45293464 . C . . LowGQX END=45293915 GT ./. chr1 45293917 . G . . LowGQX END=45294355 GT ./. chr1 45294603 . T . . LowGQX END=45295485 GT ./. chr1 45295530 . A . . LowGQX END=45295754 GT ./. chr1 45296469 . G . . LowGQX END=45296767 GT ./. chr1 45297327 . T . . LowGQX END=45297521 GT ./. chr1 45297596 . C . . LowGQX END=45297768 GT ./. chr1 45297773 . C . . LowGQX END=45298065 GT ./. chr1 45307468 . T . . LowGQX END=45307763 GT ./. chr1 45308479 . G . . LowGQX END=45308656 GT ./. chr1 45316572 . A . . LowGQX END=45316727 GT ./. chr1 45323325 . A . . LowGQX END=45323531 GT ./. chr1 45340312 . A . . LowGQX END=45340550 GT ./. chr1 45341239 . C . . LowGQX END=45341419 GT ./. chr1 45345439 . C . . LowGQX END=45345732 GT ./. chr1 45347233 . C . . LowGQX END=45347463 GT ./. chr1 45362976 . A . . LowGQX END=45363168 GT ./. chr1 45392249 . T . . LowGQX END=45392463 GT ./. chr1 45406270 . C . . LowGQX END=45406439 GT ./. chr1 45407127 . A . . LowGQX END=45407389 GT ./. chr1 45443936 . A . . LowGQX END=45444174 GT ./. chr1 45446642 . C . . LowGQX END=45446892 GT ./. chr1 45469157 . G . . LowGQX END=45469257 GT ./. chr1 45469327 . A . . LowGQX END=45469427 GT ./. chr1 45469518 . A . . LowGQX END=45469618 GT ./. chr1 45469720 . T . . LowGQX END=45469820 GT ./. chr1 45469918 . A . . LowGQX END=45470052 GT ./. chr1 45470270 . A . . LowGQX END=45470481 GT ./. chr1 45471461 . C . . LowGQX END=45471561 GT ./. chr1 45471667 . A . . LowGQX END=45471791 GT ./. chr1 45472362 . A . . LowGQX END=45472470 GT ./. chr1 45472606 . C . . LowGQX END=45472706 GT ./. chr1 45472868 . A . . LowGQX END=45472968 GT ./. chr1 45473083 . A . . LowGQX END=45473270 GT ./. chr1 45473910 . A . . LowGQX END=45474062 GT ./. chr1 45474206 . A . . LowGQX END=45474376 GT ./. chr1 45474808 . A . . LowGQX END=45474908 GT ./. chr1 45475039 . A . . LowGQX END=45475157 GT ./. chr1 45475238 . A . . LowGQX END=45475358 GT ./. chr1 45475656 . A . . LowGQX END=45475796 GT ./. chr1 45475870 . C . . LowGQX END=45475970 GT ./. chr1 45476186 . G . . LowGQX END=45476381 GT ./. chr1 45476559 . A . . LowGQX END=45476932 GT ./. chr1 45477804 . T . . LowGQX END=45478009 GT ./. chr1 45478528 . G . . LowGQX END=45478743 GT ./. chr1 45478757 . G . . LowGQX END=45479100 GT ./. chr1 45479215 . C . . LowGQX END=45479515 GT ./. chr1 45479530 . A . . LowGQX END=45479815 GT ./. chr1 45480060 . G . . LowGQX END=45480300 GT ./. chr1 45480357 . A . . LowGQX END=45480730 GT ./. chr1 45480958 . G . . LowGQX END=45481342 GT ./. chr1 45484124 . T . . LowGQX END=45484991 GT ./. chr1 45485729 . G . . LowGQX END=45485829 GT ./. chr1 45486295 . A . . LowGQX END=45486463 GT ./. chr1 45499982 . A . . LowGQX END=45500144 GT ./. chr1 45501358 . A . . LowGQX END=45501498 GT ./. chr1 45501709 . A . . LowGQX END=45501974 GT ./. chr1 45504606 . A . . LowGQX END=45504748 GT ./. chr1 45506062 . A . . LowGQX END=45506213 GT ./. chr1 45508889 . A . . LowGQX END=45509070 GT ./. chr1 45516744 . A . . LowGQX END=45516928 GT ./. chr1 45524279 . A . . LowGQX END=45524434 GT ./. chr1 45525769 . A . . LowGQX END=45525922 GT ./. chr1 45553551 . A . . LowGQX END=45553912 GT ./. chr1 45671415 . G . . LowGQX END=45672025 GT ./. chr1 45792819 . C . . LowGQX END=45793939 GT ./. chr1 45794927 . A . . LowGQX END=45795161 GT ./. chr1 45796137 . T . . LowGQX END=45796281 GT ./. chr1 45796803 . A . . LowGQX END=45797280 GT ./. chr1 45797282 . A . . LowGQX END=45797583 GT ./. chr1 45797644 . C . . LowGQX END=45798683 GT ./. chr1 45798718 . C . . LowGQX END=45798894 GT ./. chr1 45798906 . G . . LowGQX END=45799276 GT ./. chr1 45800012 . G . . LowGQX END=45800235 GT ./. chr1 45803814 . A . . LowGQX END=45803914 GT ./. chr1 45805479 . C . . LowGQX END=45805639 GT ./. chr1 45805833 . C . . LowGQX END=45806011 GT ./. chr1 45806743 . A . . LowGQX END=45806890 GT ./. chr1 45806946 . G . . LowGQX END=45807046 GT ./. chr1 45807143 . A . . LowGQX END=45807244 GT ./. chr1 45807619 . A . . LowGQX END=45807782 GT ./. chr1 45808054 . A . . LowGQX END=45808318 GT ./. chr1 45808367 . T . . LowGQX END=45808467 GT ./. chr1 45808513 . A . . LowGQX END=45808677 GT ./. chr1 45808752 . A . . LowGQX END=45809123 GT ./. chr1 45809124 . G . . LowGQX END=45809274;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 45809275 . G . . LowGQX END=45809314 GT ./. chr1 45809315 . T . . LowGQX END=45809319;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 45809320 . T . . LowGQX . GT ./. chr1 45809321 . C . . LowGQX END=45809333;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 45809334 . C . . LowGQX . GT ./. chr1 45809335 . C . . LowGQX END=45809377;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 45810510 . C . . LowGQX END=45811233 GT ./. chr1 45811547 . A . . LowGQX END=45811669 GT ./. chr1 45812359 . A . . LowGQX END=45812459 GT ./. chr1 45812643 . C . . LowGQX END=45812743 GT ./. chr1 45813274 . A . . LowGQX END=45813374 GT ./. chr1 45813582 . C . . LowGQX END=45813682 GT ./. chr1 45820933 . G . . LowGQX END=45821124 GT ./. chr1 45851559 . A . . LowGQX END=45851659 GT ./. chr1 45864600 . A . . LowGQX END=45864700 GT ./. chr1 45879474 . A . . LowGQX END=45879574 GT ./. chr1 45887395 . A . . LowGQX END=45887521 GT ./. chr1 45923234 . A . . LowGQX END=45923460 GT ./. chr1 45960730 . T . . LowGQX END=45960839 GT ./. chr1 45961082 . A . . LowGQX END=45961256 GT ./. chr1 45962062 . G . . LowGQX END=45962296 GT ./. chr1 45962963 . T . . LowGQX END=45963063 GT ./. chr1 45965016 . C . . LowGQX END=45965116 GT ./. chr1 45965193 . C . . LowGQX END=45965293 GT ./. chr1 45965954 . A . . LowGQX END=45966137 GT ./. chr1 45972977 . G . . LowGQX END=45973274 GT ./. chr1 45973833 . T . . LowGQX END=45974088 GT ./. chr1 45974417 . T . . LowGQX END=45974939 GT ./. chr1 45976994 . C . . LowGQX END=45977094 GT ./. chr1 45980177 . A . . LowGQX END=45980312 GT ./. chr1 45980543 . A . . LowGQX END=45980670 GT ./. chr1 45981294 . A . . LowGQX END=45981482 GT ./. chr1 45984558 . C . . LowGQX END=45984718 GT ./. chr1 46027459 . A . . LowGQX END=46027559 GT ./. chr1 46032239 . A . . LowGQX END=46032363 GT ./. chr1 46032539 . A . . LowGQX END=46032697 GT ./. chr1 46033652 . A . . LowGQX END=46033852 GT ./. chr1 46034155 . A . . LowGQX END=46034359 GT ./. chr1 46034586 . T . . LowGQX END=46034686 GT ./. chr1 46034809 . C . . LowGQX END=46034909 GT ./. chr1 46035546 . T . . LowGQX END=46035646 GT ./. chr1 46049799 . T . . LowGQX END=46049899 GT ./. chr1 46054252 . C . . LowGQX END=46054429 GT ./. chr1 46056869 . T . . LowGQX END=46057023 GT ./. chr1 46060347 . T . . LowGQX END=46060447 GT ./. chr1 46066043 . C . . LowGQX END=46066143 GT ./. chr1 46067925 . A . . LowGQX END=46068040 GT ./. chr1 46070599 . T . . LowGQX END=46070699 GT ./. chr1 46072152 . A . . LowGQX END=46072266 GT ./. chr1 46072935 . A . . LowGQX END=46074069 GT ./. chr1 46078831 . T . . LowGQX END=46078931 GT ./. chr1 46079761 . A . . LowGQX END=46079861 GT ./. chr1 46079952 . T . . LowGQX END=46080052 GT ./. chr1 46080683 . A . . LowGQX END=46080876 GT ./. chr1 46080975 . A . . LowGQX END=46081146 GT ./. chr1 46081988 . T . . LowGQX END=46082088 GT ./. chr1 46082287 . T . . LowGQX END=46082387 GT ./. chr1 46083102 . A . . LowGQX END=46083266 GT ./. chr1 46083724 . G . . LowGQX END=46083824 GT ./. chr1 46085916 . T . . LowGQX END=46086106 GT ./. chr1 46086317 . A . . LowGQX END=46086506 GT ./. chr1 46086574 . C . . LowGQX END=46086786 GT ./. chr1 46086952 . C . . LowGQX END=46087157 GT ./. chr1 46087309 . C . . LowGQX END=46087409 GT ./. chr1 46087548 . C . . LowGQX END=46087716 GT ./. chr1 46087862 . C . . LowGQX END=46088021 GT ./. chr1 46088220 . C . . LowGQX END=46088340 GT ./. chr1 46088415 . G . . LowGQX END=46088515 GT ./. chr1 46088626 . C . . LowGQX END=46088790 GT ./. chr1 46088888 . C . . LowGQX END=46089112 GT ./. chr1 46089227 . A . . LowGQX END=46089327 GT ./. chr1 46089407 . C . . LowGQX END=46089582 GT ./. chr1 46093926 . G . . LowGQX END=46094083 GT ./. chr1 46095246 . A . . LowGQX END=46095353 GT ./. chr1 46096152 . A . . LowGQX END=46096281 GT ./. chr1 46099159 . A . . LowGQX END=46099322 GT ./. chr1 46099766 . A . . LowGQX END=46099911 GT ./. chr1 46105880 . A . . LowGQX END=46106078 GT ./. chr1 46108086 . A . . LowGQX END=46108186 GT ./. chr1 46120213 . A . . LowGQX END=46120504 GT ./. chr1 46120820 . T . . LowGQX END=46120994 GT ./. chr1 46124680 . A . . LowGQX END=46124780 GT ./. chr1 46156712 . C . . LowGQX END=46156812 GT ./. chr1 46158874 . A . . LowGQX END=46159580 GT ./. chr1 46160029 . T . . LowGQX END=46160189 GT ./. chr1 46165636 . T . . LowGQX END=46165865 GT ./. chr1 46179916 . A . . LowGQX END=46180141 GT ./. chr1 46182565 . A . . LowGQX END=46182735 GT ./. chr1 46184833 . A . . LowGQX END=46185015 GT ./. chr1 46193301 . A . . LowGQX END=46193473 GT ./. chr1 46195244 . A . . LowGQX END=46195444 GT ./. chr1 46206571 . A . . LowGQX END=46207007 GT ./. chr1 46211790 . A . . LowGQX END=46212086 GT ./. chr1 46269555 . C . . LowGQX END=46269747 GT ./. chr1 46290103 . A . . LowGQX END=46290255 GT ./. chr1 46295109 . A . . LowGQX END=46295256 GT ./. chr1 46330742 . G . . LowGQX END=46330842 GT ./. chr1 46348002 . C . . LowGQX END=46348102 GT ./. chr1 46379477 . G . . LowGQX END=46379577 GT ./. chr1 46383011 . A . . LowGQX END=46383206 GT ./. chr1 46425054 . G . . LowGQX END=46425154 GT ./. chr1 46463384 . T . . LowGQX END=46463484 GT ./. chr1 46466591 . T . . LowGQX END=46466691 GT ./. chr1 46468467 . T . . LowGQX END=46468567 GT ./. chr1 46471911 . A . . LowGQX END=46472070 GT ./. chr1 46473956 . T . . LowGQX END=46474056 GT ./. chr1 46476400 . A . . LowGQX END=46476614 GT ./. chr1 46485266 . A . . LowGQX END=46485372 GT ./. chr1 46487620 . A . . LowGQX END=46487757 GT ./. chr1 46488563 . C . . LowGQX END=46488663 GT ./. chr1 46488898 . C . . LowGQX END=46488998 GT ./. chr1 46489442 . A . . LowGQX END=46489700 GT ./. chr1 46491347 . A . . LowGQX END=46491490 GT ./. chr1 46493401 . A . . LowGQX END=46493538 GT ./. chr1 46494408 . A . . LowGQX END=46494608 GT ./. chr1 46495136 . A . . LowGQX END=46495242 GT ./. chr1 46495501 . A . . LowGQX END=46495628 GT ./. chr1 46495799 . A . . LowGQX END=46495913 GT ./. chr1 46496247 . G . . LowGQX END=46496436 GT ./. chr1 46496676 . T . . LowGQX END=46496965 GT ./. chr1 46497061 . A . . LowGQX END=46497260 GT ./. chr1 46497848 . A . . LowGQX END=46498079 GT ./. chr1 46498266 . A . . LowGQX END=46498393 GT ./. chr1 46499472 . A . . LowGQX END=46499613 GT ./. chr1 46499743 . A . . LowGQX END=46499941 GT ./. chr1 46500208 . A . . LowGQX END=46501741 GT ./. chr1 46509343 . C . . LowGQX END=46509546 GT ./. chr1 46511558 . T . . LowGQX END=46511763 GT ./. chr1 46512211 . G . . LowGQX END=46512311 GT ./. chr1 46521465 . A . . LowGQX END=46521646 GT ./. chr1 46527559 . T . . LowGQX END=46527746 GT ./. chr1 46531674 . T . . LowGQX END=46531854 GT ./. chr1 46532561 . G . . LowGQX END=46532766 GT ./. chr1 46543185 . A . . LowGQX END=46543288 GT ./. chr1 46546312 . A . . LowGQX END=46546425 GT ./. chr1 46597335 . A . . LowGQX END=46597435 GT ./. chr1 46597517 . A . . LowGQX END=46597629 GT ./. chr1 46598285 . G . . LowGQX END=46598445 GT ./. chr1 46641899 . C . . LowGQX END=46642144 GT ./. chr1 46646759 . G . . LowGQX END=46646859 GT ./. chr1 46649861 . A . . LowGQX END=46650072 GT ./. chr1 46650254 . T . . LowGQX END=46650354 GT ./. chr1 46650455 . A . . LowGQX END=46650558 GT ./. chr1 46650630 . A . . LowGQX END=46650790 GT ./. chr1 46650889 . T . . LowGQX END=46650989 GT ./. chr1 46651072 . A . . LowGQX END=46651232 GT ./. chr1 46654390 . C . . LowGQX END=46654653 GT ./. chr1 46654913 . C . . LowGQX END=46655291 GT ./. chr1 46655475 . T . . LowGQX END=46655713 GT ./. chr1 46656094 . C . . LowGQX END=46656241 GT ./. chr1 46656341 . G . . LowGQX END=46656508 GT ./. chr1 46657701 . C . . LowGQX END=46658314 GT ./. chr1 46658521 . C . . LowGQX END=46658682 GT ./. chr1 46658795 . T . . LowGQX END=46659124 GT ./. chr1 46659185 . C . . LowGQX END=46659363 GT ./. chr1 46659476 . A . . LowGQX END=46659649 GT ./. chr1 46659895 . C . . LowGQX END=46660125 GT ./. chr1 46660174 . A . . LowGQX END=46660375 GT ./. chr1 46660465 . C . . LowGQX END=46660685 GT ./. chr1 46661414 . G . . LowGQX END=46661801 GT ./. chr1 46662352 . C . . LowGQX END=46662573 GT ./. chr1 46662591 . C . . LowGQX END=46662808 GT ./. chr1 46662957 . C . . LowGQX END=46663057 GT ./. chr1 46663323 . A . . LowGQX END=46663545 GT ./. chr1 46669026 . G . . LowGQX END=46669366 GT ./. chr1 46685369 . A . . LowGQX END=46685895 GT ./. chr1 46713999 . T . . LowGQX END=46714322 GT ./. chr1 46715621 . G . . LowGQX END=46715843 GT ./. chr1 46724307 . C . . LowGQX END=46724470 GT ./. chr1 46725585 . C . . LowGQX END=46725823 GT ./. chr1 46726163 . G . . LowGQX END=46726335 GT ./. chr1 46726348 . G . . LowGQX END=46726739 GT ./. chr1 46726882 . T . . LowGQX END=46727109 GT ./. chr1 46733080 . C . . LowGQX END=46733333 GT ./. chr1 46736280 . A . . LowGQX END=46736509 GT ./. chr1 46738085 . A . . LowGQX END=46738264 GT ./. chr1 46738293 . A . . LowGQX END=46738526 GT ./. chr1 46738976 . G . . LowGQX END=46739189 GT ./. chr1 46739245 . C . . LowGQX END=46739471 GT ./. chr1 46739759 . T . . LowGQX END=46739940 GT ./. chr1 46740159 . C . . LowGQX END=46740441 GT ./. chr1 46743438 . A . . LowGQX END=46744006 GT ./. chr1 46744376 . A . . LowGQX END=46744759 GT ./. chr1 46744842 . C . . LowGQX END=46744942 GT ./. chr1 46744948 . C . . LowGQX END=46745048 GT ./. chr1 46745114 . T . . LowGQX END=46745289 GT ./. chr1 46745862 . A . . LowGQX END=46745965 GT ./. chr1 46746066 . A . . LowGQX END=46746235 GT ./. chr1 46746795 . A . . LowGQX END=46747060 GT ./. chr1 46750897 . C . . LowGQX END=46752174 GT ./. chr1 46763221 . A . . LowGQX END=46763321 GT ./. chr1 46763950 . A . . LowGQX END=46764050 GT ./. chr1 46768794 . A . . LowGQX END=46768997 GT ./. chr1 46769416 . T . . LowGQX END=46769516 GT ./. chr1 46774677 . A . . LowGQX END=46774837 GT ./. chr1 46775825 . A . . LowGQX END=46775991 GT ./. chr1 46782132 . G . . LowGQX END=46782291 GT ./. chr1 46806496 . G . . LowGQX END=46806596 GT ./. chr1 46810471 . A . . LowGQX END=46810819 GT ./. chr1 46812591 . A . . LowGQX END=46812750 GT ./. chr1 46818538 . A . . LowGQX END=46818703 GT ./. chr1 46826374 . A . . LowGQX END=46826503 GT ./. chr1 46827240 . A . . LowGQX END=46827521 GT ./. chr1 46859970 . G . . LowGQX END=46860267 GT ./. chr1 46867712 . G . . LowGQX END=46867928 GT ./. chr1 46870635 . T . . LowGQX END=46870872 GT ./. chr1 46870993 . C . . LowGQX END=46871518 GT ./. chr1 46871659 . T . . LowGQX END=46871802 GT ./. chr1 46871865 . T . . LowGQX END=46872092 GT ./. chr1 46874080 . C . . LowGQX END=46874308 GT ./. chr1 46874722 . C . . LowGQX END=46874922 GT ./. chr1 46876019 . T . . LowGQX END=46876221 GT ./. chr1 46876435 . G . . LowGQX END=46876607 GT ./. chr1 46877233 . A . . LowGQX END=46877375 GT ./. chr1 46877764 . G . . LowGQX END=46877975 GT ./. chr1 46878696 . T . . LowGQX END=46878944 GT ./. chr1 46879068 . G . . LowGQX END=46879299 GT ./. chr1 46972681 . C . . LowGQX END=46972839 GT ./. chr1 46976132 . G . . LowGQX END=46976329 GT ./. chr1 46976605 . A . . LowGQX END=46976958 GT ./. chr1 46977713 . A . . LowGQX END=46978169 GT ./. chr1 47012998 . T . . LowGQX END=47013482 GT ./. chr1 47014852 . T . . LowGQX END=47014952 GT ./. chr1 47015590 . C . . LowGQX END=47015690 GT ./. chr1 47016736 . C . . LowGQX END=47016916 GT ./. chr1 47024245 . T . . LowGQX END=47024475 GT ./. chr1 47025878 . A . . LowGQX END=47025978 GT ./. chr1 47027148 . A . . LowGQX END=47027346 GT ./. chr1 47028309 . G . . LowGQX END=47028518 GT ./. chr1 47030711 . A . . LowGQX END=47030811 GT ./. chr1 47034093 . T . . LowGQX END=47034193 GT ./. chr1 47037088 . C . . LowGQX END=47037257 GT ./. chr1 47037733 . A . . LowGQX END=47037842 GT ./. chr1 47040600 . C . . LowGQX END=47040700 GT ./. chr1 47042237 . T . . LowGQX END=47042337 GT ./. chr1 47046159 . A . . LowGQX END=47046302 GT ./. chr1 47048524 . G . . LowGQX END=47048624 GT ./. chr1 47048898 . A . . LowGQX END=47049004 GT ./. chr1 47051504 . C . . LowGQX END=47051659 GT ./. chr1 47059783 . A . . LowGQX END=47059953 GT ./. chr1 47060469 . C . . LowGQX END=47060628 GT ./. chr1 47075232 . G . . LowGQX END=47075392 GT ./. chr1 47075672 . A . . LowGQX END=47075879 GT ./. chr1 47078574 . A . . LowGQX END=47079063 GT ./. chr1 47080641 . A . . LowGQX END=47080751 GT ./. chr1 47099370 . T . . LowGQX END=47099521 GT ./. chr1 47101446 . T . . LowGQX END=47101817 GT ./. chr1 47108814 . T . . LowGQX END=47108976 GT ./. chr1 47110831 . A . . LowGQX END=47110931 GT ./. chr1 47118227 . C . . LowGQX END=47118327 GT ./. chr1 47119465 . C . . LowGQX END=47119565 GT ./. chr1 47123727 . A . . LowGQX END=47123881 GT ./. chr1 47124335 . T . . LowGQX END=47124435 GT ./. chr1 47129534 . G . . LowGQX END=47129634 GT ./. chr1 47130926 . A . . LowGQX END=47131045 GT ./. chr1 47131270 . G . . LowGQX END=47131370 GT ./. chr1 47133716 . C . . LowGQX END=47134066 GT ./. chr1 47135081 . T . . LowGQX END=47135181 GT ./. chr1 47137444 . A . . LowGQX END=47137644 GT ./. chr1 47138544 . G . . LowGQX END=47139129 GT ./. chr1 47144101 . G . . LowGQX END=47144311 GT ./. chr1 47148970 . A . . LowGQX END=47149100 GT ./. chr1 47150161 . A . . LowGQX END=47150277 GT ./. chr1 47152394 . T . . LowGQX END=47152550 GT ./. chr1 47154023 . A . . LowGQX END=47154219 GT ./. chr1 47155257 . A . . LowGQX END=47155366 GT ./. chr1 47157497 . A . . LowGQX END=47157612 GT ./. chr1 47162221 . A . . LowGQX END=47162324 GT ./. chr1 47173576 . A . . LowGQX END=47173726 GT ./. chr1 47181965 . A . . LowGQX END=47182118 GT ./. chr1 47183573 . A . . LowGQX END=47183762 GT ./. chr1 47264752 . C . . LowGQX END=47264936 GT ./. chr1 47276478 . A . . LowGQX END=47276624 GT ./. chr1 47276785 . G . . LowGQX END=47276885 GT ./. chr1 47277845 . C . . LowGQX END=47277945 GT ./. chr1 47278166 . A . . LowGQX END=47278298 GT ./. chr1 47279152 . A . . LowGQX END=47279281 GT ./. chr1 47279579 . A . . LowGQX END=47279738 GT ./. chr1 47279879 . A . . LowGQX END=47279990 GT ./. chr1 47280733 . T . . LowGQX END=47280941 GT ./. chr1 47282718 . A . . LowGQX END=47282856 GT ./. chr1 47283620 . C . . LowGQX END=47283720 GT ./. chr1 47283795 . C . . LowGQX END=47283895 GT ./. chr1 47284301 . A . . LowGQX END=47284489 GT ./. chr1 47395785 . C . . LowGQX END=47395985 GT ./. chr1 47398420 . C . . LowGQX END=47398520 GT ./. chr1 47398638 . T . . LowGQX END=47398738 GT ./. chr1 47399616 . A . . LowGQX END=47399754 GT ./. chr1 47399846 . A . . LowGQX END=47400041 GT ./. chr1 47400123 . A . . LowGQX END=47400234 GT ./. chr1 47400670 . A . . LowGQX END=47400829 GT ./. chr1 47401193 . A . . LowGQX END=47401322 GT ./. chr1 47402334 . A . . LowGQX END=47402466 GT ./. chr1 47402947 . G . . LowGQX END=47403047 GT ./. chr1 47403666 . A . . LowGQX END=47403812 GT ./. chr1 47406909 . A . . LowGQX END=47407108 GT ./. chr1 47427254 . T . . LowGQX END=47427429 GT ./. chr1 47489488 . C . . LowGQX END=47489669 GT ./. chr1 47495660 . A . . LowGQX END=47495806 GT ./. chr1 47497081 . T . . LowGQX END=47497181 GT ./. chr1 47498911 . A . . LowGQX END=47499043 GT ./. chr1 47501476 . A . . LowGQX END=47501608 GT ./. chr1 47501687 . A . . LowGQX END=47501846 GT ./. chr1 47504330 . A . . LowGQX END=47504441 GT ./. chr1 47505012 . A . . LowGQX END=47505207 GT ./. chr1 47512137 . A . . LowGQX END=47512275 GT ./. chr1 47514160 . A . . LowGQX END=47514320 GT ./. chr1 47515086 . C . . LowGQX END=47515186 GT ./. chr1 47515670 . A . . LowGQX END=47515849 GT ./. chr1 47533161 . G . . LowGQX END=47533342 GT ./. chr1 47534292 . A . . LowGQX END=47534438 GT ./. chr1 47546208 . A . . LowGQX END=47546368 GT ./. chr1 47548004 . A . . LowGQX END=47548136 GT ./. chr1 47550290 . A . . LowGQX END=47550419 GT ./. chr1 47550494 . A . . LowGQX END=47550684 GT ./. chr1 47560236 . A . . LowGQX END=47560396 GT ./. chr1 47564744 . A . . LowGQX END=47564959 GT ./. chr1 47571798 . A . . LowGQX END=47571936 GT ./. chr1 47581129 . A . . LowGQX END=47581284 GT ./. chr1 47582314 . C . . LowGQX END=47582414 GT ./. chr1 47583436 . A . . LowGQX END=47583609 GT ./. chr1 47603156 . C . . LowGQX END=47603355 GT ./. chr1 47606450 . A . . LowGQX END=47606596 GT ./. chr1 47607216 . C . . LowGQX END=47607316 GT ./. chr1 47607778 . A . . LowGQX END=47607910 GT ./. chr1 47608939 . A . . LowGQX END=47609068 GT ./. chr1 47609432 . A . . LowGQX END=47609591 GT ./. chr1 47610027 . A . . LowGQX END=47610138 GT ./. chr1 47610220 . A . . LowGQX END=47610415 GT ./. chr1 47610456 . G . . LowGQX END=47610645 GT ./. chr1 47611521 . T . . LowGQX END=47611621 GT ./. chr1 47611739 . C . . LowGQX END=47611839 GT ./. chr1 47614272 . A . . LowGQX END=47614472 GT ./. chr1 47649630 . G . . LowGQX END=47649730 GT ./. chr1 47650672 . A . . LowGQX END=47650772 GT ./. chr1 47652989 . A . . LowGQX END=47653102 GT ./. chr1 47655522 . T . . LowGQX END=47655622 GT ./. chr1 47685055 . T . . LowGQX END=47685849 GT ./. chr1 47689674 . A . . LowGQX END=47689777 GT ./. chr1 47691102 . C . . LowGQX END=47691572 GT ./. chr1 47716757 . A . . LowGQX END=47717646 GT ./. chr1 47725910 . T . . LowGQX END=47726253 GT ./. chr1 47728524 . C . . LowGQX END=47728840 GT ./. chr1 47735256 . A . . LowGQX END=47735590 GT ./. chr1 47737697 . G . . LowGQX END=47737965 GT ./. chr1 47745862 . A . . LowGQX END=47746933 GT ./. chr1 47747966 . A . . LowGQX END=47748183 GT ./. chr1 47753172 . T . . LowGQX END=47753384 GT ./. chr1 47755056 . A . . LowGQX END=47755309 GT ./. chr1 47759079 . G . . LowGQX END=47759268 GT ./. chr1 47761386 . T . . LowGQX END=47761572 GT ./. chr1 47765526 . T . . LowGQX END=47765876 GT ./. chr1 47767182 . A . . LowGQX END=47767472 GT ./. chr1 47767855 . C . . LowGQX END=47768070 GT ./. chr1 47770510 . T . . LowGQX END=47770747 GT ./. chr1 47775897 . C . . LowGQX END=47776043 GT ./. chr1 47799616 . G . . LowGQX END=47799791 GT ./. chr1 47823923 . T . . LowGQX END=47824023 GT ./. chr1 47834139 . A . . LowGQX END=47834290 GT ./. chr1 47838625 . A . . LowGQX END=47838782 GT ./. chr1 47840570 . T . . LowGQX END=47840670 GT ./. chr1 47840817 . G . . LowGQX END=47840968 GT ./. chr1 47842347 . A . . LowGQX END=47842447 GT ./. chr1 47881937 . T . . LowGQX END=47882999 GT ./. chr1 47903795 . C . . LowGQX END=47905306 GT ./. chr1 48231502 . G . . LowGQX END=48231842 GT ./. chr1 48240841 . C . . LowGQX END=48241116 GT ./. chr1 48244121 . C . . LowGQX END=48244221 GT ./. chr1 48260257 . C . . LowGQX END=48260303 GT ./. chr1 48260304 . A . . LowGQX END=48260320;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 48260321 . T . . LowGQX . GT ./. chr1 48260322 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 48260323 . C . . LowGQX . GT ./. chr1 48260324 . C . . LowGQX END=48260326;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 48260327 . T . . LowGQX . GT ./. chr1 48260328 . G . . LowGQX END=48260330;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 48260331 . C . . LowGQX END=48260332 GT ./. chr1 48260333 . C . . LowGQX END=48260334;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 48260335 . T . . LowGQX . GT ./. chr1 48260336 . T . . LowGQX END=48260349;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 48260350 . A . . LowGQX . GT ./. chr1 48260351 . G . . LowGQX END=48260353;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 48260354 . C . . LowGQX . GT ./. chr1 48260355 . C . . LowGQX END=48260376;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 48260377 . T . . LowGQX . GT ./. chr1 48260378 . C . . LowGQX END=48260388;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 48260389 . A . . LowGQX . GT ./. chr1 48260390 . C . . LowGQX END=48260393;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 48260394 . C . . LowGQX . GT ./. chr1 48260395 . T . . LowGQX END=48260433;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 48267144 . C . . LowGQX END=48267292 GT ./. chr1 48459705 . C . . LowGQX END=48460270 GT ./. chr1 48462308 . G . . LowGQX END=48462462 GT ./. chr1 48688408 . G . . LowGQX END=48688573 GT ./. chr1 48690382 . T . . LowGQX END=48690482 GT ./. chr1 48694520 . A . . LowGQX END=48694629 GT ./. chr1 48694763 . T . . LowGQX END=48694863 GT ./. chr1 48694965 . A . . LowGQX END=48695134 GT ./. chr1 48696270 . A . . LowGQX END=48696380 GT ./. chr1 48697208 . G . . LowGQX END=48697308 GT ./. chr1 48697616 . A . . LowGQX END=48697826 GT ./. chr1 48698037 . A . . LowGQX END=48698177 GT ./. chr1 48699325 . A . . LowGQX END=48699437 GT ./. chr1 48701399 . A . . LowGQX END=48701554 GT ./. chr1 48703349 . A . . LowGQX END=48703522 GT ./. chr1 48704992 . A . . LowGQX END=48705212 GT ./. chr1 48707604 . C . . LowGQX END=48707704 GT ./. chr1 48708127 . A . . LowGQX END=48708291 GT ./. chr1 48713005 . A . . LowGQX END=48713218 GT ./. chr1 48764383 . T . . LowGQX END=48764568 GT ./. chr1 48771455 . A . . LowGQX END=48771555 GT ./. chr1 48821340 . A . . LowGQX END=48821444 GT ./. chr1 48825256 . A . . LowGQX END=48825445 GT ./. chr1 48850952 . A . . LowGQX END=48851052 GT ./. chr1 48860933 . G . . LowGQX END=48861033 GT ./. chr1 48865021 . A . . LowGQX END=48865319 GT ./. chr1 48866400 . A . . LowGQX END=48866500 GT ./. chr1 48869465 . A . . LowGQX END=48869565 GT ./. chr1 48877134 . A . . LowGQX END=48877263 GT ./. chr1 48878693 . A . . LowGQX END=48878910 GT ./. chr1 48917199 . G . . LowGQX END=48917299 GT ./. chr1 48918664 . A . . LowGQX END=48918806 GT ./. chr1 48937546 . T . . LowGQX END=48937758 GT ./. chr1 48999734 . C . . LowGQX END=48999966 GT ./. chr1 49000525 . T . . LowGQX END=49000625 GT ./. chr1 49005312 . A . . LowGQX END=49005412 GT ./. chr1 49052581 . T . . LowGQX END=49052839 GT ./. chr1 49056504 . C . . LowGQX END=49056658 GT ./. chr1 49100152 . T . . LowGQX END=49100277 GT ./. chr1 49113222 . A . . LowGQX END=49113322 GT ./. chr1 49119008 . C . . LowGQX END=49119124 GT ./. chr1 49128819 . C . . LowGQX END=49128919 GT ./. chr1 49193556 . G . . LowGQX END=49193718 GT ./. chr1 49201909 . A . . LowGQX END=49202127 GT ./. chr1 49208293 . A . . LowGQX END=49208446 GT ./. chr1 49224570 . A . . LowGQX END=49224957 GT ./. chr1 49227008 . C . . LowGQX END=49227143 GT ./. chr1 49242247 . T . . LowGQX END=49242567 GT ./. chr1 49283835 . A . . LowGQX END=49283935 GT ./. chr1 49332833 . A . . LowGQX END=49332933 GT ./. chr1 49511255 . C . . LowGQX END=49511473 GT ./. chr1 49711439 . T . . LowGQX END=49711539 GT ./. chr1 50162949 . C . . LowGQX END=50163110 GT ./. chr1 50317067 . C . . LowGQX END=50317194 GT ./. chr1 50331548 . A . . LowGQX END=50331648 GT ./. chr1 50460707 . C . . LowGQX END=50461032 GT ./. chr1 50489402 . T . . LowGQX END=50489502 GT ./. chr1 50513796 . C . . LowGQX END=50513896 GT ./. chr1 50569618 . C . . LowGQX END=50569718 GT ./. chr1 50571986 . G . . LowGQX END=50572086 GT ./. chr1 50574817 . A . . LowGQX END=50574917 GT ./. chr1 50575575 . G . . LowGQX END=50575675 GT ./. chr1 50610149 . A . . LowGQX END=50610249 GT ./. chr1 50610384 . T . . LowGQX END=50610513 GT ./. chr1 50610627 . A . . LowGQX END=50610872 GT ./. chr1 50642759 . A . . LowGQX END=50642867 GT ./. chr1 50659435 . A . . LowGQX END=50659593 GT ./. chr1 50661231 . A . . LowGQX END=50661461 GT ./. chr1 50663072 . T . . LowGQX END=50663172 GT ./. chr1 50666479 . A . . LowGQX END=50666853 GT ./. chr1 50884336 . C . . LowGQX END=50885407 GT ./. chr1 50886638 . C . . LowGQX END=50887218 GT ./. chr1 50907104 . G . . LowGQX END=50907204 GT ./. chr1 50917758 . C . . LowGQX END=50917866 GT ./. chr1 50941134 . A . . LowGQX END=50941354 GT ./. chr1 50956249 . T . . LowGQX END=50956349 GT ./. chr1 50957384 . C . . LowGQX END=50957484 GT ./. chr1 51001036 . C . . LowGQX END=51001136 GT ./. chr1 51005262 . A . . LowGQX END=51005403 GT ./. chr1 51032747 . A . . LowGQX END=51032906 GT ./. chr1 51048286 . T . . LowGQX END=51048386 GT ./. chr1 51049306 . T . . LowGQX END=51049406 GT ./. chr1 51050355 . A . . LowGQX END=51050486 GT ./. chr1 51061791 . A . . LowGQX END=51061891 GT ./. chr1 51077962 . T . . LowGQX END=51078062 GT ./. chr1 51121052 . T . . LowGQX END=51121208 GT ./. chr1 51171456 . A . . LowGQX END=51171566 GT ./. chr1 51180633 . C . . LowGQX END=51180733 GT ./. chr1 51204531 . T . . LowGQX END=51204631 GT ./. chr1 51210294 . A . . LowGQX END=51210452 GT ./. chr1 51253670 . A . . LowGQX END=51253880 GT ./. chr1 51267277 . T . . LowGQX END=51267377 GT ./. chr1 51323586 . G . . LowGQX END=51323686 GT ./. chr1 51425412 . G . . LowGQX END=51425512 GT ./. chr1 51435990 . A . . LowGQX END=51436221 GT ./. chr1 51439514 . C . . LowGQX END=51439994 GT ./. chr1 51567864 . A . . LowGQX END=51567964 GT ./. chr1 51578135 . G . . LowGQX END=51578242 GT ./. chr1 51584337 . G . . LowGQX END=51584474 GT ./. chr1 51611305 . T . . LowGQX END=51611464 GT ./. chr1 51613138 . G . . LowGQX END=51613444 GT ./. chr1 51702377 . G . . LowGQX END=51702554 GT ./. chr1 51735586 . T . . LowGQX END=51735800 GT ./. chr1 51736821 . A . . LowGQX END=51736997 GT ./. chr1 51753828 . G . . LowGQX END=51753953 GT ./. chr1 51754510 . C . . LowGQX END=51754628 GT ./. chr1 51755676 . C . . LowGQX END=51755792 GT ./. chr1 51756185 . C . . LowGQX END=51756298 GT ./. chr1 51760062 . C . . LowGQX END=51760184 GT ./. chr1 51761719 . C . . LowGQX END=51761843 GT ./. chr1 51767243 . C . . LowGQX END=51767406 GT ./. chr1 51767752 . C . . LowGQX END=51768089 GT ./. chr1 51768162 . A . . LowGQX END=51768262 GT ./. chr1 51768755 . C . . LowGQX END=51768865 GT ./. chr1 51770736 . A . . LowGQX END=51770836 GT ./. chr1 51771648 . C . . LowGQX END=51771749 GT ./. chr1 51774932 . C . . LowGQX END=51775103 GT ./. chr1 51776910 . A . . LowGQX END=51777010 GT ./. chr1 51777779 . T . . LowGQX END=51777879 GT ./. chr1 51778483 . C . . LowGQX END=51778616 GT ./. chr1 51787392 . C . . LowGQX END=51787498 GT ./. chr1 51787762 . A . . LowGQX END=51787862 GT ./. chr1 51796019 . C . . LowGQX END=51796179 GT ./. chr1 51796792 . A . . LowGQX END=51796892 GT ./. chr1 51808665 . T . . LowGQX END=51808765 GT ./. chr1 51810579 . T . . LowGQX END=51810739 GT ./. chr1 51822370 . C . . LowGQX END=51822521 GT ./. chr1 51826841 . A . . LowGQX END=51827030 GT ./. chr1 51829536 . A . . LowGQX END=51829703 GT ./. chr1 51831614 . C . . LowGQX END=51831714 GT ./. chr1 51860037 . T . . LowGQX END=51860137 GT ./. chr1 51864702 . A . . LowGQX END=51864840 GT ./. chr1 51866558 . A . . LowGQX END=51866658 GT ./. chr1 51868103 . T . . LowGQX END=51868203 GT ./. chr1 51869089 . A . . LowGQX END=51869207 GT ./. chr1 51871575 . A . . LowGQX END=51871783 GT ./. chr1 51873805 . A . . LowGQX END=51874007 GT ./. chr1 51875205 . A . . LowGQX END=51875395 GT ./. chr1 51887456 . A . . LowGQX END=51887629 GT ./. chr1 51888865 . A . . LowGQX END=51888965 GT ./. chr1 51906012 . T . . LowGQX END=51906112 GT ./. chr1 51910559 . A . . LowGQX END=51910720 GT ./. chr1 51912630 . A . . LowGQX END=51912780 GT ./. chr1 51913713 . C . . LowGQX END=51913813 GT ./. chr1 51924151 . G . . LowGQX END=51924406 GT ./. chr1 51926743 . A . . LowGQX END=51926843 GT ./. chr1 51929343 . A . . LowGQX END=51929473 GT ./. chr1 51930916 . T . . LowGQX END=51931016 GT ./. chr1 51934083 . C . . LowGQX END=51934243 GT ./. chr1 51937336 . A . . LowGQX END=51937436 GT ./. chr1 51938526 . A . . LowGQX END=51938626 GT ./. chr1 51946863 . C . . LowGQX END=51947016 GT ./. chr1 51955891 . C . . LowGQX END=51956051 GT ./. chr1 51984778 . C . . LowGQX END=51984938 GT ./. chr1 52082728 . A . . LowGQX END=52082896 GT ./. chr1 52117581 . T . . LowGQX END=52117739 GT ./. chr1 52135104 . A . . LowGQX END=52135292 GT ./. chr1 52135418 . T . . LowGQX END=52135518 GT ./. chr1 52179664 . T . . LowGQX END=52179764 GT ./. chr1 52195551 . G . . LowGQX END=52195711 GT ./. chr1 52205739 . T . . LowGQX END=52205899 GT ./. chr1 52211155 . T . . LowGQX END=52211306 GT ./. chr1 52212356 . T . . LowGQX END=52212456 GT ./. chr1 52213949 . T . . LowGQX END=52214106 GT ./. chr1 52215142 . A . . LowGQX END=52215242 GT ./. chr1 52215793 . A . . LowGQX END=52215893 GT ./. chr1 52218163 . T . . LowGQX END=52218263 GT ./. chr1 52221966 . T . . LowGQX END=52222066 GT ./. chr1 52226299 . T . . LowGQX END=52226458 GT ./. chr1 52227537 . A . . LowGQX END=52227646 GT ./. chr1 52231492 . A . . LowGQX END=52231656 GT ./. chr1 52237740 . A . . LowGQX END=52237857 GT ./. chr1 52238275 . A . . LowGQX END=52238398 GT ./. chr1 52242498 . T . . LowGQX END=52242598 GT ./. chr1 52246834 . A . . LowGQX END=52247010 GT ./. chr1 52248224 . C . . LowGQX END=52248324 GT ./. chr1 52249585 . A . . LowGQX END=52249700 GT ./. chr1 52249918 . T . . LowGQX END=52250018 GT ./. chr1 52250112 . A . . LowGQX END=52250257 GT ./. chr1 52251407 . G . . LowGQX END=52251628 GT ./. chr1 52252194 . C . . LowGQX END=52252294 GT ./. chr1 52253023 . A . . LowGQX END=52253163 GT ./. chr1 52253375 . T . . LowGQX END=52253475 GT ./. chr1 52254906 . A . . LowGQX END=52255108 GT ./. chr1 52255235 . C . . LowGQX END=52255335 GT ./. chr1 52256203 . A . . LowGQX END=52256324 GT ./. chr1 52256568 . T . . LowGQX END=52256668 GT ./. chr1 52257242 . T . . LowGQX END=52257342 GT ./. chr1 52257695 . A . . LowGQX END=52257795 GT ./. chr1 52258023 . C . . LowGQX END=52258123 GT ./. chr1 52260140 . T . . LowGQX END=52260285 GT ./. chr1 52260461 . C . . LowGQX END=52260561 GT ./. chr1 52260813 . C . . LowGQX END=52260913 GT ./. chr1 52263919 . A . . LowGQX END=52264086 GT ./. chr1 52266226 . A . . LowGQX END=52266358 GT ./. chr1 52269484 . A . . LowGQX END=52269639 GT ./. chr1 52271158 . C . . LowGQX END=52271310 GT ./. chr1 52272464 . A . . LowGQX END=52272588 GT ./. chr1 52274981 . A . . LowGQX END=52275081 GT ./. chr1 52275951 . A . . LowGQX END=52276079 GT ./. chr1 52277664 . A . . LowGQX END=52277773 GT ./. chr1 52279685 . A . . LowGQX END=52279785 GT ./. chr1 52280203 . T . . LowGQX END=52280303 GT ./. chr1 52280363 . A . . LowGQX END=52280488 GT ./. chr1 52281973 . T . . LowGQX END=52282073 GT ./. chr1 52283666 . A . . LowGQX END=52283823 GT ./. chr1 52285459 . T . . LowGQX END=52285559 GT ./. chr1 52287149 . G . . LowGQX END=52287249 GT ./. chr1 52289334 . A . . LowGQX END=52289461 GT ./. chr1 52290906 . T . . LowGQX END=52291117 GT ./. chr1 52293455 . G . . LowGQX END=52293555 GT ./. chr1 52299687 . A . . LowGQX END=52299845 GT ./. chr1 52301794 . A . . LowGQX END=52301894 GT ./. chr1 52302026 . C . . LowGQX END=52302126 GT ./. chr1 52303157 . A . . LowGQX END=52303295 GT ./. chr1 52305896 . A . . LowGQX END=52306189 GT ./. chr1 52343945 . A . . LowGQX END=52344290 GT ./. chr1 52385597 . G . . LowGQX END=52385789 GT ./. chr1 52398988 . A . . LowGQX END=52399117 GT ./. chr1 52402914 . T . . LowGQX END=52403087 GT ./. chr1 52442560 . A . . LowGQX END=52442792 GT ./. chr1 52486595 . C . . LowGQX END=52486695 GT ./. chr1 52489155 . A . . LowGQX END=52489255 GT ./. chr1 52490167 . G . . LowGQX END=52490267 GT ./. chr1 52492934 . C . . LowGQX END=52493034 GT ./. chr1 52494227 . T . . LowGQX END=52494378 GT ./. chr1 52498367 . G . . LowGQX END=52499436 GT ./. chr1 52507190 . C . . LowGQX END=52507290 GT ./. chr1 52520670 . A . . LowGQX END=52520771 GT ./. chr1 52525497 . C . . LowGQX END=52525597 GT ./. chr1 52526100 . G . . LowGQX END=52526208 GT ./. chr1 52530495 . A . . LowGQX END=52530613 GT ./. chr1 52549010 . A . . LowGQX END=52549216 GT ./. chr1 52551767 . A . . LowGQX END=52551867 GT ./. chr1 52552358 . T . . LowGQX END=52552458 GT ./. chr1 52698864 . G . . LowGQX END=52698964 GT ./. chr1 52703158 . A . . LowGQX END=52705270 GT ./. chr1 52729443 . A . . LowGQX END=52729558 GT ./. chr1 52732325 . A . . LowGQX END=52732506 GT ./. chr1 52734133 . A . . LowGQX END=52734307 GT ./. chr1 52740134 . A . . LowGQX END=52740259 GT ./. chr1 52744112 . T . . LowGQX END=52744289 GT ./. chr1 52747331 . A . . LowGQX END=52747521 GT ./. chr1 52759123 . A . . LowGQX END=52759352 GT ./. chr1 52761559 . T . . LowGQX END=52761659 GT ./. chr1 52769491 . A . . LowGQX END=52769600 GT ./. chr1 52798438 . A . . LowGQX END=52798628 GT ./. chr1 52800351 . C . . LowGQX END=52800451 GT ./. chr1 52803442 . A . . LowGQX END=52803609 GT ./. chr1 52805746 . G . . LowGQX END=52805906 GT ./. chr1 52810438 . A . . LowGQX END=52810619 GT ./. chr1 52811730 . A . . LowGQX END=52811896 GT ./. chr1 52818800 . A . . LowGQX END=52818900 GT ./. chr1 52819189 . C . . LowGQX END=52819322 GT ./. chr1 52820041 . G . . LowGQX END=52820141 GT ./. chr1 52820276 . C . . LowGQX END=52820376 GT ./. chr1 52820510 . A . . LowGQX END=52820614 GT ./. chr1 52821046 . A . . LowGQX END=52821146 GT ./. chr1 52821260 . T . . LowGQX END=52821360 GT ./. chr1 52821430 . G . . LowGQX END=52821530 GT ./. chr1 52821856 . A . . LowGQX END=52821977 GT ./. chr1 52822036 . G . . LowGQX END=52822136 GT ./. chr1 52822671 . A . . LowGQX END=52822841 GT ./. chr1 52823196 . A . . LowGQX END=52823373 GT ./. chr1 52823451 . A . . LowGQX END=52823591 GT ./. chr1 52824001 . A . . LowGQX END=52824136 GT ./. chr1 52824286 . C . . LowGQX END=52824445 GT ./. chr1 52824697 . A . . LowGQX END=52824832 GT ./. chr1 52824866 . G . . LowGQX END=52825032 GT ./. chr1 52825059 . G . . LowGQX END=52825219 GT ./. chr1 52825375 . A . . LowGQX END=52825558 GT ./. chr1 52825744 . A . . LowGQX END=52825928 GT ./. chr1 52826094 . A . . LowGQX END=52826224 GT ./. chr1 52826644 . A . . LowGQX END=52826807 GT ./. chr1 52827183 . A . . LowGQX END=52827291 GT ./. chr1 52828272 . A . . LowGQX END=52828421 GT ./. chr1 52830209 . G . . LowGQX END=52830309 GT ./. chr1 52838802 . T . . LowGQX END=52839099 GT ./. chr1 52840431 . T . . LowGQX END=52840621 GT ./. chr1 52841051 . A . . LowGQX END=52841323 GT ./. chr1 52847263 . G . . LowGQX END=52847485 GT ./. chr1 52849041 . G . . LowGQX END=52849293 GT ./. chr1 52849451 . C . . LowGQX END=52849661 GT ./. chr1 52850171 . T . . LowGQX END=52850445 GT ./. chr1 52850782 . C . . LowGQX END=52850986 GT ./. chr1 52851473 . A . . LowGQX END=52851673 GT ./. chr1 52854063 . T . . LowGQX END=52854361 GT ./. chr1 52854838 . G . . LowGQX END=52855045 GT ./. chr1 52859064 . C . . LowGQX END=52859527 GT ./. chr1 52861667 . C . . LowGQX END=52862088 GT ./. chr1 52863306 . G . . LowGQX END=52863587 GT ./. chr1 52866983 . T . . LowGQX END=52867213 GT ./. chr1 52867750 . T . . LowGQX END=52867947 GT ./. chr1 52870420 . A . . LowGQX END=52870554 GT ./. chr1 52871350 . A . . LowGQX END=52871514 GT ./. chr1 52874017 . A . . LowGQX END=52874133 GT ./. chr1 52874239 . A . . LowGQX END=52874365 GT ./. chr1 52876780 . C . . LowGQX END=52876880 GT ./. chr1 52878184 . A . . LowGQX END=52878299 GT ./. chr1 52879549 . A . . LowGQX END=52879666 GT ./. chr1 52880257 . C . . LowGQX END=52880357 GT ./. chr1 52880432 . A . . LowGQX END=52880534 GT ./. chr1 52880985 . T . . LowGQX END=52881085 GT ./. chr1 52882318 . A . . LowGQX END=52882433 GT ./. chr1 52889493 . A . . LowGQX END=52889691 GT ./. chr1 52891019 . A . . LowGQX END=52891182 GT ./. chr1 52896683 . A . . LowGQX END=52897135 GT ./. chr1 52901035 . A . . LowGQX END=52901140 GT ./. chr1 52902425 . A . . LowGQX END=52902653 GT ./. chr1 52903890 . A . . LowGQX END=52904010 GT ./. chr1 52911451 . A . . LowGQX END=52911551 GT ./. chr1 52911603 . A . . LowGQX END=52911703 GT ./. chr1 52911935 . A . . LowGQX END=52912117 GT ./. chr1 52912251 . T . . LowGQX END=52912351 GT ./. chr1 52924006 . A . . LowGQX END=52924124 GT ./. chr1 52926801 . A . . LowGQX END=52926901 GT ./. chr1 52927183 . A . . LowGQX END=52927291 GT ./. chr1 52927363 . G . . LowGQX END=52927463 GT ./. chr1 52929352 . T . . LowGQX END=52929452 GT ./. chr1 52930740 . A . . LowGQX END=52930848 GT ./. chr1 52933791 . A . . LowGQX END=52933947 GT ./. chr1 52937622 . A . . LowGQX END=52937812 GT ./. chr1 52940502 . A . . LowGQX END=52941210 GT ./. chr1 52943378 . A . . LowGQX END=52943557 GT ./. chr1 52947093 . A . . LowGQX END=52947310 GT ./. chr1 52947474 . A . . LowGQX END=52947598 GT ./. chr1 52954579 . A . . LowGQX END=52954710 GT ./. chr1 52956389 . T . . LowGQX END=52956489 GT ./. chr1 52959199 . T . . LowGQX END=52959411 GT ./. chr1 52961094 . C . . LowGQX END=52961194 GT ./. chr1 52962656 . C . . LowGQX END=52962858 GT ./. chr1 52975266 . A . . LowGQX END=52975446 GT ./. chr1 52981514 . G . . LowGQX END=52981729 GT ./. chr1 52991233 . A . . LowGQX END=52991955 GT ./. chr1 53068049 . G . . LowGQX END=53068260 GT ./. chr1 53072354 . A . . LowGQX END=53072620 GT ./. chr1 53073932 . A . . LowGQX END=53074100 GT ./. chr1 53099144 . G . . LowGQX END=53099364 GT ./. chr1 53108533 . A . . LowGQX END=53108677 GT ./. chr1 53122460 . A . . LowGQX END=53122715 GT ./. chr1 53153390 . C . . LowGQX END=53153843 GT ./. chr1 53158397 . A . . LowGQX END=53158542 GT ./. chr1 53163891 . A . . LowGQX END=53164001 GT ./. chr1 53192231 . C . . LowGQX END=53192391 GT ./. chr1 53222128 . A . . LowGQX END=53222298 GT ./. chr1 53236690 . A . . LowGQX END=53237449 GT ./. chr1 53245523 . A . . LowGQX END=53245668 GT ./. chr1 53250517 . G . . LowGQX END=53250728 GT ./. chr1 53255658 . T . . LowGQX END=53255758 GT ./. chr1 53261962 . A . . LowGQX END=53262066 GT ./. chr1 53262382 . A . . LowGQX END=53262482 GT ./. chr1 53267489 . A . . LowGQX END=53267655 GT ./. chr1 53267738 . T . . LowGQX END=53267838 GT ./. chr1 53271096 . A . . LowGQX END=53271196 GT ./. chr1 53279206 . A . . LowGQX END=53279408 GT ./. chr1 53279509 . C . . LowGQX END=53279609 GT ./. chr1 53282202 . A . . LowGQX END=53282362 GT ./. chr1 53287109 . A . . LowGQX END=53287304 GT ./. chr1 53308495 . C . . LowGQX END=53308651 GT ./. chr1 53320136 . G . . LowGQX END=53320303 GT ./. chr1 53322669 . G . . LowGQX END=53323422 GT ./. chr1 53326402 . G . . LowGQX END=53326544 GT ./. chr1 53329652 . G . . LowGQX END=53329830 GT ./. chr1 53332157 . T . . LowGQX END=53332257 GT ./. chr1 53333210 . G . . LowGQX END=53333311 GT ./. chr1 53333374 . C . . LowGQX END=53333474 GT ./. chr1 53343353 . G . . LowGQX END=53343516 GT ./. chr1 53343569 . A . . LowGQX END=53343669 GT ./. chr1 53347142 . G . . LowGQX END=53347338 GT ./. chr1 53351486 . T . . LowGQX END=53351586 GT ./. chr1 53352627 . G . . LowGQX END=53352727 GT ./. chr1 53358453 . G . . LowGQX END=53358630 GT ./. chr1 53362181 . T . . LowGQX END=53362281 GT ./. chr1 53363083 . G . . LowGQX END=53363183 GT ./. chr1 53364762 . C . . LowGQX END=53364922 GT ./. chr1 53370316 . A . . LowGQX END=53370508 GT ./. chr1 53370685 . G . . LowGQX END=53370785 GT ./. chr1 53372054 . G . . LowGQX END=53372284 GT ./. chr1 53373534 . C . . LowGQX END=53373634 GT ./. chr1 53377232 . A . . LowGQX END=53377332 GT ./. chr1 53377379 . G . . LowGQX END=53377479 GT ./. chr1 53379705 . A . . LowGQX END=53379805 GT ./. chr1 53380904 . T . . LowGQX END=53381004 GT ./. chr1 53383234 . G . . LowGQX END=53383334 GT ./. chr1 53387155 . C . . LowGQX END=53387348 GT ./. chr1 53393018 . A . . LowGQX END=53393189 GT ./. chr1 53407417 . A . . LowGQX END=53407577 GT ./. chr1 53413630 . C . . LowGQX END=53413804 GT ./. chr1 53416376 . G . . LowGQX END=53416610 GT ./. chr1 53420361 . T . . LowGQX END=53420528 GT ./. chr1 53427124 . A . . LowGQX END=53427353 GT ./. chr1 53440383 . T . . LowGQX END=53440556 GT ./. chr1 53442304 . A . . LowGQX END=53442493 GT ./. chr1 53443838 . C . . LowGQX END=53444091 GT ./. chr1 53446017 . T . . LowGQX END=53446267 GT ./. chr1 53453650 . T . . LowGQX END=53453860 GT ./. chr1 53458850 . G . . LowGQX END=53459001 GT ./. chr1 53480511 . G . . LowGQX END=53480767 GT ./. chr1 53493590 . A . . LowGQX END=53493795 GT ./. chr1 53504538 . A . . LowGQX END=53504770 GT ./. chr1 53513479 . T . . LowGQX END=53513675 GT ./. chr1 53516230 . A . . LowGQX END=53516428 GT ./. chr1 53527887 . C . . LowGQX END=53528039 GT ./. chr1 53532474 . A . . LowGQX END=53532574 GT ./. chr1 53535461 . T . . LowGQX END=53535851 GT ./. chr1 53537204 . T . . LowGQX END=53537304 GT ./. chr1 53540261 . A . . LowGQX END=53540361 GT ./. chr1 53541532 . A . . LowGQX END=53541646 GT ./. chr1 53542860 . A . . LowGQX END=53543021 GT ./. chr1 53543355 . A . . LowGQX END=53543475 GT ./. chr1 53544035 . A . . LowGQX END=53544697 GT ./. chr1 53546398 . A . . LowGQX END=53546551 GT ./. chr1 53547651 . A . . LowGQX END=53547836 GT ./. chr1 53553679 . G . . LowGQX END=53553919 GT ./. chr1 53554547 . A . . LowGQX END=53554654 GT ./. chr1 53555470 . A . . LowGQX END=53555792 GT ./. chr1 53556282 . A . . LowGQX END=53556656 GT ./. chr1 53558224 . A . . LowGQX END=53558462 GT ./. chr1 53559131 . A . . LowGQX END=53559235 GT ./. chr1 53569016 . A . . LowGQX END=53569243 GT ./. chr1 53571322 . C . . LowGQX END=53571476 GT ./. chr1 53574234 . C . . LowGQX END=53574334 GT ./. chr1 53580428 . A . . LowGQX END=53580648 GT ./. chr1 53600012 . C . . LowGQX END=53600112 GT ./. chr1 53607985 . A . . LowGQX END=53608124 GT ./. chr1 53662505 . C . . LowGQX END=53662875 GT ./. chr1 53666340 . T . . LowGQX END=53666523 GT ./. chr1 53667944 . A . . LowGQX END=53668153 GT ./. chr1 53675636 . T . . LowGQX END=53677043 GT ./. chr1 53678885 . T . . LowGQX END=53679319 GT ./. chr1 53680320 . A . . LowGQX END=53680420 GT ./. chr1 53681646 . G . . LowGQX END=53681746 GT ./. chr1 53682443 . T . . LowGQX END=53682543 GT ./. chr1 53683810 . C . . LowGQX END=53683910 GT ./. chr1 53684077 . C . . LowGQX END=53684177 GT ./. chr1 53684518 . G . . LowGQX END=53684618 GT ./. chr1 53685925 . G . . LowGQX END=53686025 GT ./. chr1 53686135 . C . . LowGQX END=53686295 GT ./. chr1 53692665 . A . . LowGQX END=53692819 GT ./. chr1 53694482 . A . . LowGQX END=53694636 GT ./. chr1 53699212 . A . . LowGQX END=53699327 GT ./. chr1 53701229 . A . . LowGQX END=53701329 GT ./. chr1 53704027 . T . . LowGQX END=53704127 GT ./. chr1 53712598 . A . . LowGQX END=53712760 GT ./. chr1 53715050 . A . . LowGQX END=53715231 GT ./. chr1 53716360 . A . . LowGQX END=53716537 GT ./. chr1 53720774 . G . . LowGQX END=53720874 GT ./. chr1 53722910 . A . . LowGQX END=53723139 GT ./. chr1 53723989 . A . . LowGQX END=53724146 GT ./. chr1 53726134 . A . . LowGQX END=53726280 GT ./. chr1 53727738 . A . . LowGQX END=53727882 GT ./. chr1 53728116 . A . . LowGQX END=53728239 GT ./. chr1 53729839 . A . . LowGQX END=53730071 GT ./. chr1 53732143 . A . . LowGQX END=53732327 GT ./. chr1 53736698 . A . . LowGQX END=53736828 GT ./. chr1 53736897 . A . . LowGQX END=53737021 GT ./. chr1 53738246 . T . . LowGQX END=53738346 GT ./. chr1 53740372 . C . . LowGQX END=53740493 GT ./. chr1 53741301 . A . . LowGQX END=53741428 GT ./. chr1 53742351 . G . . LowGQX END=53742761 GT ./. chr1 53746257 . A . . LowGQX END=53746390 GT ./. chr1 53755237 . A . . LowGQX END=53755364 GT ./. chr1 53792543 . A . . LowGQX END=53792667 GT ./. chr1 53793418 . G . . LowGQX END=53793587 GT ./. chr1 53925115 . C . . LowGQX END=53925712 GT ./. chr1 53927144 . A . . LowGQX END=53927321 GT ./. chr1 53930237 . G . . LowGQX END=53930587 GT ./. chr1 53932252 . T . . LowGQX END=53932352 GT ./. chr1 53972290 . C . . LowGQX END=53972452 GT ./. chr1 53974791 . A . . LowGQX END=53974963 GT ./. chr1 53975509 . G . . LowGQX END=53975720 GT ./. chr1 53980275 . G . . LowGQX END=53980457 GT ./. chr1 53986305 . A . . LowGQX END=53986442 GT ./. chr1 53990448 . A . . LowGQX END=53990563 GT ./. chr1 53995462 . A . . LowGQX END=53995628 GT ./. chr1 54059779 . A . . LowGQX END=54060578 GT ./. chr1 54233625 . A . . LowGQX END=54233725 GT ./. chr1 54238000 . A . . LowGQX END=54238165 GT ./. chr1 54252829 . A . . LowGQX END=54252934 GT ./. chr1 54254734 . C . . LowGQX END=54254888 GT ./. chr1 54258878 . A . . LowGQX END=54258978 GT ./. chr1 54262360 . A . . LowGQX END=54262480 GT ./. chr1 54262570 . A . . LowGQX END=54262820 GT ./. chr1 54266334 . T . . LowGQX END=54266524 GT ./. chr1 54269592 . T . . LowGQX END=54269692 GT ./. chr1 54272036 . A . . LowGQX END=54272195 GT ./. chr1 54273327 . A . . LowGQX END=54273467 GT ./. chr1 54275344 . T . . LowGQX END=54275444 GT ./. chr1 54284642 . A . . LowGQX END=54284802 GT ./. chr1 54291469 . A . . LowGQX END=54291659 GT ./. chr1 54293670 . A . . LowGQX END=54293849 GT ./. chr1 54298161 . A . . LowGQX END=54298267 GT ./. chr1 54301171 . A . . LowGQX END=54301296 GT ./. chr1 54303797 . C . . LowGQX END=54303957 GT ./. chr1 54325732 . C . . LowGQX END=54325832 GT ./. chr1 54331871 . A . . LowGQX END=54332058 GT ./. chr1 54332428 . T . . LowGQX END=54332600 GT ./. chr1 54337043 . A . . LowGQX END=54337164 GT ./. chr1 54343982 . A . . LowGQX END=54344082 GT ./. chr1 54344253 . C . . LowGQX END=54344406 GT ./. chr1 54348784 . A . . LowGQX END=54348952 GT ./. chr1 54354569 . A . . LowGQX END=54354669 GT ./. chr1 54356187 . A . . LowGQX END=54356287 GT ./. chr1 54359882 . A . . LowGQX END=54360004 GT ./. chr1 54360005 . T . . LowGQX END=54360153;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 54360154 . C . . LowGQX END=54360195 GT ./. chr1 54360196 . T . . LowGQX END=54360223;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 54370337 . A . . LowGQX END=54370485 GT ./. chr1 54371766 . A . . LowGQX END=54371970 GT ./. chr1 54375589 . T . . LowGQX END=54375689 GT ./. chr1 54387322 . C . . LowGQX END=54387443 GT ./. chr1 54389485 . A . . LowGQX END=54389639 GT ./. chr1 54394030 . T . . LowGQX END=54394130 GT ./. chr1 54395691 . A . . LowGQX END=54395861 GT ./. chr1 54405596 . T . . LowGQX END=54405758 GT ./. chr1 54417671 . C . . LowGQX END=54418148 GT ./. chr1 54423820 . A . . LowGQX END=54423956 GT ./. chr1 54426027 . A . . LowGQX END=54426150 GT ./. chr1 54427702 . T . . LowGQX END=54427802 GT ./. chr1 54427967 . A . . LowGQX END=54428085 GT ./. chr1 54431962 . G . . LowGQX END=54431976 GT ./. chr1 54431977 . G . . LowGQX END=54432041;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 54432042 . C . . LowGQX END=54432062 GT ./. chr1 54433336 . A . . LowGQX END=54433615 GT ./. chr1 54474653 . A . . LowGQX END=54474806 GT ./. chr1 54475953 . A . . LowGQX END=54476086 GT ./. chr1 54477814 . A . . LowGQX END=54477956 GT ./. chr1 54479907 . A . . LowGQX END=54480040 GT ./. chr1 54483025 . G . . LowGQX END=54483125 GT ./. chr1 54483697 . C . . LowGQX END=54483857 GT ./. chr1 54497821 . G . . LowGQX END=54497981 GT ./. chr1 54502272 . A . . LowGQX END=54502394 GT ./. chr1 54506421 . A . . LowGQX END=54506521 GT ./. chr1 54507388 . A . . LowGQX END=54507488 GT ./. chr1 54509044 . A . . LowGQX END=54509201 GT ./. chr1 54511316 . G . . LowGQX END=54511462 GT ./. chr1 54512938 . A . . LowGQX END=54513098 GT ./. chr1 54514289 . A . . LowGQX END=54514389 GT ./. chr1 54518671 . A . . LowGQX END=54518864 GT ./. chr1 54520005 . C . . LowGQX END=54520200 GT ./. chr1 54534427 . A . . LowGQX END=54534573 GT ./. chr1 54554258 . T . . LowGQX END=54554466 GT ./. chr1 54561956 . A . . LowGQX END=54562149 GT ./. chr1 54570140 . A . . LowGQX END=54570534 GT ./. chr1 54605180 . A . . LowGQX END=54605790 GT ./. chr1 54606769 . A . . LowGQX END=54607109 GT ./. chr1 54610137 . A . . LowGQX END=54610489 GT ./. chr1 54618507 . G . . LowGQX END=54618607 GT ./. chr1 54636763 . C . . LowGQX END=54637145 GT ./. chr1 54640291 . G . . LowGQX END=54640496 GT ./. chr1 54641263 . A . . LowGQX END=54641363 GT ./. chr1 54644821 . C . . LowGQX END=54645026 GT ./. chr1 54645586 . C . . LowGQX END=54645936 GT ./. chr1 54649833 . C . . LowGQX END=54649939 GT ./. chr1 54653319 . A . . LowGQX END=54653419 GT ./. chr1 54656350 . G . . LowGQX END=54656570 GT ./. chr1 54661091 . C . . LowGQX END=54661290 GT ./. chr1 54665915 . G . . LowGQX END=54666265 GT ./. chr1 54670689 . A . . LowGQX END=54670877 GT ./. chr1 54670966 . A . . LowGQX END=54671086 GT ./. chr1 54675617 . A . . LowGQX END=54675807 GT ./. chr1 54678172 . A . . LowGQX END=54678334 GT ./. chr1 54681812 . A . . LowGQX END=54682020 GT ./. chr1 54683834 . G . . LowGQX END=54683934 GT ./. chr1 54686283 . G . . LowGQX END=54686530 GT ./. chr1 54692709 . C . . LowGQX END=54692869 GT ./. chr1 54693926 . A . . LowGQX END=54694032 GT ./. chr1 54694087 . T . . LowGQX END=54694187 GT ./. chr1 54694411 . G . . LowGQX END=54694511 GT ./. chr1 54703739 . G . . LowGQX END=54704043 GT ./. chr1 54704754 . T . . LowGQX END=54704875 GT ./. chr1 54706496 . A . . LowGQX END=54706656 GT ./. chr1 54707115 . A . . LowGQX END=54707215 GT ./. chr1 54707812 . C . . LowGQX END=54707912 GT ./. chr1 54708891 . G . . LowGQX END=54708991 GT ./. chr1 54717227 . G . . LowGQX END=54717378 GT ./. chr1 54717451 . A . . LowGQX END=54717551 GT ./. chr1 54722728 . T . . LowGQX END=54722880 GT ./. chr1 54723673 . C . . LowGQX END=54723833 GT ./. chr1 54747106 . C . . LowGQX END=54747258 GT ./. chr1 54867527 . T . . LowGQX END=54867627 GT ./. chr1 54870230 . A . . LowGQX END=54870330 GT ./. chr1 54870518 . G . . LowGQX END=54870618 GT ./. chr1 54871544 . C . . LowGQX END=54871704 GT ./. chr1 55013890 . C . . LowGQX END=55014050 GT ./. chr1 55050326 . A . . LowGQX END=55050538 GT ./. chr1 55051493 . T . . LowGQX END=55051593 GT ./. chr1 55058200 . C . . LowGQX END=55058300 GT ./. chr1 55059612 . A . . LowGQX END=55059715 GT ./. chr1 55060227 . A . . LowGQX END=55060367 GT ./. chr1 55062900 . C . . LowGQX END=55063093 GT ./. chr1 55064967 . A . . LowGQX END=55065091 GT ./. chr1 55066940 . A . . LowGQX END=55067089 GT ./. chr1 55068320 . C . . LowGQX END=55068420 GT ./. chr1 55069528 . C . . LowGQX END=55069628 GT ./. chr1 55070011 . T . . LowGQX END=55070111 GT ./. chr1 55070747 . A . . LowGQX END=55070885 GT ./. chr1 55072805 . A . . LowGQX END=55072941 GT ./. chr1 55073613 . A . . LowGQX END=55073744 GT ./. chr1 55074628 . A . . LowGQX END=55074788 GT ./. chr1 55074939 . G . . LowGQX END=55075617 GT ./. chr1 55076083 . A . . LowGQX END=55076231 GT ./. chr1 55077277 . A . . LowGQX END=55077421 GT ./. chr1 55078157 . A . . LowGQX END=55078386 GT ./. chr1 55080371 . A . . LowGQX END=55080535 GT ./. chr1 55081661 . G . . LowGQX END=55081848 GT ./. chr1 55085535 . A . . LowGQX END=55085683 GT ./. chr1 55088949 . A . . LowGQX END=55089071 GT ./. chr1 55096405 . A . . LowGQX END=55096562 GT ./. chr1 55100332 . G . . LowGQX END=55100432 GT ./. chr1 55118598 . A . . LowGQX END=55119833 GT ./. chr1 55124716 . T . . LowGQX END=55124875 GT ./. chr1 55129400 . C . . LowGQX END=55129500 GT ./. chr1 55130827 . T . . LowGQX END=55130927 GT ./. chr1 55134519 . T . . LowGQX END=55134619 GT ./. chr1 55136160 . C . . LowGQX END=55136260 GT ./. chr1 55136471 . A . . LowGQX END=55136605 GT ./. chr1 55138762 . A . . LowGQX END=55138862 GT ./. chr1 55139372 . A . . LowGQX END=55139481 GT ./. chr1 55139672 . G . . LowGQX END=55139827 GT ./. chr1 55144413 . A . . LowGQX END=55144530 GT ./. chr1 55144884 . C . . LowGQX END=55145115 GT ./. chr1 55145562 . A . . LowGQX END=55145721 GT ./. chr1 55148327 . A . . LowGQX END=55148470 GT ./. chr1 55151929 . A . . LowGQX END=55152124 GT ./. chr1 55158095 . A . . LowGQX END=55158237 GT ./. chr1 55161047 . A . . LowGQX END=55161284 GT ./. chr1 55163295 . C . . LowGQX END=55163395 GT ./. chr1 55165741 . G . . LowGQX END=55166137 GT ./. chr1 55166794 . C . . LowGQX END=55166998 GT ./. chr1 55167761 . A . . LowGQX END=55167921 GT ./. chr1 55168294 . A . . LowGQX END=55168421 GT ./. chr1 55172106 . A . . LowGQX END=55172213 GT ./. chr1 55174669 . T . . LowGQX END=55174769 GT ./. chr1 55175617 . A . . LowGQX END=55175863 GT ./. chr1 55181190 . C . . LowGQX END=55181290 GT ./. chr1 55181580 . C . . LowGQX END=55181817 GT ./. chr1 55182271 . A . . LowGQX END=55182393 GT ./. chr1 55183163 . A . . LowGQX END=55183329 GT ./. chr1 55186825 . T . . LowGQX END=55186925 GT ./. chr1 55188346 . A . . LowGQX END=55188475 GT ./. chr1 55194013 . T . . LowGQX END=55194113 GT ./. chr1 55197157 . A . . LowGQX END=55197376 GT ./. chr1 55199293 . T . . LowGQX END=55199393 GT ./. chr1 55203247 . T . . LowGQX END=55203347 GT ./. chr1 55207032 . G . . LowGQX END=55207189 GT ./. chr1 55223405 . A . . LowGQX END=55224837 GT ./. chr1 55246904 . G . . LowGQX END=55247453 GT ./. chr1 55247997 . C . . LowGQX END=55248151 GT ./. chr1 55250403 . G . . LowGQX END=55250550 GT ./. chr1 55251167 . G . . LowGQX END=55251318 GT ./. chr1 55251654 . A . . LowGQX END=55251820 GT ./. chr1 55252628 . A . . LowGQX END=55252751 GT ./. chr1 55253341 . A . . LowGQX END=55253502 GT ./. chr1 55253693 . C . . LowGQX END=55253793 GT ./. chr1 55266268 . A . . LowGQX END=55266848 GT ./. chr1 55271737 . C . . LowGQX END=55271948 GT ./. chr1 55272663 . C . . LowGQX END=55272763 GT ./. chr1 55273197 . A . . LowGQX END=55273366 GT ./. chr1 55273560 . A . . LowGQX END=55273687 GT ./. chr1 55277465 . A . . LowGQX END=55277607 GT ./. chr1 55277717 . A . . LowGQX END=55277865 GT ./. chr1 55279485 . A . . LowGQX END=55279651 GT ./. chr1 55280585 . A . . LowGQX END=55280715 GT ./. chr1 55282660 . A . . LowGQX END=55282798 GT ./. chr1 55307270 . G . . LowGQX END=55307370 GT ./. chr1 55307460 . C . . LowGQX END=55307560 GT ./. chr1 55317855 . G . . LowGQX END=55318111 GT ./. chr1 55319056 . T . . LowGQX END=55319337 GT ./. chr1 55319659 . G . . LowGQX END=55319959 GT ./. chr1 55330925 . C . . LowGQX END=55331171 GT ./. chr1 55336972 . A . . LowGQX END=55337338 GT ./. chr1 55340715 . C . . LowGQX END=55340936 GT ./. chr1 55341564 . C . . LowGQX END=55341772 GT ./. chr1 55349240 . C . . LowGQX END=55349498 GT ./. chr1 55352235 . C . . LowGQX END=55352399 GT ./. chr1 55352511 . C . . LowGQX END=55352844 GT ./. chr1 55446697 . G . . LowGQX END=55446797 GT ./. chr1 55451768 . A . . LowGQX END=55452122 GT ./. chr1 55457507 . A . . LowGQX END=55457779 GT ./. chr1 55464809 . C . . LowGQX END=55465088 GT ./. chr1 55470644 . G . . LowGQX END=55470841 GT ./. chr1 55472619 . G . . LowGQX END=55472997 GT ./. chr1 55473836 . A . . LowGQX END=55474353 GT ./. chr1 55505460 . G . . LowGQX END=55505769 GT ./. chr1 55509465 . G . . LowGQX END=55509759 GT ./. chr1 55512145 . T . . LowGQX END=55512371 GT ./. chr1 55516802 . G . . LowGQX END=55516962 GT ./. chr1 55517900 . G . . LowGQX END=55518136 GT ./. chr1 55518272 . A . . LowGQX END=55518516 GT ./. chr1 55521615 . G . . LowGQX END=55521914 GT ./. chr1 55522953 . A . . LowGQX END=55523239 GT ./. chr1 55523658 . G . . LowGQX END=55523934 GT ./. chr1 55524121 . G . . LowGQX END=55524372 GT ./. chr1 55525108 . T . . LowGQX END=55525388 GT ./. chr1 55526997 . A . . LowGQX END=55527281 GT ./. chr1 55528991 . G . . LowGQX END=55529309 GT ./. chr1 55534699 . T . . LowGQX END=55534799 GT ./. chr1 55537486 . C . . LowGQX END=55537598 GT ./. chr1 55537983 . C . . LowGQX END=55538083 GT ./. chr1 55538447 . A . . LowGQX END=55538547 GT ./. chr1 55539430 . T . . LowGQX END=55539590 GT ./. chr1 55541059 . G . . LowGQX END=55541213 GT ./. chr1 55542891 . G . . LowGQX END=55542991 GT ./. chr1 55544210 . C . . LowGQX END=55544325 GT ./. chr1 55545160 . T . . LowGQX END=55545333 GT ./. chr1 55546994 . C . . LowGQX END=55547098 GT ./. chr1 55548941 . T . . LowGQX END=55549041 GT ./. chr1 55549444 . C . . LowGQX END=55549604 GT ./. chr1 55551613 . A . . LowGQX END=55551713 GT ./. chr1 55555299 . C . . LowGQX END=55555414 GT ./. chr1 55557695 . C . . LowGQX END=55557800 GT ./. chr1 55558433 . T . . LowGQX END=55558592 GT ./. chr1 55559609 . C . . LowGQX END=55559761 GT ./. chr1 55560927 . C . . LowGQX END=55561070 GT ./. chr1 55562170 . C . . LowGQX END=55562296 GT ./. chr1 55562624 . C . . LowGQX END=55562846 GT ./. chr1 55563270 . C . . LowGQX END=55563391 GT ./. chr1 55563615 . C . . LowGQX END=55563758 GT ./. chr1 55564140 . T . . LowGQX END=55564240 GT ./. chr1 55565383 . A . . LowGQX END=55565543 GT ./. chr1 55566511 . C . . LowGQX END=55566638 GT ./. chr1 55567206 . G . . LowGQX END=55567377 GT ./. chr1 55569548 . C . . LowGQX END=55569694 GT ./. chr1 55571768 . T . . LowGQX END=55571937 GT ./. chr1 55572911 . C . . LowGQX END=55573104 GT ./. chr1 55575839 . A . . LowGQX END=55575939 GT ./. chr1 55586268 . C . . LowGQX END=55586430 GT ./. chr1 55587094 . G . . LowGQX END=55587194 GT ./. chr1 55589119 . C . . LowGQX END=55589276 GT ./. chr1 55590141 . C . . LowGQX END=55590302 GT ./. chr1 55590992 . C . . LowGQX END=55591222 GT ./. chr1 55591334 . A . . LowGQX END=55591434 GT ./. chr1 55595149 . C . . LowGQX END=55595249 GT ./. chr1 55598217 . C . . LowGQX END=55598374 GT ./. chr1 55599740 . T . . LowGQX END=55599840 GT ./. chr1 55599994 . T . . LowGQX END=55600094 GT ./. chr1 55603187 . C . . LowGQX END=55603362 GT ./. chr1 55603478 . C . . LowGQX END=55603578 GT ./. chr1 55604280 . C . . LowGQX END=55604392 GT ./. chr1 55604600 . A . . LowGQX END=55604700 GT ./. chr1 55607288 . C . . LowGQX END=55607405 GT ./. chr1 55608392 . G . . LowGQX END=55608492 GT ./. chr1 55608611 . G . . LowGQX END=55608793 GT ./. chr1 55609788 . T . . LowGQX END=55609888 GT ./. chr1 55611670 . C . . LowGQX END=55611783 GT ./. chr1 55612561 . A . . LowGQX END=55612734 GT ./. chr1 55613321 . C . . LowGQX END=55613472 GT ./. chr1 55614085 . T . . LowGQX END=55614244 GT ./. chr1 55619462 . T . . LowGQX END=55619617 GT ./. chr1 55619791 . C . . LowGQX END=55619954 GT ./. chr1 55620042 . G . . LowGQX END=55620142 GT ./. chr1 55620343 . C . . LowGQX END=55620452 GT ./. chr1 55622620 . C . . LowGQX END=55622725 GT ./. chr1 55622878 . A . . LowGQX END=55623044 GT ./. chr1 55624550 . C . . LowGQX END=55624710 GT ./. chr1 55625271 . A . . LowGQX END=55625371 GT ./. chr1 55627801 . T . . LowGQX END=55627955 GT ./. chr1 55631541 . A . . LowGQX END=55631641 GT ./. chr1 55632150 . A . . LowGQX END=55632309 GT ./. chr1 55637228 . C . . LowGQX END=55637352 GT ./. chr1 55638049 . C . . LowGQX END=55638194 GT ./. chr1 55642033 . A . . LowGQX END=55642133 GT ./. chr1 55643639 . C . . LowGQX END=55643829 GT ./. chr1 55680462 . C . . LowGQX END=55680787 GT ./. chr1 56197046 . A . . LowGQX END=56197793 GT ./. chr1 56962221 . A . . LowGQX END=56962351 GT ./. chr1 56977576 . A . . LowGQX END=56977827 GT ./. chr1 56989423 . T . . LowGQX END=56989574 GT ./. chr1 56989947 . A . . LowGQX END=56990229 GT ./. chr1 57002625 . A . . LowGQX END=57002787 GT ./. chr1 57044518 . C . . LowGQX END=57044729 GT ./. chr1 57110998 . A . . LowGQX END=57111209 GT ./. chr1 57140052 . A . . LowGQX END=57140198 GT ./. chr1 57157064 . A . . LowGQX END=57157164 GT ./. chr1 57157989 . A . . LowGQX END=57158178 GT ./. chr1 57159432 . T . . LowGQX END=57159532 GT ./. chr1 57161606 . A . . LowGQX END=57161835 GT ./. chr1 57169642 . A . . LowGQX END=57170151 GT ./. chr1 57171763 . A . . LowGQX END=57171894 GT ./. chr1 57173146 . A . . LowGQX END=57173389 GT ./. chr1 57185305 . T . . LowGQX END=57185405 GT ./. chr1 57185662 . T . . LowGQX END=57185762 GT ./. chr1 57185844 . A . . LowGQX END=57186005 GT ./. chr1 57189258 . T . . LowGQX END=57189409 GT ./. chr1 57192164 . T . . LowGQX END=57192264 GT ./. chr1 57202688 . G . . LowGQX END=57202841 GT ./. chr1 57204263 . G . . LowGQX END=57204363 GT ./. chr1 57206368 . A . . LowGQX END=57206471 GT ./. chr1 57207762 . C . . LowGQX END=57207915 GT ./. chr1 57209670 . C . . LowGQX END=57209770 GT ./. chr1 57209823 . A . . LowGQX END=57209942 GT ./. chr1 57216715 . A . . LowGQX END=57216879 GT ./. chr1 57219510 . A . . LowGQX END=57219611 GT ./. chr1 57221535 . G . . LowGQX END=57221635 GT ./. chr1 57224357 . T . . LowGQX END=57224457 GT ./. chr1 57233450 . C . . LowGQX END=57233614 GT ./. chr1 57252815 . A . . LowGQX END=57252915 GT ./. chr1 57254548 . T . . LowGQX END=57254810 GT ./. chr1 57257727 . A . . LowGQX END=57258479 GT ./. chr1 57284910 . G . . LowGQX END=57285010 GT ./. chr1 57320523 . A . . LowGQX END=57320703 GT ./. chr1 57333231 . T . . LowGQX END=57333427 GT ./. chr1 57340571 . T . . LowGQX END=57340818 GT ./. chr1 57341684 . G . . LowGQX END=57341934 GT ./. chr1 57347067 . T . . LowGQX END=57347359 GT ./. chr1 57349103 . G . . LowGQX END=57349406 GT ./. chr1 57351549 . A . . LowGQX END=57351892 GT ./. chr1 57372289 . A . . LowGQX END=57372517 GT ./. chr1 57373578 . C . . LowGQX END=57373838 GT ./. chr1 57378025 . G . . LowGQX END=57378350 GT ./. chr1 57383187 . C . . LowGQX END=57383441 GT ./. chr1 57395026 . T . . LowGQX END=57395283 GT ./. chr1 57397427 . T . . LowGQX END=57397603 GT ./. chr1 57398957 . T . . LowGQX END=57399213 GT ./. chr1 57406471 . A . . LowGQX END=57406737 GT ./. chr1 57409318 . C . . LowGQX END=57409549 GT ./. chr1 57411443 . A . . LowGQX END=57411786 GT ./. chr1 57415177 . A . . LowGQX END=57415477 GT ./. chr1 57417670 . A . . LowGQX END=57417905 GT ./. chr1 57420308 . C . . LowGQX END=57420552 GT ./. chr1 57422391 . A . . LowGQX END=57422635 GT ./. chr1 57425183 . G . . LowGQX END=57425283 GT ./. chr1 57425642 . G . . LowGQX END=57425901 GT ./. chr1 57431479 . A . . LowGQX END=57431673 GT ./. chr1 57476366 . A . . LowGQX END=57476466 GT ./. chr1 57476816 . A . . LowGQX END=57476948 GT ./. chr1 57480554 . A . . LowGQX END=57481107 GT ./. chr1 57489202 . A . . LowGQX END=57489315 GT ./. chr1 57491576 . G . . LowGQX END=57491792 GT ./. chr1 57499033 . A . . LowGQX END=57499133 GT ./. chr1 57499171 . A . . LowGQX END=57499271 GT ./. chr1 57528537 . T . . LowGQX END=57528637 GT ./. chr1 57535016 . G . . LowGQX END=57535116 GT ./. chr1 57536644 . C . . LowGQX END=57536744 GT ./. chr1 57537193 . A . . LowGQX END=57537363 GT ./. chr1 57537954 . A . . LowGQX END=57538090 GT ./. chr1 57602214 . A . . LowGQX END=57602317 GT ./. chr1 57610961 . A . . LowGQX END=57611105 GT ./. chr1 57756620 . T . . LowGQX END=57756720 GT ./. chr1 58521805 . T . . LowGQX END=58522153 GT ./. chr1 58939543 . T . . LowGQX END=58939643 GT ./. chr1 58946635 . A . . LowGQX END=58946849 GT ./. chr1 58971730 . A . . LowGQX END=58971884 GT ./. chr1 58992921 . T . . LowGQX END=58993021 GT ./. chr1 58996271 . A . . LowGQX END=58996404 GT ./. chr1 58999563 . G . . LowGQX END=58999783 GT ./. chr1 58999808 . G . . LowGQX END=59000006 GT ./. chr1 59002183 . A . . LowGQX END=59002416 GT ./. chr1 59004465 . A . . LowGQX END=59004969 GT ./. chr1 59041806 . G . . LowGQX END=59042880 GT ./. chr1 59125667 . A . . LowGQX END=59125830 GT ./. chr1 59126821 . A . . LowGQX END=59126921 GT ./. chr1 59127076 . A . . LowGQX END=59127186 GT ./. chr1 59131169 . A . . LowGQX END=59131306 GT ./. chr1 59132708 . A . . LowGQX END=59132901 GT ./. chr1 59133507 . G . . LowGQX END=59133607 GT ./. chr1 59134280 . G . . LowGQX END=59134432 GT ./. chr1 59134574 . C . . LowGQX END=59134734 GT ./. chr1 59137537 . T . . LowGQX END=59137690 GT ./. chr1 59139234 . G . . LowGQX END=59139334 GT ./. chr1 59141147 . A . . LowGQX END=59141255 GT ./. chr1 59142556 . A . . LowGQX END=59142731 GT ./. chr1 59147455 . A . . LowGQX END=59148220 GT ./. chr1 59150823 . A . . LowGQX END=59150926 GT ./. chr1 59154648 . T . . LowGQX END=59154800 GT ./. chr1 59155782 . T . . LowGQX END=59155938 GT ./. chr1 59156001 . A . . LowGQX END=59156101 GT ./. chr1 59158519 . T . . LowGQX END=59158619 GT ./. chr1 59160791 . A . . LowGQX END=59160891 GT ./. chr1 59165641 . G . . LowGQX END=59165741 GT ./. chr1 59247745 . C . . LowGQX END=59248745 GT ./. chr1 59250927 . C . . LowGQX END=59251027 GT ./. chr1 59359197 . T . . LowGQX END=59359390 GT ./. chr1 59364719 . T . . LowGQX END=59364958 GT ./. chr1 59787221 . A . . LowGQX END=59787423 GT ./. chr1 59805629 . G . . LowGQX END=59805742 GT ./. chr1 59811918 . G . . LowGQX END=59812073 GT ./. chr1 59844416 . G . . LowGQX END=59844516 GT ./. chr1 59922631 . A . . LowGQX END=59922751 GT ./. chr1 59977981 . A . . LowGQX END=59978114 GT ./. chr1 60019794 . A . . LowGQX END=60019902 GT ./. chr1 60073473 . A . . LowGQX END=60073585 GT ./. chr1 60091642 . A . . LowGQX END=60091742 GT ./. chr1 60103898 . A . . LowGQX END=60104050 GT ./. chr1 60106938 . C . . LowGQX END=60107038 GT ./. chr1 60125879 . T . . LowGQX END=60125979 GT ./. chr1 60132903 . A . . LowGQX END=60133078 GT ./. chr1 60139709 . A . . LowGQX END=60139809 GT ./. chr1 60163275 . T . . LowGQX END=60163375 GT ./. chr1 60223584 . G . . LowGQX END=60223684 GT ./. chr1 60228166 . C . . LowGQX END=60228266 GT ./. chr1 60280712 . T . . LowGQX END=60280872 GT ./. chr1 60287523 . A . . LowGQX END=60287677 GT ./. chr1 60294439 . G . . LowGQX END=60294539 GT ./. chr1 60297811 . A . . LowGQX END=60297963 GT ./. chr1 60299075 . A . . LowGQX END=60299212 GT ./. chr1 60300945 . T . . LowGQX END=60301101 GT ./. chr1 60302527 . A . . LowGQX END=60302627 GT ./. chr1 60305972 . T . . LowGQX END=60306072 GT ./. chr1 60309102 . A . . LowGQX END=60309273 GT ./. chr1 60312715 . A . . LowGQX END=60312895 GT ./. chr1 60313985 . A . . LowGQX END=60314191 GT ./. chr1 60314743 . A . . LowGQX END=60314858 GT ./. chr1 60324094 . T . . LowGQX END=60324194 GT ./. chr1 60324578 . A . . LowGQX END=60324738 GT ./. chr1 60325858 . A . . LowGQX END=60326003 GT ./. chr1 60328453 . T . . LowGQX END=60328553 GT ./. chr1 60330212 . A . . LowGQX END=60330372 GT ./. chr1 60330827 . C . . LowGQX END=60330927 GT ./. chr1 60331542 . A . . LowGQX END=60331702 GT ./. chr1 60333920 . A . . LowGQX END=60334080 GT ./. chr1 60336699 . A . . LowGQX END=60336799 GT ./. chr1 60338465 . A . . LowGQX END=60338640 GT ./. chr1 60359321 . T . . LowGQX END=60359504 GT ./. chr1 60366635 . A . . LowGQX END=60366778 GT ./. chr1 60370530 . T . . LowGQX END=60370741 GT ./. chr1 60373456 . A . . LowGQX END=60373602 GT ./. chr1 60375454 . A . . LowGQX END=60375664 GT ./. chr1 60377278 . A . . LowGQX END=60377443 GT ./. chr1 60377832 . A . . LowGQX END=60377986 GT ./. chr1 60381608 . A . . LowGQX END=60381775 GT ./. chr1 60392207 . A . . LowGQX END=60392421 GT ./. chr1 60456343 . T . . LowGQX END=60456508 GT ./. chr1 60463279 . A . . LowGQX END=60463491 GT ./. chr1 60466679 . C . . LowGQX END=60466839 GT ./. chr1 60474317 . C . . LowGQX END=60474417 GT ./. chr1 60476047 . A . . LowGQX END=60476147 GT ./. chr1 60491071 . A . . LowGQX END=60491173 GT ./. chr1 60499146 . A . . LowGQX END=60499316 GT ./. chr1 60503662 . A . . LowGQX END=60503782 GT ./. chr1 60505587 . A . . LowGQX END=60505855 GT ./. chr1 60506661 . A . . LowGQX END=60506806 GT ./. chr1 60520874 . A . . LowGQX END=60521113 GT ./. chr1 60538207 . A . . LowGQX END=60538318 GT ./. chr1 61331041 . A . . LowGQX END=61331141 GT ./. chr1 61543249 . A . . LowGQX END=61543349 GT ./. chr1 61547558 . T . . LowGQX END=61547775 GT ./. chr1 61548413 . C . . LowGQX END=61548513 GT ./. chr1 61553819 . A . . LowGQX END=61554355 GT ./. chr1 61743175 . A . . LowGQX END=61743275 GT ./. chr1 61798172 . T . . LowGQX END=61798272 GT ./. chr1 61818120 . A . . LowGQX END=61818290 GT ./. chr1 61824817 . A . . LowGQX END=61824949 GT ./. chr1 61848907 . A . . LowGQX END=61849040 GT ./. chr1 61869757 . A . . LowGQX END=61869957 GT ./. chr1 61872202 . A . . LowGQX END=61872402 GT ./. chr1 61892133 . A . . LowGQX END=61892233 GT ./. chr1 61920913 . C . . LowGQX END=61921064 GT ./. chr1 62149107 . T . . LowGQX END=62149267 GT ./. chr1 62160347 . C . . LowGQX END=62160447 GT ./. chr1 62165824 . C . . LowGQX END=62165947 GT ./. chr1 62166602 . G . . LowGQX END=62166702 GT ./. chr1 62175000 . C . . LowGQX END=62175159 GT ./. chr1 62189372 . C . . LowGQX END=62189472 GT ./. chr1 62190624 . G . . LowGQX END=62190979 GT ./. chr1 62228526 . T . . LowGQX END=62228626 GT ./. chr1 62228683 . A . . LowGQX END=62228854 GT ./. chr1 62231939 . T . . LowGQX END=62232148 GT ./. chr1 62234953 . A . . LowGQX END=62235097 GT ./. chr1 62237101 . A . . LowGQX END=62237301 GT ./. chr1 62240876 . A . . LowGQX END=62241009 GT ./. chr1 62253424 . A . . LowGQX END=62253647 GT ./. chr1 62257018 . A . . LowGQX END=62257122 GT ./. chr1 62261135 . T . . LowGQX END=62261235 GT ./. chr1 62262957 . A . . LowGQX END=62262960;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 62262961 . C . . LowGQX END=62263103 GT ./. chr1 62267293 . A . . LowGQX END=62267444 GT ./. chr1 62271109 . T . . LowGQX END=62271209 GT ./. chr1 62274074 . T . . LowGQX END=62274225 GT ./. chr1 62288615 . A . . LowGQX END=62288754 GT ./. chr1 62293092 . A . . LowGQX END=62293258 GT ./. chr1 62299324 . A . . LowGQX END=62299460 GT ./. chr1 62321700 . A . . LowGQX END=62321914 GT ./. chr1 62327151 . T . . LowGQX END=62327342 GT ./. chr1 62329908 . A . . LowGQX END=62330308 GT ./. chr1 62340913 . A . . LowGQX END=62341041 GT ./. chr1 62349907 . A . . LowGQX END=62350083 GT ./. chr1 62365241 . T . . LowGQX END=62365341 GT ./. chr1 62366952 . A . . LowGQX END=62367152 GT ./. chr1 62373992 . T . . LowGQX END=62374157 GT ./. chr1 62380248 . T . . LowGQX END=62380348 GT ./. chr1 62393400 . A . . LowGQX END=62393504 GT ./. chr1 62418023 . A . . LowGQX END=62418123 GT ./. chr1 62455828 . T . . LowGQX END=62456039 GT ./. chr1 62483524 . A . . LowGQX END=62483624 GT ./. chr1 62503636 . T . . LowGQX END=62503736 GT ./. chr1 62516635 . T . . LowGQX END=62516735 GT ./. chr1 62519961 . G . . LowGQX END=62520061 GT ./. chr1 62545120 . A . . LowGQX END=62545242 GT ./. chr1 62550185 . A . . LowGQX END=62550365 GT ./. chr1 62565986 . C . . LowGQX END=62566086 GT ./. chr1 62574101 . T . . LowGQX END=62574201 GT ./. chr1 62579713 . C . . LowGQX END=62579923 GT ./. chr1 62582152 . G . . LowGQX END=62582354 GT ./. chr1 62582802 . A . . LowGQX END=62582918 GT ./. chr1 62586851 . A . . LowGQX END=62586970 GT ./. chr1 62588662 . T . . LowGQX END=62588762 GT ./. chr1 62593642 . A . . LowGQX END=62593769 GT ./. chr1 62594511 . A . . LowGQX END=62594620 GT ./. chr1 62613954 . A . . LowGQX END=62614065 GT ./. chr1 62626544 . T . . LowGQX END=62626644 GT ./. chr1 62628524 . C . . LowGQX END=62628676 GT ./. chr1 62644071 . G . . LowGQX END=62644171 GT ./. chr1 62672299 . C . . LowGQX END=62673311 GT ./. chr1 62675453 . A . . LowGQX END=62677047 GT ./. chr1 62703947 . C . . LowGQX END=62704056 GT ./. chr1 62713142 . A . . LowGQX END=62713347 GT ./. chr1 62718697 . C . . LowGQX END=62718884 GT ./. chr1 62728692 . T . . LowGQX END=62729052 GT ./. chr1 62732398 . G . . LowGQX END=62732498 GT ./. chr1 62733887 . A . . LowGQX END=62734247 GT ./. chr1 62737148 . A . . LowGQX END=62737264 GT ./. chr1 62738874 . A . . LowGQX END=62740762 GT ./. chr1 62747179 . A . . LowGQX END=62747279 GT ./. chr1 62905537 . A . . LowGQX END=62905711 GT ./. chr1 62907157 . A . . LowGQX END=62907282 GT ./. chr1 62907864 . A . . LowGQX END=62907973 GT ./. chr1 62908828 . A . . LowGQX END=62908993 GT ./. chr1 62910407 . A . . LowGQX END=62911103 GT ./. chr1 62913010 . A . . LowGQX END=62913185 GT ./. chr1 62914134 . A . . LowGQX END=62914340 GT ./. chr1 62915915 . A . . LowGQX END=62916655 GT ./. chr1 62920901 . A . . LowGQX END=62921171 GT ./. chr1 62923207 . A . . LowGQX END=62923379 GT ./. chr1 62939651 . A . . LowGQX END=62939762 GT ./. chr1 62940877 . A . . LowGQX END=62941025 GT ./. chr1 62941376 . A . . LowGQX END=62941617 GT ./. chr1 62941733 . T . . LowGQX END=62941833 GT ./. chr1 62943369 . A . . LowGQX END=62943506 GT ./. chr1 62945348 . T . . LowGQX END=62945448 GT ./. chr1 62953027 . A . . LowGQX END=62953127 GT ./. chr1 62954439 . G . . LowGQX END=62954539 GT ./. chr1 62954543 . A . . LowGQX END=62954739 GT ./. chr1 62958323 . T . . LowGQX END=62958521 GT ./. chr1 62959944 . A . . LowGQX END=62960141 GT ./. chr1 62961250 . A . . LowGQX END=62961410 GT ./. chr1 62961978 . C . . LowGQX END=62962171 GT ./. chr1 62970299 . A . . LowGQX END=62970456 GT ./. chr1 62971351 . A . . LowGQX END=62971490 GT ./. chr1 62973561 . C . . LowGQX END=62973732 GT ./. chr1 62976246 . A . . LowGQX END=62976347 GT ./. chr1 62979113 . A . . LowGQX END=62979280 GT ./. chr1 62979385 . A . . LowGQX END=62979572 GT ./. chr1 62993820 . A . . LowGQX END=62993979 GT ./. chr1 62994946 . A . . LowGQX END=62995120 GT ./. chr1 63001162 . A . . LowGQX END=63001306 GT ./. chr1 63003560 . A . . LowGQX END=63003735 GT ./. chr1 63005214 . A . . LowGQX END=63005332 GT ./. chr1 63005421 . A . . LowGQX END=63005566 GT ./. chr1 63008277 . A . . LowGQX END=63008377 GT ./. chr1 63009322 . T . . LowGQX END=63009422 GT ./. chr1 63010614 . C . . LowGQX END=63010714 GT ./. chr1 63018401 . A . . LowGQX END=63018575 GT ./. chr1 63021494 . A . . LowGQX END=63021684 GT ./. chr1 63024658 . A . . LowGQX END=63024894 GT ./. chr1 63027282 . A . . LowGQX END=63027436 GT ./. chr1 63042931 . A . . LowGQX END=63043037 GT ./. chr1 63044457 . A . . LowGQX END=63044640 GT ./. chr1 63048841 . T . . LowGQX END=63048941 GT ./. chr1 63050450 . A . . LowGQX END=63050550 GT ./. chr1 63052176 . A . . LowGQX END=63052298 GT ./. chr1 63063187 . T . . LowGQX END=63063784 GT ./. chr1 63064316 . T . . LowGQX END=63064529 GT ./. chr1 63066702 . A . . LowGQX END=63066919 GT ./. chr1 63067389 . G . . LowGQX END=63067605 GT ./. chr1 63067905 . T . . LowGQX END=63068103 GT ./. chr1 63069589 . T . . LowGQX END=63069958 GT ./. chr1 63070253 . G . . LowGQX END=63070540 GT ./. chr1 63084345 . C . . LowGQX END=63084542 GT ./. chr1 63085568 . T . . LowGQX END=63085668 GT ./. chr1 63090928 . A . . LowGQX END=63091075 GT ./. chr1 63096909 . A . . LowGQX END=63097079 GT ./. chr1 63099160 . A . . LowGQX END=63099260 GT ./. chr1 63100412 . A . . LowGQX END=63100596 GT ./. chr1 63102136 . T . . LowGQX END=63102292 GT ./. chr1 63113355 . T . . LowGQX END=63113455 GT ./. chr1 63113775 . A . . LowGQX END=63113992 GT ./. chr1 63114084 . A . . LowGQX END=63114218 GT ./. chr1 63119324 . T . . LowGQX END=63119481 GT ./. chr1 63119653 . A . . LowGQX END=63119833 GT ./. chr1 63128694 . A . . LowGQX END=63128804 GT ./. chr1 63153807 . C . . LowGQX END=63153967 GT ./. chr1 63269446 . T . . LowGQX END=63269546 GT ./. chr1 63270781 . A . . LowGQX END=63270935 GT ./. chr1 63282244 . A . . LowGQX END=63282482 GT ./. chr1 63284674 . A . . LowGQX END=63285009 GT ./. chr1 63286796 . T . . LowGQX END=63286896 GT ./. chr1 63294709 . A . . LowGQX END=63294889 GT ./. chr1 63299699 . T . . LowGQX END=63299799 GT ./. chr1 63300436 . T . . LowGQX END=63300536 GT ./. chr1 63301012 . T . . LowGQX END=63301112 GT ./. chr1 63307047 . T . . LowGQX END=63307221 GT ./. chr1 63329661 . A . . LowGQX END=63329861 GT ./. chr1 63339923 . C . . LowGQX END=63340023 GT ./. chr1 63788717 . A . . LowGQX END=63790178 GT ./. chr1 63836598 . T . . LowGQX END=63836782 GT ./. chr1 63862133 . C . . LowGQX END=63862320 GT ./. chr1 63867874 . T . . LowGQX END=63868066 GT ./. chr1 63870073 . T . . LowGQX END=63870264 GT ./. chr1 63871937 . G . . LowGQX END=63872122 GT ./. chr1 63872682 . T . . LowGQX END=63872849 GT ./. chr1 63876764 . A . . LowGQX END=63877054 GT ./. chr1 63877546 . A . . LowGQX END=63877784 GT ./. chr1 63879681 . A . . LowGQX END=63879869 GT ./. chr1 63881493 . A . . LowGQX END=63881680 GT ./. chr1 63884990 . A . . LowGQX END=63885163 GT ./. chr1 63894353 . G . . LowGQX END=63894524 GT ./. chr1 63894548 . A . . LowGQX END=63894849 GT ./. chr1 63902443 . C . . LowGQX END=63902743 GT ./. chr1 63912453 . T . . LowGQX END=63912553 GT ./. chr1 63913221 . G . . LowGQX END=63913321 GT ./. chr1 63919511 . G . . LowGQX END=63919665 GT ./. chr1 63920048 . T . . LowGQX END=63920148 GT ./. chr1 63920551 . A . . LowGQX END=63920651 GT ./. chr1 63944363 . A . . LowGQX END=63944520 GT ./. chr1 63955712 . T . . LowGQX END=63955892 GT ./. chr1 63974117 . T . . LowGQX END=63974271 GT ./. chr1 63975684 . A . . LowGQX END=63975853 GT ./. chr1 63988611 . T . . LowGQX END=63988711 GT ./. chr1 63988753 . T . . LowGQX END=63988853 GT ./. chr1 63991242 . G . . LowGQX END=63991442 GT ./. chr1 63997419 . T . . LowGQX END=63997769 GT ./. chr1 63998335 . T . . LowGQX END=63998489 GT ./. chr1 63999113 . T . . LowGQX END=63999323 GT ./. chr1 63999764 . A . . LowGQX END=63999890 GT ./. chr1 64011545 . T . . LowGQX END=64011731 GT ./. chr1 64014962 . C . . LowGQX END=64015062 GT ./. chr1 64015159 . G . . LowGQX END=64015262 GT ./. chr1 64017394 . A . . LowGQX END=64017508 GT ./. chr1 64021027 . A . . LowGQX END=64021189 GT ./. chr1 64022783 . A . . LowGQX END=64022963 GT ./. chr1 64027378 . A . . LowGQX END=64027531 GT ./. chr1 64033938 . A . . LowGQX END=64034248 GT ./. chr1 64036690 . A . . LowGQX END=64036802 GT ./. chr1 64038041 . G . . LowGQX END=64038201 GT ./. chr1 64059109 . C . . LowGQX END=64059457 GT ./. chr1 64089131 . G . . LowGQX END=64089432 GT ./. chr1 64095045 . G . . LowGQX END=64095310 GT ./. chr1 64095562 . T . . LowGQX END=64095811 GT ./. chr1 64097277 . T . . LowGQX END=64097505 GT ./. chr1 64100449 . A . . LowGQX END=64100742 GT ./. chr1 64101854 . T . . LowGQX END=64102111 GT ./. chr1 64104305 . G . . LowGQX END=64104523 GT ./. chr1 64114137 . G . . LowGQX END=64114375 GT ./. chr1 64117289 . T . . LowGQX END=64117575 GT ./. chr1 64119952 . C . . LowGQX END=64120189 GT ./. chr1 64125206 . A . . LowGQX END=64125398 GT ./. chr1 64239983 . G . . LowGQX END=64240083 GT ./. chr1 64240085 . A . . LowGQX END=64240241 GT ./. chr1 64474963 . C . . LowGQX END=64475063 GT ./. chr1 64515361 . A . . LowGQX END=64515653 GT ./. chr1 64516324 . G . . LowGQX END=64516424 GT ./. chr1 64603050 . A . . LowGQX END=64603182 GT ./. chr1 64605790 . A . . LowGQX END=64606112 GT ./. chr1 64608086 . A . . LowGQX END=64608344 GT ./. chr1 64624662 . A . . LowGQX END=64624878 GT ./. chr1 64643109 . A . . LowGQX END=64644541 GT ./. chr1 64669717 . A . . LowGQX END=64669817 GT ./. chr1 64671260 . T . . LowGQX END=64671413 GT ./. chr1 64672444 . T . . LowGQX END=64672595 GT ./. chr1 64676423 . A . . LowGQX END=64676525 GT ./. chr1 64680496 . A . . LowGQX END=64680618 GT ./. chr1 64686450 . A . . LowGQX END=64686617 GT ./. chr1 64698239 . T . . LowGQX END=64698339 GT ./. chr1 64707273 . T . . LowGQX END=64707426 GT ./. chr1 64709765 . A . . LowGQX END=64709865 GT ./. chr1 64726282 . C . . LowGQX END=64726382 GT ./. chr1 64732684 . A . . LowGQX END=64732892 GT ./. chr1 64936427 . C . . LowGQX END=64936628 GT ./. chr1 65016259 . A . . LowGQX END=65016359 GT ./. chr1 65047837 . A . . LowGQX END=65047990 GT ./. chr1 65068427 . A . . LowGQX END=65068646 GT ./. chr1 65095036 . A . . LowGQX END=65095167 GT ./. chr1 65098280 . A . . LowGQX END=65098429 GT ./. chr1 65099725 . A . . LowGQX END=65099946 GT ./. chr1 65107501 . A . . LowGQX END=65107655 GT ./. chr1 65113482 . A . . LowGQX END=65113720 GT ./. chr1 65117842 . A . . LowGQX END=65117996 GT ./. chr1 65119439 . A . . LowGQX END=65119567 GT ./. chr1 65120367 . A . . LowGQX END=65120489 GT ./. chr1 65124386 . A . . LowGQX END=65124559 GT ./. chr1 65129376 . A . . LowGQX END=65129523 GT ./. chr1 65130179 . A . . LowGQX END=65130365 GT ./. chr1 65131738 . A . . LowGQX END=65131853 GT ./. chr1 65137245 . A . . LowGQX END=65137372 GT ./. chr1 65138839 . A . . LowGQX END=65138943 GT ./. chr1 65139029 . A . . LowGQX END=65139150 GT ./. chr1 65141082 . A . . LowGQX END=65141247 GT ./. chr1 65141574 . T . . LowGQX END=65141674 GT ./. chr1 65142576 . A . . LowGQX END=65142697 GT ./. chr1 65143800 . C . . LowGQX END=65143996 GT ./. chr1 65145276 . A . . LowGQX END=65145442 GT ./. chr1 65146930 . A . . LowGQX END=65147030 GT ./. chr1 65147686 . A . . LowGQX END=65147792 GT ./. chr1 65157004 . A . . LowGQX END=65157247 GT ./. chr1 65210843 . G . . LowGQX END=65211113 GT ./. chr1 65234267 . A . . LowGQX END=65234423 GT ./. chr1 65243304 . A . . LowGQX END=65243778 GT ./. chr1 65247061 . A . . LowGQX END=65247257 GT ./. chr1 65255069 . A . . LowGQX END=65255200 GT ./. chr1 65268652 . C . . LowGQX END=65268752 GT ./. chr1 65270416 . G . . LowGQX END=65270524 GT ./. chr1 65270672 . A . . LowGQX END=65270791 GT ./. chr1 65272887 . A . . LowGQX END=65273160 GT ./. chr1 65278419 . A . . LowGQX END=65278535 GT ./. chr1 65280385 . A . . LowGQX END=65280526 GT ./. chr1 65296520 . A . . LowGQX END=65296671 GT ./. chr1 65300243 . T . . LowGQX END=65300343 GT ./. chr1 65301077 . A . . LowGQX END=65301237 GT ./. chr1 65301779 . A . . LowGQX END=65301901 GT ./. chr1 65303613 . A . . LowGQX END=65303790 GT ./. chr1 65304146 . A . . LowGQX END=65304275 GT ./. chr1 65305284 . A . . LowGQX END=65305481 GT ./. chr1 65306926 . A . . LowGQX END=65307026 GT ./. chr1 65307132 . A . . LowGQX END=65307287 GT ./. chr1 65309745 . A . . LowGQX END=65309901 GT ./. chr1 65310435 . A . . LowGQX END=65310575 GT ./. chr1 65311194 . A . . LowGQX END=65311326 GT ./. chr1 65312326 . A . . LowGQX END=65312426 GT ./. chr1 65313173 . A . . LowGQX END=65313361 GT ./. chr1 65316485 . A . . LowGQX END=65316596 GT ./. chr1 65321190 . A . . LowGQX END=65321384 GT ./. chr1 65323337 . A . . LowGQX END=65323465 GT ./. chr1 65325786 . A . . LowGQX END=65325948 GT ./. chr1 65330468 . A . . LowGQX END=65330658 GT ./. chr1 65332547 . A . . LowGQX END=65332894 GT ./. chr1 65334992 . A . . LowGQX END=65335160 GT ./. chr1 65339051 . A . . LowGQX END=65339209 GT ./. chr1 65344706 . A . . LowGQX END=65344834 GT ./. chr1 65348958 . A . . LowGQX END=65349161 GT ./. chr1 65351895 . T . . LowGQX END=65351995 GT ./. chr1 65524045 . T . . LowGQX END=65524257 GT ./. chr1 65614089 . C . . LowGQX END=65614238 GT ./. chr1 65656391 . A . . LowGQX END=65656515 GT ./. chr1 65684435 . A . . LowGQX END=65684612 GT ./. chr1 65690433 . A . . LowGQX END=65690556 GT ./. chr1 65691744 . A . . LowGQX END=65691863 GT ./. chr1 65720147 . A . . LowGQX END=65720517 GT ./. chr1 65730495 . G . . LowGQX END=65730655 GT ./. chr1 65775417 . C . . LowGQX END=65775622 GT ./. chr1 65830316 . A . . LowGQX END=65830471 GT ./. chr1 65831543 . G . . LowGQX END=65831643 GT ./. chr1 65831729 . A . . LowGQX END=65831882 GT ./. chr1 65845083 . A . . LowGQX END=65845210 GT ./. chr1 65849874 . A . . LowGQX END=65850012 GT ./. chr1 65851393 . A . . LowGQX END=65851592 GT ./. chr1 65852493 . A . . LowGQX END=65852615 GT ./. chr1 65854009 . G . . LowGQX END=65854109 GT ./. chr1 65854937 . A . . LowGQX END=65855135 GT ./. chr1 65855221 . G . . LowGQX END=65855321 GT ./. chr1 65858112 . A . . LowGQX END=65858551 GT ./. chr1 65860579 . A . . LowGQX END=65860718 GT ./. chr1 65864481 . T . . LowGQX END=65864581 GT ./. chr1 65867442 . A . . LowGQX END=65867612 GT ./. chr1 65871551 . A . . LowGQX END=65871819 GT ./. chr1 65874322 . A . . LowGQX END=65874469 GT ./. chr1 65876931 . A . . LowGQX END=65877112 GT ./. chr1 65878605 . A . . LowGQX END=65878711 GT ./. chr1 65886306 . G . . LowGQX END=65886466 GT ./. chr1 65887071 . G . . LowGQX END=65887171 GT ./. chr1 65890914 . A . . LowGQX END=65891074 GT ./. chr1 65893426 . G . . LowGQX END=65893526 GT ./. chr1 65895543 . A . . LowGQX END=65895734 GT ./. chr1 65897484 . A . . LowGQX END=65897605 GT ./. chr1 66031198 . T . . LowGQX END=66031340 GT ./. chr1 66036105 . C . . LowGQX END=66036537 GT ./. chr1 66037958 . A . . LowGQX END=66038184 GT ./. chr1 66058289 . T . . LowGQX END=66058600 GT ./. chr1 66062080 . A . . LowGQX END=66062328 GT ./. chr1 66064292 . A . . LowGQX END=66064539 GT ./. chr1 66067024 . A . . LowGQX END=66067417 GT ./. chr1 66067475 . A . . LowGQX END=66067695 GT ./. chr1 66070670 . T . . LowGQX END=66070972 GT ./. chr1 66074385 . A . . LowGQX END=66074636 GT ./. chr1 66075579 . G . . LowGQX END=66075841 GT ./. chr1 66075846 . T . . LowGQX END=66076031 GT ./. chr1 66081640 . T . . LowGQX END=66081959 GT ./. chr1 66083596 . G . . LowGQX END=66083881 GT ./. chr1 66085560 . C . . LowGQX END=66085758 GT ./. chr1 66086985 . A . . LowGQX END=66087193 GT ./. chr1 66088538 . T . . LowGQX END=66088706 GT ./. chr1 66091740 . A . . LowGQX END=66091854 GT ./. chr1 66094973 . T . . LowGQX END=66095073 GT ./. chr1 66095873 . C . . LowGQX END=66096089 GT ./. chr1 66098784 . T . . LowGQX END=66098914 GT ./. chr1 66101823 . A . . LowGQX END=66102750 GT ./. chr1 66378969 . C . . LowGQX END=66379069 GT ./. chr1 66384278 . A . . LowGQX END=66384521 GT ./. chr1 66458588 . A . . LowGQX END=66458828 GT ./. chr1 66618164 . G . . LowGQX END=66618264 GT ./. chr1 66713141 . A . . LowGQX END=66713340 GT ./. chr1 66723091 . A . . LowGQX END=66723191 GT ./. chr1 66723299 . T . . LowGQX END=66723399 GT ./. chr1 66723462 . C . . LowGQX END=66723562 GT ./. chr1 66731714 . T . . LowGQX END=66731814 GT ./. chr1 66732335 . C . . LowGQX END=66732435 GT ./. chr1 66798071 . T . . LowGQX END=66798306 GT ./. chr1 66820504 . G . . LowGQX END=66820604 GT ./. chr1 66821207 . C . . LowGQX END=66821307 GT ./. chr1 66827296 . A . . LowGQX END=66827479 GT ./. chr1 66828849 . A . . LowGQX END=66828952 GT ./. chr1 66829088 . A . . LowGQX END=66829257 GT ./. chr1 66831348 . A . . LowGQX END=66831452 GT ./. chr1 66833377 . A . . LowGQX END=66833536 GT ./. chr1 66833624 . A . . LowGQX END=66833751 GT ./. chr1 66834468 . A . . LowGQX END=66834655 GT ./. chr1 66837994 . A . . LowGQX END=66838364 GT ./. chr1 66999997 . G . . LowGQX END=67000097 GT ./. chr1 67091512 . T . . LowGQX END=67091612 GT ./. chr1 67098661 . G . . LowGQX END=67098816 GT ./. chr1 67099755 . C . . LowGQX END=67099855 GT ./. chr1 67101613 . A . . LowGQX END=67101713 GT ./. chr1 67105388 . G . . LowGQX END=67105539 GT ./. chr1 67108471 . C . . LowGQX END=67108571 GT ./. chr1 67109195 . G . . LowGQX END=67109405 GT ./. chr1 67125712 . A . . LowGQX END=67125872 GT ./. chr1 67126152 . T . . LowGQX END=67126252 GT ./. chr1 67131893 . A . . LowGQX END=67132442 GT ./. chr1 67133169 . C . . LowGQX END=67133269 GT ./. chr1 67136641 . T . . LowGQX END=67136741 GT ./. chr1 67137603 . A . . LowGQX END=67137703 GT ./. chr1 67138897 . G . . LowGQX END=67139057 GT ./. chr1 67142684 . C . . LowGQX END=67142784 GT ./. chr1 67145289 . G . . LowGQX END=67145449 GT ./. chr1 67147550 . A . . LowGQX END=67148055 GT ./. chr1 67149789 . G . . LowGQX END=67149890 GT ./. chr1 67154829 . A . . LowGQX END=67154961 GT ./. chr1 67155871 . A . . LowGQX END=67156002 GT ./. chr1 67160045 . A . . LowGQX END=67160205 GT ./. chr1 67161031 . A . . LowGQX END=67161179 GT ./. chr1 67184975 . A . . LowGQX END=67185091 GT ./. chr1 67194945 . A . . LowGQX END=67195105 GT ./. chr1 67199429 . A . . LowGQX END=67199566 GT ./. chr1 67205016 . A . . LowGQX END=67205223 GT ./. chr1 67206269 . G . . LowGQX END=67206424 GT ./. chr1 67206953 . A . . LowGQX END=67207122 GT ./. chr1 67208718 . T . . LowGQX END=67208818 GT ./. chr1 67220340 . T . . LowGQX END=67220463 GT ./. chr1 67236066 . T . . LowGQX END=67236166 GT ./. chr1 67236221 . A . . LowGQX END=67236321 GT ./. chr1 67241960 . A . . LowGQX END=67242089 GT ./. chr1 67242932 . A . . LowGQX END=67243140 GT ./. chr1 67263694 . T . . LowGQX END=67263931 GT ./. chr1 67266728 . A . . LowGQX END=67266907 GT ./. chr1 67279789 . A . . LowGQX END=67279889 GT ./. chr1 67288042 . A . . LowGQX END=67288203 GT ./. chr1 67292501 . A . . LowGQX END=67292732 GT ./. chr1 67293493 . A . . LowGQX END=67293596 GT ./. chr1 67299266 . A . . LowGQX END=67299392 GT ./. chr1 67299672 . A . . LowGQX END=67299862 GT ./. chr1 67301307 . A . . LowGQX END=67301463 GT ./. chr1 67303335 . T . . LowGQX END=67303515 GT ./. chr1 67306150 . A . . LowGQX END=67306357 GT ./. chr1 67313155 . T . . LowGQX END=67313364 GT ./. chr1 67313851 . G . . LowGQX END=67314011 GT ./. chr1 67327828 . A . . LowGQX END=67328018 GT ./. chr1 67337029 . A . . LowGQX END=67337195 GT ./. chr1 67340462 . A . . LowGQX END=67340623 GT ./. chr1 67356763 . A . . LowGQX END=67356963 GT ./. chr1 67358910 . A . . LowGQX END=67359099 GT ./. chr1 67370862 . C . . LowGQX END=67371061 GT ./. chr1 67384747 . C . . LowGQX END=67384847 GT ./. chr1 67390323 . G . . LowGQX END=67390517 GT ./. chr1 67390635 . A . . LowGQX END=67390851 GT ./. chr1 67391824 . G . . LowGQX END=67391926 GT ./. chr1 67394560 . T . . LowGQX END=67394660 GT ./. chr1 67394784 . T . . LowGQX END=67394884 GT ./. chr1 67396030 . C . . LowGQX END=67396130 GT ./. chr1 67405674 . A . . LowGQX END=67405774 GT ./. chr1 67411801 . T . . LowGQX END=67411994 GT ./. chr1 67423740 . A . . LowGQX END=67423906 GT ./. chr1 67424532 . A . . LowGQX END=67424669 GT ./. chr1 67425290 . A . . LowGQX END=67425445 GT ./. chr1 67428758 . A . . LowGQX END=67428858 GT ./. chr1 67436489 . A . . LowGQX END=67436669 GT ./. chr1 67437276 . G . . LowGQX END=67437429 GT ./. chr1 67438578 . A . . LowGQX END=67438678 GT ./. chr1 67442276 . A . . LowGQX END=67442408 GT ./. chr1 67447460 . A . . LowGQX END=67447604 GT ./. chr1 67450253 . A . . LowGQX END=67450586 GT ./. chr1 67452072 . T . . LowGQX END=67452172 GT ./. chr1 67469972 . C . . LowGQX END=67470183 GT ./. chr1 67474050 . G . . LowGQX END=67474150 GT ./. chr1 67474717 . A . . LowGQX END=67474902 GT ./. chr1 67486001 . C . . LowGQX END=67486182 GT ./. chr1 67487162 . T . . LowGQX END=67487337 GT ./. chr1 67507868 . A . . LowGQX END=67508063 GT ./. chr1 67512897 . T . . LowGQX END=67513102 GT ./. chr1 67515414 . T . . LowGQX END=67515585 GT ./. chr1 67516065 . G . . LowGQX END=67516239 GT ./. chr1 67517644 . T . . LowGQX END=67517804 GT ./. chr1 67518403 . A . . LowGQX END=67518726 GT ./. chr1 67519443 . C . . LowGQX END=67519748 GT ./. chr1 67558686 . T . . LowGQX END=67559290 GT ./. chr1 67560916 . A . . LowGQX END=67561107 GT ./. chr1 67561863 . C . . LowGQX END=67562020 GT ./. chr1 67568920 . C . . LowGQX END=67569066 GT ./. chr1 67577244 . T . . LowGQX END=67577344 GT ./. chr1 67579386 . A . . LowGQX END=67579486 GT ./. chr1 67580973 . A . . LowGQX END=67581150 GT ./. chr1 67591351 . T . . LowGQX END=67591595 GT ./. chr1 67592837 . T . . LowGQX END=67592937 GT ./. chr1 67633753 . A . . LowGQX END=67633925 GT ./. chr1 67634974 . T . . LowGQX END=67635373 GT ./. chr1 67648468 . G . . LowGQX END=67648694 GT ./. chr1 67666369 . A . . LowGQX END=67666632 GT ./. chr1 67672542 . C . . LowGQX END=67672790 GT ./. chr1 67672808 . G . . LowGQX END=67672908 GT ./. chr1 67673231 . T . . LowGQX END=67673391 GT ./. chr1 67685206 . A . . LowGQX END=67685465 GT ./. chr1 67702345 . C . . LowGQX END=67702537 GT ./. chr1 67705811 . T . . LowGQX END=67706016 GT ./. chr1 67721469 . A . . LowGQX END=67721662 GT ./. chr1 67724110 . T . . LowGQX END=67724863 GT ./. chr1 67786000 . T . . LowGQX END=67786179 GT ./. chr1 67787234 . G . . LowGQX END=67787624 GT ./. chr1 67792367 . G . . LowGQX END=67792584 GT ./. chr1 67793832 . G . . LowGQX END=67794119 GT ./. chr1 67795219 . T . . LowGQX END=67795464 GT ./. chr1 67796292 . A . . LowGQX END=67796545 GT ./. chr1 67804256 . T . . LowGQX END=67804460 GT ./. chr1 67816502 . A . . LowGQX END=67816824 GT ./. chr1 67833457 . T . . LowGQX END=67833760 GT ./. chr1 67838068 . T . . LowGQX END=67838518 GT ./. chr1 67845618 . T . . LowGQX END=67845858 GT ./. chr1 67852211 . A . . LowGQX END=67852404 GT ./. chr1 67855661 . A . . LowGQX END=67855863 GT ./. chr1 67861179 . T . . LowGQX END=67861824 GT ./. chr1 67878818 . G . . LowGQX END=67878969 GT ./. chr1 67880847 . A . . LowGQX END=67881025 GT ./. chr1 67885670 . A . . LowGQX END=67885872 GT ./. chr1 67889881 . A . . LowGQX END=67890008 GT ./. chr1 67890566 . C . . LowGQX END=67890666 GT ./. chr1 67890764 . A . . LowGQX END=67890909 GT ./. chr1 67891816 . A . . LowGQX END=67891971 GT ./. chr1 67895669 . A . . LowGQX END=67895986 GT ./. chr1 68151150 . T . . LowGQX END=68151250 GT ./. chr1 68151649 . C . . LowGQX END=68151866 GT ./. chr1 68152031 . A . . LowGQX END=68152273 GT ./. chr1 68153342 . A . . LowGQX END=68153460 GT ./. chr1 68171132 . C . . LowGQX END=68171262 GT ./. chr1 68173215 . C . . LowGQX END=68173374 GT ./. chr1 68512289 . G . . LowGQX END=68512983 GT ./. chr1 68564313 . A . . LowGQX END=68564439 GT ./. chr1 68591907 . T . . LowGQX END=68592021 GT ./. chr1 68592713 . A . . LowGQX END=68592876 GT ./. chr1 68603461 . A . . LowGQX END=68603619 GT ./. chr1 68610244 . C . . LowGQX END=68610344 GT ./. chr1 68611550 . A . . LowGQX END=68611698 GT ./. chr1 68613801 . C . . LowGQX END=68613901 GT ./. chr1 68614244 . A . . LowGQX END=68614346 GT ./. chr1 68615869 . A . . LowGQX END=68616042 GT ./. chr1 68619198 . A . . LowGQX END=68619339 GT ./. chr1 68620780 . A . . LowGQX END=68620946 GT ./. chr1 68624804 . A . . LowGQX END=68624933 GT ./. chr1 68649198 . T . . LowGQX END=68649298 GT ./. chr1 68652254 . T . . LowGQX END=68652354 GT ./. chr1 68659632 . C . . LowGQX END=68659913 GT ./. chr1 68693885 . G . . LowGQX END=68693985 GT ./. chr1 68697386 . C . . LowGQX END=68697509 GT ./. chr1 68697875 . A . . LowGQX END=68697985 GT ./. chr1 68895408 . A . . LowGQX END=68895662 GT ./. chr1 68896697 . T . . LowGQX END=68896911 GT ./. chr1 68896914 . C . . LowGQX END=68897320 GT ./. chr1 68903819 . G . . LowGQX END=68904051 GT ./. chr1 68904574 . A . . LowGQX END=68904816 GT ./. chr1 68904823 . A . . LowGQX END=68905058 GT ./. chr1 68905193 . A . . LowGQX END=68905377 GT ./. chr1 68906485 . T . . LowGQX END=68906735 GT ./. chr1 68910163 . T . . LowGQX END=68910618 GT ./. chr1 68912342 . C . . LowGQX END=68912595 GT ./. chr1 68914256 . A . . LowGQX END=68914441 GT ./. chr1 68915527 . T . . LowGQX END=68915640 GT ./. chr1 68942613 . A . . LowGQX END=68942755 GT ./. chr1 68943468 . A . . LowGQX END=68943658 GT ./. chr1 68944825 . A . . LowGQX END=68945006 GT ./. chr1 68947121 . A . . LowGQX END=68947298 GT ./. chr1 68947728 . C . . LowGQX END=68948581 GT ./. chr1 68948922 . T . . LowGQX END=68949022 GT ./. chr1 68949631 . A . . LowGQX END=68949811 GT ./. chr1 68952594 . C . . LowGQX END=68952694 GT ./. chr1 68954055 . A . . LowGQX END=68954235 GT ./. chr1 68954547 . A . . LowGQX END=68954720 GT ./. chr1 68955133 . A . . LowGQX END=68955323 GT ./. chr1 68960111 . A . . LowGQX END=68960312 GT ./. chr1 68960313 . T . . LowGQX END=68960381;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 68962609 . G . . LowGQX END=68962709 GT ./. chr1 70034274 . T . . LowGQX END=70034374 GT ./. chr1 70144063 . G . . LowGQX END=70144163 GT ./. chr1 70181851 . A . . LowGQX END=70181951 GT ./. chr1 70225873 . G . . LowGQX END=70226079 GT ./. chr1 70257724 . A . . LowGQX END=70257846 GT ./. chr1 70291421 . C . . LowGQX END=70291521 GT ./. chr1 70300401 . T . . LowGQX END=70300558 GT ./. chr1 70303889 . T . . LowGQX END=70304041 GT ./. chr1 70304687 . T . . LowGQX END=70304787 GT ./. chr1 70339103 . T . . LowGQX END=70339203 GT ./. chr1 70397172 . T . . LowGQX END=70397272 GT ./. chr1 70445990 . C . . LowGQX END=70446150 GT ./. chr1 70451923 . A . . LowGQX END=70452072 GT ./. chr1 70460172 . T . . LowGQX END=70460331 GT ./. chr1 70477438 . T . . LowGQX END=70477612 GT ./. chr1 70478605 . A . . LowGQX END=70478775 GT ./. chr1 70482133 . T . . LowGQX END=70482233 GT ./. chr1 70484400 . A . . LowGQX END=70484504 GT ./. chr1 70486686 . A . . LowGQX END=70486815 GT ./. chr1 70488807 . A . . LowGQX END=70489060 GT ./. chr1 70493852 . A . . LowGQX END=70494057 GT ./. chr1 70501802 . A . . LowGQX END=70501918 GT ./. chr1 70502125 . A . . LowGQX END=70502310 GT ./. chr1 70503794 . A . . LowGQX END=70505479 GT ./. chr1 70509635 . A . . LowGQX END=70509780 GT ./. chr1 70518707 . A . . LowGQX END=70518831 GT ./. chr1 70541758 . A . . LowGQX END=70541984 GT ./. chr1 70555407 . T . . LowGQX END=70555558 GT ./. chr1 70573423 . T . . LowGQX END=70573523 GT ./. chr1 70587461 . A . . LowGQX END=70587621 GT ./. chr1 70611481 . T . . LowGQX END=70611591 GT ./. chr1 70614168 . A . . LowGQX END=70614358 GT ./. chr1 70616749 . C . . LowGQX END=70616900 GT ./. chr1 70618114 . A . . LowGQX END=70618274 GT ./. chr1 70621370 . A . . LowGQX END=70621482 GT ./. chr1 70625011 . A . . LowGQX END=70625124 GT ./. chr1 70639121 . A . . LowGQX END=70639221 GT ./. chr1 70639299 . A . . LowGQX END=70639399 GT ./. chr1 70641471 . T . . LowGQX END=70641668 GT ./. chr1 70644532 . A . . LowGQX END=70644679 GT ./. chr1 70646767 . A . . LowGQX END=70646895 GT ./. chr1 70650466 . A . . LowGQX END=70650600 GT ./. chr1 70652876 . A . . LowGQX END=70653035 GT ./. chr1 70654773 . A . . LowGQX END=70654959 GT ./. chr1 70671071 . A . . LowGQX END=70671226 GT ./. chr1 70687318 . C . . LowGQX END=70687525 GT ./. chr1 70694103 . A . . LowGQX END=70694241 GT ./. chr1 70694880 . G . . LowGQX END=70694980 GT ./. chr1 70696219 . C . . LowGQX END=70696319 GT ./. chr1 70696740 . T . . LowGQX END=70696840 GT ./. chr1 70697517 . C . . LowGQX END=70697617 GT ./. chr1 70697793 . A . . LowGQX END=70698063 GT ./. chr1 70700376 . C . . LowGQX END=70700476 GT ./. chr1 70701159 . T . . LowGQX END=70701259 GT ./. chr1 70703066 . A . . LowGQX END=70703238 GT ./. chr1 70705113 . T . . LowGQX END=70705213 GT ./. chr1 70710365 . A . . LowGQX END=70710501 GT ./. chr1 70712496 . G . . LowGQX END=70712596 GT ./. chr1 70715614 . T . . LowGQX END=70715733 GT ./. chr1 70716046 . A . . LowGQX END=70716189 GT ./. chr1 70716289 . A . . LowGQX END=70716491 GT ./. chr1 70728398 . A . . LowGQX END=70728533 GT ./. chr1 70736537 . A . . LowGQX END=70736642 GT ./. chr1 70740401 . A . . LowGQX END=70740504 GT ./. chr1 70742386 . T . . LowGQX END=70742538 GT ./. chr1 70758069 . A . . LowGQX END=70758259 GT ./. chr1 70761811 . A . . LowGQX END=70761947 GT ./. chr1 70766445 . A . . LowGQX END=70766625 GT ./. chr1 70771891 . A . . LowGQX END=70771991 GT ./. chr1 70779401 . T . . LowGQX END=70779501 GT ./. chr1 70781157 . A . . LowGQX END=70781257 GT ./. chr1 70790534 . A . . LowGQX END=70790643 GT ./. chr1 70801652 . A . . LowGQX END=70801812 GT ./. chr1 70819648 . C . . LowGQX END=70820094 GT ./. chr1 70820633 . A . . LowGQX END=70820894 GT ./. chr1 70831812 . C . . LowGQX END=70831912 GT ./. chr1 70831961 . A . . LowGQX END=70832061 GT ./. chr1 70832124 . T . . LowGQX END=70832224 GT ./. chr1 70833238 . T . . LowGQX END=70833412 GT ./. chr1 70877048 . C . . LowGQX END=70877318 GT ./. chr1 70881588 . C . . LowGQX END=70881772 GT ./. chr1 70883569 . T . . LowGQX END=70883767 GT ./. chr1 70887198 . G . . LowGQX END=70887410 GT ./. chr1 70889917 . G . . LowGQX END=70890151 GT ./. chr1 70895426 . A . . LowGQX END=70895586 GT ./. chr1 70895949 . A . . LowGQX END=70896129 GT ./. chr1 70897715 . T . . LowGQX END=70897970 GT ./. chr1 70899460 . A . . LowGQX END=70899684 GT ./. chr1 70900757 . T . . LowGQX END=70900912 GT ./. chr1 70904320 . C . . LowGQX END=70904551 GT ./. chr1 70904733 . C . . LowGQX END=70904862 GT ./. chr1 71318430 . T . . LowGQX END=71318583 GT ./. chr1 71328017 . T . . LowGQX END=71328117 GT ./. chr1 71331370 . A . . LowGQX END=71331519 GT ./. chr1 71334915 . G . . LowGQX END=71335015 GT ./. chr1 71349631 . G . . LowGQX END=71349810 GT ./. chr1 71351936 . T . . LowGQX END=71352036 GT ./. chr1 71418588 . T . . LowGQX END=71418745 GT ./. chr1 71419349 . T . . LowGQX END=71419509 GT ./. chr1 71437365 . A . . LowGQX END=71437465 GT ./. chr1 71439976 . T . . LowGQX END=71440076 GT ./. chr1 71477896 . T . . LowGQX END=71478170 GT ./. chr1 71512362 . A . . LowGQX END=71513263 GT ./. chr1 71530739 . G . . LowGQX END=71530839 GT ./. chr1 71531369 . A . . LowGQX END=71531469 GT ./. chr1 71532427 . A . . LowGQX END=71532620 GT ./. chr1 71533253 . T . . LowGQX END=71533464 GT ./. chr1 71534953 . A . . LowGQX END=71535053 GT ./. chr1 71536508 . A . . LowGQX END=71536682 GT ./. chr1 71537802 . A . . LowGQX END=71537982 GT ./. chr1 71538144 . A . . LowGQX END=71538244 GT ./. chr1 71542416 . T . . LowGQX END=71542570 GT ./. chr1 71544138 . A . . LowGQX END=71544251 GT ./. chr1 71544316 . T . . LowGQX END=71544416 GT ./. chr1 71546601 . T . . LowGQX END=71546701 GT ./. chr1 71873127 . A . . LowGQX END=71873256 GT ./. chr1 72058498 . A . . LowGQX END=72058654 GT ./. chr1 72076707 . A . . LowGQX END=72076832 GT ./. chr1 72163689 . A . . LowGQX END=72163825 GT ./. chr1 72241853 . A . . LowGQX END=72241983 GT ./. chr1 72400760 . A . . LowGQX END=72400997 GT ./. chr1 72748000 . A . . LowGQX END=72748180 GT ./. chr1 74492465 . A . . LowGQX END=74492656 GT ./. chr1 74506895 . A . . LowGQX END=74507620 GT ./. chr1 74540303 . A . . LowGQX END=74540477 GT ./. chr1 74549834 . C . . LowGQX END=74549934 GT ./. chr1 74574527 . T . . LowGQX END=74574627 GT ./. chr1 74574876 . T . . LowGQX END=74574976 GT ./. chr1 74574982 . T . . LowGQX END=74575266 GT ./. chr1 74610127 . A . . LowGQX END=74610230 GT ./. chr1 74621375 . T . . LowGQX END=74621553 GT ./. chr1 74646393 . C . . LowGQX END=74646493 GT ./. chr1 74648220 . A . . LowGQX END=74648548 GT ./. chr1 74649118 . A . . LowGQX END=74649371 GT ./. chr1 74663961 . C . . LowGQX END=74664111 GT ./. chr1 74665346 . A . . LowGQX END=74665530 GT ./. chr1 74666353 . A . . LowGQX END=74666453 GT ./. chr1 74666940 . C . . LowGQX END=74667099 GT ./. chr1 74670073 . A . . LowGQX END=74671519 GT ./. chr1 74699025 . A . . LowGQX END=74699125 GT ./. chr1 74701054 . T . . LowGQX END=74701206 GT ./. chr1 74701784 . A . . LowGQX END=74701944 GT ./. chr1 74705592 . C . . LowGQX END=74705692 GT ./. chr1 74715136 . T . . LowGQX END=74715236 GT ./. chr1 74716354 . A . . LowGQX END=74716456 GT ./. chr1 74737280 . A . . LowGQX END=74737395 GT ./. chr1 74797132 . A . . LowGQX END=74797235 GT ./. chr1 74801693 . A . . LowGQX END=74801873 GT ./. chr1 74808524 . A . . LowGQX END=74808673 GT ./. chr1 74808757 . A . . LowGQX END=74808917 GT ./. chr1 74818948 . A . . LowGQX END=74819048 GT ./. chr1 74819662 . A . . LowGQX END=74819816 GT ./. chr1 74832934 . A . . LowGQX END=74833034 GT ./. chr1 74833520 . T . . LowGQX END=74833671 GT ./. chr1 74834703 . C . . LowGQX END=74834803 GT ./. chr1 74834870 . A . . LowGQX END=74834970 GT ./. chr1 74835073 . A . . LowGQX END=74835272 GT ./. chr1 74835970 . A . . LowGQX END=74836096 GT ./. chr1 74841218 . A . . LowGQX END=74841318 GT ./. chr1 74867473 . T . . LowGQX END=74867642 GT ./. chr1 74883806 . T . . LowGQX END=74883906 GT ./. chr1 74901741 . T . . LowGQX END=74901841 GT ./. chr1 74902135 . G . . LowGQX END=74902286 GT ./. chr1 74905172 . A . . LowGQX END=74905309 GT ./. chr1 74929123 . A . . LowGQX END=74929237 GT ./. chr1 74930318 . G . . LowGQX END=74930427 GT ./. chr1 74937775 . T . . LowGQX END=74937886 GT ./. chr1 74940978 . C . . LowGQX END=74941495 GT ./. chr1 74945836 . C . . LowGQX END=74946653 GT ./. chr1 74948940 . T . . LowGQX END=74949040 GT ./. chr1 74954853 . G . . LowGQX END=74954953 GT ./. chr1 74957779 . A . . LowGQX END=74957953 GT ./. chr1 75005908 . A . . LowGQX END=75006008 GT ./. chr1 75009528 . A . . LowGQX END=75009679 GT ./. chr1 75036799 . T . . LowGQX END=75039178 GT ./. chr1 75042550 . A . . LowGQX END=75042650 GT ./. chr1 75055297 . C . . LowGQX END=75055767 GT ./. chr1 75065377 . G . . LowGQX END=75065618 GT ./. chr1 75072283 . A . . LowGQX END=75072589 GT ./. chr1 75078305 . A . . LowGQX END=75078496 GT ./. chr1 75086416 . A . . LowGQX END=75086601 GT ./. chr1 75097395 . A . . LowGQX END=75097615 GT ./. chr1 75100305 . A . . LowGQX END=75100405 GT ./. chr1 75101962 . A . . LowGQX END=75102125 GT ./. chr1 75106982 . A . . LowGQX END=75107193 GT ./. chr1 75108639 . C . . LowGQX END=75108797 GT ./. chr1 75112309 . G . . LowGQX END=75112479 GT ./. chr1 75114903 . T . . LowGQX END=75115003 GT ./. chr1 75139143 . A . . LowGQX END=75139243 GT ./. chr1 75171978 . C . . LowGQX END=75172144 GT ./. chr1 75172511 . T . . LowGQX END=75172681 GT ./. chr1 75172785 . A . . LowGQX END=75172945 GT ./. chr1 75175780 . A . . LowGQX END=75175934 GT ./. chr1 75180239 . A . . LowGQX END=75180339 GT ./. chr1 75184891 . A . . LowGQX END=75185059 GT ./. chr1 75188770 . A . . LowGQX END=75188957 GT ./. chr1 75190393 . A . . LowGQX END=75190508 GT ./. chr1 75198927 . C . . LowGQX END=75199105 GT ./. chr1 75202217 . T . . LowGQX END=75202317 GT ./. chr1 75204372 . A . . LowGQX END=75204475 GT ./. chr1 75214363 . T . . LowGQX END=75214521 GT ./. chr1 75217974 . A . . LowGQX END=75218112 GT ./. chr1 75229576 . A . . LowGQX END=75229800 GT ./. chr1 75596349 . C . . LowGQX END=75596479 GT ./. chr1 75602237 . T . . LowGQX END=75602426 GT ./. chr1 75602734 . G . . LowGQX END=75602998 GT ./. chr1 75606619 . T . . LowGQX END=75606843 GT ./. chr1 75608752 . T . . LowGQX END=75609075 GT ./. chr1 75609479 . G . . LowGQX END=75609690 GT ./. chr1 75614221 . A . . LowGQX END=75614409 GT ./. chr1 75622527 . C . . LowGQX END=75622813 GT ./. chr1 75626453 . A . . LowGQX END=75626632 GT ./. chr1 75669411 . T . . LowGQX END=75669519 GT ./. chr1 75672290 . T . . LowGQX END=75672407 GT ./. chr1 75677146 . T . . LowGQX END=75677246 GT ./. chr1 75679385 . C . . LowGQX END=75679485 GT ./. chr1 75679590 . T . . LowGQX END=75679690 GT ./. chr1 75680277 . C . . LowGQX END=75680377 GT ./. chr1 75681437 . A . . LowGQX END=75681597 GT ./. chr1 75683489 . T . . LowGQX END=75683649 GT ./. chr1 75684173 . A . . LowGQX END=75684440 GT ./. chr1 75684936 . A . . LowGQX END=75685036 GT ./. chr1 75685482 . T . . LowGQX END=75685582 GT ./. chr1 75688044 . A . . LowGQX END=75688148 GT ./. chr1 75693409 . A . . LowGQX END=75693589 GT ./. chr1 75699669 . A . . LowGQX END=75699829 GT ./. chr1 75702664 . T . . LowGQX END=75702764 GT ./. chr1 75704196 . A . . LowGQX END=75704324 GT ./. chr1 75707667 . T . . LowGQX END=75707767 GT ./. chr1 75708569 . A . . LowGQX END=75708699 GT ./. chr1 75716823 . G . . LowGQX END=75716988 GT ./. chr1 75740636 . T . . LowGQX END=75740736 GT ./. chr1 75766284 . T . . LowGQX END=75766384 GT ./. chr1 75805244 . T . . LowGQX END=75805344 GT ./. chr1 75819627 . C . . LowGQX END=75819727 GT ./. chr1 75822833 . T . . LowGQX END=75822933 GT ./. chr1 75862245 . T . . LowGQX END=75862345 GT ./. chr1 75868067 . C . . LowGQX END=75868181 GT ./. chr1 76007077 . A . . LowGQX END=76007177 GT ./. chr1 76081445 . C . . LowGQX END=76081605 GT ./. chr1 76143364 . A . . LowGQX END=76143545 GT ./. chr1 76190338 . C . . LowGQX END=76190556 GT ./. chr1 76194073 . G . . LowGQX END=76194225 GT ./. chr1 76198278 . A . . LowGQX END=76198659 GT ./. chr1 76198735 . G . . LowGQX END=76198835 GT ./. chr1 76199162 . T . . LowGQX END=76199365 GT ./. chr1 76200425 . A . . LowGQX END=76200608 GT ./. chr1 76205614 . A . . LowGQX END=76205847 GT ./. chr1 76211440 . A . . LowGQX END=76211651 GT ./. chr1 76215053 . T . . LowGQX END=76215296 GT ./. chr1 76216085 . G . . LowGQX END=76216283 GT ./. chr1 76226756 . T . . LowGQX END=76227131 GT ./. chr1 76228326 . A . . LowGQX END=76228500 GT ./. chr1 76234833 . C . . LowGQX END=76234933 GT ./. chr1 76251909 . C . . LowGQX END=76252009 GT ./. chr1 76252687 . T . . LowGQX END=76252846 GT ./. chr1 76253180 . A . . LowGQX END=76253292 GT ./. chr1 76253566 . A . . LowGQX END=76253666 GT ./. chr1 76254842 . A . . LowGQX END=76255044 GT ./. chr1 76255148 . A . . LowGQX END=76255248 GT ./. chr1 76255585 . C . . LowGQX END=76255787 GT ./. chr1 76256947 . G . . LowGQX END=76257047 GT ./. chr1 76257144 . A . . LowGQX END=76257259 GT ./. chr1 76257864 . A . . LowGQX END=76257994 GT ./. chr1 76259767 . A . . LowGQX END=76259921 GT ./. chr1 76260193 . A . . LowGQX END=76260338 GT ./. chr1 76260878 . T . . LowGQX END=76260978 GT ./. chr1 76261027 . T . . LowGQX END=76261127 GT ./. chr1 76262669 . G . . LowGQX END=76262917 GT ./. chr1 76269414 . A . . LowGQX END=76269601 GT ./. chr1 76272634 . T . . LowGQX END=76272829 GT ./. chr1 76276380 . A . . LowGQX END=76276540 GT ./. chr1 76280644 . A . . LowGQX END=76280824 GT ./. chr1 76282056 . A . . LowGQX END=76282234 GT ./. chr1 76288072 . G . . LowGQX END=76288269 GT ./. chr1 76313878 . T . . LowGQX END=76313978 GT ./. chr1 76333127 . T . . LowGQX END=76333287 GT ./. chr1 76342604 . A . . LowGQX END=76342704 GT ./. chr1 76343812 . T . . LowGQX END=76344006 GT ./. chr1 76344675 . A . . LowGQX END=76344855 GT ./. chr1 76345683 . T . . LowGQX END=76345841 GT ./. chr1 76346929 . A . . LowGQX END=76347109 GT ./. chr1 76349304 . A . . LowGQX END=76349509 GT ./. chr1 76354884 . T . . LowGQX END=76355057 GT ./. chr1 76356379 . A . . LowGQX END=76356559 GT ./. chr1 76363590 . A . . LowGQX END=76363769 GT ./. chr1 76365240 . A . . LowGQX END=76365451 GT ./. chr1 76378369 . T . . LowGQX END=76378575 GT ./. chr1 76384635 . T . . LowGQX END=76384846 GT ./. chr1 76387763 . A . . LowGQX END=76388047 GT ./. chr1 76397574 . A . . LowGQX END=76397979 GT ./. chr1 76540517 . C . . LowGQX END=76540617 GT ./. chr1 76608505 . T . . LowGQX END=76608605 GT ./. chr1 76771558 . G . . LowGQX END=76771658 GT ./. chr1 76773541 . A . . LowGQX END=76773641 GT ./. chr1 76775614 . T . . LowGQX END=76775714 GT ./. chr1 76779310 . A . . LowGQX END=76779410 GT ./. chr1 76779488 . A . . LowGQX END=76779687 GT ./. chr1 76877677 . T . . LowGQX END=76878105 GT ./. chr1 76878636 . A . . LowGQX END=76878736 GT ./. chr1 77042486 . A . . LowGQX END=77042586 GT ./. chr1 77093135 . A . . LowGQX END=77093247 GT ./. chr1 77094303 . A . . LowGQX END=77094503 GT ./. chr1 77333259 . A . . LowGQX END=77333419 GT ./. chr1 77334180 . A . . LowGQX END=77334430 GT ./. chr1 77509887 . A . . LowGQX END=77510301 GT ./. chr1 77515941 . A . . LowGQX END=77516053 GT ./. chr1 77528658 . A . . LowGQX END=77528894 GT ./. chr1 77558057 . G . . LowGQX END=77558227 GT ./. chr1 77587953 . T . . LowGQX END=77588053 GT ./. chr1 77594799 . A . . LowGQX END=77595354 GT ./. chr1 77620120 . T . . LowGQX END=77620330 GT ./. chr1 77626978 . A . . LowGQX END=77627093 GT ./. chr1 77627227 . A . . LowGQX END=77627399 GT ./. chr1 77629479 . G . . LowGQX END=77629630 GT ./. chr1 77632402 . A . . LowGQX END=77632562 GT ./. chr1 77634943 . A . . LowGQX END=77635123 GT ./. chr1 77672321 . T . . LowGQX END=77672421 GT ./. chr1 77676098 . G . . LowGQX END=77676198 GT ./. chr1 77684992 . T . . LowGQX END=77685143 GT ./. chr1 77747979 . A . . LowGQX END=77748079 GT ./. chr1 77752624 . A . . LowGQX END=77752815 GT ./. chr1 77759476 . A . . LowGQX END=77759676 GT ./. chr1 77763242 . A . . LowGQX END=77763416 GT ./. chr1 77763517 . A . . LowGQX END=77763635 GT ./. chr1 77779480 . T . . LowGQX END=77779580 GT ./. chr1 77806060 . A . . LowGQX END=77806256 GT ./. chr1 77876662 . C . . LowGQX END=77876762 GT ./. chr1 77883262 . G . . LowGQX END=77883413 GT ./. chr1 77948974 . T . . LowGQX END=77949074 GT ./. chr1 77951911 . T . . LowGQX END=77952066 GT ./. chr1 77984247 . A . . LowGQX END=77984415 GT ./. chr1 77987460 . T . . LowGQX END=77987631 GT ./. chr1 78001530 . A . . LowGQX END=78001726 GT ./. chr1 78024272 . T . . LowGQX END=78024372 GT ./. chr1 78031323 . T . . LowGQX END=78031472 GT ./. chr1 78031764 . A . . LowGQX END=78031869 GT ./. chr1 78033975 . A . . LowGQX END=78034154 GT ./. chr1 78041751 . A . . LowGQX END=78041908 GT ./. chr1 78044457 . A . . LowGQX END=78044557 GT ./. chr1 78045149 . A . . LowGQX END=78045370 GT ./. chr1 78046669 . G . . LowGQX END=78046769 GT ./. chr1 78047459 . A . . LowGQX END=78047579 GT ./. chr1 78047662 . A . . LowGQX END=78047814 GT ./. chr1 78050200 . A . . LowGQX END=78050343 GT ./. chr1 78097525 . T . . LowGQX END=78099042 GT ./. chr1 78105095 . C . . LowGQX END=78105195 GT ./. chr1 78163000 . A . . LowGQX END=78163162 GT ./. chr1 78163533 . A . . LowGQX END=78163633 GT ./. chr1 78167052 . A . . LowGQX END=78167212 GT ./. chr1 78177418 . C . . LowGQX END=78177588 GT ./. chr1 78178822 . A . . LowGQX END=78179033 GT ./. chr1 78180297 . A . . LowGQX END=78180487 GT ./. chr1 78181425 . A . . LowGQX END=78181556 GT ./. chr1 78183550 . A . . LowGQX END=78183735 GT ./. chr1 78184199 . A . . LowGQX END=78184354 GT ./. chr1 78186765 . A . . LowGQX END=78186924 GT ./. chr1 78187454 . T . . LowGQX END=78187614 GT ./. chr1 78187707 . A . . LowGQX END=78187884 GT ./. chr1 78188964 . T . . LowGQX END=78189131 GT ./. chr1 78191305 . A . . LowGQX END=78191450 GT ./. chr1 78193978 . A . . LowGQX END=78194400 GT ./. chr1 78195535 . A . . LowGQX END=78195635 GT ./. chr1 78196301 . A . . LowGQX END=78196419 GT ./. chr1 78199960 . T . . LowGQX END=78200117 GT ./. chr1 78201739 . A . . LowGQX END=78201846 GT ./. chr1 78204948 . A . . LowGQX END=78205105 GT ./. chr1 78206490 . G . . LowGQX END=78206644 GT ./. chr1 78207038 . T . . LowGQX END=78207138 GT ./. chr1 78207300 . A . . LowGQX END=78207436 GT ./. chr1 78211017 . G . . LowGQX END=78211177 GT ./. chr1 78245272 . G . . LowGQX END=78245432 GT ./. chr1 78248921 . A . . LowGQX END=78249039 GT ./. chr1 78267014 . A . . LowGQX END=78267214 GT ./. chr1 78268953 . A . . LowGQX END=78269094 GT ./. chr1 78272658 . A . . LowGQX END=78272789 GT ./. chr1 78279417 . A . . LowGQX END=78279555 GT ./. chr1 78280791 . A . . LowGQX END=78280919 GT ./. chr1 78308990 . A . . LowGQX END=78309095 GT ./. chr1 78324621 . A . . LowGQX END=78324782 GT ./. chr1 78324986 . G . . LowGQX END=78325086 GT ./. chr1 78325663 . T . . LowGQX END=78325819 GT ./. chr1 78326907 . A . . LowGQX END=78327010 GT ./. chr1 78329577 . A . . LowGQX END=78329757 GT ./. chr1 78332000 . T . . LowGQX END=78332100 GT ./. chr1 78338635 . A . . LowGQX END=78338808 GT ./. chr1 78340529 . A . . LowGQX END=78340752 GT ./. chr1 78381741 . T . . LowGQX END=78381870 GT ./. chr1 78383200 . T . . LowGQX END=78383494 GT ./. chr1 78383594 . T . . LowGQX END=78384010 GT ./. chr1 78389801 . C . . LowGQX END=78389961 GT ./. chr1 78390822 . A . . LowGQX END=78390966 GT ./. chr1 78392048 . A . . LowGQX END=78392348 GT ./. chr1 78392350 . G . . LowGQX END=78392629 GT ./. chr1 78394950 . C . . LowGQX END=78395241 GT ./. chr1 78398916 . T . . LowGQX END=78399216 GT ./. chr1 78401457 . G . . LowGQX END=78401781 GT ./. chr1 78407657 . C . . LowGQX END=78407945 GT ./. chr1 78408095 . T . . LowGQX END=78408642 GT ./. chr1 78413168 . A . . LowGQX END=78413268 GT ./. chr1 78414406 . T . . LowGQX END=78414506 GT ./. chr1 78414529 . G . . LowGQX END=78414629 GT ./. chr1 78414838 . A . . LowGQX END=78414988 GT ./. chr1 78420928 . T . . LowGQX END=78421028 GT ./. chr1 78422255 . A . . LowGQX END=78422388 GT ./. chr1 78425799 . T . . LowGQX END=78426233 GT ./. chr1 78428453 . A . . LowGQX END=78428618 GT ./. chr1 78429257 . G . . LowGQX END=78429403 GT ./. chr1 78429745 . A . . LowGQX END=78429850 GT ./. chr1 78429937 . A . . LowGQX END=78430044 GT ./. chr1 78430329 . A . . LowGQX END=78430435 GT ./. chr1 78430553 . A . . LowGQX END=78430656 GT ./. chr1 78430751 . A . . LowGQX END=78430918 GT ./. chr1 78432357 . T . . LowGQX END=78432457 GT ./. chr1 78432554 . G . . LowGQX END=78432654 GT ./. chr1 78432710 . A . . LowGQX END=78432810 GT ./. chr1 78433281 . G . . LowGQX END=78433381 GT ./. chr1 78433759 . C . . LowGQX END=78433977 GT ./. chr1 78434687 . A . . LowGQX END=78434787 GT ./. chr1 78435605 . T . . LowGQX END=78435705 GT ./. chr1 78444517 . A . . LowGQX END=78444691 GT ./. chr1 78470793 . A . . LowGQX END=78471008 GT ./. chr1 78478733 . A . . LowGQX END=78479306 GT ./. chr1 78481696 . A . . LowGQX END=78481934 GT ./. chr1 78511757 . C . . LowGQX END=78512087 GT ./. chr1 78546357 . A . . LowGQX END=78546547 GT ./. chr1 78560634 . A . . LowGQX END=78560819 GT ./. chr1 78578128 . A . . LowGQX END=78578228 GT ./. chr1 78585075 . A . . LowGQX END=78585186 GT ./. chr1 78591556 . T . . LowGQX END=78591656 GT ./. chr1 78601274 . A . . LowGQX END=78601464 GT ./. chr1 78958427 . C . . LowGQX END=78959229 GT ./. chr1 78963487 . A . . LowGQX END=78963645 GT ./. chr1 78997799 . T . . LowGQX END=78997959 GT ./. chr1 79002089 . A . . LowGQX END=79002375 GT ./. chr1 79093600 . A . . LowGQX END=79094081 GT ./. chr1 79094611 . A . . LowGQX END=79094764 GT ./. chr1 79095403 . A . . LowGQX END=79095603 GT ./. chr1 79095649 . T . . LowGQX END=79095749 GT ./. chr1 79101020 . A . . LowGQX END=79101200 GT ./. chr1 79102704 . G . . LowGQX END=79102915 GT ./. chr1 79106704 . A . . LowGQX END=79106809 GT ./. chr1 79107118 . A . . LowGQX END=79107297 GT ./. chr1 79107428 . T . . LowGQX END=79107528 GT ./. chr1 79115879 . G . . LowGQX END=79116340 GT ./. chr1 79119846 . T . . LowGQX END=79119997 GT ./. chr1 79120697 . A . . LowGQX END=79120897 GT ./. chr1 79121045 . A . . LowGQX END=79121199 GT ./. chr1 79124995 . A . . LowGQX END=79125171 GT ./. chr1 79126237 . A . . LowGQX END=79126466 GT ./. chr1 79128387 . A . . LowGQX END=79128603 GT ./. chr1 79129424 . A . . LowGQX END=79129524 GT ./. chr1 79355455 . T . . LowGQX END=79355555 GT ./. chr1 79356737 . G . . LowGQX END=79356921 GT ./. chr1 79357207 . A . . LowGQX END=79357380 GT ./. chr1 79358779 . T . . LowGQX END=79358931 GT ./. chr1 79383303 . T . . LowGQX END=79383403 GT ./. chr1 79383513 . A . . LowGQX END=79383738 GT ./. chr1 79385866 . A . . LowGQX END=79386074 GT ./. chr1 79387296 . A . . LowGQX END=79387474 GT ./. chr1 79392569 . A . . LowGQX END=79392779 GT ./. chr1 79401928 . T . . LowGQX END=79402148 GT ./. chr1 79403490 . A . . LowGQX END=79403678 GT ./. chr1 79403763 . A . . LowGQX END=79403967 GT ./. chr1 79404801 . G . . LowGQX END=79404959 GT ./. chr1 79411957 . A . . LowGQX END=79412114 GT ./. chr1 79470753 . A . . LowGQX END=79470907 GT ./. chr1 79472219 . T . . LowGQX END=79472379 GT ./. chr1 79474599 . A . . LowGQX END=79474699 GT ./. chr1 82302598 . G . . LowGQX END=82302757 GT ./. chr1 82372700 . A . . LowGQX END=82372918 GT ./. chr1 82402410 . A . . LowGQX END=82402524 GT ./. chr1 82407674 . C . . LowGQX END=82407774 GT ./. chr1 82408453 . A . . LowGQX END=82408553 GT ./. chr1 82408651 . A . . LowGQX END=82409456 GT ./. chr1 82415871 . A . . LowGQX END=82416169 GT ./. chr1 82416700 . A . . LowGQX END=82416808 GT ./. chr1 82417639 . A . . LowGQX END=82417829 GT ./. chr1 82418640 . C . . LowGQX END=82418740 GT ./. chr1 82421559 . A . . LowGQX END=82421747 GT ./. chr1 82431740 . A . . LowGQX END=82431870 GT ./. chr1 82432086 . A . . LowGQX END=82432296 GT ./. chr1 82433697 . T . . LowGQX END=82433918 GT ./. chr1 82434860 . A . . LowGQX END=82435074 GT ./. chr1 82435925 . A . . LowGQX END=82436285 GT ./. chr1 82437520 . T . . LowGQX END=82437620 GT ./. chr1 82445549 . A . . LowGQX END=82445649 GT ./. chr1 82446451 . C . . LowGQX END=82446551 GT ./. chr1 82446772 . A . . LowGQX END=82446872 GT ./. chr1 82447490 . A . . LowGQX END=82447700 GT ./. chr1 82450265 . A . . LowGQX END=82450398 GT ./. chr1 82450941 . A . . LowGQX END=82451042 GT ./. chr1 82452584 . G . . LowGQX END=82452714 GT ./. chr1 82452949 . A . . LowGQX END=82453114 GT ./. chr1 82453452 . A . . LowGQX END=82453612 GT ./. chr1 82455310 . A . . LowGQX END=82455410 GT ./. chr1 82456073 . A . . LowGQX END=82456832 GT ./. chr1 82459676 . G . . LowGQX END=82459776 GT ./. chr1 84335593 . G . . LowGQX END=84335768 GT ./. chr1 84348624 . G . . LowGQX END=84348822 GT ./. chr1 84352915 . T . . LowGQX END=84353015 GT ./. chr1 84355582 . A . . LowGQX END=84355682 GT ./. chr1 84356002 . A . . LowGQX END=84356167 GT ./. chr1 84365796 . T . . LowGQX END=84365896 GT ./. chr1 84369700 . T . . LowGQX END=84369853 GT ./. chr1 84371970 . A . . LowGQX END=84372250 GT ./. chr1 84373134 . C . . LowGQX END=84373347 GT ./. chr1 84376846 . A . . LowGQX END=84377049 GT ./. chr1 84383281 . C . . LowGQX END=84383381 GT ./. chr1 84385380 . A . . LowGQX END=84385520 GT ./. chr1 84386757 . G . . LowGQX END=84386857 GT ./. chr1 84386928 . A . . LowGQX END=84387080 GT ./. chr1 84394817 . A . . LowGQX END=84394917 GT ./. chr1 84399289 . A . . LowGQX END=84399452 GT ./. chr1 84403533 . A . . LowGQX END=84403702 GT ./. chr1 84408144 . A . . LowGQX END=84408365 GT ./. chr1 84412805 . A . . LowGQX END=84412995 GT ./. chr1 84414295 . A . . LowGQX END=84414395 GT ./. chr1 84415496 . G . . LowGQX END=84415672 GT ./. chr1 84417526 . A . . LowGQX END=84417662 GT ./. chr1 84417833 . T . . LowGQX END=84417933 GT ./. chr1 84464613 . C . . LowGQX END=84464833 GT ./. chr1 84543982 . T . . LowGQX END=84544082 GT ./. chr1 84610023 . A . . LowGQX END=84610243 GT ./. chr1 84630051 . G . . LowGQX END=84630151 GT ./. chr1 84630643 . T . . LowGQX END=84630743 GT ./. chr1 84638974 . A . . LowGQX END=84639074 GT ./. chr1 84640618 . C . . LowGQX END=84640778 GT ./. chr1 84641436 . A . . LowGQX END=84641536 GT ./. chr1 84644717 . G . . LowGQX END=84644941 GT ./. chr1 84647327 . G . . LowGQX END=84647427 GT ./. chr1 84647881 . A . . LowGQX END=84648014 GT ./. chr1 84649718 . A . . LowGQX END=84649821 GT ./. chr1 84650720 . T . . LowGQX END=84650931 GT ./. chr1 84662297 . A . . LowGQX END=84662428 GT ./. chr1 84663410 . A . . LowGQX END=84663510 GT ./. chr1 84668364 . A . . LowGQX END=84668491 GT ./. chr1 84670119 . C . . LowGQX END=84670219 GT ./. chr1 84679834 . A . . LowGQX END=84680003 GT ./. chr1 84700861 . A . . LowGQX END=84701031 GT ./. chr1 84764136 . C . . LowGQX END=84764296 GT ./. chr1 84765264 . A . . LowGQX END=84765364 GT ./. chr1 84768879 . T . . LowGQX END=84768979 GT ./. chr1 84791318 . A . . LowGQX END=84791434 GT ./. chr1 84810518 . T . . LowGQX END=84810957 GT ./. chr1 84815312 . A . . LowGQX END=84815460 GT ./. chr1 84853954 . G . . LowGQX END=84854054 GT ./. chr1 84864247 . A . . LowGQX END=84864373 GT ./. chr1 84867583 . G . . LowGQX END=84867783 GT ./. chr1 84874111 . T . . LowGQX END=84874211 GT ./. chr1 84876520 . G . . LowGQX END=84876710 GT ./. chr1 84878031 . G . . LowGQX END=84878232 GT ./. chr1 84880209 . A . . LowGQX END=84880554 GT ./. chr1 84944963 . C . . LowGQX END=84945195 GT ./. chr1 84946618 . T . . LowGQX END=84946718 GT ./. chr1 84948596 . A . . LowGQX END=84948703 GT ./. chr1 84955314 . A . . LowGQX END=84955414 GT ./. chr1 84956000 . A . . LowGQX END=84956158 GT ./. chr1 84960994 . T . . LowGQX END=84961148 GT ./. chr1 84961563 . A . . LowGQX END=84961749 GT ./. chr1 84961925 . A . . LowGQX END=84962056 GT ./. chr1 84963083 . T . . LowGQX END=84963183 GT ./. chr1 84967526 . T . . LowGQX END=84967656 GT ./. chr1 84971625 . C . . LowGQX END=84971785 GT ./. chr1 84981977 . A . . LowGQX END=84982137 GT ./. chr1 84986268 . T . . LowGQX END=84986428 GT ./. chr1 84988073 . A . . LowGQX END=84988191 GT ./. chr1 84991356 . T . . LowGQX END=84991509 GT ./. chr1 84991528 . G . . LowGQX END=84991810 GT ./. chr1 84998543 . C . . LowGQX END=84998658 GT ./. chr1 84999312 . A . . LowGQX END=84999471 GT ./. chr1 85009885 . A . . LowGQX END=85009988 GT ./. chr1 85011247 . T . . LowGQX END=85011443 GT ./. chr1 85014469 . C . . LowGQX END=85014648 GT ./. chr1 85016115 . A . . LowGQX END=85016215 GT ./. chr1 85018658 . A . . LowGQX END=85018813 GT ./. chr1 85020680 . G . . LowGQX END=85020885 GT ./. chr1 85028938 . A . . LowGQX END=85029104 GT ./. chr1 85029366 . T . . LowGQX END=85029518 GT ./. chr1 85031502 . A . . LowGQX END=85031698 GT ./. chr1 85035542 . A . . LowGQX END=85035862 GT ./. chr1 85036263 . A . . LowGQX END=85036406 GT ./. chr1 85039868 . A . . LowGQX END=85040101 GT ./. chr1 85096296 . G . . LowGQX END=85096571 GT ./. chr1 85097020 . G . . LowGQX END=85097120 GT ./. chr1 85097292 . C . . LowGQX END=85097392 GT ./. chr1 85113114 . G . . LowGQX END=85113293 GT ./. chr1 85115575 . T . . LowGQX END=85115675 GT ./. chr1 85116008 . T . . LowGQX END=85116213 GT ./. chr1 85117564 . A . . LowGQX END=85117683 GT ./. chr1 85121147 . C . . LowGQX END=85121272 GT ./. chr1 85121513 . A . . LowGQX END=85121691 GT ./. chr1 85122029 . A . . LowGQX END=85122170 GT ./. chr1 85123999 . A . . LowGQX END=85124154 GT ./. chr1 85127879 . A . . LowGQX END=85128061 GT ./. chr1 85128126 . A . . LowGQX END=85128226 GT ./. chr1 85130098 . A . . LowGQX END=85130238 GT ./. chr1 85131802 . C . . LowGQX END=85131962 GT ./. chr1 85135362 . A . . LowGQX END=85135579 GT ./. chr1 85136327 . A . . LowGQX END=85136501 GT ./. chr1 85136832 . T . . LowGQX END=85136932 GT ./. chr1 85279527 . G . . LowGQX END=85279857 GT ./. chr1 85331066 . A . . LowGQX END=85331806 GT ./. chr1 85392337 . T . . LowGQX END=85392437 GT ./. chr1 85395239 . A . . LowGQX END=85395365 GT ./. chr1 85397043 . A . . LowGQX END=85397254 GT ./. chr1 85403436 . A . . LowGQX END=85403563 GT ./. chr1 85403662 . A . . LowGQX END=85403768 GT ./. chr1 85405234 . A . . LowGQX END=85405414 GT ./. chr1 85406560 . A . . LowGQX END=85406677 GT ./. chr1 85412714 . A . . LowGQX END=85412818 GT ./. chr1 85417924 . G . . LowGQX END=85418025 GT ./. chr1 85418122 . T . . LowGQX END=85418222 GT ./. chr1 85422082 . A . . LowGQX END=85422270 GT ./. chr1 85424190 . T . . LowGQX END=85424388 GT ./. chr1 85431230 . A . . LowGQX END=85431394 GT ./. chr1 85462468 . A . . LowGQX END=85462568 GT ./. chr1 85484804 . A . . LowGQX END=85484943 GT ./. chr1 85486751 . A . . LowGQX END=85486962 GT ./. chr1 85487751 . A . . LowGQX END=85487878 GT ./. chr1 85487920 . C . . LowGQX END=85488086 GT ./. chr1 85491564 . T . . LowGQX END=85491774 GT ./. chr1 85491833 . C . . LowGQX END=85491970 GT ./. chr1 85494787 . A . . LowGQX END=85494891 GT ./. chr1 85498377 . A . . LowGQX END=85498478 GT ./. chr1 85498548 . C . . LowGQX END=85498648 GT ./. chr1 85499779 . A . . LowGQX END=85499937 GT ./. chr1 85506671 . A . . LowGQX END=85506863 GT ./. chr1 85510814 . A . . LowGQX END=85511046 GT ./. chr1 85537553 . A . . LowGQX END=85537707 GT ./. chr1 85538655 . A . . LowGQX END=85538807 GT ./. chr1 85546905 . T . . LowGQX END=85547101 GT ./. chr1 85547981 . A . . LowGQX END=85548141 GT ./. chr1 85550227 . A . . LowGQX END=85550381 GT ./. chr1 85551512 . A . . LowGQX END=85551716 GT ./. chr1 85555797 . A . . LowGQX END=85555918 GT ./. chr1 85559139 . A . . LowGQX END=85559334 GT ./. chr1 85559435 . C . . LowGQX END=85559535 GT ./. chr1 85560112 . A . . LowGQX END=85560241 GT ./. chr1 85561609 . T . . LowGQX END=85561709 GT ./. chr1 85563246 . T . . LowGQX END=85563346 GT ./. chr1 85564211 . A . . LowGQX END=85564381 GT ./. chr1 85570194 . T . . LowGQX END=85570294 GT ./. chr1 85573714 . A . . LowGQX END=85573863 GT ./. chr1 85575725 . C . . LowGQX END=85575825 GT ./. chr1 85583410 . A . . LowGQX END=85583545 GT ./. chr1 85587416 . A . . LowGQX END=85587516 GT ./. chr1 85589802 . A . . LowGQX END=85589937 GT ./. chr1 85592192 . A . . LowGQX END=85592401 GT ./. chr1 85594387 . T . . LowGQX END=85594539 GT ./. chr1 85595671 . A . . LowGQX END=85595802 GT ./. chr1 85598536 . A . . LowGQX END=85598684 GT ./. chr1 85624422 . A . . LowGQX END=85624942 GT ./. chr1 85630208 . C . . LowGQX END=85630441 GT ./. chr1 85634686 . T . . LowGQX END=85634909 GT ./. chr1 85643828 . C . . LowGQX END=85643956 GT ./. chr1 85647733 . T . . LowGQX END=85648884 GT ./. chr1 85655739 . C . . LowGQX END=85656436 GT ./. chr1 85665924 . A . . LowGQX END=85666680 GT ./. chr1 85718240 . C . . LowGQX END=85718399 GT ./. chr1 85723090 . G . . LowGQX END=85723190 GT ./. chr1 85724205 . A . . LowGQX END=85724408 GT ./. chr1 85725039 . A . . LowGQX END=85725319 GT ./. chr1 85733308 . T . . LowGQX END=85733668 GT ./. chr1 85736299 . A . . LowGQX END=85736592 GT ./. chr1 85741898 . T . . LowGQX END=85742058 GT ./. chr1 85787133 . G . . LowGQX END=85787254 GT ./. chr1 85790421 . A . . LowGQX END=85790569 GT ./. chr1 85816096 . A . . LowGQX END=85816220 GT ./. chr1 85817176 . A . . LowGQX END=85817276 GT ./. chr1 85824429 . A . . LowGQX END=85824533 GT ./. chr1 85870015 . C . . LowGQX END=85870115 GT ./. chr1 85930141 . T . . LowGQX END=85930241 GT ./. chr1 85930424 . A . . LowGQX END=85930731 GT ./. chr1 86046650 . C . . LowGQX END=86046750 GT ./. chr1 86047046 . A . . LowGQX END=86047264 GT ./. chr1 86047535 . A . . LowGQX END=86048072 GT ./. chr1 86048097 . A . . LowGQX END=86048310 GT ./. chr1 86048421 . A . . LowGQX END=86048728 GT ./. chr1 86119712 . T . . LowGQX END=86119812 GT ./. chr1 86123478 . T . . LowGQX END=86123657 GT ./. chr1 86142908 . A . . LowGQX END=86143008 GT ./. chr1 86144322 . C . . LowGQX END=86144475 GT ./. chr1 86146504 . A . . LowGQX END=86146604 GT ./. chr1 86167838 . A . . LowGQX END=86167946 GT ./. chr1 86171754 . A . . LowGQX END=86171854 GT ./. chr1 86171930 . A . . LowGQX END=86172041 GT ./. chr1 86172053 . G . . LowGQX END=86172208 GT ./. chr1 86173310 . A . . LowGQX END=86173970 GT ./. chr1 86196227 . C . . LowGQX END=86196378 GT ./. chr1 86200430 . A . . LowGQX END=86200650 GT ./. chr1 86201940 . T . . LowGQX END=86202243 GT ./. chr1 86203077 . A . . LowGQX END=86203191 GT ./. chr1 86210347 . A . . LowGQX END=86210520 GT ./. chr1 86211107 . A . . LowGQX END=86211207 GT ./. chr1 86227043 . G . . LowGQX END=86227143 GT ./. chr1 86227182 . T . . LowGQX END=86227282 GT ./. chr1 86241325 . G . . LowGQX END=86241425 GT ./. chr1 86246880 . G . . LowGQX END=86246980 GT ./. chr1 86249161 . G . . LowGQX END=86249261 GT ./. chr1 86249773 . T . . LowGQX END=86249873 GT ./. chr1 86249940 . A . . LowGQX END=86250052 GT ./. chr1 86252035 . A . . LowGQX END=86252147 GT ./. chr1 86282469 . A . . LowGQX END=86282581 GT ./. chr1 86283694 . G . . LowGQX END=86283794 GT ./. chr1 86289196 . T . . LowGQX END=86289296 GT ./. chr1 86289345 . G . . LowGQX END=86289445 GT ./. chr1 86304245 . T . . LowGQX END=86304345 GT ./. chr1 86306833 . T . . LowGQX END=86306984 GT ./. chr1 86307728 . A . . LowGQX END=86307828 GT ./. chr1 86308000 . T . . LowGQX END=86308151 GT ./. chr1 86313346 . A . . LowGQX END=86313458 GT ./. chr1 86315013 . C . . LowGQX END=86315113 GT ./. chr1 86334200 . A . . LowGQX END=86334312 GT ./. chr1 86334442 . A . . LowGQX END=86334542 GT ./. chr1 86340309 . A . . LowGQX END=86340409 GT ./. chr1 86340937 . T . . LowGQX END=86341037 GT ./. chr1 86342722 . T . . LowGQX END=86342882 GT ./. chr1 86355220 . G . . LowGQX END=86355371 GT ./. chr1 86361459 . C . . LowGQX END=86361614 GT ./. chr1 86361677 . T . . LowGQX END=86361777 GT ./. chr1 86362016 . A . . LowGQX END=86362116 GT ./. chr1 86372854 . A . . LowGQX END=86372954 GT ./. chr1 86374199 . C . . LowGQX END=86374358 GT ./. chr1 86375541 . G . . LowGQX END=86375710 GT ./. chr1 86377040 . C . . LowGQX END=86377191 GT ./. chr1 86426456 . T . . LowGQX END=86426615 GT ./. chr1 86426850 . T . . LowGQX END=86427005 GT ./. chr1 86430669 . G . . LowGQX END=86430769 GT ./. chr1 86435883 . A . . LowGQX END=86435983 GT ./. chr1 86436941 . A . . LowGQX END=86437100 GT ./. chr1 86453202 . T . . LowGQX END=86453361 GT ./. chr1 86482751 . G . . LowGQX END=86482962 GT ./. chr1 86487900 . G . . LowGQX END=86488000 GT ./. chr1 86488198 . A . . LowGQX END=86488298 GT ./. chr1 86488489 . T . . LowGQX END=86488589 GT ./. chr1 86488614 . C . . LowGQX END=86488714 GT ./. chr1 86497534 . A . . LowGQX END=86497634 GT ./. chr1 86499471 . A . . LowGQX END=86499630 GT ./. chr1 86511498 . A . . LowGQX END=86511598 GT ./. chr1 86512426 . A . . LowGQX END=86512581 GT ./. chr1 86515784 . C . . LowGQX END=86515884 GT ./. chr1 86523587 . A . . LowGQX END=86523687 GT ./. chr1 86524781 . A . . LowGQX END=86524881 GT ./. chr1 86529371 . T . . LowGQX END=86529471 GT ./. chr1 86554834 . A . . LowGQX END=86554985 GT ./. chr1 86557927 . T . . LowGQX END=86558078 GT ./. chr1 86578227 . T . . LowGQX END=86578327 GT ./. chr1 86580985 . G . . LowGQX END=86581085 GT ./. chr1 86590526 . A . . LowGQX END=86591900 GT ./. chr1 86611785 . A . . LowGQX END=86611885 GT ./. chr1 86622002 . A . . LowGQX END=86622102 GT ./. chr1 86795869 . C . . LowGQX END=86795969 GT ./. chr1 86814431 . A . . LowGQX END=86814621 GT ./. chr1 86817833 . T . . LowGQX END=86817933 GT ./. chr1 86818540 . A . . LowGQX END=86818710 GT ./. chr1 86820211 . A . . LowGQX END=86820378 GT ./. chr1 86820395 . A . . LowGQX END=86820550 GT ./. chr1 86821000 . T . . LowGQX END=86821100 GT ./. chr1 86821634 . G . . LowGQX END=86821734 GT ./. chr1 86822125 . A . . LowGQX END=86822288 GT ./. chr1 86824413 . A . . LowGQX END=86824628 GT ./. chr1 86826107 . A . . LowGQX END=86826222 GT ./. chr1 86834312 . A . . LowGQX END=86834412 GT ./. chr1 86836699 . A . . LowGQX END=86836839 GT ./. chr1 86838112 . A . . LowGQX END=86838272 GT ./. chr1 86841914 . A . . LowGQX END=86842104 GT ./. chr1 86847923 . A . . LowGQX END=86848093 GT ./. chr1 86848542 . G . . LowGQX END=86848700 GT ./. chr1 86848745 . T . . LowGQX END=86848899 GT ./. chr1 86850357 . A . . LowGQX END=86850537 GT ./. chr1 86851139 . A . . LowGQX END=86851319 GT ./. chr1 86852527 . T . . LowGQX END=86852727 GT ./. chr1 86889929 . A . . LowGQX END=86890119 GT ./. chr1 86890980 . T . . LowGQX END=86891162 GT ./. chr1 86894099 . A . . LowGQX END=86894254 GT ./. chr1 86896473 . C . . LowGQX END=86896656 GT ./. chr1 86898020 . A . . LowGQX END=86898214 GT ./. chr1 86900199 . A . . LowGQX END=86900431 GT ./. chr1 86904557 . A . . LowGQX END=86904792 GT ./. chr1 86905829 . A . . LowGQX END=86906011 GT ./. chr1 86907118 . A . . LowGQX END=86907229 GT ./. chr1 86909468 . A . . LowGQX END=86909697 GT ./. chr1 86913189 . A . . LowGQX END=86913464 GT ./. chr1 86916244 . A . . LowGQX END=86916419 GT ./. chr1 86919050 . A . . LowGQX END=86919288 GT ./. chr1 86920766 . A . . LowGQX END=86921213 GT ./. chr1 86934653 . C . . LowGQX END=86934819 GT ./. chr1 86939098 . A . . LowGQX END=86939243 GT ./. chr1 86939410 . A . . LowGQX END=86939562 GT ./. chr1 86942079 . G . . LowGQX END=86942239 GT ./. chr1 86947886 . A . . LowGQX END=86948068 GT ./. chr1 86951024 . A . . LowGQX END=86951247 GT ./. chr1 86952207 . A . . LowGQX END=86952439 GT ./. chr1 86954677 . A . . LowGQX END=86954856 GT ./. chr1 86956946 . A . . LowGQX END=86957057 GT ./. chr1 86959065 . A . . LowGQX END=86959285 GT ./. chr1 86959868 . A . . LowGQX END=86960134 GT ./. chr1 86961186 . A . . LowGQX END=86961361 GT ./. chr1 86964253 . A . . LowGQX END=86964497 GT ./. chr1 86965335 . A . . LowGQX END=86965731 GT ./. chr1 87012771 . A . . LowGQX END=87012964 GT ./. chr1 87025573 . T . . LowGQX END=87025758 GT ./. chr1 87025892 . A . . LowGQX END=87026044 GT ./. chr1 87029342 . A . . LowGQX END=87029455 GT ./. chr1 87030955 . A . . LowGQX END=87031137 GT ./. chr1 87031483 . A . . LowGQX END=87031706 GT ./. chr1 87033105 . A . . LowGQX END=87033337 GT ./. chr1 87036758 . A . . LowGQX END=87036940 GT ./. chr1 87038295 . A . . LowGQX END=87038512 GT ./. chr1 87040221 . A . . LowGQX END=87040441 GT ./. chr1 87041013 . A . . LowGQX END=87041285 GT ./. chr1 87043583 . A . . LowGQX END=87043758 GT ./. chr1 87045035 . A . . LowGQX END=87045273 GT ./. chr1 87045623 . A . . LowGQX END=87046031 GT ./. chr1 87099975 . A . . LowGQX END=87100138 GT ./. chr1 87101281 . A . . LowGQX END=87101426 GT ./. chr1 87101637 . A . . LowGQX END=87101827 GT ./. chr1 87102431 . T . . LowGQX END=87102594 GT ./. chr1 87104539 . A . . LowGQX END=87104721 GT ./. chr1 87108204 . T . . LowGQX END=87108304 GT ./. chr1 87170509 . G . . LowGQX END=87170669 GT ./. chr1 87181405 . A . . LowGQX END=87181585 GT ./. chr1 87185188 . A . . LowGQX END=87185321 GT ./. chr1 87188221 . A . . LowGQX END=87188359 GT ./. chr1 87189993 . T . . LowGQX END=87190144 GT ./. chr1 87194079 . A . . LowGQX END=87194179 GT ./. chr1 87195733 . A . . LowGQX END=87195833 GT ./. chr1 87200280 . T . . LowGQX END=87200380 GT ./. chr1 87200760 . A . . LowGQX END=87200865 GT ./. chr1 87207889 . A . . LowGQX END=87208122 GT ./. chr1 87208755 . T . . LowGQX END=87208921 GT ./. chr1 87329156 . T . . LowGQX END=87329289 GT ./. chr1 87333711 . G . . LowGQX END=87333811 GT ./. chr1 87346327 . G . . LowGQX END=87346427 GT ./. chr1 87352809 . C . . LowGQX END=87352909 GT ./. chr1 87368933 . C . . LowGQX END=87369132 GT ./. chr1 87379703 . A . . LowGQX END=87379803 GT ./. chr1 87380668 . G . . LowGQX END=87380846 GT ./. chr1 87458738 . G . . LowGQX END=87458838 GT ./. chr1 87530132 . C . . LowGQX END=87530232 GT ./. chr1 87538615 . A . . LowGQX END=87538858 GT ./. chr1 87549870 . T . . LowGQX END=87549970 GT ./. chr1 87558212 . A . . LowGQX END=87558392 GT ./. chr1 87563519 . A . . LowGQX END=87563623 GT ./. chr1 87569113 . A . . LowGQX END=87569275 GT ./. chr1 87570151 . A . . LowGQX END=87570382 GT ./. chr1 87597769 . A . . LowGQX END=87598600 GT ./. chr1 87599296 . G . . LowGQX END=87599402 GT ./. chr1 87599647 . G . . LowGQX END=87599747 GT ./. chr1 87633789 . T . . LowGQX END=87633889 GT ./. chr1 87797697 . C . . LowGQX END=87797937 GT ./. chr1 87805217 . A . . LowGQX END=87805318 GT ./. chr1 87805728 . A . . LowGQX END=87805918 GT ./. chr1 87810426 . C . . LowGQX END=87810526 GT ./. chr1 87814381 . A . . LowGQX END=87814481 GT ./. chr1 89150178 . T . . LowGQX END=89150392 GT ./. chr1 89206669 . A . . LowGQX END=89206974 GT ./. chr1 89225873 . A . . LowGQX END=89226062 GT ./. chr1 89236033 . A . . LowGQX END=89236155 GT ./. chr1 89237102 . A . . LowGQX END=89237252 GT ./. chr1 89237344 . A . . LowGQX END=89237565 GT ./. chr1 89246791 . C . . LowGQX END=89246891 GT ./. chr1 89250320 . A . . LowGQX END=89250510 GT ./. chr1 89251785 . A . . LowGQX END=89251899 GT ./. chr1 89270072 . A . . LowGQX END=89270220 GT ./. chr1 89270517 . T . . LowGQX END=89270617 GT ./. chr1 89271178 . A . . LowGQX END=89271494 GT ./. chr1 89271572 . A . . LowGQX END=89271703 GT ./. chr1 89272994 . A . . LowGQX END=89273129 GT ./. chr1 89273200 . T . . LowGQX END=89273300 GT ./. chr1 89273363 . T . . LowGQX END=89273463 GT ./. chr1 89279218 . T . . LowGQX END=89279448 GT ./. chr1 89281068 . A . . LowGQX END=89281168 GT ./. chr1 89287606 . A . . LowGQX END=89287706 GT ./. chr1 89289982 . A . . LowGQX END=89290082 GT ./. chr1 89294162 . A . . LowGQX END=89294309 GT ./. chr1 89294649 . C . . LowGQX END=89294749 GT ./. chr1 89298375 . G . . LowGQX END=89298537 GT ./. chr1 89298751 . T . . LowGQX END=89298851 GT ./. chr1 89298926 . A . . LowGQX END=89299134 GT ./. chr1 89318854 . G . . LowGQX END=89319032 GT ./. chr1 89322887 . A . . LowGQX END=89323173 GT ./. chr1 89325563 . A . . LowGQX END=89325697 GT ./. chr1 89325821 . A . . LowGQX END=89325972 GT ./. chr1 89329662 . A . . LowGQX END=89329800 GT ./. chr1 89352942 . A . . LowGQX END=89353102 GT ./. chr1 89357125 . G . . LowGQX END=89357225 GT ./. chr1 89401848 . T . . LowGQX END=89401948 GT ./. chr1 89408682 . A . . LowGQX END=89408782 GT ./. chr1 89408961 . C . . LowGQX END=89409120 GT ./. chr1 89414772 . A . . LowGQX END=89414963 GT ./. chr1 89418741 . C . . LowGQX END=89418841 GT ./. chr1 89420821 . A . . LowGQX END=89420921 GT ./. chr1 89426848 . A . . LowGQX END=89426973 GT ./. chr1 89427062 . A . . LowGQX END=89427192 GT ./. chr1 89427736 . A . . LowGQX END=89427836 GT ./. chr1 89430320 . G . . LowGQX END=89430420 GT ./. chr1 89430510 . A . . LowGQX END=89430700 GT ./. chr1 89434351 . A . . LowGQX END=89434531 GT ./. chr1 89435020 . A . . LowGQX END=89435172 GT ./. chr1 89448335 . T . . LowGQX END=89449512 GT ./. chr1 89453933 . A . . LowGQX END=89454036 GT ./. chr1 89473405 . G . . LowGQX END=89473538 GT ./. chr1 89474573 . T . . LowGQX END=89474826 GT ./. chr1 89475023 . T . . LowGQX END=89475180 GT ./. chr1 89476534 . T . . LowGQX END=89476864 GT ./. chr1 89477417 . A . . LowGQX END=89477717 GT ./. chr1 89478866 . A . . LowGQX END=89479113 GT ./. chr1 89479759 . C . . LowGQX END=89479965 GT ./. chr1 89480051 . T . . LowGQX END=89480151 GT ./. chr1 89480228 . A . . LowGQX END=89480342 GT ./. chr1 89480968 . A . . LowGQX END=89481100 GT ./. chr1 89485804 . C . . LowGQX END=89485904 GT ./. chr1 89486117 . T . . LowGQX END=89486407 GT ./. chr1 89519036 . C . . LowGQX END=89519154 GT ./. chr1 89520353 . G . . LowGQX END=89520561 GT ./. chr1 89520744 . T . . LowGQX END=89520901 GT ./. chr1 89521697 . A . . LowGQX END=89521914 GT ./. chr1 89522535 . A . . LowGQX END=89522820 GT ./. chr1 89523673 . A . . LowGQX END=89523920 GT ./. chr1 89524522 . A . . LowGQX END=89524729 GT ./. chr1 89524998 . A . . LowGQX END=89525112 GT ./. chr1 89525878 . A . . LowGQX END=89526010 GT ./. chr1 89528726 . A . . LowGQX END=89528920 GT ./. chr1 89573856 . T . . LowGQX END=89573977 GT ./. chr1 89575348 . G . . LowGQX END=89575556 GT ./. chr1 89575845 . A . . LowGQX END=89576005 GT ./. chr1 89578153 . A . . LowGQX END=89578370 GT ./. chr1 89579697 . A . . LowGQX END=89579982 GT ./. chr1 89582673 . A . . LowGQX END=89582920 GT ./. chr1 89583248 . A . . LowGQX END=89583459 GT ./. chr1 89585860 . A . . LowGQX END=89586030 GT ./. chr1 89586784 . A . . LowGQX END=89586956 GT ./. chr1 89587458 . A . . LowGQX END=89587652 GT ./. chr1 89597830 . C . . LowGQX END=89598089 GT ./. chr1 89598939 . A . . LowGQX END=89599137 GT ./. chr1 89607227 . A . . LowGQX END=89607334 GT ./. chr1 89613248 . A . . LowGQX END=89613465 GT ./. chr1 89614973 . A . . LowGQX END=89615258 GT ./. chr1 89616011 . A . . LowGQX END=89616261 GT ./. chr1 89617949 . A . . LowGQX END=89618150 GT ./. chr1 89618349 . A . . LowGQX END=89618463 GT ./. chr1 89630362 . A . . LowGQX END=89630544 GT ./. chr1 89637427 . A . . LowGQX END=89637621 GT ./. chr1 89650935 . T . . LowGQX END=89651155 GT ./. chr1 89652014 . A . . LowGQX END=89652212 GT ./. chr1 89652681 . A . . LowGQX END=89652788 GT ./. chr1 89654263 . A . . LowGQX END=89654480 GT ./. chr1 89655719 . A . . LowGQX END=89656004 GT ./. chr1 89656942 . A . . LowGQX END=89657192 GT ./. chr1 89658585 . A . . LowGQX END=89658786 GT ./. chr1 89658984 . A . . LowGQX END=89659098 GT ./. chr1 89660978 . A . . LowGQX END=89661110 GT ./. chr1 89662791 . A . . LowGQX END=89662990 GT ./. chr1 89664448 . T . . LowGQX END=89664548 GT ./. chr1 89726385 . C . . LowGQX END=89726503 GT ./. chr1 89727901 . A . . LowGQX END=89728087 GT ./. chr1 89728313 . T . . LowGQX END=89728471 GT ./. chr1 89729417 . A . . LowGQX END=89729634 GT ./. chr1 89730367 . A . . LowGQX END=89730652 GT ./. chr1 89732027 . A . . LowGQX END=89732274 GT ./. chr1 89732628 . A . . LowGQX END=89732839 GT ./. chr1 89733098 . A . . LowGQX END=89733212 GT ./. chr1 89734370 . A . . LowGQX END=89734542 GT ./. chr1 89735047 . A . . LowGQX END=89735241 GT ./. chr1 89834109 . C . . LowGQX END=89834303 GT ./. chr1 89835103 . A . . LowGQX END=89835235 GT ./. chr1 89843600 . A . . LowGQX END=89843774 GT ./. chr1 89843964 . C . . LowGQX END=89844175 GT ./. chr1 89845943 . A . . LowGQX END=89846193 GT ./. chr1 89847251 . A . . LowGQX END=89847536 GT ./. chr1 89848221 . A . . LowGQX END=89848438 GT ./. chr1 89849159 . C . . LowGQX END=89849316 GT ./. chr1 89849650 . A . . LowGQX END=89849848 GT ./. chr1 89850787 . A . . LowGQX END=89851031 GT ./. chr1 90048208 . T . . LowGQX END=90050351 GT ./. chr1 90058328 . A . . LowGQX END=90058605 GT ./. chr1 90152031 . A . . LowGQX END=90152173 GT ./. chr1 90171829 . T . . LowGQX END=90171929 GT ./. chr1 90178266 . A . . LowGQX END=90180544 GT ./. chr1 90309156 . G . . LowGQX END=90309256 GT ./. chr1 90398626 . G . . LowGQX END=90401207 GT ./. chr1 90457679 . A . . LowGQX END=90457779 GT ./. chr1 90460715 . C . . LowGQX END=90460875 GT ./. chr1 90463641 . T . . LowGQX END=90463741 GT ./. chr1 90470556 . T . . LowGQX END=90470656 GT ./. chr1 90470690 . A . . LowGQX END=90470810 GT ./. chr1 90472902 . A . . LowGQX END=90473312 GT ./. chr1 90475645 . A . . LowGQX END=90475848 GT ./. chr1 90478683 . A . . LowGQX END=90478799 GT ./. chr1 90482874 . A . . LowGQX END=90483054 GT ./. chr1 90484192 . T . . LowGQX END=90484346 GT ./. chr1 90486349 . A . . LowGQX END=90486484 GT ./. chr1 90487807 . A . . LowGQX END=90487907 GT ./. chr1 90492911 . A . . LowGQX END=90493268 GT ./. chr1 91177867 . T . . LowGQX END=91178184 GT ./. chr1 91180086 . A . . LowGQX END=91180316 GT ./. chr1 91182126 . A . . LowGQX END=91182756 GT ./. chr1 91382304 . A . . LowGQX END=91382599 GT ./. chr1 91383558 . T . . LowGQX END=91383763 GT ./. chr1 91402991 . A . . LowGQX END=91403699 GT ./. chr1 91403778 . A . . LowGQX END=91406918 GT ./. chr1 91447816 . G . . LowGQX END=91447962 GT ./. chr1 91726832 . A . . LowGQX END=91726932 GT ./. chr1 91727794 . T . . LowGQX END=91727984 GT ./. chr1 91728036 . A . . LowGQX END=91728152 GT ./. chr1 91731502 . A . . LowGQX END=91731721 GT ./. chr1 91733300 . A . . LowGQX END=91733460 GT ./. chr1 91739267 . A . . LowGQX END=91739375 GT ./. chr1 91740277 . A . . LowGQX END=91740377 GT ./. chr1 91742133 . A . . LowGQX END=91742303 GT ./. chr1 91742530 . G . . LowGQX END=91742630 GT ./. chr1 91778904 . A . . LowGQX END=91779055 GT ./. chr1 91779512 . A . . LowGQX END=91779620 GT ./. chr1 91781370 . A . . LowGQX END=91781532 GT ./. chr1 91781650 . A . . LowGQX END=91781750 GT ./. chr1 91781941 . T . . LowGQX END=91782041 GT ./. chr1 91784633 . A . . LowGQX END=91784769 GT ./. chr1 91784848 . A . . LowGQX END=91784950 GT ./. chr1 91788481 . C . . LowGQX END=91788635 GT ./. chr1 91788648 . A . . LowGQX END=91788808 GT ./. chr1 91790228 . T . . LowGQX END=91790380 GT ./. chr1 91804492 . C . . LowGQX END=91804592 GT ./. chr1 91808925 . A . . LowGQX END=91809078 GT ./. chr1 91812960 . A . . LowGQX END=91813060 GT ./. chr1 91816233 . G . . LowGQX END=91816431 GT ./. chr1 91817044 . A . . LowGQX END=91817204 GT ./. chr1 91818061 . A . . LowGQX END=91818211 GT ./. chr1 91818606 . A . . LowGQX END=91818712 GT ./. chr1 91818785 . G . . LowGQX END=91818885 GT ./. chr1 91840910 . T . . LowGQX END=91841010 GT ./. chr1 91841082 . A . . LowGQX END=91841287 GT ./. chr1 91843541 . G . . LowGQX END=91843743 GT ./. chr1 91843949 . G . . LowGQX END=91844049 GT ./. chr1 91844618 . A . . LowGQX END=91844818 GT ./. chr1 91845659 . A . . LowGQX END=91845796 GT ./. chr1 91846397 . C . . LowGQX END=91846555 GT ./. chr1 91850718 . G . . LowGQX END=91850872 GT ./. chr1 91851130 . A . . LowGQX END=91851394 GT ./. chr1 91859648 . A . . LowGQX END=91859962 GT ./. chr1 91861848 . A . . LowGQX END=91861965 GT ./. chr1 91866507 . C . . LowGQX END=91866727 GT ./. chr1 91870341 . G . . LowGQX END=91870441 GT ./. chr1 91967272 . T . . LowGQX END=91967391 GT ./. chr1 91973349 . T . . LowGQX END=91973503 GT ./. chr1 91973817 . A . . LowGQX END=91973997 GT ./. chr1 91977151 . T . . LowGQX END=91977251 GT ./. chr1 91977336 . A . . LowGQX END=91977483 GT ./. chr1 91978613 . A . . LowGQX END=91978867 GT ./. chr1 91979503 . A . . LowGQX END=91979603 GT ./. chr1 91980374 . A . . LowGQX END=91980557 GT ./. chr1 91981343 . A . . LowGQX END=91981443 GT ./. chr1 91985685 . A . . LowGQX END=91985839 GT ./. chr1 91989596 . A . . LowGQX END=91989995 GT ./. chr1 92100557 . A . . LowGQX END=92100657 GT ./. chr1 92107922 . G . . LowGQX END=92108201 GT ./. chr1 92108331 . G . . LowGQX END=92109336 GT ./. chr1 92145899 . A . . LowGQX END=92149466 GT ./. chr1 92161178 . G . . LowGQX END=92161388 GT ./. chr1 92163587 . A . . LowGQX END=92163739 GT ./. chr1 92174169 . T . . LowGQX END=92174392 GT ./. chr1 92177749 . C . . LowGQX END=92178151 GT ./. chr1 92181742 . A . . LowGQX END=92182003 GT ./. chr1 92182074 . A . . LowGQX END=92182317 GT ./. chr1 92184818 . A . . LowGQX END=92185073 GT ./. chr1 92185399 . A . . LowGQX END=92185839 GT ./. chr1 92187461 . A . . LowGQX END=92187753 GT ./. chr1 92193165 . A . . LowGQX END=92193415 GT ./. chr1 92195311 . A . . LowGQX END=92195582 GT ./. chr1 92200282 . A . . LowGQX END=92200568 GT ./. chr1 92224119 . C . . LowGQX END=92224359 GT ./. chr1 92251725 . A . . LowGQX END=92251825 GT ./. chr1 92262793 . C . . LowGQX END=92263080 GT ./. chr1 92266474 . C . . LowGQX END=92266674 GT ./. chr1 92326977 . A . . LowGQX END=92327202 GT ./. chr1 92351434 . C . . LowGQX END=92351837 GT ./. chr1 92428310 . G . . LowGQX END=92428506 GT ./. chr1 92430182 . A . . LowGQX END=92430324 GT ./. chr1 92433701 . A . . LowGQX END=92433830 GT ./. chr1 92441821 . A . . LowGQX END=92441998 GT ./. chr1 92442598 . A . . LowGQX END=92442953 GT ./. chr1 92443723 . A . . LowGQX END=92443856 GT ./. chr1 92445114 . T . . LowGQX END=92445317 GT ./. chr1 92446198 . A . . LowGQX END=92446375 GT ./. chr1 92446444 . A . . LowGQX END=92446738 GT ./. chr1 92446823 . A . . LowGQX END=92446941 GT ./. chr1 92447173 . A . . LowGQX END=92447315 GT ./. chr1 92456669 . A . . LowGQX END=92456822 GT ./. chr1 92457797 . T . . LowGQX END=92457949 GT ./. chr1 92459638 . A . . LowGQX END=92459814 GT ./. chr1 92467604 . A . . LowGQX END=92467709 GT ./. chr1 92469969 . A . . LowGQX END=92470179 GT ./. chr1 92470674 . A . . LowGQX END=92470859 GT ./. chr1 92479691 . A . . LowGQX END=92479848 GT ./. chr1 92495635 . C . . LowGQX END=92495870 GT ./. chr1 92498055 . C . . LowGQX END=92498155 GT ./. chr1 92508378 . A . . LowGQX END=92508540 GT ./. chr1 92511056 . T . . LowGQX END=92511267 GT ./. chr1 92515822 . G . . LowGQX END=92515980 GT ./. chr1 92518035 . A . . LowGQX END=92518218 GT ./. chr1 92528610 . A . . LowGQX END=92528846 GT ./. chr1 92546106 . A . . LowGQX END=92546317 GT ./. chr1 92554253 . A . . LowGQX END=92554455 GT ./. chr1 92568028 . A . . LowGQX END=92568229 GT ./. chr1 92573439 . A . . LowGQX END=92573609 GT ./. chr1 92595239 . T . . LowGQX END=92595339 GT ./. chr1 92604875 . A . . LowGQX END=92605073 GT ./. chr1 92606670 . A . . LowGQX END=92606830 GT ./. chr1 92612732 . T . . LowGQX END=92612832 GT ./. chr1 92613239 . A . . LowGQX END=92613361 GT ./. chr1 92632541 . G . . LowGQX END=92632698 GT ./. chr1 92633404 . G . . LowGQX END=92633543 GT ./. chr1 92634422 . G . . LowGQX END=92634553 GT ./. chr1 92636877 . A . . LowGQX END=92637037 GT ./. chr1 92642385 . G . . LowGQX END=92643104 GT ./. chr1 92643307 . T . . LowGQX END=92643462 GT ./. chr1 92643868 . G . . LowGQX END=92644009 GT ./. chr1 92645821 . G . . LowGQX END=92648153 GT ./. chr1 92649420 . G . . LowGQX END=92649888 GT ./. chr1 92696961 . G . . LowGQX END=92697061 GT ./. chr1 92706442 . A . . LowGQX END=92706542 GT ./. chr1 92707766 . A . . LowGQX END=92707866 GT ./. chr1 92709762 . C . . LowGQX END=92709945 GT ./. chr1 92710326 . T . . LowGQX END=92710426 GT ./. chr1 92711055 . T . . LowGQX END=92711234 GT ./. chr1 92712036 . C . . LowGQX END=92712255 GT ./. chr1 92712578 . T . . LowGQX END=92712753 GT ./. chr1 92713384 . A . . LowGQX END=92713598 GT ./. chr1 92728369 . C . . LowGQX END=92728535 GT ./. chr1 92729129 . T . . LowGQX END=92729341 GT ./. chr1 92730060 . A . . LowGQX END=92730247 GT ./. chr1 92731923 . A . . LowGQX END=92732101 GT ./. chr1 92732206 . A . . LowGQX END=92732350 GT ./. chr1 92733419 . T . . LowGQX END=92733744 GT ./. chr1 92735229 . A . . LowGQX END=92735385 GT ./. chr1 92736971 . T . . LowGQX END=92737261 GT ./. chr1 92751996 . T . . LowGQX END=92752201 GT ./. chr1 92754420 . A . . LowGQX END=92754760 GT ./. chr1 92755704 . A . . LowGQX END=92755915 GT ./. chr1 92756924 . T . . LowGQX END=92757146 GT ./. chr1 92762910 . G . . LowGQX END=92763138 GT ./. chr1 92763467 . G . . LowGQX END=92763608 GT ./. chr1 92764558 . G . . LowGQX END=92764718 GT ./. chr1 92765724 . T . . LowGQX END=92765824 GT ./. chr1 92766981 . A . . LowGQX END=92767150 GT ./. chr1 92769532 . A . . LowGQX END=92769635 GT ./. chr1 92769769 . A . . LowGQX END=92769924 GT ./. chr1 92772740 . T . . LowGQX END=92772840 GT ./. chr1 92786124 . G . . LowGQX END=92786224 GT ./. chr1 92789000 . A . . LowGQX END=92789935 GT ./. chr1 92798940 . T . . LowGQX END=92799040 GT ./. chr1 92801842 . T . . LowGQX END=92801995 GT ./. chr1 92811388 . T . . LowGQX END=92811488 GT ./. chr1 92829248 . C . . LowGQX END=92829348 GT ./. chr1 92846279 . A . . LowGQX END=92846433 GT ./. chr1 92852519 . T . . LowGQX END=92852619 GT ./. chr1 92941535 . G . . LowGQX END=92941816 GT ./. chr1 92944094 . T . . LowGQX END=92944362 GT ./. chr1 92945854 . T . . LowGQX END=92946094 GT ./. chr1 92946107 . G . . LowGQX END=92946697 GT ./. chr1 92948370 . A . . LowGQX END=92948655 GT ./. chr1 92948879 . G . . LowGQX END=92949096 GT ./. chr1 92979211 . G . . LowGQX END=92979530 GT ./. chr1 93029197 . A . . LowGQX END=93029297 GT ./. chr1 93070862 . A . . LowGQX END=93070962 GT ./. chr1 93073136 . A . . LowGQX END=93073316 GT ./. chr1 93087824 . T . . LowGQX END=93087924 GT ./. chr1 93089731 . A . . LowGQX END=93089921 GT ./. chr1 93091349 . A . . LowGQX END=93091494 GT ./. chr1 93101757 . A . . LowGQX END=93101896 GT ./. chr1 93128275 . C . . LowGQX END=93128423 GT ./. chr1 93128943 . G . . LowGQX END=93129043 GT ./. chr1 93131473 . T . . LowGQX END=93131573 GT ./. chr1 93142643 . A . . LowGQX END=93142796 GT ./. chr1 93159357 . A . . LowGQX END=93159459 GT ./. chr1 93159851 . C . . LowGQX END=93159951 GT ./. chr1 93160865 . A . . LowGQX END=93161013 GT ./. chr1 93163415 . A . . LowGQX END=93163545 GT ./. chr1 93167625 . A . . LowGQX END=93167846 GT ./. chr1 93168920 . T . . LowGQX END=93169210 GT ./. chr1 93170110 . A . . LowGQX END=93170304 GT ./. chr1 93201953 . A . . LowGQX END=93202187 GT ./. chr1 93257877 . T . . LowGQX END=93257977 GT ./. chr1 93297621 . T . . LowGQX END=93297743 GT ./. chr1 93298534 . C . . LowGQX END=93298634 GT ./. chr1 93298891 . A . . LowGQX END=93299269 GT ./. chr1 93300285 . G . . LowGQX END=93300522 GT ./. chr1 93301696 . T . . LowGQX END=93302002 GT ./. chr1 93302844 . C . . LowGQX END=93302944 GT ./. chr1 93302962 . G . . LowGQX END=93303242 GT ./. chr1 93306057 . A . . LowGQX END=93306409 GT ./. chr1 93307272 . T . . LowGQX END=93307474 GT ./. chr1 93308939 . A . . LowGQX END=93309753 GT ./. chr1 93311009 . T . . LowGQX END=93311109 GT ./. chr1 93312089 . C . . LowGQX END=93312189 GT ./. chr1 93312739 . C . . LowGQX END=93312917 GT ./. chr1 93316404 . C . . LowGQX END=93316513 GT ./. chr1 93341852 . C . . LowGQX END=93342021 GT ./. chr1 93426910 . T . . LowGQX END=93427062 GT ./. chr1 93545037 . G . . LowGQX END=93545137 GT ./. chr1 93575785 . A . . LowGQX END=93575988 GT ./. chr1 93576093 . G . . LowGQX END=93576193 GT ./. chr1 93580243 . A . . LowGQX END=93580343 GT ./. chr1 93580543 . A . . LowGQX END=93580648 GT ./. chr1 93581025 . A . . LowGQX END=93581178 GT ./. chr1 93583900 . A . . LowGQX END=93584000 GT ./. chr1 93584818 . A . . LowGQX END=93584975 GT ./. chr1 93586104 . A . . LowGQX END=93586274 GT ./. chr1 93592773 . T . . LowGQX END=93592873 GT ./. chr1 93594833 . A . . LowGQX END=93595008 GT ./. chr1 93599258 . A . . LowGQX END=93599368 GT ./. chr1 93599462 . A . . LowGQX END=93599562 GT ./. chr1 93599646 . A . . LowGQX END=93599755 GT ./. chr1 93602225 . A . . LowGQX END=93602587 GT ./. chr1 93620225 . T . . LowGQX END=93620448 GT ./. chr1 93621567 . A . . LowGQX END=93621667 GT ./. chr1 93621838 . A . . LowGQX END=93622043 GT ./. chr1 93625684 . A . . LowGQX END=93625786 GT ./. chr1 93645598 . C . . LowGQX END=93645819 GT ./. chr1 93646016 . C . . LowGQX END=93646506 GT ./. chr1 93648915 . A . . LowGQX END=93649055 GT ./. chr1 93649533 . A . . LowGQX END=93649706 GT ./. chr1 93651870 . G . . LowGQX END=93652063 GT ./. chr1 93657555 . A . . LowGQX END=93657666 GT ./. chr1 93659121 . A . . LowGQX END=93659351 GT ./. chr1 93667447 . A . . LowGQX END=93667548 GT ./. chr1 93671065 . A . . LowGQX END=93671245 GT ./. chr1 93672662 . A . . LowGQX END=93672958 GT ./. chr1 93676357 . A . . LowGQX END=93676486 GT ./. chr1 93677626 . A . . LowGQX END=93677821 GT ./. chr1 93680298 . A . . LowGQX END=93680526 GT ./. chr1 93682191 . A . . LowGQX END=93682351 GT ./. chr1 93683293 . A . . LowGQX END=93683429 GT ./. chr1 93687164 . A . . LowGQX END=93687344 GT ./. chr1 93687405 . A . . LowGQX END=93687505 GT ./. chr1 93691888 . A . . LowGQX END=93692058 GT ./. chr1 93697981 . A . . LowGQX END=93698153 GT ./. chr1 93701753 . A . . LowGQX END=93701982 GT ./. chr1 93704865 . A . . LowGQX END=93705033 GT ./. chr1 93705238 . A . . LowGQX END=93705456 GT ./. chr1 93711660 . A . . LowGQX END=93711764 GT ./. chr1 93712343 . C . . LowGQX END=93712563 GT ./. chr1 93720026 . A . . LowGQX END=93720226 GT ./. chr1 93721890 . A . . LowGQX END=93722098 GT ./. chr1 93724303 . A . . LowGQX END=93724445 GT ./. chr1 93730256 . A . . LowGQX END=93730501 GT ./. chr1 93735903 . G . . LowGQX END=93736372 GT ./. chr1 93743978 . G . . LowGQX END=93744078 GT ./. chr1 93812201 . C . . LowGQX END=93812425 GT ./. chr1 93819463 . A . . LowGQX END=93819631 GT ./. chr1 93826048 . A . . LowGQX END=93826228 GT ./. chr1 93913741 . G . . LowGQX END=93913901 GT ./. chr1 93964974 . G . . LowGQX END=93965141 GT ./. chr1 93987556 . G . . LowGQX END=93987716 GT ./. chr1 93988900 . G . . LowGQX END=93989049 GT ./. chr1 93989799 . C . . LowGQX END=93989899 GT ./. chr1 93995208 . G . . LowGQX END=93995368 GT ./. chr1 93996261 . G . . LowGQX END=93996441 GT ./. chr1 93998478 . G . . LowGQX END=93998626 GT ./. chr1 94000261 . G . . LowGQX END=94000466 GT ./. chr1 94001888 . G . . LowGQX END=94002048 GT ./. chr1 94006556 . G . . LowGQX END=94006656 GT ./. chr1 94009663 . G . . LowGQX END=94009774 GT ./. chr1 94012348 . T . . LowGQX END=94012568 GT ./. chr1 94012901 . A . . LowGQX END=94013001 GT ./. chr1 94014834 . G . . LowGQX END=94014984 GT ./. chr1 94016503 . G . . LowGQX END=94016683 GT ./. chr1 94017920 . A . . LowGQX END=94018020 GT ./. chr1 94027796 . T . . LowGQX END=94027979 GT ./. chr1 94032834 . A . . LowGQX END=94033051 GT ./. chr1 94033295 . A . . LowGQX END=94033411 GT ./. chr1 94037098 . C . . LowGQX END=94037401 GT ./. chr1 94041569 . A . . LowGQX END=94041689 GT ./. chr1 94047856 . A . . LowGQX END=94048513 GT ./. chr1 94049573 . A . . LowGQX END=94049681 GT ./. chr1 94054532 . A . . LowGQX END=94054979 GT ./. chr1 94057780 . G . . LowGQX END=94057953 GT ./. chr1 94079396 . A . . LowGQX END=94079496 GT ./. chr1 94107830 . A . . LowGQX END=94107930 GT ./. chr1 94140158 . T . . LowGQX END=94140489 GT ./. chr1 94312327 . C . . LowGQX END=94312538 GT ./. chr1 94335404 . A . . LowGQX END=94335504 GT ./. chr1 94336238 . C . . LowGQX END=94336349 GT ./. chr1 94337627 . C . . LowGQX END=94337793 GT ./. chr1 94338673 . A . . LowGQX END=94338824 GT ./. chr1 94341200 . C . . LowGQX END=94341380 GT ./. chr1 94341823 . C . . LowGQX END=94343440 GT ./. chr1 94344619 . A . . LowGQX END=94344719 GT ./. chr1 94354544 . A . . LowGQX END=94354718 GT ./. chr1 94360168 . A . . LowGQX END=94360287 GT ./. chr1 94362172 . A . . LowGQX END=94362379 GT ./. chr1 94363323 . A . . LowGQX END=94363475 GT ./. chr1 94367079 . T . . LowGQX END=94367234 GT ./. chr1 94370007 . G . . LowGQX END=94370162 GT ./. chr1 94374542 . C . . LowGQX END=94374722 GT ./. chr1 94458742 . T . . LowGQX END=94458866 GT ./. chr1 94461614 . C . . LowGQX END=94461803 GT ./. chr1 94463366 . G . . LowGQX END=94463718 GT ./. chr1 94466341 . C . . LowGQX END=94466713 GT ./. chr1 94467114 . A . . LowGQX END=94467600 GT ./. chr1 94470946 . A . . LowGQX END=94471190 GT ./. chr1 94473139 . C . . LowGQX END=94473348 GT ./. chr1 94473740 . A . . LowGQX END=94473905 GT ./. chr1 94474256 . T . . LowGQX END=94474479 GT ./. chr1 94476180 . T . . LowGQX END=94476280 GT ./. chr1 94476305 . G . . LowGQX END=94476537 GT ./. chr1 94476767 . C . . LowGQX END=94476993 GT ./. chr1 94480048 . T . . LowGQX END=94480298 GT ./. chr1 94481244 . C . . LowGQX END=94481462 GT ./. chr1 94484083 . A . . LowGQX END=94484183 GT ./. chr1 94485087 . C . . LowGQX END=94485367 GT ./. chr1 94486745 . G . . LowGQX END=94487017 GT ./. chr1 94487145 . C . . LowGQX END=94487322 GT ./. chr1 94487351 . G . . LowGQX END=94487559 GT ./. chr1 94488891 . T . . LowGQX END=94489028 GT ./. chr1 94490459 . A . . LowGQX END=94490656 GT ./. chr1 94494950 . G . . LowGQX END=94495239 GT ./. chr1 94495933 . G . . LowGQX END=94496134 GT ./. chr1 94496501 . C . . LowGQX END=94496728 GT ./. chr1 94497283 . G . . LowGQX END=94497651 GT ./. chr1 94502245 . A . . LowGQX END=94502396 GT ./. chr1 94502650 . G . . LowGQX END=94502958 GT ./. chr1 94505548 . C . . LowGQX END=94505735 GT ./. chr1 94506714 . T . . LowGQX END=94507010 GT ./. chr1 94508266 . G . . LowGQX END=94508506 GT ./. chr1 94508841 . G . . LowGQX END=94509083 GT ./. chr1 94510118 . G . . LowGQX END=94510352 GT ./. chr1 94511277 . A . . LowGQX END=94511522 GT ./. chr1 94512424 . C . . LowGQX END=94512701 GT ./. chr1 94514373 . G . . LowGQX END=94514565 GT ./. chr1 94517138 . A . . LowGQX END=94517306 GT ./. chr1 94520616 . T . . LowGQX END=94520923 GT ./. chr1 94522106 . A . . LowGQX END=94522430 GT ./. chr1 94526042 . G . . LowGQX END=94526367 GT ./. chr1 94528082 . C . . LowGQX END=94528361 GT ./. chr1 94528617 . A . . LowGQX END=94528925 GT ./. chr1 94543195 . A . . LowGQX END=94543495 GT ./. chr1 94544095 . C . . LowGQX END=94544314 GT ./. chr1 94544827 . A . . LowGQX END=94545069 GT ./. chr1 94545983 . A . . LowGQX END=94546326 GT ./. chr1 94548857 . A . . LowGQX END=94549049 GT ./. chr1 94564299 . C . . LowGQX END=94564599 GT ./. chr1 94568520 . C . . LowGQX END=94568750 GT ./. chr1 94574082 . C . . LowGQX END=94574324 GT ./. chr1 94576943 . T . . LowGQX END=94577187 GT ./. chr1 94578478 . C . . LowGQX END=94578674 GT ./. chr1 94586479 . T . . LowGQX END=94586653 GT ./. chr1 94620128 . T . . LowGQX END=94620228 GT ./. chr1 94639423 . C . . LowGQX END=94640308 GT ./. chr1 94643160 . C . . LowGQX END=94643279 GT ./. chr1 94643406 . A . . LowGQX END=94643726 GT ./. chr1 94645279 . A . . LowGQX END=94645516 GT ./. chr1 94649665 . G . . LowGQX END=94649847 GT ./. chr1 94650426 . A . . LowGQX END=94650619 GT ./. chr1 94650896 . A . . LowGQX END=94651040 GT ./. chr1 94652053 . A . . LowGQX END=94652156 GT ./. chr1 94654391 . A . . LowGQX END=94654500 GT ./. chr1 94654770 . A . . LowGQX END=94654911 GT ./. chr1 94655450 . T . . LowGQX END=94655642 GT ./. chr1 94667234 . G . . LowGQX END=94667416 GT ./. chr1 94668060 . G . . LowGQX END=94668291 GT ./. chr1 94668465 . A . . LowGQX END=94668565 GT ./. chr1 94668654 . A . . LowGQX END=94668769 GT ./. chr1 94669469 . G . . LowGQX END=94669569 GT ./. chr1 94670615 . A . . LowGQX END=94670757 GT ./. chr1 94671166 . A . . LowGQX END=94671266 GT ./. chr1 94674375 . A . . LowGQX END=94674475 GT ./. chr1 94674758 . T . . LowGQX END=94674909 GT ./. chr1 94685772 . C . . LowGQX END=94685951 GT ./. chr1 94696961 . A . . LowGQX END=94697170 GT ./. chr1 94883984 . G . . LowGQX END=94884196 GT ./. chr1 94921275 . T . . LowGQX END=94921375 GT ./. chr1 94924111 . A . . LowGQX END=94924251 GT ./. chr1 94930280 . A . . LowGQX END=94930481 GT ./. chr1 94933424 . T . . LowGQX END=94933615 GT ./. chr1 94939271 . G . . LowGQX END=94939443 GT ./. chr1 94940648 . A . . LowGQX END=94940848 GT ./. chr1 94941119 . T . . LowGQX END=94941345 GT ./. chr1 94943764 . C . . LowGQX END=94943923 GT ./. chr1 94944043 . A . . LowGQX END=94944143 GT ./. chr1 94945969 . T . . LowGQX END=94946214 GT ./. chr1 94948675 . T . . LowGQX END=94948847 GT ./. chr1 94953047 . C . . LowGQX END=94953591 GT ./. chr1 94955230 . T . . LowGQX END=94955583 GT ./. chr1 94956689 . A . . LowGQX END=94956855 GT ./. chr1 94964107 . A . . LowGQX END=94964642 GT ./. chr1 94965000 . A . . LowGQX END=94965222 GT ./. chr1 94972043 . T . . LowGQX END=94972250 GT ./. chr1 94980651 . T . . LowGQX END=94980800 GT ./. chr1 94982557 . T . . LowGQX END=94982737 GT ./. chr1 94996014 . C . . LowGQX END=94996155 GT ./. chr1 94997875 . A . . LowGQX END=94998039 GT ./. chr1 94998624 . A . . LowGQX END=94998844 GT ./. chr1 95001519 . A . . LowGQX END=95001723 GT ./. chr1 95005761 . G . . LowGQX END=95005927 GT ./. chr1 95007040 . C . . LowGQX END=95007195 GT ./. chr1 95285911 . C . . LowGQX END=95286071 GT ./. chr1 95286504 . G . . LowGQX END=95286613 GT ./. chr1 95290048 . G . . LowGQX END=95290194 GT ./. chr1 95291389 . A . . LowGQX END=95291495 GT ./. chr1 95293061 . A . . LowGQX END=95293202 GT ./. chr1 95294046 . C . . LowGQX END=95294146 GT ./. chr1 95303265 . A . . LowGQX END=95303430 GT ./. chr1 95305499 . T . . LowGQX END=95305599 GT ./. chr1 95307554 . A . . LowGQX END=95307683 GT ./. chr1 95310832 . A . . LowGQX END=95311023 GT ./. chr1 95322889 . A . . LowGQX END=95323059 GT ./. chr1 95330297 . A . . LowGQX END=95330458 GT ./. chr1 95332881 . A . . LowGQX END=95332981 GT ./. chr1 95356684 . A . . LowGQX END=95356826 GT ./. chr1 95357835 . A . . LowGQX END=95358076 GT ./. chr1 95360367 . T . . LowGQX END=95360481 GT ./. chr1 95363296 . A . . LowGQX END=95363642 GT ./. chr1 95364925 . A . . LowGQX END=95365076 GT ./. chr1 95367223 . A . . LowGQX END=95367344 GT ./. chr1 95367675 . A . . LowGQX END=95367817 GT ./. chr1 95368662 . T . . LowGQX END=95368762 GT ./. chr1 95368957 . A . . LowGQX END=95369124 GT ./. chr1 95392313 . A . . LowGQX END=95392473 GT ./. chr1 95426899 . A . . LowGQX END=95426999 GT ./. chr1 95428481 . A . . LowGQX END=95428785 GT ./. chr1 95448630 . T . . LowGQX END=95448865 GT ./. chr1 95492683 . A . . LowGQX END=95492819 GT ./. chr1 95530420 . A . . LowGQX END=95530576 GT ./. chr1 95538317 . A . . LowGQX END=95538457 GT ./. chr1 95609456 . A . . LowGQX END=95609615 GT ./. chr1 95614253 . T . . LowGQX END=95614353 GT ./. chr1 95615692 . C . . LowGQX END=95615844 GT ./. chr1 95616819 . C . . LowGQX END=95616979 GT ./. chr1 95639359 . G . . LowGQX END=95639459 GT ./. chr1 95657104 . A . . LowGQX END=95657427 GT ./. chr1 95696454 . C . . LowGQX END=95696533;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 95696534 . A . . LowGQX END=95696554 GT ./. chr1 95699780 . C . . LowGQX END=95699880 GT ./. chr1 95705396 . T . . LowGQX END=95705496 GT ./. chr1 95709765 . A . . LowGQX END=95710270 GT ./. chr1 95712096 . A . . LowGQX END=95712216 GT ./. chr1 95712310 . A . . LowGQX END=95712429 GT ./. chr1 97187375 . G . . LowGQX END=97187475 GT ./. chr1 97189086 . C . . LowGQX END=97189186 GT ./. chr1 97215157 . A . . LowGQX END=97215257 GT ./. chr1 97216791 . A . . LowGQX END=97216891 GT ./. chr1 97216969 . T . . LowGQX END=97217069 GT ./. chr1 97235257 . A . . LowGQX END=97235434 GT ./. chr1 97236242 . A . . LowGQX END=97236444 GT ./. chr1 97243139 . A . . LowGQX END=97243308 GT ./. chr1 97243390 . A . . LowGQX END=97243505 GT ./. chr1 97250603 . T . . LowGQX END=97250813 GT ./. chr1 97270340 . G . . LowGQX END=97270498 GT ./. chr1 97271942 . T . . LowGQX END=97272042 GT ./. chr1 97272360 . T . . LowGQX END=97272519 GT ./. chr1 97278266 . A . . LowGQX END=97278487 GT ./. chr1 97278574 . A . . LowGQX END=97278674 GT ./. chr1 97278828 . G . . LowGQX END=97278964 GT ./. chr1 97544481 . C . . LowGQX END=97544754 GT ./. chr1 97547835 . A . . LowGQX END=97548078 GT ./. chr1 97563994 . T . . LowGQX END=97564240 GT ./. chr1 97658574 . A . . LowGQX END=97658856 GT ./. chr1 97700357 . G . . LowGQX END=97700602 GT ./. chr1 97770764 . T . . LowGQX END=97770986 GT ./. chr1 97771682 . T . . LowGQX END=97771905 GT ./. chr1 97839066 . G . . LowGQX END=97839252 GT ./. chr1 97847898 . T . . LowGQX END=97848069 GT ./. chr1 97915564 . A . . LowGQX END=97915831 GT ./. chr1 97981231 . A . . LowGQX END=97981549 GT ./. chr1 98015065 . A . . LowGQX END=98015352 GT ./. chr1 98039265 . C . . LowGQX END=98039578 GT ./. chr1 98058723 . C . . LowGQX END=98058995 GT ./. chr1 98060564 . A . . LowGQX END=98060774 GT ./. chr1 98144600 . G . . LowGQX END=98144790 GT ./. chr1 98157222 . C . . LowGQX END=98157406 GT ./. chr1 98164856 . T . . LowGQX END=98165155 GT ./. chr1 98165759 . G . . LowGQX END=98165859 GT ./. chr1 98186393 . T . . LowGQX END=98186553 GT ./. chr1 98187015 . T . . LowGQX END=98187279 GT ./. chr1 98205897 . A . . LowGQX END=98206087 GT ./. chr1 98293619 . G . . LowGQX END=98293804 GT ./. chr1 98348769 . G . . LowGQX END=98348982 GT ./. chr1 98349365 . G . . LowGQX END=98349465 GT ./. chr1 98386389 . A . . LowGQX END=98386530 GT ./. chr1 98511626 . T . . LowGQX END=98511728 GT ./. chr1 99127276 . C . . LowGQX END=99127468 GT ./. chr1 99128262 . A . . LowGQX END=99128370 GT ./. chr1 99150440 . G . . LowGQX END=99150626 GT ./. chr1 99156629 . A . . LowGQX END=99156744 GT ./. chr1 99157089 . A . . LowGQX END=99157258 GT ./. chr1 99161072 . A . . LowGQX END=99161275 GT ./. chr1 99164260 . A . . LowGQX END=99164464 GT ./. chr1 99167367 . G . . LowGQX END=99167467 GT ./. chr1 99203791 . A . . LowGQX END=99203948 GT ./. chr1 99225599 . C . . LowGQX END=99225699 GT ./. chr1 99358536 . A . . LowGQX END=99358695 GT ./. chr1 99380340 . A . . LowGQX END=99380479 GT ./. chr1 99387436 . A . . LowGQX END=99387636 GT ./. chr1 99418624 . A . . LowGQX END=99418879 GT ./. chr1 99422123 . C . . LowGQX END=99422300 GT ./. chr1 99469989 . A . . LowGQX END=99470230 GT ./. chr1 99729973 . C . . LowGQX END=99730294 GT ./. chr1 99753519 . A . . LowGQX END=99753709 GT ./. chr1 99762292 . A . . LowGQX END=99762426 GT ./. chr1 99764456 . A . . LowGQX END=99764796 GT ./. chr1 99766444 . T . . LowGQX END=99766544 GT ./. chr1 99767278 . A . . LowGQX END=99767456 GT ./. chr1 99771239 . A . . LowGQX END=99772569 GT ./. chr1 100111847 . C . . LowGQX END=100111947 GT ./. chr1 100127806 . C . . LowGQX END=100128023 GT ./. chr1 100133196 . A . . LowGQX END=100133325 GT ./. chr1 100152230 . A . . LowGQX END=100152349 GT ./. chr1 100152453 . G . . LowGQX END=100152553 GT ./. chr1 100152630 . A . . LowGQX END=100152748 GT ./. chr1 100154329 . A . . LowGQX END=100155431 GT ./. chr1 100159493 . T . . LowGQX END=100159647 GT ./. chr1 100174452 . C . . LowGQX END=100174679 GT ./. chr1 100174735 . G . . LowGQX END=100174835 GT ./. chr1 100176361 . C . . LowGQX END=100176508 GT ./. chr1 100177641 . G . . LowGQX END=100177741 GT ./. chr1 100177972 . A . . LowGQX END=100178074 GT ./. chr1 100181136 . A . . LowGQX END=100181236 GT ./. chr1 100182964 . A . . LowGQX END=100183084 GT ./. chr1 100185038 . A . . LowGQX END=100185206 GT ./. chr1 100194047 . A . . LowGQX END=100194199 GT ./. chr1 100195204 . A . . LowGQX END=100195307 GT ./. chr1 100203640 . A . . LowGQX END=100203827 GT ./. chr1 100206347 . A . . LowGQX END=100206499 GT ./. chr1 100207733 . A . . LowGQX END=100207833 GT ./. chr1 100212848 . A . . LowGQX END=100212989 GT ./. chr1 100214117 . C . . LowGQX END=100214327 GT ./. chr1 100316540 . A . . LowGQX END=100316732 GT ./. chr1 100318175 . T . . LowGQX END=100318311 GT ./. chr1 100326977 . A . . LowGQX END=100327321 GT ./. chr1 100327762 . A . . LowGQX END=100328021 GT ./. chr1 100329891 . T . . LowGQX END=100330197 GT ./. chr1 100335905 . C . . LowGQX END=100336189 GT ./. chr1 100336263 . T . . LowGQX END=100336477 GT ./. chr1 100340192 . A . . LowGQX END=100340418 GT ./. chr1 100340659 . G . . LowGQX END=100341063 GT ./. chr1 100341963 . T . . LowGQX END=100342205 GT ./. chr1 100343146 . T . . LowGQX END=100343436 GT ./. chr1 100345428 . T . . LowGQX END=100345654 GT ./. chr1 100346137 . T . . LowGQX END=100346403 GT ./. chr1 100346581 . C . . LowGQX END=100346785 GT ./. chr1 100346797 . A . . LowGQX END=100347299 GT ./. chr1 100349625 . T . . LowGQX END=100350059 GT ./. chr1 100350074 . T . . LowGQX END=100350311 GT ./. chr1 100353483 . G . . LowGQX END=100353716 GT ./. chr1 100356725 . A . . LowGQX END=100356964 GT ./. chr1 100357111 . A . . LowGQX END=100357347 GT ./. chr1 100357937 . T . . LowGQX END=100358215 GT ./. chr1 100361791 . T . . LowGQX END=100361996 GT ./. chr1 100366141 . A . . LowGQX END=100366459 GT ./. chr1 100368188 . T . . LowGQX END=100368402 GT ./. chr1 100376217 . A . . LowGQX END=100376455 GT ./. chr1 100377910 . G . . LowGQX END=100378125 GT ./. chr1 100379032 . T . . LowGQX END=100379346 GT ./. chr1 100380894 . A . . LowGQX END=100381094 GT ./. chr1 100381915 . A . . LowGQX END=100382339 GT ./. chr1 100387039 . G . . LowGQX END=100387259 GT ./. chr1 100436092 . C . . LowGQX END=100436201 GT ./. chr1 100459092 . G . . LowGQX END=100459300 GT ./. chr1 100464815 . A . . LowGQX END=100465005 GT ./. chr1 100472588 . A . . LowGQX END=100472758 GT ./. chr1 100476919 . A . . LowGQX END=100477092 GT ./. chr1 100480856 . A . . LowGQX END=100480979 GT ./. chr1 100483196 . T . . LowGQX END=100483416 GT ./. chr1 100487938 . T . . LowGQX END=100488038 GT ./. chr1 100503781 . A . . LowGQX END=100503881 GT ./. chr1 100515463 . A . . LowGQX END=100515563 GT ./. chr1 100524204 . T . . LowGQX END=100524304 GT ./. chr1 100525432 . A . . LowGQX END=100525564 GT ./. chr1 100527369 . T . . LowGQX END=100527563 GT ./. chr1 100533531 . A . . LowGQX END=100533754 GT ./. chr1 100534027 . A . . LowGQX END=100534145 GT ./. chr1 100535156 . G . . LowGQX END=100535256 GT ./. chr1 100542719 . A . . LowGQX END=100542889 GT ./. chr1 100544005 . A . . LowGQX END=100544107 GT ./. chr1 100546050 . A . . LowGQX END=100546218 GT ./. chr1 100547557 . A . . LowGQX END=100547768 GT ./. chr1 100550882 . A . . LowGQX END=100550993 GT ./. chr1 100551090 . A . . LowGQX END=100551190 GT ./. chr1 100553693 . A . . LowGQX END=100553795 GT ./. chr1 100568509 . A . . LowGQX END=100568642 GT ./. chr1 100571281 . G . . LowGQX END=100571462 GT ./. chr1 100572406 . T . . LowGQX END=100572559 GT ./. chr1 100572908 . A . . LowGQX END=100573112 GT ./. chr1 100573179 . C . . LowGQX END=100573279 GT ./. chr1 100573364 . A . . LowGQX END=100573563 GT ./. chr1 100575846 . A . . LowGQX END=100576042 GT ./. chr1 100584572 . A . . LowGQX END=100584696 GT ./. chr1 100585933 . A . . LowGQX END=100586033 GT ./. chr1 100586932 . A . . LowGQX END=100587132 GT ./. chr1 100587934 . A . . LowGQX END=100588043 GT ./. chr1 100588704 . A . . LowGQX END=100588856 GT ./. chr1 100591366 . C . . LowGQX END=100591519 GT ./. chr1 100598234 . C . . LowGQX END=100598389 GT ./. chr1 100598723 . T . . LowGQX END=100598874 GT ./. chr1 100602412 . A . . LowGQX END=100602512 GT ./. chr1 100602559 . T . . LowGQX END=100602659 GT ./. chr1 100605133 . A . . LowGQX END=100605287 GT ./. chr1 100605723 . T . . LowGQX END=100605823 GT ./. chr1 100605962 . A . . LowGQX END=100606098 GT ./. chr1 100606406 . A . . LowGQX END=100606578 GT ./. chr1 100608621 . A . . LowGQX END=100608780 GT ./. chr1 100609553 . T . . LowGQX END=100609713 GT ./. chr1 100613448 . A . . LowGQX END=100613885 GT ./. chr1 100614169 . T . . LowGQX END=100614379 GT ./. chr1 100614576 . T . . LowGQX END=100614676 GT ./. chr1 100614853 . T . . LowGQX END=100615008 GT ./. chr1 100617939 . A . . LowGQX END=100618083 GT ./. chr1 100620605 . A . . LowGQX END=100620762 GT ./. chr1 100621726 . A . . LowGQX END=100621876 GT ./. chr1 100623785 . A . . LowGQX END=100623926 GT ./. chr1 100624813 . A . . LowGQX END=100624974 GT ./. chr1 100626020 . A . . LowGQX END=100626130 GT ./. chr1 100633958 . A . . LowGQX END=100634118 GT ./. chr1 100661760 . G . . LowGQX END=100662030 GT ./. chr1 100671735 . T . . LowGQX END=100671909 GT ./. chr1 100671950 . A . . LowGQX END=100672244 GT ./. chr1 100676199 . T . . LowGQX END=100676379 GT ./. chr1 100676619 . T . . LowGQX END=100676719 GT ./. chr1 100680322 . C . . LowGQX END=100680591 GT ./. chr1 100681488 . C . . LowGQX END=100681807 GT ./. chr1 100684131 . C . . LowGQX END=100684355 GT ./. chr1 100696238 . A . . LowGQX END=100696522 GT ./. chr1 100700941 . T . . LowGQX END=100701119 GT ./. chr1 100706266 . A . . LowGQX END=100706492 GT ./. chr1 100715275 . C . . LowGQX END=100715428 GT ./. chr1 100731850 . A . . LowGQX END=100732005 GT ./. chr1 100732078 . A . . LowGQX END=100732185 GT ./. chr1 100733025 . G . . LowGQX END=100733125 GT ./. chr1 100733706 . A . . LowGQX END=100733854 GT ./. chr1 100736111 . A . . LowGQX END=100736239 GT ./. chr1 100738878 . T . . LowGQX END=100739031 GT ./. chr1 100740378 . A . . LowGQX END=100740524 GT ./. chr1 100741153 . A . . LowGQX END=100741282 GT ./. chr1 100742734 . G . . LowGQX END=100742894 GT ./. chr1 100746727 . T . . LowGQX END=100746881 GT ./. chr1 100750782 . A . . LowGQX END=100750882 GT ./. chr1 100752653 . A . . LowGQX END=100752762 GT ./. chr1 100756957 . A . . LowGQX END=100757063 GT ./. chr1 100817289 . A . . LowGQX END=100817389 GT ./. chr1 100818486 . C . . LowGQX END=100818639 GT ./. chr1 100819314 . T . . LowGQX END=100819466 GT ./. chr1 100843090 . C . . LowGQX END=100843190 GT ./. chr1 100856286 . A . . LowGQX END=100856495 GT ./. chr1 100889768 . T . . LowGQX END=100889868 GT ./. chr1 100905472 . T . . LowGQX END=100905572 GT ./. chr1 100908418 . T . . LowGQX END=100908572 GT ./. chr1 100920899 . T . . LowGQX END=100921055 GT ./. chr1 100928205 . A . . LowGQX END=100928440 GT ./. chr1 100933510 . A . . LowGQX END=100933710 GT ./. chr1 100949846 . A . . LowGQX END=100950025 GT ./. chr1 100960372 . A . . LowGQX END=100960489 GT ./. chr1 100961532 . T . . LowGQX END=100961632 GT ./. chr1 100963639 . A . . LowGQX END=100963766 GT ./. chr1 100964483 . A . . LowGQX END=100964938 GT ./. chr1 100970359 . T . . LowGQX END=100970459 GT ./. chr1 100983772 . G . . LowGQX END=100983872 GT ./. chr1 101004511 . G . . LowGQX END=101005681 GT ./. chr1 101185399 . T . . LowGQX END=101185499 GT ./. chr1 101186030 . A . . LowGQX END=101186310 GT ./. chr1 101188574 . A . . LowGQX END=101188899 GT ./. chr1 101190178 . A . . LowGQX END=101190449 GT ./. chr1 101194661 . A . . LowGQX END=101194941 GT ./. chr1 101196752 . A . . LowGQX END=101197077 GT ./. chr1 101197972 . A . . LowGQX END=101198243 GT ./. chr1 101200056 . A . . LowGQX END=101200327 GT ./. chr1 101203677 . A . . LowGQX END=101203842 GT ./. chr1 101339496 . T . . LowGQX END=101339989 GT ./. chr1 101342336 . G . . LowGQX END=101342436 GT ./. chr1 101343030 . A . . LowGQX END=101343462 GT ./. chr1 101343942 . G . . LowGQX END=101344042 GT ./. chr1 101354262 . C . . LowGQX END=101354362 GT ./. chr1 101361809 . G . . LowGQX END=101361909 GT ./. chr1 101362124 . A . . LowGQX END=101362230 GT ./. chr1 101372406 . A . . LowGQX END=101372524 GT ./. chr1 101376613 . C . . LowGQX END=101376713 GT ./. chr1 101377666 . A . . LowGQX END=101377797 GT ./. chr1 101379217 . A . . LowGQX END=101379365 GT ./. chr1 101383609 . T . . LowGQX END=101383709 GT ./. chr1 101387260 . A . . LowGQX END=101387440 GT ./. chr1 101427380 . T . . LowGQX END=101427480 GT ./. chr1 101431293 . T . . LowGQX END=101431477 GT ./. chr1 101437798 . C . . LowGQX END=101437898 GT ./. chr1 101440340 . T . . LowGQX END=101440440 GT ./. chr1 101455962 . G . . LowGQX END=101456190 GT ./. chr1 101458191 . A . . LowGQX END=101458299 GT ./. chr1 101460636 . C . . LowGQX END=101460736 GT ./. chr1 101467021 . A . . LowGQX END=101467146 GT ./. chr1 101479264 . A . . LowGQX END=101479377 GT ./. chr1 101487195 . A . . LowGQX END=101487324 GT ./. chr1 101490863 . A . . LowGQX END=101491002 GT ./. chr1 101704539 . C . . LowGQX END=101705946 GT ./. chr1 102269792 . G . . LowGQX END=102270474 GT ./. chr1 102271630 . A . . LowGQX END=102271741 GT ./. chr1 102278625 . T . . LowGQX END=102278725 GT ./. chr1 102290580 . A . . LowGQX END=102290804 GT ./. chr1 102296196 . T . . LowGQX END=102296386 GT ./. chr1 102302433 . A . . LowGQX END=102302584 GT ./. chr1 102312400 . C . . LowGQX END=102312530 GT ./. chr1 102462289 . A . . LowGQX END=102462389 GT ./. chr1 103343524 . G . . LowGQX END=103343773 GT ./. chr1 103345188 . A . . LowGQX END=103345524 GT ./. chr1 103347202 . G . . LowGQX END=103347373 GT ./. chr1 103348704 . A . . LowGQX END=103348919 GT ./. chr1 103352312 . C . . LowGQX END=103352664 GT ./. chr1 103354080 . G . . LowGQX END=103354527 GT ./. chr1 103354960 . T . . LowGQX END=103355170 GT ./. chr1 103355956 . T . . LowGQX END=103356102 GT ./. chr1 103363628 . A . . LowGQX END=103363786 GT ./. chr1 103364171 . A . . LowGQX END=103364381 GT ./. chr1 103364456 . A . . LowGQX END=103364602 GT ./. chr1 103377652 . A . . LowGQX END=103377820 GT ./. chr1 103379142 . A . . LowGQX END=103379298 GT ./. chr1 103379845 . A . . LowGQX END=103380013 GT ./. chr1 103380209 . C . . LowGQX END=103380409 GT ./. chr1 103381124 . T . . LowGQX END=103381292 GT ./. chr1 103385814 . A . . LowGQX END=103385972 GT ./. chr1 103387021 . T . . LowGQX END=103387179 GT ./. chr1 103388829 . T . . LowGQX END=103388997 GT ./. chr1 103399954 . G . . LowGQX END=103400164 GT ./. chr1 103400563 . T . . LowGQX END=103400721 GT ./. chr1 103404538 . A . . LowGQX END=103404696 GT ./. chr1 103405822 . A . . LowGQX END=103406042 GT ./. chr1 103412354 . T . . LowGQX END=103412564 GT ./. chr1 103427359 . A . . LowGQX END=103427527 GT ./. chr1 103427681 . C . . LowGQX END=103427873 GT ./. chr1 103428158 . A . . LowGQX END=103428368 GT ./. chr1 103430980 . T . . LowGQX END=103431148 GT ./. chr1 103435712 . T . . LowGQX END=103435880 GT ./. chr1 103440323 . T . . LowGQX END=103440491 GT ./. chr1 103444206 . T . . LowGQX END=103444360 GT ./. chr1 103444363 . G . . LowGQX END=103444521 GT ./. chr1 103444548 . A . . LowGQX END=103444712 GT ./. chr1 103444887 . C . . LowGQX END=103445043 GT ./. chr1 103445111 . G . . LowGQX END=103445211 GT ./. chr1 103449643 . A . . LowGQX END=103449799 GT ./. chr1 103453138 . A . . LowGQX END=103453348 GT ./. chr1 103455023 . A . . LowGQX END=103455179 GT ./. chr1 103461369 . A . . LowGQX END=103461650 GT ./. chr1 103462578 . G . . LowGQX END=103462732 GT ./. chr1 103463803 . A . . LowGQX END=103463961 GT ./. chr1 103467430 . G . . LowGQX END=103467577 GT ./. chr1 103467921 . T . . LowGQX END=103468089 GT ./. chr1 103468252 . C . . LowGQX END=103468399 GT ./. chr1 103468708 . G . . LowGQX END=103468876 GT ./. chr1 103469949 . T . . LowGQX END=103470096 GT ./. chr1 103470113 . T . . LowGQX END=103470269 GT ./. chr1 103471341 . T . . LowGQX END=103471499 GT ./. chr1 103471571 . T . . LowGQX END=103471729 GT ./. chr1 103471755 . A . . LowGQX END=103471923 GT ./. chr1 103473968 . C . . LowGQX END=103474124 GT ./. chr1 103477917 . A . . LowGQX END=103478077 GT ./. chr1 103480016 . C . . LowGQX END=103480202 GT ./. chr1 103481173 . A . . LowGQX END=103481350 GT ./. chr1 103483317 . T . . LowGQX END=103483490 GT ./. chr1 103484323 . T . . LowGQX END=103484467 GT ./. chr1 103487212 . G . . LowGQX END=103487377 GT ./. chr1 103488247 . A . . LowGQX END=103488604 GT ./. chr1 103491026 . T . . LowGQX END=103491221 GT ./. chr1 103491305 . G . . LowGQX END=103491560 GT ./. chr1 103491721 . A . . LowGQX END=103491940 GT ./. chr1 103496603 . T . . LowGQX END=103496852 GT ./. chr1 103540123 . C . . LowGQX END=103540388 GT ./. chr1 103544163 . A . . LowGQX END=103544479 GT ./. chr1 103548310 . G . . LowGQX END=103548580 GT ./. chr1 103573578 . G . . LowGQX END=103573786 GT ./. chr1 104068692 . A . . LowGQX END=104068885 GT ./. chr1 104070226 . A . . LowGQX END=104070391 GT ./. chr1 104076310 . A . . LowGQX END=104076480 GT ./. chr1 104077335 . T . . LowGQX END=104077488 GT ./. chr1 104077951 . G . . LowGQX END=104078064 GT ./. chr1 104078732 . G . . LowGQX END=104078832 GT ./. chr1 104079963 . G . . LowGQX END=104080107 GT ./. chr1 104083930 . C . . LowGQX END=104084151 GT ./. chr1 104085917 . G . . LowGQX END=104086070 GT ./. chr1 104087562 . G . . LowGQX END=104087752 GT ./. chr1 104088867 . A . . LowGQX END=104089019 GT ./. chr1 104089578 . T . . LowGQX END=104089678 GT ./. chr1 104093522 . A . . LowGQX END=104093696 GT ./. chr1 104094272 . A . . LowGQX END=104094423 GT ./. chr1 104114223 . A . . LowGQX END=104114395 GT ./. chr1 104114730 . A . . LowGQX END=104114881 GT ./. chr1 104115683 . A . . LowGQX END=104115885 GT ./. chr1 104116328 . A . . LowGQX END=104116563 GT ./. chr1 104116880 . A . . LowGQX END=104117018 GT ./. chr1 104117843 . A . . LowGQX END=104117970 GT ./. chr1 104118061 . A . . LowGQX END=104118165 GT ./. chr1 104120110 . A . . LowGQX END=104120233 GT ./. chr1 104120340 . A . . LowGQX END=104120470 GT ./. chr1 104121931 . A . . LowGQX END=104122125 GT ./. chr1 104160061 . A . . LowGQX END=104160233 GT ./. chr1 104160574 . A . . LowGQX END=104160725 GT ./. chr1 104161491 . C . . LowGQX END=104161733 GT ./. chr1 104162170 . C . . LowGQX END=104162461 GT ./. chr1 104163110 . T . . LowGQX END=104163309 GT ./. chr1 104164156 . T . . LowGQX END=104164324 GT ./. chr1 104164414 . A . . LowGQX END=104164573 GT ./. chr1 104166425 . T . . LowGQX END=104166609 GT ./. chr1 104166675 . A . . LowGQX END=104166886 GT ./. chr1 104168166 . T . . LowGQX END=104168371 GT ./. chr1 104198920 . T . . LowGQX END=104199123 GT ./. chr1 104199433 . A . . LowGQX END=104199615 GT ./. chr1 104200343 . T . . LowGQX END=104200683 GT ./. chr1 104200989 . A . . LowGQX END=104201349 GT ./. chr1 104201999 . G . . LowGQX END=104202168 GT ./. chr1 104202980 . A . . LowGQX END=104203149 GT ./. chr1 104203197 . A . . LowGQX END=104203356 GT ./. chr1 104205236 . A . . LowGQX END=104205400 GT ./. chr1 104205465 . A . . LowGQX END=104205636 GT ./. chr1 104206940 . T . . LowGQX END=104207145 GT ./. chr1 104230058 . T . . LowGQX END=104230263 GT ./. chr1 104231578 . A . . LowGQX END=104231747 GT ./. chr1 104231773 . G . . LowGQX END=104231937 GT ./. chr1 104233863 . G . . LowGQX END=104234235 GT ./. chr1 104235016 . A . . LowGQX END=104235185 GT ./. chr1 104235849 . T . . LowGQX END=104236219 GT ./. chr1 104236528 . T . . LowGQX END=104236868 GT ./. chr1 104237600 . A . . LowGQX END=104237779 GT ./. chr1 104238081 . G . . LowGQX END=104238264 GT ./. chr1 104257454 . T . . LowGQX END=104257554 GT ./. chr1 104258324 . G . . LowGQX END=104258493 GT ./. chr1 104258541 . G . . LowGQX END=104258700 GT ./. chr1 104260552 . A . . LowGQX END=104260732 GT ./. chr1 104260792 . A . . LowGQX END=104260969 GT ./. chr1 104262293 . T . . LowGQX END=104262491 GT ./. chr1 104293059 . T . . LowGQX END=104293262 GT ./. chr1 104293572 . A . . LowGQX END=104293754 GT ./. chr1 104294482 . T . . LowGQX END=104294822 GT ./. chr1 104295128 . A . . LowGQX END=104295488 GT ./. chr1 104296138 . G . . LowGQX END=104296307 GT ./. chr1 104297069 . T . . LowGQX END=104297246 GT ./. chr1 104297275 . C . . LowGQX END=104297494 GT ./. chr1 104299374 . A . . LowGQX END=104299538 GT ./. chr1 104299603 . A . . LowGQX END=104299774 GT ./. chr1 104301078 . T . . LowGQX END=104301283 GT ./. chr1 107599337 . G . . LowGQX END=107600594 GT ./. chr1 107691214 . A . . LowGQX END=107691464 GT ./. chr1 107866902 . A . . LowGQX END=107867547 GT ./. chr1 107937774 . A . . LowGQX END=107937953 GT ./. chr1 107938042 . C . . LowGQX END=107938142 GT ./. chr1 107946155 . A . . LowGQX END=107946315 GT ./. chr1 107950271 . A . . LowGQX END=107950371 GT ./. chr1 107950438 . A . . LowGQX END=107950538 GT ./. chr1 107961185 . T . . LowGQX END=107961285 GT ./. chr1 107963686 . A . . LowGQX END=107963786 GT ./. chr1 107973257 . A . . LowGQX END=107973357 GT ./. chr1 107973371 . G . . LowGQX END=107973540 GT ./. chr1 107979286 . G . . LowGQX END=107979422 GT ./. chr1 107998194 . A . . LowGQX END=107998294 GT ./. chr1 108002978 . T . . LowGQX END=108003078 GT ./. chr1 108023231 . A . . LowGQX END=108023540 GT ./. chr1 108115924 . T . . LowGQX END=108116024 GT ./. chr1 108116667 . A . . LowGQX END=108116823 GT ./. chr1 108119006 . A . . LowGQX END=108119106 GT ./. chr1 108138832 . A . . LowGQX END=108138966 GT ./. chr1 108144953 . T . . LowGQX END=108145167 GT ./. chr1 108145667 . A . . LowGQX END=108145788 GT ./. chr1 108152521 . A . . LowGQX END=108152621 GT ./. chr1 108160172 . A . . LowGQX END=108160272 GT ./. chr1 108185189 . A . . LowGQX END=108185418 GT ./. chr1 108211940 . G . . LowGQX END=108212100 GT ./. chr1 108226083 . T . . LowGQX END=108226183 GT ./. chr1 108230978 . A . . LowGQX END=108231131 GT ./. chr1 108247170 . A . . LowGQX END=108247275 GT ./. chr1 108247580 . A . . LowGQX END=108247686 GT ./. chr1 108291588 . A . . LowGQX END=108291748 GT ./. chr1 108292082 . A . . LowGQX END=108292262 GT ./. chr1 108293677 . A . . LowGQX END=108293832 GT ./. chr1 108298043 . A . . LowGQX END=108298143 GT ./. chr1 108299868 . A . . LowGQX END=108299968 GT ./. chr1 108303404 . A . . LowGQX END=108303504 GT ./. chr1 108307696 . A . . LowGQX END=108307856 GT ./. chr1 108309067 . A . . LowGQX END=108309227 GT ./. chr1 108311048 . C . . LowGQX END=108311148 GT ./. chr1 108313196 . G . . LowGQX END=108313355 GT ./. chr1 108315355 . A . . LowGQX END=108315468 GT ./. chr1 108319781 . A . . LowGQX END=108319936 GT ./. chr1 108322036 . A . . LowGQX END=108322136 GT ./. chr1 108327990 . C . . LowGQX END=108328150 GT ./. chr1 108417521 . A . . LowGQX END=108417642 GT ./. chr1 108507286 . A . . LowGQX END=108507494 GT ./. chr1 108679273 . C . . LowGQX END=108679483 GT ./. chr1 108681678 . A . . LowGQX END=108681833 GT ./. chr1 108686163 . A . . LowGQX END=108686335 GT ./. chr1 108690899 . A . . LowGQX END=108691011 GT ./. chr1 108697603 . A . . LowGQX END=108697760 GT ./. chr1 108700082 . A . . LowGQX END=108700245 GT ./. chr1 108703802 . A . . LowGQX END=108703962 GT ./. chr1 108724501 . A . . LowGQX END=108724657 GT ./. chr1 108728398 . G . . LowGQX END=108728579 GT ./. chr1 108735116 . A . . LowGQX END=108735246 GT ./. chr1 108742550 . C . . LowGQX END=108742763 GT ./. chr1 108766298 . G . . LowGQX END=108766398 GT ./. chr1 108769300 . C . . LowGQX END=108769537 GT ./. chr1 108771541 . C . . LowGQX END=108771779 GT ./. chr1 108774866 . T . . LowGQX END=108775051 GT ./. chr1 108775698 . A . . LowGQX END=108775858 GT ./. chr1 108776842 . A . . LowGQX END=108777034 GT ./. chr1 108777774 . T . . LowGQX END=108777934 GT ./. chr1 108778891 . C . . LowGQX END=108779070 GT ./. chr1 108779571 . T . . LowGQX END=108779726 GT ./. chr1 108779825 . T . . LowGQX END=108779985 GT ./. chr1 108781298 . T . . LowGQX END=108781648 GT ./. chr1 108782388 . T . . LowGQX END=108782539 GT ./. chr1 108783500 . G . . LowGQX END=108783850 GT ./. chr1 108784644 . T . . LowGQX END=108784796 GT ./. chr1 108786194 . T . . LowGQX END=108786405 GT ./. chr1 108993212 . A . . LowGQX END=108993423 GT ./. chr1 108994760 . C . . LowGQX END=108994912 GT ./. chr1 108995731 . C . . LowGQX END=108996081 GT ./. chr1 108996562 . G . . LowGQX END=108996722 GT ./. chr1 108996999 . G . . LowGQX END=108997150 GT ./. chr1 108997946 . T . . LowGQX END=108998286 GT ./. chr1 108999545 . T . . LowGQX END=108999705 GT ./. chr1 108999808 . T . . LowGQX END=108999963 GT ./. chr1 109000526 . T . . LowGQX END=109000698 GT ./. chr1 109001596 . C . . LowGQX END=109001756 GT ./. chr1 109002543 . C . . LowGQX END=109002725 GT ./. chr1 109003671 . C . . LowGQX END=109003831 GT ./. chr1 109004526 . T . . LowGQX END=109004711 GT ./. chr1 109007738 . G . . LowGQX END=109008108 GT ./. chr1 109010037 . G . . LowGQX END=109010288 GT ./. chr1 109013190 . T . . LowGQX END=109013290 GT ./. chr1 109103050 . G . . LowGQX END=109103190 GT ./. chr1 109143186 . A . . LowGQX END=109143311 GT ./. chr1 109148810 . T . . LowGQX END=109148910 GT ./. chr1 109154798 . A . . LowGQX END=109154919 GT ./. chr1 109158922 . A . . LowGQX END=109159078 GT ./. chr1 109167265 . A . . LowGQX END=109167373 GT ./. chr1 109170787 . A . . LowGQX END=109170887 GT ./. chr1 109171015 . A . . LowGQX END=109171209 GT ./. chr1 109171297 . A . . LowGQX END=109171429 GT ./. chr1 109172195 . A . . LowGQX END=109172295 GT ./. chr1 109172398 . G . . LowGQX END=109172498 GT ./. chr1 109173693 . G . . LowGQX END=109173793 GT ./. chr1 109177702 . T . . LowGQX END=109177802 GT ./. chr1 109187282 . T . . LowGQX END=109187382 GT ./. chr1 109191186 . G . . LowGQX END=109191616 GT ./. chr1 109191899 . G . . LowGQX END=109192059 GT ./. chr1 109192617 . T . . LowGQX END=109192717 GT ./. chr1 109192831 . A . . LowGQX END=109193013 GT ./. chr1 109193650 . A . . LowGQX END=109193834 GT ./. chr1 109197336 . A . . LowGQX END=109197475 GT ./. chr1 109198206 . A . . LowGQX END=109198323 GT ./. chr1 109200071 . A . . LowGQX END=109200251 GT ./. chr1 109202447 . C . . LowGQX END=109202547 GT ./. chr1 109235212 . A . . LowGQX END=109235492 GT ./. chr1 109238309 . C . . LowGQX END=109238409 GT ./. chr1 109238663 . A . . LowGQX END=109238819 GT ./. chr1 109238880 . T . . LowGQX END=109238980 GT ./. chr1 109239319 . T . . LowGQX END=109239419 GT ./. chr1 109241224 . A . . LowGQX END=109241452 GT ./. chr1 109241782 . A . . LowGQX END=109242645 GT ./. chr1 109255537 . G . . LowGQX END=109255637 GT ./. chr1 109256059 . T . . LowGQX END=109256159 GT ./. chr1 109260398 . G . . LowGQX END=109260654 GT ./. chr1 109261410 . G . . LowGQX END=109261672 GT ./. chr1 109264956 . G . . LowGQX END=109265217 GT ./. chr1 109268370 . A . . LowGQX END=109268629 GT ./. chr1 109270428 . A . . LowGQX END=109270690 GT ./. chr1 109271252 . A . . LowGQX END=109271511 GT ./. chr1 109273294 . A . . LowGQX END=109273553 GT ./. chr1 109275892 . A . . LowGQX END=109276157 GT ./. chr1 109280025 . C . . LowGQX END=109280182 GT ./. chr1 109284303 . A . . LowGQX END=109284461 GT ./. chr1 109289275 . G . . LowGQX END=109289488 GT ./. chr1 109294854 . A . . LowGQX END=109294954 GT ./. chr1 109295676 . T . . LowGQX END=109295776 GT ./. chr1 109299301 . T . . LowGQX END=109299401 GT ./. chr1 109301070 . A . . LowGQX END=109301222 GT ./. chr1 109302555 . A . . LowGQX END=109302710 GT ./. chr1 109315285 . A . . LowGQX END=109315444 GT ./. chr1 109318953 . A . . LowGQX END=109319053 GT ./. chr1 109321906 . A . . LowGQX END=109322035 GT ./. chr1 109325042 . A . . LowGQX END=109325142 GT ./. chr1 109325250 . A . . LowGQX END=109325350 GT ./. chr1 109336187 . T . . LowGQX END=109336287 GT ./. chr1 109337440 . G . . LowGQX END=109337540 GT ./. chr1 109338854 . A . . LowGQX END=109338997 GT ./. chr1 109339240 . A . . LowGQX END=109339351 GT ./. chr1 109340764 . T . . LowGQX END=109340864 GT ./. chr1 109342770 . T . . LowGQX END=109342935 GT ./. chr1 109349991 . G . . LowGQX END=109350174 GT ./. chr1 109351343 . A . . LowGQX END=109351503 GT ./. chr1 109358791 . A . . LowGQX END=109358927 GT ./. chr1 109359668 . A . . LowGQX END=109359802 GT ./. chr1 109363158 . A . . LowGQX END=109363258 GT ./. chr1 109365774 . G . . LowGQX END=109365894 GT ./. chr1 109365947 . A . . LowGQX END=109366102 GT ./. chr1 109366186 . A . . LowGQX END=109366313 GT ./. chr1 109369825 . A . . LowGQX END=109369927 GT ./. chr1 109373177 . T . . LowGQX END=109373328 GT ./. chr1 109377060 . G . . LowGQX END=109377160 GT ./. chr1 109377518 . T . . LowGQX END=109377729 GT ./. chr1 109380170 . A . . LowGQX END=109380331 GT ./. chr1 109385754 . A . . LowGQX END=109385892 GT ./. chr1 109391356 . C . . LowGQX END=109391456 GT ./. chr1 109391532 . A . . LowGQX END=109391685 GT ./. chr1 109392129 . T . . LowGQX END=109392229 GT ./. chr1 109394292 . A . . LowGQX END=109395289 GT ./. chr1 109428133 . T . . LowGQX END=109428252 GT ./. chr1 109439435 . T . . LowGQX END=109439759 GT ./. chr1 109440063 . T . . LowGQX END=109440301 GT ./. chr1 109440530 . A . . LowGQX END=109440775 GT ./. chr1 109441213 . A . . LowGQX END=109441439 GT ./. chr1 109441450 . T . . LowGQX END=109441668 GT ./. chr1 109444361 . A . . LowGQX END=109444619 GT ./. chr1 109445697 . C . . LowGQX END=109445908 GT ./. chr1 109446696 . C . . LowGQX END=109446928 GT ./. chr1 109456909 . G . . LowGQX END=109457082 GT ./. chr1 109461184 . C . . LowGQX END=109461463 GT ./. chr1 109464988 . A . . LowGQX END=109465250 GT ./. chr1 109466571 . T . . LowGQX END=109466920 GT ./. chr1 109472272 . G . . LowGQX END=109472614 GT ./. chr1 109473977 . A . . LowGQX END=109474108 GT ./. chr1 109477290 . C . . LowGQX END=109477567 GT ./. chr1 109479697 . A . . LowGQX END=109480043 GT ./. chr1 109482256 . A . . LowGQX END=109482407 GT ./. chr1 109482665 . A . . LowGQX END=109482767 GT ./. chr1 109484024 . T . . LowGQX END=109484124 GT ./. chr1 109486095 . A . . LowGQX END=109486285 GT ./. chr1 109486456 . A . . LowGQX END=109486682 GT ./. chr1 109490231 . A . . LowGQX END=109490343 GT ./. chr1 109492440 . A . . LowGQX END=109492600 GT ./. chr1 109492929 . A . . LowGQX END=109493062 GT ./. chr1 109505982 . C . . LowGQX END=109506097 GT ./. chr1 109514050 . C . . LowGQX END=109514197 GT ./. chr1 109517156 . A . . LowGQX END=109517379 GT ./. chr1 109524350 . C . . LowGQX END=109524489 GT ./. chr1 109525229 . A . . LowGQX END=109525404 GT ./. chr1 109525902 . A . . LowGQX END=109526076 GT ./. chr1 109529143 . A . . LowGQX END=109529305 GT ./. chr1 109533864 . C . . LowGQX END=109533964 GT ./. chr1 109538200 . A . . LowGQX END=109538462 GT ./. chr1 109544844 . A . . LowGQX END=109545027 GT ./. chr1 109547212 . A . . LowGQX END=109547343 GT ./. chr1 109553536 . A . . LowGQX END=109554343 GT ./. chr1 109556441 . C . . LowGQX END=109556550 GT ./. chr1 109560078 . T . . LowGQX END=109560232 GT ./. chr1 109565975 . A . . LowGQX END=109566137 GT ./. chr1 109607143 . T . . LowGQX END=109607318 GT ./. chr1 109608705 . T . . LowGQX END=109608857 GT ./. chr1 109617599 . T . . LowGQX END=109617699 GT ./. chr1 109618507 . A . . LowGQX END=109618607 GT ./. chr1 109633390 . C . . LowGQX END=109633550 GT ./. chr1 109635510 . A . . LowGQX END=109635646 GT ./. chr1 109637031 . C . . LowGQX END=109637131 GT ./. chr1 109642815 . G . . LowGQX END=109643237 GT ./. chr1 109648636 . G . . LowGQX END=109648736 GT ./. chr1 109649155 . A . . LowGQX END=109649284 GT ./. chr1 109649627 . A . . LowGQX END=109649747 GT ./. chr1 109650541 . A . . LowGQX END=109650662 GT ./. chr1 109655211 . A . . LowGQX END=109655311 GT ./. chr1 109656228 . G . . LowGQX END=109656328 GT ./. chr1 109656804 . C . . LowGQX END=109656961 GT ./. chr1 109704514 . A . . LowGQX END=109704639 GT ./. chr1 109707119 . A . . LowGQX END=109707316 GT ./. chr1 109714486 . A . . LowGQX END=109714638 GT ./. chr1 109715101 . T . . LowGQX END=109715201 GT ./. chr1 109716094 . A . . LowGQX END=109716204 GT ./. chr1 109716308 . A . . LowGQX END=109716462 GT ./. chr1 109727662 . T . . LowGQX END=109727762 GT ./. chr1 109730797 . A . . LowGQX END=109730979 GT ./. chr1 109731686 . A . . LowGQX END=109731819 GT ./. chr1 109732210 . T . . LowGQX END=109732310 GT ./. chr1 109733986 . A . . LowGQX END=109734096 GT ./. chr1 109734346 . A . . LowGQX END=109734488 GT ./. chr1 109735231 . A . . LowGQX END=109735499 GT ./. chr1 109737041 . A . . LowGQX END=109737219 GT ./. chr1 109740094 . A . . LowGQX END=109740279 GT ./. chr1 109740599 . A . . LowGQX END=109740700 GT ./. chr1 109741193 . A . . LowGQX END=109741299 GT ./. chr1 109742474 . A . . LowGQX END=109742605 GT ./. chr1 109742679 . A . . LowGQX END=109742862 GT ./. chr1 109743355 . A . . LowGQX END=109743525 GT ./. chr1 109743908 . C . . LowGQX END=109744008 GT ./. chr1 109745475 . G . . LowGQX END=109745637 GT ./. chr1 109756613 . A . . LowGQX END=109756753 GT ./. chr1 109766586 . T . . LowGQX END=109766686 GT ./. chr1 109770965 . T . . LowGQX END=109771065 GT ./. chr1 109772034 . A . . LowGQX END=109772197 GT ./. chr1 109773467 . C . . LowGQX END=109773646 GT ./. chr1 109774251 . A . . LowGQX END=109774411 GT ./. chr1 109777830 . A . . LowGQX END=109777919;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 109777920 . T . . LowGQX END=109778056 GT ./. chr1 109778597 . A . . LowGQX END=109778731 GT ./. chr1 109779011 . A . . LowGQX END=109779173 GT ./. chr1 109779410 . G . . LowGQX END=109779510 GT ./. chr1 109779864 . A . . LowGQX END=109780054 GT ./. chr1 109780351 . A . . LowGQX END=109780513 GT ./. chr1 109792700 . A . . LowGQX END=109796014 GT ./. chr1 109801052 . A . . LowGQX END=109801704 GT ./. chr1 109803662 . A . . LowGQX END=109803889 GT ./. chr1 109804133 . A . . LowGQX END=109804253 GT ./. chr1 109804425 . C . . LowGQX END=109804525 GT ./. chr1 109804907 . A . . LowGQX END=109805069 GT ./. chr1 109805426 . A . . LowGQX END=109805594 GT ./. chr1 109805762 . A . . LowGQX END=109805892 GT ./. chr1 109806231 . A . . LowGQX END=109806402 GT ./. chr1 109806698 . A . . LowGQX END=109806990 GT ./. chr1 109807074 . A . . LowGQX END=109807253 GT ./. chr1 109807488 . A . . LowGQX END=109807634 GT ./. chr1 109807811 . A . . LowGQX END=109807936 GT ./. chr1 109808355 . A . . LowGQX END=109808543 GT ./. chr1 109808725 . A . . LowGQX END=109808831 GT ./. chr1 109810168 . A . . LowGQX END=109810268 GT ./. chr1 109810471 . A . . LowGQX END=109810479;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 109810480 . G . . LowGQX . GT ./. chr1 109810481 . G . . LowGQX END=109810500;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 109810501 . G . . LowGQX END=109810502 GT ./. chr1 109810503 . C . . LowGQX END=109810512;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 109810513 . G . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 109810514 . G . . LowGQX END=109810515;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 109810516 . G . . LowGQX . GT ./. chr1 109810517 . C . . LowGQX END=109810518;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 109810519 . C . . LowGQX END=109810520 GT ./. chr1 109810521 . C . . LowGQX . GT:DP:GQX:MQ 0/0:2:3:60 chr1 109810522 . A . . LowGQX . GT ./. chr1 109810523 . G . . LowGQX END=109810531;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 109810532 . C . . LowGQX . GT ./. chr1 109810533 . C . . LowGQX . GT:DP:GQX:MQ 0/0:2:3:60 chr1 109810534 . T . . LowGQX END=109810535 GT ./. chr1 109810536 . C . 33 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 109810537 . T . . LowGQX . GT ./. chr1 109810538 . C . . LowGQX . GT:DP:GQX:MQ 0/0:2:3:60 chr1 109810539 . C . 8.91 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:0.02:60:0 chr1 109810540 . T . . LowGQX END=109810546;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 109810547 . C . . LowGQX END=109810548 GT ./. chr1 109810549 . C . . LowGQX END=109810571;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 109810572 . T C 7.08 LowGQX;LowGQ DP=2;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;MQ=60;MQ0=0;QD=3.54;SB=-0.01;TI=NM_001408;GI=CELSR2;FC=Missense_F2070L;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,2:2:3.01:36,3,0:60:3:1.000 chr1 109810573 . T . . LowGQX END=109810685 GT ./. chr1 109811201 . A . . LowGQX END=109811389 GT ./. chr1 109811500 . A . . LowGQX END=109811633 GT ./. chr1 109811730 . A . . LowGQX END=109811930 GT ./. chr1 109812044 . A . . LowGQX END=109812216 GT ./. chr1 109812314 . A . . LowGQX END=109812445 GT ./. chr1 109812553 . A . . LowGQX END=109812758 GT ./. chr1 109813046 . A . . LowGQX END=109813225 GT ./. chr1 109813547 . A . . LowGQX END=109813664 GT ./. chr1 109813829 . C . . LowGQX END=109813929 GT ./. chr1 109814006 . A . . LowGQX END=109814137 GT ./. chr1 109814220 . A . . LowGQX END=109814347 GT ./. chr1 109814898 . A . . LowGQX END=109815030 GT ./. chr1 109815257 . C . . LowGQX END=109815357 GT ./. chr1 109815453 . A . . LowGQX END=109815652 GT ./. chr1 109815766 . A . . LowGQX END=109815961 GT ./. chr1 109816031 . A . . LowGQX END=109816295 GT ./. chr1 109816608 . T . . LowGQX END=109816708 GT ./. chr1 109822711 . A . . LowGQX END=109822811 GT ./. chr1 109823015 . G . . LowGQX END=109823115 GT ./. chr1 109823397 . A . . LowGQX END=109823876 GT ./. chr1 109824239 . A . . LowGQX END=109824685 GT ./. chr1 109825119 . G . . LowGQX END=109825219 GT ./. chr1 109825261 . C . . LowGQX END=109825361 GT ./. chr1 109836817 . T . . LowGQX END=109836917 GT ./. chr1 109837731 . A . . LowGQX END=109837922 GT ./. chr1 109838854 . A . . LowGQX END=109839034 GT ./. chr1 109839403 . A . . LowGQX END=109839567 GT ./. chr1 109839670 . A . . LowGQX END=109839814 GT ./. chr1 109840042 . A . . LowGQX END=109840242 GT ./. chr1 109840786 . A . . LowGQX END=109840939 GT ./. chr1 109849427 . C . . LowGQX END=109849647 GT ./. chr1 109856623 . T . . LowGQX END=109856723 GT ./. chr1 109856881 . A . . LowGQX END=109857009 GT ./. chr1 109857292 . A . . LowGQX END=109857403 GT ./. chr1 109859470 . A . . LowGQX END=109859583 GT ./. chr1 109860473 . A . . LowGQX END=109860594 GT ./. chr1 109865552 . A . . LowGQX END=109865746 GT ./. chr1 109867519 . A . . LowGQX END=109867714 GT ./. chr1 109869612 . A . . LowGQX END=109869785 GT ./. chr1 109870119 . A . . LowGQX END=109870226 GT ./. chr1 109878860 . A . . LowGQX END=109878971 GT ./. chr1 109883314 . G . . LowGQX END=109883504 GT ./. chr1 109884594 . C . . LowGQX END=109884783 GT ./. chr1 109888371 . A . . LowGQX END=109888506 GT ./. chr1 109890080 . T . . LowGQX END=109890180 GT ./. chr1 109893538 . T . . LowGQX END=109893638 GT ./. chr1 109896987 . A . . LowGQX END=109897156 GT ./. chr1 109897937 . C . . LowGQX END=109898094 GT ./. chr1 109910017 . T . . LowGQX END=109910117 GT ./. chr1 109912132 . A . . LowGQX END=109912232 GT ./. chr1 109940196 . G . . LowGQX END=109940526 GT ./. chr1 109944624 . A . . LowGQX END=109944724 GT ./. chr1 109952544 . A . . LowGQX END=109952644 GT ./. chr1 109953631 . A . . LowGQX END=109953738 GT ./. chr1 109954479 . A . . LowGQX END=109954579 GT ./. chr1 109954697 . A . . LowGQX END=109954809 GT ./. chr1 109955674 . A . . LowGQX END=109955774 GT ./. chr1 109957857 . A . . LowGQX END=109957988 GT ./. chr1 109964410 . A . . LowGQX END=109964566 GT ./. chr1 109968889 . A . . LowGQX END=109968989 GT ./. chr1 110009383 . G . . LowGQX END=110009543 GT ./. chr1 110009608 . G . . LowGQX END=110009769 GT ./. chr1 110018201 . A . . LowGQX END=110018205;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 110018206 . T . . LowGQX END=110018330 GT ./. chr1 110019396 . A . . LowGQX END=110019602 GT ./. chr1 110020438 . A . . LowGQX END=110020695 GT ./. chr1 110021998 . A . . LowGQX END=110022173 GT ./. chr1 110026514 . G . . LowGQX END=110026743 GT ./. chr1 110028662 . C . . LowGQX END=110028762 GT ./. chr1 110029126 . A . . LowGQX END=110029235 GT ./. chr1 110029627 . A . . LowGQX END=110029842 GT ./. chr1 110030234 . A . . LowGQX END=110030429 GT ./. chr1 110030943 . C . . LowGQX END=110031097 GT ./. chr1 110031467 . A . . LowGQX END=110031725 GT ./. chr1 110032519 . A . . LowGQX END=110032753 GT ./. chr1 110032891 . A . . LowGQX END=110033017 GT ./. chr1 110033542 . A . . LowGQX END=110034342 GT ./. chr1 110035166 . C . . LowGQX END=110035266 GT ./. chr1 110036760 . C . . LowGQX END=110036912 GT ./. chr1 110037080 . A . . LowGQX END=110037246 GT ./. chr1 110037734 . A . . LowGQX END=110037834 GT ./. chr1 110038300 . G . . LowGQX END=110038884 GT ./. chr1 110044960 . A . . LowGQX END=110045060 GT ./. chr1 110050051 . G . . LowGQX END=110051537 GT ./. chr1 110085256 . G . . LowGQX END=110085608 GT ./. chr1 110085611 . A . . LowGQX END=110087003 GT ./. chr1 110091341 . C . . LowGQX END=110091463 GT ./. chr1 110116331 . T . . LowGQX END=110116431 GT ./. chr1 110116516 . A . . LowGQX END=110116662 GT ./. chr1 110121824 . A . . LowGQX END=110121986 GT ./. chr1 110125057 . A . . LowGQX END=110125190 GT ./. chr1 110128836 . A . . LowGQX END=110128970 GT ./. chr1 110129349 . A . . LowGQX END=110129559 GT ./. chr1 110134663 . A . . LowGQX END=110134858 GT ./. chr1 110141503 . C . . LowGQX END=110141603 GT ./. chr1 110145925 . A . . LowGQX END=110146218 GT ./. chr1 110146522 . G . . LowGQX END=110146778 GT ./. chr1 110148541 . T . . LowGQX END=110148773 GT ./. chr1 110148879 . T . . LowGQX END=110149110 GT ./. chr1 110151202 . G . . LowGQX END=110151462 GT ./. chr1 110152611 . C . . LowGQX END=110152855 GT ./. chr1 110153028 . C . . LowGQX END=110153181 GT ./. chr1 110155324 . A . . LowGQX END=110155544 GT ./. chr1 110162786 . G . . LowGQX END=110162946 GT ./. chr1 110163634 . A . . LowGQX END=110164045 GT ./. chr1 110164807 . A . . LowGQX END=110164941 GT ./. chr1 110167923 . A . . LowGQX END=110168058 GT ./. chr1 110168255 . C . . LowGQX END=110168417 GT ./. chr1 110168767 . C . . LowGQX END=110168867 GT ./. chr1 110168939 . A . . LowGQX END=110169099 GT ./. chr1 110169346 . A . . LowGQX END=110169537 GT ./. chr1 110169748 . G . . LowGQX END=110169941 GT ./. chr1 110170046 . G . . LowGQX END=110170146 GT ./. chr1 110170394 . A . . LowGQX END=110170528 GT ./. chr1 110170703 . A . . LowGQX END=110170902 GT ./. chr1 110170984 . A . . LowGQX END=110171120 GT ./. chr1 110171263 . A . . LowGQX END=110171431 GT ./. chr1 110171729 . A . . LowGQX END=110171860 GT ./. chr1 110171947 . A . . LowGQX END=110172115 GT ./. chr1 110172416 . A . . LowGQX END=110172541 GT ./. chr1 110172853 . A . . LowGQX END=110173062 GT ./. chr1 110173303 . A . . LowGQX END=110173418 GT ./. chr1 110173563 . A . . LowGQX END=110173777 GT ./. chr1 110198920 . C . . LowGQX END=110199080 GT ./. chr1 110199332 . A . . LowGQX END=110199547 GT ./. chr1 110199820 . C . . LowGQX END=110199920 GT ./. chr1 110200157 . G . . LowGQX END=110200296 GT ./. chr1 110200392 . A . . LowGQX END=110200497 GT ./. chr1 110201434 . A . . LowGQX END=110201534 GT ./. chr1 110201620 . A . . LowGQX END=110201898 GT ./. chr1 110203782 . C . . LowGQX END=110203882 GT ./. chr1 110207594 . C . . LowGQX END=110207694 GT ./. chr1 110210646 . C . . LowGQX END=110210806 GT ./. chr1 110211035 . C . . LowGQX END=110211135 GT ./. chr1 110211530 . C . . LowGQX END=110211630 GT ./. chr1 110211903 . T . . LowGQX END=110212003 GT ./. chr1 110212091 . A . . LowGQX END=110212196 GT ./. chr1 110213907 . A . . LowGQX END=110214007 GT ./. chr1 110214093 . A . . LowGQX END=110214208 GT ./. chr1 110215782 . G . . LowGQX END=110215882 GT ./. chr1 110217364 . C . . LowGQX END=110217516 GT ./. chr1 110224385 . A . . LowGQX END=110224485 GT ./. chr1 110230404 . A . . LowGQX END=110230564 GT ./. chr1 110230729 . C . . LowGQX END=110230880 GT ./. chr1 110231218 . G . . LowGQX END=110231378 GT ./. chr1 110231581 . C . . LowGQX END=110231754 GT ./. chr1 110231845 . A . . LowGQX END=110232004 GT ./. chr1 110232891 . A . . LowGQX END=110233189 GT ./. chr1 110235823 . C . . LowGQX END=110235975 GT ./. chr1 110251101 . A . . LowGQX END=110251201 GT ./. chr1 110254843 . C . . LowGQX END=110255003 GT ./. chr1 110255228 . C . . LowGQX END=110255328 GT ./. chr1 110255724 . C . . LowGQX END=110255824 GT ./. chr1 110256048 . G . . LowGQX END=110256190 GT ./. chr1 110256281 . A . . LowGQX END=110256386 GT ./. chr1 110257567 . A . . LowGQX END=110257667 GT ./. chr1 110257750 . A . . LowGQX END=110258028 GT ./. chr1 110259954 . C . . LowGQX END=110260054 GT ./. chr1 110279691 . G . . LowGQX END=110279794 GT ./. chr1 110280001 . A . . LowGQX END=110280192 GT ./. chr1 110280276 . A . . LowGQX END=110280376 GT ./. chr1 110280711 . A . . LowGQX END=110280816 GT ./. chr1 110280898 . C . . LowGQX END=110280998 GT ./. chr1 110282034 . C . . LowGQX END=110282134 GT ./. chr1 110282443 . G . . LowGQX END=110282543 GT ./. chr1 110282809 . T . . LowGQX END=110282977 GT ./. chr1 110292969 . T . . LowGQX END=110293069 GT ./. chr1 110293280 . A . . LowGQX END=110293417 GT ./. chr1 110293887 . G . . LowGQX END=110293987 GT ./. chr1 110294243 . T . . LowGQX END=110294407 GT ./. chr1 110294615 . A . . LowGQX END=110294818 GT ./. chr1 110295276 . A . . LowGQX END=110295376 GT ./. chr1 110295670 . G . . LowGQX END=110295830 GT ./. chr1 110299616 . G . . LowGQX END=110299790 GT ./. chr1 110300091 . C . . LowGQX END=110300191 GT ./. chr1 110300405 . C . . LowGQX END=110300505 GT ./. chr1 110300564 . A . . LowGQX END=110300683 GT ./. chr1 110300896 . G . . LowGQX END=110301078 GT ./. chr1 110301144 . A . . LowGQX END=110301291 GT ./. chr1 110301662 . G . . LowGQX END=110301762 GT ./. chr1 110301858 . A . . LowGQX END=110302012 GT ./. chr1 110302298 . A . . LowGQX END=110302461 GT ./. chr1 110304100 . G . . LowGQX END=110304200 GT ./. chr1 110304307 . G . . LowGQX END=110304407 GT ./. chr1 110452970 . C . . LowGQX END=110453070 GT ./. chr1 110453556 . C . . LowGQX END=110453716 GT ./. chr1 110456879 . A . . LowGQX END=110457006 GT ./. chr1 110458238 . G . . LowGQX END=110458338 GT ./. chr1 110459913 . A . . LowGQX END=110460088 GT ./. chr1 110464467 . A . . LowGQX END=110464619 GT ./. chr1 110465786 . A . . LowGQX END=110466815 GT ./. chr1 110467375 . G . . LowGQX END=110467475 GT ./. chr1 110467741 . T . . LowGQX END=110467841 GT ./. chr1 110527673 . G . . LowGQX END=110527843 GT ./. chr1 110551654 . A . . LowGQX END=110551770 GT ./. chr1 110553834 . A . . LowGQX END=110553982 GT ./. chr1 110554982 . A . . LowGQX END=110555087 GT ./. chr1 110555517 . A . . LowGQX END=110555624 GT ./. chr1 110557383 . A . . LowGQX END=110557483 GT ./. chr1 110558045 . A . . LowGQX END=110558156 GT ./. chr1 110558964 . A . . LowGQX END=110559085 GT ./. chr1 110559271 . C . . LowGQX END=110559371 GT ./. chr1 110560112 . T . . LowGQX END=110560212 GT ./. chr1 110560554 . T . . LowGQX END=110560654 GT ./. chr1 110560993 . A . . LowGQX END=110561093 GT ./. chr1 110561172 . A . . LowGQX END=110561275 GT ./. chr1 110561658 . C . . LowGQX END=110561758 GT ./. chr1 110562160 . C . . LowGQX END=110562260 GT ./. chr1 110563351 . A . . LowGQX END=110563476 GT ./. chr1 110564250 . C . . LowGQX END=110564350 GT ./. chr1 110577247 . T . . LowGQX END=110577442 GT ./. chr1 110580498 . T . . LowGQX END=110580598 GT ./. chr1 110581293 . T . . LowGQX END=110581393 GT ./. chr1 110581792 . A . . LowGQX END=110581931 GT ./. chr1 110582015 . A . . LowGQX END=110582140 GT ./. chr1 110582425 . A . . LowGQX END=110582584 GT ./. chr1 110583242 . C . . LowGQX END=110583342 GT ./. chr1 110584156 . A . . LowGQX END=110584267 GT ./. chr1 110584354 . A . . LowGQX END=110584486 GT ./. chr1 110585708 . A . . LowGQX END=110585895 GT ./. chr1 110586209 . C . . LowGQX END=110586549 GT ./. chr1 110587445 . T . . LowGQX END=110587545 GT ./. chr1 110587619 . G . . LowGQX END=110587719 GT ./. chr1 110589288 . A . . LowGQX END=110589388 GT ./. chr1 110590152 . T . . LowGQX END=110590252 GT ./. chr1 110590392 . A . . LowGQX END=110590494 GT ./. chr1 110591732 . A . . LowGQX END=110591863 GT ./. chr1 110592080 . A . . LowGQX END=110592185 GT ./. chr1 110592949 . C . . LowGQX END=110593049 GT ./. chr1 110593576 . A . . LowGQX END=110593685 GT ./. chr1 110594303 . A . . LowGQX END=110594512 GT ./. chr1 110596285 . A . . LowGQX END=110596537 GT ./. chr1 110603304 . T . . LowGQX END=110603715 GT ./. chr1 110604006 . T . . LowGQX END=110604237 GT ./. chr1 110607158 . T . . LowGQX END=110607577 GT ./. chr1 110612907 . G . . LowGQX END=110613286 GT ./. chr1 110655155 . C . . LowGQX END=110655684 GT ./. chr1 110709550 . C . . LowGQX END=110709840 GT ./. chr1 110714680 . A . . LowGQX END=110714842 GT ./. chr1 110716593 . A . . LowGQX END=110716724 GT ./. chr1 110717399 . A . . LowGQX END=110717585 GT ./. chr1 110719197 . G . . LowGQX END=110719364 GT ./. chr1 110734592 . A . . LowGQX END=110734838 GT ./. chr1 110735126 . A . . LowGQX END=110735323 GT ./. chr1 110737199 . A . . LowGQX END=110737468 GT ./. chr1 110738206 . A . . LowGQX END=110738370 GT ./. chr1 110740057 . A . . LowGQX END=110740224 GT ./. chr1 110740696 . A . . LowGQX END=110741069 GT ./. chr1 110754120 . T . . LowGQX END=110754808 GT ./. chr1 110765584 . A . . LowGQX END=110766657 GT ./. chr1 110768595 . A . . LowGQX END=110768941 GT ./. chr1 110774838 . G . . LowGQX END=110774938 GT ./. chr1 110775449 . C . . LowGQX END=110775614 GT ./. chr1 110876470 . T . . LowGQX END=110876570 GT ./. chr1 110882026 . C . . LowGQX END=110884902 GT ./. chr1 110888089 . C . . LowGQX END=110888247 GT ./. chr1 110888903 . T . . LowGQX END=110889003 GT ./. chr1 110906386 . T . . LowGQX END=110906536 GT ./. chr1 110918060 . G . . LowGQX END=110918176 GT ./. chr1 110919570 . A . . LowGQX END=110919786 GT ./. chr1 110921473 . A . . LowGQX END=110921981 GT ./. chr1 110923602 . A . . LowGQX END=110923768 GT ./. chr1 110924272 . A . . LowGQX END=110924452 GT ./. chr1 110925454 . A . . LowGQX END=110925591 GT ./. chr1 110931797 . A . . LowGQX END=110931953 GT ./. chr1 110944126 . T . . LowGQX END=110944226 GT ./. chr1 110946539 . A . . LowGQX END=110946661 GT ./. chr1 110948921 . T . . LowGQX END=110949021 GT ./. chr1 110949621 . T . . LowGQX END=110949721 GT ./. chr1 110950206 . A . . LowGQX END=110950491 GT ./. chr1 110993788 . G . . LowGQX END=110993962 GT ./. chr1 110996532 . C . . LowGQX END=110996760 GT ./. chr1 110998803 . G . . LowGQX END=110999025 GT ./. chr1 111059872 . G . . LowGQX END=111061412 GT ./. chr1 111136483 . G . . LowGQX END=111136583 GT ./. chr1 111144651 . C . . LowGQX END=111144793 GT ./. chr1 111145903 . A . . LowGQX END=111147407 GT ./. chr1 111215702 . T . . LowGQX END=111217443 GT ./. chr1 111434013 . G . . LowGQX END=111434113 GT ./. chr1 111434945 . G . . LowGQX END=111435158 GT ./. chr1 111436937 . G . . LowGQX END=111437037 GT ./. chr1 111437580 . A . . LowGQX END=111437680 GT ./. chr1 111439213 . T . . LowGQX END=111439366 GT ./. chr1 111440423 . T . . LowGQX END=111440523 GT ./. chr1 111441732 . A . . LowGQX END=111441832 GT ./. chr1 111490579 . T . . LowGQX END=111491024 GT ./. chr1 111492471 . A . . LowGQX END=111492748 GT ./. chr1 111493908 . A . . LowGQX END=111495440 GT ./. chr1 111506227 . C . . LowGQX END=111506327 GT ./. chr1 111660726 . A . . LowGQX END=111660892 GT ./. chr1 111661424 . T . . LowGQX END=111661524 GT ./. chr1 111662491 . G . . LowGQX END=111662591 GT ./. chr1 111663136 . A . . LowGQX END=111663318 GT ./. chr1 111667322 . A . . LowGQX END=111667506 GT ./. chr1 111668833 . C . . LowGQX END=111668933 GT ./. chr1 111674044 . A . . LowGQX END=111674179 GT ./. chr1 111690335 . C . . LowGQX END=111690678 GT ./. chr1 111701980 . C . . LowGQX END=111702185 GT ./. chr1 111703735 . T . . LowGQX END=111703921 GT ./. chr1 111717494 . T . . LowGQX END=111717594 GT ./. chr1 111724807 . A . . LowGQX END=111724997 GT ./. chr1 111725419 . A . . LowGQX END=111725582 GT ./. chr1 111726082 . A . . LowGQX END=111726212 GT ./. chr1 111726811 . A . . LowGQX END=111726935 GT ./. chr1 111730216 . C . . LowGQX END=111730316 GT ./. chr1 111730751 . A . . LowGQX END=111730995 GT ./. chr1 111731317 . G . . LowGQX END=111731417 GT ./. chr1 111731805 . C . . LowGQX END=111731905 GT ./. chr1 111734760 . A . . LowGQX END=111734942 GT ./. chr1 111737198 . A . . LowGQX END=111737351 GT ./. chr1 111738505 . C . . LowGQX END=111738681 GT ./. chr1 111739787 . C . . LowGQX END=111739887 GT ./. chr1 111740527 . C . . LowGQX END=111740627 GT ./. chr1 111741250 . A . . LowGQX END=111741367 GT ./. chr1 111742243 . A . . LowGQX END=111742423 GT ./. chr1 111742999 . G . . LowGQX END=111743099 GT ./. chr1 111746837 . A . . LowGQX END=111746997 GT ./. chr1 111770322 . T . . LowGQX END=111770422 GT ./. chr1 111772439 . C . . LowGQX END=111772539 GT ./. chr1 111773362 . A . . LowGQX END=111773568 GT ./. chr1 111773788 . G . . LowGQX END=111773939 GT ./. chr1 111777527 . A . . LowGQX END=111777682 GT ./. chr1 111778259 . A . . LowGQX END=111778388 GT ./. chr1 111778644 . A . . LowGQX END=111778778 GT ./. chr1 111781340 . A . . LowGQX END=111781557 GT ./. chr1 111783897 . A . . LowGQX END=111784068 GT ./. chr1 111784816 . G . . LowGQX END=111784989 GT ./. chr1 111785791 . C . . LowGQX END=111785891 GT ./. chr1 111833479 . T . . LowGQX END=111833579 GT ./. chr1 111853053 . T . . LowGQX END=111853153 GT ./. chr1 111854276 . T . . LowGQX END=111854376 GT ./. chr1 111854810 . A . . LowGQX END=111855016 GT ./. chr1 111857141 . T . . LowGQX END=111857241 GT ./. chr1 111857890 . A . . LowGQX END=111858060 GT ./. chr1 111858356 . A . . LowGQX END=111858495 GT ./. chr1 111860301 . A . . LowGQX END=111860430 GT ./. chr1 111860606 . A . . LowGQX END=111860734 GT ./. chr1 111861113 . A . . LowGQX END=111861303 GT ./. chr1 111861740 . A . . LowGQX END=111861864 GT ./. chr1 111861947 . A . . LowGQX END=111862093 GT ./. chr1 111862833 . A . . LowGQX END=111863091 GT ./. chr1 111889235 . T . . LowGQX END=111889335 GT ./. chr1 111889530 . A . . LowGQX END=111889674 GT ./. chr1 111890294 . A . . LowGQX END=111890397 GT ./. chr1 111891136 . A . . LowGQX END=111891271 GT ./. chr1 111892726 . A . . LowGQX END=111892848 GT ./. chr1 111893806 . T . . LowGQX END=111893966 GT ./. chr1 111957084 . G . . LowGQX END=111957969 GT ./. chr1 111958943 . A . . LowGQX END=111959083 GT ./. chr1 111962230 . A . . LowGQX END=111962351 GT ./. chr1 111963896 . A . . LowGQX END=111964086 GT ./. chr1 111964185 . A . . LowGQX END=111964298 GT ./. chr1 111965547 . A . . LowGQX END=111965676 GT ./. chr1 111966163 . A . . LowGQX END=111966333 GT ./. chr1 111968003 . A . . LowGQX END=111968128 GT ./. chr1 111969046 . A . . LowGQX END=111969445 GT ./. chr1 111969649 . C . . LowGQX END=111969749 GT ./. chr1 111970282 . T . . LowGQX END=111970382 GT ./. chr1 111983850 . A . . LowGQX END=111984014 GT ./. chr1 111984645 . A . . LowGQX END=111984752 GT ./. chr1 111985273 . A . . LowGQX END=111985386 GT ./. chr1 111985931 . A . . LowGQX END=111986031 GT ./. chr1 111986467 . C . . LowGQX END=111986567 GT ./. chr1 111986662 . G . . LowGQX END=111986762 GT ./. chr1 111989692 . G . . LowGQX END=111989792 GT ./. chr1 111990055 . A . . LowGQX END=111990201 GT ./. chr1 111991219 . G . . LowGQX END=111991575 GT ./. chr1 111991628 . C . . LowGQX END=111991794 GT ./. chr1 111991817 . A . . LowGQX END=111992206 GT ./. chr1 111992428 . C . . LowGQX END=111992528 GT ./. chr1 111996831 . A . . LowGQX END=111996981 GT ./. chr1 111998706 . A . . LowGQX END=111998874 GT ./. chr1 111999250 . A . . LowGQX END=111999380 GT ./. chr1 112002077 . A . . LowGQX END=112002261 GT ./. chr1 112003528 . C . . LowGQX END=112003628 GT ./. chr1 112018620 . A . . LowGQX END=112018720 GT ./. chr1 112019405 . T . . LowGQX END=112019505 GT ./. chr1 112019954 . A . . LowGQX END=112020054 GT ./. chr1 112020271 . A . . LowGQX END=112020400 GT ./. chr1 112020603 . A . . LowGQX END=112020748 GT ./. chr1 112026237 . G . . LowGQX END=112026395 GT ./. chr1 112028360 . A . . LowGQX END=112028465 GT ./. chr1 112029192 . C . . LowGQX END=112029292 GT ./. chr1 112031297 . A . . LowGQX END=112031649 GT ./. chr1 112032217 . C . . LowGQX END=112032317 GT ./. chr1 112033276 . A . . LowGQX END=112033387 GT ./. chr1 112042570 . A . . LowGQX END=112043181 GT ./. chr1 112045625 . A . . LowGQX END=112045979 GT ./. chr1 112106466 . A . . LowGQX END=112106577 GT ./. chr1 112233962 . A . . LowGQX END=112234062 GT ./. chr1 112237891 . A . . LowGQX END=112238048 GT ./. chr1 112240042 . T . . LowGQX END=112240142 GT ./. chr1 112245956 . A . . LowGQX END=112246101 GT ./. chr1 112246963 . A . . LowGQX END=112247111 GT ./. chr1 112251765 . A . . LowGQX END=112251865 GT ./. chr1 112265637 . C . . LowGQX END=112265797 GT ./. chr1 112269577 . C . . LowGQX END=112270457 GT ./. chr1 112281787 . C . . LowGQX END=112281887 GT ./. chr1 112298279 . C . . LowGQX END=112298379 GT ./. chr1 112298545 . C . . LowGQX END=112298850 GT ./. chr1 112299266 . A . . LowGQX END=112299366 GT ./. chr1 112302020 . A . . LowGQX END=112302193 GT ./. chr1 112303094 . A . . LowGQX END=112303213 GT ./. chr1 112303326 . A . . LowGQX END=112303473 GT ./. chr1 112303607 . A . . LowGQX END=112303750 GT ./. chr1 112303828 . A . . LowGQX END=112303928 GT ./. chr1 112304869 . C . . LowGQX END=112304969 GT ./. chr1 112305297 . A . . LowGQX END=112305407 GT ./. chr1 112305493 . A . . LowGQX END=112305632 GT ./. chr1 112308357 . A . . LowGQX END=112309524 GT ./. chr1 112318648 . G . . LowGQX END=112318988 GT ./. chr1 112319597 . G . . LowGQX END=112319947 GT ./. chr1 112321007 . C . . LowGQX END=112321166 GT ./. chr1 112322796 . A . . LowGQX END=112322988 GT ./. chr1 112323261 . A . . LowGQX END=112323465 GT ./. chr1 112329515 . G . . LowGQX END=112329780 GT ./. chr1 112524192 . C . . LowGQX END=112525400 GT ./. chr1 112533519 . A . . LowGQX END=112533810 GT ./. chr1 112539043 . T . . LowGQX END=112539143 GT ./. chr1 112958736 . A . . LowGQX END=112958889 GT ./. chr1 112991562 . A . . LowGQX END=112991797 GT ./. chr1 112997069 . A . . LowGQX END=112997181 GT ./. chr1 112998551 . A . . LowGQX END=113000037 GT ./. chr1 113010137 . T . . LowGQX END=113010237 GT ./. chr1 113033619 . T . . LowGQX END=113033719 GT ./. chr1 113051863 . C . . LowGQX END=113051935;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 113051936 . G . . LowGQX END=113052083 GT ./. chr1 113057494 . A . . LowGQX END=113057719 GT ./. chr1 113058760 . A . . LowGQX END=113059042 GT ./. chr1 113059741 . A . . LowGQX END=113060010 GT ./. chr1 113062900 . A . . LowGQX END=113063134 GT ./. chr1 113068633 . G . . LowGQX END=113068736 GT ./. chr1 113083425 . G . . LowGQX END=113083525 GT ./. chr1 113084532 . T . . LowGQX END=113084715 GT ./. chr1 113093220 . T . . LowGQX END=113093320 GT ./. chr1 113098488 . A . . LowGQX END=113098643 GT ./. chr1 113113308 . A . . LowGQX END=113113408 GT ./. chr1 113113885 . A . . LowGQX END=113113985 GT ./. chr1 113119606 . A . . LowGQX END=113119713 GT ./. chr1 113120954 . T . . LowGQX END=113121054 GT ./. chr1 113124562 . T . . LowGQX END=113124731 GT ./. chr1 113124995 . A . . LowGQX END=113125097 GT ./. chr1 113126592 . A . . LowGQX END=113126751 GT ./. chr1 113134085 . T . . LowGQX END=113134237 GT ./. chr1 113140591 . A . . LowGQX END=113140711 GT ./. chr1 113143334 . A . . LowGQX END=113143494 GT ./. chr1 113153461 . A . . LowGQX END=113153628 GT ./. chr1 113159373 . A . . LowGQX END=113159527 GT ./. chr1 113160597 . A . . LowGQX END=113160697 GT ./. chr1 113161529 . A . . LowGQX END=113161738 GT ./. chr1 113162437 . C . . LowGQX END=113162537 GT ./. chr1 113189814 . A . . LowGQX END=113189914 GT ./. chr1 113192016 . C . . LowGQX END=113192168 GT ./. chr1 113196148 . T . . LowGQX END=113196302 GT ./. chr1 113197085 . A . . LowGQX END=113197296 GT ./. chr1 113201634 . C . . LowGQX END=113201734 GT ./. chr1 113202313 . G . . LowGQX END=113202413 GT ./. chr1 113209682 . A . . LowGQX END=113209782 GT ./. chr1 113212093 . C . . LowGQX END=113212247 GT ./. chr1 113212612 . A . . LowGQX END=113212757 GT ./. chr1 113217502 . G . . LowGQX END=113217713 GT ./. chr1 113229555 . G . . LowGQX END=113229655 GT ./. chr1 113231555 . A . . LowGQX END=113231763 GT ./. chr1 113232035 . A . . LowGQX END=113232275 GT ./. chr1 113232460 . A . . LowGQX END=113232723 GT ./. chr1 113234285 . A . . LowGQX END=113234424 GT ./. chr1 113235381 . A . . LowGQX END=113235554 GT ./. chr1 113236638 . A . . LowGQX END=113236797 GT ./. chr1 113237053 . T . . LowGQX END=113237254 GT ./. chr1 113237369 . A . . LowGQX END=113237521 GT ./. chr1 113238036 . A . . LowGQX END=113238199 GT ./. chr1 113238768 . A . . LowGQX END=113238920 GT ./. chr1 113239057 . A . . LowGQX END=113239159 GT ./. chr1 113239250 . A . . LowGQX END=113239471 GT ./. chr1 113240614 . A . . LowGQX END=113240736 GT ./. chr1 113240907 . A . . LowGQX END=113241103 GT ./. chr1 113241325 . C . . LowGQX END=113241425 GT ./. chr1 113242305 . A . . LowGQX END=113242435 GT ./. chr1 113242511 . T . . LowGQX END=113242611 GT ./. chr1 113242839 . A . . LowGQX END=113242965 GT ./. chr1 113243034 . C . . LowGQX END=113243134 GT ./. chr1 113243162 . A . . LowGQX END=113243362 GT ./. chr1 113244082 . C . . LowGQX END=113244338 GT ./. chr1 113245183 . A . . LowGQX END=113245318 GT ./. chr1 113245619 . A . . LowGQX END=113245744 GT ./. chr1 113246009 . C . . LowGQX END=113246109 GT ./. chr1 113246264 . A . . LowGQX END=113246429 GT ./. chr1 113247707 . G . . LowGQX END=113247807 GT ./. chr1 113248195 . A . . LowGQX END=113248295 GT ./. chr1 113252752 . G . . LowGQX END=113252963 GT ./. chr1 113253080 . A . . LowGQX END=113253236 GT ./. chr1 113253364 . A . . LowGQX END=113253476 GT ./. chr1 113253612 . C . . LowGQX END=113253712 GT ./. chr1 113253886 . A . . LowGQX END=113254009 GT ./. chr1 113254586 . T . . LowGQX END=113254686 GT ./. chr1 113254965 . A . . LowGQX END=113255082 GT ./. chr1 113255364 . A . . LowGQX END=113255656 GT ./. chr1 113256117 . A . . LowGQX END=113256236 GT ./. chr1 113257596 . A . . LowGQX END=113257926 GT ./. chr1 113264854 . G . . LowGQX END=113264973 GT ./. chr1 113265636 . A . . LowGQX END=113265790 GT ./. chr1 113266555 . C . . LowGQX END=113266762 GT ./. chr1 113269227 . C . . LowGQX END=113269327 GT ./. chr1 113456462 . T . . LowGQX END=113456839 GT ./. chr1 113459717 . A . . LowGQX END=113460718 GT ./. chr1 113464561 . A . . LowGQX END=113464807 GT ./. chr1 113471663 . A . . LowGQX END=113471982 GT ./. chr1 113616027 . A . . LowGQX END=113616270 GT ./. chr1 113633923 . A . . LowGQX END=113634023 GT ./. chr1 113635756 . A . . LowGQX END=113635916 GT ./. chr1 113636050 . A . . LowGQX END=113636189 GT ./. chr1 113636959 . A . . LowGQX END=113637107 GT ./. chr1 113637232 . A . . LowGQX END=113637380 GT ./. chr1 113638494 . A . . LowGQX END=113638642 GT ./. chr1 113638842 . A . . LowGQX END=113638990 GT ./. chr1 113641318 . T . . LowGQX END=113641418 GT ./. chr1 113642819 . T . . LowGQX END=113642919 GT ./. chr1 113643027 . T . . LowGQX END=113643127 GT ./. chr1 113650214 . A . . LowGQX END=113650404 GT ./. chr1 113652862 . A . . LowGQX END=113653187 GT ./. chr1 113655099 . A . . LowGQX END=113655385 GT ./. chr1 113657047 . A . . LowGQX END=113657501 GT ./. chr1 113658907 . A . . LowGQX END=113659061 GT ./. chr1 113661853 . A . . LowGQX END=113662148 GT ./. chr1 113666495 . A . . LowGQX END=113666726 GT ./. chr1 113933643 . A . . LowGQX END=113933983 GT ./. chr1 114092135 . A . . LowGQX END=114092256 GT ./. chr1 114123162 . A . . LowGQX END=114123286 GT ./. chr1 114128007 . A . . LowGQX END=114128221 GT ./. chr1 114133084 . T . . LowGQX END=114133283 GT ./. chr1 114137093 . T . . LowGQX END=114137193 GT ./. chr1 114157151 . A . . LowGQX END=114157302 GT ./. chr1 114161082 . T . . LowGQX END=114161241 GT ./. chr1 114162356 . A . . LowGQX END=114162456 GT ./. chr1 114165416 . A . . LowGQX END=114165619 GT ./. chr1 114184531 . A . . LowGQX END=114185141 GT ./. chr1 114186331 . C . . LowGQX END=114186431 GT ./. chr1 114189106 . A . . LowGQX END=114189267 GT ./. chr1 114191855 . T . . LowGQX END=114191955 GT ./. chr1 114193624 . T . . LowGQX END=114193831 GT ./. chr1 114196450 . A . . LowGQX END=114196643 GT ./. chr1 114201700 . A . . LowGQX END=114201900 GT ./. chr1 114214354 . A . . LowGQX END=114214461 GT ./. chr1 114215235 . A . . LowGQX END=114215366 GT ./. chr1 114215882 . T . . LowGQX END=114216121 GT ./. chr1 114223818 . A . . LowGQX END=114223961 GT ./. chr1 114224809 . T . . LowGQX END=114224909 GT ./. chr1 114225518 . G . . LowGQX END=114226637 GT ./. chr1 114234813 . A . . LowGQX END=114234913 GT ./. chr1 114240288 . T . . LowGQX END=114240388 GT ./. chr1 114240882 . A . . LowGQX END=114241052 GT ./. chr1 114242264 . C . . LowGQX END=114242424 GT ./. chr1 114243384 . C . . LowGQX END=114243604 GT ./. chr1 114246678 . C . . LowGQX END=114246792 GT ./. chr1 114247286 . A . . LowGQX END=114247422 GT ./. chr1 114248455 . T . . LowGQX END=114248787 GT ./. chr1 114249214 . A . . LowGQX END=114249347 GT ./. chr1 114252874 . A . . LowGQX END=114253100 GT ./. chr1 114254363 . T . . LowGQX END=114254463 GT ./. chr1 114254560 . A . . LowGQX END=114254738 GT ./. chr1 114255869 . A . . LowGQX END=114256063 GT ./. chr1 114267379 . A . . LowGQX END=114267518 GT ./. chr1 114269008 . A . . LowGQX END=114269199 GT ./. chr1 114280730 . A . . LowGQX END=114280893 GT ./. chr1 114281337 . A . . LowGQX END=114281437 GT ./. chr1 114300300 . G . . LowGQX END=114300400 GT ./. chr1 114301254 . A . . LowGQX END=114301354 GT ./. chr1 114308600 . T . . LowGQX END=114309078 GT ./. chr1 114309719 . A . . LowGQX END=114309832 GT ./. chr1 114310842 . A . . LowGQX END=114311014 GT ./. chr1 114319830 . A . . LowGQX END=114319977 GT ./. chr1 114320291 . A . . LowGQX END=114320433 GT ./. chr1 114339983 . A . . LowGQX END=114340661 GT ./. chr1 114354330 . A . . LowGQX END=114355037 GT ./. chr1 114357450 . A . . LowGQX END=114357610 GT ./. chr1 114362169 . T . . LowGQX END=114362279 GT ./. chr1 114367672 . T . . LowGQX END=114367830 GT ./. chr1 114372212 . A . . LowGQX END=114372332 GT ./. chr1 114372502 . C . . LowGQX END=114372662 GT ./. chr1 114375628 . A . . LowGQX END=114375786 GT ./. chr1 114376929 . A . . LowGQX END=114377064 GT ./. chr1 114377470 . T . . LowGQX END=114377624 GT ./. chr1 114380210 . A . . LowGQX END=114381032 GT ./. chr1 114381155 . A . . LowGQX END=114381255 GT ./. chr1 114391090 . A . . LowGQX END=114391256 GT ./. chr1 114394638 . A . . LowGQX END=114394738 GT ./. chr1 114397077 . G . . LowGQX END=114397177 GT ./. chr1 114397527 . A . . LowGQX END=114397674 GT ./. chr1 114398984 . C . . LowGQX END=114399084 GT ./. chr1 114399156 . G . . LowGQX END=114399256 GT ./. chr1 114400330 . A . . LowGQX END=114400430 GT ./. chr1 114401098 . A . . LowGQX END=114401198 GT ./. chr1 114401613 . T . . LowGQX END=114401713 GT ./. chr1 114401972 . A . . LowGQX END=114402085 GT ./. chr1 114406809 . T . . LowGQX END=114407005 GT ./. chr1 114414153 . A . . LowGQX END=114414253 GT ./. chr1 114423692 . C . . LowGQX END=114423792 GT ./. chr1 114424393 . A . . LowGQX END=114424622 GT ./. chr1 114429157 . A . . LowGQX END=114429283 GT ./. chr1 114429869 . A . . LowGQX END=114430000 GT ./. chr1 114437636 . A . . LowGQX END=114438166 GT ./. chr1 114438301 . A . . LowGQX END=114438712 GT ./. chr1 114438819 . A . . LowGQX END=114439139 GT ./. chr1 114440411 . G . . LowGQX END=114440617 GT ./. chr1 114441289 . A . . LowGQX END=114441475 GT ./. chr1 114442439 . T . . LowGQX END=114443074 GT ./. chr1 114443807 . T . . LowGQX END=114444057 GT ./. chr1 114444326 . A . . LowGQX END=114444559 GT ./. chr1 114445209 . T . . LowGQX END=114445536 GT ./. chr1 114447176 . G . . LowGQX END=114447391 GT ./. chr1 114448197 . A . . LowGQX END=114448400 GT ./. chr1 114449616 . A . . LowGQX END=114449786 GT ./. chr1 114450629 . A . . LowGQX END=114450816 GT ./. chr1 114453751 . A . . LowGQX END=114454816 GT ./. chr1 114471943 . G . . LowGQX END=114472155 GT ./. chr1 114483003 . G . . LowGQX END=114484084 GT ./. chr1 114495386 . A . . LowGQX END=114495514 GT ./. chr1 114497253 . T . . LowGQX END=114497395 GT ./. chr1 114498179 . T . . LowGQX END=114498279 GT ./. chr1 114499247 . A . . LowGQX END=114499447 GT ./. chr1 114499744 . A . . LowGQX END=114499911 GT ./. chr1 114500686 . A . . LowGQX END=114500916 GT ./. chr1 114504937 . A . . LowGQX END=114505063 GT ./. chr1 114506007 . A . . LowGQX END=114506146 GT ./. chr1 114508750 . A . . LowGQX END=114508897 GT ./. chr1 114510386 . A . . LowGQX END=114510626 GT ./. chr1 114511062 . A . . LowGQX END=114511273 GT ./. chr1 114512576 . A . . LowGQX END=114512822 GT ./. chr1 114514374 . A . . LowGQX END=114514724 GT ./. chr1 114515644 . A . . LowGQX END=114516137 GT ./. chr1 114522137 . C . . LowGQX END=114522255 GT ./. chr1 114522672 . C . . LowGQX END=114522772 GT ./. chr1 114522952 . A . . LowGQX END=114523242 GT ./. chr1 114523569 . A . . LowGQX END=114524396 GT ./. chr1 114634619 . T . . LowGQX END=114634719 GT ./. chr1 114636367 . A . . LowGQX END=114636467 GT ./. chr1 114640347 . A . . LowGQX END=114640502 GT ./. chr1 114641714 . A . . LowGQX END=114641890 GT ./. chr1 114646221 . A . . LowGQX END=114646346 GT ./. chr1 114680115 . A . . LowGQX END=114680678 GT ./. chr1 114682235 . A . . LowGQX END=114682586 GT ./. chr1 114696231 . C . . LowGQX END=114696416 GT ./. chr1 114940268 . T . . LowGQX END=114940485 GT ./. chr1 114940538 . G . . LowGQX END=114940638 GT ./. chr1 114942047 . A . . LowGQX END=114942234 GT ./. chr1 114943999 . T . . LowGQX END=114944099 GT ./. chr1 114945380 . A . . LowGQX END=114945508 GT ./. chr1 114948022 . T . . LowGQX END=114948384 GT ./. chr1 114949561 . A . . LowGQX END=114949725 GT ./. chr1 114951227 . A . . LowGQX END=114951381 GT ./. chr1 114952754 . G . . LowGQX END=114952941 GT ./. chr1 114962988 . A . . LowGQX END=114963088 GT ./. chr1 114964056 . A . . LowGQX END=114964261 GT ./. chr1 114967211 . A . . LowGQX END=114967380 GT ./. chr1 114968069 . A . . LowGQX END=114968348 GT ./. chr1 114969797 . A . . LowGQX END=114969919 GT ./. chr1 114970368 . A . . LowGQX END=114970519 GT ./. chr1 114973358 . C . . LowGQX END=114973537 GT ./. chr1 114976237 . A . . LowGQX END=114976358 GT ./. chr1 115005724 . A . . LowGQX END=115005861 GT ./. chr1 115006032 . A . . LowGQX END=115006212 GT ./. chr1 115006890 . A . . LowGQX END=115007013 GT ./. chr1 115053170 . A . . LowGQX END=115053706 GT ./. chr1 115110749 . T . . LowGQX END=115110880 GT ./. chr1 115112604 . G . . LowGQX END=115112704 GT ./. chr1 115113297 . C . . LowGQX END=115113449 GT ./. chr1 115118209 . A . . LowGQX END=115118399 GT ./. chr1 115119295 . T . . LowGQX END=115119395 GT ./. chr1 115123917 . T . . LowGQX END=115124017 GT ./. chr1 115124117 . C . . LowGQX END=115124217 GT ./. chr1 115128187 . T . . LowGQX END=115128287 GT ./. chr1 115130000 . C . . LowGQX END=115130100 GT ./. chr1 115130335 . A . . LowGQX END=115130576 GT ./. chr1 115137092 . A . . LowGQX END=115137202 GT ./. chr1 115138424 . C . . LowGQX END=115138524 GT ./. chr1 115141893 . A . . LowGQX END=115142075 GT ./. chr1 115142823 . A . . LowGQX END=115142976 GT ./. chr1 115143439 . A . . LowGQX END=115143584 GT ./. chr1 115144118 . T . . LowGQX END=115144218 GT ./. chr1 115144731 . A . . LowGQX END=115144831 GT ./. chr1 115147491 . A . . LowGQX END=115147655 GT ./. chr1 115151305 . A . . LowGQX END=115151505 GT ./. chr1 115153667 . C . . LowGQX END=115153767 GT ./. chr1 115160955 . C . . LowGQX END=115161106 GT ./. chr1 115164504 . T . . LowGQX END=115164687 GT ./. chr1 115165606 . A . . LowGQX END=115165723 GT ./. chr1 115166086 . T . . LowGQX END=115166267 GT ./. chr1 115167798 . A . . LowGQX END=115168608 GT ./. chr1 115215684 . C . . LowGQX END=115215945 GT ./. chr1 115216209 . A . . LowGQX END=115216422 GT ./. chr1 115216479 . G . . LowGQX END=115216745 GT ./. chr1 115217322 . A . . LowGQX END=115217545 GT ./. chr1 115218100 . G . . LowGQX END=115218366 GT ./. chr1 115218447 . G . . LowGQX END=115218676 GT ./. chr1 115219921 . A . . LowGQX END=115220187 GT ./. chr1 115220480 . T . . LowGQX END=115220714 GT ./. chr1 115220903 . A . . LowGQX END=115221200 GT ./. chr1 115222149 . A . . LowGQX END=115222381 GT ./. chr1 115222829 . T . . LowGQX END=115223151 GT ./. chr1 115225712 . A . . LowGQX END=115225812 GT ./. chr1 115226769 . T . . LowGQX END=115227037 GT ./. chr1 115229315 . A . . LowGQX END=115229635 GT ./. chr1 115231131 . A . . LowGQX END=115231414 GT ./. chr1 115231491 . C . . LowGQX END=115231591 GT ./. chr1 115236003 . A . . LowGQX END=115236120 GT ./. chr1 115238020 . A . . LowGQX END=115238192 GT ./. chr1 115251105 . T . . LowGQX END=115251327 GT ./. chr1 115252139 . G . . LowGQX END=115252401 GT ./. chr1 115256370 . A . . LowGQX END=115256651 GT ./. chr1 115258620 . T . . LowGQX END=115258833 GT ./. chr1 115260764 . A . . LowGQX END=115260864 GT ./. chr1 115261232 . A . . LowGQX END=115261369 GT ./. chr1 115262198 . A . . LowGQX END=115262366 GT ./. chr1 115263158 . A . . LowGQX END=115263341 GT ./. chr1 115266452 . C . . LowGQX END=115266626 GT ./. chr1 115267840 . A . . LowGQX END=115267957 GT ./. chr1 115268830 . A . . LowGQX END=115269010 GT ./. chr1 115269602 . G . . LowGQX END=115269714 GT ./. chr1 115272877 . A . . LowGQX END=115273046 GT ./. chr1 115273127 . A . . LowGQX END=115273272 GT ./. chr1 115275223 . A . . LowGQX END=115275440 GT ./. chr1 115276351 . A . . LowGQX END=115276481 GT ./. chr1 115276608 . A . . LowGQX END=115276741 GT ./. chr1 115277001 . G . . LowGQX END=115277154 GT ./. chr1 115279377 . A . . LowGQX END=115279479 GT ./. chr1 115280089 . T . . LowGQX END=115280189 GT ./. chr1 115280582 . A . . LowGQX END=115280696 GT ./. chr1 115282311 . A . . LowGQX END=115282514 GT ./. chr1 115284147 . C . . LowGQX END=115284286 GT ./. chr1 115316890 . A . . LowGQX END=115316996 GT ./. chr1 115318965 . A . . LowGQX END=115319125 GT ./. chr1 115321761 . A . . LowGQX END=115321908 GT ./. chr1 115322729 . A . . LowGQX END=115322839 GT ./. chr1 115323036 . T . . LowGQX END=115323231 GT ./. chr1 115398084 . A . . LowGQX END=115398196 GT ./. chr1 115399187 . T . . LowGQX END=115399287 GT ./. chr1 115399825 . T . . LowGQX END=115399925 GT ./. chr1 115400042 . T . . LowGQX END=115400142 GT ./. chr1 115401166 . A . . LowGQX END=115401335 GT ./. chr1 115402292 . C . . LowGQX END=115402448 GT ./. chr1 115403285 . T . . LowGQX END=115403444 GT ./. chr1 115417055 . A . . LowGQX END=115417207 GT ./. chr1 115418675 . A . . LowGQX END=115418775 GT ./. chr1 115419286 . A . . LowGQX END=115419445 GT ./. chr1 115420713 . A . . LowGQX END=115420873 GT ./. chr1 115428094 . A . . LowGQX END=115428254 GT ./. chr1 115428744 . A . . LowGQX END=115428933 GT ./. chr1 115430231 . T . . LowGQX END=115430331 GT ./. chr1 115438050 . T . . LowGQX END=115438150 GT ./. chr1 115452946 . C . . LowGQX END=115453125 GT ./. chr1 115454048 . A . . LowGQX END=115454206 GT ./. chr1 115455652 . A . . LowGQX END=115455822 GT ./. chr1 115456524 . G . . LowGQX END=115456682 GT ./. chr1 115466008 . T . . LowGQX END=115466161 GT ./. chr1 115468881 . T . . LowGQX END=115468981 GT ./. chr1 115469104 . T . . LowGQX END=115469204 GT ./. chr1 115486908 . C . . LowGQX END=115487128 GT ./. chr1 115487441 . T . . LowGQX END=115487606 GT ./. chr1 115488847 . G . . LowGQX END=115489058 GT ./. chr1 115489795 . A . . LowGQX END=115489955 GT ./. chr1 115520106 . A . . LowGQX END=115520351 GT ./. chr1 115523955 . A . . LowGQX END=115524155 GT ./. chr1 115527344 . A . . LowGQX END=115527492 GT ./. chr1 115537314 . T . . LowGQX END=115537414 GT ./. chr1 115537501 . A . . LowGQX END=115537643 GT ./. chr1 115575933 . G . . LowGQX END=115576197 GT ./. chr1 115576543 . T . . LowGQX END=115576900 GT ./. chr1 115593039 . A . . LowGQX END=115593194 GT ./. chr1 115595938 . T . . LowGQX END=115596092 GT ./. chr1 115600144 . T . . LowGQX END=115600244 GT ./. chr1 115601452 . C . . LowGQX END=115601605 GT ./. chr1 115603073 . A . . LowGQX END=115603173 GT ./. chr1 115604754 . A . . LowGQX END=115604856 GT ./. chr1 115615524 . A . . LowGQX END=115615631 GT ./. chr1 115631970 . G . . LowGQX END=115632070 GT ./. chr1 115828640 . A . . LowGQX END=115829468 GT ./. chr1 116193984 . C . . LowGQX END=116194157 GT ./. chr1 116202211 . A . . LowGQX END=116202446 GT ./. chr1 116206231 . C . . LowGQX END=116206941 GT ./. chr1 116224934 . C . . LowGQX END=116225170 GT ./. chr1 116226514 . T . . LowGQX END=116226749 GT ./. chr1 116227863 . C . . LowGQX END=116228200 GT ./. chr1 116233689 . C . . LowGQX END=116234052 GT ./. chr1 116243801 . T . . LowGQX END=116244099 GT ./. chr1 116245491 . A . . LowGQX END=116245668 GT ./. chr1 116247762 . C . . LowGQX END=116247965 GT ./. chr1 116260410 . A . . LowGQX END=116260567 GT ./. chr1 116268062 . T . . LowGQX END=116268226 GT ./. chr1 116269562 . C . . LowGQX END=116269795 GT ./. chr1 116275471 . A . . LowGQX END=116275647 GT ./. chr1 116280794 . G . . LowGQX END=116281008 GT ./. chr1 116283298 . A . . LowGQX END=116283501 GT ./. chr1 116287398 . A . . LowGQX END=116287585 GT ./. chr1 116310878 . C . . LowGQX END=116311214 GT ./. chr1 116380514 . C . . LowGQX END=116381064 GT ./. chr1 116519182 . C . . LowGQX END=116519398 GT ./. chr1 116534651 . G . . LowGQX END=116534865 GT ./. chr1 116562202 . G . . LowGQX END=116562336 GT ./. chr1 116563341 . G . . LowGQX END=116563507 GT ./. chr1 116569513 . G . . LowGQX END=116569644 GT ./. chr1 116569904 . A . . LowGQX END=116570004 GT ./. chr1 116573986 . G . . LowGQX END=116574203 GT ./. chr1 116577807 . G . . LowGQX END=116577949 GT ./. chr1 116579917 . T . . LowGQX END=116580017 GT ./. chr1 116605382 . G . . LowGQX END=116605504 GT ./. chr1 116607043 . C . . LowGQX END=116607143 GT ./. chr1 116609140 . G . . LowGQX END=116609330 GT ./. chr1 116609635 . T . . LowGQX END=116609735 GT ./. chr1 116655211 . T . . LowGQX END=116655311 GT ./. chr1 116663551 . A . . LowGQX END=116663696 GT ./. chr1 116666685 . A . . LowGQX END=116666981 GT ./. chr1 116670085 . A . . LowGQX END=116670268 GT ./. chr1 116670764 . A . . LowGQX END=116670963 GT ./. chr1 116675751 . A . . LowGQX END=116675989 GT ./. chr1 116916030 . A . . LowGQX END=116916190 GT ./. chr1 116916808 . T . . LowGQX END=116916908 GT ./. chr1 116925899 . C . . LowGQX END=116925999 GT ./. chr1 116926633 . C . . LowGQX END=116926749 GT ./. chr1 116927393 . G . . LowGQX END=116927600 GT ./. chr1 116929908 . A . . LowGQX END=116930116 GT ./. chr1 116930751 . A . . LowGQX END=116930911 GT ./. chr1 116931258 . A . . LowGQX END=116931397 GT ./. chr1 116931522 . A . . LowGQX END=116931644 GT ./. chr1 116932059 . A . . LowGQX END=116932332 GT ./. chr1 116932833 . A . . LowGQX END=116933036 GT ./. chr1 116933402 . A . . LowGQX END=116933516 GT ./. chr1 116935474 . A . . LowGQX END=116935613 GT ./. chr1 116936151 . A . . LowGQX END=116936348 GT ./. chr1 116937730 . A . . LowGQX END=116937910 GT ./. chr1 116939187 . G . . LowGQX END=116939359 GT ./. chr1 116940508 . A . . LowGQX END=116940663 GT ./. chr1 116941241 . A . . LowGQX END=116941414 GT ./. chr1 116941550 . A . . LowGQX END=116941709 GT ./. chr1 116942040 . A . . LowGQX END=116942168 GT ./. chr1 116943481 . A . . LowGQX END=116943631 GT ./. chr1 116943750 . A . . LowGQX END=116943885 GT ./. chr1 116944174 . A . . LowGQX END=116944280 GT ./. chr1 116946502 . C . . LowGQX END=116946602 GT ./. chr1 116946943 . T . . LowGQX END=116947103 GT ./. chr1 116948224 . C . . LowGQX END=116948513 GT ./. chr1 116952718 . T . . LowGQX END=116952818 GT ./. chr1 117057390 . T . . LowGQX END=117057490 GT ./. chr1 117061820 . T . . LowGQX END=117061973 GT ./. chr1 117064450 . T . . LowGQX END=117064609 GT ./. chr1 117078585 . A . . LowGQX END=117078853 GT ./. chr1 117086931 . A . . LowGQX END=117087229 GT ./. chr1 117113450 . G . . LowGQX END=117113610 GT ./. chr1 117119932 . G . . LowGQX END=117120187 GT ./. chr1 117122012 . A . . LowGQX END=117122502 GT ./. chr1 117127163 . C . . LowGQX END=117127677 GT ./. chr1 117131314 . A . . LowGQX END=117131729 GT ./. chr1 117142561 . A . . LowGQX END=117142970 GT ./. chr1 117146244 . A . . LowGQX END=117146650 GT ./. chr1 117149042 . A . . LowGQX END=117149194 GT ./. chr1 117150562 . A . . LowGQX END=117150956 GT ./. chr1 117156385 . A . . LowGQX END=117156800 GT ./. chr1 117158700 . A . . LowGQX END=117159082 GT ./. chr1 117208818 . G . . LowGQX END=117208978 GT ./. chr1 117214301 . A . . LowGQX END=117214461 GT ./. chr1 117236736 . G . . LowGQX END=117236836 GT ./. chr1 117237379 . A . . LowGQX END=117237479 GT ./. chr1 117248549 . T . . LowGQX END=117248649 GT ./. chr1 117249067 . C . . LowGQX END=117249167 GT ./. chr1 117297096 . G . . LowGQX END=117297196 GT ./. chr1 117297251 . A . . LowGQX END=117297594 GT ./. chr1 117303022 . A . . LowGQX END=117303257 GT ./. chr1 117307104 . A . . LowGQX END=117307306 GT ./. chr1 117311084 . A . . LowGQX END=117311408 GT ./. chr1 117452667 . C . . LowGQX END=117452901 GT ./. chr1 117484335 . A . . LowGQX END=117484708 GT ./. chr1 117487299 . A . . LowGQX END=117487717 GT ./. chr1 117491812 . A . . LowGQX END=117492197 GT ./. chr1 117503863 . A . . LowGQX END=117504293 GT ./. chr1 117509531 . A . . LowGQX END=117509955 GT ./. chr1 117516836 . A . . LowGQX END=117516948 GT ./. chr1 117527300 . A . . LowGQX END=117527610 GT ./. chr1 117529421 . A . . LowGQX END=117529592 GT ./. chr1 117544412 . G . . LowGQX END=117544512 GT ./. chr1 117552470 . A . . LowGQX END=117552855 GT ./. chr1 117554170 . A . . LowGQX END=117554591 GT ./. chr1 117556026 . A . . LowGQX END=117556417 GT ./. chr1 117559710 . A . . LowGQX END=117560098 GT ./. chr1 117560776 . A . . LowGQX END=117561185 GT ./. chr1 117564193 . A . . LowGQX END=117564608 GT ./. chr1 117568129 . A . . LowGQX END=117568529 GT ./. chr1 117576480 . A . . LowGQX END=117576726 GT ./. chr1 117602877 . A . . LowGQX END=117603033 GT ./. chr1 117603075 . A . . LowGQX END=117603182 GT ./. chr1 117605003 . C . . LowGQX END=117605103 GT ./. chr1 117616267 . T . . LowGQX END=117616367 GT ./. chr1 117617490 . A . . LowGQX END=117618484 GT ./. chr1 117618800 . A . . LowGQX END=117618919 GT ./. chr1 117619261 . A . . LowGQX END=117619448 GT ./. chr1 117620536 . A . . LowGQX END=117620668 GT ./. chr1 117622181 . C . . LowGQX END=117622281 GT ./. chr1 117624448 . A . . LowGQX END=117624698 GT ./. chr1 117626638 . A . . LowGQX END=117626793 GT ./. chr1 117629037 . A . . LowGQX END=117629147 GT ./. chr1 117631421 . A . . LowGQX END=117631607 GT ./. chr1 117632675 . A . . LowGQX END=117632833 GT ./. chr1 117633150 . C . . LowGQX END=117633250 GT ./. chr1 117633942 . T . . LowGQX END=117634042 GT ./. chr1 117634437 . A . . LowGQX END=117634575 GT ./. chr1 117635351 . A . . LowGQX END=117635526 GT ./. chr1 117637194 . G . . LowGQX END=117637358 GT ./. chr1 117637911 . T . . LowGQX END=117638011 GT ./. chr1 117638769 . A . . LowGQX END=117638924 GT ./. chr1 117639965 . T . . LowGQX END=117640065 GT ./. chr1 117641443 . G . . LowGQX END=117641543 GT ./. chr1 117644000 . A . . LowGQX END=117644149 GT ./. chr1 117654925 . C . . LowGQX END=117655078 GT ./. chr1 117655979 . A . . LowGQX END=117656110 GT ./. chr1 117658195 . A . . LowGQX END=117658314 GT ./. chr1 117659236 . A . . LowGQX END=117659370 GT ./. chr1 117660654 . A . . LowGQX END=117661392 GT ./. chr1 117663334 . A . . LowGQX END=117663826 GT ./. chr1 117664404 . C . . LowGQX END=117664504 GT ./. chr1 117690278 . C . . LowGQX END=117690407 GT ./. chr1 117695711 . A . . LowGQX END=117695994 GT ./. chr1 117699194 . A . . LowGQX END=117699668 GT ./. chr1 117712712 . T . . LowGQX END=117712812 GT ./. chr1 117712874 . T . . LowGQX END=117712974 GT ./. chr1 117714987 . T . . LowGQX END=117715087 GT ./. chr1 117715719 . A . . LowGQX END=117715879 GT ./. chr1 117753412 . C . . LowGQX END=117753512 GT ./. chr1 117910804 . C . . LowGQX END=117911110 GT ./. chr1 117944806 . A . . LowGQX END=117945066 GT ./. chr1 117948110 . G . . LowGQX END=117948329 GT ./. chr1 117957333 . A . . LowGQX END=117957456 GT ./. chr1 117963182 . T . . LowGQX END=117963282 GT ./. chr1 117984851 . A . . LowGQX END=117984951 GT ./. chr1 118003109 . A . . LowGQX END=118003237 GT ./. chr1 118008953 . C . . LowGQX END=118009053 GT ./. chr1 118035767 . A . . LowGQX END=118035887 GT ./. chr1 118039353 . C . . LowGQX END=118039643 GT ./. chr1 118042002 . A . . LowGQX END=118042179 GT ./. chr1 118045425 . T . . LowGQX END=118045595 GT ./. chr1 118057442 . T . . LowGQX END=118057542 GT ./. chr1 118065445 . A . . LowGQX END=118065582 GT ./. chr1 118065825 . G . . LowGQX END=118065925 GT ./. chr1 118067696 . T . . LowGQX END=118067796 GT ./. chr1 118165489 . A . . LowGQX END=118166669 GT ./. chr1 118413165 . A . . LowGQX END=118413319 GT ./. chr1 118420585 . G . . LowGQX END=118420777 GT ./. chr1 118424423 . A . . LowGQX END=118424523 GT ./. chr1 118426108 . A . . LowGQX END=118426252 GT ./. chr1 118429188 . T . . LowGQX END=118429288 GT ./. chr1 118430257 . A . . LowGQX END=118430409 GT ./. chr1 118439453 . A . . LowGQX END=118439614 GT ./. chr1 118441677 . A . . LowGQX END=118441841 GT ./. chr1 118449117 . T . . LowGQX END=118449217 GT ./. chr1 118454611 . C . . LowGQX END=118454711 GT ./. chr1 118455150 . A . . LowGQX END=118455308 GT ./. chr1 118461217 . A . . LowGQX END=118461397 GT ./. chr1 118462803 . A . . LowGQX END=118462983 GT ./. chr1 118475941 . A . . LowGQX END=118476116 GT ./. chr1 118476229 . A . . LowGQX END=118476329 GT ./. chr1 118477094 . A . . LowGQX END=118477308 GT ./. chr1 118479390 . A . . LowGQX END=118479513 GT ./. chr1 118481093 . C . . LowGQX END=118481193 GT ./. chr1 118482098 . A . . LowGQX END=118482198 GT ./. chr1 118483448 . A . . LowGQX END=118483566 GT ./. chr1 118483745 . A . . LowGQX END=118483851 GT ./. chr1 118484321 . G . . LowGQX END=118484473 GT ./. chr1 118485008 . A . . LowGQX END=118485170 GT ./. chr1 118486017 . A . . LowGQX END=118486252 GT ./. chr1 118488706 . T . . LowGQX END=118488806 GT ./. chr1 118491026 . A . . LowGQX END=118491132 GT ./. chr1 118492367 . T . . LowGQX END=118492467 GT ./. chr1 118492616 . A . . LowGQX END=118492756 GT ./. chr1 118493385 . T . . LowGQX END=118493536 GT ./. chr1 118494597 . A . . LowGQX END=118494702 GT ./. chr1 118494918 . A . . LowGQX END=118495034 GT ./. chr1 118495149 . A . . LowGQX END=118495288 GT ./. chr1 118495545 . T . . LowGQX END=118495645 GT ./. chr1 118496027 . G . . LowGQX END=118496182 GT ./. chr1 118496627 . T . . LowGQX END=118496727 GT ./. chr1 118497177 . G . . LowGQX END=118497277 GT ./. chr1 118497910 . A . . LowGQX END=118498010 GT ./. chr1 118499689 . A . . LowGQX END=118499822 GT ./. chr1 118501530 . C . . LowGQX END=118501630 GT ./. chr1 118501913 . A . . LowGQX END=118502073 GT ./. chr1 118506420 . A . . LowGQX END=118506564 GT ./. chr1 118509221 . T . . LowGQX END=118509379 GT ./. chr1 118512607 . C . . LowGQX END=118512760 GT ./. chr1 118514484 . A . . LowGQX END=118514673 GT ./. chr1 118516046 . A . . LowGQX END=118516187 GT ./. chr1 118523891 . A . . LowGQX END=118524071 GT ./. chr1 118526432 . A . . LowGQX END=118526539 GT ./. chr1 118527304 . A . . LowGQX END=118527464 GT ./. chr1 118530431 . T . . LowGQX END=118530531 GT ./. chr1 118530726 . A . . LowGQX END=118530830 GT ./. chr1 118533402 . A . . LowGQX END=118533557 GT ./. chr1 118534036 . A . . LowGQX END=118534154 GT ./. chr1 118535087 . A . . LowGQX END=118535274 GT ./. chr1 118537027 . A . . LowGQX END=118537156 GT ./. chr1 118538991 . A . . LowGQX END=118539126 GT ./. chr1 118539219 . A . . LowGQX END=118539369 GT ./. chr1 118548035 . A . . LowGQX END=118548228 GT ./. chr1 118550665 . A . . LowGQX END=118550824 GT ./. chr1 118554849 . A . . LowGQX END=118554998 GT ./. chr1 118558586 . A . . LowGQX END=118558808 GT ./. chr1 118565925 . A . . LowGQX END=118566089 GT ./. chr1 118567839 . T . . LowGQX END=118568042 GT ./. chr1 118570895 . A . . LowGQX END=118571020 GT ./. chr1 118574313 . A . . LowGQX END=118574493 GT ./. chr1 118579391 . A . . LowGQX END=118579509 GT ./. chr1 118581913 . A . . LowGQX END=118582103 GT ./. chr1 118583351 . A . . LowGQX END=118583511 GT ./. chr1 118584424 . A . . LowGQX END=118584668 GT ./. chr1 118596621 . T . . LowGQX END=118596721 GT ./. chr1 118598334 . A . . LowGQX END=118598540 GT ./. chr1 118609366 . A . . LowGQX END=118609525 GT ./. chr1 118616425 . G . . LowGQX END=118616593 GT ./. chr1 118617083 . T . . LowGQX END=118617243 GT ./. chr1 118623722 . A . . LowGQX END=118623945 GT ./. chr1 118624036 . A . . LowGQX END=118624268 GT ./. chr1 118628543 . A . . LowGQX END=118628723 GT ./. chr1 118629292 . A . . LowGQX END=118629410 GT ./. chr1 118629422 . A . . LowGQX END=118629634 GT ./. chr1 118634227 . A . . LowGQX END=118634344 GT ./. chr1 118634540 . A . . LowGQX END=118634640 GT ./. chr1 118635777 . A . . LowGQX END=118635943 GT ./. chr1 118640291 . A . . LowGQX END=118640477 GT ./. chr1 118642217 . C . . LowGQX END=118642426 GT ./. chr1 118644361 . A . . LowGQX END=118644552 GT ./. chr1 118657891 . A . . LowGQX END=118658067 GT ./. chr1 118693160 . A . . LowGQX END=118693260 GT ./. chr1 118693850 . A . . LowGQX END=118693995 GT ./. chr1 118727688 . G . . LowGQX END=118727788 GT ./. chr1 119427304 . G . . LowGQX END=119428191 GT ./. chr1 119433489 . C . . LowGQX END=119433589 GT ./. chr1 119441600 . A . . LowGQX END=119441801 GT ./. chr1 119443967 . C . . LowGQX END=119444067 GT ./. chr1 119456687 . G . . LowGQX END=119456854 GT ./. chr1 119466008 . G . . LowGQX END=119466278 GT ./. chr1 119467218 . A . . LowGQX END=119467492 GT ./. chr1 119469082 . T . . LowGQX END=119469286 GT ./. chr1 119474191 . C . . LowGQX END=119474456 GT ./. chr1 119530213 . C . . LowGQX END=119530419 GT ./. chr1 119575532 . T . . LowGQX END=119576014 GT ./. chr1 119576714 . T . . LowGQX END=119576839 GT ./. chr1 119584880 . T . . LowGQX END=119584980 GT ./. chr1 119588196 . G . . LowGQX END=119588296 GT ./. chr1 119618971 . A . . LowGQX END=119619233 GT ./. chr1 119683173 . G . . LowGQX END=119683273 GT ./. chr1 119923281 . T . . LowGQX END=119923381 GT ./. chr1 119923700 . G . . LowGQX END=119923842 GT ./. chr1 119925536 . A . . LowGQX END=119925692 GT ./. chr1 119927397 . A . . LowGQX END=119927679 GT ./. chr1 119929243 . A . . LowGQX END=119929457 GT ./. chr1 119934731 . A . . LowGQX END=119934894 GT ./. chr1 119935226 . C . . LowGQX END=119935326 GT ./. chr1 119936386 . T . . LowGQX END=119936486 GT ./. chr1 119957992 . A . . LowGQX END=119958236 GT ./. chr1 119961990 . T . . LowGQX END=119962257 GT ./. chr1 119964381 . C . . LowGQX END=119965295 GT ./. chr1 119985501 . A . . LowGQX END=119985863 GT ./. chr1 120050093 . G . . LowGQX END=120050247 GT ./. chr1 120054124 . A . . LowGQX END=120054293 GT ./. chr1 120056455 . A . . LowGQX END=120057271 GT ./. chr1 120165327 . C . . LowGQX END=120166740 GT ./. chr1 120168497 . C . . LowGQX END=120168724 GT ./. chr1 120254595 . T . . LowGQX END=120254835 GT ./. chr1 120263725 . G . . LowGQX END=120263996 GT ./. chr1 120265948 . G . . LowGQX END=120266116 GT ./. chr1 120267418 . G . . LowGQX END=120267616 GT ./. chr1 120269423 . G . . LowGQX END=120269427;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 120269428 . G . . LowGQX . GT ./. chr1 120269429 . G . . LowGQX END=120269433;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 120269434 . A . . LowGQX END=120269436 GT ./. chr1 120269437 . C . . LowGQX END=120269439;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 120269440 . A . 33 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 120269441 . A . . LowGQX . GT:DP:GQX:MQ 0/0:2:3:60 chr1 120269442 . T . . LowGQX . GT ./. chr1 120269443 . G . . LowGQX END=120269444;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 120269445 . A . . LowGQX . GT ./. chr1 120269446 . C . . LowGQX END=120269448;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 120269449 . T . . LowGQX . GT ./. chr1 120269450 . C . . LowGQX END=120269451;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 120269452 . G . . LowGQX END=120269453 GT ./. chr1 120269454 . A . . LowGQX . GT:DP:GQX:MQ 0/0:2:3:60 chr1 120269455 . C . . LowGQX . GT ./. chr1 120269456 . C . . LowGQX . GT:DP:GQX:MQ 0/0:2:3:60 chr1 120269457 . T . . LowGQX END=120269777 GT ./. chr1 120277206 . A . . LowGQX END=120277536 GT ./. chr1 120277867 . C . . LowGQX END=120278118 GT ./. chr1 120279686 . G . . LowGQX END=120279941 GT ./. chr1 120282958 . G . . LowGQX END=120283193 GT ./. chr1 120284339 . C . . LowGQX END=120284572 GT ./. chr1 120285379 . G . . LowGQX END=120285719 GT ./. chr1 120286458 . C . . LowGQX END=120286715 GT ./. chr1 120293374 . A . . LowGQX END=120293583 GT ./. chr1 120295121 . C . . LowGQX END=120295349 GT ./. chr1 120295852 . T . . LowGQX END=120296051 GT ./. chr1 120297999 . G . . LowGQX END=120298272 GT ./. chr1 120299845 . C . . LowGQX END=120300113 GT ./. chr1 120301690 . C . . LowGQX END=120301957 GT ./. chr1 120302436 . A . . LowGQX END=120302664 GT ./. chr1 120306744 . C . . LowGQX END=120307301 GT ./. chr1 120311313 . G . . LowGQX END=120311519 GT ./. chr1 120336737 . A . . LowGQX END=120336837 GT ./. chr1 120337225 . A . . LowGQX END=120337325 GT ./. chr1 120341118 . A . . LowGQX END=120341228 GT ./. chr1 120342346 . A . . LowGQX END=120342488 GT ./. chr1 120345450 . C . . LowGQX END=120345791 GT ./. chr1 120351310 . C . . LowGQX END=120351410 GT ./. chr1 120377386 . A . . LowGQX END=120377530 GT ./. chr1 120378618 . A . . LowGQX END=120378834 GT ./. chr1 120379835 . T . . LowGQX END=120379995 GT ./. chr1 120381805 . A . . LowGQX END=120382021 GT ./. chr1 120382808 . T . . LowGQX END=120382967 GT ./. chr1 120384007 . A . . LowGQX END=120384226 GT ./. chr1 120385054 . A . . LowGQX END=120385161 GT ./. chr1 120386922 . A . . LowGQX END=120387161 GT ./. chr1 120436585 . G . . LowGQX END=120438962 GT ./. chr1 120457878 . C . . LowGQX END=120459369 GT ./. chr1 120460237 . A . . LowGQX END=120460437 GT ./. chr1 120460978 . C . . LowGQX END=120461228 GT ./. chr1 120461884 . T . . LowGQX END=120462288 GT ./. chr1 120462801 . A . . LowGQX END=120463072 GT ./. chr1 120464285 . A . . LowGQX END=120464484 GT ./. chr1 120464808 . A . . LowGQX END=120465121 GT ./. chr1 120465208 . A . . LowGQX END=120465453 GT ./. chr1 120466209 . A . . LowGQX END=120466659 GT ./. chr1 120467877 . A . . LowGQX END=120468485 GT ./. chr1 120469071 . A . . LowGQX END=120469276 GT ./. chr1 120471548 . C . . LowGQX END=120471887 GT ./. chr1 120478031 . T . . LowGQX END=120478279 GT ./. chr1 120479854 . T . . LowGQX END=120480141 GT ./. chr1 120480429 . G . . LowGQX END=120480685 GT ./. chr1 120483127 . A . . LowGQX END=120483431 GT ./. chr1 120484098 . T . . LowGQX END=120484429 GT ./. chr1 120490986 . C . . LowGQX END=120491241 GT ./. chr1 120491579 . T . . LowGQX END=120491801 GT ./. chr1 120493116 . T . . LowGQX END=120493512 GT ./. chr1 120496115 . A . . LowGQX END=120496363 GT ./. chr1 120497612 . A . . LowGQX END=120497907 GT ./. chr1 120501964 . T . . LowGQX END=120502177 GT ./. chr1 120506146 . A . . LowGQX END=120506482 GT ./. chr1 120508025 . A . . LowGQX END=120508241 GT ./. chr1 120508948 . C . . LowGQX END=120509164 GT ./. chr1 120510005 . T . . LowGQX END=120510296 GT ./. chr1 120510649 . T . . LowGQX END=120510907 GT ./. chr1 120512083 . G . . LowGQX END=120512419 GT ./. chr1 120529532 . C . . LowGQX END=120529757 GT ./. chr1 120534045 . A . . LowGQX END=120534145 GT ./. chr1 120534194 . A . . LowGQX END=120534294 GT ./. chr1 120539279 . T . . LowGQX END=120539475 GT ./. chr1 120539569 . C . . LowGQX END=120540007 GT ./. chr1 120547901 . A . . LowGQX END=120548263 GT ./. chr1 120572478 . C . . LowGQX END=120572662 GT ./. chr1 120611396 . G . . LowGQX END=120612098 GT ./. chr1 120839811 . C . . LowGQX END=120839988 GT ./. chr1 120841912 . T . . LowGQX END=120842064 GT ./. chr1 120845993 . A . . LowGQX END=120846162 GT ./. chr1 120854490 . A . . LowGQX END=120854590 GT ./. chr1 120927135 . T . . LowGQX END=120927423 GT ./. chr1 120928502 . G . . LowGQX END=120928616 GT ./. chr1 120930022 . C . . LowGQX END=120930296 GT ./. chr1 120934371 . T . . LowGQX END=120934641 GT ./. chr1 120935409 . A . . LowGQX END=120935509 GT ./. chr1 120935830 . A . . LowGQX END=120935930 GT ./. chr1 121115764 . G . . LowGQX END=121116114 GT ./. chr1 121116687 . C . . LowGQX END=121116816 GT ./. chr1 121124494 . C . . LowGQX END=121124854 GT ./. chr1 121128367 . G . . LowGQX END=121128526 GT ./. chr1 121129424 . T . . LowGQX END=121129784 GT ./. chr1 121306453 . A . . LowGQX END=121306712 GT ./. chr1 121307472 . T . . LowGQX END=121307629 GT ./. chr1 121309923 . T . . LowGQX END=121310075 GT ./. chr1 121310533 . G . . LowGQX END=121310633 GT ./. chr1 143767352 . C . . LowGQX END=143767851 GT ./. chr1 143897544 . C . . LowGQX END=143897695 GT ./. chr1 143905970 . T . . LowGQX END=143906137 GT ./. chr1 143910006 . C . . LowGQX END=143910167 GT ./. chr1 143912112 . A . . LowGQX END=143912296 GT ./. chr1 143916166 . G . . LowGQX END=143916326 GT ./. chr1 144013901 . A . . LowGQX END=144014094 GT ./. chr1 144053506 . G . . LowGQX END=144053706 GT ./. chr1 144094301 . T . . LowGQX END=144094459 GT ./. chr1 144146736 . C . . LowGQX END=144147086 GT ./. chr1 144148738 . A . . LowGQX END=144148893 GT ./. chr1 144149655 . A . . LowGQX END=144150005 GT ./. chr1 144150908 . G . . LowGQX END=144151068 GT ./. chr1 144151447 . A . . LowGQX END=144151787 GT ./. chr1 144152929 . C . . LowGQX END=144153089 GT ./. chr1 144156971 . G . . LowGQX END=144157190 GT ./. chr1 144158094 . T . . LowGQX END=144158254 GT ./. chr1 144158870 . G . . LowGQX END=144159069 GT ./. chr1 144159679 . C . . LowGQX END=144159839 GT ./. chr1 144160344 . T . . LowGQX END=144160588 GT ./. chr1 144161213 . C . . LowGQX END=144161373 GT ./. chr1 144162001 . G . . LowGQX END=144162200 GT ./. chr1 144162837 . T . . LowGQX END=144162997 GT ./. chr1 144163556 . T . . LowGQX END=144163800 GT ./. chr1 144164435 . C . . LowGQX END=144164595 GT ./. chr1 144165100 . T . . LowGQX END=144165344 GT ./. chr1 144165969 . C . . LowGQX END=144166129 GT ./. chr1 144166761 . G . . LowGQX END=144166960 GT ./. chr1 144167597 . T . . LowGQX END=144167757 GT ./. chr1 144168360 . G . . LowGQX END=144168559 GT ./. chr1 144169168 . C . . LowGQX END=144169328 GT ./. chr1 144169838 . T . . LowGQX END=144170082 GT ./. chr1 144170707 . C . . LowGQX END=144170867 GT ./. chr1 144171501 . G . . LowGQX END=144171700 GT ./. chr1 144172337 . T . . LowGQX END=144172497 GT ./. chr1 144173029 . T . . LowGQX END=144173273 GT ./. chr1 144173898 . C . . LowGQX END=144174058 GT ./. chr1 144174692 . G . . LowGQX END=144174891 GT ./. chr1 144175528 . T . . LowGQX END=144175688 GT ./. chr1 144176220 . T . . LowGQX END=144176464 GT ./. chr1 144177089 . C . . LowGQX END=144177249 GT ./. chr1 144177875 . G . . LowGQX END=144178074 GT ./. chr1 144178711 . T . . LowGQX END=144178871 GT ./. chr1 144179403 . T . . LowGQX END=144179647 GT ./. chr1 144180272 . C . . LowGQX END=144180432 GT ./. chr1 144181064 . G . . LowGQX END=144181263 GT ./. chr1 144181900 . T . . LowGQX END=144182060 GT ./. chr1 144182625 . T . . LowGQX END=144182869 GT ./. chr1 144183504 . C . . LowGQX END=144183664 GT ./. chr1 144184181 . T . . LowGQX END=144184425 GT ./. chr1 144185050 . C . . LowGQX END=144185210 GT ./. chr1 144185828 . G . . LowGQX END=144186027 GT ./. chr1 144186664 . T . . LowGQX END=144186824 GT ./. chr1 144187389 . T . . LowGQX END=144187633 GT ./. chr1 144188268 . C . . LowGQX END=144188428 GT ./. chr1 144189012 . G . . LowGQX END=144189185 GT ./. chr1 144189810 . C . . LowGQX END=144189970 GT ./. chr1 144190582 . G . . LowGQX END=144190781 GT ./. chr1 144191418 . T . . LowGQX END=144191578 GT ./. chr1 144192135 . T . . LowGQX END=144192379 GT ./. chr1 144193014 . C . . LowGQX END=144193174 GT ./. chr1 144193689 . T . . LowGQX END=144193933 GT ./. chr1 144194558 . C . . LowGQX END=144194718 GT ./. chr1 144195344 . G . . LowGQX END=144195543 GT ./. chr1 144196180 . T . . LowGQX END=144196340 GT ./. chr1 144196905 . T . . LowGQX END=144197149 GT ./. chr1 144197784 . C . . LowGQX END=144197944 GT ./. chr1 144198449 . T . . LowGQX END=144198693 GT ./. chr1 144199318 . C . . LowGQX END=144199478 GT ./. chr1 144200106 . G . . LowGQX END=144200305 GT ./. chr1 144200942 . T . . LowGQX END=144201102 GT ./. chr1 144201634 . T . . LowGQX END=144201878 GT ./. chr1 144202503 . C . . LowGQX END=144202663 GT ./. chr1 144203299 . G . . LowGQX END=144203498 GT ./. chr1 144204135 . T . . LowGQX END=144204295 GT ./. chr1 144204854 . T . . LowGQX END=144205098 GT ./. chr1 144205733 . C . . LowGQX END=144205893 GT ./. chr1 144206476 . G . . LowGQX END=144206650 GT ./. chr1 144207275 . C . . LowGQX END=144207435 GT ./. chr1 144208061 . G . . LowGQX END=144208260 GT ./. chr1 144208897 . T . . LowGQX END=144209057 GT ./. chr1 144209589 . T . . LowGQX END=144209833 GT ./. chr1 144210458 . C . . LowGQX END=144210618 GT ./. chr1 144211245 . G . . LowGQX END=144211444 GT ./. chr1 144212081 . G . . LowGQX END=144212242 GT ./. chr1 144212844 . G . . LowGQX END=144213178 GT ./. chr1 144213643 . C . . LowGQX END=144213803 GT ./. chr1 144214429 . G . . LowGQX END=144214628 GT ./. chr1 144215265 . T . . LowGQX END=144215425 GT ./. chr1 144215956 . A . . LowGQX END=144216201 GT ./. chr1 144216826 . C . . LowGQX END=144216986 GT ./. chr1 144217611 . G . . LowGQX END=144217810 GT ./. chr1 144218447 . G . . LowGQX END=144218608 GT ./. chr1 144219235 . G . . LowGQX END=144219474 GT ./. chr1 144220043 . T . . LowGQX END=144220203 GT ./. chr1 144220786 . G . . LowGQX END=144220960 GT ./. chr1 144221585 . C . . LowGQX END=144221745 GT ./. chr1 144222378 . G . . LowGQX END=144222577 GT ./. chr1 144223214 . G . . LowGQX END=144223375 GT ./. chr1 144223931 . A . . LowGQX END=144224271 GT ./. chr1 144339766 . G . . LowGQX END=144340406 GT ./. chr1 144363676 . A . . LowGQX END=144364175 GT ./. chr1 144520635 . T . . LowGQX END=144520793 GT ./. chr1 144520794 . G . . LowGQX END=144520833;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:47 chr1 144615130 . C . . LowGQX END=144615304 GT ./. chr1 144617149 . G . . LowGQX END=144617253 GT ./. chr1 144618081 . G . . LowGQX END=144618297 GT ./. chr1 144619343 . A . . LowGQX END=144619443 GT ./. chr1 144619882 . G . . LowGQX END=144620095 GT ./. chr1 144621446 . G . . LowGQX END=144621657 GT ./. chr1 144676859 . A . . LowGQX END=144677050 GT ./. chr1 144677239 . C . . LowGQX END=144677418 GT ./. chr1 144679882 . T . . LowGQX END=144679982 GT ./. chr1 144811743 . C . . LowGQX END=144811958 GT ./. chr1 144813741 . G . . LowGQX END=144813845 GT ./. chr1 144814679 . G . . LowGQX END=144814895 GT ./. chr1 144815922 . T . . LowGQX END=144816022 GT ./. chr1 144816472 . G . . LowGQX END=144816679 GT ./. chr1 144817882 . C . . LowGQX END=144818042 GT ./. chr1 144821920 . G . . LowGQX END=144822085 GT ./. chr1 144823104 . G . . LowGQX END=144823204 GT ./. chr1 144823812 . G . . LowGQX END=144823986 GT ./. chr1 144824681 . T . . LowGQX END=144824781 GT ./. chr1 144825352 . G . . LowGQX END=144825526 GT ./. chr1 144825676 . C . . LowGQX END=144825836 GT ./. chr1 144826211 . T . . LowGQX END=144826311 GT ./. chr1 144826932 . G . . LowGQX END=144827131 GT ./. chr1 144827768 . G . . LowGQX END=144827929 GT ./. chr1 144828540 . G . . LowGQX END=144828785 GT ./. chr1 144852349 . G . . LowGQX END=144852529 GT ./. chr1 144854139 . T . . LowGQX END=144854239 GT ./. chr1 144854516 . A . . LowGQX END=144854659 GT ./. chr1 144855738 . A . . LowGQX END=144855886 GT ./. chr1 144856814 . A . . LowGQX END=144857045 GT ./. chr1 144857610 . A . . LowGQX END=144857731 GT ./. chr1 144859757 . A . . LowGQX END=144860001 GT ./. chr1 144863316 . A . . LowGQX END=144863445 GT ./. chr1 144864131 . T . . LowGQX END=144864327 GT ./. chr1 144865808 . A . . LowGQX END=144865932 GT ./. chr1 144866590 . A . . LowGQX END=144866726 GT ./. chr1 144867919 . A . . LowGQX END=144868175 GT ./. chr1 144871694 . A . . LowGQX END=144871884 GT ./. chr1 144873875 . A . . LowGQX END=144874032 GT ./. chr1 144874679 . A . . LowGQX END=144874907 GT ./. chr1 144875953 . T . . LowGQX END=144876053 GT ./. chr1 144877034 . A . . LowGQX END=144877274 GT ./. chr1 144879033 . A . . LowGQX END=144879566 GT ./. chr1 144880740 . A . . LowGQX END=144880864 GT ./. chr1 144881428 . A . . LowGQX END=144881625 GT ./. chr1 144882444 . A . . LowGQX END=144882884 GT ./. chr1 144886095 . A . . LowGQX END=144886332 GT ./. chr1 144890934 . A . . LowGQX END=144891034 GT ./. chr1 144892167 . C . . LowGQX END=144892267 GT ./. chr1 144892437 . A . . LowGQX END=144892592 GT ./. chr1 144895220 . A . . LowGQX END=144895320 GT ./. chr1 144903029 . C . . LowGQX END=144903207 GT ./. chr1 144904623 . A . . LowGQX END=144904740 GT ./. chr1 144906057 . A . . LowGQX END=144906199 GT ./. chr1 144906419 . A . . LowGQX END=144906540 GT ./. chr1 144909865 . T . . LowGQX END=144909965 GT ./. chr1 144911873 . G . . LowGQX END=144911973 GT ./. chr1 144912128 . A . . LowGQX END=144912297 GT ./. chr1 144915443 . A . . LowGQX END=144915642 GT ./. chr1 144916568 . G . . LowGQX END=144916752 GT ./. chr1 144917497 . A . . LowGQX END=144917639 GT ./. chr1 144917817 . A . . LowGQX END=144917935 GT ./. chr1 144918831 . A . . LowGQX END=144918994 GT ./. chr1 144921833 . A . . LowGQX END=144922050 GT ./. chr1 144922184 . T . . LowGQX END=144922284 GT ./. chr1 144922517 . A . . LowGQX END=144922641 GT ./. chr1 144923688 . A . . LowGQX END=144923824 GT ./. chr1 144930572 . C . . LowGQX END=144931712 GT ./. chr1 144946561 . A . . LowGQX END=144946745 GT ./. chr1 144952000 . C . . LowGQX END=144952100 GT ./. chr1 144952195 . A . . LowGQX END=144952379 GT ./. chr1 144952564 . A . . LowGQX END=144952743 GT ./. chr1 144955205 . T . . LowGQX END=144955305 GT ./. chr1 144994589 . A . . LowGQX END=144994734 GT ./. chr1 144994925 . T . . LowGQX END=144995025 GT ./. chr1 145014067 . G . . LowGQX END=145014314 GT ./. chr1 145015838 . A . . LowGQX END=145016014 GT ./. chr1 145017942 . C . . LowGQX END=145018042 GT ./. chr1 145021090 . G . . LowGQX END=145021190 GT ./. chr1 145038879 . C . . LowGQX END=145038979 GT ./. chr1 145039550 . C . . LowGQX END=145039650 GT ./. chr1 145074962 . G . . LowGQX END=145075062 GT ./. chr1 145075557 . A . . LowGQX END=145075927 GT ./. chr1 145096534 . G . . LowGQX END=145096634 GT ./. chr1 145103907 . G . . LowGQX END=145104018 GT ./. chr1 145109523 . G . . LowGQX END=145109685 GT ./. chr1 145112372 . G . . LowGQX END=145112520 GT ./. chr1 145115734 . G . . LowGQX END=145115890 GT ./. chr1 145209106 . A . . LowGQX END=145209446 GT ./. chr1 145248826 . A . . LowGQX END=145248926 GT ./. chr1 145273183 . A . . LowGQX END=145273447 GT ./. chr1 145281367 . A . . LowGQX END=145281707 GT ./. chr1 145281944 . C . . LowGQX END=145282044 GT ./. chr1 145290408 . A . . LowGQX END=145290508 GT ./. chr1 145293105 . C . . LowGQX END=145293205 GT ./. chr1 145293405 . C . . LowGQX END=145293581 GT ./. chr1 145295371 . A . . LowGQX END=145295526 GT ./. chr1 145296356 . G . . LowGQX END=145296572 GT ./. chr1 145297605 . T . . LowGQX END=145297705 GT ./. chr1 145298154 . G . . LowGQX END=145298367 GT ./. chr1 145299729 . G . . LowGQX END=145299940 GT ./. chr1 145301719 . G . . LowGQX END=145301823 GT ./. chr1 145302653 . G . . LowGQX END=145302869 GT ./. chr1 145303896 . T . . LowGQX END=145303996 GT ./. chr1 145304446 . G . . LowGQX END=145304653 GT ./. chr1 145305861 . C . . LowGQX END=145306021 GT ./. chr1 145309899 . G . . LowGQX END=145310064 GT ./. chr1 145311079 . G . . LowGQX END=145311179 GT ./. chr1 145311791 . G . . LowGQX END=145311959 GT ./. chr1 145312654 . T . . LowGQX END=145312754 GT ./. chr1 145313333 . G . . LowGQX END=145313507 GT ./. chr1 145314134 . C . . LowGQX END=145314294 GT ./. chr1 145314903 . G . . LowGQX END=145315102 GT ./. chr1 145315739 . G . . LowGQX END=145315900 GT ./. chr1 145316511 . G . . LowGQX END=145316710 GT ./. chr1 145317322 . C . . LowGQX END=145317482 GT ./. chr1 145317982 . A . . LowGQX END=145318227 GT ./. chr1 145318852 . C . . LowGQX END=145319012 GT ./. chr1 145319623 . G . . LowGQX END=145319822 GT ./. chr1 145320459 . G . . LowGQX END=145320620 GT ./. chr1 145321229 . G . . LowGQX END=145321428 GT ./. chr1 145322040 . C . . LowGQX END=145322200 GT ./. chr1 145322700 . A . . LowGQX END=145322945 GT ./. chr1 145323630 . T . . LowGQX END=145323730 GT ./. chr1 145324347 . G . . LowGQX END=145324546 GT ./. chr1 145325183 . G . . LowGQX END=145325344 GT ./. chr1 145325951 . G . . LowGQX END=145326150 GT ./. chr1 145326762 . C . . LowGQX END=145326922 GT ./. chr1 145327481 . C . . LowGQX END=145327666 GT ./. chr1 145328294 . T . . LowGQX END=145328454 GT ./. chr1 145329078 . G . . LowGQX END=145329277 GT ./. chr1 145329965 . G . . LowGQX END=145330075 GT ./. chr1 145330682 . G . . LowGQX END=145330881 GT ./. chr1 145331491 . C . . LowGQX END=145331651 GT ./. chr1 145332151 . A . . LowGQX END=145332396 GT ./. chr1 145333021 . C . . LowGQX END=145333181 GT ./. chr1 145333796 . G . . LowGQX END=145333995 GT ./. chr1 145334632 . G . . LowGQX END=145334793 GT ./. chr1 145335388 . G . . LowGQX END=145335587 GT ./. chr1 145336197 . C . . LowGQX END=145336357 GT ./. chr1 145336857 . A . . LowGQX END=145337102 GT ./. chr1 145337727 . C . . LowGQX END=145337887 GT ./. chr1 145338516 . G . . LowGQX END=145338715 GT ./. chr1 145339352 . G . . LowGQX END=145339513 GT ./. chr1 145340108 . G . . LowGQX END=145340307 GT ./. chr1 145340917 . C . . LowGQX END=145341077 GT ./. chr1 145341577 . A . . LowGQX END=145341822 GT ./. chr1 145342447 . C . . LowGQX END=145342607 GT ./. chr1 145343240 . G . . LowGQX END=145343439 GT ./. chr1 145344076 . G . . LowGQX END=145344237 GT ./. chr1 145344832 . G . . LowGQX END=145345031 GT ./. chr1 145345641 . C . . LowGQX END=145345801 GT ./. chr1 145346301 . A . . LowGQX END=145346546 GT ./. chr1 145347171 . C . . LowGQX END=145347331 GT ./. chr1 145347964 . G . . LowGQX END=145348163 GT ./. chr1 145348800 . G . . LowGQX END=145348961 GT ./. chr1 145349562 . G . . LowGQX END=145349761 GT ./. chr1 145350371 . C . . LowGQX END=145350531 GT ./. chr1 145351031 . A . . LowGQX END=145351276 GT ./. chr1 145351901 . C . . LowGQX END=145352061 GT ./. chr1 145352684 . G . . LowGQX END=145352883 GT ./. chr1 145353520 . G . . LowGQX END=145353681 GT ./. chr1 145354294 . G . . LowGQX END=145354493 GT ./. chr1 145355103 . C . . LowGQX END=145355263 GT ./. chr1 145355765 . A . . LowGQX END=145356010 GT ./. chr1 145356635 . C . . LowGQX END=145356795 GT ./. chr1 145357416 . G . . LowGQX END=145357615 GT ./. chr1 145358252 . G . . LowGQX END=145358413 GT ./. chr1 145359014 . G . . LowGQX END=145359188 GT ./. chr1 145359823 . C . . LowGQX END=145359983 GT ./. chr1 145360483 . A . . LowGQX END=145360728 GT ./. chr1 145361365 . C . . LowGQX END=145361525 GT ./. chr1 145362065 . G . . LowGQX END=145362270 GT ./. chr1 145362895 . C . . LowGQX END=145363055 GT ./. chr1 145363678 . G . . LowGQX END=145363877 GT ./. chr1 145364514 . G . . LowGQX END=145364675 GT ./. chr1 145365286 . G . . LowGQX END=145365460 GT ./. chr1 145366155 . T . . LowGQX END=145366255 GT ./. chr1 145366826 . G . . LowGQX END=145367000 GT ./. chr1 145367713 . G . . LowGQX END=145367823 GT ./. chr1 145368440 . G . . LowGQX END=145368685 GT ./. chr1 145414731 . A . . LowGQX END=145414930 GT ./. chr1 145415228 . T . . LowGQX END=145415890 GT ./. chr1 145416262 . G . . LowGQX END=145416988 GT ./. chr1 145438801 . T . . LowGQX END=145439055 GT ./. chr1 145439508 . A . . LowGQX END=145439668 GT ./. chr1 145439776 . A . . LowGQX END=145439928 GT ./. chr1 145440036 . A . . LowGQX END=145440143 GT ./. chr1 145440267 . A . . LowGQX END=145440528 GT ./. chr1 145440630 . A . . LowGQX END=145440791 GT ./. chr1 145440900 . A . . LowGQX END=145441056 GT ./. chr1 145441151 . C . . LowGQX END=145441251 GT ./. chr1 145456631 . C . . LowGQX END=145456731 GT ./. chr1 145456989 . A . . LowGQX END=145457107 GT ./. chr1 145457223 . A . . LowGQX END=145457323 GT ./. chr1 145457527 . C . . LowGQX END=145457627 GT ./. chr1 145457920 . G . . LowGQX END=145458020 GT ./. chr1 145459650 . A . . LowGQX END=145459784 GT ./. chr1 145460054 . C . . LowGQX END=145460265 GT ./. chr1 145473327 . C . . LowGQX END=145474822 GT ./. chr1 145477146 . A . . LowGQX END=145477456 GT ./. chr1 145487302 . A . . LowGQX END=145487470 GT ./. chr1 145492233 . A . . LowGQX END=145492378 GT ./. chr1 145497391 . A . . LowGQX END=145497491 GT ./. chr1 145498092 . T . . LowGQX END=145498192 GT ./. chr1 145498534 . A . . LowGQX END=145498781 GT ./. chr1 145507591 . A . . LowGQX END=145507751 GT ./. chr1 145507996 . T . . LowGQX END=145508096 GT ./. chr1 145508196 . G . . LowGQX END=145508296 GT ./. chr1 145508473 . A . . LowGQX END=145508614 GT ./. chr1 145508914 . A . . LowGQX END=145509055 GT ./. chr1 145509139 . C . . LowGQX END=145509239 GT ./. chr1 145509848 . A . . LowGQX END=145510288 GT ./. chr1 145510727 . C . . LowGQX END=145510939 GT ./. chr1 145515188 . C . . LowGQX END=145515420 GT ./. chr1 145515634 . C . . LowGQX END=145515734 GT ./. chr1 145516379 . C . . LowGQX END=145516479 GT ./. chr1 145516541 . A . . LowGQX END=145516701 GT ./. chr1 145517271 . A . . LowGQX END=145517391 GT ./. chr1 145518069 . A . . LowGQX END=145518275 GT ./. chr1 145522512 . A . . LowGQX END=145522922 GT ./. chr1 145525042 . A . . LowGQX END=145525142 GT ./. chr1 145527611 . A . . LowGQX END=145527727 GT ./. chr1 145527873 . T . . LowGQX END=145528040 GT ./. chr1 145528252 . A . . LowGQX END=145528355 GT ./. chr1 145528568 . A . . LowGQX END=145528687 GT ./. chr1 145530265 . A . . LowGQX END=145530397 GT ./. chr1 145530876 . A . . LowGQX END=145531029 GT ./. chr1 145532113 . A . . LowGQX END=145532268 GT ./. chr1 145532455 . A . . LowGQX END=145532625 GT ./. chr1 145532744 . T . . LowGQX END=145532844 GT ./. chr1 145533053 . A . . LowGQX END=145533202 GT ./. chr1 145533410 . A . . LowGQX END=145533563 GT ./. chr1 145533796 . A . . LowGQX END=145533944 GT ./. chr1 145534081 . A . . LowGQX END=145534289 GT ./. chr1 145534887 . A . . LowGQX END=145535022 GT ./. chr1 145535733 . A . . LowGQX END=145535962 GT ./. chr1 145535965 . C . . LowGQX END=145536143 GT ./. chr1 145536851 . A . . LowGQX END=145536969 GT ./. chr1 145537169 . C . . LowGQX END=145537269 GT ./. chr1 145537421 . A . . LowGQX END=145537567 GT ./. chr1 145537734 . C . . LowGQX END=145537834 GT ./. chr1 145537978 . C . . LowGQX END=145538078 GT ./. chr1 145538213 . T . . LowGQX END=145538313 GT ./. chr1 145538717 . C . . LowGQX END=145538817 GT ./. chr1 145538978 . A . . LowGQX END=145539096 GT ./. chr1 145539356 . T . . LowGQX END=145539456 GT ./. chr1 145539681 . A . . LowGQX END=145539799 GT ./. chr1 145541439 . A . . LowGQX END=145541539 GT ./. chr1 145541800 . A . . LowGQX END=145541918 GT ./. chr1 145542196 . T . . LowGQX END=145542296 GT ./. chr1 145549287 . T . . LowGQX END=145549387 GT ./. chr1 145555690 . A . . LowGQX END=145555825 GT ./. chr1 145556596 . G . . LowGQX END=145556696 GT ./. chr1 145557031 . C . . LowGQX END=145557131 GT ./. chr1 145558187 . T . . LowGQX END=145558287 GT ./. chr1 145558428 . C . . LowGQX END=145558528 GT ./. chr1 145558833 . A . . LowGQX END=145558944 GT ./. chr1 145560073 . A . . LowGQX END=145560262 GT ./. chr1 145560858 . T . . LowGQX END=145560958 GT ./. chr1 145561094 . A . . LowGQX END=145563109 GT ./. chr1 145566681 . C . . LowGQX END=145566781 GT ./. chr1 145567013 . T . . LowGQX END=145567113 GT ./. chr1 145567676 . C . . LowGQX END=145567776 GT ./. chr1 145575981 . A . . LowGQX END=145576141 GT ./. chr1 145578060 . A . . LowGQX END=145578482 GT ./. chr1 145578630 . T . . LowGQX END=145578730 GT ./. chr1 145578926 . T . . LowGQX END=145579026 GT ./. chr1 145579178 . T . . LowGQX END=145579338 GT ./. chr1 145580186 . A . . LowGQX END=145580419 GT ./. chr1 145580503 . A . . LowGQX END=145580613 GT ./. chr1 145581169 . A . . LowGQX END=145581269 GT ./. chr1 145581402 . A . . LowGQX END=145581567 GT ./. chr1 145583913 . A . . LowGQX END=145584051 GT ./. chr1 145584127 . A . . LowGQX END=145584300 GT ./. chr1 145584480 . A . . LowGQX END=145584618 GT ./. chr1 145584768 . A . . LowGQX END=145584868 GT ./. chr1 145585354 . A . . LowGQX END=145585625 GT ./. chr1 145586587 . C . . LowGQX END=145586694 GT ./. chr1 145586802 . A . . LowGQX END=145586959 GT ./. chr1 145587347 . A . . LowGQX END=145587488 GT ./. chr1 145587718 . A . . LowGQX END=145587821 GT ./. chr1 145588375 . C . . LowGQX END=145588475 GT ./. chr1 145588606 . T . . LowGQX END=145589430 GT ./. chr1 145592627 . A . . LowGQX END=145592781 GT ./. chr1 145594037 . A . . LowGQX END=145594191 GT ./. chr1 145594920 . T . . LowGQX END=145595020 GT ./. chr1 145595117 . A . . LowGQX END=145595223 GT ./. chr1 145596902 . A . . LowGQX END=145597057 GT ./. chr1 145597442 . T . . LowGQX END=145597595 GT ./. chr1 145598220 . T . . LowGQX END=145598372 GT ./. chr1 145598527 . C . . LowGQX END=145598627 GT ./. chr1 145601527 . C . . LowGQX END=145601627 GT ./. chr1 145601746 . A . . LowGQX END=145601855 GT ./. chr1 145606270 . A . . LowGQX END=145606370 GT ./. chr1 145608086 . T . . LowGQX END=145608296 GT ./. chr1 145608402 . A . . LowGQX END=145608662 GT ./. chr1 145609188 . A . . LowGQX END=145609357 GT ./. chr1 145610526 . T . . LowGQX END=145610626 GT ./. chr1 145611238 . A . . LowGQX END=145611344 GT ./. chr1 145646095 . T . . LowGQX END=145646195 GT ./. chr1 145646246 . A . . LowGQX END=145646346 GT ./. chr1 145647968 . G . . LowGQX END=145648068 GT ./. chr1 145650462 . A . . LowGQX END=145650562 GT ./. chr1 145663157 . A . . LowGQX END=145663370 GT ./. chr1 145682009 . T . . LowGQX END=145682109 GT ./. chr1 145683562 . A . . LowGQX END=145683662 GT ./. chr1 145684582 . T . . LowGQX END=145684682 GT ./. chr1 145686974 . A . . LowGQX END=145687094 GT ./. chr1 145688087 . A . . LowGQX END=145688223 GT ./. chr1 145696547 . A . . LowGQX END=145696647 GT ./. chr1 145698785 . A . . LowGQX END=145699093 GT ./. chr1 145704015 . A . . LowGQX END=145704346 GT ./. chr1 145706673 . G . . LowGQX END=145706773 GT ./. chr1 145746981 . G . . LowGQX END=145747301 GT ./. chr1 145748336 . A . . LowGQX END=145748590 GT ./. chr1 145752395 . C . . LowGQX END=145752567 GT ./. chr1 145753952 . C . . LowGQX END=145754153 GT ./. chr1 145756404 . T . . LowGQX END=145756624 GT ./. chr1 145761105 . A . . LowGQX END=145761465 GT ./. chr1 145762026 . C . . LowGQX END=145762336 GT ./. chr1 145763547 . A . . LowGQX END=145763647 GT ./. chr1 145765017 . G . . LowGQX END=145765437 GT ./. chr1 145769403 . C . . LowGQX END=145769555 GT ./. chr1 145771633 . A . . LowGQX END=145771733 GT ./. chr1 145787709 . T . . LowGQX END=145787869 GT ./. chr1 145788762 . T . . LowGQX END=145788862 GT ./. chr1 145791010 . G . . LowGQX END=145791173 GT ./. chr1 145803245 . C . . LowGQX END=145803399 GT ./. chr1 145804202 . A . . LowGQX END=145804368 GT ./. chr1 145811270 . A . . LowGQX END=145811509 GT ./. chr1 145811894 . A . . LowGQX END=145812005 GT ./. chr1 145816584 . T . . LowGQX END=145816743 GT ./. chr1 145818747 . A . . LowGQX END=145818847 GT ./. chr1 145826552 . C . . LowGQX END=145826716 GT ./. chr1 145826859 . G . . LowGQX END=145826959 GT ./. chr1 145883826 . G . . LowGQX END=145883999 GT ./. chr1 145884793 . C . . LowGQX END=145884945 GT ./. chr1 145897084 . G . . LowGQX END=145897243 GT ./. chr1 145898780 . A . . LowGQX END=145898940 GT ./. chr1 145899344 . T . . LowGQX END=145899500 GT ./. chr1 145900336 . C . . LowGQX END=145900494 GT ./. chr1 145916663 . C . . LowGQX END=145916823 GT ./. chr1 145918896 . C . . LowGQX END=145919053 GT ./. chr1 145922951 . G . . LowGQX END=145923111 GT ./. chr1 145923236 . G . . LowGQX END=145923505 GT ./. chr1 145924744 . C . . LowGQX END=145924904 GT ./. chr1 145926111 . C . . LowGQX END=145926421 GT ./. chr1 145926978 . T . . LowGQX END=145927338 GT ./. chr1 145931833 . G . . LowGQX END=145932041 GT ./. chr1 145934312 . C . . LowGQX END=145934501 GT ./. chr1 146034153 . A . . LowGQX END=146034423 GT ./. chr1 146035037 . A . . LowGQX END=146035196 GT ./. chr1 146035849 . G . . LowGQX END=146036033 GT ./. chr1 146036605 . A . . LowGQX END=146036765 GT ./. chr1 146037437 . G . . LowGQX END=146037625 GT ./. chr1 146038135 . A . . LowGQX END=146038295 GT ./. chr1 146038988 . A . . LowGQX END=146039187 GT ./. chr1 146039712 . A . . LowGQX END=146039872 GT ./. chr1 146040867 . C . . LowGQX END=146041056 GT ./. chr1 146044865 . T . . LowGQX END=146045025 GT ./. chr1 146046217 . A . . LowGQX END=146046567 GT ./. chr1 146046887 . C . . LowGQX END=146047047 GT ./. chr1 146047996 . T . . LowGQX END=146048346 GT ./. chr1 146049115 . A . . LowGQX END=146049274 GT ./. chr1 146050925 . G . . LowGQX END=146051275 GT ./. chr1 146052479 . A . . LowGQX END=146052829 GT ./. chr1 146053153 . C . . LowGQX END=146053313 GT ./. chr1 146054226 . T . . LowGQX END=146054576 GT ./. chr1 146055293 . T . . LowGQX END=146055448 GT ./. chr1 146057202 . A . . LowGQX END=146057552 GT ./. chr1 146066114 . C . . LowGQX END=146066283 GT ./. chr1 146076825 . G . . LowGQX END=146077375 GT ./. chr1 146079591 . C . . LowGQX END=146080021 GT ./. chr1 146215063 . A . . LowGQX END=146215343 GT ./. chr1 146215891 . T . . LowGQX END=146216052 GT ./. chr1 146216755 . A . . LowGQX END=146216966 GT ./. chr1 146217514 . A . . LowGQX END=146217674 GT ./. chr1 146218359 . T . . LowGQX END=146218558 GT ./. chr1 146219043 . A . . LowGQX END=146219203 GT ./. chr1 146219898 . C . . LowGQX END=146220097 GT ./. chr1 146220583 . A . . LowGQX END=146220743 GT ./. chr1 146221438 . C . . LowGQX END=146221637 GT ./. chr1 146222185 . T . . LowGQX END=146222345 GT ./. chr1 146223048 . A . . LowGQX END=146223232 GT ./. chr1 146223818 . A . . LowGQX END=146223978 GT ./. chr1 146224663 . T . . LowGQX END=146224862 GT ./. chr1 146225348 . A . . LowGQX END=146225508 GT ./. chr1 146226203 . C . . LowGQX END=146226402 GT ./. chr1 146226888 . A . . LowGQX END=146227048 GT ./. chr1 146227743 . C . . LowGQX END=146227942 GT ./. chr1 146228478 . T . . LowGQX END=146228638 GT ./. chr1 146229341 . A . . LowGQX END=146229525 GT ./. chr1 146230109 . A . . LowGQX END=146230269 GT ./. chr1 146230954 . T . . LowGQX END=146231153 GT ./. chr1 146231639 . A . . LowGQX END=146231799 GT ./. chr1 146232483 . A . . LowGQX END=146232676 GT ./. chr1 146233206 . A . . LowGQX END=146233366 GT ./. chr1 146234353 . A . . LowGQX END=146234548 GT ./. chr1 146238379 . T . . LowGQX END=146238539 GT ./. chr1 146239745 . T . . LowGQX END=146240085 GT ./. chr1 146240414 . C . . LowGQX END=146240574 GT ./. chr1 146241526 . T . . LowGQX END=146241876 GT ./. chr1 146242596 . T . . LowGQX END=146242750 GT ./. chr1 146244437 . G . . LowGQX END=146244787 GT ./. chr1 146246000 . T . . LowGQX END=146246350 GT ./. chr1 146246676 . A . . LowGQX END=146246833 GT ./. chr1 146247798 . G . . LowGQX END=146248148 GT ./. chr1 146248864 . T . . LowGQX END=146249075 GT ./. chr1 146250719 . G . . LowGQX END=146251069 GT ./. chr1 146252292 . A . . LowGQX END=146252642 GT ./. chr1 146252965 . C . . LowGQX END=146253178 GT ./. chr1 146395341 . C . . LowGQX END=146395517 GT ./. chr1 146397358 . G . . LowGQX END=146397462 GT ./. chr1 146398292 . G . . LowGQX END=146398508 GT ./. chr1 146399541 . T . . LowGQX END=146399641 GT ./. chr1 146400019 . A . . LowGQX END=146400369 GT ./. chr1 146401599 . C . . LowGQX END=146401949 GT ./. chr1 146403603 . A . . LowGQX END=146403814 GT ./. chr1 146404517 . T . . LowGQX END=146404867 GT ./. chr1 146405780 . C . . LowGQX END=146405940 GT ./. chr1 146406318 . A . . LowGQX END=146406668 GT ./. chr1 146407886 . C . . LowGQX END=146408236 GT ./. chr1 146409894 . A . . LowGQX END=146410049 GT ./. chr1 146410812 . T . . LowGQX END=146411162 GT ./. chr1 146412062 . G . . LowGQX END=146412222 GT ./. chr1 146412601 . A . . LowGQX END=146412941 GT ./. chr1 146414084 . C . . LowGQX END=146414244 GT ./. chr1 146418066 . A . . LowGQX END=146418416 GT ./. chr1 146418425 . T . . LowGQX END=146418585 GT ./. chr1 146419260 . T . . LowGQX END=146419420 GT ./. chr1 146419947 . A . . LowGQX END=146420192 GT ./. chr1 146420827 . C . . LowGQX END=146420987 GT ./. chr1 146421547 . C . . LowGQX END=146421732 GT ./. chr1 146422357 . C . . LowGQX END=146422517 GT ./. chr1 146423162 . G . . LowGQX END=146423361 GT ./. chr1 146423998 . G . . LowGQX END=146424159 GT ./. chr1 146424772 . C . . LowGQX END=146424957 GT ./. chr1 146425592 . C . . LowGQX END=146425752 GT ./. chr1 146426312 . C . . LowGQX END=146426497 GT ./. chr1 146427122 . C . . LowGQX END=146427282 GT ./. chr1 146427927 . G . . LowGQX END=146428126 GT ./. chr1 146428763 . G . . LowGQX END=146428924 GT ./. chr1 146429537 . C . . LowGQX END=146429722 GT ./. chr1 146430357 . C . . LowGQX END=146430517 GT ./. chr1 146431077 . C . . LowGQX END=146431262 GT ./. chr1 146431887 . C . . LowGQX END=146432047 GT ./. chr1 146432692 . G . . LowGQX END=146432891 GT ./. chr1 146433528 . G . . LowGQX END=146433689 GT ./. chr1 146434302 . C . . LowGQX END=146434487 GT ./. chr1 146435122 . C . . LowGQX END=146435282 GT ./. chr1 146435842 . C . . LowGQX END=146436027 GT ./. chr1 146436652 . C . . LowGQX END=146436812 GT ./. chr1 146437457 . G . . LowGQX END=146437656 GT ./. chr1 146438293 . G . . LowGQX END=146438454 GT ./. chr1 146439067 . C . . LowGQX END=146439252 GT ./. chr1 146439883 . A . . LowGQX END=146440043 GT ./. chr1 146440607 . C . . LowGQX END=146440792 GT ./. chr1 146441424 . C . . LowGQX END=146441584 GT ./. chr1 146442142 . C . . LowGQX END=146442327 GT ./. chr1 146442962 . C . . LowGQX END=146443122 GT ./. chr1 146443621 . A . . LowGQX END=146443866 GT ./. chr1 146444491 . C . . LowGQX END=146444651 GT ./. chr1 146445298 . G . . LowGQX END=146445497 GT ./. chr1 146446102 . C . . LowGQX END=146446262 GT ./. chr1 146446822 . C . . LowGQX END=146447007 GT ./. chr1 146447642 . C . . LowGQX END=146447802 GT ./. chr1 146448302 . A . . LowGQX END=146448547 GT ./. chr1 146449172 . C . . LowGQX END=146449332 GT ./. chr1 146449977 . G . . LowGQX END=146450176 GT ./. chr1 146450813 . G . . LowGQX END=146450974 GT ./. chr1 146451587 . C . . LowGQX END=146451772 GT ./. chr1 146452407 . C . . LowGQX END=146452567 GT ./. chr1 146453126 . C . . LowGQX END=146453311 GT ./. chr1 146453936 . C . . LowGQX END=146454096 GT ./. chr1 146454737 . G . . LowGQX END=146454936 GT ./. chr1 146455573 . G . . LowGQX END=146455734 GT ./. chr1 146456347 . C . . LowGQX END=146456532 GT ./. chr1 146457167 . C . . LowGQX END=146457327 GT ./. chr1 146457826 . A . . LowGQX END=146458071 GT ./. chr1 146458696 . C . . LowGQX END=146458856 GT ./. chr1 146459497 . G . . LowGQX END=146459696 GT ./. chr1 146460333 . G . . LowGQX END=146460494 GT ./. chr1 146461107 . C . . LowGQX END=146461292 GT ./. chr1 146461927 . C . . LowGQX END=146462087 GT ./. chr1 146462586 . A . . LowGQX END=146462831 GT ./. chr1 146463456 . C . . LowGQX END=146463616 GT ./. chr1 146464263 . G . . LowGQX END=146464462 GT ./. chr1 146465099 . G . . LowGQX END=146465260 GT ./. chr1 146465877 . G . . LowGQX END=146466122 GT ./. chr1 146491108 . T . . LowGQX END=146491254 GT ./. chr1 146493270 . G . . LowGQX END=146493450 GT ./. chr1 146494495 . C . . LowGQX END=146494639 GT ./. chr1 146495572 . C . . LowGQX END=146495799 GT ./. chr1 146496367 . C . . LowGQX END=146496484 GT ./. chr1 146514468 . A . . LowGQX END=146514568 GT ./. chr1 146631133 . A . . LowGQX END=146631233 GT ./. chr1 146633249 . T . . LowGQX END=146633362 GT ./. chr1 146634017 . A . . LowGQX END=146634155 GT ./. chr1 146638075 . A . . LowGQX END=146638200 GT ./. chr1 146638422 . T . . LowGQX END=146638522 GT ./. chr1 146639344 . A . . LowGQX END=146639515 GT ./. chr1 146643536 . A . . LowGQX END=146643726 GT ./. chr1 146649693 . A . . LowGQX END=146651079 GT ./. chr1 146656070 . G . . LowGQX END=146656210 GT ./. chr1 146658477 . A . . LowGQX END=146658827 GT ./. chr1 146661743 . G . . LowGQX END=146661843 GT ./. chr1 146672732 . A . . LowGQX END=146673089 GT ./. chr1 146680383 . C . . LowGQX END=146680616 GT ./. chr1 146683959 . A . . LowGQX END=146684106 GT ./. chr1 146684873 . A . . LowGQX END=146685040 GT ./. chr1 146687322 . A . . LowGQX END=146687515 GT ./. chr1 146696485 . A . . LowGQX END=146696624 GT ./. chr1 146714352 . C . . LowGQX END=146714521 GT ./. chr1 146724276 . A . . LowGQX END=146724393 GT ./. chr1 146726523 . A . . LowGQX END=146726634 GT ./. chr1 146727466 . A . . LowGQX END=146727585 GT ./. chr1 146728151 . G . . LowGQX END=146728251 GT ./. chr1 146731482 . C . . LowGQX END=146731582 GT ./. chr1 146736049 . G . . LowGQX END=146736246 GT ./. chr1 146737589 . A . . LowGQX END=146737749 GT ./. chr1 146739082 . C . . LowGQX END=146739182 GT ./. chr1 146740439 . A . . LowGQX END=146740540 GT ./. chr1 146742580 . T . . LowGQX END=146742680 GT ./. chr1 146743830 . A . . LowGQX END=146743945 GT ./. chr1 146747015 . A . . LowGQX END=146747134 GT ./. chr1 146747766 . A . . LowGQX END=146747924 GT ./. chr1 146751667 . T . . LowGQX END=146751867 GT ./. chr1 146756022 . A . . LowGQX END=146756175 GT ./. chr1 146756999 . A . . LowGQX END=146757167 GT ./. chr1 146757973 . A . . LowGQX END=146758180 GT ./. chr1 146759312 . A . . LowGQX END=146759415 GT ./. chr1 146763150 . C . . LowGQX END=146763250 GT ./. chr1 146765290 . A . . LowGQX END=146765409 GT ./. chr1 146766089 . A . . LowGQX END=146766202 GT ./. chr1 146767050 . A . . LowGQX END=146767202 GT ./. chr1 147083613 . C . . LowGQX END=147083713 GT ./. chr1 147084669 . T . . LowGQX END=147085009 GT ./. chr1 147086214 . T . . LowGQX END=147086418 GT ./. chr1 147087601 . A . . LowGQX END=147087705 GT ./. chr1 147090620 . A . . LowGQX END=147092866 GT ./. chr1 147094070 . A . . LowGQX END=147094335 GT ./. chr1 147095641 . A . . LowGQX END=147096763 GT ./. chr1 147119223 . A . . LowGQX END=147119371 GT ./. chr1 147120046 . A . . LowGQX END=147120216 GT ./. chr1 147121884 . C . . LowGQX END=147122044 GT ./. chr1 147124250 . A . . LowGQX END=147124355 GT ./. chr1 147124383 . A . . LowGQX END=147124483 GT ./. chr1 147126307 . A . . LowGQX END=147126444 GT ./. chr1 147127270 . A . . LowGQX END=147127370 GT ./. chr1 147131065 . A . . LowGQX END=147131165 GT ./. chr1 147131509 . A . . LowGQX END=147131644 GT ./. chr1 147131760 . A . . LowGQX END=147131893 GT ./. chr1 147141950 . A . . LowGQX END=147142173 GT ./. chr1 147230219 . C . . LowGQX END=147231398 GT ./. chr1 147380032 . T . . LowGQX END=147381436 GT ./. chr1 147400621 . G . . LowGQX END=147400721 GT ./. chr1 147408721 . C . . LowGQX END=147408821 GT ./. chr1 147410775 . G . . LowGQX END=147410934 GT ./. chr1 147415550 . A . . LowGQX END=147415661 GT ./. chr1 147416048 . A . . LowGQX END=147416269 GT ./. chr1 147425525 . G . . LowGQX END=147425700 GT ./. chr1 147426491 . C . . LowGQX END=147426645 GT ./. chr1 147438784 . A . . LowGQX END=147438943 GT ./. chr1 147441044 . T . . LowGQX END=147441202 GT ./. chr1 147442036 . A . . LowGQX END=147442196 GT ./. chr1 147458378 . A . . LowGQX END=147458529 GT ./. chr1 147460601 . G . . LowGQX END=147460759 GT ./. chr1 147464732 . A . . LowGQX END=147465152 GT ./. chr1 147575934 . A . . LowGQX END=147576204 GT ./. chr1 147576818 . A . . LowGQX END=147576977 GT ./. chr1 147577630 . G . . LowGQX END=147577814 GT ./. chr1 147578382 . A . . LowGQX END=147578542 GT ./. chr1 147579214 . G . . LowGQX END=147579402 GT ./. chr1 147579912 . A . . LowGQX END=147580072 GT ./. chr1 147580765 . A . . LowGQX END=147580962 GT ./. chr1 147581487 . A . . LowGQX END=147581647 GT ./. chr1 147582642 . C . . LowGQX END=147582831 GT ./. chr1 147586640 . T . . LowGQX END=147586800 GT ./. chr1 147588003 . A . . LowGQX END=147588353 GT ./. chr1 147588673 . C . . LowGQX END=147588833 GT ./. chr1 147589782 . T . . LowGQX END=147590132 GT ./. chr1 147590901 . A . . LowGQX END=147591060 GT ./. chr1 147592711 . G . . LowGQX END=147593061 GT ./. chr1 147594265 . A . . LowGQX END=147594615 GT ./. chr1 147594939 . C . . LowGQX END=147595099 GT ./. chr1 147596063 . T . . LowGQX END=147596413 GT ./. chr1 147597130 . T . . LowGQX END=147597285 GT ./. chr1 147599039 . A . . LowGQX END=147599389 GT ./. chr1 147607950 . C . . LowGQX END=147608119 GT ./. chr1 147954837 . C . . LowGQX END=147955347 GT ./. chr1 148004546 . G . . LowGQX END=148004801 GT ./. chr1 148005401 . A . . LowGQX END=148005560 GT ./. chr1 148006213 . G . . LowGQX END=148006401 GT ./. chr1 148006955 . A . . LowGQX END=148007115 GT ./. chr1 148007787 . G . . LowGQX END=148007975 GT ./. chr1 148008549 . G . . LowGQX END=148008649 GT ./. chr1 148009326 . T . . LowGQX END=148009519 GT ./. chr1 148010089 . G . . LowGQX END=148010189 GT ./. chr1 148010882 . A . . LowGQX END=148011059 GT ./. chr1 148011678 . A . . LowGQX END=148011837 GT ./. chr1 148012490 . G . . LowGQX END=148012678 GT ./. chr1 148013236 . A . . LowGQX END=148013396 GT ./. chr1 148014068 . G . . LowGQX END=148014256 GT ./. chr1 148014770 . A . . LowGQX END=148014930 GT ./. chr1 148015623 . A . . LowGQX END=148015822 GT ./. chr1 148016385 . C . . LowGQX END=148016485 GT ./. chr1 148017479 . C . . LowGQX END=148017668 GT ./. chr1 148021493 . T . . LowGQX END=148021653 GT ./. chr1 148022854 . A . . LowGQX END=148023204 GT ./. chr1 148023524 . C . . LowGQX END=148023684 GT ./. chr1 148024638 . T . . LowGQX END=148024988 GT ./. chr1 148025759 . A . . LowGQX END=148025864 GT ./. chr1 148201966 . A . . LowGQX END=148202465 GT ./. chr1 148251874 . T . . LowGQX END=148252119 GT ./. chr1 148252674 . T . . LowGQX END=148252839 GT ./. chr1 148253552 . C . . LowGQX END=148253751 GT ./. chr1 148254296 . A . . LowGQX END=148254456 GT ./. chr1 148255140 . C . . LowGQX END=148255339 GT ./. chr1 148255838 . A . . LowGQX END=148255998 GT ./. chr1 148256665 . C . . LowGQX END=148256866 GT ./. chr1 148257442 . T . . LowGQX END=148257603 GT ./. chr1 148258316 . C . . LowGQX END=148258515 GT ./. chr1 148259060 . A . . LowGQX END=148259220 GT ./. chr1 148259904 . C . . LowGQX END=148260103 GT ./. chr1 148260602 . A . . LowGQX END=148260762 GT ./. chr1 148261456 . C . . LowGQX END=148261655 GT ./. chr1 148262257 . C . . LowGQX END=148262367 GT ./. chr1 148263059 . A . . LowGQX END=148263254 GT ./. chr1 148263820 . A . . LowGQX END=148263980 GT ./. chr1 148264664 . C . . LowGQX END=148264863 GT ./. chr1 148265362 . A . . LowGQX END=148265522 GT ./. chr1 148266189 . C . . LowGQX END=148266390 GT ./. chr1 148266966 . T . . LowGQX END=148267127 GT ./. chr1 148267840 . C . . LowGQX END=148268039 GT ./. chr1 148268592 . A . . LowGQX END=148268752 GT ./. chr1 148269436 . C . . LowGQX END=148269635 GT ./. chr1 148270134 . A . . LowGQX END=148270294 GT ./. chr1 148270961 . C . . LowGQX END=148271162 GT ./. chr1 148271740 . T . . LowGQX END=148271901 GT ./. chr1 148272614 . C . . LowGQX END=148272813 GT ./. chr1 148273364 . A . . LowGQX END=148273524 GT ./. chr1 148274208 . C . . LowGQX END=148274407 GT ./. chr1 148274898 . A . . LowGQX END=148275058 GT ./. chr1 148275752 . C . . LowGQX END=148275951 GT ./. chr1 148276504 . T . . LowGQX END=148276665 GT ./. chr1 148277378 . C . . LowGQX END=148277577 GT ./. chr1 148278126 . A . . LowGQX END=148278286 GT ./. chr1 148278970 . C . . LowGQX END=148279169 GT ./. chr1 148279695 . T . . LowGQX END=148279856 GT ./. chr1 148280569 . C . . LowGQX END=148280768 GT ./. chr1 148281319 . A . . LowGQX END=148281479 GT ./. chr1 148282163 . C . . LowGQX END=148282362 GT ./. chr1 148282888 . T . . LowGQX END=148283049 GT ./. chr1 148283762 . C . . LowGQX END=148283961 GT ./. chr1 148284512 . A . . LowGQX END=148284672 GT ./. chr1 148285356 . C . . LowGQX END=148285555 GT ./. chr1 148286081 . T . . LowGQX END=148286242 GT ./. chr1 148286934 . A . . LowGQX END=148287129 GT ./. chr1 148287705 . A . . LowGQX END=148287865 GT ./. chr1 148288549 . C . . LowGQX END=148288748 GT ./. chr1 148289247 . A . . LowGQX END=148289407 GT ./. chr1 148290101 . C . . LowGQX END=148290300 GT ./. chr1 148290851 . T . . LowGQX END=148291012 GT ./. chr1 148291704 . A . . LowGQX END=148291899 GT ./. chr1 148292475 . A . . LowGQX END=148292635 GT ./. chr1 148293319 . C . . LowGQX END=148293518 GT ./. chr1 148294017 . A . . LowGQX END=148294177 GT ./. chr1 148294871 . C . . LowGQX END=148295070 GT ./. chr1 148295621 . T . . LowGQX END=148295782 GT ./. chr1 148296474 . A . . LowGQX END=148296669 GT ./. chr1 148297245 . A . . LowGQX END=148297405 GT ./. chr1 148298089 . C . . LowGQX END=148298288 GT ./. chr1 148298787 . A . . LowGQX END=148298947 GT ./. chr1 148299641 . C . . LowGQX END=148299840 GT ./. chr1 148300391 . T . . LowGQX END=148300552 GT ./. chr1 148301244 . A . . LowGQX END=148301439 GT ./. chr1 148302005 . A . . LowGQX END=148302165 GT ./. chr1 148302849 . C . . LowGQX END=148303048 GT ./. chr1 148303547 . A . . LowGQX END=148303707 GT ./. chr1 148304401 . C . . LowGQX END=148304600 GT ./. chr1 148305151 . T . . LowGQX END=148305312 GT ./. chr1 148306004 . A . . LowGQX END=148306199 GT ./. chr1 148306775 . A . . LowGQX END=148306935 GT ./. chr1 148307619 . C . . LowGQX END=148307818 GT ./. chr1 148308321 . A . . LowGQX END=148308481 GT ./. chr1 148309175 . C . . LowGQX END=148309374 GT ./. chr1 148309925 . T . . LowGQX END=148310086 GT ./. chr1 148310778 . A . . LowGQX END=148310973 GT ./. chr1 148311541 . A . . LowGQX END=148311701 GT ./. chr1 148312385 . C . . LowGQX END=148312584 GT ./. chr1 148313083 . A . . LowGQX END=148313243 GT ./. chr1 148313937 . C . . LowGQX END=148314136 GT ./. chr1 148314687 . T . . LowGQX END=148314848 GT ./. chr1 148315561 . C . . LowGQX END=148315760 GT ./. chr1 148316309 . A . . LowGQX END=148316469 GT ./. chr1 148317153 . C . . LowGQX END=148317352 GT ./. chr1 148317855 . A . . LowGQX END=148318015 GT ./. chr1 148318709 . C . . LowGQX END=148318908 GT ./. chr1 148319459 . T . . LowGQX END=148319620 GT ./. chr1 148320312 . A . . LowGQX END=148320507 GT ./. chr1 148321061 . A . . LowGQX END=148321221 GT ./. chr1 148321905 . C . . LowGQX END=148322104 GT ./. chr1 148322603 . A . . LowGQX END=148322763 GT ./. chr1 148323457 . C . . LowGQX END=148323656 GT ./. chr1 148324207 . T . . LowGQX END=148324368 GT ./. chr1 148325081 . C . . LowGQX END=148325280 GT ./. chr1 148325831 . A . . LowGQX END=148325991 GT ./. chr1 148326675 . C . . LowGQX END=148326874 GT ./. chr1 148327365 . A . . LowGQX END=148327525 GT ./. chr1 148328219 . C . . LowGQX END=148328418 GT ./. chr1 148328946 . A . . LowGQX END=148329106 GT ./. chr1 148330062 . G . . LowGQX END=148330288 GT ./. chr1 148334111 . T . . LowGQX END=148334271 GT ./. chr1 148335463 . T . . LowGQX END=148335803 GT ./. chr1 148336131 . C . . LowGQX END=148336291 GT ./. chr1 148337246 . G . . LowGQX END=148337596 GT ./. chr1 148338315 . T . . LowGQX END=148338470 GT ./. chr1 148340166 . A . . LowGQX END=148340516 GT ./. chr1 148341794 . C . . LowGQX END=148342007 GT ./. chr1 148342456 . G . . LowGQX END=148342556 GT ./. chr1 148343593 . C . . LowGQX END=148343809 GT ./. chr1 148344639 . C . . LowGQX END=148344743 GT ./. chr1 148346581 . C . . LowGQX END=148346757 GT ./. chr1 148577637 . C . . LowGQX END=148577827 GT ./. chr1 148579553 . C . . LowGQX END=148579711 GT ./. chr1 148580467 . A . . LowGQX END=148580817 GT ./. chr1 148581723 . T . . LowGQX END=148581883 GT ./. chr1 148582260 . C . . LowGQX END=148582610 GT ./. chr1 148583742 . C . . LowGQX END=148583902 GT ./. chr1 148587745 . T . . LowGQX END=148587954 GT ./. chr1 148588910 . T . . LowGQX END=148589070 GT ./. chr1 148589648 . C . . LowGQX END=148589836 GT ./. chr1 148590469 . C . . LowGQX END=148590629 GT ./. chr1 148591188 . C . . LowGQX END=148591376 GT ./. chr1 148591999 . C . . LowGQX END=148592159 GT ./. chr1 148592778 . C . . LowGQX END=148592966 GT ./. chr1 148593625 . T . . LowGQX END=148593786 GT ./. chr1 148594395 . A . . LowGQX END=148594643 GT ./. chr1 148644074 . G . . LowGQX END=148644581 GT ./. chr1 148739722 . C . . LowGQX END=148739912 GT ./. chr1 148741637 . C . . LowGQX END=148741795 GT ./. chr1 148742554 . A . . LowGQX END=148742904 GT ./. chr1 148743810 . T . . LowGQX END=148743970 GT ./. chr1 148744347 . C . . LowGQX END=148744697 GT ./. chr1 148745829 . C . . LowGQX END=148745989 GT ./. chr1 148749789 . T . . LowGQX END=148749998 GT ./. chr1 148750954 . T . . LowGQX END=148751114 GT ./. chr1 148751696 . C . . LowGQX END=148751884 GT ./. chr1 148752517 . C . . LowGQX END=148752677 GT ./. chr1 148753176 . C . . LowGQX END=148753424 GT ./. chr1 148754047 . C . . LowGQX END=148754207 GT ./. chr1 148754822 . C . . LowGQX END=148755010 GT ./. chr1 148755669 . T . . LowGQX END=148755830 GT ./. chr1 148756368 . T . . LowGQX END=148756748 GT ./. chr1 148806078 . G . . LowGQX END=148806585 GT ./. chr1 149398788 . C . . LowGQX END=149399180 GT ./. chr1 149400131 . C . . LowGQX END=149400543 GT ./. chr1 149450954 . C . . LowGQX END=149451105 GT ./. chr1 149459383 . T . . LowGQX END=149459550 GT ./. chr1 149553066 . G . . LowGQX END=149553576 GT ./. chr1 149676069 . C . . LowGQX END=149676580 GT ./. chr1 149754235 . C . . LowGQX END=149754393 GT ./. chr1 149754646 . T . . LowGQX END=149754853 GT ./. chr1 149755508 . C . . LowGQX END=149755865 GT ./. chr1 149759871 . T . . LowGQX END=149760215 GT ./. chr1 149761559 . G . . LowGQX END=149761946 GT ./. chr1 149762742 . C . . LowGQX END=149763125 GT ./. chr1 149764090 . C . . LowGQX END=149764773 GT ./. chr1 149765478 . T . . LowGQX END=149765644 GT ./. chr1 149783496 . T . . LowGQX END=149783881 GT ./. chr1 149784824 . C . . LowGQX END=149785239 GT ./. chr1 149804236 . G . . LowGQX END=149804566 GT ./. chr1 149812306 . G . . LowGQX END=149812736 GT ./. chr1 149813860 . C . . LowGQX END=149814270 GT ./. chr1 149821759 . T . . LowGQX END=149822348 GT ./. chr1 149822668 . T . . LowGQX END=149823078 GT ./. chr1 149824204 . G . . LowGQX END=149824634 GT ./. chr1 149832373 . C . . LowGQX END=149832703 GT ./. chr1 149857808 . A . . LowGQX END=149858193 GT ./. chr1 149858523 . T . . LowGQX END=149858917 GT ./. chr1 149859072 . A . . LowGQX END=149859469 GT ./. chr1 149871611 . C . . LowGQX END=149872029 GT ./. chr1 149876564 . C . . LowGQX END=149876752 GT ./. chr1 149877427 . A . . LowGQX END=149877594 GT ./. chr1 149878200 . A . . LowGQX END=149878443 GT ./. chr1 149879250 . A . . LowGQX END=149879388 GT ./. chr1 149879592 . A . . LowGQX END=149879761 GT ./. chr1 149880739 . C . . LowGQX END=149880839 GT ./. chr1 149881011 . A . . LowGQX END=149881126 GT ./. chr1 149881348 . C . . LowGQX END=149881448 GT ./. chr1 149882120 . A . . LowGQX END=149882258 GT ./. chr1 149882376 . A . . LowGQX END=149882532 GT ./. chr1 149883350 . A . . LowGQX END=149883535 GT ./. chr1 149884769 . A . . LowGQX END=149885395 GT ./. chr1 149895362 . C . . LowGQX END=149895624 GT ./. chr1 149895720 . A . . LowGQX END=149895961 GT ./. chr1 149897546 . T . . LowGQX END=149897945 GT ./. chr1 149898266 . A . . LowGQX END=149898813 GT ./. chr1 149899056 . A . . LowGQX END=149899189 GT ./. chr1 149899585 . T . . LowGQX END=149899685 GT ./. chr1 149900727 . G . . LowGQX END=149900827 GT ./. chr1 149901020 . T . . LowGQX END=149901212 GT ./. chr1 149901513 . A . . LowGQX END=149901811 GT ./. chr1 149902255 . A . . LowGQX END=149902442 GT ./. chr1 149902682 . A . . LowGQX END=149902860 GT ./. chr1 149903120 . A . . LowGQX END=149903321 GT ./. chr1 149903822 . A . . LowGQX END=149903922 GT ./. chr1 149904140 . A . . LowGQX END=149904240 GT ./. chr1 149905297 . A . . LowGQX END=149905426 GT ./. chr1 149905498 . C . . LowGQX END=149905598 GT ./. chr1 149905742 . A . . LowGQX END=149905842 GT ./. chr1 149906082 . A . . LowGQX END=149906222 GT ./. chr1 149906331 . T . . LowGQX END=149906431 GT ./. chr1 149906877 . A . . LowGQX END=149907024 GT ./. chr1 149907173 . A . . LowGQX END=149907273 GT ./. chr1 149907475 . A . . LowGQX END=149907599 GT ./. chr1 149908034 . A . . LowGQX END=149908134 GT ./. chr1 149908398 . T . . LowGQX END=149908614 GT ./. chr1 149915754 . G . . LowGQX END=149916967 GT ./. chr1 149919145 . T . . LowGQX END=149919245 GT ./. chr1 149920869 . A . . LowGQX END=149920988 GT ./. chr1 149921530 . A . . LowGQX END=149921684 GT ./. chr1 149921995 . A . . LowGQX END=149922127 GT ./. chr1 149931601 . A . . LowGQX END=149931718 GT ./. chr1 149936111 . T . . LowGQX END=149936277 GT ./. chr1 149937700 . A . . LowGQX END=149937806 GT ./. chr1 149939217 . A . . LowGQX END=149939449 GT ./. chr1 149942989 . A . . LowGQX END=149943182 GT ./. chr1 149949354 . T . . LowGQX END=149949454 GT ./. chr1 150039912 . G . . LowGQX END=150040012 GT ./. chr1 150040685 . A . . LowGQX END=150040824 GT ./. chr1 150044214 . C . . LowGQX END=150044314 GT ./. chr1 150048301 . T . . LowGQX END=150048401 GT ./. chr1 150048979 . G . . LowGQX END=150049079 GT ./. chr1 150049170 . A . . LowGQX END=150049312 GT ./. chr1 150049711 . A . . LowGQX END=150049901 GT ./. chr1 150053391 . A . . LowGQX END=150053602 GT ./. chr1 150053964 . A . . LowGQX END=150054082 GT ./. chr1 150054798 . A . . LowGQX END=150054970 GT ./. chr1 150064029 . A . . LowGQX END=150064192 GT ./. chr1 150064394 . A . . LowGQX END=150064506 GT ./. chr1 150065621 . A . . LowGQX END=150065747 GT ./. chr1 150070911 . C . . LowGQX END=150071011 GT ./. chr1 150082609 . A . . LowGQX END=150082745 GT ./. chr1 150114953 . C . . LowGQX END=150115113 GT ./. chr1 150116885 . A . . LowGQX END=150117100 GT ./. chr1 150122353 . C . . LowGQX END=150122513 GT ./. chr1 150123100 . A . . LowGQX END=150123251 GT ./. chr1 150128258 . A . . LowGQX END=150128403 GT ./. chr1 150129103 . A . . LowGQX END=150129212 GT ./. chr1 150129516 . G . . LowGQX END=150129683 GT ./. chr1 150131012 . A . . LowGQX END=150131721 GT ./. chr1 150192979 . G . . LowGQX END=150193079 GT ./. chr1 150195510 . A . . LowGQX END=150195621 GT ./. chr1 150198928 . G . . LowGQX END=150199130 GT ./. chr1 150201373 . A . . LowGQX END=150201573 GT ./. chr1 150202904 . A . . LowGQX END=150203031 GT ./. chr1 150204113 . A . . LowGQX END=150204303 GT ./. chr1 150208058 . C . . LowGQX END=150208158 GT ./. chr1 150230502 . C . . LowGQX END=150230602 GT ./. chr1 150232524 . C . . LowGQX END=150232731 GT ./. chr1 150233856 . A . . LowGQX END=150234040 GT ./. chr1 150234524 . T . . LowGQX END=150234702 GT ./. chr1 150234922 . A . . LowGQX END=150235022 GT ./. chr1 150235187 . T . . LowGQX END=150235287 GT ./. chr1 150235439 . A . . LowGQX END=150235601 GT ./. chr1 150235696 . A . . LowGQX END=150235821 GT ./. chr1 150236019 . G . . LowGQX END=150236119 GT ./. chr1 150236186 . C . . LowGQX END=150236286 GT ./. chr1 150236977 . C . . LowGQX END=150237077 GT ./. chr1 150238513 . G . . LowGQX END=150238613 GT ./. chr1 150238920 . A . . LowGQX END=150239059 GT ./. chr1 150239473 . A . . LowGQX END=150239605 GT ./. chr1 150239754 . A . . LowGQX END=150239881 GT ./. chr1 150240103 . T . . LowGQX END=150240203 GT ./. chr1 150240355 . A . . LowGQX END=150240530 GT ./. chr1 150241096 . A . . LowGQX END=150241213 GT ./. chr1 150245194 . T . . LowGQX END=150245294 GT ./. chr1 150246482 . C . . LowGQX END=150246582 GT ./. chr1 150248130 . A . . LowGQX END=150248230 GT ./. chr1 150248928 . A . . LowGQX END=150249043 GT ./. chr1 150252051 . C . . LowGQX END=150252152 GT ./. chr1 150253229 . T . . LowGQX END=150253329 GT ./. chr1 150255676 . C . . LowGQX END=150256046 GT ./. chr1 150256143 . G . . LowGQX END=150256363 GT ./. chr1 150256826 . C . . LowGQX END=150256926 GT ./. chr1 150257005 . A . . LowGQX END=150257121 GT ./. chr1 150258840 . A . . LowGQX END=150259369 GT ./. chr1 150266779 . C . . LowGQX END=150266879 GT ./. chr1 150273647 . G . . LowGQX END=150273806 GT ./. chr1 150276277 . A . . LowGQX END=150276377 GT ./. chr1 150276520 . C . . LowGQX END=150276626 GT ./. chr1 150277042 . G . . LowGQX END=150277183 GT ./. chr1 150277334 . T . . LowGQX END=150277494 GT ./. chr1 150280480 . A . . LowGQX END=150280665 GT ./. chr1 150297350 . T . . LowGQX END=150297597 GT ./. chr1 150298158 . G . . LowGQX END=150298391 GT ./. chr1 150300728 . T . . LowGQX END=150300982 GT ./. chr1 150305104 . G . . LowGQX END=150305290 GT ./. chr1 150305399 . T . . LowGQX END=150305722 GT ./. chr1 150307355 . C . . LowGQX END=150307764 GT ./. chr1 150310585 . G . . LowGQX END=150310854 GT ./. chr1 150312823 . A . . LowGQX END=150313005 GT ./. chr1 150315734 . T . . LowGQX END=150315980 GT ./. chr1 150316587 . C . . LowGQX END=150316789 GT ./. chr1 150316859 . T . . LowGQX END=150317075 GT ./. chr1 150318443 . G . . LowGQX END=150318664 GT ./. chr1 150318833 . T . . LowGQX END=150319019 GT ./. chr1 150321582 . G . . LowGQX END=150321746 GT ./. chr1 150325258 . T . . LowGQX END=150325507 GT ./. chr1 150337190 . G . . LowGQX END=150337396 GT ./. chr1 150390071 . G . . LowGQX END=150390202 GT ./. chr1 150413338 . T . . LowGQX END=150413523 GT ./. chr1 150414346 . A . . LowGQX END=150414446 GT ./. chr1 150415683 . T . . LowGQX END=150415783 GT ./. chr1 150416726 . G . . LowGQX END=150416854 GT ./. chr1 150418701 . G . . LowGQX END=150418878 GT ./. chr1 150429763 . G . . LowGQX END=150430047 GT ./. chr1 150432535 . G . . LowGQX END=150432794 GT ./. chr1 150437002 . G . . LowGQX END=150437204 GT ./. chr1 150443036 . G . . LowGQX END=150445811 GT ./. chr1 150459910 . C . . LowGQX END=150460010 GT ./. chr1 150460332 . A . . LowGQX END=150460533 GT ./. chr1 150461438 . A . . LowGQX END=150461714 GT ./. chr1 150463075 . A . . LowGQX END=150463245 GT ./. chr1 150463868 . A . . LowGQX END=150463990 GT ./. chr1 150464057 . C . . LowGQX END=150464157 GT ./. chr1 150464877 . T . . LowGQX END=150464977 GT ./. chr1 150468956 . A . . LowGQX END=150469107 GT ./. chr1 150469284 . A . . LowGQX END=150469387 GT ./. chr1 150470004 . A . . LowGQX END=150470226 GT ./. chr1 150470976 . A . . LowGQX END=150471196 GT ./. chr1 150471371 . A . . LowGQX END=150471513 GT ./. chr1 150471681 . T . . LowGQX END=150471781 GT ./. chr1 150476809 . A . . LowGQX END=150476914 GT ./. chr1 150477106 . A . . LowGQX END=150477212 GT ./. chr1 150477369 . C . . LowGQX END=150477469 GT ./. chr1 150477995 . A . . LowGQX END=150478184 GT ./. chr1 150479390 . A . . LowGQX END=150479543 GT ./. chr1 150480635 . A . . LowGQX END=150480807 GT ./. chr1 150481956 . G . . LowGQX END=150482290 GT ./. chr1 150482310 . G . . LowGQX END=150482710 GT ./. chr1 150483301 . T . . LowGQX END=150483734 GT ./. chr1 150483882 . G . . LowGQX END=150484359 GT ./. chr1 150484777 . A . . LowGQX END=150485100 GT ./. chr1 150485150 . G . . LowGQX END=150485340 GT ./. chr1 150485662 . C . . LowGQX END=150485995 GT ./. chr1 150522693 . T . . LowGQX END=150522793 GT ./. chr1 150523090 . G . . LowGQX END=150523537 GT ./. chr1 150524705 . C . . LowGQX END=150524836 GT ./. chr1 150524968 . C . . LowGQX END=150525128 GT ./. chr1 150525323 . G . . LowGQX END=150525781 GT ./. chr1 150525851 . A . . LowGQX END=150526650 GT ./. chr1 150526790 . C . . LowGQX END=150526995 GT ./. chr1 150527026 . C . . LowGQX END=150527126 GT ./. chr1 150527854 . C . . LowGQX END=150528093 GT ./. chr1 150528587 . T . . LowGQX END=150528894 GT ./. chr1 150529046 . G . . LowGQX END=150529321 GT ./. chr1 150529364 . G . . LowGQX END=150529863 GT ./. chr1 150529919 . G . . LowGQX END=150530151 GT ./. chr1 150530370 . A . . LowGQX END=150530677 GT ./. chr1 150530898 . G . . LowGQX END=150531252 GT ./. chr1 150531387 . T . . LowGQX END=150531693 GT ./. chr1 150531712 . G . . LowGQX END=150531994 GT ./. chr1 150532186 . G . . LowGQX END=150532433 GT ./. chr1 150532485 . C . . LowGQX END=150532724 GT ./. chr1 150533556 . A . . LowGQX END=150533947 GT ./. chr1 150549838 . A . . LowGQX END=150549970 GT ./. chr1 150550718 . A . . LowGQX END=150550970 GT ./. chr1 150551317 . A . . LowGQX END=150552011 GT ./. chr1 150573568 . C . . LowGQX END=150573756 GT ./. chr1 150595278 . G . . LowGQX END=150595378 GT ./. chr1 150598108 . C . . LowGQX END=150598287 GT ./. chr1 150598929 . A . . LowGQX END=150599029 GT ./. chr1 150599806 . T . . LowGQX END=150600071 GT ./. chr1 150601510 . C . . LowGQX END=150601610 GT ./. chr1 150601869 . C . . LowGQX END=150601969 GT ./. chr1 150620795 . C . . LowGQX END=150621227 GT ./. chr1 150634288 . A . . LowGQX END=150634407 GT ./. chr1 150636106 . A . . LowGQX END=150636242 GT ./. chr1 150666507 . T . . LowGQX END=150666667 GT ./. chr1 150667130 . A . . LowGQX END=150667317 GT ./. chr1 150671121 . A . . LowGQX END=150671221 GT ./. chr1 150672574 . A . . LowGQX END=150672674 GT ./. chr1 150675724 . A . . LowGQX END=150675878 GT ./. chr1 150676583 . C . . LowGQX END=150676837 GT ./. chr1 150679027 . A . . LowGQX END=150679288 GT ./. chr1 150680730 . A . . LowGQX END=150680886 GT ./. chr1 150681364 . C . . LowGQX END=150681464 GT ./. chr1 150683985 . G . . LowGQX END=150684085 GT ./. chr1 150684270 . C . . LowGQX END=150684370 GT ./. chr1 150686330 . A . . LowGQX END=150686430 GT ./. chr1 150686479 . T . . LowGQX END=150686630 GT ./. chr1 150687073 . A . . LowGQX END=150687173 GT ./. chr1 150689612 . A . . LowGQX END=150689761 GT ./. chr1 150691857 . G . . LowGQX END=150692016 GT ./. chr1 150705520 . C . . LowGQX END=150705624 GT ./. chr1 150720251 . A . . LowGQX END=150720358 GT ./. chr1 150722480 . A . . LowGQX END=150722650 GT ./. chr1 150724255 . A . . LowGQX END=150724487 GT ./. chr1 150727475 . A . . LowGQX END=150727629 GT ./. chr1 150730332 . A . . LowGQX END=150730459 GT ./. chr1 150737112 . A . . LowGQX END=150737242 GT ./. chr1 150769224 . T . . LowGQX END=150769426 GT ./. chr1 150771593 . T . . LowGQX END=150771801 GT ./. chr1 150771969 . T . . LowGQX END=150772237 GT ./. chr1 150776446 . C . . LowGQX END=150776767 GT ./. chr1 150778286 . G . . LowGQX END=150778752 GT ./. chr1 150779111 . A . . LowGQX END=150779333 GT ./. chr1 150779725 . A . . LowGQX END=150779901 GT ./. chr1 150784492 . T . . LowGQX END=150784592 GT ./. chr1 150785646 . A . . LowGQX END=150785817 GT ./. chr1 150786551 . A . . LowGQX END=150786718 GT ./. chr1 150788673 . C . . LowGQX END=150788932 GT ./. chr1 150789262 . A . . LowGQX END=150789422 GT ./. chr1 150789556 . A . . LowGQX END=150789681 GT ./. chr1 150789830 . A . . LowGQX END=150789930 GT ./. chr1 150790394 . A . . LowGQX END=150790509 GT ./. chr1 150795668 . A . . LowGQX END=150795824 GT ./. chr1 150799007 . G . . LowGQX END=150799107 GT ./. chr1 150801567 . A . . LowGQX END=150801706 GT ./. chr1 150801967 . A . . LowGQX END=150802067 GT ./. chr1 150802369 . T . . LowGQX END=150802469 GT ./. chr1 150804227 . A . . LowGQX END=150804442 GT ./. chr1 150804793 . A . . LowGQX END=150804893 GT ./. chr1 150807012 . A . . LowGQX END=150807119 GT ./. chr1 150808754 . A . . LowGQX END=150808972 GT ./. chr1 150811915 . A . . LowGQX END=150812133 GT ./. chr1 150814873 . T . . LowGQX END=150814973 GT ./. chr1 150818712 . A . . LowGQX END=150818812 GT ./. chr1 150825227 . C . . LowGQX END=150825327 GT ./. chr1 150825691 . A . . LowGQX END=150825791 GT ./. chr1 150830823 . A . . LowGQX END=150830939 GT ./. chr1 150833701 . A . . LowGQX END=150833801 GT ./. chr1 150848922 . T . . LowGQX END=150849082 GT ./. chr1 150899164 . G . . LowGQX END=150899320 GT ./. chr1 150900180 . A . . LowGQX END=150900453 GT ./. chr1 150902441 . A . . LowGQX END=150902597 GT ./. chr1 150912384 . C . . LowGQX END=150912484 GT ./. chr1 150913803 . A . . LowGQX END=150913907 GT ./. chr1 150915037 . A . . LowGQX END=150915167 GT ./. chr1 150915326 . A . . LowGQX END=150915532 GT ./. chr1 150916394 . A . . LowGQX END=150916496 GT ./. chr1 150917392 . A . . LowGQX END=150917639 GT ./. chr1 150919360 . A . . LowGQX END=150919491 GT ./. chr1 150921596 . A . . LowGQX END=150921757 GT ./. chr1 150921843 . A . . LowGQX END=150922004 GT ./. chr1 150922932 . A . . LowGQX END=150923569 GT ./. chr1 150923839 . A . . LowGQX END=150923960 GT ./. chr1 150931652 . A . . LowGQX END=150931852 GT ./. chr1 150933037 . A . . LowGQX END=150933679 GT ./. chr1 150934571 . T . . LowGQX END=150934671 GT ./. chr1 150935061 . A . . LowGQX END=150935198 GT ./. chr1 150935448 . A . . LowGQX END=150935618 GT ./. chr1 150936004 . A . . LowGQX END=150936328 GT ./. chr1 150936466 . T . . LowGQX END=150936566 GT ./. chr1 150936722 . G . . LowGQX END=150936843 GT ./. chr1 150936867 . T . . LowGQX END=150936967 GT ./. chr1 150938571 . G . . LowGQX END=150938812 GT ./. chr1 150938950 . A . . LowGQX END=150939108 GT ./. chr1 150939230 . A . . LowGQX END=150939341 GT ./. chr1 150939543 . G . . LowGQX END=150939681 GT ./. chr1 150939865 . C . . LowGQX END=150939965 GT ./. chr1 150940116 . C . . LowGQX END=150940216 GT ./. chr1 150940275 . C . . LowGQX END=150940375 GT ./. chr1 150940557 . A . . LowGQX END=150940680 GT ./. chr1 150940869 . A . . LowGQX END=150940991 GT ./. chr1 150941392 . A . . LowGQX END=150941569 GT ./. chr1 150944305 . A . . LowGQX END=150944405 GT ./. chr1 150955570 . A . . LowGQX END=150955670 GT ./. chr1 150955812 . A . . LowGQX END=150955913 GT ./. chr1 150956389 . G . . LowGQX END=150956549 GT ./. chr1 150956755 . A . . LowGQX END=150956873 GT ./. chr1 150957058 . G . . LowGQX END=150957158 GT ./. chr1 150958802 . C . . LowGQX END=150958902 GT ./. chr1 150959006 . G . . LowGQX END=150959158 GT ./. chr1 150960341 . C . . LowGQX END=150960441 GT ./. chr1 150960565 . A . . LowGQX END=150960665 GT ./. chr1 150960739 . C . . LowGQX END=150960839 GT ./. chr1 150967051 . A . . LowGQX END=150967178 GT ./. chr1 150967718 . G . . LowGQX END=150967818 GT ./. chr1 150969754 . G . . LowGQX END=150969854 GT ./. chr1 150969920 . G . . LowGQX END=150970258 GT ./. chr1 150970556 . A . . LowGQX END=150970752 GT ./. chr1 150971843 . A . . LowGQX END=150971990 GT ./. chr1 150972336 . A . . LowGQX END=150972443 GT ./. chr1 150972931 . A . . LowGQX END=150973094 GT ./. chr1 150973709 . C . . LowGQX END=150973809 GT ./. chr1 150974129 . G . . LowGQX END=150974280 GT ./. chr1 150974639 . A . . LowGQX END=150975183 GT ./. chr1 150978554 . C . . LowGQX END=150978654 GT ./. chr1 150981079 . C . . LowGQX END=150981179 GT ./. chr1 150981278 . C . . LowGQX END=150981378 GT ./. chr1 150990285 . C . . LowGQX END=150990385 GT ./. chr1 150990788 . C . . LowGQX END=150990888 GT ./. chr1 150990941 . A . . LowGQX END=150991148 GT ./. chr1 150997084 . C . . LowGQX END=150997274 GT ./. chr1 150997989 . A . . LowGQX END=150998152 GT ./. chr1 150999707 . A . . LowGQX END=150999807 GT ./. chr1 151001260 . A . . LowGQX END=151001423 GT ./. chr1 151006280 . A . . LowGQX END=151006713 GT ./. chr1 151009173 . T . . LowGQX END=151009273 GT ./. chr1 151010041 . A . . LowGQX END=151010141 GT ./. chr1 151010963 . A . . LowGQX END=151011063 GT ./. chr1 151011270 . A . . LowGQX END=151011505 GT ./. chr1 151015430 . A . . LowGQX END=151015660 GT ./. chr1 151015806 . A . . LowGQX END=151015913 GT ./. chr1 151016070 . A . . LowGQX END=151016206 GT ./. chr1 151017310 . T . . LowGQX END=151017410 GT ./. chr1 151018267 . T . . LowGQX END=151018367 GT ./. chr1 151018541 . A . . LowGQX END=151018644 GT ./. chr1 151019096 . C . . LowGQX END=151019196 GT ./. chr1 151020322 . C . . LowGQX END=151021344 GT ./. chr1 151022875 . T . . LowGQX END=151022975 GT ./. chr1 151026711 . C . . LowGQX END=151026811 GT ./. chr1 151027490 . A . . LowGQX END=151027605 GT ./. chr1 151028130 . G . . LowGQX END=151028230 GT ./. chr1 151039699 . C . . LowGQX END=151039976 GT ./. chr1 151060664 . A . . LowGQX END=151060776 GT ./. chr1 151060920 . A . . LowGQX END=151061020 GT ./. chr1 151062880 . A . . LowGQX END=151063052 GT ./. chr1 151065666 . A . . LowGQX END=151065865 GT ./. chr1 151070326 . A . . LowGQX END=151070365;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 151070366 . A . . LowGQX . GT ./. chr1 151070367 . G . . LowGQX END=151070411;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 151070412 . T . . LowGQX END=151070414 GT ./. chr1 151070415 . A . . LowGQX END=151070422;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 151070423 . T . . LowGQX . GT ./. chr1 151070424 . G . . LowGQX END=151070433;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 151070434 . A . . LowGQX . GT ./. chr1 151070435 . C . . LowGQX END=151070445;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 151070446 . T . . LowGQX . GT ./. chr1 151070447 . T . . LowGQX END=151070449;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 151070450 . T . . LowGQX END=151070451 GT ./. chr1 151070452 . C . . LowGQX END=151070479;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 151070480 . T . . LowGQX . GT ./. chr1 151070481 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 151076036 . A . . LowGQX END=151076154 GT ./. chr1 151079511 . A . . LowGQX END=151079701 GT ./. chr1 151089866 . A . . LowGQX END=151089995 GT ./. chr1 151090431 . A . . LowGQX END=151090735 GT ./. chr1 151104661 . C . . LowGQX END=151105996 GT ./. chr1 151106374 . G . . LowGQX END=151106534 GT ./. chr1 151106850 . A . . LowGQX END=151106950 GT ./. chr1 151107074 . A . . LowGQX END=151107174 GT ./. chr1 151107263 . C . . LowGQX END=151107363 GT ./. chr1 151107637 . A . . LowGQX END=151107788 GT ./. chr1 151108065 . A . . LowGQX END=151108243 GT ./. chr1 151108485 . A . . LowGQX END=151108642 GT ./. chr1 151108922 . A . . LowGQX END=151109058 GT ./. chr1 151109331 . A . . LowGQX END=151109553 GT ./. chr1 151110182 . C . . LowGQX END=151110282 GT ./. chr1 151110460 . A . . LowGQX END=151110584 GT ./. chr1 151110788 . A . . LowGQX END=151110888 GT ./. chr1 151111104 . A . . LowGQX END=151111210 GT ./. chr1 151111880 . C . . LowGQX END=151111980 GT ./. chr1 151112096 . T . . LowGQX END=151112196 GT ./. chr1 151112450 . A . . LowGQX END=151112569 GT ./. chr1 151114917 . C . . LowGQX END=151115100 GT ./. chr1 151131172 . C . . LowGQX END=151131731 GT ./. chr1 151133356 . C . . LowGQX END=151133499 GT ./. chr1 151134200 . T . . LowGQX END=151134580 GT ./. chr1 151137553 . A . . LowGQX END=151137737 GT ./. chr1 151138191 . G . . LowGQX END=151138291 GT ./. chr1 151138605 . T . . LowGQX END=151138705 GT ./. chr1 151138933 . C . . LowGQX END=151139033 GT ./. chr1 151139405 . C . . LowGQX END=151139505 GT ./. chr1 151139595 . A . . LowGQX END=151139697 GT ./. chr1 151139800 . A . . LowGQX END=151139982 GT ./. chr1 151140618 . A . . LowGQX END=151140817 GT ./. chr1 151141460 . A . . LowGQX END=151141514;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 151141515 . A . . LowGQX END=151141564 GT ./. chr1 151142519 . A . . LowGQX END=151142619 GT ./. chr1 151142993 . A . . LowGQX END=151143142 GT ./. chr1 151143394 . A . . LowGQX END=151143542 GT ./. chr1 151143907 . A . . LowGQX END=151144019 GT ./. chr1 151144107 . A . . LowGQX END=151144242 GT ./. chr1 151144739 . C . . LowGQX END=151144839 GT ./. chr1 151145973 . A . . LowGQX END=151146094 GT ./. chr1 151146865 . A . . LowGQX END=151147026 GT ./. chr1 151147227 . A . . LowGQX END=151147354 GT ./. chr1 151149118 . C . . LowGQX END=151149541 GT ./. chr1 151150473 . T . . LowGQX END=151150624 GT ./. chr1 151156791 . A . . LowGQX END=151156972 GT ./. chr1 151157980 . A . . LowGQX END=151158099 GT ./. chr1 151158272 . A . . LowGQX END=151158429 GT ./. chr1 151162479 . G . . LowGQX END=151162600 GT ./. chr1 151170494 . A . . LowGQX END=151170594 GT ./. chr1 151171471 . A . . LowGQX END=151171590 GT ./. chr1 151188408 . A . . LowGQX END=151188420 GT ./. chr1 151188421 . C . . LowGQX END=151188508;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 151196689 . C . . LowGQX END=151196789 GT ./. chr1 151196815 . G . . LowGQX END=151196915 GT ./. chr1 151199787 . T . . LowGQX END=151199887 GT ./. chr1 151204145 . A . . LowGQX END=151204280 GT ./. chr1 151204722 . A . . LowGQX END=151204844 GT ./. chr1 151205025 . A . . LowGQX END=151205215 GT ./. chr1 151206671 . A . . LowGQX END=151206975 GT ./. chr1 151209032 . A . . LowGQX END=151209242 GT ./. chr1 151210650 . T . . LowGQX END=151210750 GT ./. chr1 151211581 . T . . LowGQX END=151211681 GT ./. chr1 151212368 . C . . LowGQX END=151212579 GT ./. chr1 151214597 . A . . LowGQX END=151214748 GT ./. chr1 151214912 . A . . LowGQX END=151215046 GT ./. chr1 151219369 . C . . LowGQX END=151219469 GT ./. chr1 151220331 . C . . LowGQX END=151220431 GT ./. chr1 151227162 . A . . LowGQX END=151227322 GT ./. chr1 151234635 . A . . LowGQX END=151234780 GT ./. chr1 151236388 . A . . LowGQX END=151236507 GT ./. chr1 151237302 . T . . LowGQX END=151237402 GT ./. chr1 151237627 . T . . LowGQX END=151237727 GT ./. chr1 151237868 . A . . LowGQX END=151238088 GT ./. chr1 151238478 . A . . LowGQX END=151238630 GT ./. chr1 151238782 . A . . LowGQX END=151238918 GT ./. chr1 151238980 . G . . LowGQX END=151239080 GT ./. chr1 151239386 . C . . LowGQX END=151239486 GT ./. chr1 151239647 . A . . LowGQX END=151239822 GT ./. chr1 151252653 . A . . LowGQX END=151252753 GT ./. chr1 151253967 . C . . LowGQX END=151254136 GT ./. chr1 151254501 . G . . LowGQX END=151254601 GT ./. chr1 151258751 . G . . LowGQX END=151260885 GT ./. chr1 151261002 . A . . LowGQX END=151261185 GT ./. chr1 151261569 . A . . LowGQX END=151261750 GT ./. chr1 151261852 . A . . LowGQX END=151262019 GT ./. chr1 151262152 . A . . LowGQX END=151262486 GT ./. chr1 151262596 . A . . LowGQX END=151262713 GT ./. chr1 151262846 . G . . LowGQX END=151263052 GT ./. chr1 151263171 . T . . LowGQX END=151263688 GT ./. chr1 151265326 . T . . LowGQX END=151265512 GT ./. chr1 151265798 . G . . LowGQX END=151265958 GT ./. chr1 151266426 . T . . LowGQX END=151266617 GT ./. chr1 151266883 . A . . LowGQX END=151267020 GT ./. chr1 151271282 . A . . LowGQX END=151271552 GT ./. chr1 151274318 . A . . LowGQX END=151274446 GT ./. chr1 151274668 . A . . LowGQX END=151274777 GT ./. chr1 151276015 . A . . LowGQX END=151276129 GT ./. chr1 151278610 . A . . LowGQX END=151278842 GT ./. chr1 151280048 . A . . LowGQX END=151280280 GT ./. chr1 151282660 . A . . LowGQX END=151282760 GT ./. chr1 151288047 . A . . LowGQX END=151288988 GT ./. chr1 151298542 . A . . LowGQX END=151298702 GT ./. chr1 151314479 . T . . LowGQX END=151314579 GT ./. chr1 151314611 . A . . LowGQX END=151315706 GT ./. chr1 151315767 . T . . LowGQX END=151315970 GT ./. chr1 151316106 . G . . LowGQX END=151316410 GT ./. chr1 151316622 . G . . LowGQX END=151316806 GT ./. chr1 151316842 . C . . LowGQX END=151317064 GT ./. chr1 151317153 . G . . LowGQX END=151317375 GT ./. chr1 151317531 . C . . LowGQX END=151317716 GT ./. chr1 151318353 . C . . LowGQX END=151318491 GT ./. chr1 151318630 . G . . LowGQX END=151318848 GT ./. chr1 151336978 . T . . LowGQX END=151337184 GT ./. chr1 151337400 . A . . LowGQX END=151337523 GT ./. chr1 151337662 . T . . LowGQX END=151337762 GT ./. chr1 151338037 . A . . LowGQX END=151338163 GT ./. chr1 151338234 . A . . LowGQX END=151338334 GT ./. chr1 151338749 . A . . LowGQX END=151338932 GT ./. chr1 151339196 . A . . LowGQX END=151339383 GT ./. chr1 151340673 . A . . LowGQX END=151340798 GT ./. chr1 151341476 . A . . LowGQX END=151341668 GT ./. chr1 151341916 . A . . LowGQX END=151342033 GT ./. chr1 151342187 . A . . LowGQX END=151342376 GT ./. chr1 151345066 . A . . LowGQX END=151345166 GT ./. chr1 151372062 . A . . LowGQX END=151372242 GT ./. chr1 151372455 . A . . LowGQX END=151372666 GT ./. chr1 151372916 . A . . LowGQX END=151373075 GT ./. chr1 151373231 . T . . LowGQX END=151373331 GT ./. chr1 151373713 . A . . LowGQX END=151373834 GT ./. chr1 151374013 . T . . LowGQX END=151374113 GT ./. chr1 151374250 . C . . LowGQX END=151374350 GT ./. chr1 151377276 . A . . LowGQX END=151378943 GT ./. chr1 151379046 . A . . LowGQX END=151379146 GT ./. chr1 151379385 . A . . LowGQX END=151379502 GT ./. chr1 151379690 . T . . LowGQX END=151379790 GT ./. chr1 151380574 . A . . LowGQX END=151380719 GT ./. chr1 151380863 . G . . LowGQX END=151381093 GT ./. chr1 151381168 . A . . LowGQX END=151381307 GT ./. chr1 151384099 . A . . LowGQX END=151384275 GT ./. chr1 151384770 . A . . LowGQX END=151384875 GT ./. chr1 151395841 . T . . LowGQX END=151396030 GT ./. chr1 151396423 . A . . LowGQX END=151396765 GT ./. chr1 151397429 . A . . LowGQX END=151397540 GT ./. chr1 151400285 . T . . LowGQX END=151400520 GT ./. chr1 151400597 . A . . LowGQX END=151400892 GT ./. chr1 151402077 . A . . LowGQX END=151402190 GT ./. chr1 151403120 . T . . LowGQX END=151403370 GT ./. chr1 151413402 . A . . LowGQX END=151413565 GT ./. chr1 151414555 . A . . LowGQX END=151414683 GT ./. chr1 151490994 . T . . LowGQX END=151491871 GT ./. chr1 151492640 . A . . LowGQX END=151492745 GT ./. chr1 151492875 . C . . LowGQX END=151492975 GT ./. chr1 151493070 . A . . LowGQX END=151493170 GT ./. chr1 151495908 . A . . LowGQX END=151496040 GT ./. chr1 151496700 . A . . LowGQX END=151496837 GT ./. chr1 151497078 . T . . LowGQX END=151497428 GT ./. chr1 151498116 . A . . LowGQX END=151498269 GT ./. chr1 151499449 . A . . LowGQX END=151499586 GT ./. chr1 151501824 . A . . LowGQX END=151502038 GT ./. chr1 151502383 . A . . LowGQX END=151502594 GT ./. chr1 151502952 . C . . LowGQX END=151503232 GT ./. chr1 151504876 . A . . LowGQX END=151505051 GT ./. chr1 151506449 . A . . LowGQX END=151506639 GT ./. chr1 151507513 . C . . LowGQX END=151507613 GT ./. chr1 151508068 . C . . LowGQX END=151508168 GT ./. chr1 151508254 . A . . LowGQX END=151508377 GT ./. chr1 151508711 . A . . LowGQX END=151508824 GT ./. chr1 151509204 . A . . LowGQX END=151509372 GT ./. chr1 151509679 . A . . LowGQX END=151509825 GT ./. chr1 151512823 . T . . LowGQX END=151512923 GT ./. chr1 151518270 . A . . LowGQX END=151518370 GT ./. chr1 151534215 . G . . LowGQX END=151534333 GT ./. chr1 151534555 . T . . LowGQX END=151534655 GT ./. chr1 151535059 . A . . LowGQX END=151535165 GT ./. chr1 151536314 . A . . LowGQX END=151536474 GT ./. chr1 151536996 . C . . LowGQX END=151537096 GT ./. chr1 151538622 . T . . LowGQX END=151538722 GT ./. chr1 151542131 . A . . LowGQX END=151542249 GT ./. chr1 151546744 . A . . LowGQX END=151546877 GT ./. chr1 151547385 . A . . LowGQX END=151547485 GT ./. chr1 151551195 . A . . LowGQX END=151551305 GT ./. chr1 151552117 . C . . LowGQX END=151552217 GT ./. chr1 151553416 . A . . LowGQX END=151553521 GT ./. chr1 151554102 . T . . LowGQX END=151554202 GT ./. chr1 151554555 . G . . LowGQX END=151554717 GT ./. chr1 151584665 . G . . LowGQX END=151584995 GT ./. chr1 151611331 . T . . LowGQX END=151611598 GT ./. chr1 151630709 . A . . LowGQX END=151630906 GT ./. chr1 151633257 . A . . LowGQX END=151633357 GT ./. chr1 151634640 . A . . LowGQX END=151634749 GT ./. chr1 151638399 . T . . LowGQX END=151638499 GT ./. chr1 151640946 . A . . LowGQX END=151641114 GT ./. chr1 151655827 . G . . LowGQX END=151655927 GT ./. chr1 151664909 . A . . LowGQX END=151665063 GT ./. chr1 151665385 . A . . LowGQX END=151665518 GT ./. chr1 151665880 . G . . LowGQX END=151665980 GT ./. chr1 151666024 . G . . LowGQX END=151666124 GT ./. chr1 151666820 . A . . LowGQX END=151666920 GT ./. chr1 151675630 . G . . LowGQX END=151675757 GT ./. chr1 151677515 . C . . LowGQX END=151677647 GT ./. chr1 151678296 . A . . LowGQX END=151678444 GT ./. chr1 151678658 . C . . LowGQX END=151678840 GT ./. chr1 151679068 . C . . LowGQX END=151679228 GT ./. chr1 151679598 . A . . LowGQX END=151679809 GT ./. chr1 151679981 . A . . LowGQX END=151680127 GT ./. chr1 151680266 . A . . LowGQX END=151680414 GT ./. chr1 151681464 . T . . LowGQX END=151681564 GT ./. chr1 151681694 . A . . LowGQX END=151681827 GT ./. chr1 151682194 . C . . LowGQX END=151682294 GT ./. chr1 151682968 . T . . LowGQX END=151683383 GT ./. chr1 151686945 . A . . LowGQX END=151687045 GT ./. chr1 151687062 . G . . LowGQX END=151687162 GT ./. chr1 151688047 . T . . LowGQX END=151688147 GT ./. chr1 151688350 . A . . LowGQX END=151688499 GT ./. chr1 151689203 . C . . LowGQX END=151689303 GT ./. chr1 151692068 . A . . LowGQX END=151692168 GT ./. chr1 151693951 . G . . LowGQX END=151694105 GT ./. chr1 151694550 . C . . LowGQX END=151694650 GT ./. chr1 151699970 . A . . LowGQX END=151700124 GT ./. chr1 151701227 . T . . LowGQX END=151701327 GT ./. chr1 151732524 . A . . LowGQX END=151732704 GT ./. chr1 151733284 . A . . LowGQX END=151733384 GT ./. chr1 151733925 . A . . LowGQX END=151734031 GT ./. chr1 151734557 . A . . LowGQX END=151734657 GT ./. chr1 151734813 . T . . LowGQX END=151734979 GT ./. chr1 151735404 . C . . LowGQX END=151735644 GT ./. chr1 151735801 . A . . LowGQX END=151735958 GT ./. chr1 151739197 . A . . LowGQX END=151739365 GT ./. chr1 151739638 . G . . LowGQX END=151739776 GT ./. chr1 151740533 . G . . LowGQX END=151740710 GT ./. chr1 151742586 . G . . LowGQX END=151742741 GT ./. chr1 151743552 . G . . LowGQX END=151743736 GT ./. chr1 151746905 . C . . LowGQX END=151747005 GT ./. chr1 151747184 . A . . LowGQX END=151747285 GT ./. chr1 151747539 . A . . LowGQX END=151747645 GT ./. chr1 151747866 . A . . LowGQX END=151748022 GT ./. chr1 151748279 . T . . LowGQX END=151748379 GT ./. chr1 151748570 . A . . LowGQX END=151748747 GT ./. chr1 151748913 . A . . LowGQX END=151749078 GT ./. chr1 151751159 . A . . LowGQX END=151751485 GT ./. chr1 151751577 . G . . LowGQX END=151751721 GT ./. chr1 151752425 . A . . LowGQX END=151752619 GT ./. chr1 151753955 . A . . LowGQX END=151754066 GT ./. chr1 151754421 . G . . LowGQX END=151754521 GT ./. chr1 151755373 . A . . LowGQX END=151755543 GT ./. chr1 151773397 . G . . LowGQX END=151775183 GT ./. chr1 151779946 . G . . LowGQX END=151780112 GT ./. chr1 151783799 . A . . LowGQX END=151783913 GT ./. chr1 151785421 . A . . LowGQX END=151785536 GT ./. chr1 151785713 . A . . LowGQX END=151785825 GT ./. chr1 151785962 . A . . LowGQX END=151786099 GT ./. chr1 151787048 . A . . LowGQX END=151787174 GT ./. chr1 151787387 . A . . LowGQX END=151787904 GT ./. chr1 151789107 . G . . LowGQX END=151789284 GT ./. chr1 151789664 . G . . LowGQX END=151789764 GT ./. chr1 151798360 . G . . LowGQX END=151798460 GT ./. chr1 151801813 . G . . LowGQX END=151801970 GT ./. chr1 151803403 . C . . LowGQX END=151803606 GT ./. chr1 151804119 . T . . LowGQX END=151804271 GT ./. chr1 151810403 . G . . LowGQX END=151811475 GT ./. chr1 151819579 . G . . LowGQX END=151819960 GT ./. chr1 151820212 . A . . LowGQX END=151820341 GT ./. chr1 151820656 . A . . LowGQX END=151820771 GT ./. chr1 151823527 . A . . LowGQX END=151823670 GT ./. chr1 151824732 . A . . LowGQX END=151824938 GT ./. chr1 151825917 . A . . LowGQX END=151826044 GT ./. chr1 151847335 . A . . LowGQX END=151847435 GT ./. chr1 151849475 . A . . LowGQX END=151849604 GT ./. chr1 151860747 . A . . LowGQX END=151860862 GT ./. chr1 151861688 . A . . LowGQX END=151861852 GT ./. chr1 151862624 . G . . LowGQX END=151862724 GT ./. chr1 151867416 . T . . LowGQX END=151867676 GT ./. chr1 151881783 . G . . LowGQX END=151881937 GT ./. chr1 151955637 . G . . LowGQX END=151955803 GT ./. chr1 151958573 . A . . LowGQX END=151958709 GT ./. chr1 152005136 . C . . LowGQX END=152005302 GT ./. chr1 152006122 . A . . LowGQX END=152006279 GT ./. chr1 152009341 . T . . LowGQX END=152009441 GT ./. chr1 152057441 . A . . LowGQX END=152060022 GT ./. chr1 152060480 . A . . LowGQX END=152060622 GT ./. chr1 152079859 . A . . LowGQX END=152085557 GT ./. chr1 152086417 . A . . LowGQX END=152086559 GT ./. chr1 152127218 . T . . LowGQX END=152129439 GT ./. chr1 152130226 . A . . LowGQX END=152130368 GT ./. chr1 152185550 . A . . LowGQX END=152193969 GT ./. chr1 152195550 . A . . LowGQX END=152195732 GT ./. chr1 152275125 . G . . LowGQX END=152287275 GT ./. chr1 152287744 . A . . LowGQX END=152287984 GT ./. chr1 152323084 . T . . LowGQX END=152330126 GT ./. chr1 152331221 . A . . LowGQX END=152331363 GT ./. chr1 152382068 . A . . LowGQX END=152383422 GT ./. chr1 152384570 . A . . LowGQX END=152384712 GT ./. chr1 152484009 . A . . LowGQX END=152484370 GT ./. chr1 152487858 . C . . LowGQX END=152488162 GT ./. chr1 152538404 . G . . LowGQX END=152538687 GT ./. chr1 152552132 . G . . LowGQX END=152552415 GT ./. chr1 152573195 . C . . LowGQX END=152573495 GT ./. chr1 152586236 . T . . LowGQX END=152586626 GT ./. chr1 152595308 . G . . LowGQX END=152595582 GT ./. chr1 152636580 . G . . LowGQX END=152636917 GT ./. chr1 152648490 . G . . LowGQX END=152648827 GT ./. chr1 152659318 . G . . LowGQX END=152659655 GT ./. chr1 152671376 . A . . LowGQX END=152671701 GT ./. chr1 152681550 . A . . LowGQX END=152681854 GT ./. chr1 152691997 . A . . LowGQX END=152692751 GT ./. chr1 152732063 . C . . LowGQX END=152733807 GT ./. chr1 152748846 . A . . LowGQX END=152749207 GT ./. chr1 152759774 . A . . LowGQX END=152760135 GT ./. chr1 152770258 . A . . LowGQX END=152770618 GT ./. chr1 152777596 . C . . LowGQX END=152777957 GT ./. chr1 152784921 . A . . LowGQX END=152785282 GT ./. chr1 152799947 . A . . LowGQX END=152800284 GT ./. chr1 152815996 . A . . LowGQX END=152816240 GT ./. chr1 152856897 . A . . LowGQX END=152857252 GT ./. chr1 152882272 . A . . LowGQX END=152884034 GT ./. chr1 152944365 . C . . LowGQX END=152944609 GT ./. chr1 152957705 . G . . LowGQX END=152957979 GT ./. chr1 152975495 . G . . LowGQX END=152976009 GT ./. chr1 153004820 . G . . LowGQX END=153005094 GT ./. chr1 153012602 . T . . LowGQX END=153012825 GT ./. chr1 153028991 . T . . LowGQX END=153029237 GT ./. chr1 153043095 . T . . LowGQX END=153043337 GT ./. chr1 153066007 . T . . LowGQX END=153066230 GT ./. chr1 153084989 . T . . LowGQX END=153085212 GT ./. chr1 153112966 . G . . LowGQX END=153113147 GT ./. chr1 153122322 . A . . LowGQX END=153122589 GT ./. chr1 153177182 . C . . LowGQX END=153177483 GT ./. chr1 153190620 . G . . LowGQX END=153190972 GT ./. chr1 153233375 . C . . LowGQX END=153234447 GT ./. chr1 153270430 . C . . LowGQX END=153270613 GT ./. chr1 153271587 . A . . LowGQX END=153271710 GT ./. chr1 153274883 . A . . LowGQX END=153275086 GT ./. chr1 153276331 . A . . LowGQX END=153276488 GT ./. chr1 153277421 . A . . LowGQX END=153277544 GT ./. chr1 153279540 . A . . LowGQX END=153279746 GT ./. chr1 153283005 . G . . LowGQX END=153283165 GT ./. chr1 153303241 . T . . LowGQX END=153303424 GT ./. chr1 153309585 . C . . LowGQX END=153309778 GT ./. chr1 153312855 . A . . LowGQX END=153313058 GT ./. chr1 153314101 . A . . LowGQX END=153314258 GT ./. chr1 153315564 . A . . LowGQX END=153315687 GT ./. chr1 153317643 . A . . LowGQX END=153317861 GT ./. chr1 153318573 . T . . LowGQX END=153318673 GT ./. chr1 153320278 . A . . LowGQX END=153320435 GT ./. chr1 153330758 . C . . LowGQX END=153330912 GT ./. chr1 153333118 . A . . LowGQX END=153333317 GT ./. chr1 153346301 . A . . LowGQX END=153346446 GT ./. chr1 153346449 . A . . LowGQX END=153346549 GT ./. chr1 153346929 . A . . LowGQX END=153347078 GT ./. chr1 153362577 . A . . LowGQX END=153362722 GT ./. chr1 153362869 . A . . LowGQX END=153363014 GT ./. chr1 153390557 . A . . LowGQX END=153390702 GT ./. chr1 153391619 . A . . LowGQX END=153391788 GT ./. chr1 153409532 . G . . LowGQX END=153409701 GT ./. chr1 153410663 . A . . LowGQX END=153410823 GT ./. chr1 153412368 . C . . LowGQX END=153412468 GT ./. chr1 153430280 . G . . LowGQX END=153430449 GT ./. chr1 153431347 . A . . LowGQX END=153431492 GT ./. chr1 153507170 . T . . LowGQX END=153507309 GT ./. chr1 153507676 . A . . LowGQX END=153507818 GT ./. chr1 153509770 . G . . LowGQX END=153509915 GT ./. chr1 153512528 . A . . LowGQX END=153512684 GT ./. chr1 153513831 . T . . LowGQX END=153513931 GT ./. chr1 153516233 . T . . LowGQX END=153516402 GT ./. chr1 153517128 . A . . LowGQX END=153517273 GT ./. chr1 153520156 . G . . LowGQX END=153520325 GT ./. chr1 153520788 . G . . LowGQX END=153520964 GT ./. chr1 153533913 . C . . LowGQX END=153534103 GT ./. chr1 153535889 . G . . LowGQX END=153536013 GT ./. chr1 153536208 . A . . LowGQX END=153536353 GT ./. chr1 153580008 . C . . LowGQX END=153580171 GT ./. chr1 153580473 . A . . LowGQX END=153580630 GT ./. chr1 153587359 . T . . LowGQX END=153587501 GT ./. chr1 153587709 . A . . LowGQX END=153587860 GT ./. chr1 153588270 . G . . LowGQX END=153588370 GT ./. chr1 153591369 . C . . LowGQX END=153591517 GT ./. chr1 153598794 . A . . LowGQX END=153598951 GT ./. chr1 153600537 . C . . LowGQX END=153600637 GT ./. chr1 153600888 . G . . LowGQX END=153600988 GT ./. chr1 153602984 . G . . LowGQX END=153603141 GT ./. chr1 153603948 . A . . LowGQX END=153604048 GT ./. chr1 153604172 . A . . LowGQX END=153604320 GT ./. chr1 153609048 . A . . LowGQX END=153609148 GT ./. chr1 153610769 . A . . LowGQX END=153611003 GT ./. chr1 153614718 . G . . LowGQX END=153614926 GT ./. chr1 153615630 . C . . LowGQX END=153615843 GT ./. chr1 153617538 . A . . LowGQX END=153617748 GT ./. chr1 153631187 . C . . LowGQX END=153631398 GT ./. chr1 153631588 . C . . LowGQX END=153631688 GT ./. chr1 153631922 . A . . LowGQX END=153632045 GT ./. chr1 153633674 . A . . LowGQX END=153633780 GT ./. chr1 153634870 . T . . LowGQX END=153635035 GT ./. chr1 153635177 . T . . LowGQX END=153635277 GT ./. chr1 153635493 . A . . LowGQX END=153635612 GT ./. chr1 153635672 . A . . LowGQX END=153635772 GT ./. chr1 153636513 . A . . LowGQX END=153636613 GT ./. chr1 153636862 . A . . LowGQX END=153636962 GT ./. chr1 153637694 . A . . LowGQX END=153637815 GT ./. chr1 153638035 . T . . LowGQX END=153638207 GT ./. chr1 153639971 . C . . LowGQX END=153640136 GT ./. chr1 153640465 . C . . LowGQX END=153640565 GT ./. chr1 153640872 . T . . LowGQX END=153641036 GT ./. chr1 153642284 . A . . LowGQX END=153642384 GT ./. chr1 153642627 . T . . LowGQX END=153642727 GT ./. chr1 153643347 . T . . LowGQX END=153643447 GT ./. chr1 153651583 . C . . LowGQX END=153652313 GT ./. chr1 153652975 . A . . LowGQX END=153653179 GT ./. chr1 153653654 . A . . LowGQX END=153653772 GT ./. chr1 153654178 . A . . LowGQX END=153654318 GT ./. chr1 153654970 . T . . LowGQX END=153655070 GT ./. chr1 153655850 . A . . LowGQX END=153655990 GT ./. chr1 153656209 . C . . LowGQX END=153656309 GT ./. chr1 153657438 . A . . LowGQX END=153657563 GT ./. chr1 153658270 . C . . LowGQX END=153658370 GT ./. chr1 153658588 . T . . LowGQX END=153658688 GT ./. chr1 153659120 . A . . LowGQX END=153659229 GT ./. chr1 153659478 . T . . LowGQX END=153659578 GT ./. chr1 153659674 . A . . LowGQX END=153659835 GT ./. chr1 153660108 . A . . LowGQX END=153660268 GT ./. chr1 153660527 . A . . LowGQX END=153660700 GT ./. chr1 153661427 . A . . LowGQX END=153661578 GT ./. chr1 153661662 . A . . LowGQX END=153661790 GT ./. chr1 153661914 . T . . LowGQX END=153662014 GT ./. chr1 153662280 . A . . LowGQX END=153662459 GT ./. chr1 153662758 . A . . LowGQX END=153662861 GT ./. chr1 153665570 . T . . LowGQX END=153665776 GT ./. chr1 153665810 . C . . LowGQX END=153665910 GT ./. chr1 153701069 . T . . LowGQX END=153701308 GT ./. chr1 153713119 . C . . LowGQX END=153713219 GT ./. chr1 153713753 . C . . LowGQX END=153713853 GT ./. chr1 153719431 . A . . LowGQX END=153719531;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 153719532 . A . . LowGQX . GT ./. chr1 153719533 . C . . LowGQX END=153719549;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 153719748 . C . . LowGQX END=153719848 GT ./. chr1 153721149 . C . . LowGQX END=153721249 GT ./. chr1 153723569 . A . . LowGQX END=153723718 GT ./. chr1 153724703 . A . . LowGQX END=153724887 GT ./. chr1 153727116 . A . . LowGQX END=153727218 GT ./. chr1 153730046 . A . . LowGQX END=153730242 GT ./. chr1 153731996 . T . . LowGQX END=153732096 GT ./. chr1 153732777 . C . . LowGQX END=153732877 GT ./. chr1 153733299 . C . . LowGQX END=153733399 GT ./. chr1 153734044 . A . . LowGQX END=153734155 GT ./. chr1 153735202 . A . . LowGQX END=153735326 GT ./. chr1 153735707 . A . . LowGQX END=153735841 GT ./. chr1 153736286 . T . . LowGQX END=153736386 GT ./. chr1 153736592 . A . . LowGQX END=153736700 GT ./. chr1 153737139 . T . . LowGQX END=153737239 GT ./. chr1 153737418 . A . . LowGQX END=153737542 GT ./. chr1 153740148 . A . . LowGQX END=153740306 GT ./. chr1 153741354 . T . . LowGQX END=153741454 GT ./. chr1 153742233 . C . . LowGQX END=153742333 GT ./. chr1 153742672 . A . . LowGQX END=153742790 GT ./. chr1 153743136 . A . . LowGQX END=153743236 GT ./. chr1 153744270 . A . . LowGQX END=153744442 GT ./. chr1 153744814 . A . . LowGQX END=153745190 GT ./. chr1 153745399 . A . . LowGQX END=153745560 GT ./. chr1 153745658 . A . . LowGQX END=153745758 GT ./. chr1 153747578 . G . . LowGQX END=153748643 GT ./. chr1 153748992 . A . . LowGQX END=153749206 GT ./. chr1 153749536 . A . . LowGQX END=153749699 GT ./. chr1 153750235 . A . . LowGQX END=153750364 GT ./. chr1 153750635 . A . . LowGQX END=153750834 GT ./. chr1 153750935 . C . . LowGQX END=153751035 GT ./. chr1 153751161 . A . . LowGQX END=153751364 GT ./. chr1 153751588 . A . . LowGQX END=153751690 GT ./. chr1 153751817 . A . . LowGQX END=153751952 GT ./. chr1 153752300 . A . . LowGQX END=153752481 GT ./. chr1 153782611 . G . . LowGQX END=153782841 GT ./. chr1 153784135 . G . . LowGQX END=153784327 GT ./. chr1 153784496 . A . . LowGQX END=153784611 GT ./. chr1 153785724 . A . . LowGQX END=153785931 GT ./. chr1 153788747 . A . . LowGQX END=153789067 GT ./. chr1 153789846 . A . . LowGQX END=153790021 GT ./. chr1 153790514 . A . . LowGQX END=153790650 GT ./. chr1 153791265 . A . . LowGQX END=153791401 GT ./. chr1 153792080 . A . . LowGQX END=153792214 GT ./. chr1 153800487 . A . . LowGQX END=153800826 GT ./. chr1 153902772 . T . . LowGQX END=153902919 GT ./. chr1 153902997 . C . . LowGQX END=153903097 GT ./. chr1 153903167 . C . . LowGQX END=153903334 GT ./. chr1 153903381 . A . . LowGQX END=153903592 GT ./. chr1 153904679 . C . . LowGQX END=153904917 GT ./. chr1 153905117 . C . . LowGQX END=153905254 GT ./. chr1 153905336 . C . . LowGQX END=153905507 GT ./. chr1 153905672 . C . . LowGQX END=153905796 GT ./. chr1 153905948 . T . . LowGQX END=153906348 GT ./. chr1 153906610 . C . . LowGQX END=153906800 GT ./. chr1 153907235 . C . . LowGQX END=153907441 GT ./. chr1 153908535 . C . . LowGQX END=153908665 GT ./. chr1 153909017 . C . . LowGQX END=153909225 GT ./. chr1 153909963 . C . . LowGQX END=153910091 GT ./. chr1 153910199 . C . . LowGQX END=153910340 GT ./. chr1 153911375 . C . . LowGQX END=153911522 GT ./. chr1 153912064 . C . . LowGQX END=153912281 GT ./. chr1 153912631 . C . . LowGQX END=153912733 GT ./. chr1 153912906 . C . . LowGQX END=153913083 GT ./. chr1 153913379 . C . . LowGQX END=153913525 GT ./. chr1 153913626 . C . . LowGQX END=153913933 GT ./. chr1 153914344 . C . . LowGQX END=153914590 GT ./. chr1 153914632 . C . . LowGQX END=153914833 GT ./. chr1 153914957 . T . . LowGQX END=153915117 GT ./. chr1 153915353 . C . . LowGQX END=153915607 GT ./. chr1 153916533 . C . . LowGQX END=153916882 GT ./. chr1 153917566 . T . . LowGQX END=153917666 GT ./. chr1 153920583 . C . . LowGQX END=153920808 GT ./. chr1 153920932 . A . . LowGQX END=153921123 GT ./. chr1 153921323 . G . . LowGQX END=153921423 GT ./. chr1 153921589 . A . . LowGQX END=153921863 GT ./. chr1 153923723 . C . . LowGQX END=153924153 GT ./. chr1 153924492 . A . . LowGQX END=153924741 GT ./. chr1 153924848 . T . . LowGQX END=153924948 GT ./. chr1 153925030 . C . . LowGQX END=153925130 GT ./. chr1 153925246 . G . . LowGQX END=153925346 GT ./. chr1 153925693 . A . . LowGQX END=153925900 GT ./. chr1 153925999 . G . . LowGQX END=153926099 GT ./. chr1 153926712 . G . . LowGQX END=153926812 GT ./. chr1 153927346 . T . . LowGQX END=153927468 GT ./. chr1 153927539 . A . . LowGQX END=153927645 GT ./. chr1 153930789 . C . . LowGQX END=153930976 GT ./. chr1 153932572 . C . . LowGQX END=153933233 GT ./. chr1 153934694 . A . . LowGQX END=153934829 GT ./. chr1 153935003 . A . . LowGQX END=153935194 GT ./. chr1 153941000 . G . . LowGQX END=153941178 GT ./. chr1 153941404 . A . . LowGQX END=153941935 GT ./. chr1 153945218 . A . . LowGQX END=153945331 GT ./. chr1 153945446 . A . . LowGQX END=153945557 GT ./. chr1 153945656 . C . . LowGQX END=153945756 GT ./. chr1 153945849 . T . . LowGQX END=153945949 GT ./. chr1 153946094 . A . . LowGQX END=153946195 GT ./. chr1 153946346 . A . . LowGQX END=153946544 GT ./. chr1 153947153 . A . . LowGQX END=153947314 GT ./. chr1 153948292 . C . . LowGQX END=153948392 GT ./. chr1 153949167 . A . . LowGQX END=153949286 GT ./. chr1 153949421 . G . . LowGQX END=153949521 GT ./. chr1 153949638 . C . . LowGQX END=153949738 GT ./. chr1 153954564 . A . . LowGQX END=153954664 GT ./. chr1 153954844 . C . . LowGQX END=153954944 GT ./. chr1 153954994 . G . . LowGQX END=153955094 GT ./. chr1 153955190 . C . . LowGQX END=153955290 GT ./. chr1 153955684 . A . . LowGQX END=153955784 GT ./. chr1 153955976 . G . . LowGQX END=153956076 GT ./. chr1 153957125 . A . . LowGQX END=153957278 GT ./. chr1 153958587 . A . . LowGQX END=153958715 GT ./. chr1 153963226 . T . . LowGQX END=153963326 GT ./. chr1 153963589 . A . . LowGQX END=153963786 GT ./. chr1 153963990 . C . . LowGQX END=153964155 GT ./. chr1 153964496 . A . . LowGQX END=153964596 GT ./. chr1 153965309 . G . . LowGQX END=153965414 GT ./. chr1 153965479 . A . . LowGQX END=153965579 GT ./. chr1 153967550 . A . . LowGQX END=153967659 GT ./. chr1 153973330 . A . . LowGQX END=153973539 GT ./. chr1 153974209 . A . . LowGQX END=153974464 GT ./. chr1 153982446 . A . . LowGQX END=153982600 GT ./. chr1 153984718 . A . . LowGQX END=153984849 GT ./. chr1 153991407 . A . . LowGQX END=153991548 GT ./. chr1 153994600 . A . . LowGQX END=153994822 GT ./. chr1 153995576 . A . . LowGQX END=153995776 GT ./. chr1 153998016 . A . . LowGQX END=153998195 GT ./. chr1 153999978 . T . . LowGQX END=154000078 GT ./. chr1 154002340 . T . . LowGQX END=154002533 GT ./. chr1 154018543 . A . . LowGQX END=154018679 GT ./. chr1 154018756 . C . . LowGQX END=154018856 GT ./. chr1 154026702 . A . . LowGQX END=154026886 GT ./. chr1 154027228 . T . . LowGQX END=154027328 GT ./. chr1 154029289 . A . . LowGQX END=154029469 GT ./. chr1 154030563 . A . . LowGQX END=154030695 GT ./. chr1 154031039 . A . . LowGQX END=154031172 GT ./. chr1 154033014 . A . . LowGQX END=154033120 GT ./. chr1 154033416 . A . . LowGQX END=154033525 GT ./. chr1 154034057 . C . . LowGQX END=154034210 GT ./. chr1 154042747 . A . . LowGQX END=154042944 GT ./. chr1 154061895 . A . . LowGQX END=154062073 GT ./. chr1 154067409 . A . . LowGQX END=154067635 GT ./. chr1 154072472 . A . . LowGQX END=154072622 GT ./. chr1 154076486 . A . . LowGQX END=154076689 GT ./. chr1 154090199 . A . . LowGQX END=154090359 GT ./. chr1 154091145 . A . . LowGQX END=154091287 GT ./. chr1 154098797 . A . . LowGQX END=154098942 GT ./. chr1 154099785 . A . . LowGQX END=154099896 GT ./. chr1 154101738 . T . . LowGQX END=154101838 GT ./. chr1 154108258 . G . . LowGQX END=154108451 GT ./. chr1 154110580 . A . . LowGQX END=154110760 GT ./. chr1 154112276 . A . . LowGQX END=154112431 GT ./. chr1 154113904 . T . . LowGQX END=154114004 GT ./. chr1 154115920 . A . . LowGQX END=154116056 GT ./. chr1 154125210 . A . . LowGQX END=154125351 GT ./. chr1 154127316 . A . . LowGQX END=154127523 GT ./. chr1 154130064 . G . . LowGQX END=154130249 GT ./. chr1 154131394 . A . . LowGQX END=154131576 GT ./. chr1 154140362 . T . . LowGQX END=154140485 GT ./. chr1 154141730 . C . . LowGQX END=154141911 GT ./. chr1 154142821 . A . . LowGQX END=154142997 GT ./. chr1 154143074 . T . . LowGQX END=154143239 GT ./. chr1 154143838 . A . . LowGQX END=154144016 GT ./. chr1 154144453 . A . . LowGQX END=154144991 GT ./. chr1 154145329 . C . . LowGQX END=154145506 GT ./. chr1 154145509 . T . . LowGQX END=154145729 GT ./. chr1 154148540 . G . . LowGQX END=154148776 GT ./. chr1 154155413 . C . . LowGQX END=154155647 GT ./. chr1 154163611 . A . . LowGQX END=154163839 GT ./. chr1 154164327 . T . . LowGQX END=154164546 GT ./. chr1 154166071 . G . . LowGQX END=154166231 GT ./. chr1 154171901 . C . . LowGQX END=154172007 GT ./. chr1 154172933 . A . . LowGQX END=154173067 GT ./. chr1 154178045 . G . . LowGQX END=154178145 GT ./. chr1 154178659 . A . . LowGQX END=154178818 GT ./. chr1 154179926 . C . . LowGQX END=154180127 GT ./. chr1 154184774 . A . . LowGQX END=154184874 GT ./. chr1 154184932 . A . . LowGQX END=154185103 GT ./. chr1 154186346 . G . . LowGQX END=154186446 GT ./. chr1 154186931 . A . . LowGQX END=154187053 GT ./. chr1 154192310 . A . . LowGQX END=154192416 GT ./. chr1 154192801 . T . . LowGQX END=154192901 GT ./. chr1 154197595 . T . . LowGQX END=154197695 GT ./. chr1 154199747 . T . . LowGQX END=154199847 GT ./. chr1 154201089 . A . . LowGQX END=154201204 GT ./. chr1 154207065 . A . . LowGQX END=154207269 GT ./. chr1 154207620 . T . . LowGQX END=154207771 GT ./. chr1 154209015 . C . . LowGQX END=154209115 GT ./. chr1 154209498 . A . . LowGQX END=154209615 GT ./. chr1 154213966 . T . . LowGQX END=154214066 GT ./. chr1 154215686 . T . . LowGQX END=154215786 GT ./. chr1 154218678 . A . . LowGQX END=154218854 GT ./. chr1 154221713 . A . . LowGQX END=154221916 GT ./. chr1 154223515 . A . . LowGQX END=154223797 GT ./. chr1 154223955 . A . . LowGQX END=154224132 GT ./. chr1 154226363 . T . . LowGQX END=154226568 GT ./. chr1 154227230 . A . . LowGQX END=154227390 GT ./. chr1 154227626 . A . . LowGQX END=154227805 GT ./. chr1 154228146 . T . . LowGQX END=154228246 GT ./. chr1 154229537 . A . . LowGQX END=154229737 GT ./. chr1 154229817 . T . . LowGQX END=154229917 GT ./. chr1 154231430 . T . . LowGQX END=154231530 GT ./. chr1 154232415 . C . . LowGQX END=154232515 GT ./. chr1 154233366 . A . . LowGQX END=154233588 GT ./. chr1 154234016 . A . . LowGQX END=154234176 GT ./. chr1 154235554 . T . . LowGQX END=154235654 GT ./. chr1 154238961 . T . . LowGQX END=154239061 GT ./. chr1 154241231 . A . . LowGQX END=154241433 GT ./. chr1 154241813 . T . . LowGQX END=154241913 GT ./. chr1 154242674 . A . . LowGQX END=154242962 GT ./. chr1 154243326 . T . . LowGQX END=154243426 GT ./. chr1 154245149 . T . . PASS END=154245236;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:60:99:60 chr1 154245237 . T . . PASS END=154245304;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:82:99:60 chr1 154245761 . A . . PASS END=154245875;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:76:99:60 chr1 154245876 . G . . PASS END=154246007;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:92:99:59 chr1 154246008 . C . . PASS END=154246126;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:104:99:60 chr1 154246155 . G . . PASS END=154246302;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:103:99:60 chr1 154246303 . A . . PASS END=154246362;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:129:99:60 chr1 154246363 . G . . PASS END=154246489;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:158:99:60 chr1 154247362 . G . . PASS END=154247403;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:90:99:60 chr1 154247404 . C . . PASS END=154247529;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:87:99:60 chr1 154247542 . C . . PASS END=154247788;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:104:99:60 chr1 154247818 . G . . PASS END=154248011;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:83:99:60 chr1 154248041 . T . . PASS END=154248123;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:65:99:60 chr1 154248124 . G . . PASS END=154248142;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:64:99:60 chr1 154248143 . A . . PASS END=154248227;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:70:99:59 chr1 154248228 . C . . PASS END=154248229;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:67:99:60 chr1 154293630 . C . . LowGQX END=154293739 GT ./. chr1 154294376 . C . . LowGQX END=154294538 GT ./. chr1 154295456 . A . . LowGQX END=154295598 GT ./. chr1 154295715 . A . . LowGQX END=154295838 GT ./. chr1 154296063 . A . . LowGQX END=154296371 GT ./. chr1 154296756 . A . . LowGQX END=154296959 GT ./. chr1 154300257 . A . . LowGQX END=154300357 GT ./. chr1 154300565 . C . . LowGQX END=154300665 GT ./. chr1 154301402 . G . . LowGQX END=154301558 GT ./. chr1 154302852 . G . . LowGQX END=154302952 GT ./. chr1 154303289 . A . . LowGQX END=154303407 GT ./. chr1 154303522 . A . . LowGQX END=154303625 GT ./. chr1 154303901 . T . . LowGQX END=154304001 GT ./. chr1 154304069 . C . . LowGQX END=154304169 GT ./. chr1 154304416 . G . . LowGQX END=154304516 GT ./. chr1 154305084 . G . . LowGQX END=154305184 GT ./. chr1 154306581 . A . . LowGQX END=154306744 GT ./. chr1 154306974 . T . . LowGQX END=154307074 GT ./. chr1 154309822 . A . . LowGQX END=154310153 GT ./. chr1 154313328 . A . . LowGQX END=154313541 GT ./. chr1 154313576 . C . . LowGQX END=154313736 GT ./. chr1 154314928 . C . . LowGQX END=154315028 GT ./. chr1 154315270 . A . . LowGQX END=154315440 GT ./. chr1 154315587 . A . . LowGQX END=154315780 GT ./. chr1 154315927 . A . . LowGQX END=154316047 GT ./. chr1 154316367 . A . . LowGQX END=154316536 GT ./. chr1 154316617 . A . . LowGQX END=154316733 GT ./. chr1 154316869 . A . . LowGQX END=154316979 GT ./. chr1 154317115 . A . . LowGQX END=154317264 GT ./. chr1 154317445 . A . . LowGQX END=154317633 GT ./. chr1 154317796 . A . . LowGQX END=154318024 GT ./. chr1 154318268 . T . . LowGQX END=154318368 GT ./. chr1 154318705 . A . . LowGQX END=154318955 GT ./. chr1 154319094 . A . . LowGQX END=154319237 GT ./. chr1 154320882 . A . . LowGQX END=154321017 GT ./. chr1 154321314 . A . . LowGQX END=154321597 GT ./. chr1 154378043 . C . . LowGQX END=154378199 GT ./. chr1 154401670 . A . . LowGQX END=154401923 GT ./. chr1 154402957 . A . . LowGQX END=154403127 GT ./. chr1 154406993 . A . . LowGQX END=154407179 GT ./. chr1 154407464 . A . . LowGQX END=154407635 GT ./. chr1 154408443 . A . . LowGQX END=154408589 GT ./. chr1 154409910 . G . . LowGQX END=154410021 GT ./. chr1 154417497 . G . . LowGQX END=154417597 GT ./. chr1 154420575 . A . . LowGQX END=154420675 GT ./. chr1 154422372 . G . . LowGQX END=154422472 GT ./. chr1 154426961 . T . . LowGQX END=154427061 GT ./. chr1 154437608 . A . . LowGQX END=154437859 GT ./. chr1 154442780 . T . . LowGQX END=154442880 GT ./. chr1 154456623 . T . . LowGQX END=154456814 GT ./. chr1 154458417 . A . . LowGQX END=154458541 GT ./. chr1 154459001 . A . . LowGQX END=154459162 GT ./. chr1 154461525 . A . . LowGQX END=154461835 GT ./. chr1 154471586 . A . . LowGQX END=154471717 GT ./. chr1 154473910 . A . . LowGQX END=154474509 GT ./. chr1 154479331 . C . . LowGQX END=154479431 GT ./. chr1 154479707 . T . . LowGQX END=154479807 GT ./. chr1 154480879 . A . . LowGQX END=154480979 GT ./. chr1 154492766 . C . . LowGQX END=154492866 GT ./. chr1 154493797 . A . . LowGQX END=154493958 GT ./. chr1 154514472 . G . . LowGQX END=154514572 GT ./. chr1 154515203 . C . . LowGQX END=154515303 GT ./. chr1 154516437 . A . . LowGQX END=154516617 GT ./. chr1 154516846 . A . . LowGQX END=154516996 GT ./. chr1 154517269 . A . . LowGQX END=154517428 GT ./. chr1 154519883 . A . . LowGQX END=154520036 GT ./. chr1 154520120 . T . . LowGQX END=154520220 GT ./. chr1 154522880 . T . . LowGQX END=154522980 GT ./. chr1 154523398 . C . . LowGQX END=154523498 GT ./. chr1 154523871 . A . . LowGQX END=154523971 GT ./. chr1 154524222 . G . . LowGQX END=154524322 GT ./. chr1 154524377 . T . . LowGQX END=154524477 GT ./. chr1 154524565 . T . . LowGQX END=154524665 GT ./. chr1 154524861 . T . . LowGQX END=154524961 GT ./. chr1 154525205 . A . . LowGQX END=154525305 GT ./. chr1 154525506 . A . . LowGQX END=154525651 GT ./. chr1 154527187 . T . . LowGQX END=154527287 GT ./. chr1 154527902 . A . . LowGQX END=154528011 GT ./. chr1 154528334 . A . . LowGQX END=154528443 GT ./. chr1 154530701 . A . . LowGQX END=154531032 GT ./. chr1 154540470 . C . . LowGQX END=154540636 GT ./. chr1 154541887 . G . . LowGQX END=154542135 GT ./. chr1 154542217 . T . . LowGQX END=154542364 GT ./. chr1 154542683 . G . . LowGQX END=154542895 GT ./. chr1 154543614 . A . . LowGQX END=154544689 GT ./. chr1 154548187 . T . . LowGQX END=154548460 GT ./. chr1 154557231 . T . . LowGQX END=154557571 GT ./. chr1 154557642 . T . . LowGQX END=154557872 GT ./. chr1 154558178 . C . . LowGQX END=154558393 GT ./. chr1 154558606 . C . . LowGQX END=154558891 GT ./. chr1 154560550 . G . . LowGQX END=154560786 GT ./. chr1 154560976 . T . . LowGQX END=154561201 GT ./. chr1 154561794 . C . . LowGQX END=154561990 GT ./. chr1 154562182 . C . . LowGQX END=154562456 GT ./. chr1 154562609 . T . . LowGQX END=154562937 GT ./. chr1 154569230 . A . . LowGQX END=154569523 GT ./. chr1 154569548 . C . . LowGQX END=154569795 GT ./. chr1 154570253 . C . . LowGQX END=154570504 GT ./. chr1 154570827 . T . . LowGQX END=154571113 GT ./. chr1 154573466 . G . . LowGQX END=154575154 GT ./. chr1 154580395 . A . . LowGQX END=154580534 GT ./. chr1 154600290 . C . . LowGQX END=154600475 GT ./. chr1 154680401 . G . . LowGQX END=154680800 GT ./. chr1 154685889 . A . . LowGQX END=154686061 GT ./. chr1 154687301 . C . . LowGQX END=154687531 GT ./. chr1 154698341 . T . . LowGQX END=154698554 GT ./. chr1 154705428 . A . . LowGQX END=154705672 GT ./. chr1 154709472 . C . . LowGQX END=154709572 GT ./. chr1 154744369 . A . . LowGQX END=154744921 GT ./. chr1 154794514 . C . . LowGQX END=154794712 GT ./. chr1 154832120 . T . . LowGQX END=154832240 GT ./. chr1 154841457 . T . . LowGQX END=154842726 GT ./. chr1 154897603 . G . . LowGQX END=154897744 GT ./. chr1 154898828 . A . . LowGQX END=154898962 GT ./. chr1 154901498 . A . . LowGQX END=154901655 GT ./. chr1 154904750 . A . . LowGQX END=154904910 GT ./. chr1 154909065 . A . . LowGQX END=154909165 GT ./. chr1 154917497 . G . . LowGQX END=154917597 GT ./. chr1 154918046 . A . . LowGQX END=154919282 GT ./. chr1 154919721 . C . . LowGQX END=154920027 GT ./. chr1 154920104 . A . . LowGQX END=154920204 GT ./. chr1 154920360 . G . . LowGQX END=154920520 GT ./. chr1 154920607 . A . . LowGQX END=154920912 GT ./. chr1 154923706 . A . . LowGQX END=154923876 GT ./. chr1 154923930 . A . . LowGQX END=154924030 GT ./. chr1 154924219 . A . . LowGQX END=154924400 GT ./. chr1 154926123 . G . . LowGQX END=154926223 GT ./. chr1 154931253 . C . . LowGQX END=154932325 GT ./. chr1 154933368 . T . . LowGQX END=154933528 GT ./. chr1 154933897 . G . . LowGQX END=154934055 GT ./. chr1 154936277 . G . . LowGQX END=154936410 GT ./. chr1 154936565 . T . . LowGQX END=154936845 GT ./. chr1 154937845 . C . . LowGQX END=154938260 GT ./. chr1 154938420 . A . . LowGQX END=154938559 GT ./. chr1 154938623 . C . . LowGQX END=154938723 GT ./. chr1 154938793 . A . . LowGQX END=154938996 GT ./. chr1 154940145 . A . . LowGQX END=154940276 GT ./. chr1 154940432 . C . . LowGQX END=154940532 GT ./. chr1 154940657 . C . . LowGQX END=154940757 GT ./. chr1 154940969 . A . . LowGQX END=154941093 GT ./. chr1 154941229 . C . . LowGQX END=154941329 GT ./. chr1 154941840 . C . . LowGQX END=154941940 GT ./. chr1 154942506 . A . . LowGQX END=154943014 GT ./. chr1 154947202 . G . . LowGQX END=154947302 GT ./. chr1 154947333 . G . . LowGQX END=154947433 GT ./. chr1 154950461 . A . . LowGQX END=154950608 GT ./. chr1 154951178 . T . . LowGQX END=154951278 GT ./. chr1 154956169 . A . . LowGQX END=154956545 GT ./. chr1 154960505 . G . . LowGQX END=154961391 GT ./. chr1 154962034 . A . . LowGQX END=154962186 GT ./. chr1 154962633 . A . . LowGQX END=154962665 GT ./. chr1 154962666 . A . . LowGQX END=154962678;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 154962679 . G . . LowGQX . GT ./. chr1 154962680 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 154962681 . A . . LowGQX . GT ./. chr1 154962682 . G . . LowGQX END=154962683;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 154962684 . A . . LowGQX . GT ./. chr1 154962685 . T . . LowGQX END=154962706;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 154962707 . A . . LowGQX . GT ./. chr1 154962708 . C . . LowGQX END=154962710;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 154962711 . T . . LowGQX . GT ./. chr1 154962712 . T . . LowGQX END=154962719;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 154962720 . G . . LowGQX END=154962721 GT ./. chr1 154962722 . C . . LowGQX END=154962725;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 154962726 . A . . LowGQX . GT ./. chr1 154962727 . T . . LowGQX END=154962731;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 154962732 . A . . LowGQX END=154962733 GT ./. chr1 154962734 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 154962735 . T . . LowGQX END=154962736 GT ./. chr1 154962737 . C . . LowGQX END=154962741;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 154962813 . A . . LowGQX END=154962816;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 154962817 . A . . LowGQX END=154963007 GT ./. chr1 154965040 . G . . LowGQX END=154965140 GT ./. chr1 154965177 . C . . LowGQX END=154965277 GT ./. chr1 154965376 . A . . LowGQX END=154965516 GT ./. chr1 154966071 . A . . LowGQX END=154966282 GT ./. chr1 154983394 . A . . LowGQX END=154983494 GT ./. chr1 154987130 . G . . LowGQX END=154988293 GT ./. chr1 154988694 . A . . LowGQX END=154989164 GT ./. chr1 154991018 . G . . LowGQX END=154991239 GT ./. chr1 154995591 . A . . LowGQX END=154995736 GT ./. chr1 154995837 . C . . LowGQX END=154995937 GT ./. chr1 154996022 . C . . LowGQX END=154996122 GT ./. chr1 154996306 . A . . LowGQX END=154996438 GT ./. chr1 154996946 . A . . LowGQX END=154997081 GT ./. chr1 154998776 . A . . LowGQX END=154998881 GT ./. chr1 154999022 . A . . LowGQX END=154999194 GT ./. chr1 155001707 . A . . LowGQX END=155001876 GT ./. chr1 155002558 . A . . LowGQX END=155002720 GT ./. chr1 155002906 . A . . LowGQX END=155003124 GT ./. chr1 155003573 . G . . LowGQX END=155003728 GT ./. chr1 155004048 . A . . LowGQX END=155004250 GT ./. chr1 155005141 . A . . LowGQX END=155005247 GT ./. chr1 155005568 . A . . LowGQX END=155005743 GT ./. chr1 155005908 . A . . LowGQX END=155006180 GT ./. chr1 155006494 . G . . LowGQX END=155006594 GT ./. chr1 155006814 . G . . LowGQX END=155007039 GT ./. chr1 155007117 . T . . LowGQX END=155007217 GT ./. chr1 155011877 . A . . LowGQX END=155012010 GT ./. chr1 155012959 . A . . LowGQX END=155013103 GT ./. chr1 155013871 . A . . LowGQX END=155014092 GT ./. chr1 155014188 . A . . LowGQX END=155014336 GT ./. chr1 155015209 . A . . LowGQX END=155015335 GT ./. chr1 155015805 . T . . LowGQX END=155015988 GT ./. chr1 155018367 . A . . LowGQX END=155018471 GT ./. chr1 155018599 . A . . LowGQX END=155018699 GT ./. chr1 155018834 . A . . LowGQX END=155018965 GT ./. chr1 155019615 . A . . LowGQX END=155019791 GT ./. chr1 155020261 . A . . LowGQX END=155020408 GT ./. chr1 155020531 . A . . LowGQX END=155020649 GT ./. chr1 155021469 . G . . LowGQX END=155021596 GT ./. chr1 155023091 . A . . LowGQX END=155023347 GT ./. chr1 155023800 . C . . LowGQX END=155024011 GT ./. chr1 155024972 . A . . LowGQX END=155025072 GT ./. chr1 155025096 . C . . LowGQX END=155025256 GT ./. chr1 155025882 . G . . LowGQX END=155025982 GT ./. chr1 155026376 . C . . LowGQX END=155026476 GT ./. chr1 155026564 . C . . LowGQX END=155026715 GT ./. chr1 155026788 . A . . LowGQX END=155026985 GT ./. chr1 155028248 . T . . LowGQX END=155028348 GT ./. chr1 155028393 . T . . LowGQX END=155028493 GT ./. chr1 155028554 . A . . LowGQX END=155028728 GT ./. chr1 155028855 . C . . LowGQX END=155028955 GT ./. chr1 155029427 . A . . LowGQX END=155029580 GT ./. chr1 155029662 . A . . LowGQX END=155029841 GT ./. chr1 155030110 . C . . LowGQX END=155030210 GT ./. chr1 155030325 . A . . LowGQX END=155030634 GT ./. chr1 155030720 . A . . LowGQX END=155030951 GT ./. chr1 155031115 . A . . LowGQX END=155031275 GT ./. chr1 155032365 . T . . LowGQX END=155032465 GT ./. chr1 155032679 . A . . LowGQX END=155032822 GT ./. chr1 155033224 . T . . LowGQX END=155033324 GT ./. chr1 155033889 . A . . LowGQX END=155033993 GT ./. chr1 155034378 . A . . LowGQX END=155034494 GT ./. chr1 155034719 . A . . LowGQX END=155034889 GT ./. chr1 155034908 . T . . LowGQX END=155035008 GT ./. chr1 155036298 . C . . LowGQX END=155036458 GT ./. chr1 155039204 . A . . LowGQX END=155039495 GT ./. chr1 155039833 . T . . LowGQX END=155039933 GT ./. chr1 155041327 . A . . LowGQX END=155041468 GT ./. chr1 155041473 . A . . LowGQX END=155041673 GT ./. chr1 155051385 . A . . LowGQX END=155051548 GT ./. chr1 155057562 . C . . LowGQX END=155057883 GT ./. chr1 155058336 . C . . LowGQX END=155058436 GT ./. chr1 155058593 . C . . LowGQX END=155058693 GT ./. chr1 155058887 . A . . LowGQX END=155059022 GT ./. chr1 155100450 . C . . LowGQX END=155100550 GT ./. chr1 155103813 . A . . LowGQX END=155104113 GT ./. chr1 155105962 . G . . LowGQX END=155106062 GT ./. chr1 155106182 . T . . LowGQX END=155106282 GT ./. chr1 155106429 . A . . LowGQX END=155106546 GT ./. chr1 155108102 . A . . LowGQX END=155108202 GT ./. chr1 155108378 . T . . LowGQX END=155108478 GT ./. chr1 155108764 . C . . LowGQX END=155108864 GT ./. chr1 155109302 . A . . LowGQX END=155109430 GT ./. chr1 155110035 . A . . LowGQX END=155110201 GT ./. chr1 155110453 . A . . LowGQX END=155110577 GT ./. chr1 155110654 . A . . LowGQX END=155110760 GT ./. chr1 155112387 . T . . LowGQX END=155112858 GT ./. chr1 155141914 . G . . LowGQX END=155142039 GT ./. chr1 155142251 . G . . LowGQX END=155142351 GT ./. chr1 155145020 . C . . LowGQX END=155145120 GT ./. chr1 155145212 . A . . LowGQX END=155145371 GT ./. chr1 155145688 . T . . LowGQX END=155145788 GT ./. chr1 155145868 . A . . LowGQX END=155145968 GT ./. chr1 155146425 . G . . LowGQX END=155146525 GT ./. chr1 155146996 . G . . LowGQX END=155147156 GT ./. chr1 155147192 . G . . LowGQX END=155147352 GT ./. chr1 155147850 . G . . LowGQX END=155148270 GT ./. chr1 155148362 . A . . LowGQX END=155148710 GT ./. chr1 155149406 . A . . LowGQX END=155149554 GT ./. chr1 155149669 . A . . LowGQX END=155149769 GT ./. chr1 155150476 . A . . LowGQX END=155150734 GT ./. chr1 155150966 . A . . LowGQX END=155151092 GT ./. chr1 155151194 . C . . LowGQX END=155151354 GT ./. chr1 155152106 . A . . LowGQX END=155152413 GT ./. chr1 155152895 . A . . LowGQX END=155152995 GT ./. chr1 155154326 . A . . LowGQX END=155154675 GT ./. chr1 155156271 . A . . LowGQX END=155156669 GT ./. chr1 155158349 . C . . LowGQX END=155158688 GT ./. chr1 155159215 . T . . LowGQX END=155159388 GT ./. chr1 155159699 . A . . LowGQX END=155159853 GT ./. chr1 155159929 . A . . LowGQX END=155160055 GT ./. chr1 155160196 . A . . LowGQX END=155160337 GT ./. chr1 155160462 . G . . LowGQX END=155160562 GT ./. chr1 155160637 . A . . LowGQX END=155161429 GT ./. chr1 155161466 . C . . LowGQX END=155161566 GT ./. chr1 155161656 . G . . LowGQX END=155162279 GT ./. chr1 155162556 . T . . LowGQX END=155162656 GT ./. chr1 155165612 . T . . LowGQX END=155165712 GT ./. chr1 155165776 . A . . LowGQX END=155165920 GT ./. chr1 155166830 . A . . LowGQX END=155167007 GT ./. chr1 155167252 . A . . LowGQX END=155167453 GT ./. chr1 155167646 . A . . LowGQX END=155167746 GT ./. chr1 155167831 . A . . LowGQX END=155168014 GT ./. chr1 155168198 . A . . LowGQX END=155168396 GT ./. chr1 155169572 . G . . LowGQX END=155169672 GT ./. chr1 155169784 . A . . LowGQX END=155169907 GT ./. chr1 155170240 . A . . LowGQX END=155170404 GT ./. chr1 155170686 . A . . LowGQX END=155170798 GT ./. chr1 155170883 . A . . LowGQX END=155170998 GT ./. chr1 155171206 . A . . LowGQX END=155171389 GT ./. chr1 155171737 . A . . LowGQX END=155171837 GT ./. chr1 155172050 . A . . LowGQX END=155172195 GT ./. chr1 155172601 . A . . LowGQX END=155172754 GT ./. chr1 155172853 . A . . LowGQX END=155172953 GT ./. chr1 155173006 . A . . LowGQX END=155173106 GT ./. chr1 155173268 . C . . LowGQX END=155173368 GT ./. chr1 155174590 . T . . LowGQX END=155174751 GT ./. chr1 155174849 . A . . LowGQX END=155175110 GT ./. chr1 155175989 . A . . LowGQX END=155176200 GT ./. chr1 155177579 . A . . LowGQX END=155177679 GT ./. chr1 155178594 . A . . LowGQX END=155179126 GT ./. chr1 155180131 . C . . LowGQX END=155180231 GT ./. chr1 155180329 . T . . LowGQX END=155180429 GT ./. chr1 155181915 . C . . LowGQX END=155182015 GT ./. chr1 155182174 . A . . LowGQX END=155182361 GT ./. chr1 155182474 . C . . LowGQX END=155182574 GT ./. chr1 155182995 . C . . LowGQX END=155183185 GT ./. chr1 155183202 . G . . LowGQX END=155183492 GT ./. chr1 155184159 . T . . LowGQX END=155184265 GT ./. chr1 155184359 . C . . LowGQX END=155184476 GT ./. chr1 155184845 . C . . LowGQX END=155184954 GT ./. chr1 155185354 . T . . LowGQX END=155185579 GT ./. chr1 155186175 . C . . LowGQX END=155186413 GT ./. chr1 155186648 . T . . LowGQX END=155186821 GT ./. chr1 155187031 . C . . LowGQX END=155187165 GT ./. chr1 155187748 . T . . LowGQX END=155187848 GT ./. chr1 155188175 . T . . LowGQX END=155188275 GT ./. chr1 155188603 . A . . LowGQX END=155188703 GT ./. chr1 155194619 . T . . LowGQX END=155194719 GT ./. chr1 155203757 . C . . LowGQX END=155203857 GT ./. chr1 155203902 . C . . LowGQX END=155204241 GT ./. chr1 155204735 . G . . LowGQX END=155205154 GT ./. chr1 155205421 . G . . LowGQX END=155205687 GT ./. chr1 155205985 . A . . LowGQX END=155206312 GT ./. chr1 155207081 . T . . LowGQX END=155207421 GT ./. chr1 155207874 . A . . LowGQX END=155208149 GT ./. chr1 155208235 . G . . LowGQX END=155208493 GT ./. chr1 155209356 . A . . LowGQX END=155209605 GT ./. chr1 155209626 . A . . LowGQX END=155209920 GT ./. chr1 155210370 . G . . LowGQX END=155210560 GT ./. chr1 155210826 . C . . LowGQX END=155210961 GT ./. chr1 155217186 . C . . LowGQX END=155217321 GT ./. chr1 155217550 . T . . LowGQX END=155217754 GT ./. chr1 155217824 . G . . LowGQX END=155218097 GT ./. chr1 155218181 . A . . LowGQX END=155218281 GT ./. chr1 155220054 . G . . LowGQX END=155220721 GT ./. chr1 155220871 . T . . LowGQX END=155220971 GT ./. chr1 155221291 . A . . LowGQX END=155221451 GT ./. chr1 155221492 . A . . LowGQX END=155221716 GT ./. chr1 155223344 . T . . LowGQX END=155223526 GT ./. chr1 155223598 . C . . LowGQX END=155223772 GT ./. chr1 155223873 . A . . LowGQX END=155223988 GT ./. chr1 155224170 . G . . LowGQX END=155224270 GT ./. chr1 155224442 . A . . LowGQX END=155224671 GT ./. chr1 155226062 . G . . LowGQX END=155226213 GT ./. chr1 155226463 . A . . LowGQX END=155226585 GT ./. chr1 155227074 . A . . LowGQX END=155227180 GT ./. chr1 155227287 . A . . LowGQX END=155227451 GT ./. chr1 155228615 . A . . LowGQX END=155228748 GT ./. chr1 155230119 . A . . LowGQX END=155230244 GT ./. chr1 155230276 . G . . LowGQX END=155230453 GT ./. chr1 155231437 . C . . LowGQX END=155231537 GT ./. chr1 155231860 . C . . LowGQX END=155231960 GT ./. chr1 155233007 . C . . LowGQX END=155233194 GT ./. chr1 155233737 . T . . LowGQX END=155233837 GT ./. chr1 155234002 . C . . LowGQX END=155234102 GT ./. chr1 155234251 . T . . LowGQX END=155234351 GT ./. chr1 155234434 . A . . LowGQX END=155234568 GT ./. chr1 155235649 . A . . LowGQX END=155235749 GT ./. chr1 155236518 . A . . LowGQX END=155236708 GT ./. chr1 155237799 . A . . LowGQX END=155237920 GT ./. chr1 155238068 . A . . LowGQX END=155238168 GT ./. chr1 155238492 . C . . LowGQX END=155238592 GT ./. chr1 155239277 . A . . LowGQX END=155239510 GT ./. chr1 155240597 . A . . LowGQX END=155240771 GT ./. chr1 155247380 . C . . LowGQX END=155247662 GT ./. chr1 155252200 . A . . LowGQX END=155252634 GT ./. chr1 155253763 . A . . LowGQX END=155253929 GT ./. chr1 155254328 . A . . LowGQX END=155254551 GT ./. chr1 155254954 . A . . LowGQX END=155255105 GT ./. chr1 155255513 . A . . LowGQX END=155255758 GT ./. chr1 155256962 . A . . LowGQX END=155257131 GT ./. chr1 155257570 . A . . LowGQX END=155258257 GT ./. chr1 155260312 . A . . LowGQX END=155260521 GT ./. chr1 155261496 . G . . LowGQX END=155261780 GT ./. chr1 155262917 . G . . LowGQX END=155263433 GT ./. chr1 155263975 . A . . LowGQX END=155264595 GT ./. chr1 155264856 . G . . LowGQX END=155265145 GT ./. chr1 155265177 . A . . LowGQX END=155265231 GT ./. chr1 155265232 . T . . LowGQX . GT:DP:GQX:MQ 0/0:2:3:60 chr1 155265233 . G . . PASS END=155265235;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:13:21:60 chr1 155265236 . G . . PASS END=155265237;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:20:36:60 chr1 155265238 . A . . PASS . GT:DP:GQX:MQ 0/0:33:57:60 chr1 155265239 . T . . PASS END=155265248;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:52:90:60 chr1 155265249 . G . . PASS END=155265256;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:71:99:60 chr1 155265257 . G . . PASS END=155265264;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:97:99:60 chr1 155265265 . G . . PASS END=155265276;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:129:99:60 chr1 155265277 . A . . PASS END=155265298;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:171:99:60 chr1 155265299 . G . . PASS END=155265366;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:193:99:60 chr1 155265367 . A . . PASS END=155265391;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:137:99:60 chr1 155265392 . G . . PASS END=155265408;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:104:99:60 chr1 155265409 . C . . PASS END=155265423;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:81:99:60 chr1 155265424 . C . . PASS END=155265426;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:68:99:60 chr1 155265426 . C CA 1439.57 PASS BaseQRankSum=0.953;DP=68;FS=10.623;HRun=0;HaplotypeScore=81.0877;MQ=60;MQ0=0;MQRankSum=0.054;QD=21.17;ReadPosRankSum=-1.887;SB=-622.91;TI=NM_181871,NM_000298;GI=PKLR,PKLR;FC=Noncoding,Noncoding GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:7,27:68:99:1479,0,146:60:99:0.794 chr1 155265427 . C . . PASS END=155265430;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:35:63:60 chr1 155265431 . C . . PASS END=155265433;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:13:30:60 chr1 155265434 . T . . PASS END=155265474;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:8:21:60 chr1 155265475 . A . . PASS END=155265505;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:12:21:60 chr1 155265506 . T . . LowGQX . GT:DP:GQX:MQ 0/0:13:0:60 chr1 155265507 . G . . PASS END=155265563;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:12:21:60 chr1 155265564 . A . . PASS . GT:DP:GQX:MQ 0/0:12:18:60 chr1 155265565 . C . . PASS END=155265575;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:11:21:60 chr1 155265576 . C . . PASS END=155265581;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:9:21:60 chr1 155265582 . C . . LowGQX . GT:DP:GQX:MQ 0/0:9:2:60 chr1 155265583 . C . . PASS END=155265596;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:9:21:60 chr1 155265597 . G . . PASS END=155265599;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:10:18:60 chr1 155269838 . C . . LowGQX END=155270123 GT ./. chr1 155270585 . C . . LowGQX END=155270763 GT ./. chr1 155271036 . T . . LowGQX END=155271238 GT ./. chr1 155279579 . G . . LowGQX END=155279759 GT ./. chr1 155279832 . A . . LowGQX END=155279999 GT ./. chr1 155282044 . A . . LowGQX END=155282189 GT ./. chr1 155287723 . T . . LowGQX END=155287823 GT ./. chr1 155287958 . A . . LowGQX END=155288085 GT ./. chr1 155288394 . G . . LowGQX END=155288551 GT ./. chr1 155288634 . T . . LowGQX END=155288734 GT ./. chr1 155289391 . T . . LowGQX END=155289491 GT ./. chr1 155289583 . A . . LowGQX END=155289722 GT ./. chr1 155290198 . A . . LowGQX END=155290403 GT ./. chr1 155290558 . G . . LowGQX END=155291288 GT ./. chr1 155291556 . G . . LowGQX END=155292931 GT ./. chr1 155294166 . C . . LowGQX END=155294377 GT ./. chr1 155294634 . A . . LowGQX END=155294737 GT ./. chr1 155294882 . A . . LowGQX END=155294982 GT ./. chr1 155294999 . A . . LowGQX END=155295284 GT ./. chr1 155295356 . A . . LowGQX END=155295466 GT ./. chr1 155295629 . C . . LowGQX END=155295729 GT ./. chr1 155296369 . A . . LowGQX END=155296778 GT ./. chr1 155296779 . G . . LowGQX END=155296926;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 155297939 . A . . LowGQX END=155298069 GT ./. chr1 155300172 . A . . LowGQX END=155300365 GT ./. chr1 155307447 . A . . LowGQX END=155307547 GT ./. chr1 155307878 . A . . LowGQX END=155308184 GT ./. chr1 155309090 . G . . LowGQX END=155309190 GT ./. chr1 155311725 . A . . LowGQX END=155311896 GT ./. chr1 155313103 . A . . LowGQX END=155313280 GT ./. chr1 155313393 . A . . LowGQX END=155313536 GT ./. chr1 155313970 . A . . LowGQX END=155314070 GT ./. chr1 155315900 . C . . LowGQX END=155316000 GT ./. chr1 155316141 . A . . LowGQX END=155316311 GT ./. chr1 155317445 . A . . LowGQX END=155317698 GT ./. chr1 155319116 . A . . LowGQX END=155319253 GT ./. chr1 155319311 . A . . LowGQX END=155319411 GT ./. chr1 155322495 . A . . LowGQX END=155322652 GT ./. chr1 155324262 . A . . LowGQX END=155324424 GT ./. chr1 155327105 . A . . LowGQX END=155327205 GT ./. chr1 155327374 . A . . LowGQX END=155327543 GT ./. chr1 155330090 . A . . LowGQX END=155330203 GT ./. chr1 155340293 . A . . LowGQX END=155340444 GT ./. chr1 155340566 . A . . LowGQX END=155340777 GT ./. chr1 155348070 . A . . LowGQX END=155348183 GT ./. chr1 155348267 . A . . LowGQX END=155348367 GT ./. chr1 155349828 . C . . LowGQX END=155349928 GT ./. chr1 155365248 . A . . LowGQX END=155365348 GT ./. chr1 155385513 . G . . LowGQX END=155385717 GT ./. chr1 155402993 . A . . LowGQX END=155403854 GT ./. chr1 155408116 . A . . LowGQX END=155408862 GT ./. chr1 155429529 . A . . LowGQX END=155429692 GT ./. chr1 155447675 . A . . LowGQX END=155452243 GT ./. chr1 155490033 . C . . LowGQX END=155490192 GT ./. chr1 155490889 . A . . LowGQX END=155491313 GT ./. chr1 155531918 . A . . LowGQX END=155532078 GT ./. chr1 155532096 . A . . LowGQX END=155533026 GT ./. chr1 155533041 . T . . LowGQX END=155533360 GT ./. chr1 155579977 . C . . LowGQX END=155580132 GT ./. chr1 155580183 . A . . LowGQX END=155580354 GT ./. chr1 155580815 . G . . LowGQX END=155580915 GT ./. chr1 155580995 . A . . LowGQX END=155581095 GT ./. chr1 155581218 . G . . LowGQX END=155581397 GT ./. chr1 155581447 . G . . LowGQX END=155581621 GT ./. chr1 155581757 . A . . LowGQX END=155581894 GT ./. chr1 155581971 . A . . LowGQX END=155582110 GT ./. chr1 155582207 . A . . LowGQX END=155582364 GT ./. chr1 155582633 . A . . LowGQX END=155582769 GT ./. chr1 155582838 . A . . LowGQX END=155583027 GT ./. chr1 155583216 . C . . LowGQX END=155583360 GT ./. chr1 155583446 . A . . LowGQX END=155583610 GT ./. chr1 155583848 . A . . LowGQX END=155584067 GT ./. chr1 155629446 . G . . LowGQX END=155630725 GT ./. chr1 155631019 . A . . LowGQX END=155631217 GT ./. chr1 155638416 . A . . LowGQX END=155638571 GT ./. chr1 155640109 . A . . LowGQX END=155640258 GT ./. chr1 155642349 . A . . LowGQX END=155642525 GT ./. chr1 155644795 . A . . LowGQX END=155644895 GT ./. chr1 155646337 . A . . LowGQX END=155646540 GT ./. chr1 155649046 . T . . LowGQX END=155649146 GT ./. chr1 155649198 . A . . LowGQX END=155649306 GT ./. chr1 155650178 . C . . LowGQX END=155650278 GT ./. chr1 155657860 . A . . LowGQX END=155658256 GT ./. chr1 155658635 . G . . LowGQX END=155658849 GT ./. chr1 155679544 . T . . LowGQX END=155679644 GT ./. chr1 155686795 . A . . LowGQX END=155686922 GT ./. chr1 155691306 . A . . LowGQX END=155691412 GT ./. chr1 155695171 . A . . LowGQX END=155695284 GT ./. chr1 155695715 . T . . LowGQX END=155695815 GT ./. chr1 155697397 . A . . LowGQX END=155697532 GT ./. chr1 155698824 . T . . LowGQX END=155698924 GT ./. chr1 155698997 . A . . LowGQX END=155699160 GT ./. chr1 155701127 . T . . LowGQX END=155701227 GT ./. chr1 155701730 . T . . LowGQX END=155701830 GT ./. chr1 155706685 . C . . LowGQX END=155706857 GT ./. chr1 155707941 . A . . LowGQX END=155708041 GT ./. chr1 155715559 . A . . LowGQX END=155715712 GT ./. chr1 155715755 . C . . LowGQX END=155715932 GT ./. chr1 155716335 . G . . LowGQX END=155716495 GT ./. chr1 155716544 . G . . LowGQX END=155716727 GT ./. chr1 155716897 . T . . LowGQX END=155716997 GT ./. chr1 155717019 . A . . LowGQX END=155717199 GT ./. chr1 155717353 . G . . LowGQX END=155717742 GT ./. chr1 155720363 . A . . LowGQX END=155720525 GT ./. chr1 155721557 . C . . LowGQX END=155721661 GT ./. chr1 155721750 . C . . LowGQX END=155722430 GT ./. chr1 155722994 . C . . LowGQX END=155723206 GT ./. chr1 155724077 . T . . LowGQX END=155724280 GT ./. chr1 155726748 . C . . LowGQX END=155726869 GT ./. chr1 155726970 . C . . LowGQX END=155727115 GT ./. chr1 155727669 . C . . LowGQX END=155727826 GT ./. chr1 155730234 . C . . LowGQX END=155730433 GT ./. chr1 155731980 . C . . LowGQX END=155732166 GT ./. chr1 155733102 . C . . LowGQX END=155733356 GT ./. chr1 155734623 . C . . LowGQX END=155736552 GT ./. chr1 155737165 . A . . LowGQX END=155737384 GT ./. chr1 155740807 . A . . LowGQX END=155741060 GT ./. chr1 155742806 . T . . LowGQX END=155743053 GT ./. chr1 155744730 . G . . LowGQX END=155745016 GT ./. chr1 155746135 . A . . LowGQX END=155746324 GT ./. chr1 155747362 . T . . LowGQX END=155747663 GT ./. chr1 155753726 . A . . LowGQX END=155753932 GT ./. chr1 155754960 . T . . LowGQX END=155755217 GT ./. chr1 155764790 . A . . LowGQX END=155764994 GT ./. chr1 155774689 . T . . LowGQX END=155774984 GT ./. chr1 155783374 . A . . LowGQX END=155783647 GT ./. chr1 155784070 . A . . LowGQX END=155784292 GT ./. chr1 155785545 . A . . LowGQX END=155785743 GT ./. chr1 155785952 . A . . LowGQX END=155786105 GT ./. chr1 155790282 . T . . LowGQX END=155790499 GT ./. chr1 155791212 . T . . LowGQX END=155791391 GT ./. chr1 155792026 . T . . LowGQX END=155792319 GT ./. chr1 155796577 . T . . LowGQX END=155796871 GT ./. chr1 155823016 . T . . LowGQX END=155823623 GT ./. chr1 155829520 . A . . LowGQX END=155829620 GT ./. chr1 155837754 . A . . LowGQX END=155838585 GT ./. chr1 155850289 . A . . LowGQX END=155850417 GT ./. chr1 155850987 . A . . LowGQX END=155851302 GT ./. chr1 155870177 . C . . LowGQX END=155870412 GT ./. chr1 155874100 . A . . LowGQX END=155874296 GT ./. chr1 155874509 . T . . LowGQX END=155874609 GT ./. chr1 155880220 . A . . LowGQX END=155880320 GT ./. chr1 155880445 . A . . LowGQX END=155880596 GT ./. chr1 155880623 . C . . LowGQX END=155880723 GT ./. chr1 155883910 . T . . LowGQX END=155884114 GT ./. chr1 155885613 . T . . LowGQX END=155885793 GT ./. chr1 155886414 . A . . LowGQX END=155886531 GT ./. chr1 155887277 . T . . LowGQX END=155887466 GT ./. chr1 155889700 . C . . LowGQX END=155889834 GT ./. chr1 155891164 . A . . LowGQX END=155891422 GT ./. chr1 155891631 . A . . LowGQX END=155891731 GT ./. chr1 155893399 . T . . LowGQX END=155893499 GT ./. chr1 155895421 . A . . LowGQX END=155895637 GT ./. chr1 155895749 . G . . LowGQX END=155895878 GT ./. chr1 155896422 . T . . LowGQX END=155896633 GT ./. chr1 155896872 . C . . LowGQX END=155896972 GT ./. chr1 155899077 . G . . LowGQX END=155899177 GT ./. chr1 155899501 . A . . LowGQX END=155899634 GT ./. chr1 155903422 . A . . LowGQX END=155903643 GT ./. chr1 155904096 . C . . LowGQX END=155904196 GT ./. chr1 155911499 . C . . LowGQX END=155912628 GT ./. chr1 155917120 . C . . LowGQX END=155917220 GT ./. chr1 155917720 . G . . LowGQX END=155917820 GT ./. chr1 155920060 . C . . LowGQX END=155920276 GT ./. chr1 155920618 . A . . LowGQX END=155921066 GT ./. chr1 155921250 . C . . LowGQX END=155921350 GT ./. chr1 155921500 . T . . LowGQX END=155921600 GT ./. chr1 155921694 . C . . LowGQX END=155921794 GT ./. chr1 155921905 . A . . LowGQX END=155922029 GT ./. chr1 155922417 . A . . LowGQX END=155922622 GT ./. chr1 155924677 . T . . LowGQX END=155924777 GT ./. chr1 155927502 . A . . LowGQX END=155927676 GT ./. chr1 155928100 . G . . LowGQX END=155928200 GT ./. chr1 155931450 . A . . LowGQX END=155931703 GT ./. chr1 155931894 . A . . LowGQX END=155932016 GT ./. chr1 155932382 . A . . LowGQX END=155932512 GT ./. chr1 155932722 . A . . LowGQX END=155932977 GT ./. chr1 155934777 . A . . LowGQX END=155934923 GT ./. chr1 155935092 . A . . LowGQX END=155935206 GT ./. chr1 155935370 . G . . LowGQX END=155935595 GT ./. chr1 155936189 . C . . LowGQX END=155936289 GT ./. chr1 155936595 . C . . LowGQX END=155936695 GT ./. chr1 155938945 . A . . LowGQX END=155939092 GT ./. chr1 155942029 . C . . LowGQX END=155942129 GT ./. chr1 155948077 . A . . LowGQX END=155948295 GT ./. chr1 155952895 . T . . LowGQX END=155952995 GT ./. chr1 155954155 . T . . LowGQX END=155954255 GT ./. chr1 155955105 . C . . LowGQX END=155955205 GT ./. chr1 155979279 . C . . LowGQX END=155979444 GT ./. chr1 155981590 . A . . LowGQX END=155981690 GT ./. chr1 155982289 . A . . LowGQX END=155982389 GT ./. chr1 155984731 . C . . LowGQX END=155984863 GT ./. chr1 155988045 . A . . LowGQX END=155988162 GT ./. chr1 155988993 . A . . LowGQX END=155989093 GT ./. chr1 155989802 . A . . LowGQX END=155989961 GT ./. chr1 155990658 . G . . LowGQX END=155990758 GT ./. chr1 156006767 . G . . LowGQX END=156006924 GT ./. chr1 156011274 . A . . LowGQX END=156011465 GT ./. chr1 156011661 . A . . LowGQX END=156011831 GT ./. chr1 156011936 . T . . LowGQX END=156012036 GT ./. chr1 156012563 . A . . LowGQX END=156012707 GT ./. chr1 156013716 . G . . LowGQX END=156014086 GT ./. chr1 156018290 . A . . LowGQX END=156018453 GT ./. chr1 156020080 . A . . LowGQX END=156020347 GT ./. chr1 156020828 . T . . LowGQX END=156021188 GT ./. chr1 156021495 . A . . LowGQX END=156021651 GT ./. chr1 156023383 . A . . LowGQX END=156023546 GT ./. chr1 156024635 . A . . LowGQX END=156024765 GT ./. chr1 156025052 . A . . LowGQX END=156025219 GT ./. chr1 156027764 . A . . LowGQX END=156027884 GT ./. chr1 156028068 . G . . LowGQX END=156028204 GT ./. chr1 156031164 . A . . LowGQX END=156031264 GT ./. chr1 156035700 . A . . LowGQX END=156035900 GT ./. chr1 156038059 . A . . LowGQX END=156038257 GT ./. chr1 156039453 . T . . LowGQX END=156039553 GT ./. chr1 156039909 . C . . LowGQX END=156040081 GT ./. chr1 156046364 . C . . LowGQX END=156047474 GT ./. chr1 156051265 . T . . LowGQX END=156051795 GT ./. chr1 156084659 . C . . LowGQX END=156085117 GT ./. chr1 156095895 . C . . LowGQX END=156096055 GT ./. chr1 156096336 . T . . LowGQX END=156096443 GT ./. chr1 156096541 . G . . LowGQX END=156096708 GT ./. chr1 156099609 . G . . LowGQX END=156099709 GT ./. chr1 156100357 . C . . LowGQX END=156100616 GT ./. chr1 156104143 . G . . LowGQX END=156104371 GT ./. chr1 156104545 . C . . LowGQX END=156104818 GT ./. chr1 156104927 . C . . LowGQX END=156105155 GT ./. chr1 156105641 . C . . LowGQX END=156106280 GT ./. chr1 156106661 . A . . LowGQX END=156107075 GT ./. chr1 156107394 . A . . LowGQX END=156107607 GT ./. chr1 156108228 . G . . LowGQX END=156108600 GT ./. chr1 156108820 . C . . LowGQX END=156108949 GT ./. chr1 156109486 . A . . LowGQX END=156109646 GT ./. chr1 156124319 . G . . LowGQX END=156124560 GT ./. chr1 156126154 . C . . LowGQX END=156126417 GT ./. chr1 156127810 . A . . LowGQX END=156127975 GT ./. chr1 156128128 . C . . LowGQX END=156128329 GT ./. chr1 156128459 . C . . LowGQX END=156128667 GT ./. chr1 156130183 . A . . LowGQX END=156130402 GT ./. chr1 156130645 . C . . LowGQX END=156130872 GT ./. chr1 156131086 . C . . LowGQX END=156131361 GT ./. chr1 156132684 . G . . LowGQX END=156132937 GT ./. chr1 156142566 . G . . LowGQX END=156142849 GT ./. chr1 156144562 . G . . LowGQX END=156144783 GT ./. chr1 156144826 . A . . LowGQX END=156145086 GT ./. chr1 156145296 . C . . LowGQX END=156145499 GT ./. chr1 156146145 . T . . LowGQX END=156146840 GT ./. chr1 156169637 . C . . LowGQX END=156170266 GT ./. chr1 156177653 . C . . LowGQX END=156177807 GT ./. chr1 156180029 . A . . LowGQX END=156180225 GT ./. chr1 156182805 . A . . LowGQX END=156182970 GT ./. chr1 156195347 . G . . LowGQX END=156195460 GT ./. chr1 156202109 . A . . LowGQX END=156202219 GT ./. chr1 156203417 . A . . LowGQX END=156203522 GT ./. chr1 156206077 . A . . LowGQX END=156206277 GT ./. chr1 156209316 . C . . LowGQX END=156209416 GT ./. chr1 156212005 . C . . LowGQX END=156212105 GT ./. chr1 156212314 . G . . LowGQX END=156212414 GT ./. chr1 156212538 . C . . LowGQX END=156212638 GT ./. chr1 156212822 . A . . LowGQX END=156212956 GT ./. chr1 156213650 . C . . LowGQX END=156214197 GT ./. chr1 156214479 . A . . LowGQX END=156214705 GT ./. chr1 156214931 . A . . LowGQX END=156215032 GT ./. chr1 156215324 . A . . LowGQX END=156215455 GT ./. chr1 156215571 . A . . LowGQX END=156216044 GT ./. chr1 156216448 . G . . LowGQX END=156216548 GT ./. chr1 156217748 . C . . LowGQX END=156217848 GT ./. chr1 156219528 . C . . LowGQX END=156219746 GT ./. chr1 156220370 . G . . LowGQX END=156220470 GT ./. chr1 156220647 . A . . LowGQX END=156220790 GT ./. chr1 156221182 . C . . LowGQX END=156221282 GT ./. chr1 156222201 . T . . LowGQX END=156222301 GT ./. chr1 156222708 . A . . LowGQX END=156222872 GT ./. chr1 156223220 . C . . LowGQX END=156223320 GT ./. chr1 156228764 . A . . LowGQX END=156228957 GT ./. chr1 156230170 . C . . LowGQX END=156230420 GT ./. chr1 156231112 . G . . LowGQX END=156231212 GT ./. chr1 156233184 . A . . LowGQX END=156233364 GT ./. chr1 156235570 . A . . LowGQX END=156236174 GT ./. chr1 156236330 . A . . LowGQX END=156236472 GT ./. chr1 156237259 . A . . LowGQX END=156237472 GT ./. chr1 156237891 . C . . LowGQX END=156237991 GT ./. chr1 156238079 . A . . LowGQX END=156238209 GT ./. chr1 156242101 . A . . LowGQX END=156242201 GT ./. chr1 156243147 . C . . LowGQX END=156243247 GT ./. chr1 156244383 . C . . LowGQX END=156244483 GT ./. chr1 156246874 . A . . LowGQX END=156247035 GT ./. chr1 156247714 . A . . LowGQX END=156247842 GT ./. chr1 156248725 . A . . LowGQX END=156248828 GT ./. chr1 156252385 . T . . LowGQX END=156252485 GT ./. chr1 156255016 . G . . LowGQX END=156255777 GT ./. chr1 156256049 . A . . LowGQX END=156256267 GT ./. chr1 156261174 . A . . LowGQX END=156261449 GT ./. chr1 156262802 . T . . LowGQX END=156263003 GT ./. chr1 156263109 . A . . LowGQX END=156263370 GT ./. chr1 156263446 . T . . LowGQX END=156263546 GT ./. chr1 156263807 . A . . LowGQX END=156264030 GT ./. chr1 156264154 . A . . LowGQX END=156264359 GT ./. chr1 156264548 . A . . LowGQX END=156264810 GT ./. chr1 156265315 . A . . LowGQX END=156265480 GT ./. chr1 156268559 . T . . LowGQX END=156268983 GT ./. chr1 156278988 . A . . LowGQX END=156279097 GT ./. chr1 156280347 . A . . LowGQX END=156280483 GT ./. chr1 156280739 . A . . LowGQX END=156280989 GT ./. chr1 156281830 . A . . LowGQX END=156282015 GT ./. chr1 156286948 . C . . LowGQX END=156287048 GT ./. chr1 156287204 . A . . LowGQX END=156287341 GT ./. chr1 156288657 . A . . LowGQX END=156288811 GT ./. chr1 156290628 . A . . LowGQX END=156290819 GT ./. chr1 156294761 . A . . LowGQX END=156294883 GT ./. chr1 156302822 . C . . LowGQX END=156303142 GT ./. chr1 156303336 . A . . LowGQX END=156303437 GT ./. chr1 156304486 . A . . LowGQX END=156304586 GT ./. chr1 156304635 . A . . LowGQX END=156304735 GT ./. chr1 156305599 . C . . LowGQX END=156305699 GT ./. chr1 156306830 . C . . LowGQX END=156307032 GT ./. chr1 156307911 . A . . LowGQX END=156308011 GT ./. chr1 156309516 . T . . LowGQX END=156309616 GT ./. chr1 156314369 . A . . LowGQX END=156314502 GT ./. chr1 156316557 . A . . LowGQX END=156316558 GT ./. chr1 156316559 . T . . LowGQX END=156316560;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 156316561 . G . . LowGQX . GT ./. chr1 156316562 . A . . LowGQX END=156316563;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 156316564 . C . . LowGQX . GT ./. chr1 156316565 . A . . LowGQX END=156316573;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 156316574 . A . . LowGQX . GT ./. chr1 156316575 . G . . LowGQX END=156316576;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 156316577 . A . . LowGQX END=156316578 GT ./. chr1 156316579 . T . . LowGQX END=156316581;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 156316582 . C . . LowGQX END=156316776 GT ./. chr1 156337535 . A . . LowGQX END=156337638 GT ./. chr1 156339039 . C . . LowGQX END=156339230 GT ./. chr1 156340899 . T . . LowGQX END=156341059 GT ./. chr1 156344327 . A . . LowGQX END=156344502 GT ./. chr1 156347090 . A . . LowGQX END=156347281 GT ./. chr1 156347779 . A . . LowGQX END=156348193 GT ./. chr1 156351106 . C . . LowGQX END=156351307 GT ./. chr1 156351595 . A . . LowGQX END=156351775 GT ./. chr1 156351857 . A . . LowGQX END=156352070 GT ./. chr1 156352537 . A . . LowGQX END=156352663 GT ./. chr1 156354193 . T . . LowGQX END=156354395 GT ./. chr1 156354553 . C . . LowGQX END=156354653 GT ./. chr1 156374251 . C . . LowGQX END=156374409 GT ./. chr1 156376870 . A . . LowGQX END=156376992 GT ./. chr1 156377261 . C . . LowGQX END=156377513 GT ./. chr1 156377632 . A . . LowGQX END=156377770 GT ./. chr1 156384444 . A . . LowGQX END=156384548 GT ./. chr1 156386547 . C . . LowGQX END=156386647 GT ./. chr1 156389963 . C . . LowGQX END=156390228 GT ./. chr1 156396568 . C . . LowGQX END=156396668 GT ./. chr1 156399142 . C . . LowGQX END=156399242 GT ./. chr1 156437333 . A . . LowGQX END=156437493 GT ./. chr1 156437776 . C . . LowGQX END=156438094 GT ./. chr1 156438570 . A . . LowGQX END=156438815 GT ./. chr1 156444867 . G . . LowGQX END=156445032 GT ./. chr1 156446247 . A . . LowGQX END=156446347 GT ./. chr1 156446791 . G . . LowGQX END=156446997 GT ./. chr1 156449061 . T . . LowGQX END=156449161 GT ./. chr1 156449306 . T . . LowGQX END=156449656 GT ./. chr1 156450434 . C . . LowGQX END=156450570 GT ./. chr1 156450624 . A . . LowGQX END=156450795 GT ./. chr1 156452227 . A . . LowGQX END=156452435 GT ./. chr1 156453008 . G . . LowGQX END=156453108 GT ./. chr1 156496276 . T . . LowGQX END=156496394 GT ./. chr1 156497742 . A . . LowGQX END=156497855 GT ./. chr1 156498299 . A . . LowGQX END=156498405 GT ./. chr1 156498706 . A . . LowGQX END=156498877 GT ./. chr1 156499895 . A . . LowGQX END=156500112 GT ./. chr1 156500946 . A . . LowGQX END=156501046 GT ./. chr1 156502770 . A . . LowGQX END=156502901 GT ./. chr1 156503511 . C . . LowGQX END=156503670 GT ./. chr1 156503799 . A . . LowGQX END=156503936 GT ./. chr1 156504291 . A . . LowGQX END=156504528 GT ./. chr1 156504888 . T . . LowGQX END=156505048 GT ./. chr1 156506971 . A . . LowGQX END=156507116 GT ./. chr1 156508599 . A . . LowGQX END=156508828 GT ./. chr1 156509164 . A . . LowGQX END=156509332 GT ./. chr1 156509628 . A . . LowGQX END=156509785 GT ./. chr1 156510498 . A . . LowGQX END=156510711 GT ./. chr1 156513758 . G . . LowGQX END=156513858 GT ./. chr1 156513930 . A . . LowGQX END=156514030 GT ./. chr1 156514173 . G . . LowGQX END=156514273 GT ./. chr1 156517863 . A . . LowGQX END=156518038 GT ./. chr1 156518138 . A . . LowGQX END=156518282 GT ./. chr1 156518371 . A . . LowGQX END=156518543 GT ./. chr1 156520049 . T . . LowGQX END=156520149 GT ./. chr1 156521495 . A . . LowGQX END=156521663 GT ./. chr1 156521764 . A . . LowGQX END=156521890 GT ./. chr1 156524025 . A . . LowGQX END=156524187 GT ./. chr1 156526302 . A . . LowGQX END=156526488 GT ./. chr1 156530720 . A . . LowGQX END=156530820 GT ./. chr1 156531598 . C . . LowGQX END=156531796 GT ./. chr1 156532369 . G . . LowGQX END=156532469 GT ./. chr1 156532924 . A . . LowGQX END=156533107 GT ./. chr1 156533343 . A . . LowGQX END=156533461 GT ./. chr1 156533533 . A . . LowGQX END=156533633 GT ./. chr1 156534396 . A . . LowGQX END=156534496 GT ./. chr1 156535808 . C . . LowGQX END=156535908 GT ./. chr1 156536180 . A . . LowGQX END=156536341 GT ./. chr1 156539162 . G . . LowGQX END=156539262 GT ./. chr1 156542254 . G . . LowGQX END=156542354 GT ./. chr1 156551156 . T . . LowGQX END=156551863 GT ./. chr1 156552022 . G . . LowGQX END=156552227 GT ./. chr1 156552833 . G . . LowGQX END=156552963 GT ./. chr1 156553079 . T . . LowGQX END=156553243 GT ./. chr1 156553588 . G . . LowGQX END=156553688 GT ./. chr1 156554668 . G . . LowGQX END=156554768 GT ./. chr1 156554916 . G . . LowGQX END=156555024 GT ./. chr1 156555504 . G . . LowGQX END=156555619 GT ./. chr1 156555739 . A . . LowGQX END=156555839 GT ./. chr1 156556252 . C . . LowGQX END=156556352 GT ./. chr1 156561499 . G . . LowGQX END=156561847 GT ./. chr1 156561891 . A . . LowGQX END=156562050 GT ./. chr1 156562155 . A . . LowGQX END=156562270 GT ./. chr1 156562347 . A . . LowGQX END=156562465 GT ./. chr1 156563198 . A . . LowGQX END=156563422 GT ./. chr1 156563672 . A . . LowGQX END=156563879 GT ./. chr1 156564778 . T . . LowGQX END=156565644 GT ./. chr1 156565849 . C . . LowGQX END=156565949 GT ./. chr1 156566175 . T . . LowGQX END=156566275 GT ./. chr1 156567601 . C . . LowGQX END=156567916 GT ./. chr1 156568016 . T . . LowGQX END=156568116 GT ./. chr1 156568200 . C . . LowGQX END=156568300 GT ./. chr1 156568697 . T . . LowGQX END=156568850 GT ./. chr1 156571166 . C . . LowGQX END=156571266 GT ./. chr1 156593276 . C . . LowGQX END=156593376 GT ./. chr1 156593597 . A . . LowGQX END=156593955 GT ./. chr1 156594141 . A . . LowGQX END=156594262 GT ./. chr1 156594380 . C . . LowGQX END=156594578 GT ./. chr1 156594881 . T . . LowGQX END=156595179 GT ./. chr1 156615843 . C . . LowGQX END=156615943 GT ./. chr1 156616591 . A . . LowGQX END=156616970 GT ./. chr1 156617298 . A . . LowGQX END=156617477 GT ./. chr1 156617612 . G . . LowGQX END=156617712 GT ./. chr1 156617773 . A . . LowGQX END=156617905 GT ./. chr1 156618358 . A . . LowGQX END=156618656 GT ./. chr1 156619652 . G . . LowGQX END=156619752 GT ./. chr1 156621246 . A . . LowGQX END=156621484 GT ./. chr1 156622038 . A . . LowGQX END=156622761 GT ./. chr1 156626012 . G . . LowGQX END=156626231 GT ./. chr1 156626728 . A . . LowGQX END=156626891 GT ./. chr1 156627405 . G . . LowGQX END=156627559 GT ./. chr1 156627917 . A . . LowGQX END=156628066 GT ./. chr1 156628333 . A . . LowGQX END=156628528 GT ./. chr1 156628767 . A . . LowGQX END=156628929 GT ./. chr1 156639112 . T . . LowGQX END=156643000 GT ./. chr1 156643233 . C . . LowGQX END=156643333 GT ./. chr1 156645006 . A . . LowGQX END=156645135 GT ./. chr1 156646261 . T . . LowGQX END=156647062 GT ./. chr1 156669794 . G . . LowGQX END=156669894 GT ./. chr1 156670332 . A . . LowGQX END=156670453 GT ./. chr1 156670664 . A . . LowGQX END=156670847 GT ./. chr1 156675154 . C . . LowGQX END=156675254 GT ./. chr1 156693139 . C . . LowGQX END=156693257 GT ./. chr1 156693938 . A . . LowGQX END=156694143 GT ./. chr1 156696696 . A . . LowGQX END=156697447 GT ./. chr1 156698895 . G . . LowGQX END=156699055 GT ./. chr1 156701781 . A . . LowGQX END=156701910 GT ./. chr1 156702071 . A . . LowGQX END=156702268 GT ./. chr1 156702759 . T . . LowGQX END=156702859 GT ./. chr1 156703167 . A . . LowGQX END=156703315 GT ./. chr1 156703799 . A . . LowGQX END=156704288 GT ./. chr1 156705515 . A . . LowGQX END=156705704 GT ./. chr1 156706422 . A . . LowGQX END=156706548 GT ./. chr1 156707188 . G . . LowGQX END=156707329 GT ./. chr1 156707436 . A . . LowGQX END=156707571 GT ./. chr1 156707821 . G . . LowGQX END=156707929 GT ./. chr1 156708133 . A . . LowGQX END=156708233 GT ./. chr1 156708292 . A . . LowGQX END=156708506 GT ./. chr1 156713135 . T . . LowGQX END=156713295 GT ./. chr1 156713368 . G . . LowGQX END=156713738 GT ./. chr1 156713953 . A . . LowGQX END=156714162 GT ./. chr1 156714218 . A . . LowGQX END=156714378 GT ./. chr1 156714798 . A . . LowGQX END=156714941 GT ./. chr1 156715078 . C . . LowGQX END=156715178 GT ./. chr1 156721073 . T . . LowGQX END=156721229 GT ./. chr1 156721813 . C . . LowGQX END=156721913 GT ./. chr1 156722020 . C . . LowGQX END=156722156 GT ./. chr1 156737562 . C . . LowGQX END=156738042 GT ./. chr1 156752048 . C . . LowGQX END=156752148 GT ./. chr1 156756398 . A . . LowGQX END=156756969 GT ./. chr1 156760797 . G . . LowGQX END=156760957 GT ./. chr1 156761487 . A . . LowGQX END=156761587 GT ./. chr1 156764455 . A . . LowGQX END=156764603 GT ./. chr1 156767051 . G . . LowGQX END=156767151 GT ./. chr1 156770160 . C . . LowGQX END=156770260 GT ./. chr1 156776947 . C . . LowGQX END=156777140 GT ./. chr1 156778993 . A . . LowGQX END=156779285 GT ./. chr1 156779451 . A . . LowGQX END=156779631 GT ./. chr1 156783638 . A . . LowGQX END=156783811 GT ./. chr1 156783995 . A . . LowGQX END=156784117 GT ./. chr1 156784827 . A . . LowGQX END=156785016 GT ./. chr1 156785571 . A . . LowGQX END=156785682 GT ./. chr1 156785793 . C . . LowGQX END=156785893 GT ./. chr1 156786374 . T . . LowGQX END=156786534 GT ./. chr1 156810663 . C . . LowGQX END=156810899 GT ./. chr1 156811184 . A . . LowGQX END=156811323 GT ./. chr1 156811455 . A . . LowGQX END=156811661 GT ./. chr1 156811822 . G . . LowGQX END=156812076 GT ./. chr1 156812188 . A . . LowGQX END=156812303 GT ./. chr1 156812794 . A . . LowGQX END=156813028 GT ./. chr1 156813136 . C . . LowGQX END=156813296 GT ./. chr1 156813965 . A . . LowGQX END=156814075 GT ./. chr1 156814252 . A . . LowGQX END=156814419 GT ./. chr1 156814497 . A . . LowGQX END=156814638 GT ./. chr1 156814866 . A . . LowGQX END=156815091 GT ./. chr1 156815135 . C . . LowGQX END=156815235 GT ./. chr1 156815399 . C . . LowGQX END=156815619 GT ./. chr1 156815731 . C . . LowGQX END=156815914 GT ./. chr1 156816309 . A . . LowGQX END=156816552 GT ./. chr1 156818711 . A . . LowGQX END=156818842 GT ./. chr1 156819036 . A . . LowGQX END=156819255 GT ./. chr1 156820974 . C . . LowGQX END=156821583 GT ./. chr1 156821678 . A . . LowGQX END=156821986 GT ./. chr1 156823542 . A . . LowGQX END=156824098 GT ./. chr1 156828322 . G . . LowGQX END=156828422 GT ./. chr1 156830676 . C . . LowGQX END=156830990 GT ./. chr1 156834095 . G . . LowGQX END=156834272 GT ./. chr1 156834469 . G . . LowGQX END=156834643 GT ./. chr1 156836651 . T . . LowGQX END=156836822 GT ./. chr1 156837845 . G . . LowGQX END=156838093 GT ./. chr1 156838246 . G . . LowGQX END=156838491 GT ./. chr1 156841364 . C . . LowGQX END=156841599 GT ./. chr1 156843374 . C . . LowGQX END=156843803 GT ./. chr1 156844094 . A . . LowGQX END=156844244 GT ./. chr1 156844312 . G . . LowGQX END=156844470 GT ./. chr1 156844647 . C . . LowGQX END=156844852 GT ./. chr1 156845261 . C . . LowGQX END=156845510 GT ./. chr1 156845817 . C . . LowGQX END=156846054 GT ./. chr1 156846141 . C . . LowGQX END=156846416 GT ./. chr1 156848863 . C . . LowGQX END=156849206 GT ./. chr1 156849740 . A . . LowGQX END=156850001 GT ./. chr1 156851198 . T . . LowGQX END=156851486 GT ./. chr1 156873717 . C . . LowGQX END=156873822 GT ./. chr1 156874538 . A . . LowGQX END=156874647 GT ./. chr1 156874699 . C . . LowGQX END=156874799 GT ./. chr1 156875063 . T . . LowGQX END=156875274 GT ./. chr1 156876065 . C . . LowGQX END=156876165 GT ./. chr1 156876427 . A . . LowGQX END=156876675 GT ./. chr1 156877400 . A . . LowGQX END=156877525 GT ./. chr1 156877705 . A . . LowGQX END=156877846 GT ./. chr1 156877918 . A . . LowGQX END=156878135 GT ./. chr1 156878445 . A . . LowGQX END=156878624 GT ./. chr1 156878706 . A . . LowGQX END=156878831 GT ./. chr1 156879541 . A . . LowGQX END=156879709 GT ./. chr1 156879796 . A . . LowGQX END=156879903 GT ./. chr1 156880024 . A . . LowGQX END=156880175 GT ./. chr1 156880408 . A . . LowGQX END=156880538 GT ./. chr1 156882037 . A . . LowGQX END=156882170 GT ./. chr1 156882284 . A . . LowGQX END=156882417 GT ./. chr1 156882560 . A . . LowGQX END=156882777 GT ./. chr1 156882981 . T . . LowGQX END=156883081 GT ./. chr1 156883181 . A . . LowGQX END=156883318 GT ./. chr1 156883469 . C . . LowGQX END=156883569 GT ./. chr1 156883642 . A . . LowGQX END=156883895 GT ./. chr1 156884437 . A . . LowGQX END=156884593 GT ./. chr1 156890595 . C . . LowGQX END=156890756 GT ./. chr1 156893740 . G . . LowGQX END=156893919 GT ./. chr1 156894215 . G . . LowGQX END=156894345 GT ./. chr1 156894423 . C . . LowGQX END=156894523 GT ./. chr1 156894719 . G . . LowGQX END=156894819 GT ./. chr1 156896978 . T . . LowGQX END=156897078 GT ./. chr1 156897287 . G . . LowGQX END=156897448 GT ./. chr1 156897517 . C . . LowGQX END=156897617 GT ./. chr1 156897702 . T . . LowGQX END=156897802 GT ./. chr1 156899071 . G . . LowGQX END=156899222 GT ./. chr1 156899425 . C . . LowGQX END=156899525 GT ./. chr1 156900315 . C . . LowGQX END=156900415 GT ./. chr1 156901705 . C . . LowGQX END=156901820 GT ./. chr1 156902215 . G . . LowGQX END=156902442 GT ./. chr1 156902644 . G . . LowGQX END=156902762 GT ./. chr1 156905772 . G . . LowGQX END=156905872 GT ./. chr1 156905923 . T . . LowGQX END=156906037 GT ./. chr1 156906606 . A . . LowGQX END=156906800 GT ./. chr1 156907028 . C . . LowGQX END=156907298 GT ./. chr1 156908208 . A . . LowGQX END=156908308 GT ./. chr1 156909328 . C . . LowGQX END=156909708 GT ./. chr1 156909997 . A . . LowGQX END=156910220 GT ./. chr1 156911145 . G . . LowGQX END=156911245 GT ./. chr1 156911654 . A . . LowGQX END=156911823 GT ./. chr1 156912478 . T . . LowGQX END=156912578 GT ./. chr1 156913725 . A . . LowGQX END=156913897 GT ./. chr1 156914138 . C . . LowGQX END=156914238 GT ./. chr1 156914809 . A . . LowGQX END=156914992 GT ./. chr1 156915835 . A . . LowGQX END=156915957 GT ./. chr1 156916452 . A . . LowGQX END=156916582 GT ./. chr1 156916718 . G . . LowGQX END=156916818 GT ./. chr1 156917094 . A . . LowGQX END=156917245 GT ./. chr1 156917559 . A . . LowGQX END=156917751 GT ./. chr1 156917947 . G . . LowGQX END=156918047 GT ./. chr1 156918109 . A . . LowGQX END=156918293 GT ./. chr1 156918341 . G . . LowGQX END=156918441 GT ./. chr1 156921363 . A . . LowGQX END=156921494 GT ./. chr1 156924592 . A . . LowGQX END=156924749 GT ./. chr1 156925493 . A . . LowGQX END=156925594 GT ./. chr1 156926210 . A . . LowGQX END=156926359 GT ./. chr1 156927546 . C . . LowGQX END=156927646 GT ./. chr1 156928532 . A . . LowGQX END=156928659 GT ./. chr1 156928836 . A . . LowGQX END=156928937 GT ./. chr1 156930182 . A . . LowGQX END=156930282 GT ./. chr1 156931467 . A . . LowGQX END=156931570 GT ./. chr1 156932993 . A . . LowGQX END=156933099 GT ./. chr1 156933300 . G . . LowGQX END=156933400 GT ./. chr1 156937737 . T . . LowGQX END=156937919 GT ./. chr1 156939063 . C . . LowGQX END=156939163 GT ./. chr1 156939763 . A . . LowGQX END=156939863 GT ./. chr1 156941487 . A . . LowGQX END=156941611 GT ./. chr1 156946761 . G . . LowGQX END=156946861 GT ./. chr1 156947974 . A . . LowGQX END=156948177 GT ./. chr1 156949000 . T . . LowGQX END=156949100 GT ./. chr1 156950204 . G . . LowGQX END=156950304 GT ./. chr1 156954129 . A . . LowGQX END=156954232 GT ./. chr1 156955870 . T . . LowGQX END=156955970 GT ./. chr1 157014057 . C . . LowGQX END=157014157 GT ./. chr1 157062439 . A . . LowGQX END=157062922 GT ./. chr1 157067617 . C . . LowGQX END=157067783 GT ./. chr1 157068496 . A . . LowGQX END=157068690 GT ./. chr1 157068931 . A . . LowGQX END=157069173 GT ./. chr1 157069237 . A . . LowGQX END=157069337 GT ./. chr1 157094632 . T . . LowGQX END=157095772 GT ./. chr1 157103870 . A . . LowGQX END=157104022 GT ./. chr1 157105261 . A . . LowGQX END=157105503 GT ./. chr1 157106007 . G . . LowGQX END=157106172 GT ./. chr1 157485391 . T . . LowGQX END=157485557 GT ./. chr1 157485598 . G . . LowGQX END=157485698 GT ./. chr1 157488204 . A . . LowGQX END=157488304 GT ./. chr1 157488482 . G . . LowGQX END=157488582 GT ./. chr1 157489497 . T . . LowGQX END=157489597 GT ./. chr1 157490219 . A . . LowGQX END=157490340 GT ./. chr1 157490805 . A . . LowGQX END=157491085 GT ./. chr1 157494027 . G . . LowGQX END=157494350 GT ./. chr1 157497405 . A . . LowGQX END=157497688 GT ./. chr1 157504057 . G . . LowGQX END=157504157 GT ./. chr1 157504305 . A . . LowGQX END=157504685 GT ./. chr1 157508874 . A . . LowGQX END=157509157 GT ./. chr1 157512647 . A . . LowGQX END=157512930 GT ./. chr1 157514050 . A . . LowGQX END=157514339 GT ./. chr1 157514609 . T . . LowGQX END=157514879 GT ./. chr1 157515987 . C . . LowGQX END=157516087 GT ./. chr1 157516731 . A . . LowGQX END=157516990 GT ./. chr1 157517125 . A . . LowGQX END=157517225 GT ./. chr1 157519311 . A . . LowGQX END=157519411 GT ./. chr1 157522088 . C . . LowGQX END=157522188 GT ./. chr1 157545308 . A . . LowGQX END=157545408 GT ./. chr1 157545455 . G . . LowGQX END=157545555 GT ./. chr1 157548249 . T . . LowGQX END=157548349 GT ./. chr1 157548492 . C . . LowGQX END=157548652 GT ./. chr1 157550075 . G . . LowGQX END=157550175 GT ./. chr1 157551319 . A . . LowGQX END=157551437 GT ./. chr1 157555956 . A . . LowGQX END=157556248 GT ./. chr1 157557064 . A . . LowGQX END=157557353 GT ./. chr1 157557653 . A . . LowGQX END=157557912 GT ./. chr1 157558992 . A . . LowGQX END=157559251 GT ./. chr1 157566079 . A . . LowGQX END=157566179 GT ./. chr1 157567670 . T . . LowGQX END=157567770 GT ./. chr1 157646480 . A . . LowGQX END=157646580 GT ./. chr1 157648498 . G . . LowGQX END=157648649 GT ./. chr1 157648698 . C . . LowGQX END=157648798 GT ./. chr1 157650477 . T . . LowGQX END=157650577 GT ./. chr1 157650769 . A . . LowGQX END=157650892 GT ./. chr1 157652971 . T . . LowGQX END=157653071 GT ./. chr1 157659586 . A . . LowGQX END=157659710 GT ./. chr1 157660043 . A . . LowGQX END=157660326 GT ./. chr1 157665117 . A . . LowGQX END=157665416 GT ./. chr1 157665828 . A . . LowGQX END=157666140 GT ./. chr1 157666928 . A . . LowGQX END=157667217 GT ./. chr1 157667447 . A . . LowGQX END=157667712 GT ./. chr1 157668172 . A . . LowGQX END=157668422 GT ./. chr1 157669443 . A . . LowGQX END=157669543 GT ./. chr1 157670215 . G . . LowGQX END=157670315 GT ./. chr1 157716496 . G . . LowGQX END=157716596 GT ./. chr1 157716626 . G . . LowGQX END=157716726 GT ./. chr1 157718326 . A . . LowGQX END=157718426 GT ./. chr1 157718658 . C . . LowGQX END=157718758 GT ./. chr1 157719404 . T . . LowGQX END=157719504 GT ./. chr1 157736585 . T . . LowGQX END=157736764 GT ./. chr1 157737019 . A . . LowGQX END=157737426 GT ./. chr1 157738202 . A . . LowGQX END=157738494 GT ./. chr1 157739642 . T . . LowGQX END=157739943 GT ./. chr1 157740197 . A . . LowGQX END=157740459 GT ./. chr1 157744188 . G . . LowGQX END=157744288 GT ./. chr1 157745526 . T . . LowGQX END=157745626 GT ./. chr1 157746799 . C . . LowGQX END=157746899 GT ./. chr1 157765875 . A . . LowGQX END=157765975 GT ./. chr1 157766857 . A . . LowGQX END=157766957 GT ./. chr1 157767530 . T . . LowGQX END=157767630 GT ./. chr1 157767644 . C . . LowGQX END=157767744 GT ./. chr1 157767943 . A . . LowGQX END=157768043 GT ./. chr1 157769812 . T . . LowGQX END=157769912 GT ./. chr1 157771249 . A . . LowGQX END=157771370 GT ./. chr1 157771703 . A . . LowGQX END=157771986 GT ./. chr1 157772165 . A . . LowGQX END=157772457 GT ./. chr1 157773633 . A . . LowGQX END=157773904 GT ./. chr1 157776853 . A . . LowGQX END=157776953 GT ./. chr1 157789763 . C . . LowGQX END=157789863 GT ./. chr1 157801707 . A . . LowGQX END=157801807 GT ./. chr1 157802980 . A . . LowGQX END=157803305 GT ./. chr1 157804195 . A . . LowGQX END=157804541 GT ./. chr1 157805623 . A . . LowGQX END=157805948 GT ./. chr1 157809082 . T . . LowGQX END=157809238 GT ./. chr1 157811428 . T . . LowGQX END=157811528 GT ./. chr1 157963383 . C . . LowGQX END=157963543 GT ./. chr1 158045902 . G . . LowGQX END=158046055 GT ./. chr1 158047779 . A . . LowGQX END=158047933 GT ./. chr1 158054211 . G . . LowGQX END=158054370 GT ./. chr1 158056385 . G . . LowGQX END=158056537 GT ./. chr1 158057543 . A . . LowGQX END=158057653 GT ./. chr1 158057794 . A . . LowGQX END=158057947 GT ./. chr1 158058115 . A . . LowGQX END=158058247 GT ./. chr1 158059223 . G . . LowGQX END=158059421 GT ./. chr1 158059506 . A . . LowGQX END=158059611 GT ./. chr1 158061146 . A . . LowGQX END=158061349 GT ./. chr1 158063127 . A . . LowGQX END=158063239 GT ./. chr1 158063411 . A . . LowGQX END=158063555 GT ./. chr1 158064092 . C . . LowGQX END=158064192 GT ./. chr1 158064432 . A . . LowGQX END=158064913 GT ./. chr1 158066316 . A . . LowGQX END=158066943 GT ./. chr1 158150873 . G . . LowGQX END=158150973 GT ./. chr1 158151243 . A . . LowGQX END=158151514 GT ./. chr1 158151820 . A . . LowGQX END=158152229 GT ./. chr1 158152666 . A . . LowGQX END=158152949 GT ./. chr1 158153724 . A . . LowGQX END=158153828 GT ./. chr1 158153880 . C . . LowGQX END=158153980 GT ./. chr1 158224439 . G . . LowGQX END=158224539 GT ./. chr1 158224872 . A . . LowGQX END=158225143 GT ./. chr1 158225792 . A . . LowGQX END=158226075 GT ./. chr1 158226574 . A . . LowGQX END=158226857 GT ./. chr1 158227207 . A . . LowGQX END=158227307 GT ./. chr1 158227426 . A . . LowGQX END=158227526 GT ./. chr1 158259836 . A . . LowGQX END=158259936 GT ./. chr1 158260922 . A . . LowGQX END=158261193 GT ./. chr1 158261872 . A . . LowGQX END=158262158 GT ./. chr1 158262384 . A . . LowGQX END=158262667 GT ./. chr1 158262998 . G . . LowGQX END=158263098 GT ./. chr1 158263243 . A . . LowGQX END=158263397 GT ./. chr1 158297987 . G . . LowGQX END=158298087 GT ./. chr1 158298708 . C . . LowGQX END=158298808 GT ./. chr1 158299158 . A . . LowGQX END=158299441 GT ./. chr1 158299640 . A . . LowGQX END=158299923 GT ./. chr1 158300329 . T . . LowGQX END=158300855 GT ./. chr1 158301134 . C . . LowGQX END=158301234 GT ./. chr1 158323241 . C . . LowGQX END=158323341 GT ./. chr1 158323758 . C . . LowGQX END=158323858 GT ./. chr1 158324165 . A . . LowGQX END=158324466 GT ./. chr1 158325088 . A . . LowGQX END=158325362 GT ./. chr1 158325615 . A . . LowGQX END=158326021 GT ./. chr1 158326285 . C . . LowGQX END=158326385 GT ./. chr1 158326516 . A . . LowGQX END=158326689 GT ./. chr1 158368310 . T . . LowGQX END=158369259 GT ./. chr1 158389716 . T . . LowGQX END=158390659 GT ./. chr1 158435350 . C . . LowGQX END=158436298 GT ./. chr1 158449666 . G . . LowGQX END=158450678 GT ./. chr1 158507135 . T . . LowGQX END=158507235 GT ./. chr1 158516916 . T . . LowGQX END=158517898 GT ./. chr1 158532430 . C . . LowGQX END=158533395 GT ./. chr1 158548707 . G . . LowGQX END=158549692 GT ./. chr1 158565261 . A . . LowGQX END=158565361 GT ./. chr1 158576227 . G . . LowGQX END=158577173 GT ./. chr1 158581003 . G . . LowGQX END=158581231 GT ./. chr1 158582556 . A . . LowGQX END=158582803 GT ./. chr1 158583460 . C . . LowGQX END=158583709 GT ./. chr1 158583992 . T . . LowGQX END=158584148 GT ./. chr1 158584955 . C . . LowGQX END=158585245 GT ./. chr1 158587276 . A . . LowGQX END=158587430 GT ./. chr1 158587778 . C . . LowGQX END=158587898 GT ./. chr1 158588961 . G . . LowGQX END=158589176 GT ./. chr1 158589909 . G . . LowGQX END=158590308 GT ./. chr1 158592722 . G . . LowGQX END=158593034 GT ./. chr1 158595885 . A . . LowGQX END=158596064 GT ./. chr1 158596578 . A . . LowGQX END=158596849 GT ./. chr1 158597364 . A . . LowGQX END=158597565 GT ./. chr1 158604282 . A . . LowGQX END=158604517 GT ./. chr1 158605652 . C . . LowGQX END=158605876 GT ./. chr1 158606380 . G . . LowGQX END=158606603 GT ./. chr1 158607772 . A . . LowGQX END=158608083 GT ./. chr1 158609321 . C . . LowGQX END=158609528 GT ./. chr1 158609609 . G . . LowGQX END=158609849 GT ./. chr1 158612150 . A . . LowGQX END=158612384 GT ./. chr1 158612553 . C . . LowGQX END=158612818 GT ./. chr1 158613061 . T . . LowGQX END=158613267 GT ./. chr1 158613992 . G . . LowGQX END=158614238 GT ./. chr1 158614927 . T . . LowGQX END=158615227 GT ./. chr1 158615234 . A . . LowGQX END=158615436 GT ./. chr1 158617278 . C . . LowGQX END=158617562 GT ./. chr1 158618248 . G . . LowGQX END=158618495 GT ./. chr1 158619595 . T . . LowGQX END=158619789 GT ./. chr1 158621106 . C . . LowGQX END=158621310 GT ./. chr1 158622206 . G . . LowGQX END=158622495 GT ./. chr1 158623013 . C . . LowGQX END=158623267 GT ./. chr1 158624350 . A . . LowGQX END=158624590 GT ./. chr1 158626303 . T . . LowGQX END=158626498 GT ./. chr1 158627216 . T . . LowGQX END=158627536 GT ./. chr1 158631026 . A . . LowGQX END=158631251 GT ./. chr1 158632441 . T . . LowGQX END=158632787 GT ./. chr1 158636055 . C . . LowGQX END=158636339 GT ./. chr1 158637597 . T . . LowGQX END=158637904 GT ./. chr1 158639147 . A . . LowGQX END=158639405 GT ./. chr1 158639448 . T . . LowGQX END=158639628 GT ./. chr1 158641082 . A . . LowGQX END=158641295 GT ./. chr1 158641798 . T . . LowGQX END=158641972;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 158641973 . T . . LowGQX END=158642038 GT ./. chr1 158644068 . A . . LowGQX END=158644272 GT ./. chr1 158644279 . T . . LowGQX END=158644517 GT ./. chr1 158645880 . A . . LowGQX END=158646137 GT ./. chr1 158647429 . A . . LowGQX END=158647676 GT ./. chr1 158648140 . T . . LowGQX END=158648376 GT ./. chr1 158650322 . C . . LowGQX END=158650571 GT ./. chr1 158651266 . T . . LowGQX END=158651509 GT ./. chr1 158653110 . C . . LowGQX END=158653338 GT ./. chr1 158654847 . T . . LowGQX END=158655189 GT ./. chr1 158656233 . T . . LowGQX END=158656366 GT ./. chr1 158669466 . A . . LowGQX END=158670445 GT ./. chr1 158686956 . T . . LowGQX END=158687956 GT ./. chr1 158724604 . G . . LowGQX END=158725640 GT ./. chr1 158735532 . A . . LowGQX END=158736475 GT ./. chr1 158746470 . A . . LowGQX END=158747428 GT ./. chr1 158811942 . A . . LowGQX END=158812211 GT ./. chr1 158813067 . A . . LowGQX END=158813208 GT ./. chr1 158813743 . A . . LowGQX END=158813915 GT ./. chr1 158815375 . A . . LowGQX END=158815796 GT ./. chr1 158817516 . A . . LowGQX END=158817709 GT ./. chr1 158818954 . T . . LowGQX END=158819054 GT ./. chr1 158906699 . A . . LowGQX END=158906968 GT ./. chr1 158908185 . A . . LowGQX END=158908335 GT ./. chr1 158908868 . A . . LowGQX END=158909040 GT ./. chr1 158909192 . G . . LowGQX END=158909352 GT ./. chr1 158911765 . A . . LowGQX END=158912192 GT ./. chr1 158913578 . A . . LowGQX END=158913771 GT ./. chr1 158914663 . A . . LowGQX END=158914835 GT ./. chr1 158943435 . A . . LowGQX END=158943559 GT ./. chr1 158946455 . C . . LowGQX END=158946555 GT ./. chr1 158984458 . T . . LowGQX END=158984738 GT ./. chr1 158985660 . A . . LowGQX END=158985780 GT ./. chr1 158986321 . A . . LowGQX END=158986493 GT ./. chr1 158988017 . A . . LowGQX END=158988444 GT ./. chr1 158990119 . T . . LowGQX END=158990322 GT ./. chr1 159002312 . A . . LowGQX END=159002484 GT ./. chr1 159015054 . A . . LowGQX END=159015257 GT ./. chr1 159019190 . G . . LowGQX END=159019390 GT ./. chr1 159021467 . A . . LowGQX END=159021891 GT ./. chr1 159023321 . A . . LowGQX END=159023517 GT ./. chr1 159024602 . T . . LowGQX END=159024702 GT ./. chr1 159032446 . T . . LowGQX END=159032546 GT ./. chr1 159033274 . A . . LowGQX END=159033467 GT ./. chr1 159035698 . A . . LowGQX END=159036122 GT ./. chr1 159038356 . A . . LowGQX END=159038536 GT ./. chr1 159043026 . A . . LowGQX END=159043292 GT ./. chr1 159141550 . A . . LowGQX END=159141703 GT ./. chr1 159159509 . A . . LowGQX END=159159665 GT ./. chr1 159161724 . A . . LowGQX END=159161869 GT ./. chr1 159162306 . T . . LowGQX END=159162523 GT ./. chr1 159163211 . A . . LowGQX END=159163545 GT ./. chr1 159163658 . A . . LowGQX END=159163833 GT ./. chr1 159166150 . A . . LowGQX END=159166250 GT ./. chr1 159166679 . A . . LowGQX END=159166853 GT ./. chr1 159169539 . A . . LowGQX END=159169669 GT ./. chr1 159170592 . A . . LowGQX END=159170715 GT ./. chr1 159174651 . A . . LowGQX END=159174811 GT ./. chr1 159175223 . G . . LowGQX END=159176243 GT ./. chr1 159272133 . G . . LowGQX END=159272233 GT ./. chr1 159272605 . A . . LowGQX END=159272705 GT ./. chr1 159273716 . A . . LowGQX END=159273975 GT ./. chr1 159275776 . A . . LowGQX END=159276038 GT ./. chr1 159277536 . A . . LowGQX END=159277725 GT ./. chr1 159283458 . A . . LowGQX END=159284452 GT ./. chr1 159409547 . T . . LowGQX END=159410514 GT ./. chr1 159504866 . C . . LowGQX END=159505800 GT ./. chr1 159557694 . C . . LowGQX END=159557794 GT ./. chr1 159557889 . A . . LowGQX END=159558501 GT ./. chr1 159683313 . C . . LowGQX END=159683931 GT ./. chr1 159684196 . A . . LowGQX END=159684296 GT ./. chr1 159750878 . C . . LowGQX END=159751160 GT ./. chr1 159751941 . A . . LowGQX END=159752131 GT ./. chr1 159770346 . A . . LowGQX END=159770446 GT ./. chr1 159772179 . G . . LowGQX END=159772279 GT ./. chr1 159776347 . T . . LowGQX END=159776447 GT ./. chr1 159777966 . A . . LowGQX END=159778306 GT ./. chr1 159778749 . A . . LowGQX END=159779038 GT ./. chr1 159779190 . A . . LowGQX END=159779476 GT ./. chr1 159779882 . A . . LowGQX END=159780009 GT ./. chr1 159783262 . G . . LowGQX END=159783362 GT ./. chr1 159783997 . A . . LowGQX END=159784097 GT ./. chr1 159785184 . A . . LowGQX END=159785284 GT ./. chr1 159785324 . A . . LowGQX END=159785454 GT ./. chr1 159796607 . C . . LowGQX END=159796759 GT ./. chr1 159799654 . A . . LowGQX END=159799985 GT ./. chr1 159802664 . A . . LowGQX END=159802974 GT ./. chr1 159803050 . A . . LowGQX END=159803162 GT ./. chr1 159804963 . G . . LowGQX END=159805063 GT ./. chr1 159807707 . C . . LowGQX END=159807818 GT ./. chr1 159810500 . C . . LowGQX END=159810657 GT ./. chr1 159810915 . C . . LowGQX END=159811026 GT ./. chr1 159824530 . C . . LowGQX END=159824820 GT ./. chr1 159824947 . T . . LowGQX END=159825047 GT ./. chr1 159825671 . A . . LowGQX END=159825874 GT ./. chr1 159826312 . A . . LowGQX END=159826436 GT ./. chr1 159827533 . A . . LowGQX END=159827759 GT ./. chr1 159827878 . A . . LowGQX END=159828084 GT ./. chr1 159828522 . A . . LowGQX END=159828705 GT ./. chr1 159832238 . C . . LowGQX END=159832338 GT ./. chr1 159842265 . A . . LowGQX END=159842365 GT ./. chr1 159842732 . A . . LowGQX END=159842961 GT ./. chr1 159846344 . A . . LowGQX END=159846580 GT ./. chr1 159847137 . A . . LowGQX END=159847255 GT ./. chr1 159850342 . A . . LowGQX END=159850493 GT ./. chr1 159854224 . A . . LowGQX END=159854358 GT ./. chr1 159856299 . A . . LowGQX END=159856482 GT ./. chr1 159857629 . A . . LowGQX END=159857804 GT ./. chr1 159858140 . A . . LowGQX END=159858289 GT ./. chr1 159860268 . A . . LowGQX END=159860415 GT ./. chr1 159862968 . A . . LowGQX END=159863098 GT ./. chr1 159869838 . C . . LowGQX END=159869938 GT ./. chr1 159888588 . G . . LowGQX END=159888734 GT ./. chr1 159889062 . A . . LowGQX END=159889169 GT ./. chr1 159889449 . A . . LowGQX END=159889628 GT ./. chr1 159889895 . T . . LowGQX END=159890328 GT ./. chr1 159893193 . C . . LowGQX END=159893293 GT ./. chr1 159897113 . C . . LowGQX END=159897125;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:5:6:60 chr1 159897126 rs13052 C T 50.52 PASS BaseQRankSum=0.731;DP=5;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;MQ=60;MQ0=0;MQRankSum=-0.731;QD=10.10;ReadPosRankSum=0.731;SB=-69.85;TI=NM_020789,NM_001135050;GI=IGSF9,IGSF9;FC=Silent,Silent;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1,4:5:30.98:81,0,31:60:31:0.800 chr1 159897127 . A . . LowGQX END=159897141;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:6:60 chr1 159897142 . A . . LowGQX END=159897167;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 159897168 . T . . LowGQX END=159897188 GT ./. chr1 159897189 . C . . LowGQX END=159897319;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 159897548 . A . . LowGQX END=159897680 GT ./. chr1 159897946 . A . . LowGQX END=159898811 GT ./. chr1 159899053 . C . . LowGQX END=159899213 GT ./. chr1 159899426 . A . . LowGQX END=159899607 GT ./. chr1 159899674 . T . . LowGQX END=159899774 GT ./. chr1 159899977 . A . . LowGQX END=159900232 GT ./. chr1 159900460 . T . . LowGQX END=159900660 GT ./. chr1 159900926 . A . . LowGQX END=159901054 GT ./. chr1 159901241 . A . . LowGQX END=159901396 GT ./. chr1 159901600 . A . . LowGQX END=159901770 GT ./. chr1 159902260 . G . . LowGQX END=159902445 GT ./. chr1 159903937 . A . . LowGQX END=159904123 GT ./. chr1 159904213 . A . . LowGQX END=159904363 GT ./. chr1 159904469 . A . . LowGQX END=159904615 GT ./. chr1 159906145 . T . . LowGQX END=159906309 GT ./. chr1 159906542 . A . . LowGQX END=159906701 GT ./. chr1 159907474 . A . . LowGQX END=159907631 GT ./. chr1 159912741 . G . . LowGQX END=159912944 GT ./. chr1 159913166 . G . . LowGQX END=159913266 GT ./. chr1 159921449 . A . . LowGQX END=159921659 GT ./. chr1 159922050 . A . . LowGQX END=159922327 GT ./. chr1 159923097 . A . . LowGQX END=159923446 GT ./. chr1 159923855 . T . . LowGQX END=159923955 GT ./. chr1 160000207 . C . . LowGQX END=160001581 GT ./. chr1 160011132 . A . . LowGQX END=160012374 GT ./. chr1 160053819 . C . . LowGQX END=160054673 GT ./. chr1 160057274 . A . . LowGQX END=160057610 GT ./. chr1 160061611 . G . . LowGQX END=160061731 GT ./. chr1 160062059 . G . . LowGQX END=160062489 GT ./. chr1 160062712 . A . . LowGQX END=160063124 GT ./. chr1 160063498 . A . . LowGQX END=160063964 GT ./. chr1 160064657 . A . . LowGQX END=160065039 GT ./. chr1 160068181 . A . . LowGQX END=160068281 GT ./. chr1 160083261 . T . . LowGQX END=160083361 GT ./. chr1 160085601 . A . . LowGQX END=160085715 GT ./. chr1 160090645 . G . . LowGQX END=160090852 GT ./. chr1 160090922 . G . . LowGQX END=160091093 GT ./. chr1 160092952 . G . . LowGQX END=160093258 GT ./. chr1 160093682 . C . . LowGQX END=160093898 GT ./. chr1 160094025 . G . . LowGQX END=160094272 GT ./. chr1 160094875 . G . . LowGQX END=160095095 GT ./. chr1 160097291 . C . . LowGQX END=160097662 GT ./. chr1 160098185 . T . . LowGQX END=160098313 GT ./. chr1 160098352 . G . . LowGQX END=160098931 GT ./. chr1 160099005 . T . . LowGQX END=160099242 GT ./. chr1 160099841 . C . . LowGQX END=160100133 GT ./. chr1 160100161 . G . . LowGQX END=160100439 GT ./. chr1 160104223 . G . . LowGQX END=160104462 GT ./. chr1 160104884 . G . . LowGQX END=160105137 GT ./. chr1 160105173 . G . . LowGQX END=160105444 GT ./. chr1 160105578 . G . . LowGQX END=160105835 GT ./. chr1 160105986 . C . . LowGQX END=160106212 GT ./. chr1 160106309 . C . . LowGQX END=160106557 GT ./. chr1 160106640 . C . . LowGQX END=160106874 GT ./. chr1 160109379 . T . . LowGQX END=160109583 GT ./. chr1 160109632 . G . . LowGQX END=160109826 GT ./. chr1 160111008 . C . . LowGQX END=160111164 GT ./. chr1 160121829 . C . . LowGQX END=160121980 GT ./. chr1 160122935 . T . . LowGQX END=160123035 GT ./. chr1 160124833 . A . . LowGQX END=160125041 GT ./. chr1 160125833 . A . . LowGQX END=160125951 GT ./. chr1 160128790 . A . . LowGQX END=160128929 GT ./. chr1 160129197 . A . . LowGQX END=160129319 GT ./. chr1 160133944 . A . . LowGQX END=160134217 GT ./. chr1 160136316 . A . . LowGQX END=160136519 GT ./. chr1 160136756 . A . . LowGQX END=160136870 GT ./. chr1 160137066 . A . . LowGQX END=160137266 GT ./. chr1 160141039 . A . . LowGQX END=160141233 GT ./. chr1 160141373 . A . . LowGQX END=160141550 GT ./. chr1 160143369 . A . . LowGQX END=160143510 GT ./. chr1 160143899 . A . . LowGQX END=160144054 GT ./. chr1 160144367 . A . . LowGQX END=160144540 GT ./. chr1 160145880 . A . . LowGQX END=160146039 GT ./. chr1 160146267 . A . . LowGQX END=160146395 GT ./. chr1 160147307 . A . . LowGQX END=160147457 GT ./. chr1 160151472 . A . . LowGQX END=160151607 GT ./. chr1 160151718 . A . . LowGQX END=160151824 GT ./. chr1 160156002 . C . . LowGQX END=160156162 GT ./. chr1 160156426 . T . . LowGQX END=160156526 GT ./. chr1 160160541 . C . . LowGQX END=160160823 GT ./. chr1 160162585 . C . . LowGQX END=160162685 GT ./. chr1 160163529 . C . . LowGQX END=160163689 GT ./. chr1 160164800 . A . . LowGQX END=160164916 GT ./. chr1 160165238 . T . . LowGQX END=160165338 GT ./. chr1 160165685 . A . . LowGQX END=160165820 GT ./. chr1 160167332 . T . . LowGQX END=160167432 GT ./. chr1 160168445 . T . . LowGQX END=160168545 GT ./. chr1 160168741 . A . . LowGQX END=160168846 GT ./. chr1 160169629 . A . . LowGQX END=160169729 GT ./. chr1 160171033 . A . . LowGQX END=160171169 GT ./. chr1 160178375 . T . . LowGQX END=160178475 GT ./. chr1 160181332 . G . . LowGQX END=160181509 GT ./. chr1 160182898 . A . . LowGQX END=160183058 GT ./. chr1 160183195 . T . . LowGQX END=160183295 GT ./. chr1 160187380 . C . . LowGQX END=160187501 GT ./. chr1 160188112 . A . . LowGQX END=160188233 GT ./. chr1 160188637 . A . . LowGQX END=160188761 GT ./. chr1 160192439 . A . . LowGQX END=160192574 GT ./. chr1 160194230 . A . . LowGQX END=160194342 GT ./. chr1 160194771 . G . . LowGQX END=160194931 GT ./. chr1 160195368 . T . . LowGQX END=160195468 GT ./. chr1 160201085 . A . . LowGQX END=160201200 GT ./. chr1 160206923 . A . . LowGQX END=160207023 GT ./. chr1 160208395 . A . . LowGQX END=160208540 GT ./. chr1 160209388 . C . . LowGQX END=160210163 GT ./. chr1 160213737 . T . . LowGQX END=160213837 GT ./. chr1 160233044 . T . . LowGQX END=160233253 GT ./. chr1 160246598 . C . . LowGQX END=160249476 GT ./. chr1 160249528 . A . . LowGQX END=160249687 GT ./. chr1 160249809 . A . . LowGQX END=160250088 GT ./. chr1 160251778 . G . . LowGQX END=160252042 GT ./. chr1 160252156 . A . . LowGQX END=160252344 GT ./. chr1 160252683 . A . . LowGQX END=160252951 GT ./. chr1 160253269 . A . . LowGQX END=160253481 GT ./. chr1 160253876 . C . . LowGQX END=160253976 GT ./. chr1 160254794 . A . . LowGQX END=160254966 GT ./. chr1 160259927 . C . . LowGQX END=160260027 GT ./. chr1 160260280 . A . . LowGQX END=160260479 GT ./. chr1 160261123 . A . . LowGQX END=160261289 GT ./. chr1 160261607 . A . . LowGQX END=160261722 GT ./. chr1 160261800 . A . . LowGQX END=160261991 GT ./. chr1 160262212 . C . . LowGQX END=160262413 GT ./. chr1 160262941 . G . . LowGQX END=160263041 GT ./. chr1 160263104 . A . . LowGQX END=160263265 GT ./. chr1 160264272 . A . . LowGQX END=160264386 GT ./. chr1 160264553 . T . . LowGQX END=160264653 GT ./. chr1 160265524 . A . . LowGQX END=160265652 GT ./. chr1 160265846 . C . . LowGQX END=160265946 GT ./. chr1 160267131 . A . . LowGQX END=160267231 GT ./. chr1 160267344 . A . . LowGQX END=160267538 GT ./. chr1 160268633 . A . . LowGQX END=160268784 GT ./. chr1 160268890 . A . . LowGQX END=160269057 GT ./. chr1 160275221 . A . . LowGQX END=160275391 GT ./. chr1 160275471 . G . . LowGQX END=160275571 GT ./. chr1 160276142 . A . . LowGQX END=160276321 GT ./. chr1 160276945 . T . . LowGQX END=160277045 GT ./. chr1 160278879 . A . . LowGQX END=160278979 GT ./. chr1 160279966 . T . . LowGQX END=160280066 GT ./. chr1 160281656 . A . . LowGQX END=160281811 GT ./. chr1 160282867 . G . . LowGQX END=160282967 GT ./. chr1 160283778 . A . . LowGQX END=160283918 GT ./. chr1 160293219 . A . . LowGQX END=160293323 GT ./. chr1 160295331 . A . . LowGQX END=160295445 GT ./. chr1 160302236 . A . . LowGQX END=160302350 GT ./. chr1 160303382 . T . . LowGQX END=160303482 GT ./. chr1 160305023 . A . . LowGQX END=160305123 GT ./. chr1 160309686 . A . . LowGQX END=160309786 GT ./. chr1 160309969 . A . . LowGQX END=160310087 GT ./. chr1 160312891 . C . . LowGQX END=160312991 GT ./. chr1 160313136 . C . . LowGQX END=160313323 GT ./. chr1 160313494 . G . . LowGQX END=160313594 GT ./. chr1 160314342 . A . . LowGQX END=160314442 GT ./. chr1 160314461 . C . . LowGQX END=160314668 GT ./. chr1 160318738 . T . . LowGQX END=160318964 GT ./. chr1 160319258 . T . . LowGQX END=160319512 GT ./. chr1 160319844 . G . . LowGQX END=160320092 GT ./. chr1 160320961 . G . . LowGQX END=160321214 GT ./. chr1 160321435 . C . . LowGQX END=160321647 GT ./. chr1 160321793 . G . . LowGQX END=160322048 GT ./. chr1 160322626 . C . . LowGQX END=160322833 GT ./. chr1 160322899 . G . . LowGQX END=160323079 GT ./. chr1 160323857 . T . . LowGQX END=160324132 GT ./. chr1 160325394 . G . . LowGQX END=160325599 GT ./. chr1 160325602 . A . . LowGQX END=160325800 GT ./. chr1 160325999 . T . . LowGQX END=160326189 GT ./. chr1 160326339 . T . . LowGQX END=160326596 GT ./. chr1 160326780 . A . . LowGQX END=160327095 GT ./. chr1 160327888 . A . . LowGQX END=160328113 GT ./. chr1 160340509 . G . . LowGQX END=160340926 GT ./. chr1 160385577 . A . . LowGQX END=160385750 GT ./. chr1 160385801 . A . . LowGQX END=160386024 GT ./. chr1 160388741 . T . . LowGQX END=160389451 GT ./. chr1 160390150 . T . . LowGQX END=160390389 GT ./. chr1 160390791 . A . . LowGQX END=160391029 GT ./. chr1 160393791 . G . . LowGQX END=160394125 GT ./. chr1 160394857 . A . . LowGQX END=160395220 GT ./. chr1 160456471 . G . . LowGQX END=160456571 GT ./. chr1 160456822 . A . . LowGQX END=160456980 GT ./. chr1 160458869 . A . . LowGQX END=160458969 GT ./. chr1 160459949 . T . . LowGQX END=160460049 GT ./. chr1 160460363 . G . . LowGQX END=160460478 GT ./. chr1 160460892 . T . . LowGQX END=160461181 GT ./. chr1 160465849 . A . . LowGQX END=160466186 GT ./. chr1 160492842 . C . . LowGQX END=160493009 GT ./. chr1 160518029 . G . . LowGQX END=160518129 GT ./. chr1 160519689 . A . . LowGQX END=160519789 GT ./. chr1 160520726 . A . . LowGQX END=160520886 GT ./. chr1 160522461 . T . . LowGQX END=160522561 GT ./. chr1 160523084 . T . . LowGQX END=160523290 GT ./. chr1 160523598 . C . . LowGQX END=160523939 GT ./. chr1 160535192 . A . . LowGQX END=160535538 GT ./. chr1 160549155 . A . . LowGQX END=160549255 GT ./. chr1 160580050 . G . . LowGQX END=160580150 GT ./. chr1 160580514 . A . . LowGQX END=160580614 GT ./. chr1 160582275 . C . . LowGQX END=160582375 GT ./. chr1 160585492 . C . . LowGQX END=160585592 GT ./. chr1 160589553 . A . . LowGQX END=160589653 GT ./. chr1 160593881 . C . . LowGQX END=160594034 GT ./. chr1 160604401 . A . . LowGQX END=160604690 GT ./. chr1 160606949 . T . . LowGQX END=160607322 GT ./. chr1 160616648 . A . . LowGQX END=160616748 GT ./. chr1 160648832 . A . . LowGQX END=160648932 GT ./. chr1 160650884 . T . . LowGQX END=160651261 GT ./. chr1 160654551 . A . . LowGQX END=160654982 GT ./. chr1 160681463 . G . . LowGQX END=160681563 GT ./. chr1 160709010 . T . . LowGQX END=160709170 GT ./. chr1 160717982 . A . . LowGQX END=160718307 GT ./. chr1 160719609 . A . . LowGQX END=160719923 GT ./. chr1 160720092 . A . . LowGQX END=160720216 GT ./. chr1 160721133 . A . . LowGQX END=160721241 GT ./. chr1 160721958 . G . . LowGQX END=160722058 GT ./. chr1 160722882 . T . . LowGQX END=160722982 GT ./. chr1 160765976 . T . . LowGQX END=160766104 GT ./. chr1 160769541 . A . . LowGQX END=160769875 GT ./. chr1 160771578 . A . . LowGQX END=160771710 GT ./. chr1 160783424 . A . . LowGQX END=160783704 GT ./. chr1 160784208 . A . . LowGQX END=160784596 GT ./. chr1 160786382 . A . . LowGQX END=160786656 GT ./. chr1 160788006 . A . . LowGQX END=160788112 GT ./. chr1 160789088 . C . . LowGQX END=160789188 GT ./. chr1 160793253 . A . . LowGQX END=160793589 GT ./. chr1 160793956 . G . . LowGQX END=160794056 GT ./. chr1 160797523 . A . . LowGQX END=160797623 GT ./. chr1 160801128 . C . . LowGQX END=160801228 GT ./. chr1 160802288 . T . . LowGQX END=160802388 GT ./. chr1 160802445 . A . . LowGQX END=160802545 GT ./. chr1 160803824 . C . . LowGQX END=160803924 GT ./. chr1 160805965 . T . . LowGQX END=160806065 GT ./. chr1 160808225 . C . . LowGQX END=160808325 GT ./. chr1 160808727 . A . . LowGQX END=160808842 GT ./. chr1 160810998 . A . . LowGQX END=160811291 GT ./. chr1 160811372 . A . . LowGQX END=160811694 GT ./. chr1 160832388 . C . . LowGQX END=160832488 GT ./. chr1 160846452 . T . . LowGQX END=160846609 GT ./. chr1 160849099 . A . . LowGQX END=160849207 GT ./. chr1 160850376 . A . . LowGQX END=160850501 GT ./. chr1 160850942 . A . . LowGQX END=160851105 GT ./. chr1 160851730 . T . . LowGQX END=160851997 GT ./. chr1 160853216 . A . . LowGQX END=160853319 GT ./. chr1 160854589 . G . . LowGQX END=160854689 GT ./. chr1 160914898 . G . . LowGQX END=160915085 GT ./. chr1 160917717 . A . . LowGQX END=160917825 GT ./. chr1 160919834 . A . . LowGQX END=160919959 GT ./. chr1 160920341 . A . . LowGQX END=160920504 GT ./. chr1 160920831 . A . . LowGQX END=160921083 GT ./. chr1 160922408 . A . . LowGQX END=160922526 GT ./. chr1 160924159 . C . . LowGQX END=160924259 GT ./. chr1 160924475 . A . . LowGQX END=160924575 GT ./. chr1 160968629 . A . . LowGQX END=160968729 GT ./. chr1 160968808 . C . . LowGQX END=160968908 GT ./. chr1 160969143 . A . . LowGQX END=160969243 GT ./. chr1 160969428 . A . . LowGQX END=160969540 GT ./. chr1 160969664 . A . . LowGQX END=160969771 GT ./. chr1 160969934 . A . . LowGQX END=160970141 GT ./. chr1 160970419 . A . . LowGQX END=160970570 GT ./. chr1 160970808 . A . . LowGQX END=160970920 GT ./. chr1 160971060 . C . . LowGQX END=160971160 GT ./. chr1 160990728 . G . . LowGQX END=160990882 GT ./. chr1 161007541 . G . . LowGQX END=161007641 GT ./. chr1 161007668 . A . . LowGQX END=161007866 GT ./. chr1 161008340 . C . . LowGQX END=161008485 GT ./. chr1 161008658 . C . . LowGQX END=161008758 GT ./. chr1 161009705 . C . . LowGQX END=161009805 GT ./. chr1 161009990 . A . . LowGQX END=161010123 GT ./. chr1 161010364 . A . . LowGQX END=161010464 GT ./. chr1 161010584 . T . . LowGQX END=161010684 GT ./. chr1 161011108 . A . . LowGQX END=161011208 GT ./. chr1 161011439 . A . . LowGQX END=161011639 GT ./. chr1 161011904 . A . . LowGQX END=161012010 GT ./. chr1 161012343 . A . . LowGQX END=161012463 GT ./. chr1 161012598 . T . . LowGQX END=161012698 GT ./. chr1 161013012 . C . . LowGQX END=161013112 GT ./. chr1 161016731 . C . . LowGQX END=161016831 GT ./. chr1 161016856 . G . . LowGQX END=161016956 GT ./. chr1 161017503 . A . . LowGQX END=161019127 GT ./. chr1 161019212 . A . . LowGQX END=161019482 GT ./. chr1 161021102 . A . . LowGQX END=161021508 GT ./. chr1 161022065 . C . . LowGQX END=161022165 GT ./. chr1 161022228 . A . . LowGQX END=161022336 GT ./. chr1 161022414 . A . . LowGQX END=161022590 GT ./. chr1 161023046 . A . . LowGQX END=161023178 GT ./. chr1 161024154 . A . . LowGQX END=161024266 GT ./. chr1 161024405 . T . . LowGQX END=161024505 GT ./. chr1 161026176 . A . . LowGQX END=161026325 GT ./. chr1 161029402 . A . . LowGQX END=161029509 GT ./. chr1 161029957 . G . . LowGQX END=161030057 GT ./. chr1 161039316 . A . . LowGQX END=161039417 GT ./. chr1 161042400 . C . . LowGQX END=161042727 GT ./. chr1 161042964 . A . . LowGQX END=161043141 GT ./. chr1 161043459 . A . . LowGQX END=161043637 GT ./. chr1 161043956 . C . . LowGQX END=161044215 GT ./. chr1 161044339 . C . . LowGQX END=161044601 GT ./. chr1 161046094 . A . . LowGQX END=161046317 GT ./. chr1 161047192 . A . . LowGQX END=161047585 GT ./. chr1 161049329 . T . . LowGQX END=161049791 GT ./. chr1 161058957 . T . . LowGQX END=161059138 GT ./. chr1 161068324 . C . . LowGQX END=161069118 GT ./. chr1 161069134 . A . . LowGQX END=161069298 GT ./. chr1 161069367 . A . . LowGQX END=161069589 GT ./. chr1 161069849 . A . . LowGQX END=161070017 GT ./. chr1 161070471 . C . . LowGQX END=161070652 GT ./. chr1 161071836 . A . . LowGQX END=161071964 GT ./. chr1 161072072 . C . . LowGQX END=161072172 GT ./. chr1 161087730 . G . . LowGQX END=161087830 GT ./. chr1 161087918 . C . . LowGQX END=161088018 GT ./. chr1 161088265 . G . . LowGQX END=161088365 GT ./. chr1 161088574 . A . . LowGQX END=161088674 GT ./. chr1 161088922 . A . . LowGQX END=161089181 GT ./. chr1 161089297 . A . . LowGQX END=161089405 GT ./. chr1 161089607 . A . . LowGQX END=161089745 GT ./. chr1 161089895 . A . . LowGQX END=161090025 GT ./. chr1 161090287 . A . . LowGQX END=161090558 GT ./. chr1 161091935 . G . . LowGQX END=161092316 GT ./. chr1 161092774 . C . . LowGQX END=161093014 GT ./. chr1 161093627 . A . . LowGQX END=161093739 GT ./. chr1 161093926 . A . . LowGQX END=161094255 GT ./. chr1 161123786 . A . . LowGQX END=161123913 GT ./. chr1 161126724 . C . . LowGQX END=161126824 GT ./. chr1 161127026 . G . . LowGQX END=161127126 GT ./. chr1 161127396 . A . . LowGQX END=161127496 GT ./. chr1 161127907 . A . . LowGQX END=161128007 GT ./. chr1 161128193 . G . . LowGQX END=161128293 GT ./. chr1 161130429 . C . . LowGQX END=161131033 GT ./. chr1 161131808 . A . . LowGQX END=161131908 GT ./. chr1 161132058 . A . . LowGQX END=161132183 GT ./. chr1 161132403 . A . . LowGQX END=161132519 GT ./. chr1 161132677 . G . . LowGQX END=161132867 GT ./. chr1 161133328 . C . . LowGQX END=161133428 GT ./. chr1 161133666 . A . . LowGQX END=161133774 GT ./. chr1 161133948 . C . . LowGQX END=161134048 GT ./. chr1 161134314 . A . . LowGQX END=161134414 GT ./. chr1 161134623 . A . . LowGQX END=161134735 GT ./. chr1 161134817 . A . . LowGQX END=161134936 GT ./. chr1 161135143 . C . . LowGQX END=161135243 GT ./. chr1 161136587 . G . . LowGQX END=161136776 GT ./. chr1 161136839 . C . . LowGQX END=161137076 GT ./. chr1 161137103 . G . . LowGQX END=161137328 GT ./. chr1 161137734 . C . . LowGQX END=161137969 GT ./. chr1 161138162 . T . . LowGQX END=161138418 GT ./. chr1 161138732 . G . . LowGQX END=161139025 GT ./. chr1 161139390 . T . . LowGQX END=161139562 GT ./. chr1 161139645 . G . . LowGQX END=161139866 GT ./. chr1 161140148 . A . . LowGQX END=161140611 GT ./. chr1 161140646 . C . . LowGQX END=161141018 GT ./. chr1 161141604 . A . . LowGQX END=161141882 GT ./. chr1 161142015 . A . . LowGQX END=161142124 GT ./. chr1 161143393 . A . . LowGQX END=161143520 GT ./. chr1 161143644 . T . . LowGQX END=161143842 GT ./. chr1 161144711 . A . . LowGQX END=161145081 GT ./. chr1 161145596 . A . . LowGQX END=161145853 GT ./. chr1 161146638 . G . . LowGQX END=161146873 GT ./. chr1 161160926 . G . . LowGQX END=161161357 GT ./. chr1 161161853 . A . . LowGQX END=161162033 GT ./. chr1 161163001 . A . . LowGQX END=161163181 GT ./. chr1 161163428 . A . . LowGQX END=161163619 GT ./. chr1 161163723 . A . . LowGQX END=161164014 GT ./. chr1 161165253 . A . . LowGQX END=161165428 GT ./. chr1 161165959 . A . . LowGQX END=161166096 GT ./. chr1 161166283 . T . . LowGQX END=161166673 GT ./. chr1 161167783 . A . . LowGQX END=161168420 GT ./. chr1 161172125 . T . . LowGQX END=161172322 GT ./. chr1 161173176 . A . . LowGQX END=161173385 GT ./. chr1 161176146 . G . . LowGQX END=161176439 GT ./. chr1 161178932 . T . . LowGQX END=161179155 GT ./. chr1 161179222 . G . . LowGQX END=161179437 GT ./. chr1 161179596 . G . . LowGQX END=161179773 GT ./. chr1 161179850 . T . . LowGQX END=161180033 GT ./. chr1 161180043 . T . . LowGQX END=161180231 GT ./. chr1 161180330 . C . . LowGQX END=161180553 GT ./. chr1 161182090 . C . . LowGQX END=161182322 GT ./. chr1 161183119 . G . . LowGQX END=161183317 GT ./. chr1 161183388 . G . . LowGQX END=161183574 GT ./. chr1 161183603 . C . . LowGQX END=161183732 GT ./. chr1 161183895 . C . . LowGQX END=161184035 GT ./. chr1 161185087 . C . . LowGQX END=161185187 GT ./. chr1 161187773 . C . . LowGQX END=161187873 GT ./. chr1 161187999 . A . . LowGQX END=161188099 GT ./. chr1 161188454 . G . . LowGQX END=161188554 GT ./. chr1 161188653 . T . . LowGQX END=161188753 GT ./. chr1 161190148 . A . . LowGQX END=161190321 GT ./. chr1 161192144 . A . . LowGQX END=161192364 GT ./. chr1 161192657 . T . . LowGQX END=161192892 GT ./. chr1 161193089 . A . . LowGQX END=161193243 GT ./. chr1 161196278 . A . . LowGQX END=161196397 GT ./. chr1 161196662 . C . . LowGQX END=161196762 GT ./. chr1 161197045 . C . . LowGQX END=161197145 GT ./. chr1 161197424 . A . . LowGQX END=161197530 GT ./. chr1 161197672 . A . . LowGQX END=161197782 GT ./. chr1 161197974 . A . . LowGQX END=161198101 GT ./. chr1 161198207 . G . . LowGQX END=161198307 GT ./. chr1 161198503 . A . . LowGQX END=161198610 GT ./. chr1 161198744 . A . . LowGQX END=161198888 GT ./. chr1 161199467 . G . . LowGQX END=161199567 GT ./. chr1 161199585 . C . . LowGQX END=161199719 GT ./. chr1 161200538 . C . . LowGQX END=161200726 GT ./. chr1 161200821 . G . . LowGQX END=161201038 GT ./. chr1 161201095 . C . . LowGQX END=161201325 GT ./. chr1 161202595 . A . . LowGQX END=161202739 GT ./. chr1 161202957 . A . . LowGQX END=161203131 GT ./. chr1 161205594 . A . . LowGQX END=161205770 GT ./. chr1 161206247 . A . . LowGQX END=161206358 GT ./. chr1 161207791 . T . . LowGQX END=161207891 GT ./. chr1 161228659 . C . . LowGQX END=161228819 GT ./. chr1 161253435 . T . . LowGQX END=161253535 GT ./. chr1 161254128 . G . . LowGQX END=161254272 GT ./. chr1 161275612 . G . . LowGQX END=161275819 GT ./. chr1 161275847 . G . . LowGQX END=161276010 GT ./. chr1 161276068 . A . . LowGQX END=161276306 GT ./. chr1 161276447 . G . . LowGQX END=161276763 GT ./. chr1 161276997 . T . . LowGQX END=161277266 GT ./. chr1 161279572 . G . . LowGQX END=161279762 GT ./. chr1 161284145 . C . . LowGQX END=161284267 GT ./. chr1 161293342 . A . . LowGQX END=161293512 GT ./. chr1 161298135 . T . . LowGQX END=161298339 GT ./. chr1 161309313 . A . . LowGQX END=161309413 GT ./. chr1 161310325 . C . . LowGQX END=161310497 GT ./. chr1 161326416 . T . . LowGQX END=161326682 GT ./. chr1 161332068 . T . . LowGQX END=161332382 GT ./. chr1 161334753 . T . . LowGQX END=161334943 GT ./. chr1 161335303 . G . . LowGQX END=161335495 GT ./. chr1 161335979 . G . . LowGQX END=161336079 GT ./. chr1 161336211 . G . . LowGQX END=161336311 GT ./. chr1 161337596 . A . . LowGQX END=161337696 GT ./. chr1 161475251 . T . . LowGQX END=161475351 GT ./. chr1 161475738 . C . . LowGQX END=161475838 GT ./. chr1 161476123 . G . . LowGQX END=161476429 GT ./. chr1 161479608 . A . . LowGQX END=161479867 GT ./. chr1 161480622 . A . . LowGQX END=161480749 GT ./. chr1 161483654 . C . . LowGQX END=161483754 GT ./. chr1 161487763 . A . . LowGQX END=161487941 GT ./. chr1 161494436 . A . . LowGQX END=161496383 GT ./. chr1 161512800 . G . . LowGQX END=161512992 GT ./. chr1 161514489 . A . . LowGQX END=161514751 GT ./. chr1 161518209 . A . . LowGQX END=161518471 GT ./. chr1 161518762 . G . . LowGQX END=161518862 GT ./. chr1 161519485 . A . . LowGQX END=161519637 GT ./. chr1 161551176 . G . . LowGQX END=161551340 GT ./. chr1 161558112 . G . . LowGQX END=161558272 GT ./. chr1 161559328 . C . . LowGQX END=161559610 GT ./. chr1 161560933 . G . . LowGQX END=161561189 GT ./. chr1 161561857 . A . . LowGQX END=161562033 GT ./. chr1 161565342 . G . . LowGQX END=161565522 GT ./. chr1 161569395 . A . . LowGQX END=161569594 GT ./. chr1 161576070 . A . . LowGQX END=161577185 GT ./. chr1 161594303 . C . . LowGQX END=161594432 GT ./. chr1 161595933 . A . . LowGQX END=161596195 GT ./. chr1 161599555 . T . . LowGQX END=161599835 GT ./. chr1 161600119 . G . . LowGQX END=161600219 GT ./. chr1 161600843 . A . . LowGQX END=161600993 GT ./. chr1 161632979 . T . . LowGQX END=161633162 GT ./. chr1 161633220 . G . . LowGQX END=161633380 GT ./. chr1 161639943 . G . . LowGQX END=161640103 GT ./. chr1 161641180 . A . . LowGQX END=161641442 GT ./. chr1 161642763 . A . . LowGQX END=161643022 GT ./. chr1 161643233 . T . . LowGQX END=161643333 GT ./. chr1 161643687 . C . . LowGQX END=161643953 GT ./. chr1 161644975 . G . . LowGQX END=161645126 GT ./. chr1 161647036 . T . . LowGQX END=161647187 GT ./. chr1 161647204 . C . . LowGQX END=161647355 GT ./. chr1 161676971 . A . . LowGQX END=161677136 GT ./. chr1 161680224 . T . . LowGQX END=161680324 GT ./. chr1 161680464 . T . . LowGQX END=161680705 GT ./. chr1 161680996 . A . . LowGQX END=161681267 GT ./. chr1 161681722 . A . . LowGQX END=161682011 GT ./. chr1 161682873 . A . . LowGQX END=161683173 GT ./. chr1 161692429 . C . . LowGQX END=161692529 GT ./. chr1 161692740 . T . . LowGQX END=161692840 GT ./. chr1 161693155 . A . . LowGQX END=161693414 GT ./. chr1 161695609 . A . . LowGQX END=161695880 GT ./. chr1 161695912 . A . . LowGQX END=161696786 GT ./. chr1 161697035 . A . . LowGQX END=161697455 GT ./. chr1 161719580 . C . . LowGQX END=161719938 GT ./. chr1 161721456 . A . . LowGQX END=161721574 GT ./. chr1 161721654 . A . . LowGQX END=161721777 GT ./. chr1 161722156 . A . . LowGQX END=161722257 GT ./. chr1 161722863 . A . . LowGQX END=161723054 GT ./. chr1 161726574 . A . . LowGQX END=161726740 GT ./. chr1 161736089 . T . . LowGQX END=161736242 GT ./. chr1 161748023 . T . . LowGQX END=161748123 GT ./. chr1 161751696 . C . . LowGQX END=161751850 GT ./. chr1 161753778 . A . . LowGQX END=161753889 GT ./. chr1 161761196 . A . . LowGQX END=161761330 GT ./. chr1 161761912 . A . . LowGQX END=161762120 GT ./. chr1 161771840 . A . . LowGQX END=161772065 GT ./. chr1 161789421 . A . . LowGQX END=161789611 GT ./. chr1 161790856 . T . . LowGQX END=161790956 GT ./. chr1 161816237 . A . . LowGQX END=161816373 GT ./. chr1 161821510 . A . . LowGQX END=161821628 GT ./. chr1 161823012 . A . . LowGQX END=161823172 GT ./. chr1 161829983 . T . . LowGQX END=161830083 GT ./. chr1 161832986 . A . . LowGQX END=161833118 GT ./. chr1 161882079 . A . . LowGQX END=161882179 GT ./. chr1 161928234 . A . . LowGQX END=161928447 GT ./. chr1 161953463 . T . . LowGQX END=161954069 GT ./. chr1 161954592 . A . . LowGQX END=161954773 GT ./. chr1 161967613 . A . . LowGQX END=161968142 GT ./. chr1 161969901 . A . . LowGQX END=161970132 GT ./. chr1 161976085 . A . . LowGQX END=161976266 GT ./. chr1 161987138 . A . . LowGQX END=161987300 GT ./. chr1 161989707 . A . . LowGQX END=161989975 GT ./. chr1 161993045 . A . . LowGQX END=161993223 GT ./. chr1 162039917 . C . . LowGQX END=162040124 GT ./. chr1 162124144 . A . . LowGQX END=162124318 GT ./. chr1 162257083 . G . . LowGQX END=162257278 GT ./. chr1 162270372 . T . . LowGQX END=162270548 GT ./. chr1 162302756 . A . . LowGQX END=162302967 GT ./. chr1 162312275 . G . . LowGQX END=162312434 GT ./. chr1 162313574 . T . . LowGQX END=162313818 GT ./. chr1 162324926 . T . . LowGQX END=162325195 GT ./. chr1 162326699 . T . . LowGQX END=162327001 GT ./. chr1 162330602 . T . . LowGQX END=162330715 GT ./. chr1 162335139 . C . . LowGQX END=162335411 GT ./. chr1 162336791 . C . . LowGQX END=162337309 GT ./. chr1 162343836 . C . . LowGQX END=162344409 GT ./. chr1 162345078 . A . . LowGQX END=162345196 GT ./. chr1 162346476 . A . . LowGQX END=162346583 GT ./. chr1 162348703 . T . . LowGQX END=162348822 GT ./. chr1 162351670 . T . . LowGQX END=162352009 GT ./. chr1 162352971 . G . . LowGQX END=162353474 GT ./. chr1 162367038 . T . . LowGQX END=162367138 GT ./. chr1 162368711 . A . . LowGQX END=162368880 GT ./. chr1 162372511 . C . . LowGQX END=162372611 GT ./. chr1 162381671 . A . . LowGQX END=162381809 GT ./. chr1 162467014 . C . . LowGQX END=162467114 GT ./. chr1 162467789 . C . . LowGQX END=162468061 GT ./. chr1 162469743 . A . . LowGQX END=162470040 GT ./. chr1 162470701 . A . . LowGQX END=162470897 GT ./. chr1 162473542 . A . . LowGQX END=162473642 GT ./. chr1 162482279 . T . . LowGQX END=162482379 GT ./. chr1 162482513 . A . . LowGQX END=162482616 GT ./. chr1 162482829 . G . . LowGQX END=162482929 GT ./. chr1 162487887 . A . . LowGQX END=162487987 GT ./. chr1 162492192 . A . . LowGQX END=162492343 GT ./. chr1 162535857 . T . . LowGQX END=162536141 GT ./. chr1 162546565 . A . . LowGQX END=162546774 GT ./. chr1 162549216 . A . . LowGQX END=162549396 GT ./. chr1 162551075 . A . . LowGQX END=162551252 GT ./. chr1 162557263 . A . . LowGQX END=162557461 GT ./. chr1 162558441 . A . . LowGQX END=162558626 GT ./. chr1 162560111 . A . . LowGQX END=162560304 GT ./. chr1 162562497 . T . . LowGQX END=162562597 GT ./. chr1 162567566 . T . . LowGQX END=162567666 GT ./. chr1 162569058 . T . . LowGQX END=162569158 GT ./. chr1 162688803 . T . . LowGQX END=162688987 GT ./. chr1 162722824 . G . . LowGQX END=162723039 GT ./. chr1 162724363 . G . . LowGQX END=162724697 GT ./. chr1 162724895 . G . . LowGQX END=162725145 GT ./. chr1 162725403 . A . . LowGQX END=162725611 GT ./. chr1 162729535 . G . . LowGQX END=162729821 GT ./. chr1 162730950 . A . . LowGQX END=162731296 GT ./. chr1 162735740 . A . . LowGQX END=162735905 GT ./. chr1 162736968 . T . . LowGQX END=162737201 GT ./. chr1 162740041 . T . . LowGQX END=162740467 GT ./. chr1 162741763 . A . . LowGQX END=162742091 GT ./. chr1 162743208 . A . . LowGQX END=162743438 GT ./. chr1 162745391 . G . . LowGQX END=162745685 GT ./. chr1 162745875 . C . . LowGQX END=162746212 GT ./. chr1 162748319 . T . . LowGQX END=162748571 GT ./. chr1 162749851 . A . . LowGQX END=162750088 GT ./. chr1 162760559 . G . . LowGQX END=162760659 GT ./. chr1 162762447 . A . . LowGQX END=162762669 GT ./. chr1 162765383 . A . . LowGQX END=162765483 GT ./. chr1 162766372 . C . . LowGQX END=162766472 GT ./. chr1 162767590 . A . . LowGQX END=162767709 GT ./. chr1 162768613 . C . . LowGQX END=162768773 GT ./. chr1 162769531 . A . . LowGQX END=162769730 GT ./. chr1 162773219 . A . . LowGQX END=162773328 GT ./. chr1 162774036 . C . . LowGQX END=162774136 GT ./. chr1 162775182 . A . . LowGQX END=162775285 GT ./. chr1 162782086 . A . . LowGQX END=162782213 GT ./. chr1 162822817 . A . . LowGQX END=162822961 GT ./. chr1 162824554 . G . . LowGQX END=162825150 GT ./. chr1 162825421 . C . . LowGQX END=162825549 GT ./. chr1 162829249 . C . . LowGQX END=162829437 GT ./. chr1 163038704 . G . . LowGQX END=163038804 GT ./. chr1 163039041 . G . . LowGQX END=163039321 GT ./. chr1 163042183 . A . . LowGQX END=163042292 GT ./. chr1 163042576 . T . . LowGQX END=163042676 GT ./. chr1 163043244 . A . . LowGQX END=163043415 GT ./. chr1 163044109 . A . . LowGQX END=163044353 GT ./. chr1 163044365 . C . . LowGQX END=163044465 GT ./. chr1 163117130 . T . . LowGQX END=163117296 GT ./. chr1 163122327 . C . . LowGQX END=163122509 GT ./. chr1 163131686 . A . . LowGQX END=163131786 GT ./. chr1 163138046 . A . . LowGQX END=163138161 GT ./. chr1 163142315 . C . . LowGQX END=163142415 GT ./. chr1 163172554 . T . . LowGQX END=163172654 GT ./. chr1 163187300 . T . . LowGQX END=163187400 GT ./. chr1 163295840 . A . . LowGQX END=163295967 GT ./. chr1 163297266 . T . . LowGQX END=163297366 GT ./. chr1 163298007 . A . . LowGQX END=163298107 GT ./. chr1 163298617 . T . . LowGQX END=163298717 GT ./. chr1 163306489 . C . . LowGQX END=163306641 GT ./. chr1 163307797 . A . . LowGQX END=163307897 GT ./. chr1 163309169 . A . . LowGQX END=163309270 GT ./. chr1 163310082 . T . . LowGQX END=163310236 GT ./. chr1 163313521 . A . . LowGQX END=163313701 GT ./. chr1 163315466 . A . . LowGQX END=163315611 GT ./. chr1 163317551 . A . . LowGQX END=163317731 GT ./. chr1 163318683 . C . . LowGQX END=163318873 GT ./. chr1 163325123 . A . . LowGQX END=163325262 GT ./. chr1 164529047 . G . . LowGQX END=164529253 GT ./. chr1 164532462 . T . . LowGQX END=164532562 GT ./. chr1 164559579 . T . . LowGQX END=164559679 GT ./. chr1 164761705 . G . . LowGQX END=164761978 GT ./. chr1 164768934 . A . . LowGQX END=164769129 GT ./. chr1 164776777 . A . . LowGQX END=164776917 GT ./. chr1 164781225 . A . . LowGQX END=164781389 GT ./. chr1 164789307 . A . . LowGQX END=164789424 GT ./. chr1 164790769 . T . . LowGQX END=164790869 GT ./. chr1 164815818 . T . . LowGQX END=164815918 GT ./. chr1 164818558 . T . . LowGQX END=164818658 GT ./. chr1 164853739 . T . . LowGQX END=164853839 GT ./. chr1 165173115 . A . . LowGQX END=165173280 GT ./. chr1 165175088 . A . . LowGQX END=165175274 GT ./. chr1 165177285 . G . . LowGQX END=165177385 GT ./. chr1 165179925 . A . . LowGQX END=165180025 GT ./. chr1 165182876 . A . . LowGQX END=165183053 GT ./. chr1 165218643 . A . . LowGQX END=165218880 GT ./. chr1 165322311 . A . . LowGQX END=165322502 GT ./. chr1 165324709 . C . . LowGQX END=165324809 GT ./. chr1 165370498 . G . . LowGQX END=165370678 GT ./. chr1 165376047 . A . . LowGQX END=165376157 GT ./. chr1 165377460 . T . . LowGQX END=165377560 GT ./. chr1 165378793 . A . . LowGQX END=165378930 GT ./. chr1 165379937 . A . . LowGQX END=165380071 GT ./. chr1 165380184 . A . . LowGQX END=165380349 GT ./. chr1 165386276 . A . . LowGQX END=165386460 GT ./. chr1 165389105 . A . . LowGQX END=165389254 GT ./. chr1 165397954 . A . . LowGQX END=165398206 GT ./. chr1 165406363 . T . . LowGQX END=165406463 GT ./. chr1 165414057 . A . . LowGQX END=165414157 GT ./. chr1 165513532 . C . . LowGQX END=165514158 GT ./. chr1 165532740 . A . . LowGQX END=165533064 GT ./. chr1 165601444 . T . . LowGQX END=165601544 GT ./. chr1 165619031 . A . . LowGQX END=165619253 GT ./. chr1 165620200 . C . . LowGQX END=165620376 GT ./. chr1 165621164 . A . . LowGQX END=165621324 GT ./. chr1 165623462 . A . . LowGQX END=165623640 GT ./. chr1 165624554 . A . . LowGQX END=165624793 GT ./. chr1 165630650 . C . . LowGQX END=165630750 GT ./. chr1 165632285 . T . . LowGQX END=165632385 GT ./. chr1 165634253 . A . . LowGQX END=165634370 GT ./. chr1 165636544 . A . . LowGQX END=165636690 GT ./. chr1 165638122 . T . . LowGQX END=165638253 GT ./. chr1 165638497 . A . . LowGQX END=165638690 GT ./. chr1 165648677 . A . . LowGQX END=165648822 GT ./. chr1 165649712 . T . . LowGQX END=165649923 GT ./. chr1 165651342 . A . . LowGQX END=165651481 GT ./. chr1 165652216 . A . . LowGQX END=165652350 GT ./. chr1 165664487 . A . . LowGQX END=165664637 GT ./. chr1 165667613 . A . . LowGQX END=165667813 GT ./. chr1 165693527 . A . . LowGQX END=165697410 GT ./. chr1 165712353 . T . . LowGQX END=165712600 GT ./. chr1 165721288 . A . . LowGQX END=165721458 GT ./. chr1 165723414 . T . . LowGQX END=165723563 GT ./. chr1 165728711 . T . . LowGQX END=165728873 GT ./. chr1 165737378 . C . . LowGQX END=165737558 GT ./. chr1 165737646 . C . . LowGQX END=165737753 GT ./. chr1 165737868 . G . . LowGQX END=165738160 GT ./. chr1 165797011 . G . . LowGQX END=165797172 GT ./. chr1 165859439 . A . . LowGQX END=165859603 GT ./. chr1 165860461 . A . . LowGQX END=165860562 GT ./. chr1 165865425 . A . . LowGQX END=165865572 GT ./. chr1 165872417 . A . . LowGQX END=165872519 GT ./. chr1 165875133 . G . . LowGQX END=165875233 GT ./. chr1 165876919 . A . . LowGQX END=165877063 GT ./. chr1 166029731 . T . . LowGQX END=166029901 GT ./. chr1 166039476 . T . . LowGQX END=166040003 GT ./. chr1 166123958 . C . . LowGQX END=166124058 GT ./. chr1 166135211 . C . . LowGQX END=166135488 GT ./. chr1 166590054 . A . . LowGQX END=166590244 GT ./. chr1 166591107 . A . . LowGQX END=166591270 GT ./. chr1 166592881 . G . . LowGQX END=166593024 GT ./. chr1 166593871 . A . . LowGQX END=166593971 GT ./. chr1 166810192 . A . . LowGQX END=166810328 GT ./. chr1 166815847 . A . . LowGQX END=166815978 GT ./. chr1 166816729 . A . . LowGQX END=166816832 GT ./. chr1 166818173 . A . . LowGQX END=166819649 GT ./. chr1 166826802 . A . . LowGQX END=166826959 GT ./. chr1 166827323 . A . . LowGQX END=166827521 GT ./. chr1 166829421 . A . . LowGQX END=166829577 GT ./. chr1 166831438 . A . . LowGQX END=166831652 GT ./. chr1 166832985 . T . . LowGQX END=166833205 GT ./. chr1 166838665 . T . . LowGQX END=166838765 GT ./. chr1 166838996 . T . . LowGQX END=166839096 GT ./. chr1 166845384 . G . . LowGQX END=166845484 GT ./. chr1 166888524 . C . . LowGQX END=166888630 GT ./. chr1 166889942 . A . . LowGQX END=166890619 GT ./. chr1 166891828 . A . . LowGQX END=166892049 GT ./. chr1 166896302 . A . . LowGQX END=166896420 GT ./. chr1 166904525 . G . . LowGQX END=166904717 GT ./. chr1 166905826 . A . . LowGQX END=166905977 GT ./. chr1 166908730 . A . . LowGQX END=166908830 GT ./. chr1 166925968 . A . . LowGQX END=166926092 GT ./. chr1 166927004 . A . . LowGQX END=166927341 GT ./. chr1 166944433 . T . . LowGQX END=166944533 GT ./. chr1 166958588 . C . . LowGQX END=166958724 GT ./. chr1 166958971 . A . . LowGQX END=166959071 GT ./. chr1 166960613 . A . . LowGQX END=166960717 GT ./. chr1 166961921 . A . . LowGQX END=166962081 GT ./. chr1 166963236 . G . . LowGQX END=166963336 GT ./. chr1 166973415 . A . . LowGQX END=166973544 GT ./. chr1 166974291 . T . . LowGQX END=166974391 GT ./. chr1 166974491 . A . . LowGQX END=166974637 GT ./. chr1 166985373 . A . . LowGQX END=166985540 GT ./. chr1 166987062 . A . . LowGQX END=166987199 GT ./. chr1 166990250 . T . . LowGQX END=166990410 GT ./. chr1 166990903 . A . . LowGQX END=166991095 GT ./. chr1 167023569 . T . . LowGQX END=167023706 GT ./. chr1 167024211 . A . . LowGQX END=167024351 GT ./. chr1 167024965 . A . . LowGQX END=167025089 GT ./. chr1 167032817 . A . . LowGQX END=167033007 GT ./. chr1 167038157 . A . . LowGQX END=167038378 GT ./. chr1 167042620 . A . . LowGQX END=167042779 GT ./. chr1 167051466 . T . . LowGQX END=167051566 GT ./. chr1 167059454 . G . . LowGQX END=167059554 GT ./. chr1 167064085 . T . . LowGQX END=167064199 GT ./. chr1 167082945 . A . . LowGQX END=167083045 GT ./. chr1 167086563 . A . . LowGQX END=167086799 GT ./. chr1 167088484 . A . . LowGQX END=167088706 GT ./. chr1 167095022 . A . . LowGQX END=167097848 GT ./. chr1 167190115 . T . . LowGQX END=167190215 GT ./. chr1 167298480 . T . . LowGQX END=167298580 GT ./. chr1 167301691 . C . . LowGQX END=167301791 GT ./. chr1 167307360 . C . . LowGQX END=167307520 GT ./. chr1 167334702 . A . . LowGQX END=167334807 GT ./. chr1 167339375 . G . . LowGQX END=167339475 GT ./. chr1 167341102 . T . . LowGQX END=167341276 GT ./. chr1 167343303 . C . . LowGQX END=167343536 GT ./. chr1 167345264 . A . . LowGQX END=167345395 GT ./. chr1 167353092 . A . . LowGQX END=167353192 GT ./. chr1 167356377 . T . . LowGQX END=167356477 GT ./. chr1 167358823 . A . . LowGQX END=167359001 GT ./. chr1 167365521 . A . . LowGQX END=167365667 GT ./. chr1 167367229 . A . . LowGQX END=167367373 GT ./. chr1 167368421 . A . . LowGQX END=167368605 GT ./. chr1 167370686 . A . . LowGQX END=167370796 GT ./. chr1 167381194 . A . . LowGQX END=167381544 GT ./. chr1 167382258 . T . . LowGQX END=167382358 GT ./. chr1 167384735 . A . . LowGQX END=167385050 GT ./. chr1 167385256 . T . . LowGQX END=167385356 GT ./. chr1 167400867 . T . . LowGQX END=167401035 GT ./. chr1 167402210 . C . . LowGQX END=167402349 GT ./. chr1 167403206 . C . . LowGQX END=167403365 GT ./. chr1 167404060 . G . . LowGQX END=167404305 GT ./. chr1 167404309 . C . . LowGQX END=167404724 GT ./. chr1 167407756 . T . . LowGQX END=167407939 GT ./. chr1 167408530 . A . . LowGQX END=167408689 GT ./. chr1 167409850 . C . . LowGQX END=167410056 GT ./. chr1 167487584 . C . . LowGQX END=167487754 GT ./. chr1 167511487 . C . . LowGQX END=167511587 GT ./. chr1 167515336 . A . . LowGQX END=167515525 GT ./. chr1 167517237 . A . . LowGQX END=167517361 GT ./. chr1 167522623 . A . . LowGQX END=167522981 GT ./. chr1 167599614 . G . . LowGQX END=167599714 GT ./. chr1 167653135 . A . . LowGQX END=167653241 GT ./. chr1 167654653 . T . . LowGQX END=167654753 GT ./. chr1 167659272 . G . . LowGQX END=167659372 GT ./. chr1 167663334 . A . . LowGQX END=167663542 GT ./. chr1 167666334 . A . . LowGQX END=167667082 GT ./. chr1 167673858 . C . . LowGQX END=167673958 GT ./. chr1 167691385 . G . . LowGQX END=167691536 GT ./. chr1 167734807 . C . . LowGQX END=167734989 GT ./. chr1 167741510 . A . . LowGQX END=167741728 GT ./. chr1 167742471 . A . . LowGQX END=167742610 GT ./. chr1 167745299 . A . . LowGQX END=167745406 GT ./. chr1 167757055 . A . . LowGQX END=167757161 GT ./. chr1 167778864 . T . . LowGQX END=167779128 GT ./. chr1 167779911 . C . . LowGQX END=167780202 GT ./. chr1 167787259 . G . . LowGQX END=167787557 GT ./. chr1 167787576 . T . . LowGQX END=167787676 GT ./. chr1 167791211 . G . . LowGQX END=167791431 GT ./. chr1 167792195 . G . . LowGQX END=167792413 GT ./. chr1 167793663 . A . . LowGQX END=167794145 GT ./. chr1 167798454 . T . . LowGQX END=167798713 GT ./. chr1 167802174 . T . . LowGQX END=167802452 GT ./. chr1 167803157 . A . . LowGQX END=167803367 GT ./. chr1 167805496 . G . . LowGQX END=167805830 GT ./. chr1 167806248 . G . . LowGQX END=167806348 GT ./. chr1 167806436 . T . . LowGQX END=167806608 GT ./. chr1 167814723 . C . . LowGQX END=167815143 GT ./. chr1 167815172 . G . . LowGQX END=167815553 GT ./. chr1 167817548 . A . . LowGQX END=167817779 GT ./. chr1 167823540 . A . . LowGQX END=167823779 GT ./. chr1 167825352 . G . . LowGQX END=167825729 GT ./. chr1 167828994 . T . . LowGQX END=167829183 GT ./. chr1 167830058 . G . . LowGQX END=167830353 GT ./. chr1 167839444 . T . . LowGQX END=167839700 GT ./. chr1 167844317 . A . . LowGQX END=167844476 GT ./. chr1 167847633 . T . . LowGQX END=167847925 GT ./. chr1 167849302 . A . . LowGQX END=167849481 GT ./. chr1 167849678 . A . . LowGQX END=167849899 GT ./. chr1 167852624 . A . . LowGQX END=167852918 GT ./. chr1 167863040 . T . . LowGQX END=167863231 GT ./. chr1 167865782 . C . . LowGQX END=167865981 GT ./. chr1 167868610 . C . . LowGQX END=167868918 GT ./. chr1 167870849 . T . . LowGQX END=167871102 GT ./. chr1 167871203 . G . . LowGQX END=167871344 GT ./. chr1 167873074 . A . . LowGQX END=167873281 GT ./. chr1 167874180 . A . . LowGQX END=167874430 GT ./. chr1 167887530 . A . . LowGQX END=167887630 GT ./. chr1 167889215 . A . . LowGQX END=167889331 GT ./. chr1 167889778 . A . . LowGQX END=167889878 GT ./. chr1 167893669 . T . . LowGQX END=167893778 GT ./. chr1 167904969 . A . . LowGQX END=167905082 GT ./. chr1 167906089 . C . . LowGQX END=167906249 GT ./. chr1 167921019 . G . . LowGQX END=167921119 GT ./. chr1 167935805 . A . . LowGQX END=167935964 GT ./. chr1 167944066 . A . . LowGQX END=167944256 GT ./. chr1 167956731 . A . . LowGQX END=167956849 GT ./. chr1 167960440 . A . . LowGQX END=167960580 GT ./. chr1 167962462 . A . . LowGQX END=167962681 GT ./. chr1 167971717 . T . . LowGQX END=167971817 GT ./. chr1 167973106 . A . . LowGQX END=167973230 GT ./. chr1 167973769 . A . . LowGQX END=167974034 GT ./. chr1 167985018 . G . . LowGQX END=167985190 GT ./. chr1 167988752 . T . . LowGQX END=167988852 GT ./. chr1 167992206 . A . . LowGQX END=167992306 GT ./. chr1 168007557 . T . . LowGQX END=168007729 GT ./. chr1 168012261 . A . . LowGQX END=168012381 GT ./. chr1 168013817 . T . . LowGQX END=168013917 GT ./. chr1 168014136 . A . . LowGQX END=168014468 GT ./. chr1 168020101 . G . . LowGQX END=168020201 GT ./. chr1 168032857 . A . . LowGQX END=168033037 GT ./. chr1 168034826 . A . . LowGQX END=168034987 GT ./. chr1 168035610 . T . . LowGQX END=168035710 GT ./. chr1 168037543 . A . . LowGQX END=168037704 GT ./. chr1 168044537 . G . . LowGQX END=168044692 GT ./. chr1 168054034 . C . . LowGQX END=168054458 GT ./. chr1 168054767 . C . . LowGQX END=168055037 GT ./. chr1 168056771 . A . . LowGQX END=168056945 GT ./. chr1 168059782 . T . . LowGQX END=168059909 GT ./. chr1 168065744 . A . . LowGQX END=168066473 GT ./. chr1 168073713 . A . . LowGQX END=168074133 GT ./. chr1 168104102 . C . . LowGQX END=168104202 GT ./. chr1 168105494 . C . . LowGQX END=168105635 GT ./. chr1 168106594 . C . . LowGQX END=168106694 GT ./. chr1 168148314 . C . . LowGQX END=168148422 GT ./. chr1 168153138 . A . . LowGQX END=168153322 GT ./. chr1 168153965 . T . . LowGQX END=168154119 GT ./. chr1 168160565 . C . . LowGQX END=168160741 GT ./. chr1 168161407 . G . . LowGQX END=168161507 GT ./. chr1 168165783 . A . . LowGQX END=168165883 GT ./. chr1 168168085 . C . . LowGQX END=168168239 GT ./. chr1 168169139 . A . . LowGQX END=168169287 GT ./. chr1 168195300 . G . . LowGQX END=168195400 GT ./. chr1 168200746 . T . . LowGQX END=168200846 GT ./. chr1 168201065 . A . . LowGQX END=168201165 GT ./. chr1 168204330 . G . . LowGQX END=168204430 GT ./. chr1 168205795 . G . . LowGQX END=168205895 GT ./. chr1 168205930 . C . . LowGQX END=168206030 GT ./. chr1 168208334 . T . . LowGQX END=168208434 GT ./. chr1 168211709 . C . . LowGQX END=168211809 GT ./. chr1 168215923 . T . . LowGQX END=168216284 GT ./. chr1 168250278 . T . . LowGQX END=168250583 GT ./. chr1 168260347 . A . . LowGQX END=168260714 GT ./. chr1 168262331 . C . . LowGQX END=168262568 GT ./. chr1 168266862 . A . . LowGQX END=168267075 GT ./. chr1 168269601 . T . . LowGQX END=168269773 GT ./. chr1 168274195 . G . . LowGQX END=168274486 GT ./. chr1 168277929 . C . . LowGQX END=168278167 GT ./. chr1 168281895 . T . . LowGQX END=168282292 GT ./. chr1 168344701 . G . . LowGQX END=168344861 GT ./. chr1 168510188 . T . . LowGQX END=168510361 GT ./. chr1 168511229 . A . . LowGQX END=168511348 GT ./. chr1 168513123 . A . . LowGQX END=168513223 GT ./. chr1 168545857 . G . . LowGQX END=168545957 GT ./. chr1 168549299 . A . . LowGQX END=168549418 GT ./. chr1 168550288 . A . . LowGQX END=168550461 GT ./. chr1 168665771 . T . . LowGQX END=168665871 GT ./. chr1 168670253 . A . . LowGQX END=168670413 GT ./. chr1 168683457 . A . . LowGQX END=168683587 GT ./. chr1 168698106 . A . . LowGQX END=168698415 GT ./. chr1 169076007 . C . . LowGQX END=169076226 GT ./. chr1 169079855 . T . . LowGQX END=169079955 GT ./. chr1 169080606 . A . . LowGQX END=169080739 GT ./. chr1 169094090 . C . . LowGQX END=169094280 GT ./. chr1 169096460 . A . . LowGQX END=169096660 GT ./. chr1 169099239 . T . . LowGQX END=169099339 GT ./. chr1 169100528 . A . . LowGQX END=169100796 GT ./. chr1 169101317 . A . . LowGQX END=169101477 GT ./. chr1 169101990 . T . . LowGQX END=169102090 GT ./. chr1 169138066 . T . . LowGQX END=169138166 GT ./. chr1 169138265 . T . . LowGQX END=169138365 GT ./. chr1 169138683 . A . . LowGQX END=169138795 GT ./. chr1 169159821 . A . . LowGQX END=169159981 GT ./. chr1 169199954 . A . . LowGQX END=169200060 GT ./. chr1 169204354 . T . . LowGQX END=169204454 GT ./. chr1 169206844 . C . . LowGQX END=169206944 GT ./. chr1 169216242 . G . . LowGQX END=169216342 GT ./. chr1 169256445 . A . . LowGQX END=169256649 GT ./. chr1 169267792 . A . . LowGQX END=169268004 GT ./. chr1 169272299 . A . . LowGQX END=169272459 GT ./. chr1 169279206 . A . . LowGQX END=169279366 GT ./. chr1 169292353 . A . . LowGQX END=169292524 GT ./. chr1 169293629 . A . . LowGQX END=169293741 GT ./. chr1 169336898 . A . . LowGQX END=169336998 GT ./. chr1 169338725 . G . . LowGQX END=169338825 GT ./. chr1 169345776 . A . . LowGQX END=169346275 GT ./. chr1 169347566 . A . . LowGQX END=169347770 GT ./. chr1 169349717 . A . . LowGQX END=169349850 GT ./. chr1 169351298 . A . . LowGQX END=169351522 GT ./. chr1 169356233 . A . . LowGQX END=169356433 GT ./. chr1 169364283 . T . . LowGQX END=169364447 GT ./. chr1 169366473 . A . . LowGQX END=169366630 GT ./. chr1 169388209 . T . . LowGQX END=169388400 GT ./. chr1 169390599 . A . . LowGQX END=169391554 GT ./. chr1 169394047 . A . . LowGQX END=169394168 GT ./. chr1 169435036 . G . . LowGQX END=169435267 GT ./. chr1 169437298 . A . . LowGQX END=169437542 GT ./. chr1 169437831 . A . . LowGQX END=169438126 GT ./. chr1 169439151 . C . . LowGQX END=169439476 GT ./. chr1 169446342 . C . . LowGQX END=169447037 GT ./. chr1 169454750 . C . . LowGQX END=169455056 GT ./. chr1 169483500 . A . . LowGQX END=169483749 GT ./. chr1 169484631 . A . . LowGQX END=169484916 GT ./. chr1 169487599 . T . . LowGQX END=169487853 GT ./. chr1 169489707 . A . . LowGQX END=169489954 GT ./. chr1 169492384 . T . . LowGQX END=169492642 GT ./. chr1 169492988 . C . . LowGQX END=169493194 GT ./. chr1 169494024 . G . . LowGQX END=169494198 GT ./. chr1 169495088 . A . . LowGQX END=169495297 GT ./. chr1 169497102 . C . . LowGQX END=169497384 GT ./. chr1 169498795 . T . . LowGQX END=169499108 GT ./. chr1 169499973 . T . . LowGQX END=169500312 GT ./. chr1 169505693 . G . . LowGQX END=169505970 GT ./. chr1 169509481 . T . . LowGQX END=169512404 GT ./. chr1 169513483 . A . . LowGQX END=169513804 GT ./. chr1 169515629 . T . . LowGQX END=169515872 GT ./. chr1 169518988 . G . . LowGQX END=169519305 GT ./. chr1 169519827 . C . . LowGQX END=169520029 GT ./. chr1 169521744 . T . . LowGQX END=169522024 GT ./. chr1 169524369 . A . . LowGQX END=169524637 GT ./. chr1 169525833 . G . . LowGQX END=169526157 GT ./. chr1 169528340 . A . . LowGQX END=169528586 GT ./. chr1 169529741 . C . . LowGQX END=169530056 GT ./. chr1 169541408 . T . . LowGQX END=169541633 GT ./. chr1 169551618 . T . . LowGQX END=169551812 GT ./. chr1 169555416 . A . . LowGQX END=169555676 GT ./. chr1 169559364 . A . . LowGQX END=169559464 GT ./. chr1 169560572 . C . . LowGQX END=169560730 GT ./. chr1 169562841 . A . . LowGQX END=169562965 GT ./. chr1 169563928 . A . . LowGQX END=169564118 GT ./. chr1 169565161 . A . . LowGQX END=169565375 GT ./. chr1 169566227 . A . . LowGQX END=169566417 GT ./. chr1 169572262 . A . . LowGQX END=169572452 GT ./. chr1 169576170 . A . . LowGQX END=169576375 GT ./. chr1 169578740 . A . . LowGQX END=169578930 GT ./. chr1 169580728 . A . . LowGQX END=169580918 GT ./. chr1 169581453 . A . . LowGQX END=169581643 GT ./. chr1 169582165 . A . . LowGQX END=169582355 GT ./. chr1 169582822 . A . . LowGQX END=169582934 GT ./. chr1 169586264 . A . . LowGQX END=169586655 GT ./. chr1 169588363 . T . . LowGQX END=169588463 GT ./. chr1 169599262 . A . . LowGQX END=169599362 GT ./. chr1 169660884 . G . . LowGQX END=169660984 GT ./. chr1 169665575 . C . . LowGQX END=169665735 GT ./. chr1 169670693 . T . . LowGQX END=169670830 GT ./. chr1 169672395 . C . . LowGQX END=169672582 GT ./. chr1 169673708 . C . . LowGQX END=169673895 GT ./. chr1 169676482 . C . . LowGQX END=169676591 GT ./. chr1 169677557 . C . . LowGQX END=169677945 GT ./. chr1 169679568 . A . . LowGQX END=169679668 GT ./. chr1 169680608 . C . . LowGQX END=169680708 GT ./. chr1 169694864 . T . . LowGQX END=169694964 GT ./. chr1 169695009 . A . . LowGQX END=169695109 GT ./. chr1 169695788 . A . . LowGQX END=169695950 GT ./. chr1 169696488 . A . . LowGQX END=169696669 GT ./. chr1 169696878 . A . . LowGQX END=169697071 GT ./. chr1 169697197 . A . . LowGQX END=169697390 GT ./. chr1 169698325 . A . . LowGQX END=169698518 GT ./. chr1 169698627 . A . . LowGQX END=169698817 GT ./. chr1 169699571 . A . . LowGQX END=169699761 GT ./. chr1 169700974 . A . . LowGQX END=169701086 GT ./. chr1 169701754 . A . . LowGQX END=169702142 GT ./. chr1 169702686 . G . . LowGQX END=169702786 GT ./. chr1 169761716 . A . . LowGQX END=169762839 GT ./. chr1 169764243 . T . . LowGQX END=169764355 GT ./. chr1 169768030 . T . . LowGQX END=169768130 GT ./. chr1 169770019 . T . . LowGQX END=169770119 GT ./. chr1 169771760 . A . . LowGQX END=169771869 GT ./. chr1 169772308 . A . . LowGQX END=169772453 GT ./. chr1 169773214 . A . . LowGQX END=169773390 GT ./. chr1 169775083 . T . . LowGQX END=169775238 GT ./. chr1 169776930 . A . . LowGQX END=169777110 GT ./. chr1 169790811 . T . . LowGQX END=169790911 GT ./. chr1 169792532 . G . . LowGQX END=169792632 GT ./. chr1 169795196 . C . . LowGQX END=169795296 GT ./. chr1 169796190 . A . . LowGQX END=169796343 GT ./. chr1 169796850 . A . . LowGQX END=169796984 GT ./. chr1 169798402 . A . . LowGQX END=169798593 GT ./. chr1 169799392 . T . . LowGQX END=169799492 GT ./. chr1 169799813 . G . . LowGQX END=169799913 GT ./. chr1 169801553 . T . . LowGQX END=169801653 GT ./. chr1 169806066 . A . . LowGQX END=169806256 GT ./. chr1 169811556 . A . . LowGQX END=169811683 GT ./. chr1 169812813 . A . . LowGQX END=169812913 GT ./. chr1 169816829 . A . . LowGQX END=169816947 GT ./. chr1 169818639 . A . . LowGQX END=169818748 GT ./. chr1 169819397 . T . . LowGQX END=169819497 GT ./. chr1 169820956 . A . . LowGQX END=169821195 GT ./. chr1 169821929 . A . . LowGQX END=169822131 GT ./. chr1 169822834 . A . . LowGQX END=169822934 GT ./. chr1 169823409 . A . . LowGQX END=169824108 GT ./. chr1 169824935 . A . . LowGQX END=169825125 GT ./. chr1 169828160 . T . . LowGQX END=169828356 GT ./. chr1 169831752 . A . . LowGQX END=169831941 GT ./. chr1 169833477 . T . . LowGQX END=169833652 GT ./. chr1 169835975 . A . . LowGQX END=169836126 GT ./. chr1 169838067 . A . . LowGQX END=169838183 GT ./. chr1 169839394 . A . . LowGQX END=169839554 GT ./. chr1 169842816 . A . . LowGQX END=169842916 GT ./. chr1 169845117 . A . . LowGQX END=169845235 GT ./. chr1 169847773 . A . . LowGQX END=169847963 GT ./. chr1 169857815 . A . . LowGQX END=169857984 GT ./. chr1 169890815 . T . . LowGQX END=169890925 GT ./. chr1 169923150 . A . . LowGQX END=169923254 GT ./. chr1 169930185 . A . . LowGQX END=169930379 GT ./. chr1 169941592 . C . . LowGQX END=169941747 GT ./. chr1 169947174 . C . . LowGQX END=169947327 GT ./. chr1 169951111 . A . . LowGQX END=169951241 GT ./. chr1 169951841 . A . . LowGQX END=169952031 GT ./. chr1 169952409 . A . . LowGQX END=169952569 GT ./. chr1 169953721 . A . . LowGQX END=169953834 GT ./. chr1 169961294 . A . . LowGQX END=169961399 GT ./. chr1 169985571 . A . . LowGQX END=169985768 GT ./. chr1 169993557 . A . . LowGQX END=169993740 GT ./. chr1 170001025 . A . . LowGQX END=170001128 GT ./. chr1 170003461 . A . . LowGQX END=170003640 GT ./. chr1 170004593 . A . . LowGQX END=170004697 GT ./. chr1 170007429 . A . . LowGQX END=170007629 GT ./. chr1 170008352 . A . . LowGQX END=170008452 GT ./. chr1 170010810 . T . . LowGQX END=170010910 GT ./. chr1 170015851 . A . . LowGQX END=170016010 GT ./. chr1 170024444 . A . . LowGQX END=170024580 GT ./. chr1 170043543 . A . . LowGQX END=170043643 GT ./. chr1 170115248 . C . . LowGQX END=170115438 GT ./. chr1 170129658 . G . . LowGQX END=170129835 GT ./. chr1 170135642 . G . . LowGQX END=170135893 GT ./. chr1 170136626 . G . . LowGQX END=170136899 GT ./. chr1 170501239 . T . . LowGQX END=170501477 GT ./. chr1 170502605 . G . . LowGQX END=170502793 GT ./. chr1 170508300 . A . . LowGQX END=170508760 GT ./. chr1 170511581 . C . . LowGQX END=170511785 GT ./. chr1 170513795 . A . . LowGQX END=170513991 GT ./. chr1 170521105 . A . . LowGQX END=170522984 GT ./. chr1 170633309 . G . . LowGQX END=170633652 GT ./. chr1 170688816 . G . . LowGQX END=170689094 GT ./. chr1 170695310 . T . . LowGQX END=170695595 GT ./. chr1 170699355 . G . . LowGQX END=170699524 GT ./. chr1 170705138 . T . . LowGQX END=170705379 GT ./. chr1 170914601 . G . . LowGQX END=170914761 GT ./. chr1 170916642 . T . . LowGQX END=170916742 GT ./. chr1 170927592 . T . . LowGQX END=170927692 GT ./. chr1 170928601 . A . . LowGQX END=170928741 GT ./. chr1 170931025 . T . . LowGQX END=170931179 GT ./. chr1 170934290 . A . . LowGQX END=170934399 GT ./. chr1 170940887 . A . . LowGQX END=170941027 GT ./. chr1 170952561 . A . . LowGQX END=170952678 GT ./. chr1 170955700 . A . . LowGQX END=170955854 GT ./. chr1 170958994 . A . . LowGQX END=170959147 GT ./. chr1 170961303 . A . . LowGQX END=170961473 GT ./. chr1 170964528 . A . . LowGQX END=170964675 GT ./. chr1 170965646 . A . . LowGQX END=170965788 GT ./. chr1 170967293 . A . . LowGQX END=170967544 GT ./. chr1 170983257 . G . . LowGQX END=170983396 GT ./. chr1 170984104 . C . . LowGQX END=170984204 GT ./. chr1 170985303 . G . . LowGQX END=170985478 GT ./. chr1 170993505 . T . . LowGQX END=170993689 GT ./. chr1 170993789 . G . . LowGQX END=170993907 GT ./. chr1 170994458 . G . . LowGQX END=170994562 GT ./. chr1 171031254 . A . . LowGQX END=171031354 GT ./. chr1 171033239 . G . . LowGQX END=171033482 GT ./. chr1 171061749 . T . . LowGQX END=171061983 GT ./. chr1 171070262 . G . . LowGQX END=171070362 GT ./. chr1 171070799 . C . . LowGQX END=171070959 GT ./. chr1 171072875 . T . . LowGQX END=171073166 GT ./. chr1 171076765 . A . . LowGQX END=171077030 GT ./. chr1 171077169 . T . . LowGQX END=171077414 GT ./. chr1 171079888 . T . . LowGQX END=171080190 GT ./. chr1 171083096 . A . . LowGQX END=171083554 GT ./. chr1 171085294 . G . . LowGQX END=171085472 GT ./. chr1 171086189 . T . . LowGQX END=171086634 GT ./. chr1 171107340 . T . . LowGQX END=171107543 GT ./. chr1 171107728 . G . . LowGQX END=171107828 GT ./. chr1 171112309 . G . . LowGQX END=171112499 GT ./. chr1 171115495 . G . . LowGQX END=171115685 GT ./. chr1 171116703 . C . . LowGQX END=171116908 GT ./. chr1 171118698 . G . . LowGQX END=171118899 GT ./. chr1 171121048 . G . . LowGQX END=171121405 GT ./. chr1 171123267 . C . . LowGQX END=171123367 GT ./. chr1 171130171 . G . . LowGQX END=171130536 GT ./. chr1 171154851 . T . . LowGQX END=171154987 GT ./. chr1 171162472 . A . . LowGQX END=171162672 GT ./. chr1 171165786 . A . . LowGQX END=171165953 GT ./. chr1 171168483 . A . . LowGQX END=171168630 GT ./. chr1 171173002 . A . . LowGQX END=171173206 GT ./. chr1 171174416 . A . . LowGQX END=171174776 GT ./. chr1 171176844 . T . . LowGQX END=171176944 GT ./. chr1 171177931 . A . . LowGQX END=171178095 GT ./. chr1 171227185 . T . . LowGQX END=171227361 GT ./. chr1 171236680 . A . . LowGQX END=171236873 GT ./. chr1 171244483 . A . . LowGQX END=171244556 GT ./. chr1 171244557 . G . . LowGQX END=171244603;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 171244604 . T . . LowGQX END=171244650 GT ./. chr1 171247866 . A . . LowGQX END=171248013 GT ./. chr1 171249923 . A . . LowGQX END=171250127 GT ./. chr1 171251115 . A . . LowGQX END=171251475 GT ./. chr1 171252211 . C . . LowGQX END=171252370 GT ./. chr1 171254339 . A . . LowGQX END=171254686 GT ./. chr1 171288963 . C . . LowGQX END=171289099 GT ./. chr1 171292131 . C . . LowGQX END=171292334 GT ./. chr1 171293275 . A . . LowGQX END=171293442 GT ./. chr1 171300777 . A . . LowGQX END=171300924 GT ./. chr1 171301846 . A . . LowGQX END=171302050 GT ./. chr1 171303548 . A . . LowGQX END=171303905 GT ./. chr1 171306423 . T . . LowGQX END=171306580 GT ./. chr1 171310550 . A . . LowGQX END=171310981 GT ./. chr1 171481227 . A . . LowGQX END=171481340 GT ./. chr1 171481380 . T . . LowGQX END=171481480 GT ./. chr1 171482133 . G . . LowGQX END=171482312 GT ./. chr1 171482532 . A . . LowGQX END=171482632 GT ./. chr1 171483674 . G . . LowGQX END=171483785 GT ./. chr1 171484872 . G . . LowGQX END=171484999 GT ./. chr1 171486729 . G . . LowGQX END=171486954 GT ./. chr1 171491305 . C . . LowGQX END=171491405 GT ./. chr1 171492359 . G . . LowGQX END=171492494 GT ./. chr1 171492568 . T . . LowGQX END=171492668 GT ./. chr1 171493959 . G . . LowGQX END=171494105 GT ./. chr1 171496907 . T . . LowGQX END=171497007 GT ./. chr1 171501481 . G . . LowGQX END=171502101 GT ./. chr1 171504563 . G . . LowGQX END=171504737 GT ./. chr1 171505167 . G . . LowGQX END=171505418 GT ./. chr1 171506401 . G . . LowGQX END=171506613 GT ./. chr1 171509109 . G . . LowGQX END=171511369 GT ./. chr1 171514617 . G . . LowGQX END=171514827 GT ./. chr1 171519224 . G . . LowGQX END=171519380 GT ./. chr1 171526378 . G . . LowGQX END=171527283 GT ./. chr1 171530150 . T . . LowGQX END=171530250 GT ./. chr1 171535371 . G . . LowGQX END=171535561 GT ./. chr1 171535730 . G . . LowGQX END=171535983 GT ./. chr1 171537382 . A . . LowGQX END=171537482 GT ./. chr1 171540458 . G . . LowGQX END=171540561 GT ./. chr1 171544065 . G . . LowGQX END=171544268 GT ./. chr1 171546572 . G . . LowGQX END=171546777 GT ./. chr1 171548492 . G . . LowGQX END=171548606 GT ./. chr1 171548966 . G . . LowGQX END=171549104 GT ./. chr1 171553094 . G . . LowGQX END=171553327 GT ./. chr1 171553557 . G . . LowGQX END=171553681 GT ./. chr1 171556141 . G . . LowGQX END=171556361 GT ./. chr1 171556786 . G . . LowGQX END=171556891 GT ./. chr1 171557457 . A . . LowGQX END=171557686 GT ./. chr1 171558507 . G . . LowGQX END=171558745 GT ./. chr1 171560725 . G . . LowGQX END=171560987 GT ./. chr1 171605014 . A . . LowGQX END=171605901 GT ./. chr1 171607686 . A . . LowGQX END=171607914 GT ./. chr1 171621097 . A . . LowGQX END=171621803 GT ./. chr1 171673611 . C . . LowGQX END=171673711 GT ./. chr1 171675483 . A . . LowGQX END=171675583 GT ./. chr1 171678795 . A . . LowGQX END=171678895 GT ./. chr1 171679802 . C . . LowGQX END=171679957 GT ./. chr1 171688287 . T . . LowGQX END=171688387 GT ./. chr1 171697638 . T . . LowGQX END=171697738 GT ./. chr1 171707472 . T . . LowGQX END=171707572 GT ./. chr1 171750817 . G . . LowGQX END=171750977 GT ./. chr1 171751106 . A . . LowGQX END=171751263 GT ./. chr1 171752878 . A . . LowGQX END=171753642 GT ./. chr1 171755017 . A . . LowGQX END=171755221 GT ./. chr1 171756873 . A . . LowGQX END=171757073 GT ./. chr1 171759590 . A . . LowGQX END=171759759 GT ./. chr1 171761155 . A . . LowGQX END=171761378 GT ./. chr1 171763534 . A . . LowGQX END=171763670 GT ./. chr1 171765620 . A . . LowGQX END=171765899 GT ./. chr1 171810766 . G . . LowGQX END=171810958 GT ./. chr1 171890875 . T . . LowGQX END=171890975 GT ./. chr1 171956795 . G . . LowGQX END=171956946 GT ./. chr1 171958084 . G . . LowGQX END=171958289 GT ./. chr1 172001541 . G . . LowGQX END=172001641 GT ./. chr1 172002244 . G . . LowGQX END=172002406 GT ./. chr1 172007418 . A . . LowGQX END=172007602 GT ./. chr1 172011148 . G . . LowGQX END=172011285 GT ./. chr1 172013509 . C . . LowGQX END=172013609 GT ./. chr1 172017751 . G . . LowGQX END=172017891 GT ./. chr1 172037952 . T . . LowGQX END=172038052 GT ./. chr1 172050957 . C . . LowGQX END=172051057 GT ./. chr1 172061940 . G . . LowGQX END=172062040 GT ./. chr1 172062801 . T . . LowGQX END=172062901 GT ./. chr1 172100314 . G . . LowGQX END=172100429 GT ./. chr1 172100901 . T . . LowGQX END=172101001 GT ./. chr1 172101983 . T . . LowGQX END=172102083 GT ./. chr1 172107938 . A . . LowGQX END=172108097 GT ./. chr1 172113675 . T . . LowGQX END=172113785 GT ./. chr1 172222662 . C . . LowGQX END=172222823 GT ./. chr1 172277867 . G . . LowGQX END=172278019 GT ./. chr1 172292425 . G . . LowGQX END=172292525 GT ./. chr1 172307903 . G . . LowGQX END=172308003 GT ./. chr1 172308141 . A . . LowGQX END=172308241 GT ./. chr1 172348157 . G . . LowGQX END=172348323 GT ./. chr1 172356272 . G . . LowGQX END=172356500 GT ./. chr1 172357712 . G . . LowGQX END=172357950 GT ./. chr1 172376897 . T . . LowGQX END=172376997 GT ./. chr1 172387390 . A . . LowGQX END=172387490 GT ./. chr1 172389934 . C . . LowGQX END=172390087 GT ./. chr1 172397902 . A . . LowGQX END=172398002 GT ./. chr1 172399404 . A . . LowGQX END=172399504 GT ./. chr1 172400176 . T . . LowGQX END=172400276 GT ./. chr1 172410867 . A . . LowGQX END=172411765 GT ./. chr1 172414206 . C . . LowGQX END=172414306 GT ./. chr1 172417577 . T . . LowGQX END=172417677 GT ./. chr1 172422161 . A . . LowGQX END=172422330 GT ./. chr1 172425543 . C . . LowGQX END=172425643 GT ./. chr1 172431246 . A . . LowGQX END=172431402 GT ./. chr1 172434422 . T . . LowGQX END=172434522 GT ./. chr1 172434725 . T . . LowGQX END=172434825 GT ./. chr1 172437587 . A . . LowGQX END=172437737 GT ./. chr1 172501612 . G . . LowGQX END=172501942 GT ./. chr1 172502316 . G . . LowGQX END=172502640 GT ./. chr1 172520650 . A . . LowGQX END=172520769 GT ./. chr1 172522398 . A . . LowGQX END=172522513 GT ./. chr1 172525007 . A . . LowGQX END=172525166 GT ./. chr1 172526418 . A . . LowGQX END=172526560 GT ./. chr1 172526782 . A . . LowGQX END=172526937 GT ./. chr1 172538107 . A . . LowGQX END=172538285 GT ./. chr1 172539185 . A . . LowGQX END=172539314 GT ./. chr1 172539731 . C . . LowGQX END=172539887 GT ./. chr1 172543029 . A . . LowGQX END=172543189 GT ./. chr1 172544656 . A . . LowGQX END=172544816 GT ./. chr1 172546640 . G . . LowGQX END=172546740 GT ./. chr1 172546882 . T . . LowGQX END=172546982 GT ./. chr1 172547434 . A . . LowGQX END=172547534 GT ./. chr1 172548270 . A . . LowGQX END=172548425 GT ./. chr1 172554143 . T . . LowGQX END=172554243 GT ./. chr1 172554994 . A . . LowGQX END=172555094 GT ./. chr1 172557898 . A . . LowGQX END=172559069 GT ./. chr1 172560118 . T . . LowGQX END=172560218 GT ./. chr1 172569202 . A . . LowGQX END=172569362 GT ./. chr1 172571202 . A . . LowGQX END=172571361 GT ./. chr1 172571834 . A . . LowGQX END=172571963 GT ./. chr1 172577805 . T . . LowGQX END=172577965 GT ./. chr1 172578954 . A . . LowGQX END=172579402 GT ./. chr1 172628291 . C . . LowGQX END=172628741 GT ./. chr1 172629184 . C . . LowGQX END=172629332 GT ./. chr1 172633422 . T . . LowGQX END=172633582 GT ./. chr1 172634711 . G . . LowGQX END=172635208 GT ./. chr1 173010506 . T . . LowGQX END=173010854 GT ./. chr1 173013044 . A . . LowGQX END=173013144 GT ./. chr1 173019880 . C . . LowGQX END=173020103 GT ./. chr1 173155653 . C . . LowGQX END=173156007 GT ./. chr1 173157635 . C . . LowGQX END=173157735 GT ./. chr1 173174401 . T . . LowGQX END=173174501 GT ./. chr1 173176161 . A . . LowGQX END=173176318 GT ./. chr1 173446535 . C . . LowGQX END=173446635 GT ./. chr1 173450463 . A . . LowGQX END=173450624 GT ./. chr1 173454498 . A . . LowGQX END=173454649 GT ./. chr1 173455392 . A . . LowGQX END=173455543 GT ./. chr1 173456872 . A . . LowGQX END=173457005 GT ./. chr1 173470185 . C . . LowGQX END=173470285 GT ./. chr1 173472386 . A . . LowGQX END=173472486 GT ./. chr1 173474379 . C . . LowGQX END=173474479 GT ./. chr1 173475982 . T . . LowGQX END=173476183 GT ./. chr1 173478665 . C . . LowGQX END=173478885 GT ./. chr1 173486674 . A . . LowGQX END=173486846 GT ./. chr1 173490388 . T . . LowGQX END=173490541 GT ./. chr1 173493106 . A . . LowGQX END=173493236 GT ./. chr1 173493916 . A . . LowGQX END=173494069 GT ./. chr1 173495720 . G . . LowGQX END=173495878 GT ./. chr1 173499042 . A . . LowGQX END=173499196 GT ./. chr1 173502746 . A . . LowGQX END=173502946 GT ./. chr1 173503551 . T . . LowGQX END=173503891 GT ./. chr1 173504926 . A . . LowGQX END=173505137 GT ./. chr1 173506079 . A . . LowGQX END=173506181 GT ./. chr1 173516826 . A . . LowGQX END=173516926 GT ./. chr1 173517526 . A . . LowGQX END=173517715 GT ./. chr1 173523863 . A . . LowGQX END=173523963 GT ./. chr1 173526477 . A . . LowGQX END=173526667 GT ./. chr1 173542319 . A . . LowGQX END=173542467 GT ./. chr1 173545798 . A . . LowGQX END=173545902 GT ./. chr1 173550984 . A . . LowGQX END=173551150 GT ./. chr1 173552643 . A . . LowGQX END=173552764 GT ./. chr1 173556802 . A . . LowGQX END=173556972 GT ./. chr1 173567041 . A . . LowGQX END=173567221 GT ./. chr1 173569254 . A . . LowGQX END=173569359 GT ./. chr1 173570787 . A . . LowGQX END=173570918 GT ./. chr1 173579270 . T . . LowGQX END=173579370 GT ./. chr1 173593924 . A . . LowGQX END=173594067 GT ./. chr1 173596202 . A . . LowGQX END=173596302 GT ./. chr1 173604660 . G . . LowGQX END=173604985 GT ./. chr1 173605965 . G . . LowGQX END=173606176 GT ./. chr1 173615983 . A . . LowGQX END=173616155 GT ./. chr1 173626422 . G . . LowGQX END=173626582 GT ./. chr1 173627273 . C . . LowGQX END=173627433 GT ./. chr1 173628192 . T . . LowGQX END=173628560 GT ./. chr1 173636798 . T . . LowGQX END=173636898 GT ./. chr1 173638547 . A . . LowGQX END=173638647 GT ./. chr1 173644428 . A . . LowGQX END=173644583 GT ./. chr1 173685142 . G . . LowGQX END=173685242 GT ./. chr1 173702850 . A . . LowGQX END=173703522 GT ./. chr1 173720901 . A . . LowGQX END=173721064 GT ./. chr1 173722350 . A . . LowGQX END=173722450 GT ./. chr1 173725060 . A . . LowGQX END=173725180 GT ./. chr1 173726113 . A . . LowGQX END=173726301 GT ./. chr1 173735283 . A . . LowGQX END=173735431 GT ./. chr1 173743442 . A . . LowGQX END=173743580 GT ./. chr1 173744771 . A . . LowGQX END=173744984 GT ./. chr1 173751260 . A . . LowGQX END=173751371 GT ./. chr1 173754239 . T . . LowGQX END=173754394 GT ./. chr1 173769572 . G . . LowGQX END=173769672 GT ./. chr1 173772099 . A . . LowGQX END=173772646 GT ./. chr1 173775536 . C . . LowGQX END=173775715 GT ./. chr1 173776403 . A . . LowGQX END=173776659 GT ./. chr1 173780268 . A . . LowGQX END=173780440 GT ./. chr1 173794317 . A . . LowGQX END=173794546 GT ./. chr1 173795774 . T . . LowGQX END=173795976 GT ./. chr1 173797420 . A . . LowGQX END=173797589 GT ./. chr1 173799747 . T . . LowGQX END=173799951 GT ./. chr1 173800622 . G . . LowGQX END=173800820 GT ./. chr1 173802463 . C . . LowGQX END=173802689 GT ./. chr1 173803560 . G . . LowGQX END=173803709 GT ./. chr1 173806037 . T . . LowGQX END=173806236 GT ./. chr1 173807277 . T . . LowGQX END=173807449 GT ./. chr1 173808454 . A . . LowGQX END=173808736 GT ./. chr1 173809953 . G . . LowGQX END=173810163 GT ./. chr1 173814316 . A . . LowGQX END=173814481 GT ./. chr1 173819414 . C . . LowGQX END=173819669 GT ./. chr1 173822436 . C . . LowGQX END=173822757 GT ./. chr1 173822882 . A . . LowGQX END=173823095 GT ./. chr1 173825753 . C . . LowGQX END=173825931 GT ./. chr1 173826605 . T . . LowGQX END=173826895 GT ./. chr1 173833273 . A . . LowGQX END=173833373 GT ./. chr1 173833491 . T . . LowGQX END=173833591 GT ./. chr1 173833897 . C . . LowGQX END=173834056 GT ./. chr1 173834479 . T . . LowGQX END=173834579 GT ./. chr1 173834743 . A . . LowGQX END=173834843 GT ./. chr1 173835034 . T . . LowGQX END=173835186 GT ./. chr1 173835424 . A . . LowGQX END=173835524 GT ./. chr1 173835763 . C . . LowGQX END=173835863 GT ./. chr1 173835997 . A . . LowGQX END=173836097 GT ./. chr1 173836798 . T . . LowGQX END=173836898 GT ./. chr1 173839362 . C . . LowGQX END=173840289 GT ./. chr1 173842603 . A . . LowGQX END=173842770 GT ./. chr1 173854773 . G . . LowGQX END=173855263 GT ./. chr1 173872976 . A . . LowGQX END=173873255 GT ./. chr1 173876537 . G . . LowGQX END=173876704 GT ./. chr1 173878639 . G . . LowGQX END=173879132 GT ./. chr1 173879841 . C . . LowGQX END=173880081 GT ./. chr1 173880886 . T . . LowGQX END=173881204 GT ./. chr1 173883640 . C . . LowGQX END=173884109 GT ./. chr1 173886306 . A . . LowGQX END=173886449 GT ./. chr1 173907857 . T . . LowGQX END=173908013 GT ./. chr1 173910401 . A . . LowGQX END=173910521 GT ./. chr1 173912578 . A . . LowGQX END=173912756 GT ./. chr1 173915612 . A . . LowGQX END=173915749 GT ./. chr1 173915880 . A . . LowGQX END=173915980 GT ./. chr1 173916505 . A . . LowGQX END=173916723 GT ./. chr1 173921122 . A . . LowGQX END=173921279 GT ./. chr1 173930213 . A . . LowGQX END=173930385 GT ./. chr1 173930861 . A . . LowGQX END=173931236 GT ./. chr1 173933109 . A . . LowGQX END=173933328 GT ./. chr1 173933975 . A . . LowGQX END=173934261 GT ./. chr1 173939591 . C . . LowGQX END=173939758 GT ./. chr1 173941645 . A . . LowGQX END=173941768 GT ./. chr1 173947624 . A . . LowGQX END=173947761 GT ./. chr1 173949945 . A . . LowGQX END=173950150 GT ./. chr1 173951863 . A . . LowGQX END=173952043 GT ./. chr1 173952554 . A . . LowGQX END=173952798 GT ./. chr1 173953635 . A . . LowGQX END=173953760 GT ./. chr1 173961891 . A . . LowGQX END=173962126 GT ./. chr1 174188254 . T . . LowGQX END=174188436 GT ./. chr1 174190108 . A . . LowGQX END=174190305 GT ./. chr1 174200281 . A . . LowGQX END=174200496 GT ./. chr1 174210619 . A . . LowGQX END=174210798 GT ./. chr1 174219611 . A . . LowGQX END=174219773 GT ./. chr1 174221581 . G . . LowGQX END=174221761 GT ./. chr1 174241480 . G . . LowGQX END=174241636 GT ./. chr1 174244969 . A . . LowGQX END=174245076 GT ./. chr1 174247738 . A . . LowGQX END=174247920 GT ./. chr1 174274082 . T . . LowGQX END=174274268 GT ./. chr1 174340114 . C . . LowGQX END=174340214 GT ./. chr1 174363131 . A . . LowGQX END=174363286 GT ./. chr1 174417248 . C . . LowGQX END=174418338 GT ./. chr1 174513930 . G . . LowGQX END=174514090 GT ./. chr1 174516974 . G . . LowGQX END=174517194 GT ./. chr1 174606511 . A . . LowGQX END=174606629 GT ./. chr1 174652648 . T . . LowGQX END=174652748 GT ./. chr1 174668661 . A . . LowGQX END=174668791 GT ./. chr1 174670208 . T . . LowGQX END=174670332 GT ./. chr1 174671249 . A . . LowGQX END=174671397 GT ./. chr1 174721369 . A . . LowGQX END=174721522 GT ./. chr1 174769470 . C . . LowGQX END=174769639 GT ./. chr1 174780968 . A . . LowGQX END=174781101 GT ./. chr1 174846495 . T . . LowGQX END=174846595 GT ./. chr1 174846631 . A . . LowGQX END=174846746 GT ./. chr1 174926591 . C . . LowGQX END=174926691 GT ./. chr1 174926831 . G . . LowGQX END=174926931 GT ./. chr1 174926986 . G . . LowGQX END=174927086 GT ./. chr1 174927237 . T . . LowGQX END=174927337 GT ./. chr1 174934053 . A . . LowGQX END=174934153 GT ./. chr1 174938413 . G . . LowGQX END=174938525 GT ./. chr1 174945214 . G . . LowGQX END=174945320 GT ./. chr1 174947936 . C . . LowGQX END=174948036 GT ./. chr1 174951957 . T . . LowGQX END=174952057 GT ./. chr1 174957777 . G . . LowGQX END=174957976 GT ./. chr1 174958985 . G . . LowGQX END=174959139 GT ./. chr1 174969215 . G . . LowGQX END=174969375 GT ./. chr1 174973748 . A . . LowGQX END=174974131 GT ./. chr1 174975879 . A . . LowGQX END=174975980 GT ./. chr1 174976232 . A . . LowGQX END=174976336 GT ./. chr1 174977743 . A . . LowGQX END=174977845 GT ./. chr1 174979057 . A . . LowGQX END=174979218 GT ./. chr1 174983803 . A . . LowGQX END=174984043 GT ./. chr1 174987552 . A . . LowGQX END=174987715 GT ./. chr1 174992408 . C . . LowGQX END=174992547 GT ./. chr1 175036981 . A . . LowGQX END=175037081 GT ./. chr1 175046553 . G . . LowGQX END=175046966 GT ./. chr1 175048456 . C . . LowGQX END=175048846 GT ./. chr1 175049297 . A . . LowGQX END=175049565 GT ./. chr1 175052884 . A . . LowGQX END=175053074 GT ./. chr1 175054536 . T . . LowGQX END=175054636 GT ./. chr1 175063124 . A . . LowGQX END=175063392 GT ./. chr1 175066551 . A . . LowGQX END=175066822 GT ./. chr1 175067466 . A . . LowGQX END=175067734 GT ./. chr1 175086003 . A . . LowGQX END=175086353 GT ./. chr1 175087695 . A . . LowGQX END=175087963 GT ./. chr1 175092534 . A . . LowGQX END=175092802 GT ./. chr1 175096089 . A . . LowGQX END=175096224 GT ./. chr1 175097135 . C . . LowGQX END=175097303 GT ./. chr1 175097729 . A . . LowGQX END=175097885 GT ./. chr1 175104979 . A . . LowGQX END=175105080 GT ./. chr1 175105955 . A . . LowGQX END=175106127 GT ./. chr1 175113521 . A . . LowGQX END=175113689 GT ./. chr1 175116065 . A . . LowGQX END=175116210 GT ./. chr1 175129849 . A . . LowGQX END=175130150 GT ./. chr1 175292491 . G . . LowGQX END=175292615 GT ./. chr1 175293490 . A . . LowGQX END=175293658 GT ./. chr1 175299208 . A . . LowGQX END=175299374 GT ./. chr1 175304845 . A . . LowGQX END=175304946 GT ./. chr1 175306662 . A . . LowGQX END=175306818 GT ./. chr1 175323525 . A . . LowGQX END=175323662 GT ./. chr1 175324637 . A . . LowGQX END=175324772 GT ./. chr1 175325453 . A . . LowGQX END=175325601 GT ./. chr1 175328696 . T . . LowGQX END=175328870 GT ./. chr1 175331797 . A . . LowGQX END=175331948 GT ./. chr1 175332842 . A . . LowGQX END=175332966 GT ./. chr1 175334144 . A . . LowGQX END=175334418 GT ./. chr1 175335009 . A . . LowGQX END=175335277 GT ./. chr1 175336339 . C . . LowGQX END=175336492 GT ./. chr1 175348686 . A . . LowGQX END=175348876 GT ./. chr1 175355166 . A . . LowGQX END=175355440 GT ./. chr1 175360422 . A . . LowGQX END=175360577 GT ./. chr1 175362914 . A . . LowGQX END=175363034 GT ./. chr1 175365678 . A . . LowGQX END=175365946 GT ./. chr1 175372274 . A . . LowGQX END=175372755 GT ./. chr1 175375350 . A . . LowGQX END=175375853 GT ./. chr1 175911205 . T . . LowGQX END=175911305 GT ./. chr1 175914197 . A . . LowGQX END=175914348 GT ./. chr1 175916304 . A . . LowGQX END=175916404 GT ./. chr1 175937533 . G . . LowGQX END=175937677 GT ./. chr1 175951467 . C . . LowGQX END=175951567 GT ./. chr1 175956077 . A . . LowGQX END=175956242 GT ./. chr1 175957422 . A . . LowGQX END=175957551 GT ./. chr1 175958496 . A . . LowGQX END=175958618 GT ./. chr1 175996706 . A . . LowGQX END=175996827 GT ./. chr1 176012313 . A . . LowGQX END=176012413 GT ./. chr1 176012844 . A . . LowGQX END=176012957 GT ./. chr1 176015315 . A . . LowGQX END=176015495 GT ./. chr1 176050236 . T . . LowGQX END=176050426 GT ./. chr1 176054910 . A . . LowGQX END=176055029 GT ./. chr1 176069329 . C . . LowGQX END=176069498 GT ./. chr1 176085739 . G . . LowGQX END=176085839 GT ./. chr1 176102960 . T . . LowGQX END=176103060 GT ./. chr1 176104135 . G . . LowGQX END=176104235 GT ./. chr1 176105604 . A . . LowGQX END=176105704 GT ./. chr1 176118070 . A . . LowGQX END=176118227 GT ./. chr1 176129358 . T . . LowGQX END=176129458 GT ./. chr1 176132003 . A . . LowGQX END=176132127 GT ./. chr1 176132940 . T . . LowGQX END=176133040 GT ./. chr1 176137804 . A . . LowGQX END=176137904 GT ./. chr1 176145044 . A . . LowGQX END=176145204 GT ./. chr1 176153749 . A . . LowGQX END=176153849 GT ./. chr1 176175696 . C . . LowGQX END=176176119 GT ./. chr1 176525457 . G . . LowGQX END=176526380 GT ./. chr1 176563658 . A . . LowGQX END=176564734 GT ./. chr1 176640104 . A . . LowGQX END=176640254 GT ./. chr1 176659271 . A . . LowGQX END=176659622 GT ./. chr1 176661260 . A . . LowGQX END=176661457 GT ./. chr1 176664872 . A . . LowGQX END=176664998 GT ./. chr1 176668234 . A . . LowGQX END=176668728 GT ./. chr1 176671741 . A . . LowGQX END=176671874 GT ./. chr1 176675491 . C . . LowGQX END=176675591 GT ./. chr1 176679117 . A . . LowGQX END=176679315 GT ./. chr1 176680969 . A . . LowGQX END=176681120 GT ./. chr1 176708760 . A . . LowGQX END=176708900 GT ./. chr1 176709114 . A . . LowGQX END=176709335 GT ./. chr1 176734800 . A . . LowGQX END=176734976 GT ./. chr1 176738691 . T . . LowGQX END=176738923 GT ./. chr1 176740101 . A . . LowGQX END=176740319 GT ./. chr1 176758913 . T . . LowGQX END=176759116 GT ./. chr1 176760481 . A . . LowGQX END=176760621 GT ./. chr1 176762634 . T . . LowGQX END=176762808 GT ./. chr1 176769183 . G . . LowGQX END=176769283 GT ./. chr1 176809307 . A . . LowGQX END=176809410 GT ./. chr1 176811504 . T . . LowGQX END=176811604 GT ./. chr1 176826717 . C . . LowGQX END=176826817 GT ./. chr1 176833418 . T . . LowGQX END=176833660 GT ./. chr1 176837968 . T . . LowGQX END=176838166 GT ./. chr1 176845671 . A . . LowGQX END=176845776 GT ./. chr1 176851993 . A . . LowGQX END=176852133 GT ./. chr1 176853473 . A . . LowGQX END=176853629 GT ./. chr1 176857205 . A . . LowGQX END=176857343 GT ./. chr1 176863685 . C . . LowGQX END=176863975 GT ./. chr1 176903286 . A . . LowGQX END=176903479 GT ./. chr1 176905295 . C . . LowGQX END=176905509 GT ./. chr1 176913025 . A . . LowGQX END=176913215 GT ./. chr1 176915060 . A . . LowGQX END=176915259 GT ./. chr1 176918319 . A . . LowGQX END=176918490 GT ./. chr1 176926812 . A . . LowGQX END=176926967 GT ./. chr1 176927439 . T . . LowGQX END=176927621 GT ./. chr1 176934287 . A . . LowGQX END=176934387 GT ./. chr1 176983920 . C . . LowGQX END=176984020 GT ./. chr1 176992505 . C . . LowGQX END=176992710 GT ./. chr1 176993717 . A . . LowGQX END=176993871 GT ./. chr1 176998439 . T . . LowGQX END=176998591 GT ./. chr1 176998768 . A . . LowGQX END=176998880 GT ./. chr1 176999940 . A . . LowGQX END=177000091 GT ./. chr1 177001590 . A . . LowGQX END=177001988 GT ./. chr1 177030212 . A . . LowGQX END=177030404 GT ./. chr1 177133528 . A . . LowGQX END=177133815 GT ./. chr1 177199011 . G . . LowGQX END=177199284 GT ./. chr1 177225053 . A . . LowGQX END=177225248 GT ./. chr1 177226167 . A . . LowGQX END=177226523 GT ./. chr1 177242622 . A . . LowGQX END=177242732 GT ./. chr1 177244254 . A . . LowGQX END=177244354 GT ./. chr1 177245332 . A . . LowGQX END=177245573 GT ./. chr1 177247697 . A . . LowGQX END=177247924 GT ./. chr1 177249538 . G . . LowGQX END=177250667 GT ./. chr1 177898954 . T . . LowGQX END=177899065 GT ./. chr1 177899679 . C . . LowGQX END=177899779 GT ./. chr1 177901615 . G . . LowGQX END=177901715 GT ./. chr1 177901832 . C . . LowGQX END=177902001 GT ./. chr1 177902348 . C . . LowGQX END=177902448 GT ./. chr1 177902618 . C . . LowGQX END=177902772 GT ./. chr1 177905417 . T . . LowGQX END=177905517 GT ./. chr1 177906348 . C . . LowGQX END=177906649 GT ./. chr1 177908766 . A . . LowGQX END=177908925 GT ./. chr1 177909744 . C . . LowGQX END=177909850 GT ./. chr1 177911034 . C . . LowGQX END=177911176 GT ./. chr1 177913695 . C . . LowGQX END=177913802 GT ./. chr1 177915454 . T . . LowGQX END=177915667 GT ./. chr1 177916959 . C . . LowGQX END=177917078 GT ./. chr1 177917525 . C . . LowGQX END=177917735 GT ./. chr1 177921040 . T . . LowGQX END=177921140 GT ./. chr1 177923413 . C . . LowGQX END=177923513 GT ./. chr1 177927262 . C . . LowGQX END=177927498 GT ./. chr1 177927974 . C . . LowGQX END=177928254 GT ./. chr1 177929458 . A . . LowGQX END=177929558 GT ./. chr1 177929925 . C . . LowGQX END=177930078 GT ./. chr1 177930724 . C . . LowGQX END=177930924 GT ./. chr1 177933305 . C . . LowGQX END=177933415 GT ./. chr1 177934181 . C . . LowGQX END=177934303 GT ./. chr1 177935027 . C . . LowGQX END=177935141 GT ./. chr1 177936817 . C . . LowGQX END=177937117 GT ./. chr1 178062133 . T . . LowGQX END=178062454 GT ./. chr1 178063627 . C . . LowGQX END=178063832 GT ./. chr1 178252697 . A . . LowGQX END=178252829 GT ./. chr1 178269125 . A . . LowGQX END=178269256 GT ./. chr1 178310688 . C . . LowGQX END=178310788 GT ./. chr1 178359233 . A . . LowGQX END=178359344 GT ./. chr1 178389644 . A . . LowGQX END=178389760 GT ./. chr1 178408555 . A . . LowGQX END=178408713 GT ./. chr1 178410682 . A . . LowGQX END=178410785 GT ./. chr1 178411808 . A . . LowGQX END=178412367 GT ./. chr1 178414651 . A . . LowGQX END=178414800 GT ./. chr1 178420704 . A . . LowGQX END=178420853 GT ./. chr1 178421549 . A . . LowGQX END=178421790 GT ./. chr1 178423580 . A . . LowGQX END=178423786 GT ./. chr1 178425833 . A . . LowGQX END=178426037 GT ./. chr1 178426816 . A . . LowGQX END=178427682 GT ./. chr1 178433411 . A . . LowGQX END=178433550 GT ./. chr1 178435053 . A . . LowGQX END=178435260 GT ./. chr1 178436463 . T . . LowGQX END=178436563 GT ./. chr1 178439793 . G . . LowGQX END=178439893 GT ./. chr1 178442208 . A . . LowGQX END=178442418 GT ./. chr1 178482305 . C . . LowGQX END=178482405 GT ./. chr1 178483160 . A . . LowGQX END=178483321 GT ./. chr1 178483820 . T . . LowGQX END=178483920 GT ./. chr1 178484973 . T . . LowGQX END=178485073 GT ./. chr1 178485720 . T . . LowGQX END=178485820 GT ./. chr1 178489490 . T . . LowGQX END=178489590 GT ./. chr1 178489627 . T . . LowGQX END=178489727 GT ./. chr1 178489806 . A . . LowGQX END=178490073 GT ./. chr1 178490329 . T . . LowGQX END=178490429 GT ./. chr1 178490674 . G . . LowGQX END=178490774 GT ./. chr1 178490783 . A . . LowGQX END=178490883 GT ./. chr1 178491458 . A . . LowGQX END=178491578 GT ./. chr1 178492346 . G . . LowGQX END=178492506 GT ./. chr1 178494505 . G . . LowGQX END=178494605 GT ./. chr1 178499234 . G . . LowGQX END=178499334 GT ./. chr1 178500630 . C . . LowGQX END=178500730 GT ./. chr1 178514055 . G . . LowGQX END=178514164 GT ./. chr1 178514347 . G . . LowGQX END=178514561 GT ./. chr1 178514613 . C . . LowGQX END=178515022 GT ./. chr1 178745879 . T . . LowGQX END=178745979 GT ./. chr1 178753551 . A . . LowGQX END=178753660 GT ./. chr1 178754668 . T . . LowGQX END=178754768 GT ./. chr1 178777108 . T . . LowGQX END=178777272 GT ./. chr1 178780385 . A . . LowGQX END=178780598 GT ./. chr1 178790744 . C . . LowGQX END=178790844 GT ./. chr1 178802557 . A . . LowGQX END=178802727 GT ./. chr1 178820262 . C . . LowGQX END=178820454 GT ./. chr1 178821816 . A . . LowGQX END=178822091 GT ./. chr1 178822727 . A . . LowGQX END=178822925 GT ./. chr1 178834087 . A . . LowGQX END=178834914 GT ./. chr1 178846631 . A . . LowGQX END=178846811 GT ./. chr1 178847975 . A . . LowGQX END=178848135 GT ./. chr1 178852585 . T . . LowGQX END=178852685 GT ./. chr1 178854209 . A . . LowGQX END=178854390 GT ./. chr1 178855102 . A . . LowGQX END=178855302 GT ./. chr1 178858695 . A . . LowGQX END=178858855 GT ./. chr1 178861354 . G . . LowGQX END=178861454 GT ./. chr1 178863002 . G . . LowGQX END=178863162 GT ./. chr1 178866796 . C . . LowGQX END=178866896 GT ./. chr1 178871239 . A . . LowGQX END=178871349 GT ./. chr1 178875839 . T . . LowGQX END=178876058 GT ./. chr1 178885430 . T . . LowGQX END=178885530 GT ./. chr1 179012981 . A . . LowGQX END=179013362 GT ./. chr1 179019408 . T . . LowGQX END=179019508 GT ./. chr1 179023662 . A . . LowGQX END=179023776 GT ./. chr1 179033060 . A . . LowGQX END=179033236 GT ./. chr1 179033438 . A . . LowGQX END=179033634 GT ./. chr1 179035915 . A . . LowGQX END=179036015 GT ./. chr1 179041046 . A . . LowGQX END=179041282 GT ./. chr1 179051251 . C . . LowGQX END=179051531 GT ./. chr1 179051820 . C . . LowGQX END=179051920 GT ./. chr1 179052073 . A . . LowGQX END=179052191 GT ./. chr1 179054714 . A . . LowGQX END=179055031 GT ./. chr1 179057044 . A . . LowGQX END=179057227 GT ./. chr1 179063226 . A . . LowGQX END=179063355 GT ./. chr1 179064101 . A . . LowGQX END=179064356 GT ./. chr1 179066947 . T . . LowGQX END=179067047 GT ./. chr1 179076851 . G . . LowGQX END=179078579 GT ./. chr1 179079355 . A . . LowGQX END=179079593 GT ./. chr1 179079910 . C . . LowGQX END=179080010 GT ./. chr1 179081439 . C . . LowGQX END=179081539 GT ./. chr1 179084011 . A . . LowGQX END=179084168 GT ./. chr1 179086399 . C . . LowGQX END=179086654 GT ./. chr1 179087720 . A . . LowGQX END=179087902 GT ./. chr1 179089318 . T . . LowGQX END=179089418 GT ./. chr1 179090728 . A . . LowGQX END=179091005 GT ./. chr1 179095510 . A . . LowGQX END=179095810 GT ./. chr1 179100444 . A . . LowGQX END=179100619 GT ./. chr1 179102429 . C . . LowGQX END=179102529 GT ./. chr1 179112066 . A . . LowGQX END=179112182 GT ./. chr1 179198353 . T . . LowGQX END=179198535 GT ./. chr1 179271818 . C . . LowGQX END=179271940 GT ./. chr1 179292552 . A . . LowGQX END=179292652 GT ./. chr1 179304639 . A . . LowGQX END=179304795 GT ./. chr1 179306952 . T . . LowGQX END=179307052 GT ./. chr1 179308571 . A . . LowGQX END=179308683 GT ./. chr1 179310161 . A . . LowGQX END=179310448 GT ./. chr1 179311239 . G . . LowGQX END=179311339 GT ./. chr1 179311988 . C . . LowGQX END=179312088 GT ./. chr1 179312698 . C . . LowGQX END=179312798 GT ./. chr1 179314080 . A . . LowGQX END=179314214 GT ./. chr1 179316733 . A . . LowGQX END=179316835 GT ./. chr1 179317977 . A . . LowGQX END=179318080 GT ./. chr1 179319429 . A . . LowGQX END=179319569 GT ./. chr1 179320450 . A . . LowGQX END=179320600 GT ./. chr1 179322648 . C . . LowGQX END=179322799 GT ./. chr1 179335643 . T . . LowGQX END=179335744 GT ./. chr1 179337933 . A . . LowGQX END=179338110 GT ./. chr1 179339108 . A . . LowGQX END=179339216 GT ./. chr1 179347770 . A . . LowGQX END=179347895 GT ./. chr1 179348470 . C . . LowGQX END=179348625 GT ./. chr1 179351814 . T . . LowGQX END=179351914 GT ./. chr1 179352575 . A . . LowGQX END=179352682 GT ./. chr1 179354371 . A . . LowGQX END=179354551 GT ./. chr1 179363036 . A . . LowGQX END=179363181 GT ./. chr1 179364231 . A . . LowGQX END=179364340 GT ./. chr1 179380279 . A . . LowGQX END=179380449 GT ./. chr1 179398651 . A . . LowGQX END=179398757 GT ./. chr1 179399585 . A . . LowGQX END=179399744 GT ./. chr1 179401330 . T . . LowGQX END=179401490 GT ./. chr1 179414103 . A . . LowGQX END=179414342 GT ./. chr1 179418205 . G . . LowGQX END=179418349 GT ./. chr1 179437576 . A . . LowGQX END=179437779 GT ./. chr1 179452260 . C . . LowGQX END=179452360 GT ./. chr1 179460671 . A . . LowGQX END=179460875 GT ./. chr1 179461988 . A . . LowGQX END=179462089 GT ./. chr1 179478429 . A . . LowGQX END=179478541 GT ./. chr1 179494467 . A . . LowGQX END=179494585 GT ./. chr1 179497460 . A . . LowGQX END=179497569 GT ./. chr1 179502922 . T . . LowGQX END=179503022 GT ./. chr1 179503863 . A . . LowGQX END=179504100 GT ./. chr1 179504129 . G . . LowGQX END=179504229 GT ./. chr1 179520257 . G . . LowGQX END=179520638 GT ./. chr1 179521687 . A . . LowGQX END=179521868 GT ./. chr1 179523560 . C . . LowGQX END=179523718 GT ./. chr1 179526111 . G . . LowGQX END=179526417 GT ./. chr1 179528763 . G . . LowGQX END=179528948 GT ./. chr1 179530373 . A . . LowGQX END=179530548 GT ./. chr1 179533774 . G . . LowGQX END=179533980 GT ./. chr1 179544675 . C . . LowGQX END=179545051 GT ./. chr1 179561749 . C . . LowGQX END=179561985 GT ./. chr1 179562593 . A . . LowGQX END=179563005 GT ./. chr1 179564761 . A . . LowGQX END=179564956 GT ./. chr1 179587726 . T . . LowGQX END=179587826 GT ./. chr1 179590098 . T . . LowGQX END=179590249 GT ./. chr1 179599900 . A . . LowGQX END=179600058 GT ./. chr1 179603590 . A . . LowGQX END=179603767 GT ./. chr1 179604800 . A . . LowGQX END=179605025 GT ./. chr1 179608972 . A . . LowGQX END=179609189 GT ./. chr1 179609498 . T . . LowGQX END=179609598 GT ./. chr1 179620000 . A . . LowGQX END=179620205 GT ./. chr1 179621142 . T . . LowGQX END=179621335 GT ./. chr1 179623335 . G . . LowGQX END=179623498 GT ./. chr1 179631237 . A . . LowGQX END=179631437 GT ./. chr1 179632481 . A . . LowGQX END=179632629 GT ./. chr1 179638327 . A . . LowGQX END=179638542 GT ./. chr1 179659829 . A . . LowGQX END=179660081 GT ./. chr1 179782230 . C . . LowGQX END=179782330 GT ./. chr1 179782912 . A . . LowGQX END=179783327 GT ./. chr1 179815204 . C . . LowGQX END=179815966 GT ./. chr1 179816618 . G . . LowGQX END=179816774 GT ./. chr1 179819978 . A . . LowGQX END=179820501 GT ./. chr1 179821734 . C . . LowGQX END=179821834 GT ./. chr1 179833915 . G . . LowGQX END=179834312 GT ./. chr1 179851636 . C . . LowGQX END=179852202 GT ./. chr1 179852743 . C . . LowGQX END=179852843 GT ./. chr1 179853816 . C . . LowGQX END=179853916 GT ./. chr1 179858426 . T . . LowGQX END=179858526 GT ./. chr1 179869232 . A . . LowGQX END=179869332 GT ./. chr1 179870415 . T . . LowGQX END=179870526 GT ./. chr1 179873080 . G . . LowGQX END=179873180 GT ./. chr1 179876930 . A . . LowGQX END=179877030 GT ./. chr1 179877725 . A . . LowGQX END=179877825 GT ./. chr1 179882693 . T . . LowGQX END=179882793 GT ./. chr1 179883112 . T . . LowGQX END=179883212 GT ./. chr1 179886585 . A . . LowGQX END=179887377 GT ./. chr1 179924149 . C . . LowGQX END=179924309 GT ./. chr1 179955303 . G . . LowGQX END=179955403 GT ./. chr1 179956294 . G . . LowGQX END=179956448 GT ./. chr1 179959641 . G . . LowGQX END=179959757 GT ./. chr1 179961166 . A . . LowGQX END=179961357 GT ./. chr1 179965687 . G . . LowGQX END=179966311 GT ./. chr1 179972308 . G . . LowGQX END=179972423 GT ./. chr1 179975588 . G . . LowGQX END=179975703 GT ./. chr1 179981063 . G . . LowGQX END=179981243 GT ./. chr1 179982981 . G . . LowGQX END=179983641 GT ./. chr1 179984983 . G . . LowGQX END=179985106 GT ./. chr1 179989083 . G . . LowGQX END=179990145 GT ./. chr1 179991832 . G . . LowGQX END=179991984 GT ./. chr1 179993553 . G . . LowGQX END=179993718 GT ./. chr1 180000434 . T . . LowGQX END=180000630 GT ./. chr1 180002996 . G . . LowGQX END=180003218 GT ./. chr1 180006060 . G . . LowGQX END=180006240 GT ./. chr1 180010222 . T . . LowGQX END=180010384 GT ./. chr1 180010796 . G . . LowGQX END=180010938 GT ./. chr1 180012190 . G . . LowGQX END=180012328 GT ./. chr1 180013185 . G . . LowGQX END=180013309 GT ./. chr1 180017670 . G . . LowGQX END=180017860 GT ./. chr1 180021296 . A . . LowGQX END=180021456 GT ./. chr1 180022104 . G . . LowGQX END=180022302 GT ./. chr1 180022884 . G . . LowGQX END=180023070 GT ./. chr1 180023544 . T . . LowGQX END=180023644 GT ./. chr1 180031354 . G . . LowGQX END=180031502 GT ./. chr1 180034249 . G . . LowGQX END=180034408 GT ./. chr1 180042949 . T . . LowGQX END=180043049 GT ./. chr1 180044156 . G . . LowGQX END=180044357 GT ./. chr1 180047597 . G . . LowGQX END=180047810 GT ./. chr1 180049651 . G . . LowGQX END=180049831 GT ./. chr1 180053152 . G . . LowGQX END=180053338 GT ./. chr1 180056672 . A . . LowGQX END=180056853 GT ./. chr1 180059840 . A . . LowGQX END=180059940 GT ./. chr1 180061748 . G . . LowGQX END=180063752 GT ./. chr1 180064657 . G . . LowGQX END=180065066 GT ./. chr1 180065172 . G . . LowGQX END=180065320 GT ./. chr1 180067997 . G . . LowGQX END=180068121 GT ./. chr1 180080131 . G . . LowGQX END=180080297 GT ./. chr1 180124041 . G . . LowGQX END=180124311 GT ./. chr1 180135624 . A . . LowGQX END=180135729 GT ./. chr1 180144429 . G . . LowGQX END=180144529 GT ./. chr1 180145064 . A . . LowGQX END=180145171 GT ./. chr1 180147925 . G . . LowGQX END=180148025 GT ./. chr1 180151307 . A . . LowGQX END=180151457 GT ./. chr1 180153049 . A . . LowGQX END=180153188 GT ./. chr1 180155135 . C . . LowGQX END=180155320 GT ./. chr1 180158685 . A . . LowGQX END=180158812 GT ./. chr1 180159566 . A . . LowGQX END=180159718 GT ./. chr1 180163324 . C . . LowGQX END=180163530 GT ./. chr1 180165395 . A . . LowGQX END=180166175 GT ./. chr1 180166423 . G . . LowGQX END=180166523 GT ./. chr1 180167226 . A . . LowGQX END=180167598 GT ./. chr1 180199613 . C . . LowGQX END=180199792 GT ./. chr1 180217369 . A . . LowGQX END=180217648 GT ./. chr1 180235476 . C . . LowGQX END=180235781 GT ./. chr1 180240464 . G . . LowGQX END=180240721 GT ./. chr1 180240919 . T . . LowGQX END=180241193 GT ./. chr1 180243269 . A . . LowGQX END=180243766 GT ./. chr1 180257447 . T . . LowGQX END=180257704 GT ./. chr1 180283776 . A . . LowGQX END=180283912 GT ./. chr1 180366600 . G . . LowGQX END=180366792 GT ./. chr1 180382450 . G . . LowGQX END=180382658 GT ./. chr1 180399264 . A . . LowGQX END=180399449 GT ./. chr1 180461353 . A . . LowGQX END=180461552 GT ./. chr1 180464545 . A . . LowGQX END=180464712 GT ./. chr1 180471129 . A . . LowGQX END=180471453 GT ./. chr1 180601323 . G . . LowGQX END=180601423 GT ./. chr1 180651472 . A . . LowGQX END=180651572 GT ./. chr1 180756887 . A . . LowGQX END=180756993 GT ./. chr1 180772522 . A . . LowGQX END=180772750 GT ./. chr1 180775196 . A . . LowGQX END=180775350 GT ./. chr1 180775602 . C . . LowGQX END=180775702 GT ./. chr1 180780481 . A . . LowGQX END=180780634 GT ./. chr1 180793887 . A . . LowGQX END=180794082 GT ./. chr1 180794299 . A . . LowGQX END=180794483 GT ./. chr1 180804008 . A . . LowGQX END=180804184 GT ./. chr1 180805656 . A . . LowGQX END=180805864 GT ./. chr1 180832842 . A . . LowGQX END=180833013 GT ./. chr1 180842937 . A . . LowGQX END=180843081 GT ./. chr1 180849210 . A . . LowGQX END=180849436 GT ./. chr1 180853123 . T . . LowGQX END=180853223 GT ./. chr1 180882295 . G . . LowGQX END=180882455 GT ./. chr1 180885288 . A . . LowGQX END=180886239 GT ./. chr1 180886969 . T . . LowGQX END=180887069 GT ./. chr1 180897564 . A . . LowGQX END=180897712 GT ./. chr1 180904249 . A . . LowGQX END=180905809 GT ./. chr1 180907689 . A . . LowGQX END=180907850 GT ./. chr1 180910179 . A . . LowGQX END=180910424 GT ./. chr1 180913523 . A . . LowGQX END=180913655 GT ./. chr1 180914427 . G . . LowGQX END=180914727 GT ./. chr1 180919465 . T . . LowGQX END=180919670 GT ./. chr1 180941650 . T . . LowGQX END=180941750 GT ./. chr1 180945695 . A . . LowGQX END=180945795 GT ./. chr1 180949690 . T . . LowGQX END=180949869 GT ./. chr1 180953811 . A . . LowGQX END=180953911 GT ./. chr1 180957373 . A . . LowGQX END=180957484 GT ./. chr1 180959118 . A . . LowGQX END=180959248 GT ./. chr1 180962481 . A . . LowGQX END=180962581 GT ./. chr1 180971740 . A . . LowGQX END=180971840 GT ./. chr1 180974428 . A . . LowGQX END=180974602 GT ./. chr1 180991743 . T . . LowGQX END=180991843 GT ./. chr1 181003128 . C . . LowGQX END=181003228 GT ./. chr1 181018186 . A . . LowGQX END=181018451 GT ./. chr1 181019145 . A . . LowGQX END=181019482 GT ./. chr1 181021369 . A . . LowGQX END=181021649 GT ./. chr1 181022707 . A . . LowGQX END=181022816 GT ./. chr1 181024332 . A . . LowGQX END=181024432 GT ./. chr1 181058027 . C . . LowGQX END=181059027 GT ./. chr1 181452880 . G . . LowGQX END=181453147 GT ./. chr1 181479612 . C . . LowGQX END=181479719 GT ./. chr1 181480506 . G . . LowGQX END=181480647 GT ./. chr1 181546901 . G . . LowGQX END=181547006 GT ./. chr1 181548207 . G . . LowGQX END=181548361 GT ./. chr1 181549730 . G . . LowGQX END=181549913 GT ./. chr1 181620473 . G . . LowGQX END=181620582 GT ./. chr1 181680089 . G . . LowGQX END=181680206 GT ./. chr1 181684451 . C . . LowGQX END=181684551 GT ./. chr1 181685171 . T . . LowGQX END=181685271 GT ./. chr1 181686228 . G . . LowGQX END=181686439 GT ./. chr1 181687190 . G . . LowGQX END=181687304 GT ./. chr1 181688886 . G . . LowGQX END=181689000 GT ./. chr1 181689341 . G . . LowGQX END=181689474 GT ./. chr1 181689905 . A . . LowGQX END=181690005 GT ./. chr1 181690893 . G . . LowGQX END=181691012 GT ./. chr1 181693590 . T . . LowGQX END=181693690 GT ./. chr1 181695200 . G . . LowGQX END=181695300 GT ./. chr1 181700289 . C . . LowGQX END=181700389 GT ./. chr1 181701519 . G . . LowGQX END=181702171 GT ./. chr1 181702572 . G . . LowGQX END=181702887 GT ./. chr1 181705410 . G . . LowGQX END=181705571 GT ./. chr1 181706660 . G . . LowGQX END=181706791 GT ./. chr1 181707483 . C . . LowGQX END=181707583 GT ./. chr1 181708232 . G . . LowGQX END=181708390 GT ./. chr1 181714440 . G . . LowGQX END=181714540 GT ./. chr1 181719568 . T . . LowGQX END=181719668 GT ./. chr1 181721074 . C . . LowGQX END=181721174 GT ./. chr1 181721277 . A . . LowGQX END=181721377 GT ./. chr1 181724372 . G . . LowGQX END=181724534 GT ./. chr1 181725091 . G . . LowGQX END=181725230 GT ./. chr1 181726060 . G . . LowGQX END=181726263 GT ./. chr1 181727082 . G . . LowGQX END=181727248 GT ./. chr1 181727893 . G . . LowGQX END=181728005 GT ./. chr1 181731648 . T . . LowGQX END=181731859 GT ./. chr1 181732541 . G . . LowGQX END=181732668 GT ./. chr1 181735665 . C . . LowGQX END=181735765 GT ./. chr1 181740425 . C . . LowGQX END=181740525 GT ./. chr1 181741201 . G . . LowGQX END=181741368 GT ./. chr1 181745236 . G . . LowGQX END=181745492 GT ./. chr1 181748577 . A . . LowGQX END=181748677 GT ./. chr1 181750561 . A . . LowGQX END=181750661 GT ./. chr1 181752814 . G . . LowGQX END=181752921 GT ./. chr1 181753796 . G . . LowGQX END=181753905 GT ./. chr1 181754453 . G . . LowGQX END=181754555 GT ./. chr1 181754798 . A . . LowGQX END=181754956 GT ./. chr1 181759580 . G . . LowGQX END=181759693 GT ./. chr1 181762800 . G . . LowGQX END=181762930 GT ./. chr1 181763999 . G . . LowGQX END=181764181 GT ./. chr1 181765803 . G . . LowGQX END=181765995 GT ./. chr1 181767427 . G . . LowGQX END=181767971 GT ./. chr1 182025437 . C . . LowGQX END=182027148 GT ./. chr1 182353489 . G . . LowGQX END=182353910 GT ./. chr1 182354441 . C . . LowGQX END=182354743 GT ./. chr1 182354844 . C . . LowGQX END=182355074 GT ./. chr1 182355340 . T . . LowGQX END=182355589 GT ./. chr1 182356215 . C . . LowGQX END=182356479 GT ./. chr1 182357656 . C . . LowGQX END=182357924 GT ./. chr1 182368797 . T . . LowGQX END=182369623 GT ./. chr1 182419257 . A . . LowGQX END=182419357 GT ./. chr1 182423084 . T . . LowGQX END=182423184 GT ./. chr1 182427441 . C . . LowGQX END=182427541 GT ./. chr1 182429138 . G . . LowGQX END=182429269 GT ./. chr1 182429759 . A . . LowGQX END=182429892 GT ./. chr1 182440416 . G . . LowGQX END=182440522 GT ./. chr1 182441530 . G . . LowGQX END=182441693 GT ./. chr1 182442709 . G . . LowGQX END=182443678 GT ./. chr1 182457412 . G . . LowGQX END=182457512 GT ./. chr1 182458114 . G . . LowGQX END=182458338 GT ./. chr1 182462106 . A . . LowGQX END=182462265 GT ./. chr1 182491138 . G . . LowGQX END=182491298 GT ./. chr1 182496713 . G . . LowGQX END=182496908 GT ./. chr1 182499378 . G . . LowGQX END=182499497 GT ./. chr1 182499924 . G . . LowGQX END=182500094 GT ./. chr1 182501796 . G . . LowGQX END=182501927 GT ./. chr1 182509381 . G . . LowGQX END=182509557 GT ./. chr1 182517401 . C . . LowGQX END=182517591 GT ./. chr1 182517834 . G . . LowGQX END=182517960 GT ./. chr1 182520234 . G . . LowGQX END=182520345 GT ./. chr1 182522583 . T . . LowGQX END=182522683 GT ./. chr1 182523745 . T . . LowGQX END=182523845 GT ./. chr1 182525126 . A . . LowGQX END=182525226 GT ./. chr1 182544476 . A . . LowGQX END=182544765 GT ./. chr1 182545340 . T . . LowGQX END=182545576 GT ./. chr1 182548996 . A . . LowGQX END=182549156 GT ./. chr1 182550309 . C . . LowGQX END=182550544 GT ./. chr1 182551137 . T . . LowGQX END=182551445 GT ./. chr1 182553165 . A . . LowGQX END=182553353 GT ./. chr1 182554411 . T . . LowGQX END=182555993 GT ./. chr1 182569425 . A . . LowGQX END=182569651 GT ./. chr1 182571029 . C . . LowGQX END=182571270 GT ./. chr1 182571538 . A . . LowGQX END=182571638 GT ./. chr1 182572362 . A . . LowGQX END=182572477 GT ./. chr1 182573263 . C . . LowGQX END=182573423 GT ./. chr1 182615868 . G . . LowGQX END=182616055 GT ./. chr1 182617270 . A . . LowGQX END=182617441 GT ./. chr1 182635087 . A . . LowGQX END=182635187 GT ./. chr1 182636005 . A . . LowGQX END=182636111 GT ./. chr1 182638722 . G . . LowGQX END=182638822 GT ./. chr1 182640779 . A . . LowGQX END=182640879 GT ./. chr1 182641907 . C . . LowGQX END=182642007 GT ./. chr1 182763451 . T . . LowGQX END=182763626 GT ./. chr1 182772782 . A . . LowGQX END=182772958 GT ./. chr1 182775229 . G . . LowGQX END=182775419 GT ./. chr1 182775493 . G . . LowGQX END=182775667 GT ./. chr1 182778319 . G . . LowGQX END=182778420 GT ./. chr1 182781240 . T . . LowGQX END=182781400 GT ./. chr1 182783866 . G . . LowGQX END=182784045 GT ./. chr1 182785798 . G . . LowGQX END=182785993 GT ./. chr1 182787625 . G . . LowGQX END=182788046 GT ./. chr1 182791199 . A . . LowGQX END=182791386 GT ./. chr1 182794865 . T . . LowGQX END=182795007 GT ./. chr1 182797808 . G . . LowGQX END=182798095 GT ./. chr1 182798716 . G . . LowGQX END=182798816 GT ./. chr1 182811700 . T . . LowGQX END=182811815 GT ./. chr1 182812427 . A . . LowGQX END=182812572 GT ./. chr1 182821366 . A . . LowGQX END=182821482 GT ./. chr1 182822439 . A . . LowGQX END=182822556 GT ./. chr1 182823163 . A . . LowGQX END=182823316 GT ./. chr1 182825641 . A . . LowGQX END=182825741 GT ./. chr1 182827237 . A . . LowGQX END=182827378 GT ./. chr1 182827681 . C . . LowGQX END=182827781 GT ./. chr1 182827866 . A . . LowGQX END=182828032 GT ./. chr1 182828164 . T . . LowGQX END=182828264 GT ./. chr1 182829126 . A . . LowGQX END=182829322 GT ./. chr1 182835577 . A . . LowGQX END=182835723 GT ./. chr1 182836088 . T . . LowGQX END=182836188 GT ./. chr1 182841470 . A . . LowGQX END=182841631 GT ./. chr1 182843987 . A . . LowGQX END=182844092 GT ./. chr1 182844273 . T . . LowGQX END=182844373 GT ./. chr1 182845183 . A . . LowGQX END=182845401 GT ./. chr1 182845580 . A . . LowGQX END=182845680 GT ./. chr1 182845952 . T . . LowGQX END=182846052 GT ./. chr1 182847121 . A . . LowGQX END=182847311 GT ./. chr1 182848383 . A . . LowGQX END=182848548 GT ./. chr1 182849630 . A . . LowGQX END=182849746 GT ./. chr1 182850397 . A . . LowGQX END=182850563 GT ./. chr1 182850653 . A . . LowGQX END=182850785 GT ./. chr1 182852272 . A . . LowGQX END=182852506 GT ./. chr1 182852653 . A . . LowGQX END=182852773 GT ./. chr1 182853746 . A . . LowGQX END=182853951 GT ./. chr1 182856216 . A . . LowGQX END=182856572 GT ./. chr1 182869116 . C . . LowGQX END=182869372 GT ./. chr1 182872172 . A . . LowGQX END=182872299 GT ./. chr1 182873313 . A . . LowGQX END=182873568 GT ./. chr1 182874599 . G . . LowGQX END=182874787 GT ./. chr1 182898780 . A . . LowGQX END=182898940 GT ./. chr1 182908309 . A . . LowGQX END=182908547 GT ./. chr1 182908596 . A . . LowGQX END=182908696 GT ./. chr1 182909462 . A . . LowGQX END=182909681 GT ./. chr1 182920451 . A . . LowGQX END=182920605 GT ./. chr1 182920986 . T . . LowGQX END=182921146 GT ./. chr1 182921862 . A . . LowGQX END=182922488 GT ./. chr1 182992846 . G . . LowGQX END=182993272 GT ./. chr1 183072461 . A . . LowGQX END=183072792 GT ./. chr1 183077369 . C . . LowGQX END=183077544 GT ./. chr1 183079621 . A . . LowGQX END=183079792 GT ./. chr1 183083654 . T . . LowGQX END=183083857 GT ./. chr1 183084653 . A . . LowGQX END=183084775 GT ./. chr1 183085710 . A . . LowGQX END=183085813 GT ./. chr1 183085900 . A . . LowGQX END=183086041 GT ./. chr1 183086453 . A . . LowGQX END=183086580 GT ./. chr1 183086667 . A . . LowGQX END=183086861 GT ./. chr1 183087167 . A . . LowGQX END=183087284 GT ./. chr1 183090856 . A . . LowGQX END=183091082 GT ./. chr1 183091196 . A . . LowGQX END=183091389 GT ./. chr1 183093764 . A . . LowGQX END=183094014 GT ./. chr1 183094500 . T . . LowGQX END=183094688 GT ./. chr1 183095253 . A . . LowGQX END=183095400 GT ./. chr1 183096359 . A . . LowGQX END=183096542 GT ./. chr1 183097727 . A . . LowGQX END=183097888 GT ./. chr1 183099477 . A . . LowGQX END=183099687 GT ./. chr1 183100424 . T . . LowGQX END=183100524 GT ./. chr1 183101533 . A . . LowGQX END=183101675 GT ./. chr1 183102539 . A . . LowGQX END=183102688 GT ./. chr1 183103793 . A . . LowGQX END=183103947 GT ./. chr1 183104175 . A . . LowGQX END=183104294 GT ./. chr1 183105519 . A . . LowGQX END=183105723 GT ./. chr1 183106802 . A . . LowGQX END=183106965 GT ./. chr1 183109537 . A . . LowGQX END=183109641 GT ./. chr1 183111667 . A . . LowGQX END=183111928 GT ./. chr1 183155437 . C . . LowGQX END=183155618 GT ./. chr1 183176965 . G . . LowGQX END=183177256 GT ./. chr1 183184537 . A . . LowGQX END=183184775 GT ./. chr1 183187474 . T . . LowGQX END=183187675 GT ./. chr1 183189909 . A . . LowGQX END=183190148 GT ./. chr1 183191173 . A . . LowGQX END=183191398 GT ./. chr1 183192219 . G . . LowGQX END=183192511 GT ./. chr1 183194692 . G . . LowGQX END=183194907 GT ./. chr1 183195782 . G . . LowGQX END=183196103 GT ./. chr1 183196599 . T . . LowGQX END=183196884 GT ./. chr1 183197458 . T . . LowGQX END=183197806 GT ./. chr1 183200045 . C . . LowGQX END=183200290 GT ./. chr1 183201271 . C . . LowGQX END=183201530 GT ./. chr1 183201736 . T . . LowGQX END=183202044 GT ./. chr1 183203451 . A . . LowGQX END=183203633 GT ./. chr1 183204659 . A . . LowGQX END=183204917 GT ./. chr1 183205544 . A . . LowGQX END=183205791 GT ./. chr1 183206436 . G . . LowGQX END=183206691 GT ./. chr1 183207391 . T . . LowGQX END=183207608 GT ./. chr1 183208448 . T . . LowGQX END=183208750 GT ./. chr1 183209124 . G . . LowGQX END=183209535 GT ./. chr1 183212231 . G . . LowGQX END=183212587 GT ./. chr1 183221774 . T . . LowGQX END=183221881 GT ./. chr1 183230121 . C . . LowGQX END=183230221 GT ./. chr1 183230335 . A . . LowGQX END=183230441 GT ./. chr1 183247677 . T . . LowGQX END=183247777 GT ./. chr1 183252981 . T . . LowGQX END=183253177 GT ./. chr1 183253836 . G . . LowGQX END=183253936 GT ./. chr1 183255795 . A . . LowGQX END=183255926 GT ./. chr1 183259253 . C . . LowGQX END=183259353 GT ./. chr1 183261849 . A . . LowGQX END=183262063 GT ./. chr1 183262835 . C . . LowGQX END=183262935 GT ./. chr1 183273790 . G . . LowGQX END=183273890 GT ./. chr1 183387311 . G . . LowGQX END=183387411 GT ./. chr1 183441661 . G . . LowGQX END=183441821 GT ./. chr1 183471410 . T . . LowGQX END=183471527 GT ./. chr1 183481880 . T . . LowGQX END=183482038 GT ./. chr1 183485007 . A . . LowGQX END=183485129 GT ./. chr1 183486731 . T . . LowGQX END=183486958 GT ./. chr1 183495729 . A . . LowGQX END=183495905 GT ./. chr1 183496745 . T . . LowGQX END=183496845 GT ./. chr1 183497077 . T . . LowGQX END=183497177 GT ./. chr1 183498025 . A . . LowGQX END=183498180 GT ./. chr1 183498531 . A . . LowGQX END=183498671 GT ./. chr1 183502297 . A . . LowGQX END=183502464 GT ./. chr1 183502809 . A . . LowGQX END=183502970 GT ./. chr1 183506266 . T . . LowGQX END=183506366 GT ./. chr1 183507496 . T . . LowGQX END=183507596 GT ./. chr1 183510117 . A . . LowGQX END=183510241 GT ./. chr1 183511209 . A . . LowGQX END=183511640 GT ./. chr1 183513486 . A . . LowGQX END=183513635 GT ./. chr1 183514063 . A . . LowGQX END=183514450 GT ./. chr1 183515099 . A . . LowGQX END=183515475 GT ./. chr1 183516237 . G . . LowGQX END=183516388 GT ./. chr1 183518334 . A . . LowGQX END=183518434 GT ./. chr1 183518897 . A . . LowGQX END=183519061 GT ./. chr1 183519884 . A . . LowGQX END=183520059 GT ./. chr1 183520138 . G . . LowGQX END=183520328 GT ./. chr1 183520951 . A . . LowGQX END=183521069 GT ./. chr1 183522111 . G . . LowGQX END=183522337 GT ./. chr1 183525202 . A . . LowGQX END=183525417 GT ./. chr1 183529180 . T . . LowGQX END=183529460 GT ./. chr1 183532279 . A . . LowGQX END=183532493 GT ./. chr1 183532518 . C . . LowGQX END=183532772 GT ./. chr1 183533083 . A . . LowGQX END=183533217 GT ./. chr1 183534788 . C . . LowGQX END=183534966 GT ./. chr1 183536004 . G . . LowGQX END=183536175 GT ./. chr1 183536288 . T . . LowGQX END=183536646 GT ./. chr1 183538226 . G . . LowGQX END=183538372 GT ./. chr1 183539859 . G . . LowGQX END=183540026 GT ./. chr1 183542269 . A . . LowGQX END=183542479 GT ./. chr1 183543571 . A . . LowGQX END=183543808 GT ./. chr1 183546683 . T . . LowGQX END=183546894 GT ./. chr1 183555979 . C . . LowGQX END=183556164 GT ./. chr1 183559240 . T . . LowGQX END=183559557 GT ./. chr1 183592549 . G . . LowGQX END=183592649 GT ./. chr1 183596649 . A . . LowGQX END=183596749 GT ./. chr1 183599594 . A . . LowGQX END=183599775 GT ./. chr1 183602155 . C . . LowGQX END=183602307 GT ./. chr1 183604650 . A . . LowGQX END=183604797 GT ./. chr1 183616811 . T . . LowGQX END=183617919 GT ./. chr1 183711291 . A . . LowGQX END=183711427 GT ./. chr1 183774395 . A . . LowGQX END=183774495 GT ./. chr1 183775507 . A . . LowGQX END=183775622 GT ./. chr1 183816698 . A . . LowGQX END=183816911 GT ./. chr1 183835119 . T . . LowGQX END=183835219 GT ./. chr1 183849748 . A . . LowGQX END=183849937 GT ./. chr1 183852918 . A . . LowGQX END=183853047 GT ./. chr1 183853855 . A . . LowGQX END=183854075 GT ./. chr1 183857606 . A . . LowGQX END=183857714 GT ./. chr1 183861204 . T . . LowGQX END=183861304 GT ./. chr1 183866937 . C . . LowGQX END=183867037 GT ./. chr1 183869278 . C . . LowGQX END=183869378 GT ./. chr1 183871669 . G . . LowGQX END=183871769 GT ./. chr1 183873982 . A . . LowGQX END=183874108 GT ./. chr1 183876141 . C . . LowGQX END=183876241 GT ./. chr1 183881214 . A . . LowGQX END=183881405 GT ./. chr1 183885578 . C . . LowGQX END=183885838 GT ./. chr1 183891354 . A . . LowGQX END=183891473 GT ./. chr1 183895237 . A . . LowGQX END=183895429 GT ./. chr1 183899343 . C . . LowGQX END=183899443 GT ./. chr1 183907893 . C . . LowGQX END=183908174 GT ./. chr1 183909713 . A . . LowGQX END=183909924 GT ./. chr1 183913328 . A . . LowGQX END=183913460 GT ./. chr1 183914564 . A . . LowGQX END=183914701 GT ./. chr1 183920139 . A . . LowGQX END=183920250 GT ./. chr1 183923885 . A . . LowGQX END=183923985 GT ./. chr1 183933033 . A . . LowGQX END=183933198 GT ./. chr1 183938401 . A . . LowGQX END=183938610 GT ./. chr1 183942698 . G . . LowGQX END=183942887 GT ./. chr1 183944229 . A . . LowGQX END=183944351 GT ./. chr1 183947542 . A . . LowGQX END=183947657 GT ./. chr1 184006217 . G . . LowGQX END=184006494 GT ./. chr1 184020888 . G . . LowGQX END=184021027 GT ./. chr1 184023479 . A . . LowGQX END=184023579 GT ./. chr1 184023860 . A . . LowGQX END=184024000 GT ./. chr1 184027247 . T . . LowGQX END=184027347 GT ./. chr1 184039729 . T . . LowGQX END=184039829 GT ./. chr1 184041289 . A . . LowGQX END=184041435 GT ./. chr1 184041869 . T . . LowGQX END=184042029 GT ./. chr1 184446641 . A . . LowGQX END=184446741 GT ./. chr1 184476660 . C . . LowGQX END=184476820 GT ./. chr1 184537527 . C . . LowGQX END=184537627 GT ./. chr1 184559862 . A . . LowGQX END=184559962 GT ./. chr1 184567516 . A . . LowGQX END=184567616 GT ./. chr1 184588570 . G . . LowGQX END=184588722 GT ./. chr1 184663195 . A . . LowGQX END=184663609 GT ./. chr1 184670605 . A . . LowGQX END=184670705 GT ./. chr1 184671943 . A . . LowGQX END=184672133 GT ./. chr1 184675775 . A . . LowGQX END=184675945 GT ./. chr1 184677274 . T . . LowGQX END=184677505 GT ./. chr1 184679526 . A . . LowGQX END=184679684 GT ./. chr1 184680855 . A . . LowGQX END=184681014 GT ./. chr1 184681535 . A . . LowGQX END=184681735 GT ./. chr1 184686020 . A . . LowGQX END=184686149 GT ./. chr1 184686612 . A . . LowGQX END=184686766 GT ./. chr1 184688288 . T . . LowGQX END=184688388 GT ./. chr1 184688575 . A . . LowGQX END=184688705 GT ./. chr1 184690364 . C . . LowGQX END=184690523 GT ./. chr1 184692823 . T . . LowGQX END=184692993 GT ./. chr1 184695387 . A . . LowGQX END=184695526 GT ./. chr1 184701969 . A . . LowGQX END=184702127 GT ./. chr1 184703613 . T . . LowGQX END=184703780 GT ./. chr1 184706129 . T . . LowGQX END=184706229 GT ./. chr1 184706743 . A . . LowGQX END=184706848 GT ./. chr1 184718599 . A . . LowGQX END=184718754 GT ./. chr1 184723591 . A . . LowGQX END=184723781 GT ./. chr1 184760131 . A . . LowGQX END=184760231 GT ./. chr1 184764002 . T . . LowGQX END=184764102 GT ./. chr1 184764109 . T . . LowGQX END=184765234 GT ./. chr1 184767211 . A . . LowGQX END=184767327 GT ./. chr1 184772717 . A . . LowGQX END=184772829 GT ./. chr1 184775047 . T . . LowGQX END=184775193 GT ./. chr1 184777124 . C . . LowGQX END=184777372 GT ./. chr1 184787770 . A . . LowGQX END=184787962 GT ./. chr1 184792299 . A . . LowGQX END=184792466 GT ./. chr1 184792770 . A . . LowGQX END=184792879 GT ./. chr1 184800979 . A . . LowGQX END=184801099 GT ./. chr1 184853765 . A . . LowGQX END=184853937 GT ./. chr1 184859240 . A . . LowGQX END=184859359 GT ./. chr1 184863207 . A . . LowGQX END=184863343 GT ./. chr1 184868310 . A . . LowGQX END=184868445 GT ./. chr1 184943352 . C . . LowGQX END=184943572 GT ./. chr1 185056680 . C . . LowGQX END=185056780 GT ./. chr1 185060709 . A . . LowGQX END=185060874 GT ./. chr1 185062191 . A . . LowGQX END=185062411 GT ./. chr1 185067202 . A . . LowGQX END=185067479 GT ./. chr1 185068901 . T . . LowGQX END=185069097 GT ./. chr1 185069330 . A . . LowGQX END=185069436 GT ./. chr1 185089149 . G . . LowGQX END=185089406 GT ./. chr1 185089513 . A . . LowGQX END=185089644 GT ./. chr1 185092917 . T . . LowGQX END=185093071 GT ./. chr1 185094071 . G . . LowGQX END=185094245 GT ./. chr1 185097738 . T . . LowGQX END=185097949 GT ./. chr1 185106556 . T . . LowGQX END=185106656 GT ./. chr1 185106736 . A . . LowGQX END=185106931 GT ./. chr1 185108497 . A . . LowGQX END=185108714 GT ./. chr1 185109103 . A . . LowGQX END=185109357 GT ./. chr1 185112479 . C . . LowGQX END=185112579 GT ./. chr1 185113036 . A . . LowGQX END=185113164 GT ./. chr1 185114569 . A . . LowGQX END=185114703 GT ./. chr1 185116297 . A . . LowGQX END=185116397 GT ./. chr1 185119509 . A . . LowGQX END=185119669 GT ./. chr1 185120955 . A . . LowGQX END=185121070 GT ./. chr1 185125537 . G . . LowGQX END=185125907 GT ./. chr1 185129966 . T . . LowGQX END=185130066 GT ./. chr1 185135695 . C . . LowGQX END=185135795 GT ./. chr1 185137400 . T . . LowGQX END=185137552 GT ./. chr1 185143502 . A . . LowGQX END=185144248 GT ./. chr1 185149503 . T . . LowGQX END=185149603 GT ./. chr1 185151076 . A . . LowGQX END=185151192 GT ./. chr1 185153373 . A . . LowGQX END=185153533 GT ./. chr1 185153862 . T . . LowGQX END=185154066 GT ./. chr1 185159678 . C . . LowGQX END=185159778 GT ./. chr1 185171744 . A . . LowGQX END=185171934 GT ./. chr1 185173800 . C . . LowGQX END=185173998 GT ./. chr1 185175755 . A . . LowGQX END=185175898 GT ./. chr1 185183637 . A . . LowGQX END=185183790 GT ./. chr1 185190979 . A . . LowGQX END=185191171 GT ./. chr1 185200667 . A . . LowGQX END=185200843 GT ./. chr1 185240383 . G . . LowGQX END=185240539 GT ./. chr1 185245719 . A . . LowGQX END=185245819 GT ./. chr1 185259804 . A . . LowGQX END=185259938 GT ./. chr1 185267165 . T . . LowGQX END=185267423 GT ./. chr1 185268816 . T . . LowGQX END=185269018 GT ./. chr1 185269129 . A . . LowGQX END=185269265 GT ./. chr1 185269347 . A . . LowGQX END=185269478 GT ./. chr1 185269567 . A . . LowGQX END=185269693 GT ./. chr1 185270102 . A . . LowGQX END=185270331 GT ./. chr1 185270564 . A . . LowGQX END=185270698 GT ./. chr1 185274666 . A . . LowGQX END=185274778 GT ./. chr1 185275568 . T . . LowGQX END=185275668 GT ./. chr1 185276095 . T . . LowGQX END=185276295 GT ./. chr1 185276619 . A . . LowGQX END=185276797 GT ./. chr1 185277074 . T . . LowGQX END=185277174 GT ./. chr1 185277920 . C . . LowGQX END=185278020 GT ./. chr1 185278133 . A . . LowGQX END=185278307 GT ./. chr1 185278513 . A . . LowGQX END=185278683 GT ./. chr1 185703861 . G . . LowGQX END=185704231 GT ./. chr1 185815107 . T . . LowGQX END=185815280 GT ./. chr1 185833551 . T . . LowGQX END=185833812 GT ./. chr1 185834822 . T . . LowGQX END=185835047 GT ./. chr1 185878418 . A . . LowGQX END=185878692 GT ./. chr1 185880755 . A . . LowGQX END=185880964 GT ./. chr1 185891460 . A . . LowGQX END=185891683 GT ./. chr1 185892471 . A . . LowGQX END=185892837 GT ./. chr1 185894128 . T . . LowGQX END=185894375 GT ./. chr1 185897627 . A . . LowGQX END=185897851 GT ./. chr1 185902630 . G . . LowGQX END=185903008 GT ./. chr1 185931599 . A . . LowGQX END=185931843 GT ./. chr1 185932849 . T . . LowGQX END=185933079 GT ./. chr1 185934883 . C . . LowGQX END=185935099 GT ./. chr1 185939416 . A . . LowGQX END=185939677 GT ./. chr1 185946868 . A . . LowGQX END=185947165 GT ./. chr1 185950059 . G . . LowGQX END=185950257 GT ./. chr1 185951343 . T . . LowGQX END=185951573 GT ./. chr1 185953250 . C . . LowGQX END=185953497 GT ./. chr1 185956513 . T . . LowGQX END=185956728 GT ./. chr1 185958569 . T . . LowGQX END=185958831 GT ./. chr1 185959356 . T . . LowGQX END=185959627 GT ./. chr1 185962263 . A . . LowGQX END=185962497 GT ./. chr1 185963896 . A . . LowGQX END=185964271 GT ./. chr1 185966510 . T . . LowGQX END=185966708 GT ./. chr1 185969126 . T . . LowGQX END=185969423 GT ./. chr1 185970379 . A . . LowGQX END=185970612 GT ./. chr1 185970675 . A . . LowGQX END=185970925 GT ./. chr1 185972799 . T . . LowGQX END=185973028 GT ./. chr1 185976209 . A . . LowGQX END=185976466 GT ./. chr1 185984240 . T . . LowGQX END=185984621 GT ./. chr1 185985039 . T . . LowGQX END=185985423 GT ./. chr1 185986044 . G . . LowGQX END=185986255 GT ./. chr1 185987264 . T . . LowGQX END=185987536 GT ./. chr1 185988622 . T . . LowGQX END=185988879 GT ./. chr1 185992111 . A . . LowGQX END=185992337 GT ./. chr1 186007015 . G . . LowGQX END=186007219 GT ./. chr1 186007910 . T . . LowGQX END=186008189 GT ./. chr1 186008809 . A . . LowGQX END=186009063 GT ./. chr1 186010094 . C . . LowGQX END=186010320 GT ./. chr1 186014769 . A . . LowGQX END=186015047 GT ./. chr1 186017824 . A . . LowGQX END=186018023 GT ./. chr1 186022033 . G . . LowGQX END=186022258 GT ./. chr1 186022906 . A . . LowGQX END=186023170 GT ./. chr1 186024474 . T . . LowGQX END=186024858 GT ./. chr1 186026315 . T . . LowGQX END=186026585 GT ./. chr1 186030932 . A . . LowGQX END=186031148 GT ./. chr1 186031595 . A . . LowGQX END=186031784 GT ./. chr1 186034319 . T . . LowGQX END=186034613 GT ./. chr1 186036915 . A . . LowGQX END=186037191 GT ./. chr1 186038744 . T . . LowGQX END=186038960 GT ./. chr1 186039693 . C . . LowGQX END=186039941 GT ./. chr1 186043822 . A . . LowGQX END=186044075 GT ./. chr1 186045509 . C . . LowGQX END=186045806 GT ./. chr1 186047188 . T . . LowGQX END=186047404 GT ./. chr1 186050288 . T . . LowGQX END=186050578 GT ./. chr1 186051946 . C . . LowGQX END=186052145 GT ./. chr1 186055327 . A . . LowGQX END=186055591 GT ./. chr1 186056298 . G . . LowGQX END=186056514 GT ./. chr1 186056524 . T . . LowGQX END=186056829 GT ./. chr1 186057013 . T . . LowGQX END=186057197 GT ./. chr1 186057226 . C . . LowGQX END=186057460 GT ./. chr1 186057687 . T . . LowGQX END=186057939 GT ./. chr1 186059839 . G . . LowGQX END=186060101 GT ./. chr1 186062215 . T . . LowGQX END=186062442 GT ./. chr1 186062567 . T . . LowGQX END=186062853 GT ./. chr1 186063357 . T . . LowGQX END=186063557 GT ./. chr1 186064324 . T . . LowGQX END=186064705 GT ./. chr1 186072553 . A . . LowGQX END=186072852 GT ./. chr1 186075965 . A . . LowGQX END=186076149 GT ./. chr1 186077542 . G . . LowGQX END=186077781 GT ./. chr1 186081893 . T . . LowGQX END=186082137 GT ./. chr1 186083060 . G . . LowGQX END=186083307 GT ./. chr1 186083900 . A . . LowGQX END=186084130 GT ./. chr1 186084339 . G . . LowGQX END=186084598 GT ./. chr1 186086075 . A . . LowGQX END=186086299 GT ./. chr1 186086540 . A . . LowGQX END=186086807 GT ./. chr1 186088272 . C . . LowGQX END=186088482 GT ./. chr1 186088826 . G . . LowGQX END=186089066 GT ./. chr1 186089092 . A . . LowGQX END=186089329 GT ./. chr1 186092032 . A . . LowGQX END=186092404 GT ./. chr1 186094685 . G . . LowGQX END=186094978 GT ./. chr1 186097159 . T . . LowGQX END=186097475 GT ./. chr1 186099047 . A . . LowGQX END=186099284 GT ./. chr1 186099588 . A . . LowGQX END=186099881 GT ./. chr1 186101409 . G . . LowGQX END=186101593 GT ./. chr1 186105749 . A . . LowGQX END=186106121 GT ./. chr1 186106579 . A . . LowGQX END=186106852 GT ./. chr1 186106883 . G . . LowGQX END=186107156 GT ./. chr1 186113254 . T . . LowGQX END=186113527 GT ./. chr1 186113614 . A . . LowGQX END=186113887 GT ./. chr1 186114484 . A . . LowGQX END=186114757 GT ./. chr1 186114834 . A . . LowGQX END=186115107 GT ./. chr1 186120281 . T . . LowGQX END=186120533 GT ./. chr1 186120687 . A . . LowGQX END=186120927 GT ./. chr1 186121831 . T . . LowGQX END=186122055 GT ./. chr1 186122831 . A . . LowGQX END=186123171 GT ./. chr1 186134192 . G . . LowGQX END=186134357 GT ./. chr1 186135265 . G . . LowGQX END=186135487 GT ./. chr1 186135889 . G . . LowGQX END=186136126 GT ./. chr1 186140418 . A . . LowGQX END=186140634 GT ./. chr1 186141087 . A . . LowGQX END=186141315 GT ./. chr1 186143595 . C . . LowGQX END=186143826 GT ./. chr1 186147497 . G . . LowGQX END=186147950 GT ./. chr1 186151249 . T . . LowGQX END=186151471 GT ./. chr1 186156964 . C . . LowGQX END=186157193 GT ./. chr1 186158593 . T . . LowGQX END=186159062 GT ./. chr1 186265957 . A . . LowGQX END=186266135 GT ./. chr1 186269172 . C . . LowGQX END=186269397 GT ./. chr1 186270673 . G . . LowGQX END=186270895 GT ./. chr1 186273189 . T . . LowGQX END=186273441 GT ./. chr1 186273875 . T . . LowGQX END=186274106 GT ./. chr1 186275399 . T . . LowGQX END=186278324 GT ./. chr1 186278874 . G . . LowGQX END=186279054 GT ./. chr1 186280115 . T . . LowGQX END=186280354 GT ./. chr1 186280521 . A . . LowGQX END=186280780 GT ./. chr1 186281256 . G . . LowGQX END=186281556 GT ./. chr1 186281850 . T . . LowGQX END=186282078 GT ./. chr1 186282762 . T . . LowGQX END=186282962 GT ./. chr1 186283081 . G . . LowGQX END=186283181 GT ./. chr1 186283759 . A . . LowGQX END=186283859 GT ./. chr1 186286562 . C . . LowGQX END=186286735 GT ./. chr1 186287577 . A . . LowGQX END=186287738 GT ./. chr1 186287863 . A . . LowGQX END=186287963 GT ./. chr1 186289442 . A . . LowGQX END=186289553 GT ./. chr1 186291388 . C . . LowGQX END=186291548 GT ./. chr1 186291635 . T . . LowGQX END=186291735 GT ./. chr1 186292805 . G . . LowGQX END=186293016 GT ./. chr1 186294892 . T . . LowGQX END=186294992 GT ./. chr1 186295234 . A . . LowGQX END=186295370 GT ./. chr1 186296590 . A . . LowGQX END=186296795 GT ./. chr1 186300622 . T . . LowGQX END=186300722 GT ./. chr1 186301325 . A . . LowGQX END=186301505 GT ./. chr1 186302252 . A . . LowGQX END=186302529 GT ./. chr1 186303455 . A . . LowGQX END=186303668 GT ./. chr1 186304181 . T . . LowGQX END=186304281 GT ./. chr1 186304468 . A . . LowGQX END=186304678 GT ./. chr1 186305626 . A . . LowGQX END=186305829 GT ./. chr1 186306143 . A . . LowGQX END=186306291 GT ./. chr1 186307163 . A . . LowGQX END=186307378 GT ./. chr1 186308772 . A . . LowGQX END=186308907 GT ./. chr1 186310158 . A . . LowGQX END=186310294 GT ./. chr1 186310382 . A . . LowGQX END=186310524 GT ./. chr1 186312456 . A . . LowGQX END=186312608 GT ./. chr1 186313036 . A . . LowGQX END=186313225 GT ./. chr1 186313505 . A . . LowGQX END=186313713 GT ./. chr1 186314710 . A . . LowGQX END=186314831 GT ./. chr1 186315265 . A . . LowGQX END=186315422 GT ./. chr1 186316422 . A . . LowGQX END=186316593 GT ./. chr1 186319353 . A . . LowGQX END=186319523 GT ./. chr1 186320460 . A . . LowGQX END=186320605 GT ./. chr1 186321066 . A . . LowGQX END=186321245 GT ./. chr1 186322818 . A . . LowGQX END=186322985 GT ./. chr1 186324510 . A . . LowGQX END=186324693 GT ./. chr1 186324725 . G . . LowGQX END=186324903 GT ./. chr1 186325416 . A . . LowGQX END=186325584 GT ./. chr1 186326525 . T . . LowGQX END=186326758 GT ./. chr1 186327673 . A . . LowGQX END=186327833 GT ./. chr1 186328859 . A . . LowGQX END=186329189 GT ./. chr1 186329401 . T . . LowGQX END=186329501 GT ./. chr1 186329855 . C . . LowGQX END=186330040 GT ./. chr1 186330748 . A . . LowGQX END=186330848 GT ./. chr1 186330912 . G . . LowGQX END=186331012 GT ./. chr1 186331417 . T . . LowGQX END=186331568 GT ./. chr1 186331967 . A . . LowGQX END=186332157 GT ./. chr1 186332422 . G . . LowGQX END=186332580 GT ./. chr1 186337016 . A . . LowGQX END=186337117 GT ./. chr1 186340089 . A . . LowGQX END=186340189 GT ./. chr1 186342489 . A . . LowGQX END=186342598 GT ./. chr1 186344008 . A . . LowGQX END=186344319 GT ./. chr1 186344676 . A . . LowGQX END=186344776 GT ./. chr1 186348917 . A . . LowGQX END=186349017 GT ./. chr1 186352153 . G . . LowGQX END=186352289 GT ./. chr1 186355059 . C . . LowGQX END=186355218 GT ./. chr1 186357573 . G . . LowGQX END=186357681 GT ./. chr1 186358629 . C . . LowGQX END=186358788 GT ./. chr1 186359802 . A . . LowGQX END=186359984 GT ./. chr1 186360767 . T . . LowGQX END=186360926 GT ./. chr1 186363008 . A . . LowGQX END=186363163 GT ./. chr1 186367444 . G . . LowGQX END=186367574 GT ./. chr1 186368081 . T . . LowGQX END=186368181 GT ./. chr1 186368290 . G . . LowGQX END=186368390 GT ./. chr1 186370137 . G . . LowGQX END=186370313 GT ./. chr1 186375214 . G . . LowGQX END=186375401 GT ./. chr1 186386625 . A . . LowGQX END=186386787 GT ./. chr1 186388125 . T . . LowGQX END=186388225 GT ./. chr1 186413109 . C . . LowGQX END=186413641 GT ./. chr1 186415556 . A . . LowGQX END=186415712 GT ./. chr1 186418512 . T . . LowGQX END=186418612 GT ./. chr1 186643483 . T . . LowGQX END=186643897 GT ./. chr1 186644349 . A . . LowGQX END=186644531 GT ./. chr1 186645028 . A . . LowGQX END=186645319 GT ./. chr1 186645597 . A . . LowGQX END=186645848 GT ./. chr1 186645957 . A . . LowGQX END=186646057 GT ./. chr1 186646779 . A . . LowGQX END=186646979 GT ./. chr1 186647391 . A . . LowGQX END=186647539 GT ./. chr1 186648188 . A . . LowGQX END=186648336 GT ./. chr1 186648452 . A . . LowGQX END=186648573 GT ./. chr1 186649287 . T . . LowGQX END=186649447 GT ./. chr1 186823436 . T . . LowGQX END=186823573 GT ./. chr1 186839516 . G . . LowGQX END=186839700 GT ./. chr1 186839810 . G . . LowGQX END=186839910 GT ./. chr1 186862092 . A . . LowGQX END=186862343 GT ./. chr1 186863179 . C . . LowGQX END=186863395 GT ./. chr1 186876046 . T . . LowGQX END=186876186 GT ./. chr1 186880329 . A . . LowGQX END=186880573 GT ./. chr1 186901844 . T . . LowGQX END=186902083 GT ./. chr1 186908089 . T . . LowGQX END=186908414 GT ./. chr1 186909061 . C . . LowGQX END=186909278 GT ./. chr1 186915718 . G . . LowGQX END=186916145 GT ./. chr1 186919738 . T . . LowGQX END=186919912 GT ./. chr1 186925183 . T . . LowGQX END=186925528 GT ./. chr1 186934490 . A . . LowGQX END=186934777 GT ./. chr1 186946674 . A . . LowGQX END=186946972 GT ./. chr1 186948396 . A . . LowGQX END=186948656 GT ./. chr1 186957458 . T . . LowGQX END=186957692 GT ./. chr1 187610517 . T . . LowGQX END=187610617 GT ./. chr1 187610750 . G . . LowGQX END=187611009 GT ./. chr1 190067146 . G . . LowGQX END=190068267 GT ./. chr1 190129796 . A . . LowGQX END=190130023 GT ./. chr1 190195210 . A . . LowGQX END=190195451 GT ./. chr1 190203500 . A . . LowGQX END=190203610 GT ./. chr1 190233982 . A . . LowGQX END=190234213 GT ./. chr1 190250688 . A . . LowGQX END=190250883 GT ./. chr1 190423783 . A . . LowGQX END=190424023 GT ./. chr1 192127766 . A . . LowGQX END=192127936 GT ./. chr1 192128348 . A . . LowGQX END=192128454 GT ./. chr1 192129489 . C . . LowGQX END=192129589 GT ./. chr1 192150420 . A . . LowGQX END=192150610 GT ./. chr1 192153425 . A . . LowGQX END=192153687 GT ./. chr1 192312123 . A . . LowGQX END=192312223 GT ./. chr1 192316432 . G . . LowGQX END=192316532 GT ./. chr1 192321175 . A . . LowGQX END=192321346 GT ./. chr1 192334989 . T . . LowGQX END=192335309 GT ./. chr1 192544921 . C . . LowGQX END=192545062 GT ./. chr1 192545406 . C . . LowGQX END=192545506 GT ./. chr1 192545885 . T . . LowGQX END=192545985 GT ./. chr1 192547350 . A . . LowGQX END=192547582 GT ./. chr1 192548265 . A . . LowGQX END=192548465 GT ./. chr1 192613448 . T . . LowGQX END=192613548 GT ./. chr1 192617037 . T . . LowGQX END=192617137 GT ./. chr1 192627329 . A . . LowGQX END=192627500 GT ./. chr1 192628466 . A . . LowGQX END=192628666 GT ./. chr1 192778151 . T . . LowGQX END=192778363 GT ./. chr1 192779245 . C . . LowGQX END=192779613 GT ./. chr1 192780060 . T . . LowGQX END=192780329 GT ./. chr1 192780481 . T . . LowGQX END=192780778 GT ./. chr1 192985399 . T . . LowGQX END=192985554 GT ./. chr1 192987896 . T . . LowGQX END=192987996 GT ./. chr1 192989442 . A . . LowGQX END=192989632 GT ./. chr1 192990175 . T . . LowGQX END=192990328 GT ./. chr1 192992054 . A . . LowGQX END=192992172 GT ./. chr1 192992922 . C . . LowGQX END=192993079 GT ./. chr1 192996935 . T . . LowGQX END=192997095 GT ./. chr1 192997143 . A . . LowGQX END=192997297 GT ./. chr1 192998307 . A . . LowGQX END=192998442 GT ./. chr1 192998499 . T . . LowGQX END=192998599 GT ./. chr1 192998660 . A . . LowGQX END=192998790 GT ./. chr1 193018874 . A . . LowGQX END=193018984 GT ./. chr1 193020866 . A . . LowGQX END=193020966 GT ./. chr1 193028313 . A . . LowGQX END=193028427 GT ./. chr1 193028543 . C . . LowGQX END=193028646 GT ./. chr1 193028667 . T . . LowGQX END=193029129 GT ./. chr1 193038183 . A . . LowGQX END=193038767 GT ./. chr1 193039667 . T . . LowGQX END=193039767 GT ./. chr1 193044948 . A . . LowGQX END=193045173 GT ./. chr1 193045589 . T . . LowGQX END=193045780 GT ./. chr1 193046041 . A . . LowGQX END=193046183 GT ./. chr1 193050492 . A . . LowGQX END=193050662 GT ./. chr1 193051264 . T . . LowGQX END=193051432 GT ./. chr1 193051650 . G . . LowGQX END=193051841 GT ./. chr1 193053707 . A . . LowGQX END=193053864 GT ./. chr1 193054076 . T . . LowGQX END=193054176 GT ./. chr1 193060689 . A . . LowGQX END=193060849 GT ./. chr1 193065753 . C . . LowGQX END=193065892 GT ./. chr1 193066712 . A . . LowGQX END=193066893 GT ./. chr1 193070193 . A . . LowGQX END=193070353 GT ./. chr1 193074351 . C . . LowGQX END=193074515 GT ./. chr1 193074645 . A . . LowGQX END=193074771 GT ./. chr1 193090827 . G . . LowGQX END=193090987 GT ./. chr1 193091280 . G . . LowGQX END=193091513 GT ./. chr1 193094191 . A . . LowGQX END=193094399 GT ./. chr1 193099253 . T . . LowGQX END=193099425 GT ./. chr1 193104470 . A . . LowGQX END=193104771 GT ./. chr1 193105572 . G . . LowGQX END=193105724 GT ./. chr1 193107164 . C . . LowGQX END=193107355 GT ./. chr1 193110929 . T . . LowGQX END=193111248 GT ./. chr1 193116946 . T . . LowGQX END=193117147 GT ./. chr1 193119383 . A . . LowGQX END=193119564 GT ./. chr1 193121459 . T . . LowGQX END=193121626 GT ./. chr1 193149422 . T . . LowGQX END=193150695 GT ./. chr1 193172874 . T . . LowGQX END=193173034 GT ./. chr1 193181144 . A . . LowGQX END=193181282 GT ./. chr1 193181469 . A . . LowGQX END=193181659 GT ./. chr1 193202072 . T . . LowGQX END=193202336 GT ./. chr1 193205335 . A . . LowGQX END=193205528 GT ./. chr1 193218809 . T . . LowGQX END=193219053 GT ./. chr1 193219755 . A . . LowGQX END=193219894 GT ./. chr1 196197352 . T . . LowGQX END=196197468 GT ./. chr1 196205109 . A . . LowGQX END=196205209 GT ./. chr1 196227271 . C . . LowGQX END=196227627 GT ./. chr1 196227744 . A . . LowGQX END=196227844 GT ./. chr1 196242499 . T . . LowGQX END=196242659 GT ./. chr1 196249938 . T . . LowGQX END=196250121 GT ./. chr1 196251395 . T . . LowGQX END=196251495 GT ./. chr1 196254785 . A . . LowGQX END=196254891 GT ./. chr1 196274310 . A . . LowGQX END=196274478 GT ./. chr1 196285020 . A . . LowGQX END=196285159 GT ./. chr1 196286347 . T . . LowGQX END=196286447 GT ./. chr1 196288600 . A . . LowGQX END=196288700 GT ./. chr1 196295845 . A . . LowGQX END=196296035 GT ./. chr1 196300284 . A . . LowGQX END=196300444 GT ./. chr1 196302975 . A . . LowGQX END=196303193 GT ./. chr1 196309469 . A . . LowGQX END=196309703 GT ./. chr1 196311207 . A . . LowGQX END=196311361 GT ./. chr1 196342218 . T . . LowGQX END=196342381 GT ./. chr1 196367691 . A . . LowGQX END=196367804 GT ./. chr1 196392162 . A . . LowGQX END=196392262 GT ./. chr1 196394980 . A . . LowGQX END=196395121 GT ./. chr1 196397233 . A . . LowGQX END=196397402 GT ./. chr1 196398705 . A . . LowGQX END=196398890 GT ./. chr1 196434421 . A . . LowGQX END=196434575 GT ./. chr1 196436825 . A . . LowGQX END=196436925 GT ./. chr1 196438052 . A . . LowGQX END=196438212 GT ./. chr1 196448237 . A . . LowGQX END=196448389 GT ./. chr1 196451379 . C . . LowGQX END=196451536 GT ./. chr1 196458916 . A . . LowGQX END=196459070 GT ./. chr1 196461320 . A . . LowGQX END=196461482 GT ./. chr1 196577343 . A . . LowGQX END=196577443 GT ./. chr1 196621187 . A . . LowGQX END=196621357 GT ./. chr1 196642057 . G . . LowGQX END=196642345 GT ./. chr1 196642936 . A . . LowGQX END=196643144 GT ./. chr1 196645068 . C . . LowGQX END=196645247 GT ./. chr1 196646555 . A . . LowGQX END=196646849 GT ./. chr1 196648702 . C . . LowGQX END=196648975 GT ./. chr1 196654143 . T . . LowGQX END=196654419 GT ./. chr1 196658499 . G . . LowGQX END=196658796 GT ./. chr1 196659142 . A . . LowGQX END=196659421 GT ./. chr1 196659463 . T . . LowGQX END=196659563 GT ./. chr1 196670385 . G . . LowGQX END=196670485 GT ./. chr1 196682814 . A . . LowGQX END=196683099 GT ./. chr1 196684672 . T . . LowGQX END=196684951 GT ./. chr1 196694200 . T . . LowGQX END=196694479 GT ./. chr1 196695549 . T . . LowGQX END=196695834 GT ./. chr1 196695840 . A . . LowGQX END=196696122 GT ./. chr1 196697425 . T . . LowGQX END=196697704 GT ./. chr1 196705903 . T . . LowGQX END=196706188 GT ./. chr1 196706554 . A . . LowGQX END=196706842 GT ./. chr1 196709698 . A . . LowGQX END=196709974 GT ./. chr1 196710954 . T . . LowGQX END=196711233 GT ./. chr1 196712531 . T . . LowGQX END=196712810 GT ./. chr1 196714896 . T . . LowGQX END=196715181 GT ./. chr1 196716190 . G . . LowGQX END=196716495 GT ./. chr1 196743954 . A . . LowGQX END=196744126 GT ./. chr1 196748241 . T . . LowGQX END=196748538 GT ./. chr1 196748876 . A . . LowGQX END=196749155 GT ./. chr1 196757295 . A . . LowGQX END=196757580 GT ./. chr1 196757813 . A . . LowGQX END=196757968 GT ./. chr1 196759124 . T . . LowGQX END=196759409 GT ./. chr1 196762396 . T . . LowGQX END=196762695 GT ./. chr1 196763611 . T . . LowGQX END=196763771 GT ./. chr1 196788864 . T . . LowGQX END=196789084 GT ./. chr1 196794556 . T . . LowGQX END=196794853 GT ./. chr1 196795908 . C . . LowGQX END=196796187 GT ./. chr1 196797149 . T . . LowGQX END=196797428 GT ./. chr1 196799579 . T . . LowGQX END=196799864 GT ./. chr1 196800855 . C . . LowGQX END=196801181 GT ./. chr1 196857260 . A . . LowGQX END=196857360 GT ./. chr1 196871546 . A . . LowGQX END=196871748 GT ./. chr1 196874237 . G . . LowGQX END=196874437 GT ./. chr1 196875990 . G . . LowGQX END=196876190 GT ./. chr1 196876445 . G . . LowGQX END=196876629 GT ./. chr1 196879410 . G . . LowGQX END=196879609 GT ./. chr1 196881868 . A . . LowGQX END=196882055 GT ./. chr1 196883623 . A . . LowGQX END=196883804 GT ./. chr1 196884084 . A . . LowGQX END=196884271 GT ./. chr1 196887338 . A . . LowGQX END=196887539 GT ./. chr1 196912990 . A . . LowGQX END=196913090 GT ./. chr1 196918583 . A . . LowGQX END=196918782 GT ./. chr1 196919980 . A . . LowGQX END=196920161 GT ./. chr1 196927019 . A . . LowGQX END=196927206 GT ./. chr1 196928009 . A . . LowGQX END=196928213 GT ./. chr1 196946709 . G . . LowGQX END=196946904 GT ./. chr1 196951964 . C . . LowGQX END=196952261 GT ./. chr1 196953040 . C . . LowGQX END=196953319 GT ./. chr1 196963159 . A . . LowGQX END=196963438 GT ./. chr1 196964796 . T . . LowGQX END=196965081 GT ./. chr1 196965101 . C . . LowGQX END=196965383 GT ./. chr1 196967207 . A . . LowGQX END=196967486 GT ./. chr1 196971561 . G . . LowGQX END=196971846 GT ./. chr1 196973740 . T . . LowGQX END=196974025 GT ./. chr1 196977566 . G . . LowGQX END=196977865 GT ./. chr1 197008457 . A . . LowGQX END=197008593 GT ./. chr1 197009601 . T . . LowGQX END=197009917 GT ./. chr1 197019776 . A . . LowGQX END=197020061 GT ./. chr1 197021713 . T . . LowGQX END=197022016 GT ./. chr1 197024794 . A . . LowGQX END=197025079 GT ./. chr1 197026092 . A . . LowGQX END=197026647 GT ./. chr1 197029445 . T . . LowGQX END=197029724 GT ./. chr1 197029978 . G . . LowGQX END=197030257 GT ./. chr1 197030863 . A . . LowGQX END=197031151 GT ./. chr1 197031936 . A . . LowGQX END=197032239 GT ./. chr1 197036239 . A . . LowGQX END=197036405 GT ./. chr1 197053403 . A . . LowGQX END=197053608 GT ./. chr1 197055882 . A . . LowGQX END=197056154 GT ./. chr1 197057310 . A . . LowGQX END=197057614 GT ./. chr1 197059009 . G . . LowGQX END=197059266 GT ./. chr1 197059275 . G . . LowGQX END=197059570 GT ./. chr1 197059929 . G . . LowGQX END=197060223 GT ./. chr1 197060986 . T . . LowGQX END=197061238 GT ./. chr1 197062131 . T . . LowGQX END=197062443 GT ./. chr1 197063163 . T . . LowGQX END=197063362 GT ./. chr1 197065077 . G . . LowGQX END=197065346 GT ./. chr1 197069510 . T . . LowGQX END=197074367 GT ./. chr1 197086868 . A . . LowGQX END=197087165 GT ./. chr1 197090994 . T . . LowGQX END=197091225 GT ./. chr1 197091238 . T . . LowGQX END=197091777 GT ./. chr1 197093189 . T . . LowGQX END=197093513 GT ./. chr1 197093949 . A . . LowGQX END=197094373 GT ./. chr1 197097569 . A . . LowGQX END=197097847 GT ./. chr1 197098266 . A . . LowGQX END=197098499 GT ./. chr1 197098994 . A . . LowGQX END=197099238 GT ./. chr1 197101364 . A . . LowGQX END=197101534 GT ./. chr1 197102429 . C . . LowGQX END=197102777 GT ./. chr1 197104175 . T . . LowGQX END=197104424 GT ./. chr1 197108846 . G . . LowGQX END=197109053 GT ./. chr1 197111410 . A . . LowGQX END=197112992 GT ./. chr1 197113036 . T . . LowGQX END=197113282 GT ./. chr1 197115220 . A . . LowGQX END=197115619 GT ./. chr1 197128487 . A . . LowGQX END=197129147 GT ./. chr1 197141285 . T . . LowGQX END=197141385 GT ./. chr1 197144138 . A . . LowGQX END=197144248 GT ./. chr1 197145692 . A . . LowGQX END=197145851 GT ./. chr1 197147545 . A . . LowGQX END=197147645 GT ./. chr1 197150076 . A . . LowGQX END=197150250 GT ./. chr1 197157380 . T . . LowGQX END=197157572 GT ./. chr1 197159820 . A . . LowGQX END=197159977 GT ./. chr1 197160820 . G . . LowGQX END=197161032 GT ./. chr1 197168482 . A . . LowGQX END=197169606 GT ./. chr1 197237492 . C . . LowGQX END=197237664 GT ./. chr1 197297501 . A . . LowGQX END=197298185 GT ./. chr1 197313360 . A . . LowGQX END=197313658 GT ./. chr1 197316419 . C . . LowGQX END=197316661 GT ./. chr1 197325910 . T . . LowGQX END=197326234 GT ./. chr1 197383012 . A . . LowGQX END=197383131 GT ./. chr1 197390079 . T . . LowGQX END=197391138 GT ./. chr1 197396533 . C . . LowGQX END=197397183 GT ./. chr1 197398103 . G . . LowGQX END=197398239 GT ./. chr1 197398528 . T . . LowGQX END=197398796 GT ./. chr1 197403785 . C . . LowGQX END=197404794 GT ./. chr1 197407626 . G . . LowGQX END=197407858 GT ./. chr1 197411245 . C . . LowGQX END=197411546 GT ./. chr1 197446630 . G . . LowGQX END=197446730 GT ./. chr1 197446743 . T . . LowGQX END=197447061 GT ./. chr1 197479588 . A . . LowGQX END=197480105 GT ./. chr1 197480856 . A . . LowGQX END=197481077 GT ./. chr1 197481993 . T . . LowGQX END=197482093 GT ./. chr1 197509042 . A . . LowGQX END=197509204 GT ./. chr1 197510068 . A . . LowGQX END=197510168 GT ./. chr1 197514980 . T . . LowGQX END=197515136 GT ./. chr1 197515782 . A . . LowGQX END=197515933 GT ./. chr1 197522069 . A . . LowGQX END=197522245 GT ./. chr1 197552280 . A . . LowGQX END=197552386 GT ./. chr1 197564336 . A . . LowGQX END=197564466 GT ./. chr1 197576126 . G . . LowGQX END=197576307 GT ./. chr1 197580979 . G . . LowGQX END=197581134 GT ./. chr1 197586787 . A . . LowGQX END=197586947 GT ./. chr1 197611839 . A . . LowGQX END=197611954 GT ./. chr1 197614797 . A . . LowGQX END=197614948 GT ./. chr1 197616114 . G . . LowGQX END=197616265 GT ./. chr1 197621303 . G . . LowGQX END=197621456 GT ./. chr1 197627358 . A . . LowGQX END=197627515 GT ./. chr1 197641165 . A . . LowGQX END=197641289 GT ./. chr1 197643168 . T . . LowGQX END=197643325 GT ./. chr1 197684079 . A . . LowGQX END=197684233 GT ./. chr1 197704692 . T . . LowGQX END=197704927 GT ./. chr1 197741980 . A . . LowGQX END=197742080 GT ./. chr1 197742104 . A . . LowGQX END=197742204 GT ./. chr1 197744167 . C . . LowGQX END=197744327 GT ./. chr1 197871779 . C . . LowGQX END=197872044 GT ./. chr1 197874925 . G . . LowGQX END=197875028 GT ./. chr1 197876208 . C . . LowGQX END=197876365 GT ./. chr1 197881626 . A . . LowGQX END=197881726 GT ./. chr1 197885795 . A . . LowGQX END=197885895 GT ./. chr1 197886489 . C . . LowGQX END=197886689 GT ./. chr1 197886932 . T . . LowGQX END=197887130 GT ./. chr1 197887422 . A . . LowGQX END=197887522 GT ./. chr1 197889100 . A . . LowGQX END=197889307 GT ./. chr1 197890432 . A . . LowGQX END=197890792 GT ./. chr1 197896719 . A . . LowGQX END=197896926 GT ./. chr1 197898130 . A . . LowGQX END=197898392 GT ./. chr1 197901027 . T . . LowGQX END=197901127 GT ./. chr1 198201690 . A . . LowGQX END=198201790 GT ./. chr1 198222168 . A . . LowGQX END=198222313 GT ./. chr1 198225457 . G . . LowGQX END=198225620 GT ./. chr1 198231633 . T . . LowGQX END=198231787 GT ./. chr1 198233253 . A . . LowGQX END=198233413 GT ./. chr1 198247089 . A . . LowGQX END=198247249 GT ./. chr1 198248082 . A . . LowGQX END=198248194 GT ./. chr1 198262013 . T . . LowGQX END=198262173 GT ./. chr1 198266255 . A . . LowGQX END=198266415 GT ./. chr1 198288540 . A . . LowGQX END=198288655 GT ./. chr1 198492489 . C . . LowGQX END=198492697 GT ./. chr1 198498152 . T . . LowGQX END=198498314 GT ./. chr1 198505782 . G . . LowGQX END=198505882 GT ./. chr1 198509690 . G . . LowGQX END=198509790 GT ./. chr1 198608352 . T . . LowGQX END=198608523 GT ./. chr1 198661415 . G . . LowGQX END=198661525 GT ./. chr1 198663116 . C . . LowGQX END=198663311 GT ./. chr1 198665790 . T . . LowGQX END=198666090 GT ./. chr1 198668642 . T . . LowGQX END=198668885 GT ./. chr1 198671465 . C . . LowGQX END=198671711 GT ./. chr1 198672376 . T . . LowGQX END=198672577 GT ./. chr1 198673550 . G . . LowGQX END=198673684 GT ./. chr1 198675812 . T . . LowGQX END=198676133 GT ./. chr1 198677211 . G . . LowGQX END=198677442 GT ./. chr1 198678765 . T . . LowGQX END=198679005 GT ./. chr1 198682031 . T . . LowGQX END=198682253 GT ./. chr1 198685760 . G . . LowGQX END=198686021 GT ./. chr1 198687172 . A . . LowGQX END=198687483 GT ./. chr1 198691494 . T . . LowGQX END=198691657 GT ./. chr1 198697418 . T . . LowGQX END=198697629 GT ./. chr1 198698215 . G . . LowGQX END=198698353 GT ./. chr1 198700695 . C . . LowGQX END=198700907 GT ./. chr1 198701378 . A . . LowGQX END=198701737 GT ./. chr1 198703273 . T . . LowGQX END=198703606 GT ./. chr1 198704205 . A . . LowGQX END=198704433 GT ./. chr1 198710947 . A . . LowGQX END=198711197 GT ./. chr1 198711310 . T . . LowGQX END=198711548 GT ./. chr1 198713132 . G . . LowGQX END=198713384 GT ./. chr1 198717187 . G . . LowGQX END=198717380 GT ./. chr1 198718494 . A . . LowGQX END=198718730 GT ./. chr1 198719440 . T . . LowGQX END=198719540 GT ./. chr1 198719570 . C . . LowGQX END=198719807 GT ./. chr1 198721327 . T . . LowGQX END=198721552 GT ./. chr1 198721672 . A . . LowGQX END=198721953 GT ./. chr1 198723347 . C . . LowGQX END=198723585 GT ./. chr1 198724984 . A . . LowGQX END=198725362 GT ./. chr1 198828002 . A . . LowGQX END=198828112 GT ./. chr1 198828173 . T . . LowGQX END=198828283 GT ./. chr1 199996958 . C . . LowGQX END=199997058 GT ./. chr1 199998150 . T . . LowGQX END=199998440 GT ./. chr1 200007755 . A . . LowGQX END=200007915 GT ./. chr1 200008753 . C . . LowGQX END=200008964 GT ./. chr1 200012900 . A . . LowGQX END=200013023 GT ./. chr1 200014569 . A . . LowGQX END=200014715 GT ./. chr1 200017298 . A . . LowGQX END=200017949 GT ./. chr1 200026620 . T . . LowGQX END=200026890 GT ./. chr1 200080328 . A . . LowGQX END=200080452 GT ./. chr1 200089934 . A . . LowGQX END=200090123 GT ./. chr1 200143089 . A . . LowGQX END=200143341 GT ./. chr1 200182691 . C . . LowGQX END=200183451 GT ./. chr1 200311793 . G . . LowGQX END=200311893 GT ./. chr1 200312373 . T . . LowGQX END=200312539 GT ./. chr1 200337792 . C . . LowGQX END=200337904 GT ./. chr1 200342196 . A . . LowGQX END=200342296 GT ./. chr1 200376144 . C . . LowGQX END=200378836 GT ./. chr1 200522514 . A . . LowGQX END=200522898 GT ./. chr1 200523554 . A . . LowGQX END=200523737 GT ./. chr1 200524436 . A . . LowGQX END=200524596 GT ./. chr1 200528456 . A . . LowGQX END=200528583 GT ./. chr1 200529848 . A . . LowGQX END=200530011 GT ./. chr1 200534195 . A . . LowGQX END=200534384 GT ./. chr1 200534571 . A . . LowGQX END=200534800 GT ./. chr1 200539037 . A . . LowGQX END=200539137 GT ./. chr1 200544717 . A . . LowGQX END=200544822 GT ./. chr1 200549380 . A . . LowGQX END=200549514 GT ./. chr1 200550326 . C . . LowGQX END=200550426 GT ./. chr1 200555227 . A . . LowGQX END=200555358 GT ./. chr1 200558343 . A . . LowGQX END=200558500 GT ./. chr1 200559251 . A . . LowGQX END=200559403 GT ./. chr1 200561206 . A . . LowGQX END=200561371 GT ./. chr1 200562743 . T . . LowGQX END=200562900 GT ./. chr1 200567343 . T . . LowGQX END=200567552 GT ./. chr1 200569160 . A . . LowGQX END=200569260 GT ./. chr1 200569482 . A . . LowGQX END=200569634 GT ./. chr1 200571022 . A . . LowGQX END=200571199 GT ./. chr1 200572352 . G . . LowGQX END=200572472 GT ./. chr1 200572965 . A . . LowGQX END=200573086 GT ./. chr1 200574409 . A . . LowGQX END=200574521 GT ./. chr1 200574900 . T . . LowGQX END=200575058 GT ./. chr1 200575851 . C . . LowGQX END=200575951 GT ./. chr1 200577956 . A . . LowGQX END=200578059 GT ./. chr1 200583440 . A . . LowGQX END=200583540 GT ./. chr1 200584481 . A . . LowGQX END=200584740 GT ./. chr1 200586738 . A . . LowGQX END=200587854 GT ./. chr1 200594027 . A . . LowGQX END=200594207 GT ./. chr1 200610239 . C . . LowGQX END=200610385 GT ./. chr1 200613380 . A . . LowGQX END=200613648 GT ./. chr1 200617565 . A . . LowGQX END=200617698 GT ./. chr1 200618200 . A . . LowGQX END=200618390 GT ./. chr1 200619551 . A . . LowGQX END=200619807 GT ./. chr1 200628150 . C . . LowGQX END=200628250 GT ./. chr1 200633045 . A . . LowGQX END=200633217 GT ./. chr1 200635063 . A . . LowGQX END=200635871 GT ./. chr1 200708954 . A . . LowGQX END=200709097 GT ./. chr1 200729965 . A . . LowGQX END=200730229 GT ./. chr1 200776502 . A . . LowGQX END=200776668 GT ./. chr1 200784681 . A . . LowGQX END=200784781 GT ./. chr1 200797667 . G . . LowGQX END=200797767 GT ./. chr1 200801326 . A . . LowGQX END=200801472 GT ./. chr1 200801832 . A . . LowGQX END=200801976 GT ./. chr1 200811119 . T . . LowGQX END=200811219 GT ./. chr1 200813904 . T . . LowGQX END=200814058 GT ./. chr1 200816330 . C . . LowGQX END=200816430 GT ./. chr1 200816696 . G . . LowGQX END=200816853 GT ./. chr1 200817158 . A . . LowGQX END=200819365 GT ./. chr1 200821667 . A . . LowGQX END=200821808 GT ./. chr1 200822401 . A . . LowGQX END=200822626 GT ./. chr1 200823932 . C . . LowGQX END=200824032 GT ./. chr1 200825136 . A . . LowGQX END=200825256 GT ./. chr1 200826392 . A . . LowGQX END=200826568 GT ./. chr1 200826880 . A . . LowGQX END=200827190 GT ./. chr1 200842164 . C . . LowGQX END=200843254 GT ./. chr1 200860555 . C . . LowGQX END=200860895 GT ./. chr1 200867433 . A . . LowGQX END=200867586 GT ./. chr1 200868599 . A . . LowGQX END=200868728 GT ./. chr1 200869230 . A . . LowGQX END=200869351 GT ./. chr1 200870063 . A . . LowGQX END=200870290 GT ./. chr1 200876939 . T . . LowGQX END=200877039 GT ./. chr1 200877856 . A . . LowGQX END=200878071 GT ./. chr1 200878350 . A . . LowGQX END=200878528 GT ./. chr1 200880579 . A . . LowGQX END=200881268 GT ./. chr1 200882662 . C . . LowGQX END=200882762 GT ./. chr1 200942568 . A . . LowGQX END=200942788 GT ./. chr1 200943120 . A . . LowGQX END=200943325 GT ./. chr1 200943840 . A . . LowGQX END=200944044 GT ./. chr1 200944625 . A . . LowGQX END=200944800 GT ./. chr1 200945902 . A . . LowGQX END=200946024 GT ./. chr1 200946338 . A . . LowGQX END=200946507 GT ./. chr1 200948661 . A . . LowGQX END=200948846 GT ./. chr1 200950046 . A . . LowGQX END=200950227 GT ./. chr1 200952153 . G . . LowGQX END=200952253 GT ./. chr1 200953985 . A . . LowGQX END=200954145 GT ./. chr1 200955960 . A . . LowGQX END=200956060 GT ./. chr1 200956122 . A . . LowGQX END=200956332 GT ./. chr1 200957403 . C . . LowGQX END=200957503 GT ./. chr1 200957597 . C . . LowGQX END=200957697 GT ./. chr1 200957892 . A . . LowGQX END=200958062 GT ./. chr1 200959068 . A . . LowGQX END=200959174 GT ./. chr1 200959264 . A . . LowGQX END=200959463 GT ./. chr1 200959702 . A . . LowGQX END=200959854 GT ./. chr1 200960043 . A . . LowGQX END=200960280 GT ./. chr1 200960770 . C . . LowGQX END=200960870 GT ./. chr1 200961408 . A . . LowGQX END=200961520 GT ./. chr1 200965322 . A . . LowGQX END=200965526 GT ./. chr1 200967510 . A . . LowGQX END=200967706 GT ./. chr1 200968425 . A . . LowGQX END=200968597 GT ./. chr1 200969002 . G . . LowGQX END=200969102 GT ./. chr1 200969446 . C . . LowGQX END=200969806 GT ./. chr1 200969827 . C . . LowGQX END=200969927 GT ./. chr1 200971287 . A . . LowGQX END=200971481 GT ./. chr1 200972669 . C . . LowGQX END=200972912 GT ./. chr1 200973466 . A . . LowGQX END=200973586 GT ./. chr1 200973669 . C . . LowGQX END=200974064 GT ./. chr1 200974434 . A . . LowGQX END=200974573 GT ./. chr1 200974671 . A . . LowGQX END=200974825 GT ./. chr1 200977895 . A . . LowGQX END=200978082 GT ./. chr1 200978392 . A . . LowGQX END=200978619 GT ./. chr1 200992382 . A . . LowGQX END=200992542 GT ./. chr1 201008908 . C . . LowGQX END=201009262 GT ./. chr1 201009308 . A . . LowGQX END=201009554 GT ./. chr1 201009699 . C . . LowGQX END=201009893 GT ./. chr1 201010581 . G . . LowGQX END=201010769 GT ./. chr1 201012358 . C . . LowGQX END=201012711 GT ./. chr1 201013405 . C . . LowGQX END=201013636 GT ./. chr1 201016192 . A . . LowGQX END=201016419 GT ./. chr1 201016602 . C . . LowGQX END=201016806 GT ./. chr1 201017659 . G . . LowGQX END=201017864 GT ./. chr1 201018080 . C . . LowGQX END=201018279 GT ./. chr1 201019466 . G . . LowGQX END=201019696 GT ./. chr1 201020061 . C . . LowGQX END=201020323 GT ./. chr1 201021634 . A . . LowGQX END=201021828 GT ./. chr1 201022286 . C . . LowGQX END=201022454 GT ./. chr1 201022536 . G . . LowGQX END=201022767 GT ./. chr1 201023582 . A . . LowGQX END=201023741 GT ./. chr1 201027485 . C . . LowGQX END=201027671 GT ./. chr1 201028266 . C . . LowGQX END=201028479 GT ./. chr1 201029735 . A . . LowGQX END=201029996 GT ./. chr1 201030344 . A . . LowGQX END=201030648 GT ./. chr1 201031021 . G . . LowGQX END=201031270 GT ./. chr1 201031539 . A . . LowGQX END=201031694 GT ./. chr1 201034915 . C . . LowGQX END=201035125 GT ./. chr1 201035306 . C . . LowGQX END=201035496 GT ./. chr1 201035964 . C . . LowGQX END=201036173 GT ./. chr1 201038214 . G . . LowGQX END=201038376 GT ./. chr1 201038549 . A . . LowGQX END=201038781 GT ./. chr1 201039349 . A . . LowGQX END=201039584 GT ./. chr1 201041832 . C . . LowGQX END=201042004 GT ./. chr1 201042626 . G . . LowGQX END=201042822 GT ./. chr1 201043583 . C . . LowGQX END=201043800 GT ./. chr1 201044572 . C . . LowGQX END=201044795 GT ./. chr1 201045997 . G . . LowGQX END=201046307 GT ./. chr1 201046956 . C . . LowGQX END=201047284 GT ./. chr1 201052239 . A . . LowGQX END=201052502 GT ./. chr1 201054027 . T . . LowGQX END=201054211 GT ./. chr1 201054513 . G . . LowGQX END=201054761 GT ./. chr1 201056903 . T . . LowGQX END=201057109 GT ./. chr1 201058335 . C . . LowGQX END=201058643 GT ./. chr1 201060717 . C . . LowGQX END=201060972 GT ./. chr1 201061049 . G . . LowGQX END=201061294 GT ./. chr1 201062959 . A . . LowGQX END=201063201 GT ./. chr1 201079241 . A . . LowGQX END=201079449 GT ./. chr1 201081265 . C . . LowGQX END=201081519 GT ./. chr1 201104789 . A . . LowGQX END=201104946 GT ./. chr1 201112946 . A . . LowGQX END=201113082 GT ./. chr1 201115742 . C . . LowGQX END=201115998 GT ./. chr1 201120885 . T . . LowGQX END=201120985 GT ./. chr1 201122871 . A . . LowGQX END=201123054 GT ./. chr1 201162375 . G . . LowGQX END=201162475 GT ./. chr1 201163281 . G . . LowGQX END=201163402 GT ./. chr1 201164966 . G . . LowGQX END=201165107 GT ./. chr1 201166345 . G . . LowGQX END=201166446 GT ./. chr1 201168434 . T . . LowGQX END=201168534 GT ./. chr1 201168710 . G . . LowGQX END=201168810 GT ./. chr1 201169364 . G . . LowGQX END=201169540 GT ./. chr1 201170846 . G . . LowGQX END=201170961 GT ./. chr1 201172865 . G . . LowGQX END=201173035 GT ./. chr1 201174209 . G . . LowGQX END=201174483 GT ./. chr1 201175201 . C . . LowGQX END=201182752 GT ./. chr1 201183303 . A . . LowGQX END=201183432 GT ./. chr1 201184139 . A . . LowGQX END=201184285 GT ./. chr1 201184665 . A . . LowGQX END=201184919 GT ./. chr1 201184920 . G . . LowGQX END=201184969;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 201185053 . G . . LowGQX END=201185116;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 201185117 . C T 11.55 LowGQX;LowGQ DP=1;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;MQ=60;MQ0=0;QD=11.55;SB=-0.01;TI=NM_001164586;GI=IGFN1;FC=Silent GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,1:1:3.01:41,3,0:60:3:1.000 chr1 201185118 . T . . LowGQX END=201185146;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 201185147 . T C 11.01 LowGQX;LowGQ DP=1;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;MQ=60;MQ0=0;QD=11.01;SB=-0.01;TI=NM_001164586;GI=IGFN1;FC=Silent GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,1:1:3.01:41,3,0:60:3:1.000 chr1 201185148 . G . . LowGQX END=201185153;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 201185580 . A . . LowGQX END=201185884 GT ./. chr1 201186413 . A . . LowGQX END=201186591 GT ./. chr1 201187656 . A . . LowGQX END=201187789 GT ./. chr1 201190570 . A . . LowGQX END=201190877 GT ./. chr1 201191862 . T . . LowGQX END=201191962 GT ./. chr1 201193805 . A . . LowGQX END=201194005 GT ./. chr1 201194939 . G . . LowGQX END=201195259 GT ./. chr1 201196008 . A . . LowGQX END=201196339 GT ./. chr1 201197471 . T . . LowGQX END=201197571 GT ./. chr1 201252780 . G . . LowGQX END=201253084 GT ./. chr1 201263019 . T . . LowGQX END=201263225 GT ./. chr1 201282243 . G . . LowGQX END=201282740 GT ./. chr1 201285630 . G . . LowGQX END=201285877 GT ./. chr1 201286649 . G . . LowGQX END=201286959 GT ./. chr1 201287695 . T . . LowGQX END=201287975 GT ./. chr1 201288885 . C . . LowGQX END=201289058 GT ./. chr1 201289344 . G . . LowGQX END=201289561 GT ./. chr1 201291055 . G . . LowGQX END=201291313 GT ./. chr1 201292090 . T . . LowGQX END=201292369 GT ./. chr1 201293505 . T . . LowGQX END=201293761 GT ./. chr1 201294018 . C . . LowGQX END=201294307 GT ./. chr1 201294831 . T . . LowGQX END=201295018 GT ./. chr1 201297837 . C . . LowGQX END=201298016 GT ./. chr1 201328287 . C . . LowGQX END=201328435 GT ./. chr1 201328700 . G . . LowGQX END=201328843 GT ./. chr1 201330356 . C . . LowGQX END=201330549 GT ./. chr1 201330990 . T . . LowGQX END=201331209 GT ./. chr1 201331211 . T . . LowGQX END=201331311 GT ./. chr1 201331469 . C . . LowGQX END=201331569 GT ./. chr1 201332409 . C . . LowGQX END=201332586 GT ./. chr1 201333375 . G . . LowGQX END=201333555 GT ./. chr1 201334268 . A . . LowGQX END=201334487 GT ./. chr1 201334687 . C . . LowGQX END=201334850 GT ./. chr1 201335915 . T . . LowGQX END=201336097 GT ./. chr1 201336848 . G . . LowGQX END=201336986 GT ./. chr1 201337239 . A . . LowGQX END=201337407 GT ./. chr1 201337454 . G . . LowGQX END=201337601 GT ./. chr1 201338426 . A . . LowGQX END=201338526 GT ./. chr1 201338893 . A . . LowGQX END=201339025 GT ./. chr1 201341104 . A . . LowGQX END=201341335 GT ./. chr1 201342167 . A . . LowGQX END=201342267 GT ./. chr1 201342283 . A . . LowGQX END=201342440 GT ./. chr1 201346669 . A . . LowGQX END=201346829 GT ./. chr1 201350909 . G . . LowGQX END=201351069 GT ./. chr1 201351368 . C . . LowGQX END=201351468 GT ./. chr1 201351775 . G . . LowGQX END=201351875 GT ./. chr1 201352200 . A . . LowGQX END=201352342 GT ./. chr1 201352432 . A . . LowGQX END=201352532 GT ./. chr1 201353862 . T . . LowGQX END=201353966 GT ./. chr1 201354827 . A . . LowGQX END=201354936 GT ./. chr1 201355461 . A . . LowGQX END=201356309 GT ./. chr1 201358286 . A . . LowGQX END=201358434 GT ./. chr1 201360206 . C . . LowGQX END=201360310 GT ./. chr1 201368306 . C . . LowGQX END=201368466 GT ./. chr1 201368468 . G . . LowGQX END=201368628 GT ./. chr1 201379454 . C . . LowGQX END=201379566 GT ./. chr1 201380463 . G . . LowGQX END=201380664 GT ./. chr1 201382155 . C . . LowGQX END=201382255 GT ./. chr1 201383644 . A . . LowGQX END=201383780 GT ./. chr1 201384313 . T . . LowGQX END=201384413 GT ./. chr1 201386196 . C . . LowGQX END=201386296 GT ./. chr1 201386805 . G . . LowGQX END=201386965 GT ./. chr1 201437519 . G . . LowGQX END=201437919 GT ./. chr1 201453102 . T . . LowGQX END=201453202 GT ./. chr1 201453830 . T . . LowGQX END=201453930 GT ./. chr1 201454408 . C . . LowGQX END=201454508 GT ./. chr1 201456088 . G . . LowGQX END=201456188 GT ./. chr1 201457981 . A . . LowGQX END=201458115 GT ./. chr1 201459302 . A . . LowGQX END=201459475 GT ./. chr1 201465318 . A . . LowGQX END=201465434 GT ./. chr1 201598524 . T . . LowGQX END=201598684 GT ./. chr1 201617761 . G . . LowGQX END=201618556 GT ./. chr1 201681943 . A . . LowGQX END=201682050 GT ./. chr1 201687516 . A . . LowGQX END=201687886 GT ./. chr1 201709068 . T . . LowGQX END=201709228 GT ./. chr1 201749547 . A . . LowGQX END=201749690 GT ./. chr1 201750138 . A . . LowGQX END=201750440 GT ./. chr1 201751302 . A . . LowGQX END=201752000 GT ./. chr1 201752532 . A . . LowGQX END=201752983 GT ./. chr1 201754409 . T . . LowGQX END=201754509 GT ./. chr1 201755555 . A . . LowGQX END=201755708 GT ./. chr1 201756756 . A . . LowGQX END=201756856 GT ./. chr1 201757574 . C . . LowGQX END=201757769 GT ./. chr1 201758845 . T . . LowGQX END=201758945 GT ./. chr1 201759644 . T . . LowGQX END=201759744 GT ./. chr1 201759806 . T . . LowGQX END=201759906 GT ./. chr1 201762912 . T . . LowGQX END=201763012 GT ./. chr1 201763227 . C . . LowGQX END=201763387 GT ./. chr1 201763592 . A . . LowGQX END=201763786 GT ./. chr1 201772719 . A . . LowGQX END=201772845 GT ./. chr1 201773081 . C . . LowGQX END=201773241 GT ./. chr1 201773571 . T . . LowGQX END=201773671 GT ./. chr1 201777078 . T . . LowGQX END=201777280 GT ./. chr1 201777544 . A . . LowGQX END=201778002 GT ./. chr1 201778290 . A . . LowGQX END=201778392 GT ./. chr1 201778568 . A . . LowGQX END=201778668 GT ./. chr1 201779072 . A . . LowGQX END=201779176 GT ./. chr1 201779177 . C . . LowGQX END=201779182;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 201779183 . A G 9.30 LowGQX BaseQRankSum=0.736;DP=3;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;MQ=60;MQ0=0;MQRankSum=-0.736;QD=3.10;ReadPosRankSum=-0.736;SB=-32.57;TI=NM_020443,NM_001167738;GI=NAV1,NAV1;FC=Missense_E1504G,Missense_E1110G;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1,2:3:31.78:39,0,32:60:9:0.667 chr1 201779184 . G . . LowGQX END=201779236;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:6:60 chr1 201779649 . A . . LowGQX END=201779715;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:6:60 chr1 201779716 . C . . LowGQX END=201779726;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 201779727 . C . . LowGQX END=201779889 GT ./. chr1 201780694 . T . . LowGQX END=201780888 GT ./. chr1 201781017 . C . . LowGQX END=201781117 GT ./. chr1 201781589 . G . . LowGQX END=201781793 GT ./. chr1 201782266 . A . . LowGQX END=201782389 GT ./. chr1 201786214 . A . . LowGQX END=201786416 GT ./. chr1 201788963 . A . . LowGQX END=201789063 GT ./. chr1 201798336 . A . . LowGQX END=201798503 GT ./. chr1 201816388 . A . . LowGQX END=201816488 GT ./. chr1 201816674 . T . . LowGQX END=201816774 GT ./. chr1 201817519 . A . . LowGQX END=201817725 GT ./. chr1 201821227 . T . . LowGQX END=201821327 GT ./. chr1 201822133 . T . . LowGQX END=201822233 GT ./. chr1 201823721 . A . . LowGQX END=201823845 GT ./. chr1 201823949 . A . . LowGQX END=201824054 GT ./. chr1 201824232 . T . . LowGQX END=201824332 GT ./. chr1 201824879 . C . . LowGQX END=201825065 GT ./. chr1 201826222 . A . . LowGQX END=201826325 GT ./. chr1 201827573 . A . . LowGQX END=201827684 GT ./. chr1 201827981 . A . . LowGQX END=201828125 GT ./. chr1 201832574 . A . . LowGQX END=201832738 GT ./. chr1 201835859 . A . . LowGQX END=201836090 GT ./. chr1 201837774 . A . . LowGQX END=201837927 GT ./. chr1 201838716 . A . . LowGQX END=201838849 GT ./. chr1 201839709 . A . . LowGQX END=201839989 GT ./. chr1 201840287 . A . . LowGQX END=201840458 GT ./. chr1 201841954 . A . . LowGQX END=201842092 GT ./. chr1 201843376 . A . . LowGQX END=201843503 GT ./. chr1 201843958 . A . . LowGQX END=201844067 GT ./. chr1 201844269 . A . . LowGQX END=201844369 GT ./. chr1 201845070 . A . . LowGQX END=201845358 GT ./. chr1 201858050 . G . . LowGQX END=201858210 GT ./. chr1 201858571 . A . . LowGQX END=201858747 GT ./. chr1 201859580 . A . . LowGQX END=201859718 GT ./. chr1 201860507 . C . . LowGQX END=201860699 GT ./. chr1 201860902 . C . . LowGQX END=201861002 GT ./. chr1 201865644 . A . . LowGQX END=201865839 GT ./. chr1 201867406 . T . . LowGQX END=201867527 GT ./. chr1 201868364 . A . . LowGQX END=201869880 GT ./. chr1 201915207 . C . . LowGQX END=201915469 GT ./. chr1 201924618 . C . . LowGQX END=201924718 GT ./. chr1 201926407 . A . . LowGQX END=201926511 GT ./. chr1 201926621 . T . . LowGQX END=201926721 GT ./. chr1 201932702 . A . . LowGQX END=201932875 GT ./. chr1 201934559 . A . . LowGQX END=201934674 GT ./. chr1 201938590 . C . . LowGQX END=201938690 GT ./. chr1 201951782 . C . . LowGQX END=201952244 GT ./. chr1 201952568 . T . . LowGQX END=201952668 GT ./. chr1 201958030 . A . . LowGQX END=201958175 GT ./. chr1 201958509 . A . . LowGQX END=201958662 GT ./. chr1 201965273 . A . . LowGQX END=201965394 GT ./. chr1 201966445 . A . . LowGQX END=201966685 GT ./. chr1 201969028 . A . . LowGQX END=201969146 GT ./. chr1 201970502 . A . . LowGQX END=201970672 GT ./. chr1 201970785 . A . . LowGQX END=201970898 GT ./. chr1 201972363 . A . . LowGQX END=201972592 GT ./. chr1 201973480 . A . . LowGQX END=201973627 GT ./. chr1 201974684 . A . . LowGQX END=201974847 GT ./. chr1 201980242 . T . . LowGQX END=201980430 GT ./. chr1 201981083 . A . . LowGQX END=201981309 GT ./. chr1 201981469 . C . . LowGQX END=201981569 GT ./. chr1 201981766 . A . . LowGQX END=201981890 GT ./. chr1 201982070 . C . . LowGQX END=201982170 GT ./. chr1 201982308 . A . . LowGQX END=201982429 GT ./. chr1 201982955 . A . . LowGQX END=201983155 GT ./. chr1 201984335 . A . . LowGQX END=201984454 GT ./. chr1 202092090 . C . . LowGQX END=202092724 GT ./. chr1 202096867 . A . . LowGQX END=202097687 GT ./. chr1 202103570 . G . . LowGQX END=202103670 GT ./. chr1 202104264 . C . . LowGQX END=202104364 GT ./. chr1 202104571 . G . . LowGQX END=202104671 GT ./. chr1 202104832 . G . . LowGQX END=202104932 GT ./. chr1 202107080 . C . . LowGQX END=202107180 GT ./. chr1 202107487 . G . . LowGQX END=202107587 GT ./. chr1 202113576 . A . . LowGQX END=202113746 GT ./. chr1 202117731 . G . . LowGQX END=202117831 GT ./. chr1 202119402 . T . . LowGQX END=202119555 GT ./. chr1 202121666 . G . . LowGQX END=202121830 GT ./. chr1 202122851 . A . . LowGQX END=202122966 GT ./. chr1 202123281 . G . . LowGQX END=202123454 GT ./. chr1 202124650 . A . . LowGQX END=202124750 GT ./. chr1 202126860 . T . . LowGQX END=202126960 GT ./. chr1 202127244 . A . . LowGQX END=202127449 GT ./. chr1 202128407 . A . . LowGQX END=202128650 GT ./. chr1 202129672 . C . . LowGQX END=202129936 GT ./. chr1 202130514 . C . . LowGQX END=202130710 GT ./. chr1 202152730 . G . . LowGQX END=202152830 GT ./. chr1 202155389 . G . . LowGQX END=202155558 GT ./. chr1 202155661 . T . . LowGQX END=202155851 GT ./. chr1 202156102 . T . . LowGQX END=202156202 GT ./. chr1 202156608 . C . . LowGQX END=202156708 GT ./. chr1 202156981 . G . . LowGQX END=202157110 GT ./. chr1 202157974 . G . . LowGQX END=202158121 GT ./. chr1 202158359 . A . . LowGQX END=202158482 GT ./. chr1 202163075 . T . . LowGQX END=202163332 GT ./. chr1 202163654 . T . . LowGQX END=202163807 GT ./. chr1 202166146 . T . . LowGQX END=202166246 GT ./. chr1 202166514 . T . . LowGQX END=202166614 GT ./. chr1 202172926 . A . . LowGQX END=202173026 GT ./. chr1 202183215 . A . . LowGQX END=202183431 GT ./. chr1 202194452 . G . . LowGQX END=202194637 GT ./. chr1 202197050 . T . . LowGQX END=202197150 GT ./. chr1 202205036 . C . . LowGQX END=202205136 GT ./. chr1 202245432 . A . . LowGQX END=202245652 GT ./. chr1 202249836 . A . . LowGQX END=202249995 GT ./. chr1 202266621 . T . . LowGQX END=202266721 GT ./. chr1 202269963 . G . . LowGQX END=202270063 GT ./. chr1 202270278 . C . . LowGQX END=202270378 GT ./. chr1 202272392 . T . . LowGQX END=202272492 GT ./. chr1 202273673 . T . . LowGQX END=202273773 GT ./. chr1 202274795 . C . . LowGQX END=202274895 GT ./. chr1 202275823 . A . . LowGQX END=202275975 GT ./. chr1 202275982 . T . . LowGQX END=202276082 GT ./. chr1 202276444 . C . . LowGQX END=202276544 GT ./. chr1 202278177 . A . . LowGQX END=202278307 GT ./. chr1 202279323 . A . . LowGQX END=202279488 GT ./. chr1 202283921 . T . . LowGQX END=202284021 GT ./. chr1 202287078 . A . . LowGQX END=202288338 GT ./. chr1 202300961 . C . . LowGQX END=202301091 GT ./. chr1 202302130 . C . . LowGQX END=202302230 GT ./. chr1 202302363 . A . . LowGQX END=202302466 GT ./. chr1 202302576 . A . . LowGQX END=202302686 GT ./. chr1 202304102 . C . . LowGQX END=202304202 GT ./. chr1 202304772 . A . . LowGQX END=202304885 GT ./. chr1 202317971 . G . . LowGQX END=202318278 GT ./. chr1 202385913 . A . . LowGQX END=202386048 GT ./. chr1 202391746 . A . . LowGQX END=202391869 GT ./. chr1 202394692 . A . . LowGQX END=202394856 GT ./. chr1 202396166 . A . . LowGQX END=202396356 GT ./. chr1 202397911 . T . . LowGQX END=202398071 GT ./. chr1 202399849 . C . . LowGQX END=202399949 GT ./. chr1 202400606 . A . . LowGQX END=202400750 GT ./. chr1 202403782 . A . . LowGQX END=202403942 GT ./. chr1 202406947 . A . . LowGQX END=202407243 GT ./. chr1 202407338 . A . . LowGQX END=202407438 GT ./. chr1 202409826 . T . . LowGQX END=202409926 GT ./. chr1 202411573 . A . . LowGQX END=202411703 GT ./. chr1 202418115 . A . . LowGQX END=202418302 GT ./. chr1 202443020 . T . . LowGQX END=202443120 GT ./. chr1 202457657 . G . . LowGQX END=202457757 GT ./. chr1 202462240 . A . . LowGQX END=202462448 GT ./. chr1 202464419 . A . . LowGQX END=202464613 GT ./. chr1 202464696 . A . . LowGQX END=202464813 GT ./. chr1 202465880 . T . . LowGQX END=202465980 GT ./. chr1 202509267 . C . . LowGQX END=202509370 GT ./. chr1 202527964 . T . . LowGQX END=202528064 GT ./. chr1 202531710 . T . . LowGQX END=202531810 GT ./. chr1 202531903 . C . . LowGQX END=202532053 GT ./. chr1 202533569 . A . . LowGQX END=202533678 GT ./. chr1 202536883 . T . . LowGQX END=202536983 GT ./. chr1 202538251 . A . . LowGQX END=202538351 GT ./. chr1 202544128 . A . . LowGQX END=202544267 GT ./. chr1 202549596 . C . . LowGQX END=202549696 GT ./. chr1 202565883 . G . . LowGQX END=202566094 GT ./. chr1 202568304 . C . . LowGQX END=202568482 GT ./. chr1 202569483 . A . . LowGQX END=202569605 GT ./. chr1 202571016 . A . . LowGQX END=202571188 GT ./. chr1 202571504 . A . . LowGQX END=202571676 GT ./. chr1 202572125 . A . . LowGQX END=202572249 GT ./. chr1 202573581 . A . . LowGQX END=202573752 GT ./. chr1 202574721 . A . . LowGQX END=202574903 GT ./. chr1 202698162 . T . . LowGQX END=202698304 GT ./. chr1 202698833 . A . . LowGQX END=202699158 GT ./. chr1 202700035 . A . . LowGQX END=202700194 GT ./. chr1 202700902 . A . . LowGQX END=202701114 GT ./. chr1 202702527 . A . . LowGQX END=202703017 GT ./. chr1 202704555 . A . . LowGQX END=202704718 GT ./. chr1 202705339 . A . . LowGQX END=202705523 GT ./. chr1 202709800 . A . . LowGQX END=202709943 GT ./. chr1 202710493 . A . . LowGQX END=202710853 GT ./. chr1 202711517 . A . . LowGQX END=202711636 GT ./. chr1 202711781 . A . . LowGQX END=202711936 GT ./. chr1 202714984 . A . . LowGQX END=202715113 GT ./. chr1 202715268 . A . . LowGQX END=202715454 GT ./. chr1 202718071 . A . . LowGQX END=202718270 GT ./. chr1 202719785 . A . . LowGQX END=202719909 GT ./. chr1 202722031 . A . . LowGQX END=202722198 GT ./. chr1 202724397 . A . . LowGQX END=202724583 GT ./. chr1 202725484 . A . . LowGQX END=202725647 GT ./. chr1 202727517 . A . . LowGQX END=202727641 GT ./. chr1 202729501 . T . . LowGQX END=202729704 GT ./. chr1 202731825 . A . . LowGQX END=202731939 GT ./. chr1 202733125 . T . . LowGQX END=202733276 GT ./. chr1 202735524 . C . . LowGQX END=202735683 GT ./. chr1 202736052 . A . . LowGQX END=202736232 GT ./. chr1 202742244 . A . . LowGQX END=202742419 GT ./. chr1 202743739 . A . . LowGQX END=202743909 GT ./. chr1 202746134 . G . . LowGQX END=202746234 GT ./. chr1 202777228 . A . . LowGQX END=202777436 GT ./. chr1 202777721 . C . . LowGQX END=202777844 GT ./. chr1 202794634 . C . . LowGQX END=202795253 GT ./. chr1 202827234 . G . . LowGQX END=202827334 GT ./. chr1 202828010 . C . . LowGQX END=202828231 GT ./. chr1 202830552 . C . . LowGQX END=202830652 GT ./. chr1 202850104 . A . . LowGQX END=202850354 GT ./. chr1 202858099 . A . . LowGQX END=202858229 GT ./. chr1 202861659 . G . . LowGQX END=202861790 GT ./. chr1 202862365 . A . . LowGQX END=202862556 GT ./. chr1 202863310 . A . . LowGQX END=202863413 GT ./. chr1 202863717 . A . . LowGQX END=202863880 GT ./. chr1 202864648 . A . . LowGQX END=202864848 GT ./. chr1 202865980 . A . . LowGQX END=202866091 GT ./. chr1 202878136 . A . . LowGQX END=202878255 GT ./. chr1 202880180 . A . . LowGQX END=202880334 GT ./. chr1 202887297 . A . . LowGQX END=202887519 GT ./. chr1 202888881 . A . . LowGQX END=202889071 GT ./. chr1 202894094 . A . . LowGQX END=202894336 GT ./. chr1 202897593 . A . . LowGQX END=202897693 GT ./. chr1 202910699 . G . . LowGQX END=202910832 GT ./. chr1 202911151 . A . . LowGQX END=202911349 GT ./. chr1 202912884 . A . . LowGQX END=202913076 GT ./. chr1 202914109 . A . . LowGQX END=202914300 GT ./. chr1 202915565 . A . . LowGQX END=202915741 GT ./. chr1 202917430 . A . . LowGQX END=202917609 GT ./. chr1 202920056 . A . . LowGQX END=202920201 GT ./. chr1 202931653 . G . . LowGQX END=202931883 GT ./. chr1 202932057 . C . . LowGQX END=202932296 GT ./. chr1 202932763 . A . . LowGQX END=202932863 GT ./. chr1 202933732 . T . . LowGQX END=202933832 GT ./. chr1 202934497 . A . . LowGQX END=202934631 GT ./. chr1 202935013 . A . . LowGQX END=202935124 GT ./. chr1 202935643 . A . . LowGQX END=202935743 GT ./. chr1 202935875 . A . . LowGQX END=202936029 GT ./. chr1 202936277 . G . . LowGQX END=202936377 GT ./. chr1 202955733 . T . . LowGQX END=202956471 GT ./. chr1 202976592 . A . . LowGQX END=202976705 GT ./. chr1 202976897 . T . . LowGQX END=202976997 GT ./. chr1 202977769 . A . . LowGQX END=202977941 GT ./. chr1 202984015 . A . . LowGQX END=202984179 GT ./. chr1 202985086 . A . . LowGQX END=202985353 GT ./. chr1 202987600 . T . . LowGQX END=202987700 GT ./. chr1 202989919 . A . . LowGQX END=202990079 GT ./. chr1 202991981 . A . . LowGQX END=202992171 GT ./. chr1 203003561 . C . . LowGQX END=203003718 GT ./. chr1 203003760 . T . . LowGQX END=203003920 GT ./. chr1 203004359 . G . . LowGQX END=203004459 GT ./. chr1 203004678 . G . . LowGQX END=203004778 GT ./. chr1 203006267 . T . . LowGQX END=203006345;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 203006346 . C . . LowGQX . GT ./. chr1 203006347 . C . . LowGQX END=203006367;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 203008075 . G . . LowGQX END=203008371 GT ./. chr1 203012524 . G . . LowGQX END=203012627 GT ./. chr1 203013058 . G . . LowGQX END=203013224 GT ./. chr1 203013494 . T . . LowGQX END=203013594 GT ./. chr1 203013819 . T . . LowGQX END=203013972 GT ./. chr1 203014495 . G . . LowGQX END=203014688 GT ./. chr1 203014968 . G . . LowGQX END=203015116 GT ./. chr1 203015375 . G . . LowGQX END=203015511 GT ./. chr1 203017347 . G . . LowGQX END=203017447 GT ./. chr1 203017698 . G . . LowGQX END=203017843 GT ./. chr1 203018027 . C . . LowGQX END=203018127 GT ./. chr1 203018800 . A . . LowGQX END=203018900 GT ./. chr1 203020896 . G . . LowGQX END=203021006 GT ./. chr1 203022880 . G . . LowGQX END=203023090 GT ./. chr1 203023169 . T . . LowGQX END=203023269 GT ./. chr1 203024559 . G . . LowGQX END=203024801 GT ./. chr1 203025216 . A . . LowGQX END=203025316 GT ./. chr1 203025502 . G . . LowGQX END=203025637 GT ./. chr1 203025911 . G . . LowGQX END=203026079 GT ./. chr1 203028303 . T . . LowGQX END=203028403 GT ./. chr1 203028889 . T . . LowGQX END=203028989 GT ./. chr1 203029344 . G . . LowGQX END=203029546 GT ./. chr1 203030079 . G . . LowGQX END=203030179 GT ./. chr1 203030743 . C . . LowGQX END=203030843 GT ./. chr1 203032915 . C . . LowGQX END=203033132 GT ./. chr1 203036822 . G . . LowGQX END=203036922 GT ./. chr1 203037560 . T . . LowGQX END=203037757 GT ./. chr1 203040804 . G . . LowGQX END=203040904 GT ./. chr1 203044693 . C . . LowGQX END=203044894 GT ./. chr1 203045444 . A . . LowGQX END=203045544 GT ./. chr1 203053036 . T . . LowGQX END=203053162 GT ./. chr1 203053766 . C . . LowGQX END=203053866 GT ./. chr1 203054617 . A . . LowGQX END=203055092 GT ./. chr1 203097443 . A . . LowGQX END=203097561 GT ./. chr1 203097968 . C . . LowGQX END=203098313 GT ./. chr1 203119790 . A . . LowGQX END=203119907 GT ./. chr1 203134152 . T . . LowGQX END=203135031 GT ./. chr1 203137686 . G . . LowGQX END=203137846 GT ./. chr1 203138032 . A . . LowGQX END=203138223 GT ./. chr1 203138379 . A . . LowGQX END=203138568 GT ./. chr1 203139417 . A . . LowGQX END=203139581 GT ./. chr1 203140187 . A . . LowGQX END=203140331 GT ./. chr1 203140509 . A . . LowGQX END=203140709 GT ./. chr1 203141008 . C . . LowGQX END=203141227 GT ./. chr1 203143556 . A . . LowGQX END=203143728 GT ./. chr1 203144453 . A . . LowGQX END=203144592 GT ./. chr1 203144677 . A . . LowGQX END=203144886 GT ./. chr1 203148571 . G . . LowGQX END=203149008 GT ./. chr1 203149596 . A . . LowGQX END=203149796 GT ./. chr1 203150288 . A . . LowGQX END=203150416 GT ./. chr1 203151857 . A . . LowGQX END=203151983 GT ./. chr1 203152767 . A . . LowGQX END=203152922 GT ./. chr1 203153683 . C . . LowGQX END=203153783 GT ./. chr1 203154310 . A . . LowGQX END=203154516 GT ./. chr1 203155409 . C . . LowGQX END=203155509 GT ./. chr1 203155690 . A . . LowGQX END=203155790 GT ./. chr1 203174930 . A . . LowGQX END=203175030 GT ./. chr1 203185206 . G . . LowGQX END=203186313 GT ./. chr1 203186429 . C . . LowGQX END=203186549 GT ./. chr1 203186816 . G . . LowGQX END=203187045 GT ./. chr1 203187062 . C . . LowGQX END=203187243 GT ./. chr1 203188293 . A . . LowGQX END=203188509 GT ./. chr1 203188741 . C . . LowGQX END=203189029 GT ./. chr1 203191279 . C . . LowGQX END=203191505 GT ./. chr1 203192212 . G . . LowGQX END=203192439 GT ./. chr1 203192572 . C . . LowGQX END=203192840 GT ./. chr1 203194125 . C . . LowGQX END=203194284 GT ./. chr1 203194746 . A . . LowGQX END=203195050 GT ./. chr1 203197610 . T . . LowGQX END=203197742 GT ./. chr1 203198689 . T . . LowGQX END=203198861 GT ./. chr1 203274733 . A . . LowGQX END=203274913 GT ./. chr1 203276230 . A . . LowGQX END=203276569 GT ./. chr1 203311469 . G . . LowGQX END=203311625 GT ./. chr1 203316418 . A . . LowGQX END=203317401 GT ./. chr1 203452311 . T . . LowGQX END=203453288 GT ./. chr1 203455832 . A . . LowGQX END=203456012 GT ./. chr1 203465083 . C . . LowGQX END=203465416 GT ./. chr1 203466054 . T . . LowGQX END=203466295 GT ./. chr1 203467758 . G . . LowGQX END=203468019 GT ./. chr1 203468726 . A . . LowGQX END=203469031 GT ./. chr1 203471991 . C . . LowGQX END=203472189 GT ./. chr1 203472627 . T . . LowGQX END=203472900 GT ./. chr1 203652332 . A . . LowGQX END=203652529 GT ./. chr1 203667283 . A . . LowGQX END=203667485 GT ./. chr1 203668586 . A . . LowGQX END=203668848 GT ./. chr1 203669332 . A . . LowGQX END=203669462 GT ./. chr1 203669924 . A . . LowGQX END=203670054 GT ./. chr1 203671140 . C . . LowGQX END=203671240 GT ./. chr1 203672778 . A . . LowGQX END=203672944 GT ./. chr1 203676135 . A . . LowGQX END=203676354 GT ./. chr1 203676988 . A . . LowGQX END=203677235 GT ./. chr1 203678427 . A . . LowGQX END=203678673 GT ./. chr1 203680003 . A . . LowGQX END=203680239 GT ./. chr1 203681086 . A . . LowGQX END=203681270 GT ./. chr1 203682287 . T . . LowGQX END=203682387 GT ./. chr1 203683297 . A . . LowGQX END=203683408 GT ./. chr1 203689675 . A . . LowGQX END=203689871 GT ./. chr1 203690323 . A . . LowGQX END=203690541 GT ./. chr1 203691604 . A . . LowGQX END=203691820 GT ./. chr1 203693007 . A . . LowGQX END=203693119 GT ./. chr1 203696521 . A . . LowGQX END=203696702 GT ./. chr1 203697270 . A . . LowGQX END=203697370 GT ./. chr1 203698709 . G . . LowGQX END=203698834 GT ./. chr1 203702349 . A . . LowGQX END=203702537 GT ./. chr1 203708672 . A . . LowGQX END=203708985 GT ./. chr1 203734441 . A . . LowGQX END=203734541 GT ./. chr1 203734689 . A . . LowGQX END=203734789 GT ./. chr1 203739954 . A . . LowGQX END=203740068 GT ./. chr1 203740493 . A . . LowGQX END=203740608 GT ./. chr1 203741186 . G . . LowGQX END=203741286 GT ./. chr1 203743001 . A . . LowGQX END=203743812 GT ./. chr1 203766650 . A . . LowGQX END=203769591 GT ./. chr1 203786176 . T . . LowGQX END=203786276 GT ./. chr1 203787696 . A . . LowGQX END=203787820 GT ./. chr1 203797425 . A . . LowGQX END=203797553 GT ./. chr1 203798577 . A . . LowGQX END=203798785 GT ./. chr1 203798906 . A . . LowGQX END=203799027 GT ./. chr1 203799189 . C . . LowGQX END=203799342 GT ./. chr1 203800787 . A . . LowGQX END=203800902 GT ./. chr1 203802901 . C . . LowGQX END=203803001 GT ./. chr1 203807092 . A . . LowGQX END=203807195 GT ./. chr1 203809419 . T . . LowGQX END=203809519 GT ./. chr1 203816310 . A . . LowGQX END=203816818 GT ./. chr1 203817448 . T . . LowGQX END=203817548 GT ./. chr1 203818837 . A . . LowGQX END=203819157 GT ./. chr1 203819582 . T . . LowGQX END=203819812 GT ./. chr1 203820169 . A . . LowGQX END=203820269 GT ./. chr1 203821267 . A . . LowGQX END=203821530 GT ./. chr1 203830765 . T . . LowGQX END=203830865 GT ./. chr1 203831288 . T . . LowGQX END=203831388 GT ./. chr1 203832773 . C . . LowGQX END=203832873 GT ./. chr1 203834159 . A . . LowGQX END=203834259 GT ./. chr1 203838983 . T . . LowGQX END=203839083 GT ./. chr1 204006156 . C . . LowGQX END=204006256 GT ./. chr1 204006529 . T . . LowGQX END=204006768 GT ./. chr1 204009393 . C . . LowGQX END=204009523 GT ./. chr1 204010192 . C . . LowGQX END=204010292 GT ./. chr1 204082043 . G . . LowGQX END=204082263 GT ./. chr1 204083448 . G . . LowGQX END=204083561 GT ./. chr1 204083640 . C . . LowGQX END=204083740 GT ./. chr1 204085419 . T . . LowGQX END=204085519 GT ./. chr1 204085634 . G . . LowGQX END=204085808 GT ./. chr1 204086234 . T . . LowGQX END=204086334 GT ./. chr1 204086720 . G . . LowGQX END=204086883 GT ./. chr1 204090962 . C . . LowGQX END=204091121 GT ./. chr1 204091364 . G . . LowGQX END=204091554 GT ./. chr1 204091981 . G . . LowGQX END=204092092 GT ./. chr1 204092238 . A . . LowGQX END=204092338 GT ./. chr1 204092788 . G . . LowGQX END=204092933 GT ./. chr1 204093768 . G . . LowGQX END=204093986 GT ./. chr1 204094985 . G . . LowGQX END=204095263 GT ./. chr1 204101298 . G . . LowGQX END=204101398 GT ./. chr1 204103622 . C . . LowGQX END=204103823 GT ./. chr1 204106231 . C . . LowGQX END=204106378 GT ./. chr1 204109155 . C . . LowGQX END=204109255 GT ./. chr1 204110330 . A . . LowGQX END=204110430 GT ./. chr1 204110442 . C . . LowGQX END=204110586 GT ./. chr1 204115769 . C . . LowGQX END=204115893 GT ./. chr1 204115995 . C . . LowGQX END=204116095 GT ./. chr1 204116536 . T . . LowGQX END=204116704 GT ./. chr1 204118830 . C . . LowGQX END=204119091 GT ./. chr1 204120652 . G . . LowGQX END=204121042 GT ./. chr1 204124093 . C . . LowGQX END=204124357 GT ./. chr1 204124897 . T . . LowGQX END=204125098 GT ./. chr1 204125255 . A . . LowGQX END=204125499 GT ./. chr1 204125754 . C . . LowGQX END=204125976 GT ./. chr1 204126438 . G . . LowGQX END=204126563 GT ./. chr1 204128422 . C . . LowGQX END=204128775 GT ./. chr1 204129637 . C . . LowGQX END=204129858 GT ./. chr1 204130369 . C . . LowGQX END=204130595 GT ./. chr1 204131090 . C . . LowGQX END=204131343 GT ./. chr1 204135273 . G . . LowGQX END=204135473 GT ./. chr1 204159501 . G . . LowGQX END=204159977 GT ./. chr1 204161851 . T . . LowGQX END=204162056 GT ./. chr1 204167504 . C . . LowGQX END=204167656 GT ./. chr1 204168300 . G . . LowGQX END=204168400 GT ./. chr1 204170759 . A . . LowGQX END=204170942 GT ./. chr1 204172020 . T . . LowGQX END=204172120 GT ./. chr1 204182973 . C . . LowGQX END=204183073 GT ./. chr1 204192555 . C . . LowGQX END=204192716 GT ./. chr1 204197169 . T . . LowGQX END=204197359 GT ./. chr1 204197854 . A . . LowGQX END=204197992 GT ./. chr1 204198063 . A . . LowGQX END=204198235 GT ./. chr1 204199539 . A . . LowGQX END=204199717 GT ./. chr1 204210447 . A . . LowGQX END=204210612 GT ./. chr1 204210811 . A . . LowGQX END=204211000 GT ./. chr1 204213959 . C . . LowGQX END=204214170 GT ./. chr1 204214741 . A . . LowGQX END=204214857 GT ./. chr1 204216491 . A . . LowGQX END=204216591 GT ./. chr1 204217947 . A . . LowGQX END=204218101 GT ./. chr1 204218303 . G . . LowGQX END=204218403 GT ./. chr1 204219659 . G . . LowGQX END=204219759 GT ./. chr1 204220649 . G . . LowGQX END=204220749 GT ./. chr1 204224731 . A . . LowGQX END=204224831 GT ./. chr1 204225923 . G . . LowGQX END=204226023 GT ./. chr1 204226479 . A . . LowGQX END=204227000 GT ./. chr1 204228384 . A . . LowGQX END=204228871 GT ./. chr1 204230392 . T . . LowGQX END=204230637 GT ./. chr1 204234068 . A . . LowGQX END=204234173 GT ./. chr1 204236530 . G . . LowGQX END=204236690 GT ./. chr1 204237334 . A . . LowGQX END=204237443 GT ./. chr1 204242752 . A . . LowGQX END=204242858 GT ./. chr1 204375218 . A . . LowGQX END=204375444 GT ./. chr1 204378618 . A . . LowGQX END=204380542 GT ./. chr1 204393771 . C . . LowGQX END=204393871 GT ./. chr1 204393978 . G . . LowGQX END=204394171 GT ./. chr1 204394739 . A . . LowGQX END=204394872 GT ./. chr1 204396774 . A . . LowGQX END=204396885 GT ./. chr1 204397258 . A . . LowGQX END=204397358 GT ./. chr1 204397994 . G . . LowGQX END=204398094 GT ./. chr1 204399047 . A . . LowGQX END=204399169 GT ./. chr1 204400795 . A . . LowGQX END=204400924 GT ./. chr1 204401326 . A . . LowGQX END=204401532 GT ./. chr1 204402442 . A . . LowGQX END=204402556 GT ./. chr1 204402919 . A . . LowGQX END=204403080 GT ./. chr1 204403545 . C . . LowGQX END=204403739 GT ./. chr1 204408061 . A . . LowGQX END=204408202 GT ./. chr1 204409287 . C . . LowGQX END=204409452 GT ./. chr1 204410596 . C . . LowGQX END=204410696 GT ./. chr1 204411652 . A . . LowGQX END=204411764 GT ./. chr1 204412543 . A . . LowGQX END=204412728 GT ./. chr1 204413194 . A . . LowGQX END=204413294 GT ./. chr1 204413456 . C . . LowGQX END=204413556 GT ./. chr1 204415082 . A . . LowGQX END=204415275 GT ./. chr1 204416562 . A . . LowGQX END=204416709 GT ./. chr1 204418311 . A . . LowGQX END=204418427 GT ./. chr1 204418976 . A . . LowGQX END=204419148 GT ./. chr1 204423793 . T . . LowGQX END=204423922 GT ./. chr1 204424982 . A . . LowGQX END=204425182 GT ./. chr1 204426132 . C . . LowGQX END=204426232 GT ./. chr1 204426854 . A . . LowGQX END=204427034 GT ./. chr1 204428988 . C . . LowGQX END=204429088 GT ./. chr1 204429442 . C . . LowGQX END=204429542 GT ./. chr1 204429676 . A . . LowGQX END=204429792 GT ./. chr1 204433138 . A . . LowGQX END=204433263 GT ./. chr1 204433576 . A . . LowGQX END=204433735 GT ./. chr1 204434345 . A . . LowGQX END=204434450 GT ./. chr1 204435898 . C . . LowGQX END=204436166 GT ./. chr1 204437996 . A . . LowGQX END=204438933 GT ./. chr1 204494636 . T . . LowGQX END=204494736 GT ./. chr1 204495476 . T . . LowGQX END=204495576 GT ./. chr1 204499810 . A . . LowGQX END=204499948 GT ./. chr1 204501297 . T . . LowGQX END=204501397 GT ./. chr1 204501872 . T . . LowGQX END=204501972 GT ./. chr1 204505997 . A . . LowGQX END=204506097 GT ./. chr1 204506542 . T . . LowGQX END=204506642 GT ./. chr1 204507031 . T . . LowGQX END=204507131 GT ./. chr1 204507335 . A . . LowGQX END=204507439 GT ./. chr1 204511910 . A . . LowGQX END=204512075 GT ./. chr1 204513661 . A . . LowGQX END=204513815 GT ./. chr1 204515916 . C . . LowGQX END=204516016 GT ./. chr1 204518239 . A . . LowGQX END=204518813 GT ./. chr1 204527739 . C . . LowGQX END=204527839 GT ./. chr1 204586973 . T . . LowGQX END=204589125 GT ./. chr1 204840139 . C . . LowGQX END=204840239 GT ./. chr1 204889760 . G . . LowGQX END=204889869 GT ./. chr1 204913294 . T . . LowGQX END=204913537 GT ./. chr1 204915399 . G . . LowGQX END=204915499 GT ./. chr1 204915795 . A . . LowGQX END=204915895 GT ./. chr1 204917733 . A . . LowGQX END=204917833 GT ./. chr1 204919644 . T . . LowGQX END=204919744 GT ./. chr1 204921135 . G . . LowGQX END=204921247 GT ./. chr1 204923303 . C . . LowGQX END=204923523 GT ./. chr1 204923955 . A . . LowGQX END=204924082 GT ./. chr1 204926782 . A . . LowGQX END=204926957 GT ./. chr1 204931212 . C . . LowGQX END=204931312 GT ./. chr1 204937375 . A . . LowGQX END=204937491 GT ./. chr1 204937924 . A . . LowGQX END=204938113 GT ./. chr1 204939742 . A . . LowGQX END=204939878 GT ./. chr1 204942402 . A . . LowGQX END=204942550 GT ./. chr1 204943305 . A . . LowGQX END=204943423 GT ./. chr1 204943696 . C . . LowGQX END=204943954 GT ./. chr1 204944397 . A . . LowGQX END=204944549 GT ./. chr1 204945797 . A . . LowGQX END=204945953 GT ./. chr1 204946781 . A . . LowGQX END=204946881 GT ./. chr1 204948094 . A . . LowGQX END=204948200 GT ./. chr1 204948488 . A . . LowGQX END=204948690 GT ./. chr1 204949426 . C . . LowGQX END=204949584 GT ./. chr1 204950924 . A . . LowGQX END=204951151 GT ./. chr1 204953153 . A . . LowGQX END=204953273 GT ./. chr1 204955036 . A . . LowGQX END=204955245 GT ./. chr1 204956544 . A . . LowGQX END=204956671 GT ./. chr1 204957759 . A . . LowGQX END=204957979 GT ./. chr1 204960377 . C . . LowGQX END=204960477 GT ./. chr1 204962844 . C . . LowGQX END=204962944 GT ./. chr1 204966297 . G . . LowGQX END=204966708 GT ./. chr1 204970246 . T . . LowGQX END=204970415 GT ./. chr1 204971723 . G . . LowGQX END=204971877 GT ./. chr1 204978479 . C . . LowGQX END=204978579 GT ./. chr1 204978683 . A . . LowGQX END=204978819 GT ./. chr1 204981877 . A . . LowGQX END=204981997 GT ./. chr1 204985434 . A . . LowGQX END=204985816 GT ./. chr1 205022299 . G . . LowGQX END=205022399 GT ./. chr1 205027047 . A . . LowGQX END=205027196 GT ./. chr1 205027287 . C . . LowGQX END=205027487 GT ./. chr1 205027632 . A . . LowGQX END=205027794 GT ./. chr1 205028210 . A . . LowGQX END=205028424 GT ./. chr1 205028709 . A . . LowGQX END=205028813 GT ./. chr1 205030371 . A . . LowGQX END=205030551 GT ./. chr1 205030991 . A . . LowGQX END=205031238 GT ./. chr1 205031566 . A . . LowGQX END=205031700 GT ./. chr1 205033448 . A . . LowGQX END=205033603 GT ./. chr1 205033749 . A . . LowGQX END=205033881 GT ./. chr1 205034213 . A . . LowGQX END=205034393 GT ./. chr1 205034874 . G . . LowGQX END=205035040 GT ./. chr1 205035567 . A . . LowGQX END=205035730 GT ./. chr1 205036227 . A . . LowGQX END=205036381 GT ./. chr1 205038605 . T . . LowGQX END=205038705 GT ./. chr1 205038953 . A . . LowGQX END=205039192 GT ./. chr1 205039552 . A . . LowGQX END=205039669 GT ./. chr1 205041073 . A . . LowGQX END=205041264 GT ./. chr1 205041609 . A . . LowGQX END=205041769 GT ./. chr1 205042194 . A . . LowGQX END=205042367 GT ./. chr1 205042782 . A . . LowGQX END=205042896 GT ./. chr1 205047680 . A . . LowGQX END=205047840 GT ./. chr1 205052679 . T . . LowGQX END=205053451 GT ./. chr1 205057820 . T . . LowGQX END=205057980 GT ./. chr1 205063999 . A . . LowGQX END=205064195 GT ./. chr1 205065808 . A . . LowGQX END=205066042 GT ./. chr1 205066439 . T . . LowGQX END=205066539 GT ./. chr1 205068115 . A . . LowGQX END=205068237 GT ./. chr1 205068855 . A . . LowGQX END=205068955 GT ./. chr1 205069037 . A . . LowGQX END=205069195 GT ./. chr1 205069278 . A . . LowGQX END=205069402 GT ./. chr1 205070726 . A . . LowGQX END=205070840 GT ./. chr1 205072983 . A . . LowGQX END=205073150 GT ./. chr1 205074154 . A . . LowGQX END=205074299 GT ./. chr1 205083915 . A . . LowGQX END=205084115 GT ./. chr1 205084984 . A . . LowGQX END=205085136 GT ./. chr1 205085349 . C . . LowGQX END=205085509 GT ./. chr1 205090943 . A . . LowGQX END=205091043 GT ./. chr1 205116684 . T . . LowGQX END=205116876 GT ./. chr1 205117331 . A . . LowGQX END=205117470 GT ./. chr1 205119806 . A . . LowGQX END=205119976 GT ./. chr1 205126399 . A . . LowGQX END=205126517 GT ./. chr1 205128673 . A . . LowGQX END=205128810 GT ./. chr1 205129190 . C . . LowGQX END=205129401 GT ./. chr1 205130384 . A . . LowGQX END=205130518 GT ./. chr1 205131162 . A . . LowGQX END=205131343 GT ./. chr1 205132043 . A . . LowGQX END=205132143 GT ./. chr1 205132849 . A . . LowGQX END=205133086 GT ./. chr1 205138289 . A . . LowGQX END=205138963 GT ./. chr1 205156544 . A . . LowGQX END=205156937 GT ./. chr1 205180397 . A . . LowGQX END=205180666 GT ./. chr1 205197691 . C . . LowGQX END=205197902 GT ./. chr1 205210631 . A . . LowGQX END=205211175 GT ./. chr1 205215734 . A . . LowGQX END=205215834 GT ./. chr1 205225452 . C . . LowGQX END=205225552 GT ./. chr1 205238030 . A . . LowGQX END=205239015 GT ./. chr1 205240246 . A . . LowGQX END=205240474 GT ./. chr1 205240939 . A . . LowGQX END=205241255 GT ./. chr1 205272576 . A . . LowGQX END=205273644 GT ./. chr1 205274325 . A . . LowGQX END=205274462 GT ./. chr1 205275314 . A . . LowGQX END=205275438 GT ./. chr1 205277209 . A . . LowGQX END=205277365 GT ./. chr1 205277707 . A . . LowGQX END=205277863 GT ./. chr1 205280831 . A . . LowGQX END=205280956 GT ./. chr1 205290524 . A . . LowGQX END=205290759 GT ./. chr1 205306515 . G . . LowGQX END=205306723 GT ./. chr1 205307621 . A . . LowGQX END=205307727 GT ./. chr1 205308320 . A . . LowGQX END=205308540 GT ./. chr1 205308770 . A . . LowGQX END=205308939 GT ./. chr1 205312355 . G . . LowGQX END=205312591 GT ./. chr1 205312592 . G . . LowGQX END=205312649;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 205312650 . T . . LowGQX . GT ./. chr1 205312651 . C . . LowGQX END=205312735;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 205325629 . A . . LowGQX END=205325729 GT ./. chr1 205350785 . C . . LowGQX END=205350987 GT ./. chr1 205353404 . A . . LowGQX END=205353504 GT ./. chr1 205385342 . C . . LowGQX END=205385442 GT ./. chr1 205388356 . A . . LowGQX END=205388483 GT ./. chr1 205389574 . T . . LowGQX END=205389674 GT ./. chr1 205417429 . A . . LowGQX END=205417580 GT ./. chr1 205492294 . T . . LowGQX END=205492846 GT ./. chr1 205493358 . A . . LowGQX END=205493488 GT ./. chr1 205494246 . T . . LowGQX END=205494346 GT ./. chr1 205495191 . A . . LowGQX END=205495310 GT ./. chr1 205495493 . A . . LowGQX END=205495593 GT ./. chr1 205495861 . G . . LowGQX END=205495968 GT ./. chr1 205496920 . A . . LowGQX END=205497048 GT ./. chr1 205497174 . A . . LowGQX END=205497299 GT ./. chr1 205498125 . A . . LowGQX END=205498227 GT ./. chr1 205498450 . A . . LowGQX END=205498562 GT ./. chr1 205498647 . A . . LowGQX END=205498902 GT ./. chr1 205499383 . T . . LowGQX END=205499483 GT ./. chr1 205499745 . C . . LowGQX END=205499845 GT ./. chr1 205500440 . C . . LowGQX END=205500540 GT ./. chr1 205538126 . C . . LowGQX END=205538496 GT ./. chr1 205548814 . A . . LowGQX END=205549080 GT ./. chr1 205549787 . A . . LowGQX END=205550052 GT ./. chr1 205553081 . A . . LowGQX END=205553254 GT ./. chr1 205554002 . A . . LowGQX END=205554122 GT ./. chr1 205555160 . A . . LowGQX END=205555370 GT ./. chr1 205561266 . A . . LowGQX END=205561418 GT ./. chr1 205566894 . T . . LowGQX END=205566994 GT ./. chr1 205568257 . A . . LowGQX END=205568382 GT ./. chr1 205569512 . C . . LowGQX END=205569612 GT ./. chr1 205585672 . G . . LowGQX END=205585775 GT ./. chr1 205588033 . T . . LowGQX END=205588204 GT ./. chr1 205588954 . T . . LowGQX END=205589969 GT ./. chr1 205592802 . A . . LowGQX END=205593020 GT ./. chr1 205600748 . C . . LowGQX END=205601028 GT ./. chr1 205615842 . A . . LowGQX END=205615942 GT ./. chr1 205628360 . T . . LowGQX END=205628802 GT ./. chr1 205630987 . A . . LowGQX END=205631257 GT ./. chr1 205631959 . A . . LowGQX END=205632749 GT ./. chr1 205633611 . A . . LowGQX END=205633787 GT ./. chr1 205687406 . T . . LowGQX END=205687610 GT ./. chr1 205688653 . A . . LowGQX END=205688807 GT ./. chr1 205689627 . A . . LowGQX END=205689784 GT ./. chr1 205693032 . T . . LowGQX END=205693205 GT ./. chr1 205696771 . G . . LowGQX END=205696936 GT ./. chr1 205698618 . C . . LowGQX END=205698775 GT ./. chr1 205719001 . A . . LowGQX END=205719161 GT ./. chr1 205739419 . A . . LowGQX END=205739633 GT ./. chr1 205739810 . C . . LowGQX END=205740034 GT ./. chr1 205740549 . T . . LowGQX END=205740833 GT ./. chr1 205741573 . T . . LowGQX END=205741747 GT ./. chr1 205743910 . G . . LowGQX END=205744136 GT ./. chr1 205760610 . A . . LowGQX END=205760898 GT ./. chr1 205763947 . C . . LowGQX END=205764198 GT ./. chr1 205764421 . G . . LowGQX END=205764658 GT ./. chr1 205766001 . C . . LowGQX END=205766183 GT ./. chr1 205766981 . T . . LowGQX END=205767231 GT ./. chr1 205767746 . C . . LowGQX END=205767995 GT ./. chr1 205768034 . A . . LowGQX END=205768281 GT ./. chr1 205768836 . T . . LowGQX END=205769010 GT ./. chr1 205770030 . T . . LowGQX END=205770240 GT ./. chr1 205779147 . G . . LowGQX END=205779621 GT ./. chr1 205797746 . C . . LowGQX END=205797874 GT ./. chr1 205799406 . A . . LowGQX END=205799510 GT ./. chr1 205801704 . C . . LowGQX END=205801897 GT ./. chr1 205809366 . C . . LowGQX END=205809466 GT ./. chr1 205810929 . G . . LowGQX END=205811029 GT ./. chr1 205811263 . A . . LowGQX END=205811363 GT ./. chr1 205811792 . T . . LowGQX END=205811892 GT ./. chr1 205812793 . A . . LowGQX END=205812917 GT ./. chr1 205813213 . A . . LowGQX END=205813348 GT ./. chr1 205813933 . C . . LowGQX END=205814033 GT ./. chr1 205814451 . A . . LowGQX END=205814688 GT ./. chr1 205816940 . A . . LowGQX END=205817161 GT ./. chr1 205819030 . A . . LowGQX END=205819203 GT ./. chr1 205884018 . C . . LowGQX END=205884425 GT ./. chr1 205884459 . A . . LowGQX END=205884559 GT ./. chr1 205886397 . T . . LowGQX END=205886497 GT ./. chr1 205887966 . A . . LowGQX END=205888116 GT ./. chr1 205889282 . C . . LowGQX END=205889382 GT ./. chr1 205890692 . A . . LowGQX END=205890978 GT ./. chr1 205892208 . A . . LowGQX END=205892326 GT ./. chr1 205892460 . T . . LowGQX END=205892560 GT ./. chr1 205892657 . G . . LowGQX END=205892757 GT ./. chr1 205893509 . A . . LowGQX END=205893620 GT ./. chr1 205895661 . A . . LowGQX END=205895761 GT ./. chr1 205896328 . T . . LowGQX END=205896428 GT ./. chr1 205896618 . A . . LowGQX END=205896736 GT ./. chr1 205897028 . A . . LowGQX END=205897180 GT ./. chr1 205897947 . G . . LowGQX END=205898047 GT ./. chr1 205898330 . A . . LowGQX END=205898487 GT ./. chr1 205899018 . A . . LowGQX END=205899187 GT ./. chr1 205900986 . A . . LowGQX END=205901166 GT ./. chr1 205901828 . A . . LowGQX END=205901943 GT ./. chr1 205902071 . A . . LowGQX END=205902215 GT ./. chr1 205904822 . A . . LowGQX END=205904951 GT ./. chr1 206137313 . G . . LowGQX END=206137487 GT ./. chr1 206139282 . C . . LowGQX END=206139459 GT ./. chr1 206141383 . T . . LowGQX END=206141535 GT ./. chr1 206145452 . A . . LowGQX END=206145621 GT ./. chr1 206153904 . C . . LowGQX END=206154055 GT ./. chr1 206224439 . T . . LowGQX END=206225383 GT ./. chr1 206230806 . A . . LowGQX END=206231145 GT ./. chr1 206239377 . A . . LowGQX END=206239582 GT ./. chr1 206240115 . C . . LowGQX END=206240215 GT ./. chr1 206241531 . A . . LowGQX END=206241679 GT ./. chr1 206243148 . A . . LowGQX END=206243253 GT ./. chr1 206243448 . A . . LowGQX END=206243548 GT ./. chr1 206317561 . G . . LowGQX END=206317661 GT ./. chr1 206318279 . C . . LowGQX END=206318470 GT ./. chr1 206319099 . A . . LowGQX END=206319221 GT ./. chr1 206320199 . A . . LowGQX END=206320322 GT ./. chr1 206325222 . G . . LowGQX END=206325440 GT ./. chr1 206327472 . A . . LowGQX END=206327599 GT ./. chr1 206328717 . A . . LowGQX END=206328863 GT ./. chr1 206328960 . A . . LowGQX END=206329063 GT ./. chr1 206331019 . A . . LowGQX END=206331231 GT ./. chr1 206516167 . C . . LowGQX END=206516363 GT ./. chr1 206557349 . T . . LowGQX END=206557449 GT ./. chr1 206565974 . G . . LowGQX END=206566324 GT ./. chr1 206566901 . G . . LowGQX END=206567031 GT ./. chr1 206574708 . T . . LowGQX END=206575068 GT ./. chr1 206578607 . G . . LowGQX END=206578766 GT ./. chr1 206579664 . C . . LowGQX END=206580014 GT ./. chr1 206589181 . G . . LowGQX END=206589341 GT ./. chr1 206592689 . T . . LowGQX END=206592789 GT ./. chr1 206594563 . T . . LowGQX END=206594663 GT ./. chr1 206603492 . G . . LowGQX END=206603592 GT ./. chr1 206610304 . T . . LowGQX END=206610404 GT ./. chr1 206611313 . G . . LowGQX END=206611449 GT ./. chr1 206613325 . G . . LowGQX END=206613432 GT ./. chr1 206619420 . G . . LowGQX END=206619646 GT ./. chr1 206623721 . T . . LowGQX END=206623821 GT ./. chr1 206626545 . G . . LowGQX END=206626727 GT ./. chr1 206627446 . G . . LowGQX END=206627546 GT ./. chr1 206628223 . G . . LowGQX END=206628422 GT ./. chr1 206631686 . C . . LowGQX END=206631786 GT ./. chr1 206631968 . G . . LowGQX END=206632294 GT ./. chr1 206634381 . G . . LowGQX END=206634766 GT ./. chr1 206646509 . T . . LowGQX END=206646665 GT ./. chr1 206647672 . A . . LowGQX END=206647817 GT ./. chr1 206648206 . A . . LowGQX END=206648340 GT ./. chr1 206649502 . T . . LowGQX END=206649708 GT ./. chr1 206650019 . A . . LowGQX END=206650184 GT ./. chr1 206651090 . A . . LowGQX END=206651250 GT ./. chr1 206651501 . A . . LowGQX END=206651685 GT ./. chr1 206652273 . C . . LowGQX END=206652479 GT ./. chr1 206653136 . G . . LowGQX END=206653512 GT ./. chr1 206653784 . G . . LowGQX END=206653884 GT ./. chr1 206658322 . G . . LowGQX END=206658422 GT ./. chr1 206658529 . A . . LowGQX END=206658646 GT ./. chr1 206661240 . C . . LowGQX END=206661340 GT ./. chr1 206664122 . G . . LowGQX END=206664222 GT ./. chr1 206664979 . A . . LowGQX END=206665085 GT ./. chr1 206665720 . C . . LowGQX END=206666455 GT ./. chr1 206666597 . A . . LowGQX END=206666714 GT ./. chr1 206667239 . T . . LowGQX END=206667339 GT ./. chr1 206669412 . G . . LowGQX END=206669512 GT ./. chr1 206670926 . C . . LowGQX END=206671051 GT ./. chr1 206680923 . C . . LowGQX END=206681358 GT ./. chr1 206681359 . C . . LowGQX END=206681395;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 206711499 . A . . LowGQX END=206711625 GT ./. chr1 206730900 . A . . LowGQX END=206731024 GT ./. chr1 206756599 . A . . LowGQX END=206756714 GT ./. chr1 206757717 . A . . LowGQX END=206758082 GT ./. chr1 206758510 . A . . LowGQX END=206758664 GT ./. chr1 206760156 . A . . LowGQX END=206760391 GT ./. chr1 206765093 . G . . LowGQX END=206765193 GT ./. chr1 206766966 . A . . LowGQX END=206767145 GT ./. chr1 206769065 . A . . LowGQX END=206769190 GT ./. chr1 206770448 . A . . LowGQX END=206770548 GT ./. chr1 206772352 . C . . LowGQX END=206772452 GT ./. chr1 206772785 . A . . LowGQX END=206772969 GT ./. chr1 206773085 . A . . LowGQX END=206773193 GT ./. chr1 206773590 . G . . LowGQX END=206773690 GT ./. chr1 206775688 . A . . LowGQX END=206775810 GT ./. chr1 206776303 . A . . LowGQX END=206776561 GT ./. chr1 206778751 . A . . LowGQX END=206778863 GT ./. chr1 206781585 . G . . LowGQX END=206781685 GT ./. chr1 206782721 . C . . LowGQX END=206782821 GT ./. chr1 206784535 . A . . LowGQX END=206784730 GT ./. chr1 206785618 . G . . LowGQX END=206785718 GT ./. chr1 206800007 . A . . LowGQX END=206800167 GT ./. chr1 206808986 . G . . LowGQX END=206809138 GT ./. chr1 206809432 . T . . LowGQX END=206809532 GT ./. chr1 206810256 . C . . LowGQX END=206810356 GT ./. chr1 206810993 . A . . LowGQX END=206811109 GT ./. chr1 206820731 . A . . LowGQX END=206822313 GT ./. chr1 206856241 . T . . LowGQX END=206856341 GT ./. chr1 206858513 . C . . LowGQX END=206858863 GT ./. chr1 206902053 . A . . LowGQX END=206902197 GT ./. chr1 206902363 . C . . LowGQX END=206902463 GT ./. chr1 206902731 . C . . LowGQX END=206902831 GT ./. chr1 206903315 . A . . LowGQX END=206903446 GT ./. chr1 206904021 . T . . LowGQX END=206904121 GT ./. chr1 206904481 . A . . LowGQX END=206904610 GT ./. chr1 206904978 . C . . LowGQX END=206905078 GT ./. chr1 206905175 . T . . LowGQX END=206905275 GT ./. chr1 206905360 . T . . LowGQX END=206905460 GT ./. chr1 206905918 . A . . LowGQX END=206906066 GT ./. chr1 206941930 . G . . LowGQX END=206942125 GT ./. chr1 206943123 . G . . LowGQX END=206943291 GT ./. chr1 206944201 . A . . LowGQX END=206944456 GT ./. chr1 206944650 . C . . LowGQX END=206944812 GT ./. chr1 206945565 . A . . LowGQX END=206945832 GT ./. chr1 206972238 . G . . LowGQX END=206972398 GT ./. chr1 207010004 . A . . LowGQX END=207010194 GT ./. chr1 207010286 . T . . LowGQX END=207010386 GT ./. chr1 207013193 . A . . LowGQX END=207013609 GT ./. chr1 207014337 . A . . LowGQX END=207014437 GT ./. chr1 207015870 . A . . LowGQX END=207015970 GT ./. chr1 207039196 . A . . LowGQX END=207039359 GT ./. chr1 207039627 . T . . LowGQX END=207039727 GT ./. chr1 207039827 . A . . LowGQX END=207039984 GT ./. chr1 207040717 . G . . LowGQX END=207040817 GT ./. chr1 207041821 . G . . LowGQX END=207041921 GT ./. chr1 207071150 . A . . LowGQX END=207071250 GT ./. chr1 207072661 . G . . LowGQX END=207072863 GT ./. chr1 207073622 . T . . LowGQX END=207073722 GT ./. chr1 207074837 . A . . LowGQX END=207075000 GT ./. chr1 207075331 . C . . LowGQX END=207075431 GT ./. chr1 207076313 . C . . LowGQX END=207076413 GT ./. chr1 207078362 . T . . LowGQX END=207078495 GT ./. chr1 207082727 . A . . LowGQX END=207082887 GT ./. chr1 207083037 . C . . LowGQX END=207083216 GT ./. chr1 207083553 . A . . LowGQX END=207083688 GT ./. chr1 207085003 . G . . LowGQX END=207085363 GT ./. chr1 207086272 . A . . LowGQX END=207086390 GT ./. chr1 207087102 . A . . LowGQX END=207087442 GT ./. chr1 207091113 . A . . LowGQX END=207091213 GT ./. chr1 207094683 . C . . LowGQX END=207094783 GT ./. chr1 207095132 . G . . LowGQX END=207095232 GT ./. chr1 207103661 . G . . LowGQX END=207103761 GT ./. chr1 207104822 . G . . LowGQX END=207104922 GT ./. chr1 207105014 . A . . LowGQX END=207105150 GT ./. chr1 207105799 . A . . LowGQX END=207105925 GT ./. chr1 207106329 . A . . LowGQX END=207106514 GT ./. chr1 207107763 . A . . LowGQX END=207108094 GT ./. chr1 207108829 . A . . LowGQX END=207109166 GT ./. chr1 207110438 . A . . LowGQX END=207111099 GT ./. chr1 207112462 . A . . LowGQX END=207112811 GT ./. chr1 207113806 . T . . LowGQX END=207113906 GT ./. chr1 207131860 . C . . LowGQX END=207132083 GT ./. chr1 207132252 . T . . LowGQX END=207132352 GT ./. chr1 207133022 . A . . LowGQX END=207133145 GT ./. chr1 207133766 . C . . LowGQX END=207134569 GT ./. chr1 207135556 . A . . LowGQX END=207135899 GT ./. chr1 207139012 . G . . LowGQX END=207139328 GT ./. chr1 207140378 . G . . LowGQX END=207140478 GT ./. chr1 207140913 . T . . LowGQX END=207141013 GT ./. chr1 207142593 . C . . LowGQX END=207142704 GT ./. chr1 207143402 . C . . LowGQX END=207143502 GT ./. chr1 207195301 . G . . LowGQX END=207196828 GT ./. chr1 207198230 . A . . LowGQX END=207198412 GT ./. chr1 207200837 . A . . LowGQX END=207200946 GT ./. chr1 207222363 . G . . LowGQX END=207223071 GT ./. chr1 207224021 . C . . LowGQX END=207224381 GT ./. chr1 207225505 . T . . LowGQX END=207225605 GT ./. chr1 207228056 . A . . LowGQX END=207228156 GT ./. chr1 207235296 . A . . LowGQX END=207235426 GT ./. chr1 207235963 . A . . LowGQX END=207236064 GT ./. chr1 207236472 . T . . LowGQX END=207236572 GT ./. chr1 207236680 . C . . LowGQX END=207236780 GT ./. chr1 207237097 . C . . LowGQX END=207237197 GT ./. chr1 207238379 . A . . LowGQX END=207238508 GT ./. chr1 207240842 . A . . LowGQX END=207241054 GT ./. chr1 207241506 . A . . LowGQX END=207241657 GT ./. chr1 207242767 . A . . LowGQX END=207242876 GT ./. chr1 207243583 . T . . LowGQX END=207243757 GT ./. chr1 207244515 . T . . LowGQX END=207244615 GT ./. chr1 207244837 . T . . LowGQX END=207244937 GT ./. chr1 207245547 . A . . LowGQX END=207245719 GT ./. chr1 207252282 . T . . LowGQX END=207252382 GT ./. chr1 207262856 . G . . LowGQX END=207262956 GT ./. chr1 207263651 . A . . LowGQX END=207263829 GT ./. chr1 207264987 . A . . LowGQX END=207265168 GT ./. chr1 207268624 . T . . LowGQX END=207268914 GT ./. chr1 207269804 . G . . LowGQX END=207269964 GT ./. chr1 207271493 . A . . LowGQX END=207271612 GT ./. chr1 207273132 . A . . LowGQX END=207273277 GT ./. chr1 207286369 . C . . LowGQX END=207286549 GT ./. chr1 207287443 . A . . LowGQX END=207287653 GT ./. chr1 207287984 . G . . LowGQX END=207288084 GT ./. chr1 207288709 . C . . LowGQX END=207288863 GT ./. chr1 207297260 . T . . LowGQX END=207297360 GT ./. chr1 207297518 . A . . LowGQX END=207297714 GT ./. chr1 207300056 . A . . LowGQX END=207300243 GT ./. chr1 207304889 . A . . LowGQX END=207305088 GT ./. chr1 207307747 . A . . LowGQX END=207307940 GT ./. chr1 207314449 . A . . LowGQX END=207314624 GT ./. chr1 207317150 . G . . LowGQX END=207317341 GT ./. chr1 207317887 . A . . LowGQX END=207318065 GT ./. chr1 207495051 . G . . LowGQX END=207495213 GT ./. chr1 207495558 . T . . LowGQX END=207495658 GT ./. chr1 207495725 . A . . LowGQX END=207495915 GT ./. chr1 207497902 . A . . LowGQX END=207498098 GT ./. chr1 207498965 . A . . LowGQX END=207499069 GT ./. chr1 207500090 . G . . LowGQX END=207500190 GT ./. chr1 207504451 . A . . LowGQX END=207504651 GT ./. chr1 207510036 . A . . LowGQX END=207510166 GT ./. chr1 207510671 . C . . LowGQX END=207510771 GT ./. chr1 207512703 . A . . LowGQX END=207512803 GT ./. chr1 207513735 . G . . LowGQX END=207513990 GT ./. chr1 207520452 . A . . LowGQX END=207520552 GT ./. chr1 207520739 . G . . LowGQX END=207520907 GT ./. chr1 207523380 . G . . LowGQX END=207523540 GT ./. chr1 207527339 . T . . LowGQX END=207527439 GT ./. chr1 207532843 . A . . LowGQX END=207533015 GT ./. chr1 207627653 . G . . LowGQX END=207627873 GT ./. chr1 207639820 . A . . LowGQX END=207640309 GT ./. chr1 207641821 . T . . LowGQX END=207642296 GT ./. chr1 207642444 . T . . LowGQX END=207642629 GT ./. chr1 207642989 . T . . LowGQX END=207643499 GT ./. chr1 207644034 . C . . LowGQX END=207644484 GT ./. chr1 207644717 . T . . LowGQX END=207644896 GT ./. chr1 207646066 . T . . LowGQX END=207646576 GT ./. chr1 207646839 . G . . LowGQX END=207647282 GT ./. chr1 207647535 . A . . LowGQX END=207647720 GT ./. chr1 207648118 . G . . LowGQX END=207648613 GT ./. chr1 207649528 . C . . LowGQX END=207649816 GT ./. chr1 207651179 . G . . LowGQX END=207651467 GT ./. chr1 207652544 . T . . LowGQX END=207652677 GT ./. chr1 207653272 . A . . LowGQX END=207653450 GT ./. chr1 207658758 . A . . LowGQX END=207658951 GT ./. chr1 207669542 . T . . LowGQX END=207669734 GT ./. chr1 207679248 . G . . LowGQX END=207679429 GT ./. chr1 207680008 . A . . LowGQX END=207680163 GT ./. chr1 207684907 . C . . LowGQX END=207685007 GT ./. chr1 207696955 . G . . LowGQX END=207697355 GT ./. chr1 207700086 . C . . LowGQX END=207700275 GT ./. chr1 207700314 . G . . LowGQX END=207700469 GT ./. chr1 207701989 . G . . LowGQX END=207702154 GT ./. chr1 207705453 . A . . LowGQX END=207705813 GT ./. chr1 207706741 . T . . LowGQX END=207706934 GT ./. chr1 207707490 . G . . LowGQX END=207707642 GT ./. chr1 207713254 . C . . LowGQX END=207713419 GT ./. chr1 207715515 . C . . LowGQX END=207715935 GT ./. chr1 207718641 . C . . LowGQX END=207718830 GT ./. chr1 207718869 . G . . LowGQX END=207719024 GT ./. chr1 207720544 . G . . LowGQX END=207720709 GT ./. chr1 207724008 . A . . LowGQX END=207724368 GT ./. chr1 207725308 . G . . LowGQX END=207725507 GT ./. chr1 207726045 . G . . LowGQX END=207726256 GT ./. chr1 207731811 . C . . LowGQX END=207731976 GT ./. chr1 207732304 . A . . LowGQX END=207732464 GT ./. chr1 207734072 . C . . LowGQX END=207734492 GT ./. chr1 207737197 . C . . LowGQX END=207737386 GT ./. chr1 207737476 . G . . LowGQX END=207737580 GT ./. chr1 207739176 . T . . LowGQX END=207739276 GT ./. chr1 207741168 . G . . LowGQX END=207741388 GT ./. chr1 207742403 . G . . LowGQX END=207742602 GT ./. chr1 207743140 . G . . LowGQX END=207743296 GT ./. chr1 207748933 . C . . LowGQX END=207749033 GT ./. chr1 207751149 . G . . LowGQX END=207751549 GT ./. chr1 207753584 . G . . LowGQX END=207753762 GT ./. chr1 207753855 . G . . LowGQX END=207753959 GT ./. chr1 207755256 . T . . LowGQX END=207755356 GT ./. chr1 207757993 . G . . LowGQX END=207758222 GT ./. chr1 207760730 . G . . LowGQX END=207760911 GT ./. chr1 207761969 . A . . LowGQX END=207762120 GT ./. chr1 207780589 . G . . LowGQX END=207780689 GT ./. chr1 207782634 . G . . LowGQX END=207783034 GT ./. chr1 207785021 . G . . LowGQX END=207785199 GT ./. chr1 207785283 . G . . LowGQX END=207785387 GT ./. chr1 207787742 . T . . LowGQX END=207787842 GT ./. chr1 207789919 . G . . LowGQX END=207790148 GT ./. chr1 207791415 . G . . LowGQX END=207791593 GT ./. chr1 207793194 . A . . LowGQX END=207793411 GT ./. chr1 207795280 . G . . LowGQX END=207795380 GT ./. chr1 207796326 . T . . LowGQX END=207796426 GT ./. chr1 207803861 . G . . LowGQX END=207803973 GT ./. chr1 207812698 . G . . LowGQX END=207812798 GT ./. chr1 207818577 . T . . LowGQX END=207818677 GT ./. chr1 207850733 . G . . LowGQX END=207850914 GT ./. chr1 207851492 . A . . LowGQX END=207851643 GT ./. chr1 207857210 . C . . LowGQX END=207857310 GT ./. chr1 207867697 . G . . LowGQX END=207868097 GT ./. chr1 207870847 . G . . LowGQX END=207871025 GT ./. chr1 207871115 . G . . LowGQX END=207871219 GT ./. chr1 207872527 . T . . LowGQX END=207872627 GT ./. chr1 207874863 . G . . LowGQX END=207874964 GT ./. chr1 207875023 . G . . LowGQX END=207875123 GT ./. chr1 207881516 . C . . LowGQX END=207881616 GT ./. chr1 207888609 . G . . LowGQX END=207888709 GT ./. chr1 207890808 . G . . LowGQX END=207891037 GT ./. chr1 207896947 . T . . LowGQX END=207897047 GT ./. chr1 207925507 . T . . LowGQX END=207925706 GT ./. chr1 207930308 . T . . LowGQX END=207930599 GT ./. chr1 207930834 . C . . LowGQX END=207931039 GT ./. chr1 207932933 . G . . LowGQX END=207933121 GT ./. chr1 207934543 . A . . LowGQX END=207934843 GT ./. chr1 207940307 . T . . LowGQX END=207940592 GT ./. chr1 207940901 . A . . LowGQX END=207941048 GT ./. chr1 207941073 . C . . LowGQX END=207941220 GT ./. chr1 207943615 . T . . LowGQX END=207943759 GT ./. chr1 207956586 . A . . LowGQX END=207956727 GT ./. chr1 207958364 . T . . LowGQX END=207958503 GT ./. chr1 207958913 . T . . LowGQX END=207959079 GT ./. chr1 207963547 . T . . LowGQX END=207963701 GT ./. chr1 207966813 . T . . LowGQX END=207966992 GT ./. chr1 207975191 . T . . LowGQX END=207975291 GT ./. chr1 207975779 . C . . LowGQX END=207975879 GT ./. chr1 207990694 . A . . LowGQX END=207990794 GT ./. chr1 207992306 . C . . LowGQX END=207992492 GT ./. chr1 208040883 . T . . LowGQX END=208041213 GT ./. chr1 208041270 . C . . LowGQX END=208041370 GT ./. chr1 208042331 . C . . LowGQX END=208042496 GT ./. chr1 208050275 . A . . LowGQX END=208050375 GT ./. chr1 208061081 . A . . LowGQX END=208061271 GT ./. chr1 208061407 . G . . LowGQX END=208061507 GT ./. chr1 208062025 . A . . LowGQX END=208062194 GT ./. chr1 208062483 . G . . LowGQX END=208062583 GT ./. chr1 208062808 . A . . LowGQX END=208062969 GT ./. chr1 208063018 . C . . LowGQX END=208063229 GT ./. chr1 208070829 . T . . LowGQX END=208070929 GT ./. chr1 208072316 . A . . LowGQX END=208072574 GT ./. chr1 208073164 . A . . LowGQX END=208073351 GT ./. chr1 208084277 . C . . LowGQX END=208084437 GT ./. chr1 208200586 . T . . LowGQX END=208200686 GT ./. chr1 208201352 . A . . LowGQX END=208201507 GT ./. chr1 208202173 . A . . LowGQX END=208202423 GT ./. chr1 208204922 . C . . LowGQX END=208205107 GT ./. chr1 208206662 . A . . LowGQX END=208206857 GT ./. chr1 208207836 . A . . LowGQX END=208207940 GT ./. chr1 208211714 . A . . LowGQX END=208211822 GT ./. chr1 208212168 . A . . LowGQX END=208212332 GT ./. chr1 208212964 . A . . LowGQX END=208213115 GT ./. chr1 208213261 . C . . LowGQX END=208213421 GT ./. chr1 208215441 . A . . LowGQX END=208215714 GT ./. chr1 208216404 . A . . LowGQX END=208216551 GT ./. chr1 208217851 . A . . LowGQX END=208218090 GT ./. chr1 208218410 . A . . LowGQX END=208218558 GT ./. chr1 208219221 . A . . LowGQX END=208219465 GT ./. chr1 208224351 . C . . LowGQX END=208224451 GT ./. chr1 208224599 . A . . LowGQX END=208224789 GT ./. chr1 208225670 . A . . LowGQX END=208225811 GT ./. chr1 208227764 . A . . LowGQX END=208227886 GT ./. chr1 208234029 . A . . LowGQX END=208234185 GT ./. chr1 208252603 . A . . LowGQX END=208252798 GT ./. chr1 208255755 . A . . LowGQX END=208255856 GT ./. chr1 208257723 . A . . LowGQX END=208257928 GT ./. chr1 208266129 . A . . LowGQX END=208266248 GT ./. chr1 208269372 . A . . LowGQX END=208269473 GT ./. chr1 208270073 . A . . LowGQX END=208270231 GT ./. chr1 208272189 . A . . LowGQX END=208272317 GT ./. chr1 208276439 . A . . LowGQX END=208276595 GT ./. chr1 208315672 . A . . LowGQX END=208315811 GT ./. chr1 208383499 . T . . LowGQX END=208383810 GT ./. chr1 208390078 . A . . LowGQX END=208391430 GT ./. chr1 209602642 . C . . LowGQX END=209602754 GT ./. chr1 209603746 . C . . LowGQX END=209603846 GT ./. chr1 209605478 . A . . LowGQX END=209605695 GT ./. chr1 209768325 . G . . LowGQX END=209768425 GT ./. chr1 209773286 . C . . LowGQX END=209773459 GT ./. chr1 209776487 . G . . LowGQX END=209776647 GT ./. chr1 209778879 . A . . LowGQX END=209779022 GT ./. chr1 209779663 . A . . LowGQX END=209779791 GT ./. chr1 209781191 . G . . LowGQX END=209781291 GT ./. chr1 209782323 . A . . LowGQX END=209782440 GT ./. chr1 209783186 . C . . LowGQX END=209783286 GT ./. chr1 209784804 . C . . LowGQX END=209784904 GT ./. chr1 209785135 . A . . LowGQX END=209785605 GT ./. chr1 209786126 . C . . LowGQX END=209786226 GT ./. chr1 209788565 . C . . LowGQX END=209788804 GT ./. chr1 209789765 . A . . LowGQX END=209790021 GT ./. chr1 209790704 . G . . LowGQX END=209790983 GT ./. chr1 209791201 . A . . LowGQX END=209791445 GT ./. chr1 209791746 . A . . LowGQX END=209792056 GT ./. chr1 209795830 . G . . LowGQX END=209796077 GT ./. chr1 209796276 . A . . LowGQX END=209796576 GT ./. chr1 209796799 . G . . LowGQX END=209797122 GT ./. chr1 209797134 . C . . LowGQX END=209797397 GT ./. chr1 209798942 . G . . LowGQX END=209799327 GT ./. chr1 209799328 . G . . LowGQX END=209799372;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 209799373 . T . . LowGQX . GT ./. chr1 209799374 . A . . LowGQX END=209799378;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 209799379 . C . . LowGQX . GT ./. chr1 209799380 . A . . LowGQX END=209799410;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 209799411 . G . . LowGQX . GT ./. chr1 209799412 . G . . LowGQX END=209799423;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 209800161 . C . . LowGQX END=209800375 GT ./. chr1 209800677 . T . . LowGQX END=209800976 GT ./. chr1 209801329 . T . . LowGQX END=209801587 GT ./. chr1 209803031 . A . . LowGQX END=209803322 GT ./. chr1 209803881 . C . . LowGQX END=209804132 GT ./. chr1 209805877 . T . . LowGQX END=209806173 GT ./. chr1 209806364 . G . . LowGQX END=209806530 GT ./. chr1 209807741 . G . . LowGQX END=209808035 GT ./. chr1 209811202 . A . . LowGQX END=209811378 GT ./. chr1 209811828 . T . . LowGQX END=209812045 GT ./. chr1 209823258 . C . . LowGQX END=209823515 GT ./. chr1 209824211 . T . . LowGQX END=209824346 GT ./. chr1 209849028 . A . . LowGQX END=209849344 GT ./. chr1 209878237 . T . . LowGQX END=209878427 GT ./. chr1 209879105 . A . . LowGQX END=209879338 GT ./. chr1 209880003 . C . . LowGQX END=209880217 GT ./. chr1 209880237 . T . . LowGQX END=209880525 GT ./. chr1 209905730 . G . . LowGQX END=209905966 GT ./. chr1 209907598 . A . . LowGQX END=209907918 GT ./. chr1 209933383 . T . . LowGQX END=209933730 GT ./. chr1 209935858 . A . . LowGQX END=209936010 GT ./. chr1 209936137 . A . . LowGQX END=209936237 GT ./. chr1 209936376 . G . . LowGQX END=209936476 GT ./. chr1 209936673 . C . . LowGQX END=209936773 GT ./. chr1 209936835 . A . . LowGQX END=209936935 GT ./. chr1 209946221 . A . . LowGQX END=209946379 GT ./. chr1 209948692 . A . . LowGQX END=209948934 GT ./. chr1 209948942 . A . . LowGQX END=209949084 GT ./. chr1 209950695 . A . . LowGQX END=209950835 GT ./. chr1 209951438 . G . . LowGQX END=209951538 GT ./. chr1 209952654 . C . . LowGQX END=209952837 GT ./. chr1 209953813 . A . . LowGQX END=209953954 GT ./. chr1 209954688 . A . . LowGQX END=209954806 GT ./. chr1 209955398 . C . . LowGQX END=209955498 GT ./. chr1 209956168 . A . . LowGQX END=209956982 GT ./. chr1 209961714 . T . . LowGQX END=209962041 GT ./. chr1 209962949 . G . . LowGQX END=209963182 GT ./. chr1 209963789 . T . . LowGQX END=209964284 GT ./. chr1 209965563 . A . . LowGQX END=209965824 GT ./. chr1 209968584 . A . . LowGQX END=209968815 GT ./. chr1 209969642 . G . . LowGQX END=209969949 GT ./. chr1 209974534 . A . . LowGQX END=209974810 GT ./. chr1 210001356 . T . . LowGQX END=210001567 GT ./. chr1 210003423 . T . . LowGQX END=210003523 GT ./. chr1 210004146 . A . . LowGQX END=210004391 GT ./. chr1 210006517 . C . . LowGQX END=210006706 GT ./. chr1 210008415 . A . . LowGQX END=210008515 GT ./. chr1 210010144 . A . . LowGQX END=210010559 GT ./. chr1 210012150 . A . . LowGQX END=210012476 GT ./. chr1 210014196 . A . . LowGQX END=210014403 GT ./. chr1 210015608 . A . . LowGQX END=210015826 GT ./. chr1 210015926 . A . . LowGQX END=210016043 GT ./. chr1 210016794 . A . . LowGQX END=210017044 GT ./. chr1 210024547 . A . . LowGQX END=210024795 GT ./. chr1 210111481 . G . . LowGQX END=210111674 GT ./. chr1 210126003 . G . . LowGQX END=210126153 GT ./. chr1 210126399 . G . . LowGQX END=210126605 GT ./. chr1 210139205 . G . . LowGQX END=210139359 GT ./. chr1 210186927 . G . . LowGQX END=210187194 GT ./. chr1 210194333 . G . . LowGQX END=210194651 GT ./. chr1 210267616 . T . . LowGQX END=210267990 GT ./. chr1 210273306 . A . . LowGQX END=210273858 GT ./. chr1 210329015 . T . . LowGQX END=210329307 GT ./. chr1 210330175 . C . . LowGQX END=210330275 GT ./. chr1 210332705 . T . . LowGQX END=210332864 GT ./. chr1 210334023 . T . . LowGQX END=210337634 GT ./. chr1 210405065 . T . . LowGQX END=210405165 GT ./. chr1 210406979 . C . . LowGQX END=210407289 GT ./. chr1 210411284 . T . . LowGQX END=210411483 GT ./. chr1 210412776 . T . . LowGQX END=210412956 GT ./. chr1 210414901 . A . . LowGQX END=210415685 GT ./. chr1 210502352 . C . . LowGQX END=210502503 GT ./. chr1 210522316 . A . . LowGQX END=210522416 GT ./. chr1 210536180 . T . . LowGQX END=210536280 GT ./. chr1 210560810 . A . . LowGQX END=210560928 GT ./. chr1 210573810 . A . . LowGQX END=210574009 GT ./. chr1 210577806 . A . . LowGQX END=210578026 GT ./. chr1 210591476 . A . . LowGQX END=210591672 GT ./. chr1 210637847 . A . . LowGQX END=210638002 GT ./. chr1 210686405 . A . . LowGQX END=210686565 GT ./. chr1 210761240 . A . . LowGQX END=210761446 GT ./. chr1 210796868 . A . . LowGQX END=210797017 GT ./. chr1 210804340 . G . . LowGQX END=210804508 GT ./. chr1 210847626 . G . . LowGQX END=210847726 GT ./. chr1 210856621 . T . . LowGQX END=210857483 GT ./. chr1 210948688 . A . . LowGQX END=210948889 GT ./. chr1 210970848 . A . . LowGQX END=210971105 GT ./. chr1 210977307 . A . . LowGQX END=210977511 GT ./. chr1 211092980 . A . . LowGQX END=211093414 GT ./. chr1 211192123 . A . . LowGQX END=211192601 GT ./. chr1 211256120 . A . . LowGQX END=211256243 GT ./. chr1 211263902 . A . . LowGQX END=211264072 GT ./. chr1 211276836 . A . . LowGQX END=211276947 GT ./. chr1 211280594 . A . . LowGQX END=211280722 GT ./. chr1 211307199 . C . . LowGQX END=211307299 GT ./. chr1 211432881 . T . . LowGQX END=211433069 GT ./. chr1 211433429 . T . . LowGQX END=211433529 GT ./. chr1 211441115 . A . . LowGQX END=211441266 GT ./. chr1 211444563 . T . . LowGQX END=211444663 GT ./. chr1 211444823 . T . . LowGQX END=211444923 GT ./. chr1 211447529 . T . . LowGQX END=211447629 GT ./. chr1 211449597 . A . . LowGQX END=211449763 GT ./. chr1 211451397 . A . . LowGQX END=211451626 GT ./. chr1 211452570 . T . . LowGQX END=211452670 GT ./. chr1 211462518 . A . . LowGQX END=211462741 GT ./. chr1 211464864 . A . . LowGQX END=211464964 GT ./. chr1 211469007 . T . . LowGQX END=211469107 GT ./. chr1 211477404 . A . . LowGQX END=211477504 GT ./. chr1 211485657 . C . . LowGQX END=211485757 GT ./. chr1 211486060 . A . . LowGQX END=211486337 GT ./. chr1 211486764 . A . . LowGQX END=211487113 GT ./. chr1 211526580 . G . . LowGQX END=211526802 GT ./. chr1 211527731 . C . . LowGQX END=211527831 GT ./. chr1 211529707 . A . . LowGQX END=211529813 GT ./. chr1 211533221 . C . . LowGQX END=211533421 GT ./. chr1 211534033 . C . . LowGQX END=211534133 GT ./. chr1 211534418 . T . . LowGQX END=211534518 GT ./. chr1 211538715 . A . . LowGQX END=211538815 GT ./. chr1 211542792 . A . . LowGQX END=211542937 GT ./. chr1 211544642 . A . . LowGQX END=211544832 GT ./. chr1 211545468 . A . . LowGQX END=211546047 GT ./. chr1 211652327 . T . . LowGQX END=211652721 GT ./. chr1 211654411 . C . . LowGQX END=211654809 GT ./. chr1 211748728 . A . . LowGQX END=211749634 GT ./. chr1 211751323 . C . . LowGQX END=211751957 GT ./. chr1 211831917 . T . . LowGQX END=211832077 GT ./. chr1 211836766 . G . . LowGQX END=211836997 GT ./. chr1 211840383 . G . . LowGQX END=211840576 GT ./. chr1 211842453 . A . . LowGQX END=211842677 GT ./. chr1 211843621 . A . . LowGQX END=211843752 GT ./. chr1 211844536 . A . . LowGQX END=211844636 GT ./. chr1 211846823 . A . . LowGQX END=211847068 GT ./. chr1 211847636 . A . . LowGQX END=211847858 GT ./. chr1 211848724 . A . . LowGQX END=211848824 GT ./. chr1 211923209 . C . . LowGQX END=211923395 GT ./. chr1 211924301 . A . . LowGQX END=211924412 GT ./. chr1 211952258 . A . . LowGQX END=211952389 GT ./. chr1 211956569 . A . . LowGQX END=211956847 GT ./. chr1 211960972 . A . . LowGQX END=211961072 GT ./. chr1 211966412 . A . . LowGQX END=211966535 GT ./. chr1 212002399 . A . . LowGQX END=212002641 GT ./. chr1 212115164 . G . . LowGQX END=212115456 GT ./. chr1 212118124 . A . . LowGQX END=212118314 GT ./. chr1 212119947 . A . . LowGQX END=212120050 GT ./. chr1 212125909 . G . . LowGQX END=212126089 GT ./. chr1 212139757 . T . . LowGQX END=212139857 GT ./. chr1 212141168 . T . . LowGQX END=212141326 GT ./. chr1 212141853 . G . . LowGQX END=212142052 GT ./. chr1 212148506 . A . . LowGQX END=212148717 GT ./. chr1 212149922 . A . . LowGQX END=212150064 GT ./. chr1 212151612 . A . . LowGQX END=212151856 GT ./. chr1 212154433 . A . . LowGQX END=212154535 GT ./. chr1 212156016 . A . . LowGQX END=212156155 GT ./. chr1 212161226 . A . . LowGQX END=212161348 GT ./. chr1 212179979 . A . . LowGQX END=212180106 GT ./. chr1 212180590 . A . . LowGQX END=212180794 GT ./. chr1 212184691 . C . . LowGQX END=212184791 GT ./. chr1 212190186 . G . . LowGQX END=212190368 GT ./. chr1 212193462 . A . . LowGQX END=212193613 GT ./. chr1 212194423 . A . . LowGQX END=212194557 GT ./. chr1 212208683 . T . . LowGQX END=212208783 GT ./. chr1 212209209 . G . . LowGQX END=212209309 GT ./. chr1 212216333 . A . . LowGQX END=212216463 GT ./. chr1 212218000 . A . . LowGQX END=212218103 GT ./. chr1 212220474 . T . . LowGQX END=212220574 GT ./. chr1 212220637 . A . . LowGQX END=212220762 GT ./. chr1 212236209 . T . . LowGQX END=212236309 GT ./. chr1 212238257 . A . . LowGQX END=212238374 GT ./. chr1 212240141 . C . . LowGQX END=212240241 GT ./. chr1 212241564 . A . . LowGQX END=212241672 GT ./. chr1 212241939 . A . . LowGQX END=212242048 GT ./. chr1 212245441 . A . . LowGQX END=212245558 GT ./. chr1 212251510 . A . . LowGQX END=212251610 GT ./. chr1 212253955 . A . . LowGQX END=212254095 GT ./. chr1 212273592 . A . . LowGQX END=212274429 GT ./. chr1 212276182 . A . . LowGQX END=212276285 GT ./. chr1 212459431 . G . . LowGQX END=212459636 GT ./. chr1 212475380 . G . . LowGQX END=212475480 GT ./. chr1 212502475 . A . . LowGQX END=212502676 GT ./. chr1 212506837 . A . . LowGQX END=212506943 GT ./. chr1 212515527 . T . . LowGQX END=212515627 GT ./. chr1 212519103 . T . . LowGQX END=212519278 GT ./. chr1 212520617 . A . . LowGQX END=212520769 GT ./. chr1 212521679 . A . . LowGQX END=212521842 GT ./. chr1 212522508 . A . . LowGQX END=212522608 GT ./. chr1 212526120 . A . . LowGQX END=212526293 GT ./. chr1 212529944 . T . . LowGQX END=212530044 GT ./. chr1 212530290 . A . . LowGQX END=212530414 GT ./. chr1 212530497 . A . . LowGQX END=212530667 GT ./. chr1 212532026 . A . . LowGQX END=212532132 GT ./. chr1 212533978 . A . . LowGQX END=212534115 GT ./. chr1 212538555 . C . . LowGQX END=212538721 GT ./. chr1 212548533 . A . . LowGQX END=212548645 GT ./. chr1 212550902 . A . . LowGQX END=212551051 GT ./. chr1 212553235 . A . . LowGQX END=212553382 GT ./. chr1 212558614 . A . . LowGQX END=212558770 GT ./. chr1 212560231 . A . . LowGQX END=212560445 GT ./. chr1 212583765 . A . . LowGQX END=212583866 GT ./. chr1 212587239 . C . . LowGQX END=212587423 GT ./. chr1 212588032 . A . . LowGQX END=212588132 GT ./. chr1 212606273 . C . . LowGQX END=212606465 GT ./. chr1 212615888 . C . . LowGQX END=212615988 GT ./. chr1 212617679 . A . . LowGQX END=212617787 GT ./. chr1 212619170 . A . . LowGQX END=212619351 GT ./. chr1 212788313 . A . . LowGQX END=212788655 GT ./. chr1 212791418 . T . . LowGQX END=212791637 GT ./. chr1 212792337 . A . . LowGQX END=212792499 GT ./. chr1 212792649 . C . . LowGQX END=212792949 GT ./. chr1 212798218 . C . . LowGQX END=212800007 GT ./. chr1 212860131 . C . . LowGQX END=212860324 GT ./. chr1 212870301 . A . . LowGQX END=212870410 GT ./. chr1 212873010 . T . . LowGQX END=212873162 GT ./. chr1 212900393 . G . . LowGQX END=212900553 GT ./. chr1 212911748 . G . . LowGQX END=212912031 GT ./. chr1 212912860 . A . . LowGQX END=212912960 GT ./. chr1 212937315 . A . . LowGQX END=212937415 GT ./. chr1 212939523 . A . . LowGQX END=212939623 GT ./. chr1 212955351 . T . . LowGQX END=212955451 GT ./. chr1 212955692 . C . . LowGQX END=212955792 GT ./. chr1 212957703 . A . . LowGQX END=212957838 GT ./. chr1 212960891 . A . . LowGQX END=212960991 GT ./. chr1 212964870 . A . . LowGQX END=212965108 GT ./. chr1 212965247 . G . . LowGQX END=212965347 GT ./. chr1 212968070 . A . . LowGQX END=212968170 GT ./. chr1 212968404 . T . . LowGQX END=212968504 GT ./. chr1 212969787 . A . . LowGQX END=212969946 GT ./. chr1 212970447 . T . . LowGQX END=212970547 GT ./. chr1 212976025 . T . . LowGQX END=212976125 GT ./. chr1 212977660 . A . . LowGQX END=212977774 GT ./. chr1 212977916 . A . . LowGQX END=212978016 GT ./. chr1 212981076 . A . . LowGQX END=212981193 GT ./. chr1 212985568 . G . . LowGQX END=212985728 GT ./. chr1 212988353 . A . . LowGQX END=212988501 GT ./. chr1 213003492 . G . . LowGQX END=213003644 GT ./. chr1 213009213 . A . . LowGQX END=213009494 GT ./. chr1 213031744 . G . . LowGQX END=213032584 GT ./. chr1 213037016 . T . . LowGQX END=213037263 GT ./. chr1 213045969 . C . . LowGQX END=213046212 GT ./. chr1 213056662 . T . . LowGQX END=213056832 GT ./. chr1 213058584 . G . . LowGQX END=213058790 GT ./. chr1 213061182 . T . . LowGQX END=213061395 GT ./. chr1 213061780 . G . . LowGQX END=213061988 GT ./. chr1 213062437 . G . . LowGQX END=213062651 GT ./. chr1 213068272 . T . . LowGQX END=213068447 GT ./. chr1 213068507 . A . . LowGQX END=213068684 GT ./. chr1 213124883 . C . . LowGQX END=213125163 GT ./. chr1 213134503 . T . . LowGQX END=213134603 GT ./. chr1 213139042 . T . . LowGQX END=213139142 GT ./. chr1 213139600 . C . . LowGQX END=213139700 GT ./. chr1 213140413 . T . . LowGQX END=213140513 GT ./. chr1 213145910 . A . . LowGQX END=213146310 GT ./. chr1 213146725 . C . . LowGQX END=213146825 GT ./. chr1 213147295 . A . . LowGQX END=213147415 GT ./. chr1 213161841 . C . . LowGQX END=213161941 GT ./. chr1 213168381 . A . . LowGQX END=213168537 GT ./. chr1 213170495 . A . . LowGQX END=213170663 GT ./. chr1 213173647 . C . . LowGQX END=213173747 GT ./. chr1 213174126 . A . . LowGQX END=213174296 GT ./. chr1 213178373 . A . . LowGQX END=213178799 GT ./. chr1 213180326 . C . . LowGQX END=213180543 GT ./. chr1 213181550 . A . . LowGQX END=213181811 GT ./. chr1 213184503 . C . . LowGQX END=213184603 GT ./. chr1 213186433 . A . . LowGQX END=213186763 GT ./. chr1 213188935 . G . . LowGQX END=213189035 GT ./. chr1 213224745 . G . . LowGQX END=213224854 GT ./. chr1 213244256 . T . . LowGQX END=213244416 GT ./. chr1 213251036 . A . . LowGQX END=213251161 GT ./. chr1 213277794 . A . . LowGQX END=213277914 GT ./. chr1 213290656 . T . . LowGQX END=213290756 GT ./. chr1 213302868 . A . . LowGQX END=213303235 GT ./. chr1 213341199 . A . . LowGQX END=213341319 GT ./. chr1 213349740 . T . . LowGQX END=213349840 GT ./. chr1 213403758 . C . . LowGQX END=213403914 GT ./. chr1 213405464 . A . . LowGQX END=213405601 GT ./. chr1 213414043 . A . . LowGQX END=213415694 GT ./. chr1 213415907 . T . . LowGQX END=213416007 GT ./. chr1 213434893 . G . . LowGQX END=213434993 GT ./. chr1 213436062 . A . . LowGQX END=213436162 GT ./. chr1 213445865 . A . . LowGQX END=213445980 GT ./. chr1 214169877 . T . . LowGQX END=214171606 GT ./. chr1 214178506 . A . . LowGQX END=214178618 GT ./. chr1 214184862 . A . . LowGQX END=214185061 GT ./. chr1 214208990 . A . . LowGQX END=214209180 GT ./. chr1 214454585 . C . . LowGQX END=214454796 GT ./. chr1 214478512 . G . . LowGQX END=214478612 GT ./. chr1 214488103 . A . . LowGQX END=214488218 GT ./. chr1 214491350 . A . . LowGQX END=214491503 GT ./. chr1 214492200 . A . . LowGQX END=214492329 GT ./. chr1 214497968 . C . . LowGQX END=214498068 GT ./. chr1 214500963 . A . . LowGQX END=214501070 GT ./. chr1 214503509 . A . . LowGQX END=214503624 GT ./. chr1 214504291 . A . . LowGQX END=214504416 GT ./. chr1 214505359 . A . . LowGQX END=214505538 GT ./. chr1 214507541 . A . . LowGQX END=214507654 GT ./. chr1 214510038 . T . . LowGQX END=214510138 GT ./. chr1 214531263 . G . . LowGQX END=214531396 GT ./. chr1 214537853 . A . . LowGQX END=214538021 GT ./. chr1 214542798 . A . . LowGQX END=214543037 GT ./. chr1 214546012 . T . . LowGQX END=214546185 GT ./. chr1 214549560 . A . . LowGQX END=214549783 GT ./. chr1 214551300 . A . . LowGQX END=214551448 GT ./. chr1 214556652 . A . . LowGQX END=214558134 GT ./. chr1 214560177 . C . . LowGQX END=214560277 GT ./. chr1 214564310 . C . . LowGQX END=214564410 GT ./. chr1 214567030 . T . . LowGQX END=214567130 GT ./. chr1 214568170 . A . . LowGQX END=214568389 GT ./. chr1 214571251 . A . . LowGQX END=214571351 GT ./. chr1 214575022 . T . . LowGQX END=214575176 GT ./. chr1 214576212 . T . . LowGQX END=214576312 GT ./. chr1 214584955 . A . . LowGQX END=214585111 GT ./. chr1 214587970 . A . . LowGQX END=214588072 GT ./. chr1 214625146 . A . . LowGQX END=214625320 GT ./. chr1 214637971 . A . . LowGQX END=214638149 GT ./. chr1 214787096 . A . . LowGQX END=214787262 GT ./. chr1 214788173 . A . . LowGQX END=214788374 GT ./. chr1 214791914 . A . . LowGQX END=214792040 GT ./. chr1 214792468 . C . . LowGQX END=214792620 GT ./. chr1 214793996 . A . . LowGQX END=214794292 GT ./. chr1 214795420 . A . . LowGQX END=214795627 GT ./. chr1 214802387 . A . . LowGQX END=214802517 GT ./. chr1 214803875 . A . . LowGQX END=214804008 GT ./. chr1 214805821 . A . . LowGQX END=214805948 GT ./. chr1 214811167 . A . . LowGQX END=214811347 GT ./. chr1 214813262 . A . . LowGQX END=214816670 GT ./. chr1 214817898 . A . . LowGQX END=214820746 GT ./. chr1 214821266 . G . . LowGQX END=214821366 GT ./. chr1 214821785 . C . . LowGQX END=214821885 GT ./. chr1 214822016 . A . . LowGQX END=214822173 GT ./. chr1 214825051 . A . . LowGQX END=214825232 GT ./. chr1 214826169 . A . . LowGQX END=214826335 GT ./. chr1 214826383 . T . . LowGQX END=214826483 GT ./. chr1 214828582 . A . . LowGQX END=214828749 GT ./. chr1 214830274 . A . . LowGQX END=214830755 GT ./. chr1 214832191 . A . . LowGQX END=214832374 GT ./. chr1 214836932 . A . . LowGQX END=214837140 GT ./. chr1 215179232 . A . . LowGQX END=215179332 GT ./. chr1 215256601 . A . . LowGQX END=215256802 GT ./. chr1 215259709 . A . . LowGQX END=215260024 GT ./. chr1 215297914 . T . . LowGQX END=215298096 GT ./. chr1 215342540 . A . . LowGQX END=215342730 GT ./. chr1 215345338 . A . . LowGQX END=215345529 GT ./. chr1 215368254 . A . . LowGQX END=215368438 GT ./. chr1 215408169 . A . . LowGQX END=215408491 GT ./. chr1 215740966 . G . . LowGQX END=215741121 GT ./. chr1 215747106 . T . . LowGQX END=215747206 GT ./. chr1 215747389 . T . . LowGQX END=215747489 GT ./. chr1 215749171 . T . . LowGQX END=215749382 GT ./. chr1 215750993 . C . . LowGQX END=215751093 GT ./. chr1 215751331 . G . . LowGQX END=215751431 GT ./. chr1 215752291 . A . . LowGQX END=215752520 GT ./. chr1 215753248 . A . . LowGQX END=215753348 GT ./. chr1 215754253 . A . . LowGQX END=215754413 GT ./. chr1 215759836 . A . . LowGQX END=215760031 GT ./. chr1 215768696 . A . . LowGQX END=215768816 GT ./. chr1 215775203 . C . . LowGQX END=215775303 GT ./. chr1 215775425 . A . . LowGQX END=215775546 GT ./. chr1 215777472 . A . . LowGQX END=215777647 GT ./. chr1 215781357 . A . . LowGQX END=215781517 GT ./. chr1 215785115 . A . . LowGQX END=215785266 GT ./. chr1 215791404 . A . . LowGQX END=215791504 GT ./. chr1 215792216 . T . . LowGQX END=215792415 GT ./. chr1 215792493 . A . . LowGQX END=215792636 GT ./. chr1 215793397 . A . . LowGQX END=215793963 GT ./. chr1 215799072 . A . . LowGQX END=215799264 GT ./. chr1 215802105 . T . . LowGQX END=215802429 GT ./. chr1 215803517 . G . . LowGQX END=215803617 GT ./. chr1 215807750 . A . . LowGQX END=215808097 GT ./. chr1 215812446 . T . . LowGQX END=215812632 GT ./. chr1 215813849 . G . . LowGQX END=215814128 GT ./. chr1 215820813 . C . . LowGQX END=215821124 GT ./. chr1 215821819 . G . . LowGQX END=215822160 GT ./. chr1 215823883 . T . . LowGQX END=215824195 GT ./. chr1 215844263 . C . . LowGQX END=215844687 GT ./. chr1 215847391 . A . . LowGQX END=215849010 GT ./. chr1 215853440 . T . . LowGQX END=215853770 GT ./. chr1 215901321 . A . . LowGQX END=215901778 GT ./. chr1 215914666 . A . . LowGQX END=215914931 GT ./. chr1 215916468 . A . . LowGQX END=215916729 GT ./. chr1 215931886 . T . . LowGQX END=215932146 GT ./. chr1 215932951 . A . . LowGQX END=215933237 GT ./. chr1 215939972 . A . . LowGQX END=215940182 GT ./. chr1 215953134 . C . . LowGQX END=215953435 GT ./. chr1 215955333 . T . . LowGQX END=215955590 GT ./. chr1 215956029 . C . . LowGQX END=215956329 GT ./. chr1 215959961 . G . . LowGQX END=215960268 GT ./. chr1 215963350 . T . . LowGQX END=215963676 GT ./. chr1 215972198 . C . . LowGQX END=215972519 GT ./. chr1 215987025 . T . . LowGQX END=215987298 GT ./. chr1 215990288 . G . . LowGQX END=215990589 GT ./. chr1 216011282 . C . . LowGQX END=216011497 GT ./. chr1 216017585 . G . . LowGQX END=216017890 GT ./. chr1 216019115 . T . . LowGQX END=216019427 GT ./. chr1 216040298 . T . . LowGQX END=216040564 GT ./. chr1 216051049 . A . . LowGQX END=216051274 GT ./. chr1 216052055 . C . . LowGQX END=216052492 GT ./. chr1 216061717 . C . . LowGQX END=216062448 GT ./. chr1 216073366 . T . . LowGQX END=216073611 GT ./. chr1 216074046 . T . . LowGQX END=216074299 GT ./. chr1 216107907 . A . . LowGQX END=216108189 GT ./. chr1 216138608 . A . . LowGQX END=216138873 GT ./. chr1 216143916 . A . . LowGQX END=216144170 GT ./. chr1 216166311 . T . . LowGQX END=216166561 GT ./. chr1 216172178 . G . . LowGQX END=216172452 GT ./. chr1 216173694 . C . . LowGQX END=216173956 GT ./. chr1 216219722 . T . . LowGQX END=216219986 GT ./. chr1 216221825 . T . . LowGQX END=216222041 GT ./. chr1 216243392 . C . . LowGQX END=216243686 GT ./. chr1 216246180 . A . . LowGQX END=216246363 GT ./. chr1 216246388 . G . . LowGQX END=216246694 GT ./. chr1 216251380 . T . . LowGQX END=216251756 GT ./. chr1 216256747 . A . . LowGQX END=216256980 GT ./. chr1 216257989 . G . . LowGQX END=216258271 GT ./. chr1 216260010 . G . . LowGQX END=216260214 GT ./. chr1 216262304 . G . . LowGQX END=216262533 GT ./. chr1 216270374 . A . . LowGQX END=216270607 GT ./. chr1 216348529 . T . . LowGQX END=216348876 GT ./. chr1 216363514 . T . . LowGQX END=216363761 GT ./. chr1 216369844 . A . . LowGQX END=216370116 GT ./. chr1 216371606 . A . . LowGQX END=216371978 GT ./. chr1 216372918 . T . . LowGQX END=216373515 GT ./. chr1 216380564 . A . . LowGQX END=216380825 GT ./. chr1 216390678 . C . . LowGQX END=216390944 GT ./. chr1 216405244 . T . . LowGQX END=216405530 GT ./. chr1 216419876 . A . . LowGQX END=216420620 GT ./. chr1 216424194 . T . . LowGQX END=216424492 GT ./. chr1 216462571 . G . . LowGQX END=216462804 GT ./. chr1 216465466 . A . . LowGQX END=216465764 GT ./. chr1 216495174 . A . . LowGQX END=216495370 GT ./. chr1 216496765 . A . . LowGQX END=216497089 GT ./. chr1 216497459 . T . . LowGQX END=216497746 GT ./. chr1 216498596 . T . . LowGQX END=216498993 GT ./. chr1 216500882 . T . . LowGQX END=216501048 GT ./. chr1 216538244 . A . . LowGQX END=216538479 GT ./. chr1 216591805 . A . . LowGQX END=216592073 GT ./. chr1 216595143 . T . . LowGQX END=216595730 GT ./. chr1 216679907 . T . . LowGQX END=216680007 GT ./. chr1 216680279 . A . . LowGQX END=216680528 GT ./. chr1 216692482 . C . . LowGQX END=216692766 GT ./. chr1 216737559 . A . . LowGQX END=216737744 GT ./. chr1 216741328 . A . . LowGQX END=216741443 GT ./. chr1 216824313 . A . . LowGQX END=216824434 GT ./. chr1 216850416 . A . . LowGQX END=216850836 GT ./. chr1 216880686 . A . . LowGQX END=216880786 GT ./. chr1 216896564 . A . . LowGQX END=216896664 GT ./. chr1 217604485 . T . . LowGQX END=217604710 GT ./. chr1 217622586 . T . . LowGQX END=217622686 GT ./. chr1 217665008 . T . . LowGQX END=217665108 GT ./. chr1 217671608 . C . . LowGQX END=217671768 GT ./. chr1 217688148 . C . . LowGQX END=217688248 GT ./. chr1 217783468 . A . . LowGQX END=217783568 GT ./. chr1 217783653 . G . . LowGQX END=217783753 GT ./. chr1 217784229 . A . . LowGQX END=217784416 GT ./. chr1 217787411 . A . . LowGQX END=217787564 GT ./. chr1 217793123 . A . . LowGQX END=217793844 GT ./. chr1 217804236 . T . . LowGQX END=217804336 GT ./. chr1 217804705 . C . . LowGQX END=217804805 GT ./. chr1 217822219 . T . . LowGQX END=217822319 GT ./. chr1 217824377 . A . . LowGQX END=217824530 GT ./. chr1 217842293 . T . . LowGQX END=217842451 GT ./. chr1 217856598 . A . . LowGQX END=217856758 GT ./. chr1 217915315 . A . . LowGQX END=217915443 GT ./. chr1 217947674 . A . . LowGQX END=217947882 GT ./. chr1 217955514 . A . . LowGQX END=217955667 GT ./. chr1 217975058 . A . . LowGQX END=217975238 GT ./. chr1 218036054 . T . . LowGQX END=218036207 GT ./. chr1 218458657 . A . . LowGQX END=218458847 GT ./. chr1 218475634 . A . . LowGQX END=218475904 GT ./. chr1 218478368 . A . . LowGQX END=218478470 GT ./. chr1 218480771 . A . . LowGQX END=218480977 GT ./. chr1 218504288 . A . . LowGQX END=218504436 GT ./. chr1 218520032 . C . . LowGQX END=218520392 GT ./. chr1 218536668 . A . . LowGQX END=218536768 GT ./. chr1 218578509 . A . . LowGQX END=218578882 GT ./. chr1 218607422 . A . . LowGQX END=218607559 GT ./. chr1 218607678 . A . . LowGQX END=218607793 GT ./. chr1 218609310 . A . . LowGQX END=218609492 GT ./. chr1 218610683 . A . . LowGQX END=218610841 GT ./. chr1 218614504 . C . . LowGQX END=218614707 GT ./. chr1 218683434 . A . . LowGQX END=218683534 GT ./. chr1 218696643 . A . . LowGQX END=218696794 GT ./. chr1 218698748 . G . . LowGQX END=218698871 GT ./. chr1 219347229 . A . . LowGQX END=219347329 GT ./. chr1 219352487 . A . . LowGQX END=219352647 GT ./. chr1 219366422 . A . . LowGQX END=219366596 GT ./. chr1 219383817 . T . . LowGQX END=219383992 GT ./. chr1 219384832 . A . . LowGQX END=219385073 GT ./. chr1 219706379 . C . . LowGQX END=219706479 GT ./. chr1 220088789 . G . . LowGQX END=220089293 GT ./. chr1 220091595 . A . . LowGQX END=220091839 GT ./. chr1 220100359 . G . . LowGQX END=220100520 GT ./. chr1 220101141 . A . . LowGQX END=220101785 GT ./. chr1 220142146 . C . . LowGQX END=220142301 GT ./. chr1 220142383 . C . . LowGQX END=220142483 GT ./. chr1 220145401 . A . . LowGQX END=220145501 GT ./. chr1 220146578 . A . . LowGQX END=220146743 GT ./. chr1 220151886 . A . . LowGQX END=220152064 GT ./. chr1 220152758 . A . . LowGQX END=220152960 GT ./. chr1 220153425 . A . . LowGQX END=220153585 GT ./. chr1 220154096 . A . . LowGQX END=220154202 GT ./. chr1 220154710 . G . . LowGQX END=220154810 GT ./. chr1 220156101 . T . . LowGQX END=220156201 GT ./. chr1 220156529 . A . . LowGQX END=220156743 GT ./. chr1 220157524 . A . . LowGQX END=220157624 GT ./. chr1 220160482 . A . . LowGQX END=220160749 GT ./. chr1 220161930 . A . . LowGQX END=220162168 GT ./. chr1 220170323 . A . . LowGQX END=220170687 GT ./. chr1 220174478 . A . . LowGQX END=220174600 GT ./. chr1 220178588 . A . . LowGQX END=220178748 GT ./. chr1 220179446 . A . . LowGQX END=220179658 GT ./. chr1 220180542 . A . . LowGQX END=220180683 GT ./. chr1 220184286 . A . . LowGQX END=220184401 GT ./. chr1 220191428 . A . . LowGQX END=220191528 GT ./. chr1 220191771 . C . . LowGQX END=220191871 GT ./. chr1 220192330 . A . . LowGQX END=220192430 GT ./. chr1 220193328 . A . . LowGQX END=220193566 GT ./. chr1 220195687 . A . . LowGQX END=220195863 GT ./. chr1 220197604 . A . . LowGQX END=220197801 GT ./. chr1 220198366 . A . . LowGQX END=220198603 GT ./. chr1 220203726 . A . . LowGQX END=220203826 GT ./. chr1 220205727 . A . . LowGQX END=220205907 GT ./. chr1 220206842 . A . . LowGQX END=220207032 GT ./. chr1 220208196 . T . . LowGQX END=220208358 GT ./. chr1 220213520 . C . . LowGQX END=220213620 GT ./. chr1 220219658 . C . . LowGQX END=220219758 GT ./. chr1 220231073 . G . . LowGQX END=220231260 GT ./. chr1 220232184 . C . . LowGQX END=220232337 GT ./. chr1 220233026 . A . . LowGQX END=220233136 GT ./. chr1 220236097 . A . . LowGQX END=220236299 GT ./. chr1 220239387 . G . . LowGQX END=220239487 GT ./. chr1 220240640 . A . . LowGQX END=220240740 GT ./. chr1 220242701 . A . . LowGQX END=220242801 GT ./. chr1 220246190 . A . . LowGQX END=220246302 GT ./. chr1 220247257 . A . . LowGQX END=220247416 GT ./. chr1 220253067 . A . . LowGQX END=220253191 GT ./. chr1 220267557 . C . . LowGQX END=220267828 GT ./. chr1 220269444 . A . . LowGQX END=220269571 GT ./. chr1 220273830 . A . . LowGQX END=220274020 GT ./. chr1 220275439 . T . . LowGQX END=220275622 GT ./. chr1 220275680 . A . . LowGQX END=220275780 GT ./. chr1 220275835 . A . . LowGQX END=220275949 GT ./. chr1 220276025 . A . . LowGQX END=220276125 GT ./. chr1 220276787 . A . . LowGQX END=220276907 GT ./. chr1 220279231 . A . . LowGQX END=220279405 GT ./. chr1 220280399 . A . . LowGQX END=220280499 GT ./. chr1 220284126 . A . . LowGQX END=220284282 GT ./. chr1 220287624 . C . . LowGQX END=220287819 GT ./. chr1 220291145 . C . . LowGQX END=220291305 GT ./. chr1 220291439 . G . . LowGQX END=220291592 GT ./. chr1 220298577 . A . . LowGQX END=220298684 GT ./. chr1 220300030 . A . . LowGQX END=220300189 GT ./. chr1 220307742 . A . . LowGQX END=220307855 GT ./. chr1 220310149 . A . . LowGQX END=220310256 GT ./. chr1 220311258 . A . . LowGQX END=220311388 GT ./. chr1 220312348 . A . . LowGQX END=220312484 GT ./. chr1 220313473 . A . . LowGQX END=220313634 GT ./. chr1 220315143 . A . . LowGQX END=220315293 GT ./. chr1 220316284 . A . . LowGQX END=220316479 GT ./. chr1 220318849 . A . . LowGQX END=220318998 GT ./. chr1 220320833 . A . . LowGQX END=220320980 GT ./. chr1 220324542 . C . . LowGQX END=220324800 GT ./. chr1 220324897 . T . . LowGQX END=220325158 GT ./. chr1 220326476 . C . . LowGQX END=220326800 GT ./. chr1 220327259 . T . . LowGQX END=220327451 GT ./. chr1 220330561 . C . . LowGQX END=220330882 GT ./. chr1 220331093 . A . . LowGQX END=220331270 GT ./. chr1 220332676 . A . . LowGQX END=220332815 GT ./. chr1 220335489 . T . . LowGQX END=220335662 GT ./. chr1 220338024 . G . . LowGQX END=220338193 GT ./. chr1 220340584 . A . . LowGQX END=220341069 GT ./. chr1 220344183 . C . . LowGQX END=220344514 GT ./. chr1 220345180 . C . . LowGQX END=220345443 GT ./. chr1 220345928 . T . . LowGQX END=220346136 GT ./. chr1 220355548 . T . . LowGQX END=220355746 GT ./. chr1 220356055 . C . . LowGQX END=220356325 GT ./. chr1 220357327 . A . . LowGQX END=220357557 GT ./. chr1 220358942 . T . . LowGQX END=220359135 GT ./. chr1 220362994 . A . . LowGQX END=220363161 GT ./. chr1 220363355 . T . . LowGQX END=220363540 GT ./. chr1 220363668 . T . . LowGQX END=220363914 GT ./. chr1 220364359 . A . . LowGQX END=220364678 GT ./. chr1 220366531 . A . . LowGQX END=220366773 GT ./. chr1 220368369 . T . . LowGQX END=220368561 GT ./. chr1 220368589 . G . . LowGQX END=220368771 GT ./. chr1 220369541 . A . . LowGQX END=220369792 GT ./. chr1 220373880 . T . . LowGQX END=220374019 GT ./. chr1 220375567 . T . . LowGQX END=220375768 GT ./. chr1 220379198 . T . . LowGQX END=220379400 GT ./. chr1 220383676 . A . . LowGQX END=220383883 GT ./. chr1 220384092 . C . . LowGQX END=220384396 GT ./. chr1 220384625 . C . . LowGQX END=220384725 GT ./. chr1 220386178 . T . . LowGQX END=220386362 GT ./. chr1 220387147 . T . . LowGQX END=220387373 GT ./. chr1 220406090 . A . . LowGQX END=220406257 GT ./. chr1 220445514 . A . . LowGQX END=220445731 GT ./. chr1 220603218 . T . . LowGQX END=220603378 GT ./. chr1 220607647 . T . . LowGQX END=220607747 GT ./. chr1 220607954 . C . . LowGQX END=220608054 GT ./. chr1 220702081 . C . . LowGQX END=220702241 GT ./. chr1 220752694 . A . . LowGQX END=220752902 GT ./. chr1 220754389 . A . . LowGQX END=220754489 GT ./. chr1 220771588 . A . . LowGQX END=220771801 GT ./. chr1 220773123 . C . . LowGQX END=220773223 GT ./. chr1 220777395 . C . . LowGQX END=220777495 GT ./. chr1 220789209 . A . . LowGQX END=220789360 GT ./. chr1 220791650 . A . . LowGQX END=220791891 GT ./. chr1 220791926 . G . . LowGQX END=220792100 GT ./. chr1 220804375 . A . . LowGQX END=220804479 GT ./. chr1 220805541 . A . . LowGQX END=220805701 GT ./. chr1 220808716 . A . . LowGQX END=220808874 GT ./. chr1 220809173 . A . . LowGQX END=220809371 GT ./. chr1 220823960 . A . . LowGQX END=220824120 GT ./. chr1 220825326 . A . . LowGQX END=220825495 GT ./. chr1 220826440 . C . . LowGQX END=220826697 GT ./. chr1 220831050 . T . . LowGQX END=220831205 GT ./. chr1 220835152 . A . . LowGQX END=220835511 GT ./. chr1 220863732 . G . . LowGQX END=220864062 GT ./. chr1 220869952 . A . . LowGQX END=220870076 GT ./. chr1 220921866 . G . . LowGQX END=220922148 GT ./. chr1 220927665 . C . . LowGQX END=220927765 GT ./. chr1 220928287 . A . . LowGQX END=220928465 GT ./. chr1 220934998 . A . . LowGQX END=220935165 GT ./. chr1 220936250 . A . . LowGQX END=220936430 GT ./. chr1 220953288 . G . . LowGQX END=220953596 GT ./. chr1 220955118 . A . . LowGQX END=220955246 GT ./. chr1 220957223 . A . . LowGQX END=220957323 GT ./. chr1 220960274 . G . . LowGQX END=220960564 GT ./. chr1 220964831 . A . . LowGQX END=220965009 GT ./. chr1 220969983 . A . . LowGQX END=220970173 GT ./. chr1 220971214 . A . . LowGQX END=220971408 GT ./. chr1 220971470 . A . . LowGQX END=220971570 GT ./. chr1 220978375 . T . . LowGQX END=220978475 GT ./. chr1 220978531 . G . . LowGQX END=220978631 GT ./. chr1 220982167 . A . . LowGQX END=220982267 GT ./. chr1 220986632 . A . . LowGQX END=220986763 GT ./. chr1 221053149 . A . . LowGQX END=221053843 GT ./. chr1 221054485 . A . . LowGQX END=221054767 GT ./. chr1 221055375 . A . . LowGQX END=221055742 GT ./. chr1 221057486 . C . . LowGQX END=221058098 GT ./. chr1 221507178 . T . . LowGQX END=221507328 GT ./. chr1 221509205 . C . . LowGQX END=221509430 GT ./. chr1 221875752 . T . . LowGQX END=221876022 GT ./. chr1 221879435 . A . . LowGQX END=221879811 GT ./. chr1 221912274 . A . . LowGQX END=221913089 GT ./. chr1 222695941 . G . . LowGQX END=222696232 GT ./. chr1 222696946 . G . . LowGQX END=222697046 GT ./. chr1 222700302 . A . . LowGQX END=222700402 GT ./. chr1 222705306 . A . . LowGQX END=222705456 GT ./. chr1 222711988 . A . . LowGQX END=222712119 GT ./. chr1 222713350 . A . . LowGQX END=222713686 GT ./. chr1 222715352 . A . . LowGQX END=222715532 GT ./. chr1 222716877 . A . . LowGQX END=222717534 GT ./. chr1 222721064 . A . . LowGQX END=222721389 GT ./. chr1 222732000 . T . . LowGQX END=222732117 GT ./. chr1 222734674 . G . . LowGQX END=222734863 GT ./. chr1 222736513 . A . . LowGQX END=222736683 GT ./. chr1 222737329 . G . . LowGQX END=222737485 GT ./. chr1 222742696 . A . . LowGQX END=222742796 GT ./. chr1 222742850 . A . . LowGQX END=222743013 GT ./. chr1 222743875 . A . . LowGQX END=222744010 GT ./. chr1 222750785 . A . . LowGQX END=222750988 GT ./. chr1 222753049 . A . . LowGQX END=222753217 GT ./. chr1 222757438 . C . . LowGQX END=222757642 GT ./. chr1 222761783 . A . . LowGQX END=222761908 GT ./. chr1 222791411 . G . . LowGQX END=222791588 GT ./. chr1 222794499 . A . . LowGQX END=222794637 GT ./. chr1 222798048 . G . . LowGQX END=222798204 GT ./. chr1 222800915 . A . . LowGQX END=222803734 GT ./. chr1 222805505 . A . . LowGQX END=222805671 GT ./. chr1 222806444 . A . . LowGQX END=222806594 GT ./. chr1 222817817 . A . . LowGQX END=222817929 GT ./. chr1 222818894 . A . . LowGQX END=222819033 GT ./. chr1 222821179 . T . . LowGQX END=222821339 GT ./. chr1 222822079 . T . . LowGQX END=222822232 GT ./. chr1 222823522 . A . . LowGQX END=222823622 GT ./. chr1 222823626 . T . . LowGQX END=222823726 GT ./. chr1 222823965 . A . . LowGQX END=222824065 GT ./. chr1 222824133 . A . . LowGQX END=222824248 GT ./. chr1 222825247 . C . . LowGQX END=222825405 GT ./. chr1 222825568 . A . . LowGQX END=222825677 GT ./. chr1 222826348 . A . . LowGQX END=222826475 GT ./. chr1 222826568 . A . . LowGQX END=222826684 GT ./. chr1 222827563 . A . . LowGQX END=222827663 GT ./. chr1 222827727 . T . . LowGQX END=222827827 GT ./. chr1 222827995 . A . . LowGQX END=222828138 GT ./. chr1 222832062 . A . . LowGQX END=222832168 GT ./. chr1 222832776 . A . . LowGQX END=222832876 GT ./. chr1 222832932 . A . . LowGQX END=222833032 GT ./. chr1 222833060 . T . . LowGQX END=222833160 GT ./. chr1 222833246 . A . . LowGQX END=222833351 GT ./. chr1 222833517 . A . . LowGQX END=222833659 GT ./. chr1 222835383 . T . . LowGQX END=222835483 GT ./. chr1 222835585 . T . . LowGQX END=222835685 GT ./. chr1 222837338 . A . . LowGQX END=222837493 GT ./. chr1 222838202 . A . . LowGQX END=222838302 GT ./. chr1 222838649 . A . . LowGQX END=222838970 GT ./. chr1 222843233 . G . . LowGQX END=222843334 GT ./. chr1 222843473 . A . . LowGQX END=222843595 GT ./. chr1 222846653 . A . . LowGQX END=222846780 GT ./. chr1 222849436 . A . . LowGQX END=222849563 GT ./. chr1 222860270 . A . . LowGQX END=222860381 GT ./. chr1 222860865 . A . . LowGQX END=222861019 GT ./. chr1 222867109 . A . . LowGQX END=222867209 GT ./. chr1 222867529 . T . . LowGQX END=222867629 GT ./. chr1 222876475 . A . . LowGQX END=222876575 GT ./. chr1 222885495 . G . . LowGQX END=222885662 GT ./. chr1 222886055 . G . . LowGQX END=222886155 GT ./. chr1 222889040 . A . . LowGQX END=222889145 GT ./. chr1 222892215 . T . . LowGQX END=222892376 GT ./. chr1 222892603 . A . . LowGQX END=222892704 GT ./. chr1 222895689 . G . . LowGQX END=222895859 GT ./. chr1 222897421 . C . . LowGQX END=222897521 GT ./. chr1 222898790 . A . . LowGQX END=222898900 GT ./. chr1 222900505 . T . . LowGQX END=222900658 GT ./. chr1 222902078 . A . . LowGQX END=222902178 GT ./. chr1 222902953 . T . . LowGQX END=222903053 GT ./. chr1 222903367 . A . . LowGQX END=222903522 GT ./. chr1 222904697 . A . . LowGQX END=222904887 GT ./. chr1 222905964 . C . . LowGQX END=222906064 GT ./. chr1 222919886 . T . . LowGQX END=222920064 GT ./. chr1 222920341 . T . . LowGQX END=222920441 GT ./. chr1 222922303 . T . . LowGQX END=222922422 GT ./. chr1 222922805 . A . . LowGQX END=222922907 GT ./. chr1 222923221 . T . . LowGQX END=222923403 GT ./. chr1 223116115 . T . . LowGQX END=223116726 GT ./. chr1 223152937 . C . . LowGQX END=223153037 GT ./. chr1 223156371 . T . . LowGQX END=223156507 GT ./. chr1 223163916 . G . . LowGQX END=223164142 GT ./. chr1 223164811 . T . . LowGQX END=223165041 GT ./. chr1 223165304 . C . . LowGQX END=223165504 GT ./. chr1 223168176 . A . . LowGQX END=223168376 GT ./. chr1 223175676 . A . . LowGQX END=223179366 GT ./. chr1 223283746 . A . . LowGQX END=223286425 GT ./. chr1 223395499 . A . . LowGQX END=223395599 GT ./. chr1 223396589 . A . . LowGQX END=223396976 GT ./. chr1 223400934 . A . . LowGQX END=223401083 GT ./. chr1 223402537 . A . . LowGQX END=223402737 GT ./. chr1 223408292 . A . . LowGQX END=223408482 GT ./. chr1 223437970 . A . . LowGQX END=223438163 GT ./. chr1 223441842 . A . . LowGQX END=223442020 GT ./. chr1 223465779 . A . . LowGQX END=223465996 GT ./. chr1 223532382 . G . . LowGQX END=223532482 GT ./. chr1 223533489 . A . . LowGQX END=223533654 GT ./. chr1 223536618 . A . . LowGQX END=223536770 GT ./. chr1 223566816 . G . . LowGQX END=223568692 GT ./. chr1 223711374 . T . . LowGQX END=223711482 GT ./. chr1 223712749 . C . . LowGQX END=223712849 GT ./. chr1 223715161 . G . . LowGQX END=223715261 GT ./. chr1 223716449 . A . . LowGQX END=223716549 GT ./. chr1 223717428 . C . . LowGQX END=223717546 GT ./. chr1 223718123 . T . . LowGQX END=223718223 GT ./. chr1 223718577 . A . . LowGQX END=223718677 GT ./. chr1 223722663 . G . . LowGQX END=223722926 GT ./. chr1 223724303 . G . . LowGQX END=223724403 GT ./. chr1 223803438 . T . . LowGQX END=223803848 GT ./. chr1 223805928 . G . . LowGQX END=223806028 GT ./. chr1 223806994 . C . . LowGQX END=223807156 GT ./. chr1 223807881 . A . . LowGQX END=223807981 GT ./. chr1 223810415 . G . . LowGQX END=223810610 GT ./. chr1 223813499 . A . . LowGQX END=223813599 GT ./. chr1 223814690 . C . . LowGQX END=223814860 GT ./. chr1 223815710 . C . . LowGQX END=223815845 GT ./. chr1 223816363 . C . . LowGQX END=223816483 GT ./. chr1 223830464 . T . . LowGQX END=223830564 GT ./. chr1 223842017 . T . . LowGQX END=223842117 GT ./. chr1 223853111 . C . . LowGQX END=223853349 GT ./. chr1 223889422 . G . . LowGQX END=223889582 GT ./. chr1 223900245 . G . . LowGQX END=223900582 GT ./. chr1 223905449 . G . . LowGQX END=223905549 GT ./. chr1 223931800 . A . . LowGQX END=223931923 GT ./. chr1 223933006 . A . . LowGQX END=223933144 GT ./. chr1 223934697 . A . . LowGQX END=223934870 GT ./. chr1 223936673 . A . . LowGQX END=223936833 GT ./. chr1 223938585 . C . . LowGQX END=223938685 GT ./. chr1 223939687 . T . . LowGQX END=223939787 GT ./. chr1 223940496 . A . . LowGQX END=223940661 GT ./. chr1 223943169 . T . . LowGQX END=223943357 GT ./. chr1 223945027 . C . . LowGQX END=223945127 GT ./. chr1 223946912 . A . . LowGQX END=223947186 GT ./. chr1 223949252 . C . . LowGQX END=223949352 GT ./. chr1 223949871 . T . . LowGQX END=223949971 GT ./. chr1 223951831 . G . . LowGQX END=223951931 GT ./. chr1 223954052 . C . . LowGQX END=223954152 GT ./. chr1 223957528 . C . . LowGQX END=223957628 GT ./. chr1 223958139 . T . . LowGQX END=223958239 GT ./. chr1 223959509 . A . . LowGQX END=223959630 GT ./. chr1 223959863 . C . . LowGQX END=223959963 GT ./. chr1 223962498 . T . . LowGQX END=223962598 GT ./. chr1 223968526 . T . . LowGQX END=223968626 GT ./. chr1 223971815 . A . . LowGQX END=223972019 GT ./. chr1 223976708 . A . . LowGQX END=223976879 GT ./. chr1 223980089 . A . . LowGQX END=223980227 GT ./. chr1 223981003 . A . . LowGQX END=223981145 GT ./. chr1 223983515 . A . . LowGQX END=223984295 GT ./. chr1 223985915 . A . . LowGQX END=223986382 GT ./. chr1 223987599 . A . . LowGQX END=223987752 GT ./. chr1 223988400 . A . . LowGQX END=223988560 GT ./. chr1 223989816 . A . . LowGQX END=223990049 GT ./. chr1 223990431 . A . . LowGQX END=223990600 GT ./. chr1 223990971 . A . . LowGQX END=223991157 GT ./. chr1 223991874 . A . . LowGQX END=223992074 GT ./. chr1 223994546 . A . . LowGQX END=223994650 GT ./. chr1 223998124 . A . . LowGQX END=223998224 GT ./. chr1 224001941 . C . . LowGQX END=224002056 GT ./. chr1 224008921 . C . . LowGQX END=224009192 GT ./. chr1 224033259 . A . . LowGQX END=224033419 GT ./. chr1 224102661 . A . . LowGQX END=224102821 GT ./. chr1 224301830 . A . . LowGQX END=224302101 GT ./. chr1 224318172 . A . . LowGQX END=224318286 GT ./. chr1 224321774 . A . . LowGQX END=224321953 GT ./. chr1 224340832 . T . . LowGQX END=224341042 GT ./. chr1 224345052 . A . . LowGQX END=224345451 GT ./. chr1 224363591 . T . . LowGQX END=224363691 GT ./. chr1 224370976 . C . . LowGQX END=224371187 GT ./. chr1 224377277 . A . . LowGQX END=224378024 GT ./. chr1 224380032 . A . . LowGQX END=224380212 GT ./. chr1 224415301 . G . . LowGQX END=224415401 GT ./. chr1 224418914 . A . . LowGQX END=224419014 GT ./. chr1 224420898 . T . . LowGQX END=224420998 GT ./. chr1 224424197 . T . . LowGQX END=224424297 GT ./. chr1 224437858 . G . . LowGQX END=224438023 GT ./. chr1 224444666 . C . . LowGQX END=224444844 GT ./. chr1 224455734 . A . . LowGQX END=224455838 GT ./. chr1 224463039 . A . . LowGQX END=224463163 GT ./. chr1 224468807 . T . . LowGQX END=224468907 GT ./. chr1 224473726 . A . . LowGQX END=224473835 GT ./. chr1 224475475 . A . . LowGQX END=224475698 GT ./. chr1 224477184 . A . . LowGQX END=224477438 GT ./. chr1 224481967 . A . . LowGQX END=224482116 GT ./. chr1 224484201 . A . . LowGQX END=224484323 GT ./. chr1 224488262 . A . . LowGQX END=224488368 GT ./. chr1 224489331 . C . . LowGQX END=224489483 GT ./. chr1 224490580 . T . . LowGQX END=224490733 GT ./. chr1 224491423 . A . . LowGQX END=224491562 GT ./. chr1 224492427 . T . . LowGQX END=224492527 GT ./. chr1 224492734 . A . . LowGQX END=224492871 GT ./. chr1 224495691 . A . . LowGQX END=224495968 GT ./. chr1 224499481 . C . . LowGQX END=224499581 GT ./. chr1 224500704 . T . . LowGQX END=224500858 GT ./. chr1 224505394 . A . . LowGQX END=224505498 GT ./. chr1 224505557 . T . . LowGQX END=224505657 GT ./. chr1 224514080 . T . . LowGQX END=224514180 GT ./. chr1 224517752 . C . . LowGQX END=224517852 GT ./. chr1 224544612 . C . . LowGQX END=224544712 GT ./. chr1 224548125 . G . . LowGQX END=224548282 GT ./. chr1 224553579 . A . . LowGQX END=224553696 GT ./. chr1 224558983 . A . . LowGQX END=224559128 GT ./. chr1 224563461 . G . . LowGQX END=224563561 GT ./. chr1 224566732 . G . . LowGQX END=224566832 GT ./. chr1 224577440 . G . . LowGQX END=224577600 GT ./. chr1 224581528 . A . . LowGQX END=224581718 GT ./. chr1 224585757 . C . . LowGQX END=224585931 GT ./. chr1 224586207 . A . . LowGQX END=224586307 GT ./. chr1 224586558 . A . . LowGQX END=224586739 GT ./. chr1 224588650 . A . . LowGQX END=224588774 GT ./. chr1 224592130 . A . . LowGQX END=224592275 GT ./. chr1 224599127 . A . . LowGQX END=224599270 GT ./. chr1 224600982 . T . . LowGQX END=224601082 GT ./. chr1 224605960 . A . . LowGQX END=224606121 GT ./. chr1 224607218 . A . . LowGQX END=224607320 GT ./. chr1 224612218 . A . . LowGQX END=224612422 GT ./. chr1 224619134 . C . . LowGQX END=224619286 GT ./. chr1 224619382 . A . . LowGQX END=224619484 GT ./. chr1 224621385 . C . . LowGQX END=224621808 GT ./. chr1 224804868 . C . . LowGQX END=224804968 GT ./. chr1 224868645 . T . . LowGQX END=224868745 GT ./. chr1 224872472 . C . . LowGQX END=224872572 GT ./. chr1 224918162 . A . . LowGQX END=224918279 GT ./. chr1 224922263 . A . . LowGQX END=224922411 GT ./. chr1 224926939 . G . . LowGQX END=224927095 GT ./. chr1 225083964 . A . . LowGQX END=225084068 GT ./. chr1 225110979 . T . . LowGQX END=225111079 GT ./. chr1 225117218 . C . . LowGQX END=225117538 GT ./. chr1 225140391 . G . . LowGQX END=225140491 GT ./. chr1 225142659 . A . . LowGQX END=225142839 GT ./. chr1 225147853 . A . . LowGQX END=225148007 GT ./. chr1 225152179 . A . . LowGQX END=225152314 GT ./. chr1 225155131 . A . . LowGQX END=225155288 GT ./. chr1 225155350 . T . . LowGQX END=225155450 GT ./. chr1 225156460 . G . . LowGQX END=225156620 GT ./. chr1 225161774 . G . . LowGQX END=225161874 GT ./. chr1 225190444 . T . . LowGQX END=225190630 GT ./. chr1 225195114 . G . . LowGQX END=225195247 GT ./. chr1 225211316 . G . . LowGQX END=225211572 GT ./. chr1 225226345 . T . . LowGQX END=225226526 GT ./. chr1 225230536 . G . . LowGQX END=225230817 GT ./. chr1 225231365 . G . . LowGQX END=225231519 GT ./. chr1 225231527 . G . . LowGQX END=225231687 GT ./. chr1 225237911 . G . . LowGQX END=225238101 GT ./. chr1 225239152 . G . . LowGQX END=225239498 GT ./. chr1 225266898 . G . . LowGQX END=225267258 GT ./. chr1 225268080 . G . . LowGQX END=225268451 GT ./. chr1 225270250 . G . . LowGQX END=225270450 GT ./. chr1 225273245 . G . . LowGQX END=225273492 GT ./. chr1 225284819 . G . . LowGQX END=225284942 GT ./. chr1 225288414 . G . . LowGQX END=225288604 GT ./. chr1 225305385 . G . . LowGQX END=225305491 GT ./. chr1 225305582 . G . . LowGQX END=225305868 GT ./. chr1 225306909 . A . . LowGQX END=225307009 GT ./. chr1 225311223 . T . . LowGQX END=225311323 GT ./. chr1 225328432 . G . . LowGQX END=225328724 GT ./. chr1 225332098 . G . . LowGQX END=225332331 GT ./. chr1 225333005 . A . . LowGQX END=225333105 GT ./. chr1 225334805 . G . . LowGQX END=225334958 GT ./. chr1 225339575 . T . . LowGQX END=225339776 GT ./. chr1 225340398 . G . . LowGQX END=225340598 GT ./. chr1 225341440 . A . . LowGQX END=225341540 GT ./. chr1 225346986 . C . . LowGQX END=225347188 GT ./. chr1 225355636 . T . . LowGQX END=225355790 GT ./. chr1 225372952 . A . . LowGQX END=225373128 GT ./. chr1 225380397 . G . . LowGQX END=225380614 GT ./. chr1 225391880 . T . . LowGQX END=225392034 GT ./. chr1 225393672 . G . . LowGQX END=225393882 GT ./. chr1 225394669 . G . . LowGQX END=225394923 GT ./. chr1 225418764 . T . . LowGQX END=225418864 GT ./. chr1 225428294 . G . . LowGQX END=225428525 GT ./. chr1 225438334 . A . . LowGQX END=225438434 GT ./. chr1 225439952 . A . . LowGQX END=225440120 GT ./. chr1 225445631 . A . . LowGQX END=225445821 GT ./. chr1 225446782 . T . . LowGQX END=225446956 GT ./. chr1 225451881 . T . . LowGQX END=225451981 GT ./. chr1 225452883 . G . . LowGQX END=225453083 GT ./. chr1 225454342 . G . . LowGQX END=225454512 GT ./. chr1 225458436 . G . . LowGQX END=225458569 GT ./. chr1 225459607 . G . . LowGQX END=225459797 GT ./. chr1 225460656 . G . . LowGQX END=225460828 GT ./. chr1 225463616 . A . . LowGQX END=225463784 GT ./. chr1 225465109 . T . . LowGQX END=225465209 GT ./. chr1 225477586 . G . . LowGQX END=225477785 GT ./. chr1 225488540 . T . . LowGQX END=225488733 GT ./. chr1 225490857 . G . . LowGQX END=225491050 GT ./. chr1 225492609 . G . . LowGQX END=225492809 GT ./. chr1 225495112 . T . . LowGQX END=225495272 GT ./. chr1 225495936 . G . . LowGQX END=225496113 GT ./. chr1 225506282 . C . . LowGQX END=225506382 GT ./. chr1 225510365 . G . . LowGQX END=225510526 GT ./. chr1 225511923 . G . . LowGQX END=225512056 GT ./. chr1 225512437 . A . . LowGQX END=225512537 GT ./. chr1 225519138 . G . . LowGQX END=225519328 GT ./. chr1 225520992 . G . . LowGQX END=225521209 GT ./. chr1 225524967 . G . . LowGQX END=225525199 GT ./. chr1 225525762 . G . . LowGQX END=225525885 GT ./. chr1 225525926 . T . . LowGQX END=225526026 GT ./. chr1 225528158 . G . . LowGQX END=225528404 GT ./. chr1 225533663 . G . . LowGQX END=225534083 GT ./. chr1 225534147 . T . . LowGQX END=225534357 GT ./. chr1 225539348 . G . . LowGQX END=225539586 GT ./. chr1 225541444 . G . . LowGQX END=225541598 GT ./. chr1 225541876 . A . . LowGQX END=225541976 GT ./. chr1 225545470 . G . . LowGQX END=225545573 GT ./. chr1 225546197 . G . . LowGQX END=225546387 GT ./. chr1 225548382 . G . . LowGQX END=225548594 GT ./. chr1 225552493 . G . . LowGQX END=225552597 GT ./. chr1 225555506 . G . . LowGQX END=225555735 GT ./. chr1 225562389 . G . . LowGQX END=225562580 GT ./. chr1 225564957 . G . . LowGQX END=225565139 GT ./. chr1 225567860 . G . . LowGQX END=225568025 GT ./. chr1 225569074 . T . . LowGQX END=225569282 GT ./. chr1 225576080 . G . . LowGQX END=225576194 GT ./. chr1 225577435 . G . . LowGQX END=225577576 GT ./. chr1 225579992 . G . . LowGQX END=225580154 GT ./. chr1 225586221 . G . . LowGQX END=225586369 GT ./. chr1 225586755 . G . . LowGQX END=225586972 GT ./. chr1 225590954 . C . . LowGQX END=225591217 GT ./. chr1 225592055 . A . . LowGQX END=225592460 GT ./. chr1 225594312 . A . . LowGQX END=225594586 GT ./. chr1 225597942 . A . . LowGQX END=225598170 GT ./. chr1 225598988 . G . . LowGQX END=225599194 GT ./. chr1 225600105 . C . . LowGQX END=225600399 GT ./. chr1 225601575 . C . . LowGQX END=225601924 GT ./. chr1 225602929 . G . . LowGQX END=225603086 GT ./. chr1 225605635 . T . . LowGQX END=225605934 GT ./. chr1 225606914 . C . . LowGQX END=225607206 GT ./. chr1 225607366 . C . . LowGQX END=225607552 GT ./. chr1 225609728 . T . . LowGQX END=225610031 GT ./. chr1 225611562 . T . . LowGQX END=225611819 GT ./. chr1 225685446 . T . . LowGQX END=225685546 GT ./. chr1 225685977 . T . . LowGQX END=225686128 GT ./. chr1 225688684 . G . . LowGQX END=225688784 GT ./. chr1 225692675 . G . . LowGQX END=225692775 GT ./. chr1 225695581 . T . . LowGQX END=225695737 GT ./. chr1 225699488 . G . . LowGQX END=225699588 GT ./. chr1 225700338 . A . . LowGQX END=225700438 GT ./. chr1 225700571 . A . . LowGQX END=225700721 GT ./. chr1 225702226 . C . . LowGQX END=225702666 GT ./. chr1 225704896 . A . . LowGQX END=225705693 GT ./. chr1 225706898 . A . . LowGQX END=225707270 GT ./. chr1 225718249 . A . . LowGQX END=225718349 GT ./. chr1 225723187 . A . . LowGQX END=225723287 GT ./. chr1 225742606 . A . . LowGQX END=225742788 GT ./. chr1 225754929 . A . . LowGQX END=225755119 GT ./. chr1 225840281 . G . . LowGQX END=225840441 GT ./. chr1 225965629 . C . . LowGQX END=225965729 GT ./. chr1 225970987 . G . . LowGQX END=225971087 GT ./. chr1 225974512 . T . . LowGQX END=225974672 GT ./. chr1 225976716 . A . . LowGQX END=225976816 GT ./. chr1 225976940 . A . . LowGQX END=225977064 GT ./. chr1 226016380 . C . . LowGQX END=226016665 GT ./. chr1 226019429 . T . . LowGQX END=226019712 GT ./. chr1 226026304 . C . . LowGQX END=226026634 GT ./. chr1 226026867 . A . . LowGQX END=226027099 GT ./. chr1 226027479 . C . . LowGQX END=226027790 GT ./. chr1 226030016 . C . . LowGQX END=226030227 GT ./. chr1 226032148 . A . . LowGQX END=226032376 GT ./. chr1 226032796 . G . . LowGQX END=226033100 GT ./. chr1 226034739 . C . . LowGQX END=226034917 GT ./. chr1 226036175 . C . . LowGQX END=226036275 GT ./. chr1 226036596 . A . . LowGQX END=226036716 GT ./. chr1 226037611 . A . . LowGQX END=226037783 GT ./. chr1 226040363 . A . . LowGQX END=226040473 GT ./. chr1 226041328 . A . . LowGQX END=226041495 GT ./. chr1 226043561 . C . . LowGQX END=226043661 GT ./. chr1 226044291 . G . . LowGQX END=226044447 GT ./. chr1 226044559 . G . . LowGQX END=226044720 GT ./. chr1 226046873 . G . . LowGQX END=226047052 GT ./. chr1 226048555 . C . . LowGQX END=226048700 GT ./. chr1 226049916 . A . . LowGQX END=226050054 GT ./. chr1 226050153 . A . . LowGQX END=226050281 GT ./. chr1 226050462 . A . . LowGQX END=226050562 GT ./. chr1 226053583 . C . . LowGQX END=226053683 GT ./. chr1 226054265 . C . . LowGQX END=226054385 GT ./. chr1 226054788 . T . . LowGQX END=226054888 GT ./. chr1 226055586 . A . . LowGQX END=226055733 GT ./. chr1 226058745 . C . . LowGQX END=226058845 GT ./. chr1 226059671 . G . . LowGQX END=226059771 GT ./. chr1 226061978 . A . . LowGQX END=226062078 GT ./. chr1 226065093 . A . . LowGQX END=226065283 GT ./. chr1 226074425 . G . . LowGQX END=226074793 GT ./. chr1 226075097 . A . . LowGQX END=226075341 GT ./. chr1 226075458 . C . . LowGQX END=226075735 GT ./. chr1 226076500 . G . . LowGQX END=226076769 GT ./. chr1 226108153 . C . . LowGQX END=226108372 GT ./. chr1 226108906 . A . . LowGQX END=226109074 GT ./. chr1 226109249 . G . . LowGQX END=226109349 GT ./. chr1 226109556 . A . . LowGQX END=226109782 GT ./. chr1 226109902 . A . . LowGQX END=226110086 GT ./. chr1 226111387 . C . . LowGQX END=226111487 GT ./. chr1 226111668 . C . . LowGQX END=226111828 GT ./. chr1 226125090 . C . . LowGQX END=226125556 GT ./. chr1 226127010 . C . . LowGQX END=226127352 GT ./. chr1 226127405 . C . . LowGQX END=226127754 GT ./. chr1 226128540 . C . . LowGQX END=226128892 GT ./. chr1 226173001 . A . . LowGQX END=226173227 GT ./. chr1 226175595 . A . . LowGQX END=226176092 GT ./. chr1 226178942 . A . . LowGQX END=226179067 GT ./. chr1 226180097 . A . . LowGQX END=226180271 GT ./. chr1 226180590 . A . . LowGQX END=226180706 GT ./. chr1 226182965 . A . . LowGQX END=226183087 GT ./. chr1 226186892 . A . . LowGQX END=226187016 GT ./. chr1 226252051 . C . . LowGQX END=226252183 GT ./. chr1 226253355 . A . . LowGQX END=226253601 GT ./. chr1 226259010 . G . . LowGQX END=226259183 GT ./. chr1 226334309 . T . . LowGQX END=226334525 GT ./. chr1 226340034 . A . . LowGQX END=226340323 GT ./. chr1 226342346 . A . . LowGQX END=226342537 GT ./. chr1 226346883 . A . . LowGQX END=226347062 GT ./. chr1 226349200 . A . . LowGQX END=226349393 GT ./. chr1 226352488 . A . . LowGQX END=226352633 GT ./. chr1 226353558 . A . . LowGQX END=226353704 GT ./. chr1 226374078 . T . . LowGQX END=226374388 GT ./. chr1 226411370 . G . . LowGQX END=226411778 GT ./. chr1 226413183 . G . . LowGQX END=226413516 GT ./. chr1 226420200 . A . . LowGQX END=226420310 GT ./. chr1 226420792 . A . . LowGQX END=226420897 GT ./. chr1 226421043 . A . . LowGQX END=226421227 GT ./. chr1 226426670 . A . . LowGQX END=226426840 GT ./. chr1 226438477 . T . . LowGQX END=226438630 GT ./. chr1 226453232 . A . . LowGQX END=226453392 GT ./. chr1 226453912 . A . . LowGQX END=226454036 GT ./. chr1 226455656 . A . . LowGQX END=226455794 GT ./. chr1 226465474 . A . . LowGQX END=226465636 GT ./. chr1 226474032 . A . . LowGQX END=226474162 GT ./. chr1 226475332 . A . . LowGQX END=226475543 GT ./. chr1 226483541 . A . . LowGQX END=226483650 GT ./. chr1 226485418 . A . . LowGQX END=226485518 GT ./. chr1 226488841 . C . . LowGQX END=226488941 GT ./. chr1 226496808 . A . . LowGQX END=226497291 GT ./. chr1 226497327 . A . . LowGQX END=226497571 GT ./. chr1 226549110 . C . . LowGQX END=226549294 GT ./. chr1 226549619 . T . . LowGQX END=226549836 GT ./. chr1 226550749 . G . . LowGQX END=226550913 GT ./. chr1 226551593 . T . . LowGQX END=226551823 GT ./. chr1 226552652 . G . . LowGQX END=226552907 GT ./. chr1 226553604 . G . . LowGQX END=226553805 GT ./. chr1 226555130 . T . . LowGQX END=226555361 GT ./. chr1 226555849 . G . . LowGQX END=226556074 GT ./. chr1 226558084 . T . . LowGQX END=226558270 GT ./. chr1 226561876 . A . . LowGQX END=226562107 GT ./. chr1 226564758 . T . . LowGQX END=226565056 GT ./. chr1 226566792 . G . . LowGQX END=226567027 GT ./. chr1 226567223 . G . . LowGQX END=226567394 GT ./. chr1 226567572 . C . . LowGQX END=226567917 GT ./. chr1 226568718 . C . . LowGQX END=226568961 GT ./. chr1 226570686 . G . . LowGQX END=226570936 GT ./. chr1 226573154 . G . . LowGQX END=226573433 GT ./. chr1 226573976 . C . . LowGQX END=226574195 GT ./. chr1 226576306 . G . . LowGQX END=226576508 GT ./. chr1 226578060 . C . . LowGQX END=226578377 GT ./. chr1 226579849 . T . . LowGQX END=226580067 GT ./. chr1 226580560 . C . . LowGQX END=226580711 GT ./. chr1 226589732 . A . . LowGQX END=226590132 GT ./. chr1 226595460 . T . . LowGQX END=226595682 GT ./. chr1 226736560 . G . . LowGQX END=226736874 GT ./. chr1 226784501 . A . . LowGQX END=226784701 GT ./. chr1 226785057 . T . . LowGQX END=226785157 GT ./. chr1 226788322 . C . . LowGQX END=226788422 GT ./. chr1 226789648 . T . . LowGQX END=226789773 GT ./. chr1 226822370 . G . . LowGQX END=226822590 GT ./. chr1 226825366 . A . . LowGQX END=226825466 GT ./. chr1 226827256 . A . . LowGQX END=226827362 GT ./. chr1 226829620 . A . . LowGQX END=226829829 GT ./. chr1 226834866 . A . . LowGQX END=226835084 GT ./. chr1 226836371 . A . . LowGQX END=226836475 GT ./. chr1 226895565 . A . . LowGQX END=226895665 GT ./. chr1 226923226 . A . . LowGQX END=226925165 GT ./. chr1 227068336 . C . . LowGQX END=227068436 GT ./. chr1 227069549 . A . . LowGQX END=227069801 GT ./. chr1 227071355 . T . . LowGQX END=227071672 GT ./. chr1 227073188 . C . . LowGQX END=227073432 GT ./. chr1 227075741 . A . . LowGQX END=227075911 GT ./. chr1 227076479 . C . . LowGQX END=227076802 GT ./. chr1 227077685 . T . . LowGQX END=227077886 GT ./. chr1 227078928 . G . . LowGQX END=227079114 GT ./. chr1 227079393 . T . . LowGQX END=227079598 GT ./. chr1 227081657 . T . . LowGQX END=227081878 GT ./. chr1 227083074 . C . . LowGQX END=227083332 GT ./. chr1 227149036 . A . . LowGQX END=227149315 GT ./. chr1 227152650 . G . . LowGQX END=227153163 GT ./. chr1 227153321 . G . . LowGQX END=227153490 GT ./. chr1 227165099 . G . . LowGQX END=227165276 GT ./. chr1 227169677 . C . . LowGQX END=227169902 GT ./. chr1 227170328 . G . . LowGQX END=227170516 GT ./. chr1 227170544 . G . . LowGQX END=227170787 GT ./. chr1 227171202 . G . . LowGQX END=227171386 GT ./. chr1 227171411 . G . . LowGQX END=227171607 GT ./. chr1 227171744 . G . . LowGQX END=227171988 GT ./. chr1 227172198 . G . . LowGQX END=227172408 GT ./. chr1 227172526 . C . . LowGQX END=227172694 GT ./. chr1 227172904 . G . . LowGQX END=227173093 GT ./. chr1 227174103 . G . . LowGQX END=227174490 GT ./. chr1 227181927 . T . . LowGQX END=227182103 GT ./. chr1 227182522 . A . . LowGQX END=227182684 GT ./. chr1 227192618 . T . . LowGQX END=227192815 GT ./. chr1 227198578 . C . . LowGQX END=227198765 GT ./. chr1 227203779 . A . . LowGQX END=227203949 GT ./. chr1 227204626 . A . . LowGQX END=227204754 GT ./. chr1 227210892 . T . . LowGQX END=227211057 GT ./. chr1 227213704 . G . . LowGQX END=227213856 GT ./. chr1 227216356 . A . . LowGQX END=227216954 GT ./. chr1 227218037 . A . . LowGQX END=227218191 GT ./. chr1 227218997 . A . . LowGQX END=227219218 GT ./. chr1 227221026 . C . . LowGQX END=227221126 GT ./. chr1 227222354 . A . . LowGQX END=227222498 GT ./. chr1 227223130 . A . . LowGQX END=227223311 GT ./. chr1 227227780 . T . . LowGQX END=227227940 GT ./. chr1 227235620 . T . . LowGQX END=227235720 GT ./. chr1 227239581 . C . . LowGQX END=227239687 GT ./. chr1 227247043 . G . . LowGQX END=227247143 GT ./. chr1 227256329 . C . . LowGQX END=227256429 GT ./. chr1 227257467 . T . . LowGQX END=227257567 GT ./. chr1 227259905 . A . . LowGQX END=227260005 GT ./. chr1 227261563 . A . . LowGQX END=227261753 GT ./. chr1 227261958 . A . . LowGQX END=227262068 GT ./. chr1 227268542 . T . . LowGQX END=227268721 GT ./. chr1 227279585 . A . . LowGQX END=227279695 GT ./. chr1 227288691 . A . . LowGQX END=227288943 GT ./. chr1 227300011 . A . . LowGQX END=227300126 GT ./. chr1 227300370 . A . . LowGQX END=227300617 GT ./. chr1 227307503 . A . . LowGQX END=227307641 GT ./. chr1 227316808 . A . . LowGQX END=227316978 GT ./. chr1 227327275 . A . . LowGQX END=227327446 GT ./. chr1 227330584 . G . . LowGQX END=227330736 GT ./. chr1 227333188 . A . . LowGQX END=227333441 GT ./. chr1 227335058 . A . . LowGQX END=227335263 GT ./. chr1 227348182 . A . . LowGQX END=227348341 GT ./. chr1 227381485 . A . . LowGQX END=227381638 GT ./. chr1 227387196 . A . . LowGQX END=227387356 GT ./. chr1 227400769 . A . . LowGQX END=227400929 GT ./. chr1 227441703 . C . . LowGQX END=227441861 GT ./. chr1 227504684 . T . . LowGQX END=227504886 GT ./. chr1 227751305 . T . . LowGQX END=227751461 GT ./. chr1 227770211 . G . . LowGQX END=227770311 GT ./. chr1 227834194 . C . . LowGQX END=227834372 GT ./. chr1 227838686 . A . . LowGQX END=227838786 GT ./. chr1 227842035 . A . . LowGQX END=227843532 GT ./. chr1 227920091 . T . . LowGQX END=227920380 GT ./. chr1 227920580 . A . . LowGQX END=227920731 GT ./. chr1 227921043 . G . . LowGQX END=227921453 GT ./. chr1 227921606 . A . . LowGQX END=227921736 GT ./. chr1 227922350 . A . . LowGQX END=227922520 GT ./. chr1 227922711 . A . . LowGQX END=227923203 GT ./. chr1 227935391 . A . . LowGQX END=227935937 GT ./. chr1 227946694 . A . . LowGQX END=227947189 GT ./. chr1 227954658 . A . . LowGQX END=227954787 GT ./. chr1 227963486 . G . . LowGQX END=227963586 GT ./. chr1 227968226 . A . . LowGQX END=227968377 GT ./. chr1 228003416 . T . . LowGQX END=228003568 GT ./. chr1 228003789 . A . . LowGQX END=228003956 GT ./. chr1 228004908 . A . . LowGQX END=228005184 GT ./. chr1 228033169 . A . . LowGQX END=228033316 GT ./. chr1 228033653 . A . . LowGQX END=228033912 GT ./. chr1 228109217 . A . . LowGQX END=228109704 GT ./. chr1 228111837 . G . . LowGQX END=228112104 GT ./. chr1 228112962 . A . . LowGQX END=228113223 GT ./. chr1 228135441 . C . . LowGQX END=228135592 GT ./. chr1 228194758 . C . . LowGQX END=228194916 GT ./. chr1 228210366 . A . . LowGQX END=228210612 GT ./. chr1 228238355 . A . . LowGQX END=228238625 GT ./. chr1 228246685 . A . . LowGQX END=228247169 GT ./. chr1 228247902 . G . . LowGQX END=228248006 GT ./. chr1 228284814 . G . . LowGQX END=228284966 GT ./. chr1 228285041 . A . . LowGQX END=228285156 GT ./. chr1 228285240 . T . . LowGQX END=228285419 GT ./. chr1 228285551 . A . . LowGQX END=228285717 GT ./. chr1 228288830 . C . . LowGQX END=228288958 GT ./. chr1 228289038 . A . . LowGQX END=228289177 GT ./. chr1 228289774 . G . . LowGQX END=228289874 GT ./. chr1 228289998 . G . . LowGQX END=228290098 GT ./. chr1 228290171 . G . . LowGQX END=228290417 GT ./. chr1 228290598 . A . . LowGQX END=228290753 GT ./. chr1 228290832 . C . . LowGQX END=228290905 GT ./. chr1 228290906 . C . . LowGQX END=228290932;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 228294459 . G . . LowGQX END=228294622 GT ./. chr1 228295297 . T . . LowGQX END=228295637 GT ./. chr1 228295677 . C . . LowGQX END=228295786 GT ./. chr1 228295899 . G . . LowGQX END=228295999 GT ./. chr1 228327924 . A . . LowGQX END=228328084 GT ./. chr1 228329335 . A . . LowGQX END=228329531 GT ./. chr1 228333193 . C . . LowGQX END=228333351 GT ./. chr1 228333698 . C . . LowGQX END=228333798 GT ./. chr1 228334541 . A . . LowGQX END=228334642 GT ./. chr1 228335105 . A . . LowGQX END=228335248 GT ./. chr1 228335309 . T . . LowGQX END=228335409 GT ./. chr1 228335912 . C . . LowGQX END=228336012 GT ./. chr1 228336070 . A . . LowGQX END=228336241 GT ./. chr1 228336364 . A . . LowGQX END=228336554 GT ./. chr1 228345409 . G . . LowGQX END=228346831 GT ./. chr1 228351817 . A . . LowGQX END=228352151 GT ./. chr1 228353513 . C . . LowGQX END=228353861 GT ./. chr1 228362391 . A . . LowGQX END=228362733 GT ./. chr1 228362821 . A . . LowGQX END=228363217 GT ./. chr1 228391753 . C . . LowGQX END=228391857 GT ./. chr1 228393010 . A . . LowGQX END=228393170 GT ./. chr1 228399484 . C . . LowGQX END=228400609 GT ./. chr1 228401082 . C . . LowGQX END=228401412 GT ./. chr1 228401864 . C . . LowGQX END=228402136 GT ./. chr1 228402490 . G . . LowGQX END=228402800 GT ./. chr1 228403263 . G . . LowGQX END=228403531 GT ./. chr1 228404121 . G . . LowGQX END=228404404 GT ./. chr1 228404713 . G . . LowGQX END=228404990 GT ./. chr1 228412159 . G . . LowGQX END=228412436 GT ./. chr1 228430883 . G . . LowGQX END=228431160 GT ./. chr1 228431996 . G . . LowGQX END=228432273 GT ./. chr1 228433113 . G . . LowGQX END=228433390 GT ./. chr1 228434228 . G . . LowGQX END=228434505 GT ./. chr1 228437665 . G . . LowGQX END=228437942 GT ./. chr1 228444301 . C . . LowGQX END=228444628 GT ./. chr1 228447201 . G . . LowGQX END=228447478 GT ./. chr1 228451816 . G . . LowGQX END=228452093 GT ./. chr1 228456032 . A . . LowGQX END=228456570 GT ./. chr1 228459625 . G . . LowGQX END=228459923 GT ./. chr1 228460972 . G . . LowGQX END=228461249 GT ./. chr1 228461470 . G . . LowGQX END=228461750 GT ./. chr1 228461878 . G . . LowGQX END=228462146 GT ./. chr1 228462272 . G . . LowGQX END=228462543 GT ./. chr1 228463460 . G . . LowGQX END=228463728 GT ./. chr1 228464150 . G . . LowGQX END=228464418 GT ./. chr1 228464630 . G . . LowGQX END=228464757 GT ./. chr1 228464860 . G . . LowGQX END=228465015 GT ./. chr1 228465206 . G . . LowGQX END=228465368 GT ./. chr1 228465447 . G . . LowGQX END=228465560 GT ./. chr1 228466389 . G . . LowGQX END=228466657 GT ./. chr1 228466875 . G . . LowGQX END=228467146 GT ./. chr1 228467521 . G . . LowGQX END=228467564 GT ./. chr1 228467565 . G . . LowGQX END=228467618;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 228467619 . T . . LowGQX END=228467789 GT ./. chr1 228467879 . G . . LowGQX END=228468147 GT ./. chr1 228468230 . G . . LowGQX END=228468498 GT ./. chr1 228469633 . G . . LowGQX END=228469907 GT ./. chr1 228470718 . G . . LowGQX END=228470986 GT ./. chr1 228471203 . G . . LowGQX END=228471535 GT ./. chr1 228473778 . G . . LowGQX END=228474052 GT ./. chr1 228474473 . G . . LowGQX END=228474741 GT ./. chr1 228475394 . G . . LowGQX END=228475662 GT ./. chr1 228475761 . G . . LowGQX END=228476026 GT ./. chr1 228476255 . T . . LowGQX END=228476655 GT ./. chr1 228479528 . T . . LowGQX END=228479928 GT ./. chr1 228480223 . G . . LowGQX END=228480493 GT ./. chr1 228481053 . G . . LowGQX END=228481318 GT ./. chr1 228481842 . G . . LowGQX END=228482075 GT ./. chr1 228482076 . G . . LowGQX END=228482078;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 228482079 . C T 5.06 LowGQX;LowGQ DP=1;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;MQ=60;MQ0=0;QD=5.06;SB=-0.01;TI=NM_052843,NM_001098623;GI=OBSCN,OBSCN;FC=Synonymous_C3786C,Synonymous_C3786C;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,1:1:3.01:33,3,0:60:3:1.000 chr1 228482080 . G . . LowGQX END=228482084;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 228482085 . G . . LowGQX END=228482092;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:5:9:60 chr1 228482093 . C . . PASS END=228482101;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:6:12:60 chr1 228482102 . C . . PASS END=228482113;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:9:15:60 chr1 228482114 . G . . LowGQX . GT:DP:GQX:MQ 0/0:9:1:60 chr1 228482115 . G . . PASS END=228482119;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:9:12:60 chr1 228482120 . A . . PASS END=228482122;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:9:18:60 chr1 228482480 . G . . PASS END=228482528;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:27:51:60 chr1 228482529 . A . . PASS . GT:DP:GQX:MQ 0/0:33:69:60 chr1 228482530 . A . . PASS . GT:DP:GQX:MQ 0/0:32:45:60 chr1 228482531 . G . . PASS END=228482553;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:32:63:59 chr1 228482554 . T . . PASS END=228482566;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:27:51:59 chr1 228482567 . G . . PASS END=228482568;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:27:48:59 chr1 228482569 rs56122236 G A 295.72 PASS BaseQRankSum=2.580;DP=28;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;MQ=59;MQ0=0;MQRankSum=0.461;QD=10.56;ReadPosRankSum=1.428;SB=-175.49;TI=NM_052843,NM_001098623;GI=OBSCN,OBSCN;FC=Synonymous_A3828A,Synonymous_A3828A;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:15,13:28:99:326,0,341:59:99:0.464 chr1 228482570 . G . . PASS END=228482573;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:27:51:59 chr1 228482574 . C . . PASS END=228482578;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:26:42:60 chr1 228482579 . G . . PASS END=228482602;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:28:54:60 chr1 228482603 . C . . PASS . GT:DP:GQX:MQ 0/0:32:36:60 chr1 228482604 . T . . PASS END=228482649;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:30:54:60 chr1 228482650 . T . . PASS END=228482676;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:23:39:60 chr1 228482677 . G . . PASS END=228482679;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:21:36:60 chr1 228482680 . A . . PASS END=228482688;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:11:21:60 chr1 228482689 . G . . PASS END=228482694;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:8:18:60 chr1 228482695 . C . . PASS END=228482696;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:8:12:60 chr1 228482697 . C . . PASS END=228482702;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:6:15:60 chr1 228482703 . T . . PASS END=228482710;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:5:12:60 chr1 228482711 . C . . LowGQX . GT:DP:GQX:MQ 0/0:5:9:60 chr1 228482712 . A . . PASS . GT:DP:GQX:MQ 0/0:5:12:60 chr1 228482713 . G . . LowGQX . GT:DP:GQX:MQ 0/0:5:9:60 chr1 228482714 . G . . PASS . GT:DP:GQX:MQ 0/0:5:12:60 chr1 228482715 . A . . LowGQX END=228482725;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:6:60 chr1 228482726 . G C 9.30 LowGQX BaseQRankSum=-0.736;DP=3;Dels=0.00;FS=0.000;HRun=2;HaplotypeScore=0.0000;MQ=60;MQ0=0;MQRankSum=-0.736;QD=3.10;ReadPosRankSum=-0.736;SB=-30.12;TI=NM_052843,NM_001098623;GI=OBSCN,OBSCN;FC=Missense_A3881P,Missense_A3881P;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1,2:3:34.63:39,0,35:60:9:0.667 chr1 228482727 . C . . LowGQX END=228482732;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:6:60 chr1 228482733 . T C 3.07 LowGQX BaseQRankSum=0.804;DP=2;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;MQ=60;MQ0=0;MQRankSum=0.804;QD=1.54;ReadPosRankSum=0.804;SB=-0.01;TI=NM_052843,NM_001098623;GI=OBSCN,OBSCN;FC=Missense_L3883P,Missense_L3883P;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1,1:2:30.11:30,0,32:60:3:0.500 chr1 228482734 . C . . LowGQX . GT:DP:GQX:MQ 0/0:2:6:60 chr1 228482735 . A . . LowGQX END=228482745 GT ./. chr1 228486084 . T . . LowGQX END=228486424 GT ./. chr1 228486959 . G . . LowGQX END=228487224 GT ./. chr1 228487572 . G . . LowGQX END=228487847 GT ./. chr1 228491375 . G . . LowGQX END=228491640 GT ./. chr1 228492003 . G . . LowGQX END=228492268 GT ./. chr1 228492823 . G . . LowGQX END=228493088 GT ./. chr1 228494062 . G . . LowGQX END=228494342 GT ./. chr1 228494601 . G . . LowGQX END=228494869 GT ./. chr1 228494959 . G . . LowGQX END=228495233 GT ./. chr1 228495811 . G . . LowGQX END=228496085 GT ./. chr1 228496799 . G . . LowGQX END=228496997 GT ./. chr1 228497173 . C . . LowGQX END=228497273 GT ./. chr1 228503547 . G . . LowGQX END=228503821 GT ./. chr1 228504409 . G . . LowGQX END=228504686 GT ./. chr1 228505153 . C . . LowGQX END=228505453 GT ./. chr1 228505592 . G . . LowGQX END=228505875 GT ./. chr1 228506584 . G . . LowGQX END=228506956 GT ./. chr1 228509044 . G . . LowGQX END=228509921 GT ./. chr1 228511028 . G . . LowGQX END=228511308 GT ./. chr1 228520550 . T . . LowGQX END=228520650 GT ./. chr1 228520839 . C . . LowGQX END=228521025 GT ./. chr1 228521283 . G . . LowGQX END=228521482 GT ./. chr1 228522179 . T . . LowGQX END=228522279 GT ./. chr1 228522515 . G . . LowGQX END=228522635 GT ./. chr1 228522780 . G . . LowGQX END=228523000 GT ./. chr1 228523472 . C . . LowGQX END=228523572 GT ./. chr1 228523886 . C . . LowGQX END=228523986 GT ./. chr1 228524704 . G . . LowGQX END=228524828 GT ./. chr1 228524944 . G . . LowGQX END=228525085 GT ./. chr1 228525644 . G . . LowGQX END=228525846 GT ./. chr1 228525990 . G . . LowGQX END=228526102 GT ./. chr1 228526543 . C . . LowGQX END=228526728 GT ./. chr1 228527595 . C . . LowGQX END=228527794 GT ./. chr1 228527795 . T . . LowGQX END=228527803;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 228528185 . C . . LowGQX END=228528345 GT ./. chr1 228528424 . G . . LowGQX END=228528590 GT ./. chr1 228528795 . G . . LowGQX END=228528955 GT ./. chr1 228529137 . G . . LowGQX END=228529316 GT ./. chr1 228529819 . G . . LowGQX END=228529947 GT ./. chr1 228537590 . G . . LowGQX END=228537759 GT ./. chr1 228538443 . T . . LowGQX END=228538683 GT ./. chr1 228539011 . G . . LowGQX END=228539152 GT ./. chr1 228540651 . G . . LowGQX END=228540778 GT ./. chr1 228543813 . G . . LowGQX END=228544026 GT ./. chr1 228547297 . G . . LowGQX END=228548463 GT ./. chr1 228550276 . G . . LowGQX END=228550457 GT ./. chr1 228552681 . G . . LowGQX END=228552800 GT ./. chr1 228553136 . G . . LowGQX END=228553262 GT ./. chr1 228553771 . C . . LowGQX END=228553888 GT ./. chr1 228554100 . G . . LowGQX END=228554270 GT ./. chr1 228554500 . A . . LowGQX END=228554600 GT ./. chr1 228554675 . G . . LowGQX END=228554877 GT ./. chr1 228555537 . A . . LowGQX END=228555648 GT ./. chr1 228556039 . G . . LowGQX END=228556139 GT ./. chr1 228556422 . G . . LowGQX END=228556596 GT ./. chr1 228556800 . C . . LowGQX END=228556900 GT ./. chr1 228557642 . G . . LowGQX END=228557796 GT ./. chr1 228557887 . C . . LowGQX END=228557987 GT ./. chr1 228558379 . G . . LowGQX END=228558489 GT ./. chr1 228558723 . G . . LowGQX END=228558789 GT ./. chr1 228558790 . C . . LowGQX END=228558929;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 228558930 . A . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr1 228558931 . C . . LowGQX END=228558942;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 228558943 . C . . LowGQX . GT ./. chr1 228558944 . C . . LowGQX END=228558945;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 228558946 . C . . LowGQX . GT ./. chr1 228558947 . G . . LowGQX END=228558949;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 228558950 . G . . LowGQX . GT ./. chr1 228558951 . C . . LowGQX END=228558952;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 228558953 . T . . LowGQX . GT ./. chr1 228558954 . C . . LowGQX END=228558969;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 228558970 . A . . LowGQX . GT ./. chr1 228558971 . G . . LowGQX END=228559007;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 228559008 . C . . LowGQX . GT ./. chr1 228559009 . G . . LowGQX END=228559049;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 228559050 . A . . LowGQX END=228560783 GT ./. chr1 228561632 . G . . LowGQX END=228561743 GT ./. chr1 228562010 . C . . LowGQX END=228562126 GT ./. chr1 228562285 . G . . LowGQX END=228562454 GT ./. chr1 228563402 . G . . LowGQX END=228563526 GT ./. chr1 228563708 . G . . LowGQX END=228563880 GT ./. chr1 228564485 . C . . LowGQX END=228564585 GT ./. chr1 228564752 . G . . LowGQX END=228564993 GT ./. chr1 228565189 . G . . LowGQX END=228565414 GT ./. chr1 228565631 . G . . LowGQX END=228565740 GT ./. chr1 228565971 . G . . LowGQX END=228566131 GT ./. chr1 228566318 . G . . LowGQX END=228566497 GT ./. chr1 228582404 . A . . LowGQX END=228582956 GT ./. chr1 228584348 . C . . LowGQX END=228584906 GT ./. chr1 228588663 . A . . LowGQX END=228588898 GT ./. chr1 228589765 . G . . LowGQX END=228589865 GT ./. chr1 228593853 . A . . LowGQX END=228594265 GT ./. chr1 228595900 . G . . LowGQX END=228596455 GT ./. chr1 228596723 . C . . LowGQX END=228596979 GT ./. chr1 228596992 . A . . LowGQX END=228597152 GT ./. chr1 228598645 . A . . LowGQX END=228598880 GT ./. chr1 228601496 . A . . LowGQX END=228601596 GT ./. chr1 228602343 . A . . LowGQX END=228602776 GT ./. chr1 228612565 . G . . LowGQX END=228613078 GT ./. chr1 228645124 . C . . LowGQX END=228645521 GT ./. chr1 228645829 . T . . LowGQX END=228646214 GT ./. chr1 228675178 . C . . LowGQX END=228675588 GT ./. chr1 228676657 . A . . LowGQX END=228676757 GT ./. chr1 228680753 . G . . LowGQX END=228680976 GT ./. chr1 228681535 . T . . LowGQX END=228681635 GT ./. chr1 228698125 . T . . LowGQX END=228698380 GT ./. chr1 228699351 . C . . LowGQX END=228699706 GT ./. chr1 228699912 . G . . LowGQX END=228700012 GT ./. chr1 228785876 . T . . LowGQX END=228786372 GT ./. chr1 228871477 . C . . LowGQX END=228871757 GT ./. chr1 228873400 . A . . LowGQX END=228873500 GT ./. chr1 228879030 . A . . LowGQX END=228879490 GT ./. chr1 229385441 . C . . LowGQX END=229385853 GT ./. chr1 229406993 . G . . LowGQX END=229407153 GT ./. chr1 229422171 . T . . LowGQX END=229422324 GT ./. chr1 229424474 . A . . LowGQX END=229424644 GT ./. chr1 229431577 . C . . LowGQX END=229431677 GT ./. chr1 229433227 . A . . LowGQX END=229433386 GT ./. chr1 229434662 . T . . LowGQX END=229434822 GT ./. chr1 229438607 . A . . LowGQX END=229438727 GT ./. chr1 229440870 . A . . LowGQX END=229441076 GT ./. chr1 229460980 . C . . LowGQX END=229461161 GT ./. chr1 229462483 . A . . LowGQX END=229462756 GT ./. chr1 229463244 . C . . LowGQX END=229463344 GT ./. chr1 229476110 . T . . LowGQX END=229476210 GT ./. chr1 229477833 . C . . LowGQX END=229478215 GT ./. chr1 229567195 . A . . LowGQX END=229568230 GT ./. chr1 229568252 . C . . LowGQX END=229568679 GT ./. chr1 229568683 . G . . LowGQX END=229568914 GT ./. chr1 229577128 . G . . LowGQX END=229577228 GT ./. chr1 229577649 . A . . LowGQX END=229577829 GT ./. chr1 229580656 . C . . LowGQX END=229580756 GT ./. chr1 229584796 . T . . LowGQX END=229584956 GT ./. chr1 229586263 . T . . LowGQX END=229586363 GT ./. chr1 229588270 . A . . LowGQX END=229588393 GT ./. chr1 229593906 . A . . LowGQX END=229594046 GT ./. chr1 229596356 . A . . LowGQX END=229596519 GT ./. chr1 229599288 . A . . LowGQX END=229599426 GT ./. chr1 229600369 . A . . LowGQX END=229600625 GT ./. chr1 229601165 . A . . LowGQX END=229601325 GT ./. chr1 229602379 . A . . LowGQX END=229602506 GT ./. chr1 229606325 . A . . LowGQX END=229606554 GT ./. chr1 229611383 . A . . LowGQX END=229611483 GT ./. chr1 229613342 . A . . LowGQX END=229613510 GT ./. chr1 229619797 . A . . LowGQX END=229619897 GT ./. chr1 229622116 . A . . LowGQX END=229622306 GT ./. chr1 229623181 . A . . LowGQX END=229623363 GT ./. chr1 229625700 . A . . LowGQX END=229625852 GT ./. chr1 229631228 . A . . LowGQX END=229631328 GT ./. chr1 229631637 . A . . LowGQX END=229631797 GT ./. chr1 229633881 . A . . LowGQX END=229634056 GT ./. chr1 229634904 . T . . LowGQX END=229635004 GT ./. chr1 229635429 . A . . LowGQX END=229635568 GT ./. chr1 229636501 . A . . LowGQX END=229636613 GT ./. chr1 229637744 . A . . LowGQX END=229637852 GT ./. chr1 229641785 . A . . LowGQX END=229641908 GT ./. chr1 229643813 . A . . LowGQX END=229644013 GT ./. chr1 229653924 . C . . LowGQX END=229654160 GT ./. chr1 229654556 . C . . LowGQX END=229654656 GT ./. chr1 229657311 . A . . LowGQX END=229657411 GT ./. chr1 229661681 . A . . LowGQX END=229661866 GT ./. chr1 229662966 . C . . LowGQX END=229663066 GT ./. chr1 229665944 . A . . LowGQX END=229666158 GT ./. chr1 229667381 . A . . LowGQX END=229667481 GT ./. chr1 229675161 . A . . LowGQX END=229675341 GT ./. chr1 229676351 . A . . LowGQX END=229676502 GT ./. chr1 229677982 . A . . LowGQX END=229678121 GT ./. chr1 229683244 . A . . LowGQX END=229683451 GT ./. chr1 229684979 . A . . LowGQX END=229685184 GT ./. chr1 229693870 . G . . LowGQX END=229694402 GT ./. chr1 229730042 . A . . LowGQX END=229730844 GT ./. chr1 229737934 . A . . LowGQX END=229738669 GT ./. chr1 229745851 . A . . LowGQX END=229745960 GT ./. chr1 229749974 . G . . LowGQX END=229750232 GT ./. chr1 229763379 . C . . LowGQX END=229763509 GT ./. chr1 229768014 . A . . LowGQX END=229768214 GT ./. chr1 229770662 . A . . LowGQX END=229773997 GT ./. chr1 229779238 . C . . LowGQX END=229779443 GT ./. chr1 229781604 . A . . LowGQX END=229781719 GT ./. chr1 229783255 . A . . LowGQX END=229783502 GT ./. chr1 229786976 . T . . LowGQX END=229787076 GT ./. chr1 229789994 . A . . LowGQX END=229790138 GT ./. chr1 229794845 . A . . LowGQX END=229795047 GT ./. chr1 230193770 . T . . LowGQX END=230193870 GT ./. chr1 230202985 . A . . LowGQX END=230203156 GT ./. chr1 230313961 . T . . LowGQX END=230314061 GT ./. chr1 230338881 . A . . LowGQX END=230339039 GT ./. chr1 230371758 . A . . LowGQX END=230371861 GT ./. chr1 230372083 . T . . LowGQX END=230372183 GT ./. chr1 230372389 . T . . LowGQX END=230372489 GT ./. chr1 230379050 . A . . LowGQX END=230379220 GT ./. chr1 230381803 . T . . LowGQX END=230381903 GT ./. chr1 230384924 . T . . LowGQX END=230385024 GT ./. chr1 230386145 . C . . LowGQX END=230386309 GT ./. chr1 230390962 . A . . LowGQX END=230391093 GT ./. chr1 230398316 . T . . LowGQX END=230398416 GT ./. chr1 230398660 . T . . LowGQX END=230398760 GT ./. chr1 230400985 . A . . LowGQX END=230401116 GT ./. chr1 230410189 . A . . LowGQX END=230410313 GT ./. chr1 230415047 . A . . LowGQX END=230415207 GT ./. chr1 230415617 . T . . LowGQX END=230415735 GT ./. chr1 230459169 . C . . LowGQX END=230459369 GT ./. chr1 230461054 . A . . LowGQX END=230461164 GT ./. chr1 230468588 . A . . LowGQX END=230468790 GT ./. chr1 230472852 . A . . LowGQX END=230473037 GT ./. chr1 230486702 . A . . LowGQX END=230486841 GT ./. chr1 230492638 . A . . LowGQX END=230493070 GT ./. chr1 230498017 . A . . LowGQX END=230498126 GT ./. chr1 230503687 . A . . LowGQX END=230503893 GT ./. chr1 230513171 . G . . LowGQX END=230513370 GT ./. chr1 230778339 . C . . LowGQX END=230778439 GT ./. chr1 230795178 . A . . LowGQX END=230795374 GT ./. chr1 230796487 . A . . LowGQX END=230796587 GT ./. chr1 230798878 . C . . LowGQX END=230798978 GT ./. chr1 230800228 . A . . LowGQX END=230800336 GT ./. chr1 230804420 . A . . LowGQX END=230804533 GT ./. chr1 230805100 . A . . LowGQX END=230805284 GT ./. chr1 230807260 . A . . LowGQX END=230807389 GT ./. chr1 230810742 . A . . LowGQX END=230810873 GT ./. chr1 230814427 . T . . LowGQX END=230814527 GT ./. chr1 230814657 . A . . LowGQX END=230814801 GT ./. chr1 230819301 . C . . LowGQX END=230819401 GT ./. chr1 230820829 . A . . LowGQX END=230820985 GT ./. chr1 230822679 . A . . LowGQX END=230822881 GT ./. chr1 230823745 . A . . LowGQX END=230823904 GT ./. chr1 230824164 . A . . LowGQX END=230824311 GT ./. chr1 230825758 . A . . LowGQX END=230825902 GT ./. chr1 230827128 . A . . LowGQX END=230827313 GT ./. chr1 230829036 . A . . LowGQX END=230829142 GT ./. chr1 230838836 . A . . LowGQX END=230839127 GT ./. chr1 230839888 . C . . LowGQX END=230840135 GT ./. chr1 230841628 . G . . LowGQX END=230841998 GT ./. chr1 230845690 . A . . LowGQX END=230846648 GT ./. chr1 230883241 . C . . LowGQX END=230883458 GT ./. chr1 230891011 . C . . LowGQX END=230891033 GT ./. chr1 230891034 . G . . LowGQX END=230891116;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr1 230891117 . G . . LowGQX END=230891168 GT ./. chr1 230895256 . A . . LowGQX END=230895379 GT ./. chr1 230898397 . A . . LowGQX END=230898535 GT ./. chr1 230903285 . A . . LowGQX END=230903458 GT ./. chr1 230904918 . T . . LowGQX END=230905018 GT ./. chr1 230907753 . C . . LowGQX END=230907853 GT ./. chr1 230910289 . T . . LowGQX END=230910389 GT ./. chr1 230914717 . A . . LowGQX END=230914882 GT ./. chr1 230915923 . A . . LowGQX END=230916085 GT ./. chr1 230916244 . A . . LowGQX END=230916457 GT ./. chr1 230921696 . A . . LowGQX END=230921796 GT ./. chr1 230923259 . G . . LowGQX END=230923359 GT ./. chr1 230925857 . C . . LowGQX END=230925957 GT ./. chr1 230927593 . T . . LowGQX END=230927693 GT ./. chr1 230928157 . A . . LowGQX END=230928257 GT ./. chr1 230928586 . C . . LowGQX END=230928686 GT ./. chr1 230930907 . A . . LowGQX END=230931028 GT ./. chr1 230933888 . T . . LowGQX END=230933988 GT ./. chr1 230937280 . G . . LowGQX END=230937380 GT ./. chr1 230975526 . C . . LowGQX END=230975677 GT ./. chr1 230979097 . C . . LowGQX END=230979645 GT ./. chr1 230991390 . A . . LowGQX END=230991490 GT ./. chr1 231003915 . C . . LowGQX END=231004261 GT ./. chr1 231042649 . A . . LowGQX END=231042768 GT ./. chr1 231044054 . C . . LowGQX END=231044214 GT ./. chr1 231044448 . A . . LowGQX END=231044548 GT ./. chr1 231044678 . T . . LowGQX END=231044778 GT ./. chr1 231047206 . T . . LowGQX END=231047306 GT ./. chr1 231048327 . A . . LowGQX END=231048507 GT ./. chr1 231051937 . A . . LowGQX END=231052051 GT ./. chr1 231056172 . A . . LowGQX END=231056343 GT ./. chr1 231057099 . A . . LowGQX END=231057315 GT ./. chr1 231059584 . T . . LowGQX END=231059684 GT ./. chr1 231060585 . A . . LowGQX END=231060722 GT ./. chr1 231061261 . A . . LowGQX END=231061396 GT ./. chr1 231064681 . A . . LowGQX END=231064842 GT ./. chr1 231067042 . A . . LowGQX END=231067221 GT ./. chr1 231067480 . A . . LowGQX END=231067626 GT ./. chr1 231069517 . T . . LowGQX END=231069617 GT ./. chr1 231071904 . A . . LowGQX END=231072011 GT ./. chr1 231075130 . A . . LowGQX END=231075245 GT ./. chr1 231076184 . A . . LowGQX END=231076305 GT ./. chr1 231079549 . C . . LowGQX END=231079649 GT ./. chr1 231081118 . A . . LowGQX END=231081218 GT ./. chr1 231090065 . A . . LowGQX END=231090165 GT ./. chr1 231092253 . C . . LowGQX END=231092353 GT ./. chr1 231093958 . T . . LowGQX END=231094058 GT ./. chr1 231096953 . A . . LowGQX END=231097053 GT ./. chr1 231114293 . G . . LowGQX END=231114583 GT ./. chr1 231114850 . A . . LowGQX END=231115050 GT ./. chr1 231124014 . A . . LowGQX END=231124188 GT ./. chr1 231125854 . A . . LowGQX END=231126044 GT ./. chr1 231126285 . A . . LowGQX END=231126446 GT ./. chr1 231131504 . A . . LowGQX END=231131733 GT ./. chr1 231132865 . A . . LowGQX END=231133012 GT ./. chr1 231155574 . G . . LowGQX END=231155875 GT ./. chr1 231175665 . A . . LowGQX END=231175960 GT ./. chr1 231298704 . G . . LowGQX END=231299760 GT ./. chr1 231320759 . G . . LowGQX END=231320983 GT ./. chr1 231321821 . C . . LowGQX END=231321921 GT ./. chr1 231323238 . A . . LowGQX END=231323338 GT ./. chr1 231333115 . A . . LowGQX END=231333215 GT ./. chr1 231334792 . G . . LowGQX END=231334916 GT ./. chr1 231335893 . G . . LowGQX END=231336005 GT ./. chr1 231337103 . G . . LowGQX END=231337264 GT ./. chr1 231339612 . G . . LowGQX END=231339759 GT ./. chr1 231342397 . G . . LowGQX END=231342537 GT ./. chr1 231344692 . G . . LowGQX END=231344997 GT ./. chr1 231349560 . G . . LowGQX END=231349724 GT ./. chr1 231351104 . C . . LowGQX END=231351204 GT ./. chr1 231353543 . C . . LowGQX END=231353643 GT ./. chr1 231355634 . C . . LowGQX END=231355734 GT ./. chr1 231360023 . C . . LowGQX END=231360163 GT ./. chr1 231361192 . C . . LowGQX END=231361292 GT ./. chr1 231362452 . C . . LowGQX END=231362574 GT ./. chr1 231362717 . A . . LowGQX END=231362817 GT ./. chr1 231364824 . A . . LowGQX END=231364976 GT ./. chr1 231374552 . C . . LowGQX END=231374937 GT ./. chr1 231376718 . C . . LowGQX END=231376890 GT ./. chr1 231377074 . A . . LowGQX END=231377254 GT ./. chr1 231386656 . T . . LowGQX END=231386941 GT ./. chr1 231396202 . C . . LowGQX END=231396481 GT ./. chr1 231398418 . T . . LowGQX END=231398650 GT ./. chr1 231400988 . T . . LowGQX END=231401218 GT ./. chr1 231401407 . A . . LowGQX END=231401585 GT ./. chr1 231401709 . T . . LowGQX END=231401963 GT ./. chr1 231401972 . T . . LowGQX END=231402205 GT ./. chr1 231403375 . T . . LowGQX END=231403701 GT ./. chr1 231406453 . A . . LowGQX END=231406798 GT ./. chr1 231408007 . T . . LowGQX END=231408189 GT ./. chr1 231409617 . C . . LowGQX END=231409860 GT ./. chr1 231410916 . T . . LowGQX END=231411296 GT ./. chr1 231411830 . T . . LowGQX END=231411994 GT ./. chr1 231413187 . T . . LowGQX END=231413340 GT ./. chr1 231471312 . C . . LowGQX END=231473494 GT ./. chr1 231474128 . C . . LowGQX END=231474353 GT ./. chr1 231475513 . A . . LowGQX END=231475617 GT ./. chr1 231480407 . A . . LowGQX END=231480507 GT ./. chr1 231483541 . A . . LowGQX END=231483674 GT ./. chr1 231487048 . A . . LowGQX END=231487355 GT ./. chr1 231488354 . A . . LowGQX END=231489110 GT ./. chr1 231502106 . A . . LowGQX END=231502273 GT ./. chr1 231503264 . G . . LowGQX END=231503434 GT ./. chr1 231506257 . C . . LowGQX END=231506496 GT ./. chr1 231509675 . G . . LowGQX END=231509897 GT ./. chr1 231556693 . G . . LowGQX END=231557686 GT ./. chr1 231664515 . G . . LowGQX END=231664615 GT ./. chr1 231664999 . A . . LowGQX END=231665108 GT ./. chr1 231672957 . A . . LowGQX END=231673076 GT ./. chr1 231678206 . T . . LowGQX END=231678360 GT ./. chr1 231696822 . T . . LowGQX END=231697004 GT ./. chr1 231700272 . A . . LowGQX END=231700654 GT ./. chr1 231752586 . C . . LowGQX END=231752686 GT ./. chr1 231762503 . G . . LowGQX END=231762732 GT ./. chr1 231829521 . G . . LowGQX END=231830603 GT ./. chr1 231837650 . T . . LowGQX END=231837829 GT ./. chr1 231856587 . T . . LowGQX END=231856687 GT ./. chr1 231856692 . G . . LowGQX END=231856819 GT ./. chr1 231858234 . A . . LowGQX END=231858399 GT ./. chr1 231881118 . C . . LowGQX END=231881277 GT ./. chr1 231885621 . T . . LowGQX END=231885827 GT ./. chr1 231902835 . G . . LowGQX END=231903067 GT ./. chr1 231906530 . T . . LowGQX END=231906827 GT ./. chr1 231910384 . G . . LowGQX END=231910564 GT ./. chr1 231930935 . G . . LowGQX END=231931094 GT ./. chr1 231935803 . C . . LowGQX END=231936008 GT ./. chr1 231954024 . T . . LowGQX END=231954272 GT ./. chr1 231990473 . T . . LowGQX END=231990779 GT ./. chr1 232002218 . G . . LowGQX END=232002376 GT ./. chr1 232094503 . T . . LowGQX END=232094656 GT ./. chr1 232144530 . G . . LowGQX END=232144901 GT ./. chr1 232162180 . G . . LowGQX END=232162350 GT ./. chr1 232172437 . C . . LowGQX END=232172578 GT ./. chr1 232534871 . G . . LowGQX END=232535022 GT ./. chr1 232538129 . A . . LowGQX END=232538229 GT ./. chr1 232539192 . A . . LowGQX END=232539320 GT ./. chr1 232539848 . A . . LowGQX END=232539948 GT ./. chr1 232551238 . A . . LowGQX END=232551418 GT ./. chr1 232561333 . A . . LowGQX END=232561557 GT ./. chr1 232564155 . A . . LowGQX END=232564313 GT ./. chr1 232567991 . A . . LowGQX END=232568220 GT ./. chr1 232574852 . A . . LowGQX END=232575245 GT ./. chr1 232577035 . A . . LowGQX END=232577195 GT ./. chr1 232577512 . A . . LowGQX END=232577617 GT ./. chr1 232579340 . A . . LowGQX END=232579440 GT ./. chr1 232581262 . G . . LowGQX END=232581542 GT ./. chr1 232596631 . A . . LowGQX END=232596910 GT ./. chr1 232597910 . C . . LowGQX END=232598010 GT ./. chr1 232600584 . A . . LowGQX END=232601165 GT ./. chr1 232607085 . G . . LowGQX END=232607277 GT ./. chr1 232615371 . A . . LowGQX END=232615479 GT ./. chr1 232619516 . C . . LowGQX END=232619715 GT ./. chr1 232626618 . A . . LowGQX END=232626811 GT ./. chr1 232629271 . A . . LowGQX END=232629409 GT ./. chr1 232649601 . A . . LowGQX END=232651088 GT ./. chr1 232940769 . G . . LowGQX END=232941192 GT ./. chr1 232941193 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941194 . C . . LowGQX END=232941195 GT ./. chr1 232941196 . A . . LowGQX END=232941197;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941198 . G . . LowGQX END=232941199 GT ./. chr1 232941200 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941201 . G . . LowGQX . GT ./. chr1 232941202 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941203 . C . . LowGQX . GT ./. chr1 232941204 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941205 . T . . LowGQX . GT ./. chr1 232941206 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941207 . G . . LowGQX . GT ./. chr1 232941208 . C . . LowGQX END=232941210;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941211 . T . . LowGQX . GT ./. chr1 232941212 . C . . LowGQX END=232941213;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941214 . G . . LowGQX . GT ./. chr1 232941215 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941216 . G . . LowGQX END=232941217 GT ./. chr1 232941218 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941219 . G . . LowGQX END=232941225 GT ./. chr1 232941226 . T . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941227 . C . 8.91 LowGQX DP=1;MQ=57;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:0:1:0.02:57:0 chr1 232941228 . G . . LowGQX END=232941231;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941232 . G . . LowGQX . GT ./. chr1 232941233 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941234 . G . . LowGQX . GT ./. chr1 232941235 . C . . LowGQX END=232941238;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941239 . T . . LowGQX END=232941240 GT ./. chr1 232941241 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941242 . T . . LowGQX END=232941246 GT ./. chr1 232941247 . T . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941248 . G . . LowGQX END=232941249 GT ./. chr1 232941250 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941251 . T A 7.78 LowGQX;LowGQ DP=1;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;MQ=57;MQ0=0;QD=7.78;SB=-0.01;TI=NM_019090;GI=KIAA1383;FC=Missense_V161E;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,1:1:3.01:37,3,0:57:3:1.000 chr1 232941252 . G . . LowGQX END=232941253 GT ./. chr1 232941254 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941255 . T . . LowGQX . GT ./. chr1 232941256 . T . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941257 . T . . LowGQX . GT ./. chr1 232941258 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941259 . G . . LowGQX . GT ./. chr1 232941260 . A . . LowGQX END=232941261;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941262 . G . . LowGQX END=232941263 GT ./. chr1 232941264 . C . . LowGQX END=232941265;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941266 . G . . LowGQX END=232941271 GT ./. chr1 232941272 . T . . LowGQX END=232941274;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941275 . C . . LowGQX END=232941276 GT ./. chr1 232941277 . T . . LowGQX END=232941278;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941279 . C . . LowGQX . GT ./. chr1 232941280 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941281 . C . . LowGQX . GT ./. chr1 232941282 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941283 . G . . LowGQX . GT ./. chr1 232941284 . C . . LowGQX END=232941287;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941288 . C . . LowGQX . GT ./. chr1 232941289 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941290 . C . . LowGQX END=232941293 GT ./. chr1 232941294 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941295 . G . . LowGQX . GT ./. chr1 232941296 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941297 . G . . LowGQX END=232941301 GT ./. chr1 232941302 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941303 . G . . LowGQX END=232941305 GT ./. chr1 232941306 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941307 . G . . LowGQX . GT ./. chr1 232941308 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941309 . A . . LowGQX END=232941313 GT ./. chr1 232941314 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941315 . G . . LowGQX END=232941317 GT ./. chr1 232941318 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941319 . A . . LowGQX . GT ./. chr1 232941320 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941321 . G . . LowGQX . GT ./. chr1 232941322 . G . . LowGQX END=232941323;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941324 . G . . LowGQX . GT ./. chr1 232941325 . C . . LowGQX END=232941326;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941327 . G . . LowGQX . GT ./. chr1 232941328 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941329 . G . . LowGQX END=232941330 GT ./. chr1 232941331 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941332 . A . . LowGQX END=232941335 GT ./. chr1 232941336 . C . . LowGQX END=232941341;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:57 chr1 232941342 . G . . LowGQX END=232941352 GT ./. chr1 232941353 . T . . LowGQX END=232941354;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 232941355 . T . . LowGQX END=232941356 GT ./. chr1 232941357 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 232941358 . C . . LowGQX END=232941360 GT ./. chr1 232941361 . G . . LowGQX END=232941377;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 232941378 . G . . LowGQX END=232941379 GT ./. chr1 232941380 . T . . LowGQX END=232941385;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 232941386 . T . . LowGQX . GT ./. chr1 232941387 . C . . LowGQX END=232941393;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 232941394 . C . . LowGQX . GT ./. chr1 232941395 . T . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 232941396 . G . . LowGQX . GT ./. chr1 232941397 . T . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 232941398 . T . . LowGQX . GT ./. chr1 232941399 . G . . LowGQX END=232941401;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 232941402 . T . . LowGQX . GT ./. chr1 232941403 . T . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 232941404 . A . . LowGQX . GT ./. chr1 232941405 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr1 232941406 . C . . LowGQX . GT ./. chr1 232941407 . C . . LowGQX END=232941408;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 232941409 . C . . LowGQX END=232941410 GT ./. chr1 232941411 . T . . LowGQX END=232941412;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 232941413 . A . . LowGQX . GT ./. chr1 232941414 . C . . LowGQX END=232941426;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 232941427 . C . . LowGQX . GT ./. chr1 232941428 . C . . LowGQX END=232941431;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 232941432 . C . . LowGQX . GT ./. chr1 232941433 . G . . LowGQX END=232941459;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 232941460 . T . . LowGQX . GT ./. chr1 232941461 . T . . LowGQX END=232941503;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 232941504 . C . . LowGQX END=232943914 GT ./. chr1 233086364 . T . . LowGQX END=233086524 GT ./. chr1 233091301 . A . . LowGQX END=233091491 GT ./. chr1 233092091 . A . . LowGQX END=233092192 GT ./. chr1 233105653 . A . . LowGQX END=233105867 GT ./. chr1 233112087 . G . . LowGQX END=233112271 GT ./. chr1 233113894 . C . . LowGQX END=233113994 GT ./. chr1 233120049 . G . . LowGQX END=233120224 GT ./. chr1 233121699 . G . . LowGQX END=233122287 GT ./. chr1 233133996 . C . . LowGQX END=233134196 GT ./. chr1 233134850 . C . . LowGQX END=233135126 GT ./. chr1 233135979 . A . . LowGQX END=233136349 GT ./. chr1 233137282 . C . . LowGQX END=233137428 GT ./. chr1 233150410 . C . . LowGQX END=233150524 GT ./. chr1 233152666 . C . . LowGQX END=233152901 GT ./. chr1 233160891 . C . . LowGQX END=233161146 GT ./. chr1 233190013 . C . . LowGQX END=233190230 GT ./. chr1 233192973 . C . . LowGQX END=233193073 GT ./. chr1 233225806 . C . . LowGQX END=233225976 GT ./. chr1 233231421 . T . . LowGQX END=233231610 GT ./. chr1 233248651 . A . . LowGQX END=233248751 GT ./. chr1 233270719 . T . . LowGQX END=233270937 GT ./. chr1 233275459 . C . . LowGQX END=233275602 GT ./. chr1 233296028 . C . . LowGQX END=233296180 GT ./. chr1 233297013 . A . . LowGQX END=233297113 GT ./. chr1 233313546 . A . . LowGQX END=233313646 GT ./. chr1 233314811 . C . . LowGQX END=233314922 GT ./. chr1 233334621 . G . . LowGQX END=233334781 GT ./. chr1 233335899 . C . . LowGQX END=233336011 GT ./. chr1 233337895 . G . . LowGQX END=233337997 GT ./. chr1 233344263 . C . . LowGQX END=233344436 GT ./. chr1 233353611 . A . . LowGQX END=233353711 GT ./. chr1 233353776 . C . . LowGQX END=233353931 GT ./. chr1 233362971 . C . . LowGQX END=233363118 GT ./. chr1 233372590 . C . . LowGQX END=233372727 GT ./. chr1 233386482 . C . . LowGQX END=233386582 GT ./. chr1 233388099 . C . . LowGQX END=233388246 GT ./. chr1 233388386 . C . . LowGQX END=233388535 GT ./. chr1 233393773 . C . . LowGQX END=233395091 GT ./. chr1 233396940 . C . . LowGQX END=233397099 GT ./. chr1 233397740 . T . . LowGQX END=233397912 GT ./. chr1 233398703 . C . . LowGQX END=233398910 GT ./. chr1 233431041 . A . . LowGQX END=233431225 GT ./. chr1 233463762 . C . . LowGQX END=233464582 GT ./. chr1 233482186 . A . . LowGQX END=233482416 GT ./. chr1 233489551 . A . . LowGQX END=233489704 GT ./. chr1 233490560 . A . . LowGQX END=233490760 GT ./. chr1 233497797 . A . . LowGQX END=233498042 GT ./. chr1 233507782 . A . . LowGQX END=233507945 GT ./. chr1 233511618 . A . . LowGQX END=233511838 GT ./. chr1 233512124 . T . . LowGQX END=233512276 GT ./. chr1 233514675 . A . . LowGQX END=233515459 GT ./. chr1 233518049 . A . . LowGQX END=233518460 GT ./. chr1 233749916 . A . . LowGQX END=233750275 GT ./. chr1 233766980 . T . . LowGQX END=233767080 GT ./. chr1 233785687 . G . . LowGQX END=233785796 GT ./. chr1 233802339 . A . . LowGQX END=233802739 GT ./. chr1 233807015 . A . . LowGQX END=233807279 GT ./. chr1 234040801 . C . . LowGQX END=234040901 GT ./. chr1 234041273 . A . . LowGQX END=234041507 GT ./. chr1 234350233 . G . . LowGQX END=234350333 GT ./. chr1 234367161 . A . . LowGQX END=234367490 GT ./. chr1 234444845 . A . . LowGQX END=234445069 GT ./. chr1 234452346 . A . . LowGQX END=234452476 GT ./. chr1 234454495 . A . . LowGQX END=234454692 GT ./. chr1 234455839 . T . . LowGQX END=234455939 GT ./. chr1 234458752 . A . . LowGQX END=234458992 GT ./. chr1 234509212 . A . . LowGQX END=234509425 GT ./. chr1 234509463 . C . . LowGQX END=234509589 GT ./. chr1 234509972 . A . . LowGQX END=234510162 GT ./. chr1 234519467 . A . . LowGQX END=234519567 GT ./. chr1 234527321 . C . . LowGQX END=234527521 GT ./. chr1 234528160 . A . . LowGQX END=234528301 GT ./. chr1 234529106 . A . . LowGQX END=234529235 GT ./. chr1 234529390 . A . . LowGQX END=234529586 GT ./. chr1 234534126 . A . . LowGQX END=234534302 GT ./. chr1 234536918 . T . . LowGQX END=234537018 GT ./. chr1 234541647 . A . . LowGQX END=234541848 GT ./. chr1 234546185 . A . . LowGQX END=234546339 GT ./. chr1 234553828 . A . . LowGQX END=234554018 GT ./. chr1 234556446 . A . . LowGQX END=234556561 GT ./. chr1 234561357 . A . . LowGQX END=234561542 GT ./. chr1 234563049 . T . . LowGQX END=234563149 GT ./. chr1 234563309 . T . . LowGQX END=234563515 GT ./. chr1 234564880 . A . . LowGQX END=234565073 GT ./. chr1 234565160 . A . . LowGQX END=234565426 GT ./. chr1 234565831 . A . . LowGQX END=234566050 GT ./. chr1 234569124 . A . . LowGQX END=234569320 GT ./. chr1 234573019 . A . . LowGQX END=234573121 GT ./. chr1 234582547 . A . . LowGQX END=234582747 GT ./. chr1 234584224 . A . . LowGQX END=234584328 GT ./. chr1 234586172 . A . . LowGQX END=234586352 GT ./. chr1 234593408 . C . . LowGQX END=234593561 GT ./. chr1 234594974 . A . . LowGQX END=234595075 GT ./. chr1 234596005 . A . . LowGQX END=234596145 GT ./. chr1 234599581 . A . . LowGQX END=234599683 GT ./. chr1 234601379 . T . . LowGQX END=234601479 GT ./. chr1 234603246 . A . . LowGQX END=234603399 GT ./. chr1 234606862 . A . . LowGQX END=234607019 GT ./. chr1 234608458 . A . . LowGQX END=234608618 GT ./. chr1 234613906 . A . . LowGQX END=234614856 GT ./. chr1 234742881 . A . . LowGQX END=234743601 GT ./. chr1 234744191 . A . . LowGQX END=234745244 GT ./. chr1 235275297 . C . . LowGQX END=235275452 GT ./. chr1 235277081 . A . . LowGQX END=235277228 GT ./. chr1 235283124 . G . . LowGQX END=235283224 GT ./. chr1 235285615 . A . . LowGQX END=235285769 GT ./. chr1 235291118 . A . . LowGQX END=235291253 GT ./. chr1 235291908 . A . . LowGQX END=235292033 GT ./. chr1 235295026 . T . . LowGQX END=235295315 GT ./. chr1 235298965 . A . . LowGQX END=235299088 GT ./. chr1 235299319 . A . . LowGQX END=235299419 GT ./. chr1 235301174 . A . . LowGQX END=235301274 GT ./. chr1 235301398 . A . . LowGQX END=235301498 GT ./. chr1 235311691 . G . . LowGQX END=235311791 GT ./. chr1 235315991 . T . . LowGQX END=235316091 GT ./. chr1 235318154 . A . . LowGQX END=235318494 GT ./. chr1 235319903 . C . . LowGQX END=235320003 GT ./. chr1 235323558 . C . . LowGQX END=235323658 GT ./. chr1 235323824 . A . . LowGQX END=235323965 GT ./. chr1 235324206 . A . . LowGQX END=235324385 GT ./. chr1 235324487 . A . . LowGQX END=235324773 GT ./. chr1 235331838 . T . . LowGQX END=235331970 GT ./. chr1 235335931 . A . . LowGQX END=235336082 GT ./. chr1 235338497 . A . . LowGQX END=235338717 GT ./. chr1 235340164 . C . . LowGQX END=235340264 GT ./. chr1 235341089 . T . . LowGQX END=235341231 GT ./. chr1 235344865 . C . . LowGQX END=235346111 GT ./. chr1 235350355 . C . . LowGQX END=235350455 GT ./. chr1 235357326 . A . . LowGQX END=235357529 GT ./. chr1 235359274 . T . . LowGQX END=235359439 GT ./. chr1 235377082 . A . . LowGQX END=235377344 GT ./. chr1 235383086 . T . . LowGQX END=235383286 GT ./. chr1 235383615 . A . . LowGQX END=235383863 GT ./. chr1 235384878 . A . . LowGQX END=235384980 GT ./. chr1 235386409 . T . . LowGQX END=235386579 GT ./. chr1 235387946 . C . . LowGQX END=235388105 GT ./. chr1 235392528 . T . . LowGQX END=235392728 GT ./. chr1 235394366 . A . . LowGQX END=235394517 GT ./. chr1 235397666 . T . . LowGQX END=235397818 GT ./. chr1 235403626 . A . . LowGQX END=235403851 GT ./. chr1 235409731 . T . . LowGQX END=235409831 GT ./. chr1 235416035 . G . . LowGQX END=235416135 GT ./. chr1 235418971 . T . . LowGQX END=235419071 GT ./. chr1 235420458 . A . . LowGQX END=235420558 GT ./. chr1 235423955 . A . . LowGQX END=235424115 GT ./. chr1 235490182 . C . . LowGQX END=235490282 GT ./. chr1 235498565 . T . . LowGQX END=235498665 GT ./. chr1 235504951 . G . . LowGQX END=235505109 GT ./. chr1 235505324 . A . . LowGQX END=235506090 GT ./. chr1 235543314 . T . . LowGQX END=235543516 GT ./. chr1 235564767 . C . . LowGQX END=235564954 GT ./. chr1 235577697 . C . . LowGQX END=235577985 GT ./. chr1 235582722 . T . . LowGQX END=235582928 GT ./. chr1 235590404 . A . . LowGQX END=235590606 GT ./. chr1 235593969 . T . . LowGQX END=235594171 GT ./. chr1 235596260 . G . . LowGQX END=235596414 GT ./. chr1 235597468 . A . . LowGQX END=235597647 GT ./. chr1 235599009 . A . . LowGQX END=235599207 GT ./. chr1 235599650 . A . . LowGQX END=235599975 GT ./. chr1 235600586 . A . . LowGQX END=235600841 GT ./. chr1 235602033 . T . . LowGQX END=235602289 GT ./. chr1 235605078 . A . . LowGQX END=235605249 GT ./. chr1 235606116 . A . . LowGQX END=235606278 GT ./. chr1 235611613 . C . . LowGQX END=235611807 GT ./. chr1 235611934 . T . . LowGQX END=235612129 GT ./. chr1 235613519 . T . . LowGQX END=235613658 GT ./. chr1 235616381 . A . . LowGQX END=235616481 GT ./. chr1 235617466 . A . . LowGQX END=235617630 GT ./. chr1 235618869 . A . . LowGQX END=235618999 GT ./. chr1 235621909 . A . . LowGQX END=235622097 GT ./. chr1 235628935 . T . . LowGQX END=235629035 GT ./. chr1 235634162 . A . . LowGQX END=235634277 GT ./. chr1 235643368 . A . . LowGQX END=235643468 GT ./. chr1 235647636 . A . . LowGQX END=235647834 GT ./. chr1 235652471 . A . . LowGQX END=235652576 GT ./. chr1 235657989 . A . . LowGQX END=235658141 GT ./. chr1 235659495 . C . . LowGQX END=235659664 GT ./. chr1 235667439 . A . . LowGQX END=235667598 GT ./. chr1 235715407 . A . . LowGQX END=235715540 GT ./. chr1 235747038 . A . . LowGQX END=235747141 GT ./. chr1 235826189 . A . . LowGQX END=235826430 GT ./. chr1 235827233 . A . . LowGQX END=235827407 GT ./. chr1 235827714 . C . . LowGQX END=235827973 GT ./. chr1 235840340 . G . . LowGQX END=235840540 GT ./. chr1 235840729 . A . . LowGQX END=235840971 GT ./. chr1 235850198 . T . . LowGQX END=235850399 GT ./. chr1 235856599 . A . . LowGQX END=235856838 GT ./. chr1 235860332 . A . . LowGQX END=235860624 GT ./. chr1 235865996 . C . . LowGQX END=235866329 GT ./. chr1 235872340 . A . . LowGQX END=235872660 GT ./. chr1 235875306 . A . . LowGQX END=235875549 GT ./. chr1 235878450 . G . . LowGQX END=235878709 GT ./. chr1 235879961 . A . . LowGQX END=235880130 GT ./. chr1 235883910 . A . . LowGQX END=235884247 GT ./. chr1 235887277 . T . . LowGQX END=235887532 GT ./. chr1 235891325 . T . . LowGQX END=235891483 GT ./. chr1 235892845 . A . . LowGQX END=235893009 GT ./. chr1 235894096 . T . . LowGQX END=235894529 GT ./. chr1 235896752 . A . . LowGQX END=235897043 GT ./. chr1 235897079 . A . . LowGQX END=235897258 GT ./. chr1 235897732 . T . . LowGQX END=235898025 GT ./. chr1 235901841 . A . . LowGQX END=235901941 GT ./. chr1 235904671 . T . . LowGQX END=235904980 GT ./. chr1 235907228 . C . . LowGQX END=235907509 GT ./. chr1 235909585 . T . . LowGQX END=235909879 GT ./. chr1 235910470 . C . . LowGQX END=235910632 GT ./. chr1 235914459 . A . . LowGQX END=235914714 GT ./. chr1 235915254 . G . . LowGQX END=235915523 GT ./. chr1 235916293 . T . . LowGQX END=235916626 GT ./. chr1 235918727 . A . . LowGQX END=235918999 GT ./. chr1 235920530 . T . . LowGQX END=235920810 GT ./. chr1 235922221 . T . . LowGQX END=235922951 GT ./. chr1 235925969 . A . . LowGQX END=235926193 GT ./. chr1 235929328 . A . . LowGQX END=235929629 GT ./. chr1 235933409 . A . . LowGQX END=235933649 GT ./. chr1 235937091 . T . . LowGQX END=235937343 GT ./. chr1 235938162 . A . . LowGQX END=235938438 GT ./. chr1 235940312 . T . . LowGQX END=235940660 GT ./. chr1 235944114 . A . . LowGQX END=235944407 GT ./. chr1 235945176 . T . . LowGQX END=235945439 GT ./. chr1 235950449 . A . . LowGQX END=235950725 GT ./. chr1 235951950 . A . . LowGQX END=235952197 GT ./. chr1 235954923 . A . . LowGQX END=235955477 GT ./. chr1 235956752 . G . . LowGQX END=235956964 GT ./. chr1 235963569 . T . . LowGQX END=235963738 GT ./. chr1 235964120 . G . . LowGQX END=235964449 GT ./. chr1 235966157 . T . . LowGQX END=235966416 GT ./. chr1 235967753 . C . . LowGQX END=235968017 GT ./. chr1 235968992 . A . . LowGQX END=235970124 GT ./. chr1 235971704 . T . . LowGQX END=235973886 GT ./. chr1 235976220 . T . . LowGQX END=235976413 GT ./. chr1 235993455 . A . . LowGQX END=235993769 GT ./. chr1 236141165 . C . . LowGQX END=236141291 GT ./. chr1 236142293 . A . . LowGQX END=236142410 GT ./. chr1 236143120 . A . . LowGQX END=236143248 GT ./. chr1 236143794 . A . . LowGQX END=236143956 GT ./. chr1 236144909 . A . . LowGQX END=236145085 GT ./. chr1 236148677 . A . . LowGQX END=236148808 GT ./. chr1 236154173 . A . . LowGQX END=236154361 GT ./. chr1 236156943 . A . . LowGQX END=236157175 GT ./. chr1 236175219 . A . . LowGQX END=236175346 GT ./. chr1 236176709 . A . . LowGQX END=236176863 GT ./. chr1 236180446 . A . . LowGQX END=236180576 GT ./. chr1 236187368 . A . . LowGQX END=236187516 GT ./. chr1 236189194 . A . . LowGQX END=236189444 GT ./. chr1 236192848 . A . . LowGQX END=236193053 GT ./. chr1 236195699 . A . . LowGQX END=236195955 GT ./. chr1 236201402 . A . . LowGQX END=236201556 GT ./. chr1 236205208 . A . . LowGQX END=236205595 GT ./. chr1 236208755 . A . . LowGQX END=236208986 GT ./. chr1 236211988 . A . . LowGQX END=236212298 GT ./. chr1 236227849 . T . . LowGQX END=236228505 GT ./. chr1 236305837 . T . . LowGQX END=236306339 GT ./. chr1 236331980 . C . . LowGQX END=236332080 GT ./. chr1 236341712 . A . . LowGQX END=236341939 GT ./. chr1 236343177 . A . . LowGQX END=236343467 GT ./. chr1 236347076 . A . . LowGQX END=236347209 GT ./. chr1 236368424 . A . . LowGQX END=236368553 GT ./. chr1 236371348 . A . . LowGQX END=236371461 GT ./. chr1 236381744 . T . . LowGQX END=236381897 GT ./. chr1 236384130 . A . . LowGQX END=236384268 GT ./. chr1 236385162 . T . . LowGQX END=236385318 GT ./. chr1 236388355 . T . . LowGQX END=236388455 GT ./. chr1 236389567 . A . . LowGQX END=236389818 GT ./. chr1 236389944 . T . . LowGQX END=236390044 GT ./. chr1 236393432 . T . . LowGQX END=236393588 GT ./. chr1 236396084 . A . . LowGQX END=236396184 GT ./. chr1 236399063 . T . . LowGQX END=236399163 GT ./. chr1 236399576 . A . . LowGQX END=236399701 GT ./. chr1 236406709 . T . . LowGQX END=236406809 GT ./. chr1 236413123 . T . . LowGQX END=236413277 GT ./. chr1 236415321 . G . . LowGQX END=236415421 GT ./. chr1 236416714 . T . . LowGQX END=236416814 GT ./. chr1 236433173 . A . . LowGQX END=236433297 GT ./. chr1 236444980 . A . . LowGQX END=236445086 GT ./. chr1 236557685 . A . . LowGQX END=236557857 GT ./. chr1 236558879 . C . . LowGQX END=236559012 GT ./. chr1 236572465 . T . . LowGQX END=236572626 GT ./. chr1 236577509 . G . . LowGQX END=236577651 GT ./. chr1 236590641 . T . . LowGQX END=236590802 GT ./. chr1 236631480 . T . . LowGQX END=236631628 GT ./. chr1 236645516 . C . . LowGQX END=236646001 GT ./. chr1 236687395 . G . . LowGQX END=236687799 GT ./. chr1 236689344 . C . . LowGQX END=236689444 GT ./. chr1 236700792 . C . . LowGQX END=236700945 GT ./. chr1 236702177 . A . . LowGQX END=236702392 GT ./. chr1 236703862 . A . . LowGQX END=236703986 GT ./. chr1 236704882 . A . . LowGQX END=236705033 GT ./. chr1 236706025 . T . . LowGQX END=236706125 GT ./. chr1 236706213 . A . . LowGQX END=236706343 GT ./. chr1 236706718 . G . . LowGQX END=236706951 GT ./. chr1 236708048 . A . . LowGQX END=236708218 GT ./. chr1 236711310 . A . . LowGQX END=236711464 GT ./. chr1 236714197 . A . . LowGQX END=236714297 GT ./. chr1 236715297 . A . . LowGQX END=236715370 GT ./. chr1 236715371 . C . . LowGQX END=236715410;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 236716879 . A . . LowGQX END=236717042 GT ./. chr1 236717866 . C . . LowGQX END=236718055 GT ./. chr1 236718594 . A . . LowGQX END=236718767 GT ./. chr1 236718849 . A . . LowGQX END=236718958 GT ./. chr1 236719103 . A . . LowGQX END=236719242 GT ./. chr1 236719398 . A . . LowGQX END=236719561 GT ./. chr1 236720493 . A . . LowGQX END=236720648 GT ./. chr1 236721535 . A . . LowGQX END=236721832 GT ./. chr1 236722293 . A . . LowGQX END=236722438 GT ./. chr1 236723012 . A . . LowGQX END=236723140 GT ./. chr1 236724499 . A . . LowGQX END=236724599 GT ./. chr1 236727796 . A . . LowGQX END=236727964 GT ./. chr1 236729217 . A . . LowGQX END=236729348 GT ./. chr1 236729944 . A . . LowGQX END=236730179 GT ./. chr1 236732294 . A . . LowGQX END=236732427 GT ./. chr1 236734649 . A . . LowGQX END=236734819 GT ./. chr1 236734866 . A . . LowGQX END=236735036 GT ./. chr1 236735709 . A . . LowGQX END=236735857 GT ./. chr1 236736023 . A . . LowGQX END=236736131 GT ./. chr1 236737500 . A . . LowGQX END=236737680 GT ./. chr1 236737959 . A . . LowGQX END=236738206 GT ./. chr1 236739517 . A . . LowGQX END=236739680 GT ./. chr1 236740078 . A . . LowGQX END=236740252 GT ./. chr1 236744510 . T . . LowGQX END=236744717 GT ./. chr1 236746034 . A . . LowGQX END=236746175 GT ./. chr1 236746311 . A . . LowGQX END=236746499 GT ./. chr1 236748323 . A . . LowGQX END=236748519 GT ./. chr1 236749118 . A . . LowGQX END=236749298 GT ./. chr1 236749539 . A . . LowGQX END=236749755 GT ./. chr1 236750697 . C . . LowGQX END=236750797 GT ./. chr1 236751246 . A . . LowGQX END=236751346 GT ./. chr1 236754145 . A . . LowGQX END=236754257 GT ./. chr1 236755291 . A . . LowGQX END=236755413 GT ./. chr1 236755771 . T . . LowGQX END=236755936 GT ./. chr1 236757260 . A . . LowGQX END=236757417 GT ./. chr1 236758838 . A . . LowGQX END=236758976 GT ./. chr1 236759131 . A . . LowGQX END=236759347 GT ./. chr1 236760134 . A . . LowGQX END=236760279 GT ./. chr1 236761176 . A . . LowGQX END=236761282 GT ./. chr1 236762781 . A . . LowGQX END=236762927 GT ./. chr1 236766455 . G . . LowGQX END=236766679 GT ./. chr1 236767182 . G . . LowGQX END=236767398 GT ./. chr1 236849923 . C . . LowGQX END=236850151 GT ./. chr1 236881107 . G . . LowGQX END=236881324 GT ./. chr1 236882143 . A . . LowGQX END=236882365 GT ./. chr1 236883354 . A . . LowGQX END=236883543 GT ./. chr1 236889182 . T . . LowGQX END=236889372 GT ./. chr1 236890927 . C . . LowGQX END=236891108 GT ./. chr1 236894482 . T . . LowGQX END=236894666 GT ./. chr1 236897726 . C . . LowGQX END=236897826 GT ./. chr1 236898884 . T . . LowGQX END=236899072 GT ./. chr1 236899858 . G . . LowGQX END=236899969 GT ./. chr1 236900371 . G . . LowGQX END=236900566 GT ./. chr1 236902551 . G . . LowGQX END=236902884 GT ./. chr1 236906145 . A . . LowGQX END=236906395 GT ./. chr1 236907875 . A . . LowGQX END=236908128 GT ./. chr1 236910916 . T . . LowGQX END=236911127 GT ./. chr1 236912373 . G . . LowGQX END=236912616 GT ./. chr1 236914709 . A . . LowGQX END=236915004 GT ./. chr1 236917196 . C . . LowGQX END=236917433 GT ./. chr1 236918268 . G . . LowGQX END=236918550 GT ./. chr1 236920735 . T . . LowGQX END=236920984 GT ./. chr1 236922973 . T . . LowGQX END=236923141 GT ./. chr1 236924264 . T . . LowGQX END=236924525 GT ./. chr1 236925710 . T . . LowGQX END=236925971 GT ./. chr1 236958620 . A . . LowGQX END=236959091 GT ./. chr1 236966677 . C . . LowGQX END=236966994 GT ./. chr1 236969393 . G . . LowGQX END=236969585 GT ./. chr1 236971953 . A . . LowGQX END=236972125 GT ./. chr1 236973752 . A . . LowGQX END=236973947 GT ./. chr1 236974905 . A . . LowGQX END=236975005 GT ./. chr1 236975987 . A . . LowGQX END=236976196 GT ./. chr1 236978844 . T . . LowGQX END=236979015 GT ./. chr1 236979698 . T . . LowGQX END=236979895 GT ./. chr1 236987368 . T . . LowGQX END=236987571 GT ./. chr1 236988587 . G . . LowGQX END=236988751 GT ./. chr1 236990078 . A . . LowGQX END=236990248 GT ./. chr1 236992438 . A . . LowGQX END=236992620 GT ./. chr1 236995215 . T . . LowGQX END=236995430 GT ./. chr1 236998796 . T . . LowGQX END=236999039 GT ./. chr1 237001663 . T . . LowGQX END=237001951 GT ./. chr1 237013593 . T . . LowGQX END=237013875 GT ./. chr1 237015770 . C . . LowGQX END=237015989 GT ./. chr1 237016197 . C . . LowGQX END=237016440 GT ./. chr1 237023082 . G . . LowGQX END=237023274 GT ./. chr1 237024374 . T . . LowGQX END=237024629 GT ./. chr1 237025485 . A . . LowGQX END=237025695 GT ./. chr1 237026703 . G . . LowGQX END=237026906 GT ./. chr1 237037022 . G . . LowGQX END=237037192 GT ./. chr1 237037975 . T . . LowGQX END=237038198 GT ./. chr1 237044004 . A . . LowGQX END=237044188 GT ./. chr1 237048370 . T . . LowGQX END=237048571 GT ./. chr1 237049541 . G . . LowGQX END=237049719 GT ./. chr1 237052430 . A . . LowGQX END=237052688 GT ./. chr1 237054382 . A . . LowGQX END=237054681 GT ./. chr1 237057606 . A . . LowGQX END=237057909 GT ./. chr1 237058607 . G . . LowGQX END=237058902 GT ./. chr1 237060255 . C . . LowGQX END=237060470 GT ./. chr1 237060807 . T . . LowGQX END=237060996 GT ./. chr1 237063426 . A . . LowGQX END=237063526 GT ./. chr1 237205754 . C . . LowGQX END=237205916 GT ./. chr1 237430867 . T . . LowGQX END=237430967 GT ./. chr1 237433568 . A . . LowGQX END=237433668 GT ./. chr1 237433796 . G . . LowGQX END=237433917 GT ./. chr1 237494140 . A . . LowGQX END=237494335 GT ./. chr1 237496871 . A . . LowGQX END=237496971 GT ./. chr1 237504898 . G . . LowGQX END=237504998 GT ./. chr1 237516098 . A . . LowGQX END=237516217 GT ./. chr1 237519185 . A . . LowGQX END=237519345 GT ./. chr1 237527595 . T . . LowGQX END=237527695 GT ./. chr1 237532780 . G . . LowGQX END=237532909 GT ./. chr1 237537966 . C . . LowGQX END=237538096 GT ./. chr1 237540622 . G . . LowGQX END=237540749 GT ./. chr1 237550541 . C . . LowGQX END=237550681 GT ./. chr1 237551355 . G . . LowGQX END=237551515 GT ./. chr1 237580316 . C . . LowGQX END=237580424 GT ./. chr1 237586391 . G . . LowGQX END=237586581 GT ./. chr1 237604608 . T . . LowGQX END=237604784 GT ./. chr1 237608700 . G . . LowGQX END=237608823 GT ./. chr1 237617690 . G . . LowGQX END=237617875 GT ./. chr1 237619899 . G . . LowGQX END=237620036 GT ./. chr1 237632360 . C . . LowGQX END=237632488 GT ./. chr1 237655095 . T . . LowGQX END=237655255 GT ./. chr1 237656253 . G . . LowGQX END=237656388 GT ./. chr1 237659810 . G . . LowGQX END=237660053 GT ./. chr1 237664010 . G . . LowGQX END=237664204 GT ./. chr1 237666588 . G . . LowGQX END=237666806 GT ./. chr1 237670009 . G . . LowGQX END=237670132 GT ./. chr1 237674950 . T . . LowGQX END=237675092 GT ./. chr1 237693719 . T . . LowGQX END=237693819 GT ./. chr1 237711730 . G . . LowGQX END=237711891 GT ./. chr1 237713833 . T . . LowGQX END=237713992 GT ./. chr1 237729866 . G . . LowGQX END=237730076 GT ./. chr1 237732444 . G . . LowGQX END=237732620 GT ./. chr1 237753092 . G . . LowGQX END=237753302 GT ./. chr1 237753939 . G . . LowGQX END=237754293 GT ./. chr1 237755016 . G . . LowGQX END=237755154 GT ./. chr1 237756775 . G . . LowGQX END=237756937 GT ./. chr1 237758787 . T . . LowGQX END=237758958 GT ./. chr1 237765318 . A . . LowGQX END=237765418 GT ./. chr1 237774061 . G . . LowGQX END=237774289 GT ./. chr1 237777338 . G . . LowGQX END=237778144 GT ./. chr1 237780585 . G . . LowGQX END=237780787 GT ./. chr1 237787064 . G . . LowGQX END=237787188 GT ./. chr1 237788960 . G . . LowGQX END=237789105 GT ./. chr1 237791106 . G . . LowGQX END=237791381 GT ./. chr1 237794694 . A . . LowGQX END=237794854 GT ./. chr1 237796877 . G . . LowGQX END=237797011 GT ./. chr1 237798151 . C . . LowGQX END=237798293 GT ./. chr1 237801616 . T . . LowGQX END=237801793 GT ./. chr1 237802314 . G . . LowGQX END=237802502 GT ./. chr1 237804160 . C . . LowGQX END=237804303 GT ./. chr1 237806626 . G . . LowGQX END=237806748 GT ./. chr1 237811743 . G . . LowGQX END=237811914 GT ./. chr1 237813176 . G . . LowGQX END=237813398 GT ./. chr1 237814666 . T . . LowGQX END=237814826 GT ./. chr1 237817573 . G . . LowGQX END=237817715 GT ./. chr1 237819110 . A . . LowGQX END=237819285 GT ./. chr1 237821173 . A . . LowGQX END=237821343 GT ./. chr1 237823224 . T . . LowGQX END=237823380 GT ./. chr1 237824099 . T . . LowGQX END=237824248 GT ./. chr1 237829761 . C . . LowGQX END=237829921 GT ./. chr1 237831112 . A . . LowGQX END=237831271 GT ./. chr1 237837395 . G . . LowGQX END=237837520 GT ./. chr1 237837999 . T . . LowGQX END=237838147 GT ./. chr1 237841330 . A . . LowGQX END=237841430 GT ./. chr1 237843755 . G . . LowGQX END=237843878 GT ./. chr1 237850704 . T . . LowGQX END=237850850 GT ./. chr1 237862245 . G . . LowGQX END=237862345 GT ./. chr1 237863528 . G . . LowGQX END=237863768 GT ./. chr1 237865277 . G . . LowGQX END=237865379 GT ./. chr1 237868512 . G . . LowGQX END=237868644 GT ./. chr1 237870248 . G . . LowGQX END=237870570 GT ./. chr1 237872157 . G . . LowGQX END=237872399 GT ./. chr1 237872734 . C . . LowGQX END=237872868 GT ./. chr1 237874994 . C . . LowGQX END=237875151 GT ./. chr1 237880497 . G . . LowGQX END=237880669 GT ./. chr1 237881742 . T . . LowGQX END=237881842 GT ./. chr1 237886427 . G . . LowGQX END=237886563 GT ./. chr1 237889501 . G . . LowGQX END=237889661 GT ./. chr1 237890353 . G . . LowGQX END=237890500 GT ./. chr1 237893538 . T . . LowGQX END=237893657 GT ./. chr1 237895345 . G . . LowGQX END=237895458 GT ./. chr1 237896951 . G . . LowGQX END=237897111 GT ./. chr1 237905525 . T . . LowGQX END=237905683 GT ./. chr1 237906862 . T . . LowGQX END=237906962 GT ./. chr1 237918339 . C . . LowGQX END=237918439 GT ./. chr1 237919548 . A . . LowGQX END=237919688 GT ./. chr1 237920977 . T . . LowGQX END=237921077 GT ./. chr1 237923024 . C . . LowGQX END=237923184 GT ./. chr1 237924202 . A . . LowGQX END=237924362 GT ./. chr1 237934067 . G . . LowGQX END=237934188 GT ./. chr1 237935251 . T . . LowGQX END=237935416 GT ./. chr1 237936819 . G . . LowGQX END=237936949 GT ./. chr1 237941965 . G . . LowGQX END=237942088 GT ./. chr1 237944846 . G . . LowGQX END=237944947 GT ./. chr1 237946974 . G . . LowGQX END=237948284 GT ./. chr1 237949213 . T . . LowGQX END=237949337 GT ./. chr1 237951287 . G . . LowGQX END=237951436 GT ./. chr1 237954712 . A . . LowGQX END=237954816 GT ./. chr1 237955404 . G . . LowGQX END=237955624 GT ./. chr1 237957136 . T . . LowGQX END=237957298 GT ./. chr1 237958520 . C . . LowGQX END=237958680 GT ./. chr1 237961306 . G . . LowGQX END=237961471 GT ./. chr1 237965146 . G . . LowGQX END=237965246 GT ./. chr1 237969436 . G . . LowGQX END=237969584 GT ./. chr1 237972190 . T . . LowGQX END=237972360 GT ./. chr1 237982335 . G . . LowGQX END=237982493 GT ./. chr1 237991663 . G . . LowGQX END=237991763 GT ./. chr1 237993800 . C . . LowGQX END=237993931 GT ./. chr1 237994780 . C . . LowGQX END=237994933 GT ./. chr1 237995851 . G . . LowGQX END=237995960 GT ./. chr1 238045670 . C . . LowGQX END=238045852 GT ./. chr1 238046040 . A . . LowGQX END=238046149 GT ./. chr1 238048059 . G . . LowGQX END=238048159 GT ./. chr1 238048463 . A . . LowGQX END=238048618 GT ./. chr1 238048689 . A . . LowGQX END=238048883 GT ./. chr1 238049054 . A . . LowGQX END=238049189 GT ./. chr1 238050069 . A . . LowGQX END=238050171 GT ./. chr1 238050672 . A . . LowGQX END=238050864 GT ./. chr1 238051656 . A . . LowGQX END=238051813 GT ./. chr1 238053165 . A . . LowGQX END=238053272 GT ./. chr1 238053353 . A . . LowGQX END=238053479 GT ./. chr1 238053759 . A . . LowGQX END=238053938 GT ./. chr1 240070750 . C . . LowGQX END=240072527 GT ./. chr1 240254968 . T . . LowGQX END=240257027 GT ./. chr1 240286477 . A . . LowGQX END=240286648 GT ./. chr1 240341219 . A . . LowGQX END=240341371 GT ./. chr1 240343425 . T . . LowGQX END=240343525 GT ./. chr1 240351485 . G . . LowGQX END=240351585 GT ./. chr1 240370097 . A . . LowGQX END=240372035 GT ./. chr1 240374389 . A . . LowGQX END=240374569 GT ./. chr1 240408814 . T . . LowGQX END=240408914 GT ./. chr1 240421173 . T . . LowGQX END=240421339 GT ./. chr1 240448506 . A . . LowGQX END=240448606 GT ./. chr1 240458102 . T . . LowGQX END=240458202 GT ./. chr1 240492372 . C . . LowGQX END=240492472 GT ./. chr1 240492637 . A . . LowGQX END=240492771 GT ./. chr1 240493871 . A . . LowGQX END=240494052 GT ./. chr1 240497167 . A . . LowGQX END=240497267 GT ./. chr1 240497407 . A . . LowGQX END=240497532 GT ./. chr1 240519113 . C . . LowGQX END=240519213 GT ./. chr1 240555787 . A . . LowGQX END=240555887 GT ./. chr1 240601359 . A . . LowGQX END=240601513 GT ./. chr1 240635601 . C . . LowGQX END=240635756 GT ./. chr1 240637336 . A . . LowGQX END=240637492 GT ./. chr1 240643302 . G . . LowGQX END=240643402 GT ./. chr1 240655470 . T . . LowGQX END=240655570 GT ./. chr1 240656267 . G . . LowGQX END=240656778 GT ./. chr1 240939412 . C . . LowGQX END=240939565 GT ./. chr1 240963934 . T . . LowGQX END=240964034 GT ./. chr1 240964704 . A . . LowGQX END=240964860 GT ./. chr1 240966153 . A . . LowGQX END=240966345 GT ./. chr1 240969389 . G . . LowGQX END=240969678 GT ./. chr1 240975167 . C . . LowGQX END=240975395 GT ./. chr1 240976867 . A . . LowGQX END=240977080 GT ./. chr1 240977965 . T . . LowGQX END=240978129 GT ./. chr1 240979566 . A . . LowGQX END=240979767 GT ./. chr1 240990347 . G . . LowGQX END=240990524 GT ./. chr1 241031836 . T . . LowGQX END=241032020 GT ./. chr1 241032024 . A . . LowGQX END=241032204 GT ./. chr1 241033304 . T . . LowGQX END=241033471 GT ./. chr1 241093953 . G . . LowGQX END=241094120 GT ./. chr1 241099849 . C . . LowGQX END=241100058 GT ./. chr1 241146328 . C . . LowGQX END=241146481 GT ./. chr1 241261915 . G . . LowGQX END=241262114 GT ./. chr1 241518948 . T . . LowGQX END=241519128 GT ./. chr1 241661077 . C . . LowGQX END=241661322 GT ./. chr1 241663686 . A . . LowGQX END=241663942 GT ./. chr1 241665692 . A . . LowGQX END=241665922 GT ./. chr1 241667291 . C . . LowGQX END=241667597 GT ./. chr1 241669252 . A . . LowGQX END=241669520 GT ./. chr1 241671852 . G . . LowGQX END=241672137 GT ./. chr1 241675216 . A . . LowGQX END=241675495 GT ./. chr1 241676852 . A . . LowGQX END=241677055 GT ./. chr1 241680431 . A . . LowGQX END=241680668 GT ./. chr1 241682840 . G . . LowGQX END=241683074 GT ./. chr1 241695625 . A . . LowGQX END=241695825 GT ./. chr1 241712114 . T . . LowGQX END=241712214 GT ./. chr1 241712975 . A . . LowGQX END=241713077 GT ./. chr1 241714250 . T . . LowGQX END=241714403 GT ./. chr1 241718887 . A . . LowGQX END=241718987 GT ./. chr1 241723959 . C . . LowGQX END=241724059 GT ./. chr1 241725465 . A . . LowGQX END=241725635 GT ./. chr1 241728273 . T . . LowGQX END=241728373 GT ./. chr1 241729789 . A . . LowGQX END=241729959 GT ./. chr1 241731768 . T . . LowGQX END=241731950 GT ./. chr1 241749823 . A . . LowGQX END=241749923 GT ./. chr1 241749960 . T . . LowGQX END=241750060 GT ./. chr1 241752042 . A . . LowGQX END=241752142 GT ./. chr1 241753312 . A . . LowGQX END=241753418 GT ./. chr1 241753504 . A . . LowGQX END=241753611 GT ./. chr1 241755253 . A . . LowGQX END=241755458 GT ./. chr1 241756633 . A . . LowGQX END=241756733 GT ./. chr1 241757728 . T . . LowGQX END=241757996 GT ./. chr1 241761046 . A . . LowGQX END=241761302 GT ./. chr1 241767560 . A . . LowGQX END=241767884 GT ./. chr1 241779147 . A . . LowGQX END=241779247 GT ./. chr1 241797085 . A . . LowGQX END=241799071 GT ./. chr1 241803182 . A . . LowGQX END=241803566 GT ./. chr1 241815786 . T . . LowGQX END=241815932 GT ./. chr1 241823831 . G . . LowGQX END=241823963 GT ./. chr1 241834375 . G . . LowGQX END=241834479 GT ./. chr1 241837945 . G . . LowGQX END=241838050 GT ./. chr1 241842786 . G . . LowGQX END=241842898 GT ./. chr1 241846788 . G . . LowGQX END=241847004 GT ./. chr1 241850712 . A . . LowGQX END=241850900 GT ./. chr1 241875094 . T . . LowGQX END=241875194 GT ./. chr1 241886597 . A . . LowGQX END=241886741 GT ./. chr1 241901663 . A . . LowGQX END=241901794 GT ./. chr1 241904816 . A . . LowGQX END=241904969 GT ./. chr1 241907693 . A . . LowGQX END=241907821 GT ./. chr1 241912847 . A . . LowGQX END=241913027 GT ./. chr1 241920583 . A . . LowGQX END=241920764 GT ./. chr1 241929518 . A . . LowGQX END=241929654 GT ./. chr1 241932705 . G . . LowGQX END=241932808 GT ./. chr1 241933908 . C . . LowGQX END=241934008 GT ./. chr1 241934931 . G . . LowGQX END=241935031 GT ./. chr1 241936093 . G . . LowGQX END=241936234 GT ./. chr1 241938406 . G . . LowGQX END=241938465;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 241938466 . G . . LowGQX END=241938498;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:6:60 chr1 241938499 . G . . LowGQX END=241938509;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:3:60 chr1 241938510 . T . 36.01 LowGQX DP=4;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:3:4:6.02:60:6 chr1 241938511 . G . . LowGQX END=241938513;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:6:60 chr1 241943226 . A . . LowGQX END=241943444 GT ./. chr1 241946522 . T . . LowGQX END=241946686 GT ./. chr1 241951149 . A . . LowGQX END=241951339 GT ./. chr1 241953891 . A . . LowGQX END=241954001 GT ./. chr1 241958500 . G . . LowGQX END=241958600 GT ./. chr1 241959557 . A . . LowGQX END=241959675 GT ./. chr1 241964426 . T . . LowGQX END=241964526 GT ./. chr1 242013677 . A . . LowGQX END=242013940 GT ./. chr1 242015543 . G . . LowGQX END=242015765 GT ./. chr1 242016609 . T . . LowGQX END=242016835 GT ./. chr1 242020596 . T . . LowGQX END=242020836 GT ./. chr1 242021757 . A . . LowGQX END=242022072 GT ./. chr1 242023768 . A . . LowGQX END=242024058 GT ./. chr1 242024657 . C . . LowGQX END=242024856 GT ./. chr1 242030081 . A . . LowGQX END=242030409 GT ./. chr1 242035283 . C . . LowGQX END=242035632 GT ./. chr1 242042000 . A . . LowGQX END=242042697 GT ./. chr1 242045167 . T . . LowGQX END=242045371 GT ./. chr1 242048565 . A . . LowGQX END=242048945 GT ./. chr1 242052716 . C . . LowGQX END=242052954 GT ./. chr1 242159463 . G . . LowGQX END=242159690 GT ./. chr1 242161760 . A . . LowGQX END=242161925 GT ./. chr1 242162056 . C . . LowGQX END=242162156 GT ./. chr1 242162232 . A . . LowGQX END=242162332 GT ./. chr1 242253154 . T . . LowGQX END=242253415 GT ./. chr1 242263968 . A . . LowGQX END=242264087 GT ./. chr1 242270971 . A . . LowGQX END=242271144 GT ./. chr1 242277190 . A . . LowGQX END=242277331 GT ./. chr1 242287768 . A . . LowGQX END=242287970 GT ./. chr1 242383288 . A . . LowGQX END=242383420 GT ./. chr1 242428587 . G . . LowGQX END=242428753 GT ./. chr1 242451642 . A . . LowGQX END=242451835 GT ./. chr1 242511399 . A . . LowGQX END=242511545 GT ./. chr1 242612607 . C . . LowGQX END=242612707 GT ./. chr1 242687378 . A . . LowGQX END=242687579 GT ./. chr1 243289381 . A . . LowGQX END=243289537 GT ./. chr1 243289750 . G . . LowGQX END=243290041 GT ./. chr1 243291527 . T . . LowGQX END=243291680 GT ./. chr1 243292659 . T . . LowGQX END=243292759 GT ./. chr1 243299374 . A . . LowGQX END=243299593 GT ./. chr1 243303238 . C . . LowGQX END=243303410 GT ./. chr1 243305560 . A . . LowGQX END=243305766 GT ./. chr1 243319522 . C . . LowGQX END=243319758 GT ./. chr1 243327585 . C . . LowGQX END=243329419 GT ./. chr1 243332841 . C . . LowGQX END=243333057 GT ./. chr1 243335998 . C . . LowGQX END=243336149 GT ./. chr1 243340050 . G . . LowGQX END=243340150 GT ./. chr1 243349080 . C . . LowGQX END=243349725 GT ./. chr1 243354319 . C . . LowGQX END=243354797 GT ./. chr1 243362361 . C . . LowGQX END=243362497 GT ./. chr1 243363768 . A . . LowGQX END=243363983 GT ./. chr1 243364058 . A . . LowGQX END=243364158 GT ./. chr1 243375033 . C . . LowGQX END=243375267 GT ./. chr1 243385021 . C . . LowGQX END=243385121 GT ./. chr1 243388477 . C . . LowGQX END=243388583 GT ./. chr1 243419425 . A . . LowGQX END=243419594 GT ./. chr1 243433356 . T . . LowGQX END=243433611 GT ./. chr1 243434229 . A . . LowGQX END=243434417 GT ./. chr1 243437794 . C . . LowGQX END=243438010 GT ./. chr1 243449523 . A . . LowGQX END=243449751 GT ./. chr1 243456342 . T . . LowGQX END=243456573 GT ./. chr1 243456699 . A . . LowGQX END=243456799 GT ./. chr1 243467964 . A . . LowGQX END=243468131 GT ./. chr1 243468314 . A . . LowGQX END=243468486 GT ./. chr1 243471240 . T . . LowGQX END=243471531 GT ./. chr1 243480006 . A . . LowGQX END=243480247 GT ./. chr1 243481296 . T . . LowGQX END=243481396 GT ./. chr1 243493791 . A . . LowGQX END=243494046 GT ./. chr1 243504290 . T . . LowGQX END=243504527 GT ./. chr1 243507466 . T . . LowGQX END=243507685 GT ./. chr1 243541972 . T . . LowGQX END=243542217 GT ./. chr1 243578953 . G . . LowGQX END=243579183 GT ./. chr1 243581219 . A . . LowGQX END=243581430 GT ./. chr1 243589678 . C . . LowGQX END=243589912 GT ./. chr1 243652265 . T . . LowGQX END=243652494 GT ./. chr1 243663001 . A . . LowGQX END=243663143 GT ./. chr1 243668544 . A . . LowGQX END=243668644 GT ./. chr1 243675624 . A . . LowGQX END=243675784 GT ./. chr1 243708806 . T . . LowGQX END=243708906 GT ./. chr1 243715994 . T . . LowGQX END=243716248 GT ./. chr1 243727020 . A . . LowGQX END=243727153 GT ./. chr1 243736226 . A . . LowGQX END=243736353 GT ./. chr1 243776958 . T . . LowGQX END=243777058 GT ./. chr1 243778326 . A . . LowGQX END=243778481 GT ./. chr1 243800911 . A . . LowGQX END=243801047 GT ./. chr1 243809193 . A . . LowGQX END=243809342 GT ./. chr1 243828022 . C . . LowGQX END=243828188 GT ./. chr1 243858891 . A . . LowGQX END=243859021 GT ./. chr1 244006390 . T . . LowGQX END=244006490 GT ./. chr1 244214691 . C . . LowGQX END=244214791 GT ./. chr1 244217088 . A . . LowGQX END=244218675 GT ./. chr1 244527981 . T . . LowGQX END=244528081 GT ./. chr1 244538672 . A . . LowGQX END=244538772 GT ./. chr1 244541767 . A . . LowGQX END=244541944 GT ./. chr1 244552251 . A . . LowGQX END=244552374 GT ./. chr1 244572865 . G . . LowGQX END=244572965 GT ./. chr1 244574587 . A . . LowGQX END=244574741 GT ./. chr1 244579281 . A . . LowGQX END=244579383 GT ./. chr1 244580928 . A . . LowGQX END=244581057 GT ./. chr1 244582060 . A . . LowGQX END=244582219 GT ./. chr1 244583470 . A . . LowGQX END=244583601 GT ./. chr1 244586128 . A . . LowGQX END=244586228 GT ./. chr1 244587253 . A . . LowGQX END=244587365 GT ./. chr1 244587607 . A . . LowGQX END=244587707 GT ./. chr1 244595823 . A . . LowGQX END=244595975 GT ./. chr1 244600112 . C . . LowGQX END=244600212 GT ./. chr1 244600966 . A . . LowGQX END=244601073 GT ./. chr1 244614935 . A . . LowGQX END=244615122 GT ./. chr1 244624633 . C . . LowGQX END=244624799 GT ./. chr1 244627185 . T . . LowGQX END=244627285 GT ./. chr1 244640830 . T . . LowGQX END=244640930 GT ./. chr1 244641193 . C . . LowGQX END=244641293 GT ./. chr1 244643003 . T . . LowGQX END=244643103 GT ./. chr1 244653712 . C . . LowGQX END=244653812 GT ./. chr1 244662293 . T . . LowGQX END=244662393 GT ./. chr1 244681838 . T . . LowGQX END=244682052 GT ./. chr1 244715622 . A . . LowGQX END=244716119 GT ./. chr1 244723968 . A . . LowGQX END=244724450 GT ./. chr1 244735630 . A . . LowGQX END=244736077 GT ./. chr1 244745026 . A . . LowGQX END=244745178 GT ./. chr1 244747154 . T . . LowGQX END=244747254 GT ./. chr1 244751761 . C . . LowGQX END=244751861 GT ./. chr1 244754959 . T . . LowGQX END=244755111 GT ./. chr1 244756664 . A . . LowGQX END=244756764 GT ./. chr1 244756791 . C . . LowGQX END=244756891 GT ./. chr1 244768995 . A . . LowGQX END=244769099 GT ./. chr1 244773540 . A . . LowGQX END=244773674 GT ./. chr1 244773750 . T . . LowGQX END=244773850 GT ./. chr1 244780830 . G . . LowGQX END=244781020 GT ./. chr1 244798767 . T . . LowGQX END=244798867 GT ./. chr1 244803199 . T . . LowGQX END=244803384 GT ./. chr1 244816527 . C . . LowGQX END=244816744 GT ./. chr1 244817232 . T . . LowGQX END=244817332 GT ./. chr1 244849886 . C . . LowGQX END=244849986 GT ./. chr1 244852548 . C . . LowGQX END=244852648 GT ./. chr1 244855179 . A . . LowGQX END=244855359 GT ./. chr1 244868856 . A . . LowGQX END=244869094 GT ./. chr1 244998928 . G . . LowGQX END=244999088 GT ./. chr1 244999755 . A . . LowGQX END=244999855 GT ./. chr1 245005244 . A . . LowGQX END=245005363 GT ./. chr1 245005479 . T . . LowGQX END=245005579 GT ./. chr1 245006341 . A . . LowGQX END=245006531 GT ./. chr1 245017660 . G . . LowGQX END=245017829 GT ./. chr1 245018261 . A . . LowGQX END=245018361 GT ./. chr1 245018724 . A . . LowGQX END=245018913 GT ./. chr1 245019204 . G . . LowGQX END=245019463 GT ./. chr1 245019757 . G . . LowGQX END=245019930 GT ./. chr1 245020028 . A . . LowGQX END=245020161 GT ./. chr1 245020898 . A . . LowGQX END=245021022 GT ./. chr1 245021311 . A . . LowGQX END=245021579 GT ./. chr1 245021979 . G . . LowGQX END=245022146 GT ./. chr1 245022575 . A . . LowGQX END=245022679 GT ./. chr1 245023635 . A . . LowGQX END=245023826 GT ./. chr1 245025750 . C . . LowGQX END=245025850 GT ./. chr1 245025919 . A . . LowGQX END=245026055 GT ./. chr1 245026917 . A . . LowGQX END=245027617 GT ./. chr1 245133354 . G . . LowGQX END=245133814 GT ./. chr1 245165422 . G . . LowGQX END=245165535 GT ./. chr1 245178970 . C . . LowGQX END=245179070 GT ./. chr1 245180537 . T . . LowGQX END=245180637 GT ./. chr1 245222616 . G . . LowGQX END=245222775 GT ./. chr1 245245375 . G . . LowGQX END=245245475 GT ./. chr1 245246716 . A . . LowGQX END=245246816 GT ./. chr1 245246872 . G . . LowGQX END=245247035 GT ./. chr1 245250015 . A . . LowGQX END=245250115 GT ./. chr1 245250495 . G . . LowGQX END=245250665 GT ./. chr1 245285126 . G . . LowGQX END=245285286 GT ./. chr1 245318656 . T . . LowGQX END=245318808 GT ./. chr1 245319572 . T . . LowGQX END=245319992 GT ./. chr1 245530135 . G . . LowGQX END=245530670 GT ./. chr1 245533873 . T . . LowGQX END=245533973 GT ./. chr1 245582880 . G . . LowGQX END=245583048 GT ./. chr1 245674369 . A . . LowGQX END=245674469 GT ./. chr1 245703836 . A . . LowGQX END=245703936 GT ./. chr1 245703953 . A . . LowGQX END=245704053 GT ./. chr1 245704068 . G . . LowGQX END=245704253 GT ./. chr1 245765878 . G . . LowGQX END=245766086 GT ./. chr1 245770950 . C . . LowGQX END=245771050 GT ./. chr1 245772567 . G . . LowGQX END=245772831 GT ./. chr1 245775094 . G . . LowGQX END=245775279 GT ./. chr1 245809422 . G . . LowGQX END=245809587 GT ./. chr1 245847534 . G . . LowGQX END=245847698 GT ./. chr1 245848706 . G . . LowGQX END=245850767 GT ./. chr1 245850768 . G . . LowGQX END=245850927;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr1 245850928 . A . . LowGQX END=245852110 GT ./. chr1 245861407 . G . . LowGQX END=245861611 GT ./. chr1 245862188 . G . . LowGQX END=245862340 GT ./. chr1 245865759 . G . . LowGQX END=245865909 GT ./. chr1 245912863 . C . . LowGQX END=245912969 GT ./. chr1 245927341 . A . . LowGQX END=245927454 GT ./. chr1 246021796 . G . . LowGQX END=246021975 GT ./. chr1 246027095 . G . . LowGQX END=246027195 GT ./. chr1 246078830 . A . . LowGQX END=246078945 GT ./. chr1 246091175 . A . . LowGQX END=246091338 GT ./. chr1 246093156 . G . . LowGQX END=246093256 GT ./. chr1 246093350 . T . . LowGQX END=246093450 GT ./. chr1 246110652 . G . . LowGQX END=246110752 GT ./. chr1 246489639 . G . . LowGQX END=246489739 GT ./. chr1 246490451 . A . . LowGQX END=246490642 GT ./. chr1 246493761 . T . . LowGQX END=246493861 GT ./. chr1 246498667 . A . . LowGQX END=246498779 GT ./. chr1 246518314 . T . . LowGQX END=246518414 GT ./. chr1 246670355 . C . . LowGQX END=246670520 GT ./. chr1 246704331 . T . . LowGQX END=246704507 GT ./. chr1 246707791 . A . . LowGQX END=246707986 GT ./. chr1 246711819 . A . . LowGQX END=246711919 GT ./. chr1 246714510 . C . . LowGQX END=246714610 GT ./. chr1 246719873 . A . . LowGQX END=246720063 GT ./. chr1 246720651 . A . . LowGQX END=246720839 GT ./. chr1 246727643 . T . . LowGQX END=246727743 GT ./. chr1 246729126 . A . . LowGQX END=246729443 GT ./. chr1 246754863 . T . . LowGQX END=246755246 GT ./. chr1 246784729 . A . . LowGQX END=246784939 GT ./. chr1 246795102 . A . . LowGQX END=246795262 GT ./. chr1 246797220 . A . . LowGQX END=246797320 GT ./. chr1 246797773 . A . . LowGQX END=246797892 GT ./. chr1 246804959 . A . . LowGQX END=246805112 GT ./. chr1 246805241 . A . . LowGQX END=246805342 GT ./. chr1 246810439 . A . . LowGQX END=246811355 GT ./. chr1 246823499 . A . . LowGQX END=246823639 GT ./. chr1 246829000 . A . . LowGQX END=246829210 GT ./. chr1 246887712 . C . . LowGQX END=246887933 GT ./. chr1 246890192 . A . . LowGQX END=246890309 GT ./. chr1 246899268 . T . . LowGQX END=246899368 GT ./. chr1 246903472 . A . . LowGQX END=246903606 GT ./. chr1 246907353 . T . . LowGQX END=246907453 GT ./. chr1 246921526 . A . . LowGQX END=246921661 GT ./. chr1 246922284 . G . . LowGQX END=246922456 GT ./. chr1 246923257 . A . . LowGQX END=246923381 GT ./. chr1 246923452 . A . . LowGQX END=246923552 GT ./. chr1 246927546 . A . . LowGQX END=246927662 GT ./. chr1 246929351 . T . . LowGQX END=246929451 GT ./. chr1 246930495 . A . . LowGQX END=246930605 GT ./. chr1 246939493 . C . . LowGQX END=246939593 GT ./. chr1 246939841 . C . . LowGQX END=246939987 GT ./. chr1 246940235 . C . . LowGQX END=246940343 GT ./. chr1 246940575 . C . . LowGQX END=246940743 GT ./. chr1 246942114 . C . . LowGQX END=246942250 GT ./. chr1 246943596 . C . . LowGQX END=246943827 GT ./. chr1 247004106 . A . . LowGQX END=247004306 GT ./. chr1 247005988 . A . . LowGQX END=247006088 GT ./. chr1 247007055 . T . . LowGQX END=247007233 GT ./. chr1 247012915 . A . . LowGQX END=247014747 GT ./. chr1 247016391 . A . . LowGQX END=247016604 GT ./. chr1 247019030 . A . . LowGQX END=247019132 GT ./. chr1 247020991 . A . . LowGQX END=247021119 GT ./. chr1 247024199 . A . . LowGQX END=247024600 GT ./. chr1 247025259 . A . . LowGQX END=247025458 GT ./. chr1 247027214 . G . . LowGQX END=247027421 GT ./. chr1 247030544 . A . . LowGQX END=247030656 GT ./. chr1 247030931 . A . . LowGQX END=247031116 GT ./. chr1 247039337 . A . . LowGQX END=247039492 GT ./. chr1 247040250 . A . . LowGQX END=247040386 GT ./. chr1 247040458 . A . . LowGQX END=247040607 GT ./. chr1 247048793 . A . . LowGQX END=247048985 GT ./. chr1 247050511 . A . . LowGQX END=247050662 GT ./. chr1 247051458 . G . . LowGQX END=247051558 GT ./. chr1 247051694 . A . . LowGQX END=247051822 GT ./. chr1 247053265 . T . . LowGQX END=247053365 GT ./. chr1 247054256 . A . . LowGQX END=247054416 GT ./. chr1 247055048 . T . . LowGQX END=247055259 GT ./. chr1 247057956 . C . . LowGQX END=247058056 GT ./. chr1 247059133 . T . . LowGQX END=247059233 GT ./. chr1 247061468 . T . . LowGQX END=247061641 GT ./. chr1 247062734 . A . . LowGQX END=247062834 GT ./. chr1 247063345 . G . . LowGQX END=247063551 GT ./. chr1 247063637 . A . . LowGQX END=247063817 GT ./. chr1 247065825 . A . . LowGQX END=247065980 GT ./. chr1 247067244 . C . . LowGQX END=247067344 GT ./. chr1 247068841 . A . . LowGQX END=247068962 GT ./. chr1 247070851 . A . . LowGQX END=247071063 GT ./. chr1 247076532 . A . . LowGQX END=247076717 GT ./. chr1 247079442 . A . . LowGQX END=247079700 GT ./. chr1 247081550 . A . . LowGQX END=247081680 GT ./. chr1 247094430 . C . . LowGQX END=247094530 GT ./. chr1 247094570 . C . . LowGQX END=247094670 GT ./. chr1 247109064 . T . . LowGQX END=247109164 GT ./. chr1 247130032 . A . . LowGQX END=247130192 GT ./. chr1 247130666 . C . . LowGQX END=247130766 GT ./. chr1 247130996 . C . . LowGQX END=247131096 GT ./. chr1 247143231 . G . . LowGQX END=247143331 GT ./. chr1 247150268 . C . . LowGQX END=247151558 GT ./. chr1 247159292 . A . . LowGQX END=247159484 GT ./. chr1 247162646 . C . . LowGQX END=247162746 GT ./. chr1 247163183 . A . . LowGQX END=247163377 GT ./. chr1 247171159 . T . . LowGQX END=247171259 GT ./. chr1 247200749 . T . . LowGQX END=247201732 GT ./. chr1 247202093 . T . . LowGQX END=247202193 GT ./. chr1 247202661 . C . . LowGQX END=247202842 GT ./. chr1 247241848 . T . . LowGQX END=247241948 GT ./. chr1 247263674 . G . . LowGQX END=247264624 GT ./. chr1 247265014 . T . . LowGQX END=247265114 GT ./. chr1 247265237 . T . . LowGQX END=247265418 GT ./. chr1 247267229 . T . . LowGQX END=247267504 GT ./. chr1 247274800 . G . . LowGQX END=247275529 GT ./. chr1 247287122 . G . . LowGQX END=247287222 GT ./. chr1 247319866 . C . . LowGQX END=247320807 GT ./. chr1 247322236 . T . . LowGQX END=247322389 GT ./. chr1 247322937 . A . . LowGQX END=247323118 GT ./. chr1 247335055 . C . . LowGQX END=247335215 GT ./. chr1 247419373 . G . . LowGQX END=247420448 GT ./. chr1 247463819 . G . . LowGQX END=247464581 GT ./. chr1 247467294 . C . . LowGQX END=247467394 GT ./. chr1 247471775 . A . . LowGQX END=247471893 GT ./. chr1 247472999 . A . . LowGQX END=247473111 GT ./. chr1 247473615 . T . . LowGQX END=247473761 GT ./. chr1 247485999 . C . . LowGQX END=247486108 GT ./. chr1 247486445 . A . . LowGQX END=247486545 GT ./. chr1 247491983 . A . . LowGQX END=247492171 GT ./. chr1 247492479 . T . . LowGQX END=247492894 GT ./. chr1 247582046 . C . . LowGQX END=247582431 GT ./. chr1 247586481 . A . . LowGQX END=247586703 GT ./. chr1 247587098 . C . . LowGQX END=247588954 GT ./. chr1 247592836 . T . . LowGQX END=247593109 GT ./. chr1 247597354 . T . . LowGQX END=247597627 GT ./. chr1 247599221 . G . . LowGQX END=247599494 GT ./. chr1 247607223 . A . . LowGQX END=247607496 GT ./. chr1 247607902 . C . . LowGQX END=247608175 GT ./. chr1 247611656 . T . . LowGQX END=247611858 GT ./. chr1 247614329 . C . . LowGQX END=247615287 GT ./. chr1 247654428 . T . . LowGQX END=247655395 GT ./. chr1 247690257 . G . . LowGQX END=247690357 GT ./. chr1 247694849 . C . . LowGQX END=247695814 GT ./. chr1 247701977 . G . . LowGQX END=247702094 GT ./. chr1 247712346 . G . . LowGQX END=247712534 GT ./. chr1 247719689 . T . . LowGQX END=247719789 GT ./. chr1 247726867 . C . . LowGQX END=247726967 GT ./. chr1 247729141 . T . . LowGQX END=247729298 GT ./. chr1 247737443 . A . . LowGQX END=247737687 GT ./. chr1 247751660 . A . . LowGQX END=247752618 GT ./. chr1 247768886 . G . . LowGQX END=247769820 GT ./. chr1 247835418 . T . . LowGQX END=247836346 GT ./. chr1 247875129 . A . . LowGQX END=247876060 GT ./. chr1 247886400 . G . . LowGQX END=247887346 GT ./. chr1 247901916 . T . . LowGQX END=247902862 GT ./. chr1 247920762 . C . . LowGQX END=247921711 GT ./. chr1 247978100 . T . . LowGQX END=247979034 GT ./. chr1 248004228 . A . . LowGQX END=248005201 GT ./. chr1 248020547 . T . . LowGQX END=248020976 GT ./. chr1 248023917 . A . . LowGQX END=248024017 GT ./. chr1 248028005 . A . . LowGQX END=248028240 GT ./. chr1 248031109 . A . . LowGQX END=248031209 GT ./. chr1 248031263 . A . . LowGQX END=248031368 GT ./. chr1 248039200 . A . . LowGQX END=248039794 GT ./. chr1 248058887 . A . . LowGQX END=248059836 GT ./. chr1 248084318 . T . . LowGQX END=248085261 GT ./. chr1 248097070 . G . . LowGQX END=248098058 GT ./. chr1 248112158 . C . . LowGQX END=248113101 GT ./. chr1 248128632 . A . . LowGQX END=248129652 GT ./. chr1 248153813 . A . . LowGQX END=248154494 GT ./. chr1 248185249 . C . . LowGQX END=248186189 GT ./. chr1 248201568 . C . . LowGQX END=248202511 GT ./. chr1 248223982 . C . . LowGQX END=248224925 GT ./. chr1 248262676 . T . . LowGQX END=248263619 GT ./. chr1 248285438 . A . . LowGQX END=248286083 GT ./. chr1 248308448 . T . . LowGQX END=248309391 GT ./. chr1 248343286 . T . . LowGQX END=248344334 GT ./. chr1 248366368 . T . . LowGQX END=248367311 GT ./. chr1 248402229 . G . . LowGQX END=248403169 GT ./. chr1 248436152 . G . . LowGQX END=248437119 GT ./. chr1 248457916 . G . . LowGQX END=248458883 GT ./. chr1 248486930 . A . . LowGQX END=248487873 GT ./. chr1 248512075 . C . . LowGQX END=248513018 GT ./. chr1 248524881 . T . . LowGQX END=248525932 GT ./. chr1 248550908 . C . . LowGQX END=248551839 GT ./. chr1 248569294 . C . . LowGQX END=248570408 GT ./. chr1 248616097 . C . . LowGQX END=248617076 GT ./. chr1 248636639 . A . . LowGQX END=248637616 GT ./. chr1 248651877 . T . . LowGQX END=248652840 GT ./. chr1 248684946 . A . . LowGQX END=248685901 GT ./. chr1 248721833 . C . . LowGQX END=248722793 GT ./. chr1 248737089 . T . . LowGQX END=248738064 GT ./. chr1 248756129 . C . . LowGQX END=248757072 GT ./. chr1 248789477 . C . . LowGQX END=248790432 GT ./. chr1 248801516 . C . . LowGQX END=248802626 GT ./. chr1 248813219 . A . . LowGQX END=248814188 GT ./. chr1 248844668 . T . . LowGQX END=248845608 GT ./. chr1 248902911 . C . . LowGQX END=248903152 GT ./. chr1 249106097 . G . . LowGQX END=249106572 GT ./. chr1 249107186 . A . . LowGQX END=249107364 GT ./. chr1 249108646 . A . . LowGQX END=249108864 GT ./. chr1 249108869 . C . . LowGQX END=249108969 GT ./. chr1 249110731 . A . . LowGQX END=249110864 GT ./. chr1 249111003 . A . . LowGQX END=249111103 GT ./. chr1 249111177 . C . . LowGQX END=249111277 GT ./. chr1 249118950 . A . . LowGQX END=249119137 GT ./. chr1 249141472 . C . . LowGQX END=249142835 GT ./. chr1 249143023 . C . . LowGQX END=249143315 GT ./. chr1 249144407 . G . . LowGQX END=249144718 GT ./. chr1 249144879 . A . . LowGQX END=249144983 GT ./. chr1 249145077 . T . . LowGQX END=249145177 GT ./. chr1 249148134 . A . . LowGQX END=249148253 GT ./. chr1 249149569 . T . . LowGQX END=249149669 GT ./. chr1 249149755 . A . . LowGQX END=249149882 GT ./. chr1 249149922 . A . . LowGQX END=249150148 GT ./. chr1 249150482 . C . . LowGQX END=249150624 GT ./. chr1 249150688 . T . . LowGQX END=249150788 GT ./. chr1 249151431 . A . . LowGQX END=249151699 GT ./. chr1 249151993 . C . . LowGQX END=249152093 GT ./. chr1 249152152 . G . . LowGQX END=249152265 GT ./. chr1 249152328 . A . . LowGQX END=249152521 GT ./. chr1 249152662 . A . . LowGQX END=249152762 GT ./. chr1 249208021 . A . . LowGQX END=249208121 GT ./. chr1 249208705 . A . . LowGQX END=249208805 GT ./. chr1 249210799 . A . . LowGQX END=249212565 GT ./. chr2 41568 . G . . LowGQX END=41668 GT ./. chr2 45438 . A . . LowGQX END=46395 GT ./. chr2 218809 . C . . LowGQX END=219004 GT ./. chr2 224843 . C . . LowGQX END=224943 GT ./. chr2 229925 . C . . LowGQX END=230047 GT ./. chr2 230972 . C . . LowGQX END=231194 GT ./. chr2 233099 . A . . LowGQX END=233232 GT ./. chr2 234158 . A . . LowGQX END=234275 GT ./. chr2 242739 . A . . LowGQX END=242839 GT ./. chr2 243486 . A . . LowGQX END=243586 GT ./. chr2 247520 . C . . LowGQX END=247620 GT ./. chr2 249730 . C . . LowGQX END=249845 GT ./. chr2 253004 . C . . LowGQX END=253116 GT ./. chr2 262581 . G . . LowGQX END=262681 GT ./. chr2 263874 . A . . LowGQX END=264034 GT ./. chr2 264937 . G . . LowGQX END=265037 GT ./. chr2 269275 . G . . LowGQX END=269375 GT ./. chr2 271853 . C . . LowGQX END=271953 GT ./. chr2 272035 . A . . LowGQX END=272333 GT ./. chr2 275121 . A . . LowGQX END=275221 GT ./. chr2 276978 . A . . LowGQX END=277088 GT ./. chr2 277216 . T . . LowGQX END=277316 GT ./. chr2 280100 . C . . LowGQX END=280200 GT ./. chr2 283093 . G . . LowGQX END=283193 GT ./. chr2 286113 . T . . LowGQX END=286213 GT ./. chr2 286267 . T . . LowGQX END=286367 GT ./. chr2 287571 . G . . LowGQX END=287841 GT ./. chr2 669578 . C . . LowGQX END=669688 GT ./. chr2 669695 . A . . LowGQX END=669854 GT ./. chr2 672726 . C . . LowGQX END=672946 GT ./. chr2 675508 . A . . LowGQX END=675633 GT ./. chr2 675717 . G . . LowGQX END=675817 GT ./. chr2 676098 . G . . LowGQX END=676239 GT ./. chr2 676557 . C . . LowGQX END=676657 GT ./. chr2 677208 . A . . LowGQX END=677368 GT ./. chr2 905287 . T . . LowGQX END=905946 GT ./. chr2 946609 . C . . LowGQX END=946769 GT ./. chr2 1079203 . G . . LowGQX END=1079342 GT ./. chr2 1093860 . T . . LowGQX END=1093960 GT ./. chr2 1094018 . T . . LowGQX END=1094118 GT ./. chr2 1099000 . T . . LowGQX END=1099160 GT ./. chr2 1133227 . C . . LowGQX END=1133380 GT ./. chr2 1133425 . T . . LowGQX END=1133525 GT ./. chr2 1161173 . T . . LowGQX END=1161328 GT ./. chr2 1168774 . G . . LowGQX END=1168874 GT ./. chr2 1204788 . G . . LowGQX END=1204917 GT ./. chr2 1241659 . G . . LowGQX END=1241790 GT ./. chr2 1243479 . T . . LowGQX END=1243579 GT ./. chr2 1251098 . G . . LowGQX END=1251216 GT ./. chr2 1263128 . T . . LowGQX END=1263228 GT ./. chr2 1271136 . G . . LowGQX END=1271344 GT ./. chr2 1312262 . C . . LowGQX END=1312362 GT ./. chr2 1320036 . G . . LowGQX END=1320148 GT ./. chr2 1371114 . G . . LowGQX END=1371247 GT ./. chr2 1418130 . G . . LowGQX END=1418326 GT ./. chr2 1426766 . G . . LowGQX END=1426953 GT ./. chr2 1437159 . A . . LowGQX END=1437431 GT ./. chr2 1439973 . G . . LowGQX END=1440208 GT ./. chr2 1442559 . T . . LowGQX END=1442659 GT ./. chr2 1457415 . T . . LowGQX END=1457647 GT ./. chr2 1459797 . T . . LowGQX END=1460106 GT ./. chr2 1480807 . C . . LowGQX END=1481428 GT ./. chr2 1488317 . C . . LowGQX END=1488678 GT ./. chr2 1491542 . C . . LowGQX END=1491815 GT ./. chr2 1497523 . A . . LowGQX END=1497863 GT ./. chr2 1499710 . C . . LowGQX END=1500021 GT ./. chr2 1500316 . G . . LowGQX END=1500589 GT ./. chr2 1507524 . C . . LowGQX END=1507624 GT ./. chr2 1507669 . A . . LowGQX END=1507903 GT ./. chr2 1520604 . T . . LowGQX END=1520806 GT ./. chr2 1544315 . C . . LowGQX END=1544685 GT ./. chr2 1546140 . A . . LowGQX END=1546365 GT ./. chr2 1637965 . C . . LowGQX END=1638096 GT ./. chr2 1639147 . T . . LowGQX END=1639344 GT ./. chr2 1642607 . A . . LowGQX END=1642751 GT ./. chr2 1643073 . C . . LowGQX END=1643195 GT ./. chr2 1647139 . C . . LowGQX END=1647349 GT ./. chr2 1648389 . C . . LowGQX END=1648525 GT ./. chr2 1651943 . C . . LowGQX END=1653455 GT ./. chr2 1657310 . G . . LowGQX END=1657558 GT ./. chr2 1658166 . C . . LowGQX END=1658281 GT ./. chr2 1664652 . C . . LowGQX END=1664810 GT ./. chr2 1665843 . C . . LowGQX END=1665970 GT ./. chr2 1667376 . C . . LowGQX END=1667536 GT ./. chr2 1668729 . C . . LowGQX END=1668858 GT ./. chr2 1669985 . C . . LowGQX END=1670259 GT ./. chr2 1677414 . C . . LowGQX END=1677585 GT ./. chr2 1680668 . A . . LowGQX END=1680817 GT ./. chr2 1683964 . C . . LowGQX END=1684135 GT ./. chr2 1687404 . A . . LowGQX END=1687557 GT ./. chr2 1687798 . T . . LowGQX END=1687958 GT ./. chr2 1691400 . T . . LowGQX END=1691500 GT ./. chr2 1695646 . T . . LowGQX END=1695806 GT ./. chr2 1696272 . T . . LowGQX END=1696372 GT ./. chr2 1696791 . A . . LowGQX END=1696907 GT ./. chr2 1748027 . C . . LowGQX END=1748236 GT ./. chr2 1794963 . A . . LowGQX END=1795063 GT ./. chr2 1795638 . T . . LowGQX END=1795780 GT ./. chr2 1796092 . C . . LowGQX END=1796237 GT ./. chr2 1805461 . C . . LowGQX END=1805572 GT ./. chr2 1812844 . T . . LowGQX END=1812944 GT ./. chr2 1842920 . C . . LowGQX END=1843143 GT ./. chr2 1844524 . G . . LowGQX END=1844624 GT ./. chr2 1855394 . G . . LowGQX END=1855494 GT ./. chr2 1890295 . T . . LowGQX END=1890395 GT ./. chr2 1891259 . C . . LowGQX END=1891382 GT ./. chr2 1893012 . C . . LowGQX END=1893250 GT ./. chr2 1895808 . C . . LowGQX END=1896060 GT ./. chr2 1906851 . C . . LowGQX END=1907067 GT ./. chr2 1914011 . C . . LowGQX END=1914120 GT ./. chr2 1915787 . C . . LowGQX END=1915887 GT ./. chr2 1920976 . C . . LowGQX END=1921112 GT ./. chr2 1926057 . C . . LowGQX END=1927036 GT ./. chr2 1946753 . C . . LowGQX END=1947107 GT ./. chr2 1982918 . A . . LowGQX END=1983018 GT ./. chr2 1983260 . A . . LowGQX END=1983360 GT ./. chr2 1983472 . G . . LowGQX END=1983572 GT ./. chr2 3193103 . A . . LowGQX END=3193282 GT ./. chr2 3196183 . A . . LowGQX END=3196373 GT ./. chr2 3197768 . A . . LowGQX END=3197940 GT ./. chr2 3200650 . A . . LowGQX END=3200791 GT ./. chr2 3212299 . A . . LowGQX END=3212729 GT ./. chr2 3217918 . A . . LowGQX END=3218022 GT ./. chr2 3261068 . A . . LowGQX END=3261229 GT ./. chr2 3278100 . A . . LowGQX END=3278200 GT ./. chr2 3322628 . C . . LowGQX END=3322730 GT ./. chr2 3341786 . A . . LowGQX END=3341976 GT ./. chr2 3356977 . C . . LowGQX END=3357095 GT ./. chr2 3358313 . A . . LowGQX END=3358413 GT ./. chr2 3381390 . C . . LowGQX END=3381490 GT ./. chr2 3391393 . T . . LowGQX END=3392444 GT ./. chr2 3393454 . G . . LowGQX END=3393554 GT ./. chr2 3405546 . A . . LowGQX END=3405667 GT ./. chr2 3425423 . G . . LowGQX END=3425523 GT ./. chr2 3425650 . A . . LowGQX END=3425768 GT ./. chr2 3428254 . A . . LowGQX END=3428437 GT ./. chr2 3447497 . A . . LowGQX END=3447665 GT ./. chr2 3460826 . T . . LowGQX END=3460986 GT ./. chr2 3461319 . A . . LowGQX END=3461479 GT ./. chr2 3463944 . G . . LowGQX END=3464113 GT ./. chr2 3466629 . C . . LowGQX END=3466758 GT ./. chr2 3469366 . A . . LowGQX END=3469480 GT ./. chr2 3470025 . G . . LowGQX END=3470165 GT ./. chr2 3481413 . A . . LowGQX END=3481569 GT ./. chr2 3482611 . T . . LowGQX END=3482711 GT ./. chr2 3482988 . A . . LowGQX END=3483235 GT ./. chr2 3488490 . G . . LowGQX END=3488650 GT ./. chr2 3502732 . T . . LowGQX END=3502902 GT ./. chr2 3504356 . C . . LowGQX END=3504767 GT ./. chr2 3517626 . A . . LowGQX END=3517750 GT ./. chr2 3518527 . T . . LowGQX END=3518681 GT ./. chr2 3523096 . G . . LowGQX END=3523261 GT ./. chr2 3579845 . C . . LowGQX END=3579945 GT ./. chr2 3593369 . C . . LowGQX END=3593469 GT ./. chr2 3595519 . A . . LowGQX END=3595648 GT ./. chr2 3596223 . A . . LowGQX END=3596323 GT ./. chr2 3596626 . T . . LowGQX END=3596726 GT ./. chr2 3597961 . A . . LowGQX END=3598065 GT ./. chr2 3599732 . A . . LowGQX END=3599901 GT ./. chr2 3604377 . A . . LowGQX END=3604497 GT ./. chr2 3605384 . T . . LowGQX END=3605484 GT ./. chr2 3605681 . C . . LowGQX END=3605901 GT ./. chr2 3623147 . C . . LowGQX END=3623326 GT ./. chr2 3623356 . G . . LowGQX END=3623530 GT ./. chr2 3624026 . C . . LowGQX END=3624295 GT ./. chr2 3625249 . T . . LowGQX END=3625416 GT ./. chr2 3627649 . C . . LowGQX END=3627929 GT ./. chr2 3628344 . A . . LowGQX END=3628524 GT ./. chr2 3642421 . C . . LowGQX END=3642759 GT ./. chr2 3651194 . A . . LowGQX END=3651294 GT ./. chr2 3651904 . G . . LowGQX END=3652112 GT ./. chr2 3652600 . A . . LowGQX END=3652700 GT ./. chr2 3653728 . A . . LowGQX END=3653834 GT ./. chr2 3660847 . T . . LowGQX END=3661024 GT ./. chr2 3673553 . A . . LowGQX END=3673734 GT ./. chr2 3685072 . C . . LowGQX END=3685246 GT ./. chr2 3687805 . T . . LowGQX END=3687973 GT ./. chr2 3688790 . G . . LowGQX END=3689023 GT ./. chr2 3690983 . G . . LowGQX END=3691181 GT ./. chr2 3691266 . T . . LowGQX END=3692235 GT ./. chr2 3718714 . A . . LowGQX END=3718814 GT ./. chr2 3721640 . T . . LowGQX END=3721794 GT ./. chr2 3726052 . C . . LowGQX END=3726152 GT ./. chr2 3727458 . G . . LowGQX END=3727585 GT ./. chr2 3729214 . C . . LowGQX END=3729314 GT ./. chr2 3730531 . G . . LowGQX END=3730665 GT ./. chr2 3743276 . A . . LowGQX END=3743463 GT ./. chr2 3743852 . T . . LowGQX END=3743952 GT ./. chr2 3744937 . G . . LowGQX END=3745047 GT ./. chr2 3749101 . G . . LowGQX END=3749227 GT ./. chr2 3749952 . G . . LowGQX END=3750154 GT ./. chr2 3751442 . T . . LowGQX END=3751629 GT ./. chr2 3756115 . G . . LowGQX END=3756215 GT ./. chr2 3774582 . T . . LowGQX END=3774682 GT ./. chr2 3789510 . T . . LowGQX END=3789639 GT ./. chr2 3800139 . A . . LowGQX END=3800239 GT ./. chr2 3800352 . G . . LowGQX END=3800491 GT ./. chr2 3802153 . T . . LowGQX END=3802253 GT ./. chr2 3815302 . C . . LowGQX END=3815471 GT ./. chr2 3816900 . G . . LowGQX END=3817002 GT ./. chr2 3826382 . A . . LowGQX END=3826482 GT ./. chr2 4135932 . A . . LowGQX END=4136032 GT ./. chr2 5832852 . T . . LowGQX END=5834182 GT ./. chr2 6980700 . G . . LowGQX END=6980810 GT ./. chr2 6989929 . G . . LowGQX END=6990107 GT ./. chr2 6991576 . C . . LowGQX END=6991817 GT ./. chr2 7001313 . A . . LowGQX END=7001519 GT ./. chr2 7003593 . A . . LowGQX END=7003712 GT ./. chr2 7005151 . A . . LowGQX END=7005830 GT ./. chr2 7006004 . C . . LowGQX END=7006177 GT ./. chr2 7017930 . C . . LowGQX END=7018280 GT ./. chr2 7019110 . C . . LowGQX END=7019210 GT ./. chr2 7023500 . A . . LowGQX END=7023666 GT ./. chr2 7027064 . A . . LowGQX END=7027298 GT ./. chr2 7030305 . A . . LowGQX END=7030459 GT ./. chr2 7033769 . G . . LowGQX END=7033869 GT ./. chr2 7035907 . A . . LowGQX END=7036076 GT ./. chr2 7137056 . C . . LowGQX END=7137195 GT ./. chr2 7154528 . T . . LowGQX END=7154692 GT ./. chr2 7154824 . G . . LowGQX END=7154924 GT ./. chr2 7160602 . A . . LowGQX END=7160814 GT ./. chr2 7164498 . A . . LowGQX END=7164650 GT ./. chr2 7170252 . C . . LowGQX END=7170352 GT ./. chr2 7179758 . A . . LowGQX END=7179894 GT ./. chr2 7208326 . G . . LowGQX END=7208426 GT ./. chr2 7540646 . C . . LowGQX END=7540746 GT ./. chr2 8178686 . A . . LowGQX END=8178786 GT ./. chr2 8822294 . G . . LowGQX END=8822646 GT ./. chr2 8822952 . C . . LowGQX END=8823052 GT ./. chr2 8866998 . A . . LowGQX END=8867098 GT ./. chr2 8870848 . T . . LowGQX END=8872115 GT ./. chr2 8873572 . A . . LowGQX END=8873813 GT ./. chr2 8874783 . A . . LowGQX END=8874886 GT ./. chr2 8876996 . A . . LowGQX END=8877132 GT ./. chr2 8887254 . A . . LowGQX END=8887354 GT ./. chr2 8888015 . A . . LowGQX END=8888133 GT ./. chr2 8889495 . A . . LowGQX END=8889595 GT ./. chr2 8890240 . A . . LowGQX END=8890468 GT ./. chr2 8891574 . T . . LowGQX END=8891777 GT ./. chr2 8897827 . T . . LowGQX END=8897927 GT ./. chr2 8910798 . A . . LowGQX END=8910965 GT ./. chr2 8916876 . A . . LowGQX END=8917025 GT ./. chr2 8918764 . C . . LowGQX END=8918864 GT ./. chr2 8919024 . A . . LowGQX END=8919272 GT ./. chr2 8919802 . A . . LowGQX END=8919947 GT ./. chr2 8925869 . A . . LowGQX END=8926163 GT ./. chr2 8926334 . A . . LowGQX END=8926490 GT ./. chr2 8928775 . A . . LowGQX END=8928945 GT ./. chr2 8929988 . A . . LowGQX END=8930192 GT ./. chr2 8931188 . A . . LowGQX END=8931357 GT ./. chr2 8933938 . A . . LowGQX END=8934120 GT ./. chr2 8936899 . A . . LowGQX END=8937002 GT ./. chr2 8938330 . A . . LowGQX END=8938433 GT ./. chr2 8940528 . A . . LowGQX END=8940631 GT ./. chr2 8943058 . A . . LowGQX END=8943260 GT ./. chr2 8946399 . A . . LowGQX END=8946502 GT ./. chr2 8952523 . A . . LowGQX END=8952627 GT ./. chr2 8953365 . A . . LowGQX END=8953468 GT ./. chr2 8957746 . A . . LowGQX END=8957849 GT ./. chr2 8958823 . A . . LowGQX END=8958926 GT ./. chr2 8967114 . A . . LowGQX END=8967226 GT ./. chr2 8998807 . G . . LowGQX END=8999037 GT ./. chr2 9000701 . T . . LowGQX END=9000897 GT ./. chr2 9002393 . A . . LowGQX END=9002493 GT ./. chr2 9002718 . A . . LowGQX END=9002855 GT ./. chr2 9004283 . T . . LowGQX END=9004383 GT ./. chr2 9008574 . A . . LowGQX END=9008682 GT ./. chr2 9013236 . A . . LowGQX END=9013433 GT ./. chr2 9017158 . A . . LowGQX END=9017346 GT ./. chr2 9022619 . A . . LowGQX END=9022719 GT ./. chr2 9028066 . A . . LowGQX END=9028226 GT ./. chr2 9048749 . A . . LowGQX END=9048849 GT ./. chr2 9083305 . T . . LowGQX END=9083405 GT ./. chr2 9098624 . A . . LowGQX END=9098774 GT ./. chr2 9114477 . A . . LowGQX END=9114577 GT ./. chr2 9143596 . C . . LowGQX END=9143757 GT ./. chr2 9347232 . C . . LowGQX END=9347402 GT ./. chr2 9419433 . C . . LowGQX END=9419533 GT ./. chr2 9437427 . A . . LowGQX END=9437577 GT ./. chr2 9458581 . A . . LowGQX END=9458741 GT ./. chr2 9460325 . G . . LowGQX END=9460492 GT ./. chr2 9463248 . A . . LowGQX END=9463382 GT ./. chr2 9467893 . A . . LowGQX END=9468048 GT ./. chr2 9474855 . T . . LowGQX END=9474955 GT ./. chr2 9475216 . T . . LowGQX END=9475316 GT ./. chr2 9484659 . A . . LowGQX END=9484767 GT ./. chr2 9484845 . C . . LowGQX END=9484945 GT ./. chr2 9490931 . A . . LowGQX END=9491031 GT ./. chr2 9496151 . A . . LowGQX END=9496251 GT ./. chr2 9496306 . A . . LowGQX END=9496477 GT ./. chr2 9498883 . A . . LowGQX END=9499021 GT ./. chr2 9508552 . A . . LowGQX END=9508652 GT ./. chr2 9514882 . A . . LowGQX END=9515076 GT ./. chr2 9517030 . T . . LowGQX END=9517130 GT ./. chr2 9519071 . A . . LowGQX END=9519191 GT ./. chr2 9520794 . T . . LowGQX END=9520954 GT ./. chr2 9525372 . A . . LowGQX END=9525490 GT ./. chr2 9528411 . G . . LowGQX END=9528681 GT ./. chr2 9531158 . T . . LowGQX END=9531328 GT ./. chr2 9533609 . A . . LowGQX END=9533799 GT ./. chr2 9540127 . A . . LowGQX END=9540227 GT ./. chr2 9540866 . T . . LowGQX END=9540966 GT ./. chr2 9541401 . A . . LowGQX END=9541528 GT ./. chr2 9543370 . T . . LowGQX END=9543470 GT ./. chr2 9546949 . C . . LowGQX END=9547049 GT ./. chr2 9547553 . G . . LowGQX END=9547730 GT ./. chr2 9548239 . T . . LowGQX END=9548339 GT ./. chr2 9552335 . A . . LowGQX END=9552537 GT ./. chr2 9554297 . T . . LowGQX END=9554397 GT ./. chr2 9558741 . T . . LowGQX END=9558841 GT ./. chr2 9563402 . C . . LowGQX END=9563562 GT ./. chr2 9563878 . C . . LowGQX END=9563978 GT ./. chr2 9568876 . C . . LowGQX END=9568976 GT ./. chr2 9569990 . T . . LowGQX END=9570152 GT ./. chr2 9570879 . A . . LowGQX END=9571012 GT ./. chr2 9572638 . A . . LowGQX END=9572820 GT ./. chr2 9573995 . C . . LowGQX END=9574095 GT ./. chr2 9576338 . A . . LowGQX END=9576493 GT ./. chr2 9580618 . A . . LowGQX END=9580798 GT ./. chr2 9581945 . A . . LowGQX END=9582108 GT ./. chr2 9583642 . A . . LowGQX END=9583793 GT ./. chr2 9588325 . A . . LowGQX END=9588482 GT ./. chr2 9593040 . A . . LowGQX END=9593153 GT ./. chr2 9595786 . A . . LowGQX END=9595889 GT ./. chr2 9597060 . A . . LowGQX END=9597160 GT ./. chr2 9599597 . T . . LowGQX END=9599754 GT ./. chr2 9607821 . T . . LowGQX END=9607921 GT ./. chr2 9611470 . A . . LowGQX END=9611571 GT ./. chr2 9612986 . T . . LowGQX END=9613149 GT ./. chr2 9614627 . C . . LowGQX END=9614844 GT ./. chr2 9615294 . G . . LowGQX END=9615394 GT ./. chr2 9616093 . A . . LowGQX END=9616193 GT ./. chr2 9618349 . A . . LowGQX END=9618502 GT ./. chr2 9621413 . A . . LowGQX END=9621579 GT ./. chr2 9624559 . A . . LowGQX END=9624682 GT ./. chr2 9628274 . A . . LowGQX END=9628461 GT ./. chr2 9630304 . A . . LowGQX END=9630650 GT ./. chr2 9631206 . G . . LowGQX END=9631306 GT ./. chr2 9633022 . C . . LowGQX END=9633122 GT ./. chr2 9633866 . A . . LowGQX END=9633966 GT ./. chr2 9634764 . A . . LowGQX END=9634899 GT ./. chr2 9637241 . A . . LowGQX END=9637380 GT ./. chr2 9642300 . A . . LowGQX END=9642408 GT ./. chr2 9645293 . A . . LowGQX END=9645497 GT ./. chr2 9650106 . A . . LowGQX END=9650263 GT ./. chr2 9658025 . C . . LowGQX END=9658125 GT ./. chr2 9658230 . A . . LowGQX END=9658379 GT ./. chr2 9661330 . A . . LowGQX END=9661448 GT ./. chr2 9662510 . A . . LowGQX END=9662610 GT ./. chr2 9663376 . A . . LowGQX END=9663478 GT ./. chr2 9666238 . A . . LowGQX END=9666394 GT ./. chr2 9667904 . T . . LowGQX END=9668086 GT ./. chr2 9675958 . T . . LowGQX END=9676058 GT ./. chr2 9676825 . A . . LowGQX END=9676960 GT ./. chr2 9683280 . A . . LowGQX END=9683368 GT ./. chr2 9683369 . G . . LowGQX END=9683417;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 9695636 . A . . LowGQX END=9695737 GT ./. chr2 9725395 . G . . LowGQX END=9725495 GT ./. chr2 9727481 . A . . LowGQX END=9727641 GT ./. chr2 9728292 . A . . LowGQX END=9728482 GT ./. chr2 9731519 . A . . LowGQX END=9731647 GT ./. chr2 9770286 . A . . LowGQX END=9770584 GT ./. chr2 9983570 . G . . LowGQX END=9983730 GT ./. chr2 9985347 . A . . LowGQX END=9985450 GT ./. chr2 9986163 . G . . LowGQX END=9986263 GT ./. chr2 9989440 . G . . LowGQX END=9989596 GT ./. chr2 9991668 . A . . LowGQX END=9991770 GT ./. chr2 9992062 . C . . LowGQX END=9992162 GT ./. chr2 9994453 . A . . LowGQX END=9994553 GT ./. chr2 10008373 . C . . LowGQX END=10008561 GT ./. chr2 10008746 . A . . LowGQX END=10008846 GT ./. chr2 10015992 . A . . LowGQX END=10016150 GT ./. chr2 10022833 . A . . LowGQX END=10022937 GT ./. chr2 10044956 . T . . LowGQX END=10045138 GT ./. chr2 10050863 . A . . LowGQX END=10051063 GT ./. chr2 10051558 . C . . LowGQX END=10051714 GT ./. chr2 10053286 . A . . LowGQX END=10053443 GT ./. chr2 10059156 . T . . LowGQX END=10059256 GT ./. chr2 10059725 . A . . LowGQX END=10059954 GT ./. chr2 10073910 . A . . LowGQX END=10074116 GT ./. chr2 10085297 . G . . LowGQX END=10085397 GT ./. chr2 10091863 . C . . LowGQX END=10092023 GT ./. chr2 10093126 . A . . LowGQX END=10093226 GT ./. chr2 10094954 . T . . LowGQX END=10095231 GT ./. chr2 10098901 . T . . LowGQX END=10099001 GT ./. chr2 10101174 . G . . LowGQX END=10101568 GT ./. chr2 10102572 . T . . LowGQX END=10102672 GT ./. chr2 10104013 . A . . LowGQX END=10104174 GT ./. chr2 10104362 . A . . LowGQX END=10104478 GT ./. chr2 10105414 . A . . LowGQX END=10105514 GT ./. chr2 10126250 . A . . LowGQX END=10126413 GT ./. chr2 10130812 . C . . LowGQX END=10130912 GT ./. chr2 10132133 . A . . LowGQX END=10132277 GT ./. chr2 10133304 . T . . LowGQX END=10133404 GT ./. chr2 10136003 . G . . LowGQX END=10136103 GT ./. chr2 10136437 . T . . LowGQX END=10136537 GT ./. chr2 10139076 . T . . LowGQX END=10139176 GT ./. chr2 10140719 . A . . LowGQX END=10140838 GT ./. chr2 10183733 . G . . LowGQX END=10183937 GT ./. chr2 10186226 . G . . LowGQX END=10186598 GT ./. chr2 10187726 . A . . LowGQX END=10188774 GT ./. chr2 10192303 . A . . LowGQX END=10192686 GT ./. chr2 10198978 . C . . LowGQX END=10199088 GT ./. chr2 10206008 . A . . LowGQX END=10206108 GT ./. chr2 10220020 . C . . LowGQX END=10220360 GT ./. chr2 10223907 . A . . LowGQX END=10224073 GT ./. chr2 10225254 . G . . LowGQX END=10225354 GT ./. chr2 10226138 . A . . LowGQX END=10226238 GT ./. chr2 10262745 . A . . LowGQX END=10263027 GT ./. chr2 10263038 . G . . LowGQX END=10263198 GT ./. chr2 10263490 . A . . LowGQX END=10263660 GT ./. chr2 10263861 . A . . LowGQX END=10263982 GT ./. chr2 10264792 . T . . LowGQX END=10264980 GT ./. chr2 10267000 . A . . LowGQX END=10267100 GT ./. chr2 10267212 . A . . LowGQX END=10267350 GT ./. chr2 10268973 . A . . LowGQX END=10269082 GT ./. chr2 10269166 . A . . LowGQX END=10269284 GT ./. chr2 10269359 . A . . LowGQX END=10269516 GT ./. chr2 10281996 . G . . LowGQX END=10282096 GT ./. chr2 10282380 . A . . LowGQX END=10282505 GT ./. chr2 10350435 . A . . LowGQX END=10350726 GT ./. chr2 10559882 . C . . LowGQX END=10560264 GT ./. chr2 10563107 . A . . LowGQX END=10563256 GT ./. chr2 10564644 . T . . LowGQX END=10564744 GT ./. chr2 10566848 . A . . LowGQX END=10566950 GT ./. chr2 10580848 . A . . LowGQX END=10580997 GT ./. chr2 10581633 . A . . LowGQX END=10581852 GT ./. chr2 10581941 . A . . LowGQX END=10582058 GT ./. chr2 10582136 . A . . LowGQX END=10582303 GT ./. chr2 10583294 . A . . LowGQX END=10583448 GT ./. chr2 10583607 . T . . LowGQX END=10583707 GT ./. chr2 10583826 . A . . LowGQX END=10583965 GT ./. chr2 10584219 . A . . LowGQX END=10584396 GT ./. chr2 10584598 . A . . LowGQX END=10584776 GT ./. chr2 10585055 . A . . LowGQX END=10585161 GT ./. chr2 10712196 . A . . LowGQX END=10712317 GT ./. chr2 10717761 . C . . LowGQX END=10717865 GT ./. chr2 10729168 . C . . LowGQX END=10729417 GT ./. chr2 10729703 . C . . LowGQX END=10729878 GT ./. chr2 10740918 . A . . LowGQX END=10741074 GT ./. chr2 10742901 . C . . LowGQX END=10743001 GT ./. chr2 10743194 . T . . LowGQX END=10743294 GT ./. chr2 10747310 . C . . LowGQX END=10747480 GT ./. chr2 10762199 . T . . LowGQX END=10762299 GT ./. chr2 10774629 . A . . LowGQX END=10774729 GT ./. chr2 10784422 . G . . LowGQX END=10784575 GT ./. chr2 10794536 . T . . LowGQX END=10794690 GT ./. chr2 10797867 . C . . LowGQX END=10798018 GT ./. chr2 10799287 . A . . LowGQX END=10799387 GT ./. chr2 10803078 . T . . LowGQX END=10803178 GT ./. chr2 10807324 . T . . LowGQX END=10807424 GT ./. chr2 10808767 . T . . LowGQX END=10808867 GT ./. chr2 10811679 . C . . LowGQX END=10811817 GT ./. chr2 10813615 . A . . LowGQX END=10813715 GT ./. chr2 10815849 . C . . LowGQX END=10816009 GT ./. chr2 10822026 . A . . LowGQX END=10822196 GT ./. chr2 10824666 . G . . LowGQX END=10824766 GT ./. chr2 10829905 . G . . LowGQX END=10830005 GT ./. chr2 10862974 . G . . LowGQX END=10863107 GT ./. chr2 10866612 . T . . LowGQX END=10866712 GT ./. chr2 10894100 . T . . LowGQX END=10894200 GT ./. chr2 10904455 . A . . LowGQX END=10904555 GT ./. chr2 10908841 . A . . LowGQX END=10908941 GT ./. chr2 10911963 . A . . LowGQX END=10912066 GT ./. chr2 10912653 . T . . LowGQX END=10912753 GT ./. chr2 10914911 . C . . LowGQX END=10915011 GT ./. chr2 10915101 . A . . LowGQX END=10915201 GT ./. chr2 10917709 . A . . LowGQX END=10917851 GT ./. chr2 10918696 . A . . LowGQX END=10918798 GT ./. chr2 10922367 . A . . LowGQX END=10922504 GT ./. chr2 10923295 . T . . LowGQX END=10923395 GT ./. chr2 10924369 . C . . LowGQX END=10924469 GT ./. chr2 10925058 . A . . LowGQX END=10925159 GT ./. chr2 10927375 . A . . LowGQX END=10927568 GT ./. chr2 10928810 . C . . LowGQX END=10928910 GT ./. chr2 10929016 . G . . LowGQX END=10929116 GT ./. chr2 10929873 . A . . LowGQX END=10930018 GT ./. chr2 10930843 . A . . LowGQX END=10930962 GT ./. chr2 10931919 . A . . LowGQX END=10932054 GT ./. chr2 10933220 . A . . LowGQX END=10933331 GT ./. chr2 10937155 . A . . LowGQX END=10937336 GT ./. chr2 10937805 . T . . LowGQX END=10937905 GT ./. chr2 10942623 . A . . LowGQX END=10942803 GT ./. chr2 10950324 . T . . LowGQX END=10950424 GT ./. chr2 10952704 . G . . LowGQX END=10952864 GT ./. chr2 10959390 . C . . LowGQX END=10959490 GT ./. chr2 10960894 . C . . LowGQX END=10960994 GT ./. chr2 10977641 . C . . LowGQX END=10977741 GT ./. chr2 10994492 . G . . LowGQX END=10994727 GT ./. chr2 10994963 . A . . LowGQX END=10995063 GT ./. chr2 11052551 . G . . LowGQX END=11054040 GT ./. chr2 11245717 . T . . LowGQX END=11245817 GT ./. chr2 11260889 . C . . LowGQX END=11261089 GT ./. chr2 11264709 . C . . LowGQX END=11264912 GT ./. chr2 11268836 . G . . LowGQX END=11268936 GT ./. chr2 11273449 . C . . LowGQX END=11273729 GT ./. chr2 11280606 . T . . LowGQX END=11280706 GT ./. chr2 11284044 . A . . LowGQX END=11284240 GT ./. chr2 11295259 . G . . LowGQX END=11295419 GT ./. chr2 11295623 . G . . LowGQX END=11295818 GT ./. chr2 11300584 . C . . LowGQX END=11300684 GT ./. chr2 11300740 . C . . LowGQX END=11300840 GT ./. chr2 11304258 . T . . LowGQX END=11304409 GT ./. chr2 11312049 . A . . LowGQX END=11312174 GT ./. chr2 11312843 . A . . LowGQX END=11312943 GT ./. chr2 11315065 . T . . LowGQX END=11315165 GT ./. chr2 11317859 . T . . LowGQX END=11317959 GT ./. chr2 11323515 . T . . LowGQX END=11323615 GT ./. chr2 11332272 . A . . LowGQX END=11332490 GT ./. chr2 11332575 . A . . LowGQX END=11332841 GT ./. chr2 11333843 . T . . LowGQX END=11333995 GT ./. chr2 11334377 . C . . LowGQX END=11334530 GT ./. chr2 11335067 . A . . LowGQX END=11335167 GT ./. chr2 11337304 . A . . LowGQX END=11337477 GT ./. chr2 11337650 . A . . LowGQX END=11337834 GT ./. chr2 11338615 . A . . LowGQX END=11338715 GT ./. chr2 11338804 . T . . LowGQX END=11338904 GT ./. chr2 11341081 . A . . LowGQX END=11341272 GT ./. chr2 11341434 . A . . LowGQX END=11341542 GT ./. chr2 11342163 . G . . LowGQX END=11342263 GT ./. chr2 11347850 . A . . LowGQX END=11348050 GT ./. chr2 11348411 . A . . LowGQX END=11348576 GT ./. chr2 11351805 . A . . LowGQX END=11351969 GT ./. chr2 11354481 . A . . LowGQX END=11354592 GT ./. chr2 11354964 . A . . LowGQX END=11355215 GT ./. chr2 11355443 . C . . LowGQX END=11355543 GT ./. chr2 11355634 . A . . LowGQX END=11355774 GT ./. chr2 11356259 . T . . LowGQX END=11356359 GT ./. chr2 11357206 . C . . LowGQX END=11357306 GT ./. chr2 11357398 . T . . LowGQX END=11357498 GT ./. chr2 11358535 . A . . LowGQX END=11358635 GT ./. chr2 11359020 . A . . LowGQX END=11359173 GT ./. chr2 11361322 . A . . LowGQX END=11361512 GT ./. chr2 11362205 . T . . LowGQX END=11362305 GT ./. chr2 11364446 . A . . LowGQX END=11364646 GT ./. chr2 11367378 . A . . LowGQX END=11367527 GT ./. chr2 11375826 . A . . LowGQX END=11376091 GT ./. chr2 11389785 . A . . LowGQX END=11389927 GT ./. chr2 11426663 . A . . LowGQX END=11426768 GT ./. chr2 11427719 . A . . LowGQX END=11427872 GT ./. chr2 11484089 . C . . LowGQX END=11484300 GT ./. chr2 11586577 . A . . LowGQX END=11586677 GT ./. chr2 11587751 . A . . LowGQX END=11587903 GT ./. chr2 11590136 . A . . LowGQX END=11590255 GT ./. chr2 11591775 . A . . LowGQX END=11591985 GT ./. chr2 11593706 . A . . LowGQX END=11593927 GT ./. chr2 11595550 . A . . LowGQX END=11595650 GT ./. chr2 11597223 . A . . LowGQX END=11597383 GT ./. chr2 11598363 . G . . LowGQX END=11598507 GT ./. chr2 11605842 . G . . LowGQX END=11606008 GT ./. chr2 11696739 . A . . LowGQX END=11696900 GT ./. chr2 11702536 . C . . LowGQX END=11702757 GT ./. chr2 11706604 . A . . LowGQX END=11706785 GT ./. chr2 11716477 . A . . LowGQX END=11716664 GT ./. chr2 11718421 . A . . LowGQX END=11718560 GT ./. chr2 11720828 . A . . LowGQX END=11721150 GT ./. chr2 11725215 . C . . LowGQX END=11725403 GT ./. chr2 11725886 . A . . LowGQX END=11726034 GT ./. chr2 11727494 . C . . LowGQX END=11727594 GT ./. chr2 11728811 . A . . LowGQX END=11729060 GT ./. chr2 11731487 . C . . LowGQX END=11731587 GT ./. chr2 11732900 . A . . LowGQX END=11733255 GT ./. chr2 11735375 . A . . LowGQX END=11735508 GT ./. chr2 11736235 . A . . LowGQX END=11736368 GT ./. chr2 11737905 . A . . LowGQX END=11738107 GT ./. chr2 11738804 . A . . LowGQX END=11738989 GT ./. chr2 11740914 . C . . LowGQX END=11741124 GT ./. chr2 11742530 . A . . LowGQX END=11742671 GT ./. chr2 11750812 . A . . LowGQX END=11751156 GT ./. chr2 11752619 . A . . LowGQX END=11752739 GT ./. chr2 11755215 . A . . LowGQX END=11755419 GT ./. chr2 11756752 . A . . LowGQX END=11756852 GT ./. chr2 11758412 . A . . LowGQX END=11759048 GT ./. chr2 11761029 . A . . LowGQX END=11761136 GT ./. chr2 11765278 . A . . LowGQX END=11765441 GT ./. chr2 11767046 . T . . LowGQX END=11767233 GT ./. chr2 11770072 . A . . LowGQX END=11770238 GT ./. chr2 11772033 . A . . LowGQX END=11772242 GT ./. chr2 11773013 . A . . LowGQX END=11773192 GT ./. chr2 11774255 . A . . LowGQX END=11774478 GT ./. chr2 11775363 . C . . LowGQX END=11775534 GT ./. chr2 11777840 . A . . LowGQX END=11778045 GT ./. chr2 11778795 . A . . LowGQX END=11778938 GT ./. chr2 11780415 . A . . LowGQX END=11780605 GT ./. chr2 11798603 . A . . LowGQX END=11798851 GT ./. chr2 11800165 . T . . LowGQX END=11800265 GT ./. chr2 11802091 . A . . LowGQX END=11802369 GT ./. chr2 11809630 . A . . LowGQX END=11810258 GT ./. chr2 11817764 . A . . LowGQX END=11817864 GT ./. chr2 11853860 . T . . LowGQX END=11853960 GT ./. chr2 11881500 . A . . LowGQX END=11881600 GT ./. chr2 11905613 . G . . LowGQX END=11905911 GT ./. chr2 11907838 . C . . LowGQX END=11908036 GT ./. chr2 11911447 . C . . LowGQX END=11911857 GT ./. chr2 11913695 . G . . LowGQX END=11913923 GT ./. chr2 11916211 . G . . LowGQX END=11916320 GT ./. chr2 11919594 . T . . LowGQX END=11919823 GT ./. chr2 11922276 . C . . LowGQX END=11922685 GT ./. chr2 11923904 . A . . LowGQX END=11924101 GT ./. chr2 11924961 . C . . LowGQX END=11925254 GT ./. chr2 11927149 . A . . LowGQX END=11927345 GT ./. chr2 11928458 . A . . LowGQX END=11928634 GT ./. chr2 11931823 . A . . LowGQX END=11931923 GT ./. chr2 11931989 . A . . LowGQX END=11932184 GT ./. chr2 11935483 . A . . LowGQX END=11935665 GT ./. chr2 11942982 . G . . LowGQX END=11943211 GT ./. chr2 11944498 . A . . LowGQX END=11944749 GT ./. chr2 11945145 . T . . LowGQX END=11945334 GT ./. chr2 11955163 . A . . LowGQX END=11955418 GT ./. chr2 11959559 . C . . LowGQX END=11959776 GT ./. chr2 11960486 . A . . LowGQX END=11960692 GT ./. chr2 11964707 . G . . LowGQX END=11964969 GT ./. chr2 12858432 . T . . LowGQX END=12858706 GT ./. chr2 12863384 . A . . LowGQX END=12863681 GT ./. chr2 12864754 . G . . LowGQX END=12864951 GT ./. chr2 12880450 . A . . LowGQX END=12880923 GT ./. chr2 14774102 . T . . LowGQX END=14775769 GT ./. chr2 14789394 . G . . LowGQX END=14789494 GT ./. chr2 15307121 . C . . LowGQX END=15307499 GT ./. chr2 15318228 . A . . LowGQX END=15318328 GT ./. chr2 15319071 . A . . LowGQX END=15319292 GT ./. chr2 15326815 . T . . LowGQX END=15327056 GT ./. chr2 15330337 . A . . LowGQX END=15330579 GT ./. chr2 15358846 . C . . LowGQX END=15359144 GT ./. chr2 15372495 . T . . LowGQX END=15372687 GT ./. chr2 15374618 . A . . LowGQX END=15374923 GT ./. chr2 15378541 . G . . LowGQX END=15378862 GT ./. chr2 15415557 . T . . LowGQX END=15415994 GT ./. chr2 15416924 . C . . LowGQX END=15417277 GT ./. chr2 15427146 . G . . LowGQX END=15427359 GT ./. chr2 15432610 . T . . LowGQX END=15432942 GT ./. chr2 15448289 . A . . LowGQX END=15448529 GT ./. chr2 15449193 . A . . LowGQX END=15449423 GT ./. chr2 15467823 . A . . LowGQX END=15468046 GT ./. chr2 15468272 . T . . LowGQX END=15468488 GT ./. chr2 15470671 . A . . LowGQX END=15470941 GT ./. chr2 15492065 . T . . LowGQX END=15492257 GT ./. chr2 15493626 . C . . LowGQX END=15493886 GT ./. chr2 15496376 . C . . LowGQX END=15496592 GT ./. chr2 15506653 . C . . LowGQX END=15506869 GT ./. chr2 15514681 . A . . LowGQX END=15514896 GT ./. chr2 15519675 . A . . LowGQX END=15520007 GT ./. chr2 15523288 . A . . LowGQX END=15523493 GT ./. chr2 15533772 . A . . LowGQX END=15533872 GT ./. chr2 15534300 . A . . LowGQX END=15534525 GT ./. chr2 15536486 . C . . LowGQX END=15536651 GT ./. chr2 15542241 . A . . LowGQX END=15542477 GT ./. chr2 15555619 . T . . LowGQX END=15555895 GT ./. chr2 15557600 . G . . LowGQX END=15557888 GT ./. chr2 15564388 . C . . LowGQX END=15564644 GT ./. chr2 15567784 . T . . LowGQX END=15567970 GT ./. chr2 15601274 . A . . LowGQX END=15601513 GT ./. chr2 15601760 . T . . LowGQX END=15601967 GT ./. chr2 15607402 . A . . LowGQX END=15607583 GT ./. chr2 15607737 . T . . LowGQX END=15607980 GT ./. chr2 15608455 . A . . LowGQX END=15608709 GT ./. chr2 15613295 . G . . LowGQX END=15613523 GT ./. chr2 15614140 . A . . LowGQX END=15614500 GT ./. chr2 15615760 . A . . LowGQX END=15616056 GT ./. chr2 15618299 . T . . LowGQX END=15618465 GT ./. chr2 15623439 . A . . LowGQX END=15623539 GT ./. chr2 15628967 . T . . LowGQX END=15629198 GT ./. chr2 15644213 . T . . LowGQX END=15644389 GT ./. chr2 15651285 . A . . LowGQX END=15651526 GT ./. chr2 15674616 . T . . LowGQX END=15674817 GT ./. chr2 15676491 . A . . LowGQX END=15676727 GT ./. chr2 15678433 . T . . LowGQX END=15678533 GT ./. chr2 15679296 . A . . LowGQX END=15679532 GT ./. chr2 15691566 . A . . LowGQX END=15691712 GT ./. chr2 15693484 . T . . LowGQX END=15693649 GT ./. chr2 15694134 . A . . LowGQX END=15694314 GT ./. chr2 15696856 . A . . LowGQX END=15696995 GT ./. chr2 15698653 . C . . LowGQX END=15698810 GT ./. chr2 15701261 . C . . LowGQX END=15701480 GT ./. chr2 15731956 . A . . LowGQX END=15732116 GT ./. chr2 15735245 . T . . LowGQX END=15735345 GT ./. chr2 15735596 . C . . LowGQX END=15735696 GT ./. chr2 15736823 . T . . LowGQX END=15736923 GT ./. chr2 15737447 . A . . LowGQX END=15737598 GT ./. chr2 15739767 . A . . LowGQX END=15739867 GT ./. chr2 15742664 . A . . LowGQX END=15742764 GT ./. chr2 15743308 . C . . LowGQX END=15743408 GT ./. chr2 15743927 . T . . LowGQX END=15744027 GT ./. chr2 15744548 . T . . LowGQX END=15744648 GT ./. chr2 15746063 . T . . LowGQX END=15746163 GT ./. chr2 15746272 . A . . LowGQX END=15746391 GT ./. chr2 15747297 . A . . LowGQX END=15747440 GT ./. chr2 15753329 . A . . LowGQX END=15753429 GT ./. chr2 15757366 . A . . LowGQX END=15757469 GT ./. chr2 15758300 . T . . LowGQX END=15758400 GT ./. chr2 15760320 . T . . LowGQX END=15760523 GT ./. chr2 15761165 . G . . LowGQX END=15761317 GT ./. chr2 15763558 . A . . LowGQX END=15763709 GT ./. chr2 15767174 . C . . LowGQX END=15767274 GT ./. chr2 15768556 . C . . LowGQX END=15768656 GT ./. chr2 15768749 . T . . LowGQX END=15768849 GT ./. chr2 15768893 . T . . LowGQX END=15768993 GT ./. chr2 15769664 . A . . LowGQX END=15769824 GT ./. chr2 15770112 . A . . LowGQX END=15770282 GT ./. chr2 15770898 . A . . LowGQX END=15771033 GT ./. chr2 15840524 . A . . LowGQX END=15840660 GT ./. chr2 15841352 . G . . LowGQX END=15841500 GT ./. chr2 15883580 . A . . LowGQX END=15883680 GT ./. chr2 15884313 . T . . LowGQX END=15884413 GT ./. chr2 16082136 . A . . LowGQX END=16083028 GT ./. chr2 16085554 . T . . LowGQX END=16086271 GT ./. chr2 16734186 . T . . LowGQX END=16734286 GT ./. chr2 16736323 . G . . LowGQX END=16736423 GT ./. chr2 16740726 . A . . LowGQX END=16740857 GT ./. chr2 16742248 . T . . LowGQX END=16742348 GT ./. chr2 16742427 . A . . LowGQX END=16742548 GT ./. chr2 16742713 . C . . LowGQX END=16742813 GT ./. chr2 16743271 . A . . LowGQX END=16743412 GT ./. chr2 16745255 . A . . LowGQX END=16745365 GT ./. chr2 16746912 . A . . LowGQX END=16747038 GT ./. chr2 16769303 . A . . LowGQX END=16769403 GT ./. chr2 17692069 . A . . LowGQX END=17692225 GT ./. chr2 17695217 . T . . LowGQX END=17695370 GT ./. chr2 17696434 . A . . LowGQX END=17699685 GT ./. chr2 17773340 . G . . LowGQX END=17773506 GT ./. chr2 17830675 . A . . LowGQX END=17830895 GT ./. chr2 17836462 . A . . LowGQX END=17836664 GT ./. chr2 17846764 . A . . LowGQX END=17846883 GT ./. chr2 17847685 . A . . LowGQX END=17847787 GT ./. chr2 17851667 . G . . LowGQX END=17851845 GT ./. chr2 17860124 . A . . LowGQX END=17860234 GT ./. chr2 17864903 . A . . LowGQX END=17865083 GT ./. chr2 17876387 . G . . LowGQX END=17876567 GT ./. chr2 17877554 . A . . LowGQX END=17877734 GT ./. chr2 17881473 . A . . LowGQX END=17881648 GT ./. chr2 17883034 . A . . LowGQX END=17883187 GT ./. chr2 17884422 . A . . LowGQX END=17884602 GT ./. chr2 17888484 . A . . LowGQX END=17888649 GT ./. chr2 17889904 . A . . LowGQX END=17890023 GT ./. chr2 17894714 . G . . LowGQX END=17894874 GT ./. chr2 17896056 . G . . LowGQX END=17896396 GT ./. chr2 17897351 . A . . LowGQX END=17897551 GT ./. chr2 17898006 . A . . LowGQX END=17898175 GT ./. chr2 17898350 . C . . LowGQX END=17898450 GT ./. chr2 17899342 . A . . LowGQX END=17899493 GT ./. chr2 17902205 . A . . LowGQX END=17902308 GT ./. chr2 17902407 . A . . LowGQX END=17902531 GT ./. chr2 17906472 . A . . LowGQX END=17906628 GT ./. chr2 17907647 . G . . LowGQX END=17907747 GT ./. chr2 17912273 . T . . LowGQX END=17912426 GT ./. chr2 17913006 . A . . LowGQX END=17913147 GT ./. chr2 17919486 . A . . LowGQX END=17919596 GT ./. chr2 17921940 . G . . LowGQX END=17922101 GT ./. chr2 17922877 . A . . LowGQX END=17922999 GT ./. chr2 17927092 . A . . LowGQX END=17927216 GT ./. chr2 17941209 . G . . LowGQX END=17941374 GT ./. chr2 17942661 . A . . LowGQX END=17942852 GT ./. chr2 17946162 . A . . LowGQX END=17946362 GT ./. chr2 17947844 . A . . LowGQX END=17947959 GT ./. chr2 17949992 . C . . LowGQX END=17950092 GT ./. chr2 17952305 . A . . LowGQX END=17952405 GT ./. chr2 17952459 . A . . LowGQX END=17952559 GT ./. chr2 17953899 . A . . LowGQX END=17954054 GT ./. chr2 17954332 . A . . LowGQX END=17954432 GT ./. chr2 17954477 . T . . LowGQX END=17954577 GT ./. chr2 17955536 . A . . LowGQX END=17955671 GT ./. chr2 17959250 . A . . LowGQX END=17959350 GT ./. chr2 17961243 . A . . LowGQX END=17961423 GT ./. chr2 17961886 . A . . LowGQX END=17963209 GT ./. chr2 17997784 . G . . LowGQX END=17998370 GT ./. chr2 18112274 . C . . LowGQX END=18113754 GT ./. chr2 18736455 . T . . LowGQX END=18737077 GT ./. chr2 18741433 . C . . LowGQX END=18741843 GT ./. chr2 18745060 . C . . LowGQX END=18745388 GT ./. chr2 18757438 . C . . LowGQX END=18757637 GT ./. chr2 18758037 . A . . LowGQX END=18758217 GT ./. chr2 18764132 . A . . LowGQX END=18764266 GT ./. chr2 18765111 . G . . LowGQX END=18765211 GT ./. chr2 18765219 . T . . LowGQX END=18765524 GT ./. chr2 18765771 . C . . LowGQX END=18766247 GT ./. chr2 18766357 . T . . LowGQX END=18766457 GT ./. chr2 18767513 . C . . LowGQX END=18767660 GT ./. chr2 18768208 . C . . LowGQX END=18768442 GT ./. chr2 18768764 . C . . LowGQX END=18768864 GT ./. chr2 18770670 . C . . LowGQX END=18770808 GT ./. chr2 19552034 . A . . LowGQX END=19552174 GT ./. chr2 19552900 . A . . LowGQX END=19553569 GT ./. chr2 20096746 . T . . LowGQX END=20096926 GT ./. chr2 20097628 . A . . LowGQX END=20097799 GT ./. chr2 20100787 . A . . LowGQX END=20100887 GT ./. chr2 20101465 . A . . LowGQX END=20101618 GT ./. chr2 20113268 . C . . LowGQX END=20113521 GT ./. chr2 20113747 . T . . LowGQX END=20114090 GT ./. chr2 20130106 . A . . LowGQX END=20130365 GT ./. chr2 20130979 . T . . LowGQX END=20131222 GT ./. chr2 20131993 . A . . LowGQX END=20132260 GT ./. chr2 20133111 . T . . LowGQX END=20133324 GT ./. chr2 20135164 . C . . LowGQX END=20135416 GT ./. chr2 20135929 . A . . LowGQX END=20136168 GT ./. chr2 20137453 . C . . LowGQX END=20137759 GT ./. chr2 20137975 . C . . LowGQX END=20138214 GT ./. chr2 20141469 . A . . LowGQX END=20141652 GT ./. chr2 20145496 . T . . LowGQX END=20145809 GT ./. chr2 20146171 . A . . LowGQX END=20146383 GT ./. chr2 20147874 . T . . LowGQX END=20148030 GT ./. chr2 20151125 . A . . LowGQX END=20151297 GT ./. chr2 20153544 . C . . LowGQX END=20153791 GT ./. chr2 20160264 . G . . LowGQX END=20160427 GT ./. chr2 20162005 . A . . LowGQX END=20162140 GT ./. chr2 20166434 . T . . LowGQX END=20166722 GT ./. chr2 20169190 . A . . LowGQX END=20169418 GT ./. chr2 20173273 . C . . LowGQX END=20173521 GT ./. chr2 20174178 . A . . LowGQX END=20174446 GT ./. chr2 20175240 . C . . LowGQX END=20175476 GT ./. chr2 20178461 . A . . LowGQX END=20178692 GT ./. chr2 20180401 . T . . LowGQX END=20180596 GT ./. chr2 20182173 . A . . LowGQX END=20182347 GT ./. chr2 20188875 . A . . LowGQX END=20189095 GT ./. chr2 20189702 . C . . LowGQX END=20189828 GT ./. chr2 20192820 . A . . LowGQX END=20192980 GT ./. chr2 20194035 . G . . LowGQX END=20194195 GT ./. chr2 20196834 . A . . LowGQX END=20197021 GT ./. chr2 20200201 . C . . LowGQX END=20200361 GT ./. chr2 20201715 . C . . LowGQX END=20201875 GT ./. chr2 20202911 . A . . LowGQX END=20203048 GT ./. chr2 20205504 . C . . LowGQX END=20206072 GT ./. chr2 20212169 . C . . LowGQX END=20212398 GT ./. chr2 20232954 . G . . LowGQX END=20233054 GT ./. chr2 20234076 . A . . LowGQX END=20234179 GT ./. chr2 20234726 . A . . LowGQX END=20234826 GT ./. chr2 20237056 . T . . LowGQX END=20237202 GT ./. chr2 20237288 . A . . LowGQX END=20237388 GT ./. chr2 20240650 . A . . LowGQX END=20240775 GT ./. chr2 20251117 . C . . LowGQX END=20251284 GT ./. chr2 20401997 . A . . LowGQX END=20402097 GT ./. chr2 20402525 . C . . LowGQX END=20402699 GT ./. chr2 20402846 . A . . LowGQX END=20402986 GT ./. chr2 20403572 . A . . LowGQX END=20404062 GT ./. chr2 20405095 . C . . LowGQX END=20405195 GT ./. chr2 20422981 . C . . LowGQX END=20423081 GT ./. chr2 20423891 . G . . LowGQX END=20424047 GT ./. chr2 20424486 . C . . LowGQX END=20424646 GT ./. chr2 20451344 . A . . LowGQX END=20451480 GT ./. chr2 20453581 . A . . LowGQX END=20453778 GT ./. chr2 20454622 . A . . LowGQX END=20454748 GT ./. chr2 20454975 . A . . LowGQX END=20455105 GT ./. chr2 20455792 . A . . LowGQX END=20455972 GT ./. chr2 20457997 . C . . LowGQX END=20458135 GT ./. chr2 20460096 . A . . LowGQX END=20460230 GT ./. chr2 20462952 . A . . LowGQX END=20463224 GT ./. chr2 20478342 . A . . LowGQX END=20478583 GT ./. chr2 20482706 . A . . LowGQX END=20482995 GT ./. chr2 20483102 . A . . LowGQX END=20483250 GT ./. chr2 20490411 . A . . LowGQX END=20490554 GT ./. chr2 20494135 . A . . LowGQX END=20494282 GT ./. chr2 20497312 . A . . LowGQX END=20497442 GT ./. chr2 20507736 . C . . LowGQX END=20507836 GT ./. chr2 20508073 . A . . LowGQX END=20508348 GT ./. chr2 20511253 . A . . LowGQX END=20511463 GT ./. chr2 20511995 . A . . LowGQX END=20512195 GT ./. chr2 20518296 . A . . LowGQX END=20518409 GT ./. chr2 20526070 . C . . LowGQX END=20526170 GT ./. chr2 20526989 . G . . LowGQX END=20527147 GT ./. chr2 20647225 . T . . LowGQX END=20647820 GT ./. chr2 20797955 . T . . LowGQX END=20798055 GT ./. chr2 20818745 . G . . LowGQX END=20819008 GT ./. chr2 20822021 . G . . LowGQX END=20822121 GT ./. chr2 20823622 . G . . LowGQX END=20823812 GT ./. chr2 20824490 . A . . LowGQX END=20824710 GT ./. chr2 20838176 . C . . LowGQX END=20838415 GT ./. chr2 20840538 . T . . LowGQX END=20840943 GT ./. chr2 20845098 . A . . LowGQX END=20845268 GT ./. chr2 20850698 . C . . LowGQX END=20850858 GT ./. chr2 20866987 . G . . LowGQX END=20867397 GT ./. chr2 20870222 . A . . LowGQX END=20871188 GT ./. chr2 20884620 . C . . LowGQX END=20884720 GT ./. chr2 20885306 . C . . LowGQX END=20885418 GT ./. chr2 20886661 . A . . LowGQX END=20886857 GT ./. chr2 20901322 . G . . LowGQX END=20901422 GT ./. chr2 20939729 . A . . LowGQX END=20939968 GT ./. chr2 20974548 . T . . LowGQX END=20974742 GT ./. chr2 20988897 . T . . LowGQX END=20989101 GT ./. chr2 20990013 . A . . LowGQX END=20990161 GT ./. chr2 21001052 . C . . LowGQX END=21001226 GT ./. chr2 21224551 . T . . LowGQX END=21226258 GT ./. chr2 21227090 . C . . LowGQX END=21227376 GT ./. chr2 21227382 . A . . LowGQX END=21227599 GT ./. chr2 21227901 . C . . LowGQX END=21235575 GT ./. chr2 21235981 . A . . LowGQX END=21236457 GT ./. chr2 21237269 . C . . LowGQX END=21237517 GT ./. chr2 21237894 . G . . LowGQX END=21238184 GT ./. chr2 21238191 . T . . LowGQX END=21238469 GT ./. chr2 21239260 . A . . LowGQX END=21239573 GT ./. chr2 21241813 . T . . LowGQX END=21242037 GT ./. chr2 21242544 . C . . LowGQX END=21242829 GT ./. chr2 21245652 . T . . LowGQX END=21245966 GT ./. chr2 21246346 . C . . LowGQX END=21246616 GT ./. chr2 21247657 . C . . LowGQX END=21248048 GT ./. chr2 21249609 . T . . LowGQX END=21249888 GT ./. chr2 21250649 . T . . LowGQX END=21250989 GT ./. chr2 21251148 . A . . LowGQX END=21251462 GT ./. chr2 21252460 . A . . LowGQX END=21252709 GT ./. chr2 21252719 . C . . LowGQX END=21252939 GT ./. chr2 21255175 . T . . LowGQX END=21255505 GT ./. chr2 21256120 . C . . LowGQX END=21256442 GT ./. chr2 21257637 . A . . LowGQX END=21257825 GT ./. chr2 21258405 . G . . LowGQX END=21258632 GT ./. chr2 21259921 . T . . LowGQX END=21260179 GT ./. chr2 21260779 . A . . LowGQX END=21261035 GT ./. chr2 21263759 . T . . LowGQX END=21264007 GT ./. chr2 21265182 . G . . LowGQX END=21265400 GT ./. chr2 21266334 . A . . LowGQX END=21266475 GT ./. chr2 21266685 . C . . LowGQX END=21266869 GT ./. chr2 21360339 . A . . LowGQX END=21366145 GT ./. chr2 23729912 . T . . LowGQX END=23730017;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:56 chr2 23730018 . T . 33.01 LowGQX DP=2;MQ=56;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:56:3 chr2 23730019 . G . . LowGQX END=23730026;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:56 chr2 23730027 . T . 33.01 LowGQX DP=2;MQ=56;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:56:3 chr2 23730028 . C . . LowGQX END=23730030;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:56 chr2 23730031 . T . . LowGQX END=23730037;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:6:57 chr2 23730038 . C . 36.01 LowGQX DP=3;MQ=57;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:2:3:6.02:57:6 chr2 23730039 . A . . LowGQX END=23730043;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:56 chr2 23730044 . A . 14.48 LowGQX DP=2;MQ=56;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:0.12:56:0 chr2 23730045 . T . . LowGQX . GT:DP:GQX:MQ 0/0:2:6:56 chr2 23730046 . C . 33.01 LowGQX DP=2;MQ=56;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:56:3 chr2 23730047 . A . . LowGQX END=23730061;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:56 chr2 23730062 . C . 33 LowGQX DP=2;MQ=56;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:56:3 chr2 23730063 . A . 33.01 LowGQX DP=2;MQ=56;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:56:3 chr2 23730064 . G . . LowGQX END=23730067;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:56 chr2 23730068 . C . 33.01 LowGQX DP=2;MQ=56;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:56:3 chr2 23730069 . C . . LowGQX END=23730071;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:56 chr2 23730072 . C . 14.48 LowGQX DP=2;MQ=56;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:0.12:56:0 chr2 23730073 . A . 33.01 LowGQX DP=2;MQ=56;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:56:3 chr2 23730074 . C . 33.01 LowGQX DP=2;MQ=56;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:56:3 chr2 23730075 . A . . LowGQX END=23730083;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:56 chr2 23730084 . C . 33.01 LowGQX DP=2;MQ=56;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:56:3 chr2 23730085 . A . . LowGQX END=23730094;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:56 chr2 23730095 . T . 33.01 LowGQX DP=2;MQ=56;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:56:3 chr2 23730096 . C . . LowGQX END=23730099;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:56 chr2 23730100 . A G 3.52 LowGQX BaseQRankSum=0.804;DP=2;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;MQ=56;MQ0=0;MQRankSum=0.804;QD=1.76;ReadPosRankSum=0.804;SB=-0.01;TI=NM_052920;GI=KLHL29;FC=Silent GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1,1:2:30.96:31,0,34:56:4:0.500 chr2 23730101 . T . . LowGQX END=23730103;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:56 chr2 23746820 . C . . LowGQX END=23746962 GT ./. chr2 23755429 . T . . LowGQX END=23755529 GT ./. chr2 23785011 . T . . LowGQX END=23785361 GT ./. chr2 23862008 . G . . LowGQX END=23862188 GT ./. chr2 23865207 . G . . LowGQX END=23866065 GT ./. chr2 23907268 . G . . LowGQX END=23907408 GT ./. chr2 23914543 . G . . LowGQX END=23914747 GT ./. chr2 23916138 . G . . LowGQX END=23916399 GT ./. chr2 23918492 . G . . LowGQX END=23918692 GT ./. chr2 23918820 . G . . LowGQX END=23919004 GT ./. chr2 23919191 . C . . LowGQX END=23919388 GT ./. chr2 23926055 . G . . LowGQX END=23926250 GT ./. chr2 23926588 . G . . LowGQX END=23926734 GT ./. chr2 23929350 . G . . LowGQX END=23929535 GT ./. chr2 23974835 . G . . LowGQX END=23974987 GT ./. chr2 23977048 . C . . LowGQX END=23977218 GT ./. chr2 23977516 . C . . LowGQX END=23977645 GT ./. chr2 23980287 . C . . LowGQX END=23980972 GT ./. chr2 23985078 . C . . LowGQX END=23985217 GT ./. chr2 23988375 . C . . LowGQX END=23988499 GT ./. chr2 24005708 . T . . LowGQX END=24005899 GT ./. chr2 24008896 . C . . LowGQX END=24009094 GT ./. chr2 24011381 . C . . LowGQX END=24011518 GT ./. chr2 24021007 . C . . LowGQX END=24021194 GT ./. chr2 24033185 . C . . LowGQX END=24033373 GT ./. chr2 24042616 . C . . LowGQX END=24042753 GT ./. chr2 24046127 . C . . LowGQX END=24046440 GT ./. chr2 24051714 . C . . LowGQX END=24051868 GT ./. chr2 24055049 . C . . LowGQX END=24055149 GT ./. chr2 24056788 . C . . LowGQX END=24056949 GT ./. chr2 24079258 . A . . LowGQX END=24079358 GT ./. chr2 24080224 . G . . LowGQX END=24080379 GT ./. chr2 24086250 . C . . LowGQX END=24086426 GT ./. chr2 24087678 . C . . LowGQX END=24087838 GT ./. chr2 24090704 . C . . LowGQX END=24090817 GT ./. chr2 24092447 . T . . LowGQX END=24092632 GT ./. chr2 24098628 . T . . LowGQX END=24098787 GT ./. chr2 24103508 . C . . LowGQX END=24103668 GT ./. chr2 24106435 . G . . LowGQX END=24106535 GT ./. chr2 24107634 . C . . LowGQX END=24107744 GT ./. chr2 24108596 . C . . LowGQX END=24108700 GT ./. chr2 24110701 . C . . LowGQX END=24110856 GT ./. chr2 24111139 . A . . LowGQX END=24111295 GT ./. chr2 24118688 . C . . LowGQX END=24118841 GT ./. chr2 24149389 . T . . LowGQX END=24149641 GT ./. chr2 24181156 . T . . LowGQX END=24181256 GT ./. chr2 24194144 . A . . LowGQX END=24194287 GT ./. chr2 24199837 . A . . LowGQX END=24199948 GT ./. chr2 24205764 . A . . LowGQX END=24205906 GT ./. chr2 24207541 . A . . LowGQX END=24207731 GT ./. chr2 24222530 . G . . LowGQX END=24222740 GT ./. chr2 24232905 . A . . LowGQX END=24233065 GT ./. chr2 24236154 . G . . LowGQX END=24236281 GT ./. chr2 24238975 . C . . LowGQX END=24239151 GT ./. chr2 24239714 . G . . LowGQX END=24239839 GT ./. chr2 24240145 . C . . LowGQX END=24240245 GT ./. chr2 24240327 . G . . LowGQX END=24240459 GT ./. chr2 24244513 . C . . LowGQX END=24244613 GT ./. chr2 24244718 . G . . LowGQX END=24244841 GT ./. chr2 24245242 . C . . LowGQX END=24245395 GT ./. chr2 24245682 . C . . LowGQX END=24245782 GT ./. chr2 24245999 . G . . LowGQX END=24246110 GT ./. chr2 24246452 . G . . LowGQX END=24246597 GT ./. chr2 24246964 . G . . LowGQX END=24247146 GT ./. chr2 24248264 . C . . LowGQX END=24248364 GT ./. chr2 24253801 . T . . LowGQX END=24254035 GT ./. chr2 24255697 . A . . LowGQX END=24255819 GT ./. chr2 24255994 . A . . LowGQX END=24256094 GT ./. chr2 24260545 . A . . LowGQX END=24262367 GT ./. chr2 24272629 . C . . LowGQX END=24272848 GT ./. chr2 24276746 . T . . LowGQX END=24276846 GT ./. chr2 24276967 . C . . LowGQX END=24277067 GT ./. chr2 24283682 . A . . LowGQX END=24283799 GT ./. chr2 24285867 . A . . LowGQX END=24286065 GT ./. chr2 24290627 . A . . LowGQX END=24290727 GT ./. chr2 24291189 . A . . LowGQX END=24291332 GT ./. chr2 24296894 . T . . LowGQX END=24297067 GT ./. chr2 24299035 . G . . LowGQX END=24299135 GT ./. chr2 24300447 . C . . LowGQX END=24300634 GT ./. chr2 24302312 . A . . LowGQX END=24302513 GT ./. chr2 24303645 . A . . LowGQX END=24303904 GT ./. chr2 24305753 . A . . LowGQX END=24306025 GT ./. chr2 24307057 . A . . LowGQX END=24307199 GT ./. chr2 24338418 . A . . LowGQX END=24338518 GT ./. chr2 24342445 . A . . LowGQX END=24342555 GT ./. chr2 24344031 . A . . LowGQX END=24344173 GT ./. chr2 24345237 . A . . LowGQX END=24345408 GT ./. chr2 24347231 . A . . LowGQX END=24347331 GT ./. chr2 24357918 . A . . LowGQX END=24358073 GT ./. chr2 24360778 . G . . LowGQX END=24360978 GT ./. chr2 24362230 . C . . LowGQX END=24362330 GT ./. chr2 24369612 . T . . LowGQX END=24369712 GT ./. chr2 24369799 . G . . LowGQX END=24369957 GT ./. chr2 24384375 . G . . LowGQX END=24384535 GT ./. chr2 24387067 . G . . LowGQX END=24387205 GT ./. chr2 24388222 . A . . LowGQX END=24388322 GT ./. chr2 24390467 . A . . LowGQX END=24390567 GT ./. chr2 24392196 . C . . LowGQX END=24392296 GT ./. chr2 24398288 . C . . LowGQX END=24398447 GT ./. chr2 24400656 . A . . LowGQX END=24400756 GT ./. chr2 24401980 . A . . LowGQX END=24402136 GT ./. chr2 24406148 . T . . LowGQX END=24406248 GT ./. chr2 24406362 . A . . LowGQX END=24406517 GT ./. chr2 24413279 . A . . LowGQX END=24413503 GT ./. chr2 24423428 . G . . LowGQX END=24423611 GT ./. chr2 24426493 . C . . LowGQX END=24426655 GT ./. chr2 24427046 . C . . LowGQX END=24427688 GT ./. chr2 24428075 . G . . LowGQX END=24428175 GT ./. chr2 24429082 . A . . LowGQX END=24429182 GT ./. chr2 24431098 . C . . LowGQX END=24431198 GT ./. chr2 24431967 . A . . LowGQX END=24432093 GT ./. chr2 24432685 . A . . LowGQX END=24432905 GT ./. chr2 24433647 . A . . LowGQX END=24433819 GT ./. chr2 24435517 . A . . LowGQX END=24435676 GT ./. chr2 24438916 . A . . LowGQX END=24439104 GT ./. chr2 24440774 . A . . LowGQX END=24440885 GT ./. chr2 24443762 . C . . LowGQX END=24443982 GT ./. chr2 24468996 . A . . LowGQX END=24469192 GT ./. chr2 24469664 . A . . LowGQX END=24469765 GT ./. chr2 24471496 . A . . LowGQX END=24471622 GT ./. chr2 24471679 . A . . LowGQX END=24471779 GT ./. chr2 24475212 . A . . LowGQX END=24475383 GT ./. chr2 24477219 . A . . LowGQX END=24477319 GT ./. chr2 24480755 . A . . LowGQX END=24480965 GT ./. chr2 24483973 . A . . LowGQX END=24484122 GT ./. chr2 24484428 . A . . LowGQX END=24484614 GT ./. chr2 24493538 . A . . LowGQX END=24493640 GT ./. chr2 24494633 . A . . LowGQX END=24494813 GT ./. chr2 24498580 . A . . LowGQX END=24498721 GT ./. chr2 24507623 . G . . LowGQX END=24507723 GT ./. chr2 24509079 . A . . LowGQX END=24509279 GT ./. chr2 24516495 . A . . LowGQX END=24516651 GT ./. chr2 24518531 . A . . LowGQX END=24518711 GT ./. chr2 24521532 . A . . LowGQX END=24521686 GT ./. chr2 24522776 . A . . LowGQX END=24523043 GT ./. chr2 24524016 . G . . LowGQX END=24524116 GT ./. chr2 24524832 . A . . LowGQX END=24525012 GT ./. chr2 24526650 . A . . LowGQX END=24526750 GT ./. chr2 24531484 . A . . LowGQX END=24531628 GT ./. chr2 24531734 . C . . LowGQX END=24531834 GT ./. chr2 24533151 . A . . LowGQX END=24533252 GT ./. chr2 24533356 . A . . LowGQX END=24533564 GT ./. chr2 24535079 . A . . LowGQX END=24535247 GT ./. chr2 24536311 . A . . LowGQX END=24536411 GT ./. chr2 24537998 . A . . LowGQX END=24538098 GT ./. chr2 24550886 . T . . LowGQX END=24550986 GT ./. chr2 24881542 . T . . LowGQX END=24881642 GT ./. chr2 24888616 . A . . LowGQX END=24888787 GT ./. chr2 24896233 . A . . LowGQX END=24896393 GT ./. chr2 24905798 . T . . LowGQX END=24906000 GT ./. chr2 24914348 . A . . LowGQX END=24914532 GT ./. chr2 24916119 . A . . LowGQX END=24916219 GT ./. chr2 24920525 . A . . LowGQX END=24920670 GT ./. chr2 24927953 . A . . LowGQX END=24928105 GT ./. chr2 24929435 . A . . LowGQX END=24930760 GT ./. chr2 24933758 . A . . LowGQX END=24933983 GT ./. chr2 24949456 . A . . LowGQX END=24949578 GT ./. chr2 24951175 . A . . LowGQX END=24951348 GT ./. chr2 24952368 . A . . LowGQX END=24952687 GT ./. chr2 24962299 . A . . LowGQX END=24962405 GT ./. chr2 24964651 . A . . LowGQX END=24965058 GT ./. chr2 24974849 . A . . LowGQX END=24975028 GT ./. chr2 24980780 . T . . LowGQX END=24981028 GT ./. chr2 24985551 . A . . LowGQX END=24985651 GT ./. chr2 24990921 . A . . LowGQX END=24991021 GT ./. chr2 24991088 . A . . LowGQX END=24991263 GT ./. chr2 25013278 . A . . LowGQX END=25013453 GT ./. chr2 25015993 . A . . LowGQX END=25016249 GT ./. chr2 25016307 . A . . LowGQX END=25016407 GT ./. chr2 25016762 . T . . LowGQX END=25016862 GT ./. chr2 25022542 . A . . LowGQX END=25022716 GT ./. chr2 25037243 . A . . LowGQX END=25037365 GT ./. chr2 25038364 . A . . LowGQX END=25038628 GT ./. chr2 25039513 . A . . LowGQX END=25039689 GT ./. chr2 25040537 . A . . LowGQX END=25040678 GT ./. chr2 25042788 . G . . LowGQX END=25042986 GT ./. chr2 25043591 . A . . LowGQX END=25043720 GT ./. chr2 25044384 . A . . LowGQX END=25044512 GT ./. chr2 25045378 . A . . LowGQX END=25045502 GT ./. chr2 25046076 . A . . LowGQX END=25046256 GT ./. chr2 25047245 . A . . LowGQX END=25047408 GT ./. chr2 25048852 . T . . LowGQX END=25049006 GT ./. chr2 25050397 . G . . LowGQX END=25050497 GT ./. chr2 25050769 . A . . LowGQX END=25051033 GT ./. chr2 25053576 . A . . LowGQX END=25053697 GT ./. chr2 25054525 . T . . LowGQX END=25054625 GT ./. chr2 25057352 . A . . LowGQX END=25057518 GT ./. chr2 25057661 . A . . LowGQX END=25057808 GT ./. chr2 25059784 . A . . LowGQX END=25059917 GT ./. chr2 25061312 . A . . LowGQX END=25061494 GT ./. chr2 25061699 . G . . LowGQX END=25061799 GT ./. chr2 25062719 . T . . LowGQX END=25062903 GT ./. chr2 25063381 . G . . LowGQX END=25063481 GT ./. chr2 25064126 . A . . LowGQX END=25064258 GT ./. chr2 25064423 . A . . LowGQX END=25064539 GT ./. chr2 25065121 . A . . LowGQX END=25065256 GT ./. chr2 25095437 . A . . LowGQX END=25095591 GT ./. chr2 25100746 . G . . LowGQX END=25100846 GT ./. chr2 25141180 . A . . LowGQX END=25141859 GT ./. chr2 25170483 . T . . LowGQX END=25170620 GT ./. chr2 25174261 . A . . LowGQX END=25174426 GT ./. chr2 25179860 . A . . LowGQX END=25180037 GT ./. chr2 25180677 . A . . LowGQX END=25180846 GT ./. chr2 25181406 . A . . LowGQX END=25181506 GT ./. chr2 25186259 . A . . LowGQX END=25186359 GT ./. chr2 25190072 . A . . LowGQX END=25190172 GT ./. chr2 25194681 . A . . LowGQX END=25194781 GT ./. chr2 25265075 . C . . LowGQX END=25265235 GT ./. chr2 25314123 . G . . LowGQX END=25314282 GT ./. chr2 25315871 . G . . LowGQX END=25316000 GT ./. chr2 25326505 . G . . LowGQX END=25326657 GT ./. chr2 25344541 . G . . LowGQX END=25344664 GT ./. chr2 25351051 . G . . LowGQX END=25351202 GT ./. chr2 25352843 . G . . LowGQX END=25352979 GT ./. chr2 25353410 . C . . LowGQX END=25353510 GT ./. chr2 25354236 . G . . LowGQX END=25354373 GT ./. chr2 25354618 . G . . LowGQX END=25354781 GT ./. chr2 25355771 . G . . LowGQX END=25355884 GT ./. chr2 25356228 . A . . LowGQX END=25356328 GT ./. chr2 25358335 . G . . LowGQX END=25358509 GT ./. chr2 25359380 . A . . LowGQX END=25359480 GT ./. chr2 25360209 . G . . LowGQX END=25360372 GT ./. chr2 25361867 . G . . LowGQX END=25362060 GT ./. chr2 25364219 . T . . LowGQX END=25364319 GT ./. chr2 25366603 . G . . LowGQX END=25366732 GT ./. chr2 25367828 . G . . LowGQX END=25367966 GT ./. chr2 25372537 . G . . LowGQX END=25372637 GT ./. chr2 25374782 . G . . LowGQX END=25374890 GT ./. chr2 25376556 . C . . LowGQX END=25376656 GT ./. chr2 25377103 . G . . LowGQX END=25377210 GT ./. chr2 25383899 . C . . LowGQX END=25384673 GT ./. chr2 25387459 . C . . LowGQX END=25387693 GT ./. chr2 25457146 . C . . LowGQX END=25457292 GT ./. chr2 25458574 . A . . LowGQX END=25458744 GT ./. chr2 25459790 . G . . LowGQX END=25459890 GT ./. chr2 25461992 . C . . LowGQX END=25462092 GT ./. chr2 25462323 . T . . LowGQX END=25462423 GT ./. chr2 25463139 . T . . LowGQX END=25463322 GT ./. chr2 25463505 . C . . LowGQX END=25463605 GT ./. chr2 25464429 . A . . LowGQX END=25464609 GT ./. chr2 25466700 . G . . LowGQX END=25466860 GT ./. chr2 25467022 . A . . LowGQX END=25467210 GT ./. chr2 25467407 . A . . LowGQX END=25467524 GT ./. chr2 25468112 . G . . LowGQX END=25468212 GT ./. chr2 25468862 . G . . LowGQX END=25468962 GT ./. chr2 25469027 . A . . LowGQX END=25469181 GT ./. chr2 25469487 . A . . LowGQX END=25469648 GT ./. chr2 25469918 . A . . LowGQX END=25470030 GT ./. chr2 25470458 . A . . LowGQX END=25470621 GT ./. chr2 25470834 . G . . LowGQX END=25471184 GT ./. chr2 25472510 . G . . LowGQX END=25472610 GT ./. chr2 25474955 . G . . LowGQX END=25475115 GT ./. chr2 25497808 . A . . LowGQX END=25497959 GT ./. chr2 25498287 . T . . LowGQX END=25498441 GT ./. chr2 25505256 . C . . LowGQX END=25505583 GT ./. chr2 25523006 . A . . LowGQX END=25523115 GT ./. chr2 25536709 . C . . LowGQX END=25536868 GT ./. chr2 25551500 . G . . LowGQX END=25551600 GT ./. chr2 25602080 . C . . LowGQX END=25602240 GT ./. chr2 25606666 . T . . LowGQX END=25606766 GT ./. chr2 25610153 . T . . LowGQX END=25610253 GT ./. chr2 25611040 . C . . LowGQX END=25611231 GT ./. chr2 25622275 . T . . LowGQX END=25622375 GT ./. chr2 25642282 . T . . LowGQX END=25642405 GT ./. chr2 25650402 . A . . LowGQX END=25650502 GT ./. chr2 25655702 . A . . LowGQX END=25655869 GT ./. chr2 25656772 . T . . LowGQX END=25656872 GT ./. chr2 25674411 . A . . LowGQX END=25674511 GT ./. chr2 25678269 . C . . LowGQX END=25678369 GT ./. chr2 25705594 . A . . LowGQX END=25705754 GT ./. chr2 25754341 . C . . LowGQX END=25754511 GT ./. chr2 25799706 . C . . LowGQX END=25799874 GT ./. chr2 25803533 . A . . LowGQX END=25803696 GT ./. chr2 25818954 . C . . LowGQX END=25819110 GT ./. chr2 25830098 . T . . LowGQX END=25830198 GT ./. chr2 25851039 . C . . LowGQX END=25851254 GT ./. chr2 25861873 . A . . LowGQX END=25861973 GT ./. chr2 25875446 . A . . LowGQX END=25875546 GT ./. chr2 25964897 . A . . LowGQX END=25967346 GT ./. chr2 25972564 . C . . LowGQX END=25973283 GT ./. chr2 25976402 . C . . LowGQX END=25976509 GT ./. chr2 25978825 . G . . LowGQX END=25978985 GT ./. chr2 25982350 . C . . LowGQX END=25982515 GT ./. chr2 25990451 . C . . LowGQX END=25990596 GT ./. chr2 25991610 . C . . LowGQX END=25991738 GT ./. chr2 25994308 . C . . LowGQX END=25994410 GT ./. chr2 26022223 . A . . LowGQX END=26022405 GT ./. chr2 26029097 . C . . LowGQX END=26029210 GT ./. chr2 26058358 . T . . LowGQX END=26058458 GT ./. chr2 26068112 . A . . LowGQX END=26068212 GT ./. chr2 26068341 . A . . LowGQX END=26068441 GT ./. chr2 26100953 . A . . LowGQX END=26101113 GT ./. chr2 26151844 . T . . LowGQX END=26151944 GT ./. chr2 26152172 . A . . LowGQX END=26152349 GT ./. chr2 26152822 . A . . LowGQX END=26152935 GT ./. chr2 26156971 . G . . LowGQX END=26157071 GT ./. chr2 26161084 . T . . LowGQX END=26161244 GT ./. chr2 26174656 . A . . LowGQX END=26174777 GT ./. chr2 26177134 . A . . LowGQX END=26177257 GT ./. chr2 26178408 . A . . LowGQX END=26178535 GT ./. chr2 26179210 . A . . LowGQX END=26179316 GT ./. chr2 26203240 . A . . LowGQX END=26204789 GT ./. chr2 26257476 . C . . LowGQX END=26257607 GT ./. chr2 26321459 . T . . LowGQX END=26321612 GT ./. chr2 26332635 . A . . LowGQX END=26332778 GT ./. chr2 26350008 . T . . LowGQX END=26350161 GT ./. chr2 26350717 . A . . LowGQX END=26350823 GT ./. chr2 26357799 . T . . LowGQX END=26357899 GT ./. chr2 26396038 . C . . LowGQX END=26396202 GT ./. chr2 26399212 . G . . LowGQX END=26399354 GT ./. chr2 26405302 . G . . LowGQX END=26405402 GT ./. chr2 26405835 . G . . LowGQX END=26405967 GT ./. chr2 26407101 . G . . LowGQX END=26408151 GT ./. chr2 26409057 . G . . LowGQX END=26409246 GT ./. chr2 26410099 . G . . LowGQX END=26411127 GT ./. chr2 26414068 . A . . LowGQX END=26414549 GT ./. chr2 26415128 . G . . LowGQX END=26415345 GT ./. chr2 26416395 . T . . LowGQX END=26416693 GT ./. chr2 26417388 . G . . LowGQX END=26417559 GT ./. chr2 26417910 . T . . LowGQX END=26418153 GT ./. chr2 26420509 . T . . LowGQX END=26420698 GT ./. chr2 26423967 . G . . LowGQX END=26424241 GT ./. chr2 26426880 . C . . LowGQX END=26427117 GT ./. chr2 26432598 . C . . LowGQX END=26432810 GT ./. chr2 26435354 . T . . LowGQX END=26435547 GT ./. chr2 26437261 . T . . LowGQX END=26437482 GT ./. chr2 26437871 . T . . LowGQX END=26438096 GT ./. chr2 26453009 . A . . LowGQX END=26453214 GT ./. chr2 26454977 . A . . LowGQX END=26455199 GT ./. chr2 26457034 . A . . LowGQX END=26457275 GT ./. chr2 26459672 . A . . LowGQX END=26459908 GT ./. chr2 26461751 . C . . LowGQX END=26462063 GT ./. chr2 26467347 . C . . LowGQX END=26467516 GT ./. chr2 26477072 . T . . LowGQX END=26477238 GT ./. chr2 26477240 . A . . LowGQX END=26477394 GT ./. chr2 26483860 . G . . LowGQX END=26483960 GT ./. chr2 26486197 . G . . LowGQX END=26486399 GT ./. chr2 26492770 . T . . LowGQX END=26492917 GT ./. chr2 26496468 . G . . LowGQX END=26496670 GT ./. chr2 26499890 . C . . LowGQX END=26500080 GT ./. chr2 26501431 . T . . LowGQX END=26501721 GT ./. chr2 26501952 . G . . LowGQX END=26502235 GT ./. chr2 26502811 . T . . LowGQX END=26503035 GT ./. chr2 26505662 . G . . LowGQX END=26505971 GT ./. chr2 26506934 . T . . LowGQX END=26507124 GT ./. chr2 26507700 . C . . LowGQX END=26507877 GT ./. chr2 26508224 . T . . LowGQX END=26508491 GT ./. chr2 26512724 . T . . LowGQX END=26512873 GT ./. chr2 26531915 . G . . LowGQX END=26532015 GT ./. chr2 26532370 . C . . LowGQX END=26532470 GT ./. chr2 26532811 . C . . LowGQX END=26532974 GT ./. chr2 26533035 . G . . LowGQX END=26533135 GT ./. chr2 26533559 . C . . LowGQX END=26534943 GT ./. chr2 26535810 . C . . LowGQX END=26535991 GT ./. chr2 26536244 . C . . LowGQX END=26536442 GT ./. chr2 26536627 . C . . LowGQX END=26536772 GT ./. chr2 26537281 . C . . LowGQX END=26537492 GT ./. chr2 26538389 . C . . LowGQX END=26538636 GT ./. chr2 26539142 . C . . LowGQX END=26539317 GT ./. chr2 26539779 . C . . LowGQX END=26539959 GT ./. chr2 26540347 . C . . LowGQX END=26540447 GT ./. chr2 26540827 . C . . LowGQX END=26540992 GT ./. chr2 26541739 . C . . LowGQX END=26541918 GT ./. chr2 26568988 . C . . LowGQX END=26569158 GT ./. chr2 26587099 . C . . LowGQX END=26587254 GT ./. chr2 26587699 . G . . LowGQX END=26587809 GT ./. chr2 26590001 . C . . LowGQX END=26590101 GT ./. chr2 26596234 . G . . LowGQX END=26596498 GT ./. chr2 26597907 . G . . LowGQX END=26598017 GT ./. chr2 26606141 . A . . LowGQX END=26606241 GT ./. chr2 26607826 . G . . LowGQX END=26608008 GT ./. chr2 26609221 . G . . LowGQX END=26609405 GT ./. chr2 26611872 . G . . LowGQX END=26611972 GT ./. chr2 26624826 . A . . LowGQX END=26625015 GT ./. chr2 26637206 . T . . LowGQX END=26637306 GT ./. chr2 26644154 . A . . LowGQX END=26644271 GT ./. chr2 26647137 . A . . LowGQX END=26647325 GT ./. chr2 26652494 . A . . LowGQX END=26652636 GT ./. chr2 26653357 . G . . LowGQX END=26653522 GT ./. chr2 26653648 . T . . LowGQX END=26653748 GT ./. chr2 26654750 . A . . LowGQX END=26654877 GT ./. chr2 26663244 . A . . LowGQX END=26663388 GT ./. chr2 26667048 . C . . LowGQX END=26667227 GT ./. chr2 26667582 . A . . LowGQX END=26667819 GT ./. chr2 26671211 . T . . LowGQX END=26671311 GT ./. chr2 26671557 . A . . LowGQX END=26671674 GT ./. chr2 26672859 . C . . LowGQX END=26672959 GT ./. chr2 26673455 . C . . LowGQX END=26673555 GT ./. chr2 26676186 . A . . LowGQX END=26676420 GT ./. chr2 26677513 . A . . LowGQX END=26677661 GT ./. chr2 26677941 . C . . LowGQX END=26678104 GT ./. chr2 26679308 . C . . LowGQX END=26679408 GT ./. chr2 26680857 . T . . LowGQX END=26681140 GT ./. chr2 26682842 . C . . LowGQX END=26683125 GT ./. chr2 26683464 . A . . LowGQX END=26683667 GT ./. chr2 26683669 . C . . LowGQX END=26683950 GT ./. chr2 26684513 . G . . LowGQX END=26684857 GT ./. chr2 26684900 . A . . LowGQX END=26685101 GT ./. chr2 26686300 . A . . LowGQX END=26686491 GT ./. chr2 26686781 . T . . LowGQX END=26687026 GT ./. chr2 26687686 . T . . LowGQX END=26687949 GT ./. chr2 26688489 . G . . LowGQX END=26688762 GT ./. chr2 26688766 . C . . LowGQX END=26688996 GT ./. chr2 26689531 . A . . LowGQX END=26689771 GT ./. chr2 26689916 . G . . LowGQX END=26690153 GT ./. chr2 26690182 . C . . LowGQX END=26690421 GT ./. chr2 26691225 . A . . LowGQX END=26691394 GT ./. chr2 26693410 . G . . LowGQX END=26693641 GT ./. chr2 26693938 . C . . LowGQX END=26694074 GT ./. chr2 26695312 . T . . LowGQX END=26695569 GT ./. chr2 26695949 . T . . LowGQX END=26696214 GT ./. chr2 26696223 . G . . LowGQX END=26696487 GT ./. chr2 26696808 . G . . LowGQX END=26697030 GT ./. chr2 26697330 . A . . LowGQX END=26697594 GT ./. chr2 26698176 . A . . LowGQX END=26698413 GT ./. chr2 26698731 . G . . LowGQX END=26699237 GT ./. chr2 26699708 . C . . LowGQX END=26699963 GT ./. chr2 26699989 . C . . LowGQX END=26700208 GT ./. chr2 26700233 . T . . LowGQX END=26700426 GT ./. chr2 26700466 . T . . LowGQX END=26700762 GT ./. chr2 26702081 . C . . LowGQX END=26702573 GT ./. chr2 26703020 . G . . LowGQX END=26703231 GT ./. chr2 26703603 . A . . LowGQX END=26703929 GT ./. chr2 26705223 . C . . LowGQX END=26705512 GT ./. chr2 26706279 . T . . LowGQX END=26706568 GT ./. chr2 26707291 . G . . LowGQX END=26707553 GT ./. chr2 26712028 . G . . LowGQX END=26712215 GT ./. chr2 26712495 . G . . LowGQX END=26712660 GT ./. chr2 26717759 . C . . LowGQX END=26717993 GT ./. chr2 26724571 . C . . LowGQX END=26724728 GT ./. chr2 26725117 . C . . LowGQX END=26725346 GT ./. chr2 26726589 . G . . LowGQX END=26726765 GT ./. chr2 26733545 . T . . LowGQX END=26733645 GT ./. chr2 26739235 . C . . LowGQX END=26739519 GT ./. chr2 26741827 . C . . LowGQX END=26742029 GT ./. chr2 26750649 . A . . LowGQX END=26750840 GT ./. chr2 26760533 . G . . LowGQX END=26760694 GT ./. chr2 26781310 . G . . LowGQX END=26781491 GT ./. chr2 26785468 . T . . LowGQX END=26785568 GT ./. chr2 26794952 . T . . LowGQX END=26795052 GT ./. chr2 26798768 . A . . LowGQX END=26799046 GT ./. chr2 26800332 . G . . LowGQX END=26800499 GT ./. chr2 26801634 . T . . LowGQX END=26801734 GT ./. chr2 26802160 . A . . LowGQX END=26802309 GT ./. chr2 26804197 . C . . LowGQX END=26804297 GT ./. chr2 26805688 . C . . LowGQX END=26805788 GT ./. chr2 26806655 . A . . LowGQX END=26806769 GT ./. chr2 26818042 . A . . LowGQX END=26818188 GT ./. chr2 26828345 . A . . LowGQX END=26828445 GT ./. chr2 26846281 . C . . LowGQX END=26846474 GT ./. chr2 26852276 . A . . LowGQX END=26852377 GT ./. chr2 26863369 . G . . LowGQX END=26863469 GT ./. chr2 26864106 . A . . LowGQX END=26864206 GT ./. chr2 26915742 . C . . LowGQX END=26916029 GT ./. chr2 26950533 . A . . LowGQX END=26951439 GT ./. chr2 26987207 . C . . LowGQX END=26987307 GT ./. chr2 26997106 . C . . LowGQX END=26997206 GT ./. chr2 26997910 . A . . LowGQX END=26998086 GT ./. chr2 26998330 . A . . LowGQX END=26998547 GT ./. chr2 26999238 . A . . LowGQX END=26999353 GT ./. chr2 27000908 . A . . LowGQX END=27001382 GT ./. chr2 27009012 . G . . LowGQX END=27009167 GT ./. chr2 27014944 . G . . LowGQX END=27015111 GT ./. chr2 27015344 . G . . LowGQX END=27015444 GT ./. chr2 27015613 . C . . LowGQX END=27015713 GT ./. chr2 27016011 . A . . LowGQX END=27016150 GT ./. chr2 27121366 . A . . LowGQX END=27121631 GT ./. chr2 27147753 . A . . LowGQX END=27147916 GT ./. chr2 27150119 . A . . LowGQX END=27150303 GT ./. chr2 27151108 . C . . LowGQX END=27151208 GT ./. chr2 27154481 . T . . LowGQX END=27154581 GT ./. chr2 27156114 . T . . LowGQX END=27156214 GT ./. chr2 27157444 . A . . LowGQX END=27157605 GT ./. chr2 27162897 . A . . LowGQX END=27163043 GT ./. chr2 27164816 . A . . LowGQX END=27164963 GT ./. chr2 27165409 . A . . LowGQX END=27165621 GT ./. chr2 27167522 . A . . LowGQX END=27167695 GT ./. chr2 27169771 . C . . LowGQX END=27169871 GT ./. chr2 27245085 . G . . LowGQX END=27245210 GT ./. chr2 27246198 . A . . LowGQX END=27246544 GT ./. chr2 27246962 . A . . LowGQX END=27247168 GT ./. chr2 27248449 . A . . LowGQX END=27248638 GT ./. chr2 27248746 . A . . LowGQX END=27248903 GT ./. chr2 27249133 . T . . LowGQX END=27249233 GT ./. chr2 27255861 . C . . LowGQX END=27256037 GT ./. chr2 27256933 . A . . LowGQX END=27257137 GT ./. chr2 27258001 . A . . LowGQX END=27258156 GT ./. chr2 27258460 . A . . LowGQX END=27258599 GT ./. chr2 27258830 . C . . LowGQX END=27258930 GT ./. chr2 27259353 . A . . LowGQX END=27259463 GT ./. chr2 27259564 . C . . LowGQX END=27259664 GT ./. chr2 27259943 . A . . LowGQX END=27260049 GT ./. chr2 27260427 . A . . LowGQX END=27260573 GT ./. chr2 27260613 . A . . LowGQX END=27260772 GT ./. chr2 27260900 . G . . LowGQX END=27261108 GT ./. chr2 27261327 . C . . LowGQX END=27261427 GT ./. chr2 27261568 . A . . LowGQX END=27261686 GT ./. chr2 27261913 . A . . LowGQX END=27262035 GT ./. chr2 27262607 . A . . LowGQX END=27262708 GT ./. chr2 27262896 . A . . LowGQX END=27263069 GT ./. chr2 27263211 . A . . LowGQX END=27263367 GT ./. chr2 27263577 . A . . LowGQX END=27263708 GT ./. chr2 27275825 . C . . LowGQX END=27276044 GT ./. chr2 27276268 . A . . LowGQX END=27276444 GT ./. chr2 27276762 . A . . LowGQX END=27276930 GT ./. chr2 27277496 . A . . LowGQX END=27277678 GT ./. chr2 27277941 . A . . LowGQX END=27278124 GT ./. chr2 27278548 . A . . LowGQX END=27279009 GT ./. chr2 27279489 . A . . LowGQX END=27279663 GT ./. chr2 27280169 . A . . LowGQX END=27280309 GT ./. chr2 27281266 . A . . LowGQX END=27281473 GT ./. chr2 27282056 . A . . LowGQX END=27282340 GT ./. chr2 27290360 . A . . LowGQX END=27290634 GT ./. chr2 27291498 . A . . LowGQX END=27291615 GT ./. chr2 27291890 . T . . LowGQX END=27291990 GT ./. chr2 27292439 . A . . LowGQX END=27292577 GT ./. chr2 27292958 . A . . LowGQX END=27293134 GT ./. chr2 27294216 . T . . LowGQX END=27294331 GT ./. chr2 27301921 . G . . LowGQX END=27302132 GT ./. chr2 27303017 . A . . LowGQX END=27303141 GT ./. chr2 27303598 . A . . LowGQX END=27303823 GT ./. chr2 27304949 . A . . LowGQX END=27306895 GT ./. chr2 27307281 . A . . LowGQX END=27307402 GT ./. chr2 27307818 . A . . LowGQX END=27307918 GT ./. chr2 27308026 . A . . LowGQX END=27308168 GT ./. chr2 27308544 . A . . LowGQX END=27308886 GT ./. chr2 27310077 . C . . LowGQX END=27310271 GT ./. chr2 27315149 . T . . LowGQX END=27315368 GT ./. chr2 27317294 . C . . LowGQX END=27317531 GT ./. chr2 27317617 . G . . LowGQX END=27317854 GT ./. chr2 27319546 . C . . LowGQX END=27319721 GT ./. chr2 27320320 . A . . LowGQX END=27320569 GT ./. chr2 27322013 . G . . LowGQX END=27322204 GT ./. chr2 27322237 . G . . LowGQX END=27322730 GT ./. chr2 27323283 . C . . LowGQX END=27323411 GT ./. chr2 27324140 . A . . LowGQX END=27324759 GT ./. chr2 27324963 . A . . LowGQX END=27325092 GT ./. chr2 27325214 . G . . LowGQX END=27325314 GT ./. chr2 27325377 . C . . LowGQX END=27325477 GT ./. chr2 27327153 . A . . LowGQX END=27327601 GT ./. chr2 27346809 . A . . LowGQX END=27347105 GT ./. chr2 27351230 . C . . LowGQX END=27351472 GT ./. chr2 27351811 . A . . LowGQX END=27351998 GT ./. chr2 27352157 . G . . LowGQX END=27352257 GT ./. chr2 27352380 . A . . LowGQX END=27352497 GT ./. chr2 27352620 . A . . LowGQX END=27352798 GT ./. chr2 27352948 . G . . LowGQX END=27353048 GT ./. chr2 27353095 . C . . LowGQX END=27353287 GT ./. chr2 27353399 . A . . LowGQX END=27353615 GT ./. chr2 27354238 . G . . LowGQX END=27354379 GT ./. chr2 27354538 . A . . LowGQX END=27354702 GT ./. chr2 27354865 . C . . LowGQX END=27354965 GT ./. chr2 27355072 . C . . LowGQX END=27355274 GT ./. chr2 27355469 . A . . LowGQX END=27355598 GT ./. chr2 27355702 . G . . LowGQX END=27355802 GT ./. chr2 27355983 . A . . LowGQX END=27356208 GT ./. chr2 27356398 . A . . LowGQX END=27356592 GT ./. chr2 27357153 . A . . LowGQX END=27357292 GT ./. chr2 27359957 . A . . LowGQX END=27361200 GT ./. chr2 27372000 . G . . LowGQX END=27372226 GT ./. chr2 27372557 . G . . LowGQX END=27372657 GT ./. chr2 27372989 . A . . LowGQX END=27373236 GT ./. chr2 27375554 . A . . LowGQX END=27375738 GT ./. chr2 27423302 . C . . LowGQX END=27423450 GT ./. chr2 27423864 . A . . LowGQX END=27423984 GT ./. chr2 27424216 . A . . LowGQX END=27424324 GT ./. chr2 27424532 . A . . LowGQX END=27424718 GT ./. chr2 27424850 . A . . LowGQX END=27424950 GT ./. chr2 27425609 . C . . LowGQX END=27425765 GT ./. chr2 27426099 . A . . LowGQX END=27426216 GT ./. chr2 27426642 . G . . LowGQX END=27426742 GT ./. chr2 27427327 . A . . LowGQX END=27427461 GT ./. chr2 27427657 . A . . LowGQX END=27427802 GT ./. chr2 27428216 . A . . LowGQX END=27428406 GT ./. chr2 27428878 . G . . LowGQX END=27428978 GT ./. chr2 27429327 . G . . LowGQX END=27429427 GT ./. chr2 27429728 . A . . LowGQX END=27429828 GT ./. chr2 27430124 . A . . LowGQX END=27430521 GT ./. chr2 27435000 . C . . LowGQX END=27435340 GT ./. chr2 27436043 . A . . LowGQX END=27436169 GT ./. chr2 27438175 . C . . LowGQX END=27438275 GT ./. chr2 27438328 . T . . LowGQX END=27438428 GT ./. chr2 27438498 . A . . LowGQX END=27438624 GT ./. chr2 27439389 . A . . LowGQX END=27439491 GT ./. chr2 27439710 . A . . LowGQX END=27439819 GT ./. chr2 27440357 . C . . LowGQX END=27440511 GT ./. chr2 27440743 . A . . LowGQX END=27440887 GT ./. chr2 27444084 . A . . LowGQX END=27444218 GT ./. chr2 27445060 . A . . LowGQX END=27445207 GT ./. chr2 27445385 . A . . LowGQX END=27445531 GT ./. chr2 27445732 . A . . LowGQX END=27445908 GT ./. chr2 27446429 . A . . LowGQX END=27446619 GT ./. chr2 27446783 . A . . LowGQX END=27446900 GT ./. chr2 27447211 . A . . LowGQX END=27447361 GT ./. chr2 27447611 . A . . LowGQX END=27447747 GT ./. chr2 27447876 . A . . LowGQX END=27448114 GT ./. chr2 27448571 . A . . LowGQX END=27448797 GT ./. chr2 27448997 . A . . LowGQX END=27449190 GT ./. chr2 27449391 . A . . LowGQX END=27449520 GT ./. chr2 27449698 . A . . LowGQX END=27449833 GT ./. chr2 27454334 . A . . LowGQX END=27454451 GT ./. chr2 27454846 . A . . LowGQX END=27455095 GT ./. chr2 27455314 . A . . LowGQX END=27455565 GT ./. chr2 27455908 . A . . LowGQX END=27456011 GT ./. chr2 27456178 . A . . LowGQX END=27456407 GT ./. chr2 27456492 . A . . LowGQX END=27456679 GT ./. chr2 27456874 . A . . LowGQX END=27457097 GT ./. chr2 27457384 . A . . LowGQX END=27457556 GT ./. chr2 27458111 . A . . LowGQX END=27458298 GT ./. chr2 27458402 . A . . LowGQX END=27458511 GT ./. chr2 27459150 . A . . LowGQX END=27459394 GT ./. chr2 27459596 . C . . LowGQX END=27459701 GT ./. chr2 27460245 . A . . LowGQX END=27460416 GT ./. chr2 27460584 . A . . LowGQX END=27460753 GT ./. chr2 27460922 . A . . LowGQX END=27461058 GT ./. chr2 27461297 . A . . LowGQX END=27461503 GT ./. chr2 27461908 . A . . LowGQX END=27462103 GT ./. chr2 27462197 . A . . LowGQX END=27462342 GT ./. chr2 27462563 . A . . LowGQX END=27462669 GT ./. chr2 27463131 . A . . LowGQX END=27463232 GT ./. chr2 27463411 . C . . LowGQX END=27463511 GT ./. chr2 27463752 . A . . LowGQX END=27463852 GT ./. chr2 27463924 . A . . LowGQX END=27464098 GT ./. chr2 27464178 . G . . LowGQX END=27464278 GT ./. chr2 27464777 . A . . LowGQX END=27464994 GT ./. chr2 27465168 . A . . LowGQX END=27465298 GT ./. chr2 27465486 . A . . LowGQX END=27465844 GT ./. chr2 27466064 . A . . LowGQX END=27466164 GT ./. chr2 27466282 . A . . LowGQX END=27466389 GT ./. chr2 27477943 . C . . LowGQX END=27478333 GT ./. chr2 27479252 . A . . LowGQX END=27479391 GT ./. chr2 27479599 . T . . LowGQX END=27479814 GT ./. chr2 27480010 . C . . LowGQX END=27480336 GT ./. chr2 27480771 . A . . LowGQX END=27480929 GT ./. chr2 27481027 . A . . LowGQX END=27481178 GT ./. chr2 27481608 . C . . LowGQX END=27481805 GT ./. chr2 27485627 . G . . LowGQX END=27485838 GT ./. chr2 27486179 . C . . LowGQX END=27486279 GT ./. chr2 27486864 . A . . LowGQX END=27486964 GT ./. chr2 27498023 . G . . LowGQX END=27498123 GT ./. chr2 27499595 . T . . LowGQX END=27499712 GT ./. chr2 27500620 . A . . LowGQX END=27500886 GT ./. chr2 27501054 . A . . LowGQX END=27501203 GT ./. chr2 27503012 . C . . LowGQX END=27503112 GT ./. chr2 27505598 . G . . LowGQX END=27505770 GT ./. chr2 27521433 . A . . LowGQX END=27521610 GT ./. chr2 27522111 . A . . LowGQX END=27522287 GT ./. chr2 27522347 . C . . LowGQX END=27522524 GT ./. chr2 27527825 . A . . LowGQX END=27527925 GT ./. chr2 27528450 . A . . LowGQX END=27528688 GT ./. chr2 27528910 . C . . LowGQX END=27529010 GT ./. chr2 27529079 . A . . LowGQX END=27529208 GT ./. chr2 27529261 . T . . LowGQX END=27529417 GT ./. chr2 27530375 . C . . LowGQX END=27530767 GT ./. chr2 27532712 . G . . LowGQX END=27532901 GT ./. chr2 27534468 . C . . LowGQX END=27534568 GT ./. chr2 27534716 . C . . LowGQX END=27534871 GT ./. chr2 27535031 . T . . LowGQX END=27535166 GT ./. chr2 27535248 . T . . LowGQX END=27535691 GT ./. chr2 27535810 . A . . LowGQX END=27536049 GT ./. chr2 27538947 . A . . LowGQX END=27539054 GT ./. chr2 27539944 . C . . LowGQX END=27540102 GT ./. chr2 27545260 . C . . LowGQX END=27545436 GT ./. chr2 27547259 . T . . LowGQX END=27547359 GT ./. chr2 27549023 . T . . LowGQX END=27549123 GT ./. chr2 27549516 . C . . LowGQX END=27549763 GT ./. chr2 27550042 . A . . LowGQX END=27550154 GT ./. chr2 27550872 . A . . LowGQX END=27551059 GT ./. chr2 27551272 . C . . LowGQX END=27551466 GT ./. chr2 27551705 . G . . LowGQX END=27551805 GT ./. chr2 27551986 . A . . LowGQX END=27552152 GT ./. chr2 27552244 . A . . LowGQX END=27552393 GT ./. chr2 27556469 . T . . LowGQX END=27556654 GT ./. chr2 27556804 . A . . LowGQX END=27556904 GT ./. chr2 27558135 . G . . LowGQX END=27558296 GT ./. chr2 27558463 . A . . LowGQX END=27558576 GT ./. chr2 27558782 . A . . LowGQX END=27558898 GT ./. chr2 27559063 . A . . LowGQX END=27559295 GT ./. chr2 27560109 . A . . LowGQX END=27560212 GT ./. chr2 27560337 . C . . LowGQX END=27560437 GT ./. chr2 27560791 . A . . LowGQX END=27560891 GT ./. chr2 27564813 . A . . LowGQX END=27565103 GT ./. chr2 27565691 . A . . LowGQX END=27566017 GT ./. chr2 27566173 . A . . LowGQX END=27566446 GT ./. chr2 27578909 . A . . LowGQX END=27579009 GT ./. chr2 27587216 . G . . LowGQX END=27587518 GT ./. chr2 27587534 . T . . LowGQX END=27587817 GT ./. chr2 27589575 . C . . LowGQX END=27589855 GT ./. chr2 27589890 . T . . LowGQX END=27590166 GT ./. chr2 27590273 . T . . LowGQX END=27590478 GT ./. chr2 27590562 . A . . LowGQX END=27590741 GT ./. chr2 27590841 . G . . LowGQX END=27591058 GT ./. chr2 27591188 . T . . LowGQX END=27591382 GT ./. chr2 27591452 . C . . LowGQX END=27591652 GT ./. chr2 27591822 . G . . LowGQX END=27592131 GT ./. chr2 27592230 . T . . LowGQX END=27592468 GT ./. chr2 27592692 . A . . LowGQX END=27592881 GT ./. chr2 27593099 . C . . LowGQX END=27593233 GT ./. chr2 27593458 . G . . LowGQX END=27593558 GT ./. chr2 27593593 . T . . LowGQX END=27593693 GT ./. chr2 27594073 . G . . LowGQX END=27594233 GT ./. chr2 27595488 . A . . LowGQX END=27595610 GT ./. chr2 27595860 . A . . LowGQX END=27595960 GT ./. chr2 27596097 . T . . LowGQX END=27596197 GT ./. chr2 27596726 . A . . LowGQX END=27596841 GT ./. chr2 27596948 . C . . LowGQX END=27597048 GT ./. chr2 27597207 . C . . LowGQX END=27597307 GT ./. chr2 27597541 . C . . LowGQX END=27597641 GT ./. chr2 27597925 . T . . LowGQX END=27598025 GT ./. chr2 27598371 . A . . LowGQX END=27598579 GT ./. chr2 27598711 . A . . LowGQX END=27598841 GT ./. chr2 27598962 . C . . LowGQX END=27599062 GT ./. chr2 27599168 . G . . LowGQX END=27599268 GT ./. chr2 27599317 . T . . LowGQX END=27599417 GT ./. chr2 27599471 . A . . LowGQX END=27599589 GT ./. chr2 27600251 . A . . LowGQX END=27601973 GT ./. chr2 27602909 . G . . LowGQX END=27603167 GT ./. chr2 27603288 . T . . LowGQX END=27603445 GT ./. chr2 27604464 . T . . LowGQX END=27604675 GT ./. chr2 27604991 . A . . LowGQX END=27605098 GT ./. chr2 27605341 . A . . LowGQX END=27605475 GT ./. chr2 27606231 . A . . LowGQX END=27606470 GT ./. chr2 27606817 . A . . LowGQX END=27606962 GT ./. chr2 27607538 . A . . LowGQX END=27607975 GT ./. chr2 27608612 . A . . LowGQX END=27608749 GT ./. chr2 27609054 . G . . LowGQX END=27609154 GT ./. chr2 27609941 . A . . LowGQX END=27610041 GT ./. chr2 27632118 . C . . LowGQX END=27632292 GT ./. chr2 27656139 . G . . LowGQX END=27656353 GT ./. chr2 27656538 . A . . LowGQX END=27656665 GT ./. chr2 27656854 . A . . LowGQX END=27656960 GT ./. chr2 27657333 . C . . LowGQX END=27657433 GT ./. chr2 27657560 . G . . LowGQX END=27657660 GT ./. chr2 27657998 . A . . LowGQX END=27658098 GT ./. chr2 27658552 . T . . LowGQX END=27658652 GT ./. chr2 27659586 . A . . LowGQX END=27659706 GT ./. chr2 27659894 . G . . LowGQX END=27659994 GT ./. chr2 27660127 . A . . LowGQX END=27660230 GT ./. chr2 27662631 . A . . LowGQX END=27662768 GT ./. chr2 27663268 . A . . LowGQX END=27663378 GT ./. chr2 27663495 . T . . LowGQX END=27663595 GT ./. chr2 27663670 . A . . LowGQX END=27663810 GT ./. chr2 27663971 . G . . LowGQX END=27664071 GT ./. chr2 27664116 . G . . LowGQX END=27664216 GT ./. chr2 27664412 . C . . LowGQX END=27664512 GT ./. chr2 27664573 . A . . LowGQX END=27664682 GT ./. chr2 27665184 . C . . LowGQX END=27665344 GT ./. chr2 27665444 . A . . LowGQX END=27665633 GT ./. chr2 27665689 . A . . LowGQX END=27665789 GT ./. chr2 27665939 . A . . LowGQX END=27666150 GT ./. chr2 27666263 . A . . LowGQX END=27666402 GT ./. chr2 27666814 . A . . LowGQX END=27666926 GT ./. chr2 27667294 . A . . LowGQX END=27667394 GT ./. chr2 27667877 . T . . LowGQX END=27667977 GT ./. chr2 27668161 . A . . LowGQX END=27668319 GT ./. chr2 27668610 . A . . LowGQX END=27668713 GT ./. chr2 27668776 . G . . LowGQX END=27668876 GT ./. chr2 27669125 . A . . LowGQX END=27669225 GT ./. chr2 27670380 . A . . LowGQX END=27670525 GT ./. chr2 27670677 . A . . LowGQX END=27670792 GT ./. chr2 27671780 . A . . LowGQX END=27671901 GT ./. chr2 27672155 . C . . LowGQX END=27672255 GT ./. chr2 27672348 . T . . LowGQX END=27672448 GT ./. chr2 27672556 . A . . LowGQX END=27672670 GT ./. chr2 27672863 . A . . LowGQX END=27672966 GT ./. chr2 27676073 . C . . LowGQX END=27676173 GT ./. chr2 27676249 . A . . LowGQX END=27676383 GT ./. chr2 27676495 . A . . LowGQX END=27676655 GT ./. chr2 27676827 . G . . LowGQX END=27677032 GT ./. chr2 27677204 . T . . LowGQX END=27677304 GT ./. chr2 27677431 . T . . LowGQX END=27677531 GT ./. chr2 27679376 . A . . LowGQX END=27679523 GT ./. chr2 27680504 . A . . LowGQX END=27680625 GT ./. chr2 27680706 . A . . LowGQX END=27680846 GT ./. chr2 27680991 . A . . LowGQX END=27681093 GT ./. chr2 27681641 . C . . LowGQX END=27681741 GT ./. chr2 27682243 . A . . LowGQX END=27682392 GT ./. chr2 27682574 . A . . LowGQX END=27682699 GT ./. chr2 27683872 . T . . LowGQX END=27683972 GT ./. chr2 27684134 . A . . LowGQX END=27684387 GT ./. chr2 27684615 . A . . LowGQX END=27684715 GT ./. chr2 27685565 . T . . LowGQX END=27685665 GT ./. chr2 27685957 . T . . LowGQX END=27686057 GT ./. chr2 27688276 . A . . LowGQX END=27688388 GT ./. chr2 27688611 . A . . LowGQX END=27688752 GT ./. chr2 27693793 . A . . LowGQX END=27693993 GT ./. chr2 27695041 . C . . LowGQX END=27695232 GT ./. chr2 27699501 . T . . LowGQX END=27699601 GT ./. chr2 27700082 . A . . LowGQX END=27700190 GT ./. chr2 27700403 . A . . LowGQX END=27700503 GT ./. chr2 27700860 . A . . LowGQX END=27701026 GT ./. chr2 27702374 . A . . LowGQX END=27702474 GT ./. chr2 27702891 . A . . LowGQX END=27703019 GT ./. chr2 27703911 . A . . LowGQX END=27704130 GT ./. chr2 27706150 . T . . LowGQX END=27706250 GT ./. chr2 27706437 . C . . LowGQX END=27706537 GT ./. chr2 27706722 . T . . LowGQX END=27706822 GT ./. chr2 27707047 . T . . LowGQX END=27707147 GT ./. chr2 27707883 . A . . LowGQX END=27708000 GT ./. chr2 27708225 . A . . LowGQX END=27708373 GT ./. chr2 27712452 . A . . LowGQX END=27712552 GT ./. chr2 27715278 . A . . LowGQX END=27715378 GT ./. chr2 27715531 . A . . LowGQX END=27715660 GT ./. chr2 27716251 . C . . LowGQX END=27716351 GT ./. chr2 27716795 . A . . LowGQX END=27717004 GT ./. chr2 27717216 . A . . LowGQX END=27717336 GT ./. chr2 27717372 . A . . LowGQX END=27717549 GT ./. chr2 27719721 . G . . LowGQX END=27719883 GT ./. chr2 27720060 . A . . LowGQX END=27720318 GT ./. chr2 27720378 . C . . LowGQX END=27720549 GT ./. chr2 27721066 . A . . LowGQX END=27721242 GT ./. chr2 27721540 . A . . LowGQX END=27721716 GT ./. chr2 27721958 . T . . LowGQX END=27722127 GT ./. chr2 27722213 . G . . LowGQX END=27722369 GT ./. chr2 27723951 . C . . LowGQX END=27724148 GT ./. chr2 27724557 . G . . LowGQX END=27724678 GT ./. chr2 27726330 . T . . LowGQX END=27726538 GT ./. chr2 27728534 . A . . LowGQX END=27728755 GT ./. chr2 27729297 . T . . LowGQX END=27729498 GT ./. chr2 27729604 . G . . LowGQX END=27729804 GT ./. chr2 27730051 . C . . LowGQX END=27730230 GT ./. chr2 27730497 . T . . LowGQX END=27730696 GT ./. chr2 27730793 . G . . LowGQX END=27731170 GT ./. chr2 27732365 . A . . LowGQX END=27732465 GT ./. chr2 27741604 . T . . LowGQX END=27741856 GT ./. chr2 27745276 . T . . LowGQX END=27745513 GT ./. chr2 27746085 . C . . LowGQX END=27746358 GT ./. chr2 27760293 . A . . LowGQX END=27760438 GT ./. chr2 27788193 . T . . LowGQX END=27788293 GT ./. chr2 27788888 . A . . LowGQX END=27788988 GT ./. chr2 27789154 . A . . LowGQX END=27789254 GT ./. chr2 27789601 . G . . LowGQX END=27790012 GT ./. chr2 27799438 . C . . LowGQX END=27805397 GT ./. chr2 27805945 . C . . LowGQX END=27806045 GT ./. chr2 27806453 . A . . LowGQX END=27806605 GT ./. chr2 27820932 . A . . LowGQX END=27821124 GT ./. chr2 27822448 . A . . LowGQX END=27822548 GT ./. chr2 27822829 . T . . LowGQX END=27822929 GT ./. chr2 27823556 . A . . LowGQX END=27823685 GT ./. chr2 27824217 . T . . LowGQX END=27824317 GT ./. chr2 27825328 . A . . LowGQX END=27825431 GT ./. chr2 27826005 . A . . LowGQX END=27826177 GT ./. chr2 27830700 . T . . LowGQX END=27830909 GT ./. chr2 27838033 . A . . LowGQX END=27838139 GT ./. chr2 27839111 . A . . LowGQX END=27839211 GT ./. chr2 27840338 . A . . LowGQX END=27840441 GT ./. chr2 27844018 . A . . LowGQX END=27844331 GT ./. chr2 27849828 . A . . LowGQX END=27850785 GT ./. chr2 27851257 . T . . LowGQX END=27851631 GT ./. chr2 27851883 . C . . LowGQX END=27852039 GT ./. chr2 27852226 . T . . LowGQX END=27852326 GT ./. chr2 27852723 . C . . LowGQX END=27852823 GT ./. chr2 27853802 . G . . LowGQX END=27853964 GT ./. chr2 27854685 . T . . LowGQX END=27854785 GT ./. chr2 27855469 . A . . LowGQX END=27855569 GT ./. chr2 27857703 . C . . LowGQX END=27857803 GT ./. chr2 27858005 . A . . LowGQX END=27858105 GT ./. chr2 27861050 . A . . LowGQX END=27861150 GT ./. chr2 27861750 . A . . LowGQX END=27861901 GT ./. chr2 27862902 . T . . LowGQX END=27863002 GT ./. chr2 27864077 . A . . LowGQX END=27864177 GT ./. chr2 27865292 . A . . LowGQX END=27865392 GT ./. chr2 27870701 . A . . LowGQX END=27870813 GT ./. chr2 27872975 . C . . LowGQX END=27873075 GT ./. chr2 27876350 . T . . LowGQX END=27876617 GT ./. chr2 27878230 . A . . LowGQX END=27878472 GT ./. chr2 27880210 . A . . LowGQX END=27880539 GT ./. chr2 27883849 . A . . LowGQX END=27884284 GT ./. chr2 27885003 . T . . LowGQX END=27885103 GT ./. chr2 27886618 . T . . LowGQX END=27887447 GT ./. chr2 27887965 . A . . LowGQX END=27888165 GT ./. chr2 27890133 . A . . LowGQX END=27890260 GT ./. chr2 27891475 . C . . LowGQX END=27891575 GT ./. chr2 27891691 . G . . LowGQX END=27891791 GT ./. chr2 27892113 . A . . LowGQX END=27892257 GT ./. chr2 27898397 . A . . LowGQX END=27898562 GT ./. chr2 27900147 . A . . LowGQX END=27900247 GT ./. chr2 27900603 . A . . LowGQX END=27900794 GT ./. chr2 27905113 . A . . LowGQX END=27905229 GT ./. chr2 27907902 . A . . LowGQX END=27908147 GT ./. chr2 27910795 . T . . LowGQX END=27910895 GT ./. chr2 27911495 . T . . LowGQX END=27911651 GT ./. chr2 27916537 . A . . LowGQX END=27916637 GT ./. chr2 27917476 . T . . LowGQX END=27917576 GT ./. chr2 27930447 . A . . LowGQX END=27931033 GT ./. chr2 27994546 . C . . LowGQX END=27994706 GT ./. chr2 27995501 . T . . LowGQX END=27995601 GT ./. chr2 27997289 . A . . LowGQX END=27997400 GT ./. chr2 28002298 . A . . LowGQX END=28002426 GT ./. chr2 28004480 . A . . LowGQX END=28004658 GT ./. chr2 28005439 . G . . LowGQX END=28005562 GT ./. chr2 28032830 . T . . LowGQX END=28032930 GT ./. chr2 28050432 . A . . LowGQX END=28050625 GT ./. chr2 28055481 . C . . LowGQX END=28055700 GT ./. chr2 28065932 . A . . LowGQX END=28066101 GT ./. chr2 28069891 . A . . LowGQX END=28069991 GT ./. chr2 28070829 . T . . LowGQX END=28070983 GT ./. chr2 28081304 . A . . LowGQX END=28081441 GT ./. chr2 28084355 . T . . LowGQX END=28084455 GT ./. chr2 28093648 . G . . LowGQX END=28093758 GT ./. chr2 28113119 . C . . LowGQX END=28113219 GT ./. chr2 28117400 . T . . LowGQX END=28117554 GT ./. chr2 28152688 . A . . LowGQX END=28152788 GT ./. chr2 28210858 . A . . LowGQX END=28210958 GT ./. chr2 28236191 . A . . LowGQX END=28236291 GT ./. chr2 28248091 . A . . LowGQX END=28248290 GT ./. chr2 28268580 . T . . LowGQX END=28268680 GT ./. chr2 28352136 . A . . LowGQX END=28352250 GT ./. chr2 28456010 . G . . LowGQX END=28456183 GT ./. chr2 28460067 . A . . LowGQX END=28460171 GT ./. chr2 28464176 . G . . LowGQX END=28464276 GT ./. chr2 28467639 . T . . LowGQX END=28467739 GT ./. chr2 28521203 . A . . LowGQX END=28521361 GT ./. chr2 28532921 . A . . LowGQX END=28533021 GT ./. chr2 28550139 . A . . LowGQX END=28550303 GT ./. chr2 28561306 . T . . LowGQX END=28561406 GT ./. chr2 28615640 . G . . LowGQX END=28615740 GT ./. chr2 28616529 . C . . LowGQX END=28616692 GT ./. chr2 28626972 . A . . LowGQX END=28627228 GT ./. chr2 28631624 . A . . LowGQX END=28631736 GT ./. chr2 28634745 . G . . LowGQX END=28635318 GT ./. chr2 28718900 . T . . LowGQX END=28719060 GT ./. chr2 28739656 . T . . LowGQX END=28739756 GT ./. chr2 28741317 . T . . LowGQX END=28741417 GT ./. chr2 28742552 . A . . LowGQX END=28742652 GT ./. chr2 28748105 . T . . LowGQX END=28748205 GT ./. chr2 28748743 . G . . LowGQX END=28748843 GT ./. chr2 28752180 . T . . LowGQX END=28752280 GT ./. chr2 28752571 . C . . LowGQX END=28752671 GT ./. chr2 28754969 . A . . LowGQX END=28755069 GT ./. chr2 28761092 . T . . LowGQX END=28761252 GT ./. chr2 28761956 . G . . LowGQX END=28762056 GT ./. chr2 28763221 . T . . LowGQX END=28763321 GT ./. chr2 28764572 . A . . LowGQX END=28764681 GT ./. chr2 28766058 . T . . LowGQX END=28766158 GT ./. chr2 28771350 . C . . LowGQX END=28771450 GT ./. chr2 28771713 . A . . LowGQX END=28771813 GT ./. chr2 28772865 . C . . LowGQX END=28772965 GT ./. chr2 28775777 . C . . LowGQX END=28775877 GT ./. chr2 28785888 . A . . LowGQX END=28785988 GT ./. chr2 28788134 . T . . LowGQX END=28788234 GT ./. chr2 28789635 . C . . LowGQX END=28789735 GT ./. chr2 28796062 . A . . LowGQX END=28796175 GT ./. chr2 28800890 . C . . LowGQX END=28801102 GT ./. chr2 28802485 . T . . LowGQX END=28802585 GT ./. chr2 28804918 . A . . LowGQX END=28805018 GT ./. chr2 28805270 . A . . LowGQX END=28805375 GT ./. chr2 28808619 . G . . LowGQX END=28808719 GT ./. chr2 28812315 . A . . LowGQX END=28812424 GT ./. chr2 28812540 . A . . LowGQX END=28812640 GT ./. chr2 28812858 . G . . LowGQX END=28812958 GT ./. chr2 28813970 . C . . LowGQX END=28814070 GT ./. chr2 28814548 . A . . LowGQX END=28814648 GT ./. chr2 28815465 . G . . LowGQX END=28815625 GT ./. chr2 28816535 . T . . LowGQX END=28816635 GT ./. chr2 28816830 . A . . LowGQX END=28816930 GT ./. chr2 28820784 . G . . LowGQX END=28820944 GT ./. chr2 28821517 . A . . LowGQX END=28821630 GT ./. chr2 28823652 . G . . LowGQX END=28823752 GT ./. chr2 28824110 . T . . LowGQX END=28824210 GT ./. chr2 28824694 . A . . LowGQX END=28824849 GT ./. chr2 28825686 . A . . LowGQX END=28825791 GT ./. chr2 28826824 . T . . LowGQX END=28826924 GT ./. chr2 28827520 . A . . LowGQX END=28827629 GT ./. chr2 28828718 . A . . LowGQX END=28828818 GT ./. chr2 28829349 . T . . LowGQX END=28829449 GT ./. chr2 28836881 . G . . LowGQX END=28836981 GT ./. chr2 28840575 . T . . LowGQX END=28840675 GT ./. chr2 28841188 . T . . LowGQX END=28841288 GT ./. chr2 28843116 . T . . LowGQX END=28843216 GT ./. chr2 28843439 . T . . LowGQX END=28843539 GT ./. chr2 28843693 . A . . LowGQX END=28843848 GT ./. chr2 28847900 . C . . LowGQX END=28848000 GT ./. chr2 28849293 . A . . LowGQX END=28849416 GT ./. chr2 28851413 . C . . LowGQX END=28851513 GT ./. chr2 28851957 . G . . LowGQX END=28852057 GT ./. chr2 28853443 . T . . LowGQX END=28853543 GT ./. chr2 28854901 . A . . LowGQX END=28855010 GT ./. chr2 28855809 . A . . LowGQX END=28855909 GT ./. chr2 28863721 . G . . LowGQX END=28863881 GT ./. chr2 28865722 . A . . LowGQX END=28865930 GT ./. chr2 28974561 . C . . LowGQX END=28974721 GT ./. chr2 28974907 . A . . LowGQX END=28975067 GT ./. chr2 28999715 . A . . LowGQX END=28999851 GT ./. chr2 29001213 . T . . LowGQX END=29001313 GT ./. chr2 29001673 . A . . LowGQX END=29001908 GT ./. chr2 29004532 . T . . LowGQX END=29004872 GT ./. chr2 29006759 . C . . LowGQX END=29006859 GT ./. chr2 29011482 . T . . LowGQX END=29011678 GT ./. chr2 29016727 . A . . LowGQX END=29016866 GT ./. chr2 29022063 . A . . LowGQX END=29022172 GT ./. chr2 29038879 . A . . LowGQX END=29039118 GT ./. chr2 29041894 . A . . LowGQX END=29041994 GT ./. chr2 29045185 . T . . LowGQX END=29045339 GT ./. chr2 29052012 . A . . LowGQX END=29052212 GT ./. chr2 29063025 . C . . LowGQX END=29063355 GT ./. chr2 29072712 . T . . LowGQX END=29072864 GT ./. chr2 29073037 . T . . LowGQX END=29073137 GT ./. chr2 29073183 . A . . LowGQX END=29073283 GT ./. chr2 29073936 . A . . LowGQX END=29074167 GT ./. chr2 29075270 . T . . LowGQX END=29075370 GT ./. chr2 29083982 . A . . LowGQX END=29084177 GT ./. chr2 29087881 . A . . LowGQX END=29087988 GT ./. chr2 29092443 . A . . LowGQX END=29093146 GT ./. chr2 29117564 . A . . LowGQX END=29117790 GT ./. chr2 29124812 . T . . LowGQX END=29124991 GT ./. chr2 29129325 . G . . LowGQX END=29129448 GT ./. chr2 29135455 . G . . LowGQX END=29135577 GT ./. chr2 29136523 . A . . LowGQX END=29136623 GT ./. chr2 29136934 . G . . LowGQX END=29137075 GT ./. chr2 29140708 . G . . LowGQX END=29140862 GT ./. chr2 29145767 . G . . LowGQX END=29145867 GT ./. chr2 29147847 . G . . LowGQX END=29148020 GT ./. chr2 29149327 . T . . LowGQX END=29149427 GT ./. chr2 29149922 . A . . LowGQX END=29150022 GT ./. chr2 29150434 . G . . LowGQX END=29150567 GT ./. chr2 29152444 . G . . LowGQX END=29152577 GT ./. chr2 29152920 . G . . LowGQX END=29153020 GT ./. chr2 29158326 . T . . LowGQX END=29158480 GT ./. chr2 29159697 . T . . LowGQX END=29159854 GT ./. chr2 29160779 . T . . LowGQX END=29160879 GT ./. chr2 29164326 . G . . LowGQX END=29164441 GT ./. chr2 29165163 . T . . LowGQX END=29165263 GT ./. chr2 29169291 . G . . LowGQX END=29169391 GT ./. chr2 29169465 . G . . LowGQX END=29169646 GT ./. chr2 29217665 . C . . LowGQX END=29217765 GT ./. chr2 29221008 . G . . LowGQX END=29221120 GT ./. chr2 29222046 . G . . LowGQX END=29222335 GT ./. chr2 29225401 . G . . LowGQX END=29225504;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 29225505 . C . . LowGQX END=29225569;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:6:60 chr2 29225570 . G . . LowGQX END=29225614;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 29226357 . G . . LowGQX END=29226549 GT ./. chr2 29234240 . C . . LowGQX END=29234394 GT ./. chr2 29237260 . G . . LowGQX END=29237428 GT ./. chr2 29240019 . G . . LowGQX END=29240171 GT ./. chr2 29240657 . G . . LowGQX END=29240823 GT ./. chr2 29245023 . G . . LowGQX END=29245175 GT ./. chr2 29245951 . G . . LowGQX END=29246058 GT ./. chr2 29247004 . G . . LowGQX END=29247241 GT ./. chr2 29249718 . G . . LowGQX END=29249878 GT ./. chr2 29255799 . G . . LowGQX END=29255918 GT ./. chr2 29256311 . A . . LowGQX END=29256430 GT ./. chr2 29258319 . T . . LowGQX END=29258523 GT ./. chr2 29259406 . G . . LowGQX END=29259624 GT ./. chr2 29268189 . G . . LowGQX END=29268405 GT ./. chr2 29274621 . G . . LowGQX END=29274960 GT ./. chr2 29287684 . A . . LowGQX END=29287985 GT ./. chr2 29293409 . T . . LowGQX END=29297179 GT ./. chr2 29344251 . G . . LowGQX END=29344431 GT ./. chr2 29352847 . C . . LowGQX END=29352947 GT ./. chr2 29353664 . A . . LowGQX END=29353764 GT ./. chr2 29354082 . G . . LowGQX END=29354266 GT ./. chr2 29355015 . C . . LowGQX END=29355115 GT ./. chr2 29356519 . A . . LowGQX END=29356685 GT ./. chr2 29358412 . A . . LowGQX END=29358582 GT ./. chr2 29366573 . A . . LowGQX END=29366814 GT ./. chr2 29368096 . A . . LowGQX END=29368236 GT ./. chr2 29375549 . A . . LowGQX END=29375729 GT ./. chr2 29379215 . C . . LowGQX END=29379368 GT ./. chr2 29380057 . T . . LowGQX END=29380277 GT ./. chr2 29383157 . C . . LowGQX END=29383336 GT ./. chr2 29386690 . G . . LowGQX END=29386823 GT ./. chr2 29390325 . C . . LowGQX END=29390425 GT ./. chr2 29397227 . T . . LowGQX END=29397327 GT ./. chr2 29404436 . A . . LowGQX END=29404762 GT ./. chr2 29412356 . G . . LowGQX END=29412472 GT ./. chr2 29416039 . C . . LowGQX END=29416840 GT ./. chr2 29419585 . A . . LowGQX END=29419778 GT ./. chr2 29420347 . A . . LowGQX END=29420594 GT ./. chr2 29429986 . G . . LowGQX END=29430190 GT ./. chr2 29430861 . A . . LowGQX END=29430961 GT ./. chr2 29432601 . G . . LowGQX END=29432796 GT ./. chr2 29436799 . C . . LowGQX END=29436999 GT ./. chr2 29443521 . T . . LowGQX END=29443753 GT ./. chr2 29443857 . A . . LowGQX END=29444104 GT ./. chr2 29445159 . T . . LowGQX END=29445326 GT ./. chr2 29445332 . C . . LowGQX END=29445525 GT ./. chr2 29446157 . C . . LowGQX END=29446446 GT ./. chr2 29448276 . C . . LowGQX END=29448483 GT ./. chr2 29449737 . C . . LowGQX END=29449992 GT ./. chr2 29450389 . T . . LowGQX END=29450590 GT ./. chr2 29451699 . C . . LowGQX END=29451984 GT ./. chr2 29455119 . G . . LowGQX END=29455366 GT ./. chr2 29456380 . A . . LowGQX END=29456614 GT ./. chr2 29462495 . T . . LowGQX END=29462748 GT ./. chr2 29473920 . C . . LowGQX END=29474185 GT ./. chr2 29497914 . C . . LowGQX END=29498145 GT ./. chr2 29498217 . C . . LowGQX END=29498414 GT ./. chr2 29519703 . C . . LowGQX END=29519975 GT ./. chr2 29541119 . G . . LowGQX END=29541322 GT ./. chr2 29543566 . T . . LowGQX END=29543800 GT ./. chr2 29551165 . T . . LowGQX END=29551399 GT ./. chr2 29606547 . C . . LowGQX END=29606777 GT ./. chr2 29754730 . A . . LowGQX END=29755034 GT ./. chr2 29917665 . T . . LowGQX END=29917932 GT ./. chr2 29940392 . T . . LowGQX END=29940615 GT ./. chr2 30142808 . A . . LowGQX END=30143577 GT ./. chr2 30379516 . A . . LowGQX END=30379661 GT ./. chr2 30381483 . A . . LowGQX END=30381712 GT ./. chr2 30454513 . G . . LowGQX END=30454668 GT ./. chr2 30455001 . G . . LowGQX END=30455101 GT ./. chr2 30457269 . A . . LowGQX END=30457378 GT ./. chr2 30480287 . C . . LowGQX END=30480490 GT ./. chr2 30546344 . A . . LowGQX END=30546444 GT ./. chr2 30682477 . A . . LowGQX END=30682591 GT ./. chr2 30699262 . T . . LowGQX END=30699362 GT ./. chr2 30748451 . A . . LowGQX END=30748624 GT ./. chr2 30755980 . A . . LowGQX END=30756186 GT ./. chr2 30775338 . A . . LowGQX END=30775438 GT ./. chr2 30785010 . A . . LowGQX END=30785161 GT ./. chr2 30790924 . A . . LowGQX END=30791045 GT ./. chr2 30828870 . T . . LowGQX END=30829067 GT ./. chr2 30862981 . A . . LowGQX END=30863488 GT ./. chr2 30953589 . G . . LowGQX END=30953689 GT ./. chr2 30954188 . C . . LowGQX END=30954288 GT ./. chr2 30955262 . G . . LowGQX END=30955473 GT ./. chr2 30957303 . T . . LowGQX END=30957403 GT ./. chr2 30959353 . G . . LowGQX END=30959453 GT ./. chr2 30961066 . G . . LowGQX END=30961166 GT ./. chr2 30961245 . T . . LowGQX END=30961345 GT ./. chr2 30964720 . T . . LowGQX END=30964831 GT ./. chr2 30965159 . A . . LowGQX END=30965259 GT ./. chr2 30966248 . C . . LowGQX END=30966451 GT ./. chr2 30966542 . T . . LowGQX END=30966642 GT ./. chr2 30968071 . C . . LowGQX END=30968171 GT ./. chr2 30968545 . A . . LowGQX END=30968645 GT ./. chr2 30973967 . A . . LowGQX END=30974118 GT ./. chr2 30975918 . C . . LowGQX END=30976065 GT ./. chr2 30977143 . G . . LowGQX END=30977243 GT ./. chr2 30980908 . A . . LowGQX END=30981008 GT ./. chr2 30985935 . C . . LowGQX END=30986035 GT ./. chr2 30986997 . C . . LowGQX END=30987173 GT ./. chr2 30993178 . C . . LowGQX END=30993316 GT ./. chr2 30998795 . C . . LowGQX END=30998912 GT ./. chr2 31000419 . T . . LowGQX END=31000519 GT ./. chr2 31009993 . C . . LowGQX END=31010192 GT ./. chr2 31133765 . C . . LowGQX END=31133928 GT ./. chr2 31135087 . A . . LowGQX END=31135211 GT ./. chr2 31146983 . A . . LowGQX END=31147132 GT ./. chr2 31147598 . A . . LowGQX END=31147698 GT ./. chr2 31152258 . T . . LowGQX END=31152358 GT ./. chr2 31154932 . A . . LowGQX END=31155063 GT ./. chr2 31165065 . A . . LowGQX END=31165173 GT ./. chr2 31167717 . C . . LowGQX END=31167817 GT ./. chr2 31168643 . A . . LowGQX END=31168743 GT ./. chr2 31178482 . A . . LowGQX END=31178608 GT ./. chr2 31178761 . C . . LowGQX END=31178861 GT ./. chr2 31181247 . G . . LowGQX END=31181347 GT ./. chr2 31189068 . A . . LowGQX END=31189171 GT ./. chr2 31215702 . A . . LowGQX END=31215876 GT ./. chr2 31301762 . C . . LowGQX END=31301862 GT ./. chr2 31337601 . G . . LowGQX END=31337701 GT ./. chr2 31348019 . C . . LowGQX END=31348120 GT ./. chr2 31355522 . T . . LowGQX END=31355622 GT ./. chr2 31360822 . A . . LowGQX END=31360955 GT ./. chr2 31369759 . A . . LowGQX END=31369859 GT ./. chr2 31397510 . C . . LowGQX END=31397610 GT ./. chr2 31399431 . A . . LowGQX END=31399531 GT ./. chr2 31399891 . C . . LowGQX END=31400009 GT ./. chr2 31400600 . T . . LowGQX END=31400700 GT ./. chr2 31401301 . A . . LowGQX END=31401461 GT ./. chr2 31403784 . A . . LowGQX END=31403884 GT ./. chr2 31409273 . G . . LowGQX END=31409373 GT ./. chr2 31410602 . C . . LowGQX END=31410702 GT ./. chr2 31411152 . C . . LowGQX END=31411252 GT ./. chr2 31412138 . C . . LowGQX END=31412345 GT ./. chr2 31412485 . A . . LowGQX END=31412585 GT ./. chr2 31414219 . T . . LowGQX END=31414319 GT ./. chr2 31414796 . C . . LowGQX END=31414965 GT ./. chr2 31415996 . C . . LowGQX END=31416161 GT ./. chr2 31417262 . C . . LowGQX END=31417362 GT ./. chr2 31420108 . A . . LowGQX END=31420208 GT ./. chr2 31422265 . C . . LowGQX END=31422417 GT ./. chr2 31423316 . C . . LowGQX END=31423492 GT ./. chr2 31424727 . C . . LowGQX END=31424865 GT ./. chr2 31424999 . C . . LowGQX END=31425119 GT ./. chr2 31425921 . G . . LowGQX END=31426021 GT ./. chr2 31428088 . C . . LowGQX END=31428314 GT ./. chr2 31457486 . C . . LowGQX END=31457717 GT ./. chr2 31467138 . A . . LowGQX END=31467319 GT ./. chr2 31472235 . A . . LowGQX END=31472337 GT ./. chr2 31483374 . A . . LowGQX END=31483791 GT ./. chr2 31484413 . A . . LowGQX END=31484582 GT ./. chr2 31489041 . A . . LowGQX END=31489573 GT ./. chr2 31558773 . T . . LowGQX END=31558926 GT ./. chr2 31560456 . G . . LowGQX END=31560735 GT ./. chr2 31562304 . C . . LowGQX END=31562595 GT ./. chr2 31564144 . G . . LowGQX END=31564312 GT ./. chr2 31564998 . T . . LowGQX END=31565215 GT ./. chr2 31567486 . A . . LowGQX END=31567654 GT ./. chr2 31569584 . T . . LowGQX END=31569761 GT ./. chr2 31570337 . C . . LowGQX END=31570568 GT ./. chr2 31571083 . A . . LowGQX END=31571281 GT ./. chr2 31571714 . A . . LowGQX END=31571898 GT ./. chr2 31572501 . G . . LowGQX END=31572749 GT ./. chr2 31572847 . C . . LowGQX END=31573141 GT ./. chr2 31586973 . C . . LowGQX END=31587162 GT ./. chr2 31588272 . T . . LowGQX END=31588462 GT ./. chr2 31588791 . C . . LowGQX END=31589027 GT ./. chr2 31589685 . G . . LowGQX END=31589912 GT ./. chr2 31590776 . A . . LowGQX END=31590975 GT ./. chr2 31591356 . T . . LowGQX END=31591578 GT ./. chr2 31593170 . A . . LowGQX END=31593396 GT ./. chr2 31595043 . C . . LowGQX END=31595315 GT ./. chr2 31596688 . C . . LowGQX END=31596874 GT ./. chr2 31598195 . A . . LowGQX END=31598472 GT ./. chr2 31599868 . T . . LowGQX END=31600155 GT ./. chr2 31602682 . T . . LowGQX END=31602894 GT ./. chr2 31604448 . A . . LowGQX END=31604644 GT ./. chr2 31605816 . C . . LowGQX END=31606070 GT ./. chr2 31606570 . T . . LowGQX END=31606765 GT ./. chr2 31609229 . A . . LowGQX END=31609473 GT ./. chr2 31610626 . A . . LowGQX END=31610815 GT ./. chr2 31611042 . T . . LowGQX END=31611213 GT ./. chr2 31620475 . A . . LowGQX END=31620647 GT ./. chr2 31621388 . C . . LowGQX END=31621617 GT ./. chr2 31624035 . G . . LowGQX END=31624246 GT ./. chr2 31625863 . G . . LowGQX END=31626062 GT ./. chr2 31628722 . C . . LowGQX END=31628882 GT ./. chr2 31637440 . T . . LowGQX END=31637584 GT ./. chr2 31751265 . T . . LowGQX END=31751369 GT ./. chr2 31754336 . G . . LowGQX END=31754528 GT ./. chr2 31756440 . C . . LowGQX END=31756543 GT ./. chr2 31758672 . C . . LowGQX END=31758837 GT ./. chr2 31805689 . C . . LowGQX END=31805970 GT ./. chr2 32093428 . C . . LowGQX END=32093564 GT ./. chr2 32094865 . G . . LowGQX END=32095024 GT ./. chr2 32108393 . T . . LowGQX END=32108544 GT ./. chr2 32117059 . A . . LowGQX END=32117206 GT ./. chr2 32118305 . C . . LowGQX END=32118405 GT ./. chr2 32142993 . A . . LowGQX END=32143109 GT ./. chr2 32145865 . A . . LowGQX END=32145982 GT ./. chr2 32148708 . A . . LowGQX END=32148808 GT ./. chr2 32157121 . A . . LowGQX END=32157221 GT ./. chr2 32168362 . A . . LowGQX END=32168462 GT ./. chr2 32188226 . A . . LowGQX END=32188326 GT ./. chr2 32235237 . C . . LowGQX END=32235337 GT ./. chr2 32248494 . C . . LowGQX END=32248594 GT ./. chr2 32248746 . C . . LowGQX END=32248878 GT ./. chr2 32249181 . T . . LowGQX END=32249340 GT ./. chr2 32254661 . A . . LowGQX END=32254808 GT ./. chr2 32264322 . T . . LowGQX END=32264422 GT ./. chr2 32264458 . A . . LowGQX END=32264558 GT ./. chr2 32288850 . C . . LowGQX END=32289367 GT ./. chr2 32312510 . T . . LowGQX END=32312699 GT ./. chr2 32314540 . A . . LowGQX END=32314726 GT ./. chr2 32323814 . C . . LowGQX END=32324012 GT ./. chr2 32339656 . A . . LowGQX END=32339946 GT ./. chr2 32340720 . A . . LowGQX END=32340956 GT ./. chr2 32341137 . A . . LowGQX END=32341333 GT ./. chr2 32351966 . C . . LowGQX END=32352143 GT ./. chr2 32353426 . T . . LowGQX END=32353600 GT ./. chr2 32361581 . C . . LowGQX END=32361759 GT ./. chr2 32361895 . A . . LowGQX END=32362089 GT ./. chr2 32362127 . T . . LowGQX END=32362309 GT ./. chr2 32366922 . A . . LowGQX END=32367067 GT ./. chr2 32368354 . A . . LowGQX END=32368536 GT ./. chr2 32369955 . A . . PASS END=32370073;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4767:99:60 chr2 32370074 . G A 69698.33 PASS BaseQRankSum=4.725;DP=4796;DS;Dels=0.00;FS=169.364;HRun=1;HaplotypeScore=307.4313;MQ=60;MQ0=0;MQRankSum=-0.058;QD=14.53;ReadPosRankSum=-7.655;SB=-39282.49;TI=NM_014946,NM_199436;GI=SPAST,SPAST;FC=Missense_R562Q,Missense_R530Q;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:2209,2581:4796:99:69698,0,60065:60:99:0.539 chr2 32370075 . A . . PASS END=32370128;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4204:99:60 chr2 32372236 . T . . LowGQX END=32372379 GT ./. chr2 32379392 . A . . LowGQX END=32379617 GT ./. chr2 32390922 . C . . LowGQX END=32391022 GT ./. chr2 32396350 . T . . LowGQX END=32396450 GT ./. chr2 32399125 . T . . LowGQX END=32399225 GT ./. chr2 32400306 . T . . LowGQX END=32400460 GT ./. chr2 32402504 . C . . LowGQX END=32402666 GT ./. chr2 32409270 . T . . LowGQX END=32409425 GT ./. chr2 32412212 . G . . LowGQX END=32412312 GT ./. chr2 32417396 . T . . LowGQX END=32417496 GT ./. chr2 32417955 . G . . LowGQX END=32418055 GT ./. chr2 32418956 . A . . LowGQX END=32419056 GT ./. chr2 32422388 . T . . LowGQX END=32422488 GT ./. chr2 32422774 . A . . LowGQX END=32422898 GT ./. chr2 32429657 . A . . LowGQX END=32429764 GT ./. chr2 32431929 . T . . LowGQX END=32432029 GT ./. chr2 32434547 . T . . LowGQX END=32434647 GT ./. chr2 32445280 . A . . LowGQX END=32445785 GT ./. chr2 32449540 . A . . LowGQX END=32449837 GT ./. chr2 32460468 . A . . LowGQX END=32460640 GT ./. chr2 32461313 . T . . LowGQX END=32461413 GT ./. chr2 32463199 . A . . LowGQX END=32463389 GT ./. chr2 32466039 . C . . LowGQX END=32466250 GT ./. chr2 32474674 . A . . LowGQX END=32476673 GT ./. chr2 32477486 . A . . LowGQX END=32477751 GT ./. chr2 32481795 . T . . LowGQX END=32481895 GT ./. chr2 32503155 . C . . LowGQX END=32503315 GT ./. chr2 32515550 . A . . LowGQX END=32515708 GT ./. chr2 32517244 . A . . LowGQX END=32517420 GT ./. chr2 32523241 . T . . LowGQX END=32523392 GT ./. chr2 32526449 . A . . LowGQX END=32526567 GT ./. chr2 32530556 . A . . LowGQX END=32530698 GT ./. chr2 32532146 . T . . LowGQX END=32532246 GT ./. chr2 32582229 . G . . LowGQX END=32582559 GT ./. chr2 32602655 . G . . LowGQX END=32602838 GT ./. chr2 32605220 . G . . LowGQX END=32605359 GT ./. chr2 32613817 . G . . LowGQX END=32614012 GT ./. chr2 32617106 . G . . LowGQX END=32617219 GT ./. chr2 32620570 . A . . LowGQX END=32620670 GT ./. chr2 32626230 . G . . LowGQX END=32626454 GT ./. chr2 32626530 . G . . LowGQX END=32626692 GT ./. chr2 32631546 . T . . LowGQX END=32631646 GT ./. chr2 32639836 . G . . LowGQX END=32641232 GT ./. chr2 32654173 . T . . LowGQX END=32654364 GT ./. chr2 32655932 . G . . LowGQX END=32656159 GT ./. chr2 32658711 . G . . LowGQX END=32658873 GT ./. chr2 32660559 . T . . LowGQX END=32660659 GT ./. chr2 32661120 . G . . LowGQX END=32661253 GT ./. chr2 32664575 . G . . LowGQX END=32664755 GT ./. chr2 32666396 . G . . LowGQX END=32666531 GT ./. chr2 32667132 . G . . LowGQX END=32667295 GT ./. chr2 32667391 . G . . LowGQX END=32667524 GT ./. chr2 32668558 . G . . LowGQX END=32668658 GT ./. chr2 32670588 . G . . LowGQX END=32670737 GT ./. chr2 32673862 . G . . LowGQX END=32673997 GT ./. chr2 32678875 . G . . LowGQX END=32679011 GT ./. chr2 32688261 . G . . LowGQX END=32688450 GT ./. chr2 32689576 . G . . LowGQX END=32689892 GT ./. chr2 32690132 . G . . LowGQX END=32690233 GT ./. chr2 32692592 . G . . LowGQX END=32692808 GT ./. chr2 32692970 . G . . LowGQX END=32693180 GT ./. chr2 32693504 . G . . LowGQX END=32693852 GT ./. chr2 32694462 . G . . LowGQX END=32694683 GT ./. chr2 32695235 . G . . LowGQX END=32695415 GT ./. chr2 32696081 . G . . LowGQX END=32696193 GT ./. chr2 32698139 . A . . LowGQX END=32698308 GT ./. chr2 32701280 . G . . LowGQX END=32701460 GT ./. chr2 32702435 . G . . LowGQX END=32702652 GT ./. chr2 32703702 . G . . LowGQX END=32703902 GT ./. chr2 32704529 . G . . LowGQX END=32704686 GT ./. chr2 32706387 . G . . LowGQX END=32706522 GT ./. chr2 32707496 . G . . LowGQX END=32707651 GT ./. chr2 32710709 . G . . LowGQX END=32710827 GT ./. chr2 32712713 . G . . LowGQX END=32712869 GT ./. chr2 32713604 . T . . LowGQX END=32713782 GT ./. chr2 32715107 . G . . LowGQX END=32715219 GT ./. chr2 32716491 . G . . LowGQX END=32716626 GT ./. chr2 32718606 . G . . LowGQX END=32718735 GT ./. chr2 32724613 . G . . LowGQX END=32725177 GT ./. chr2 32726779 . G . . LowGQX END=32726956 GT ./. chr2 32727860 . A . . LowGQX END=32727960 GT ./. chr2 32728108 . G . . LowGQX END=32728304 GT ./. chr2 32730071 . G . . LowGQX END=32730273 GT ./. chr2 32733046 . G . . LowGQX END=32733327 GT ./. chr2 32734794 . T . . LowGQX END=32735064 GT ./. chr2 32735592 . G . . LowGQX END=32735702 GT ./. chr2 32737999 . G . . LowGQX END=32738222 GT ./. chr2 32740056 . G . . LowGQX END=32740838 GT ./. chr2 32743289 . C . . LowGQX END=32743500 GT ./. chr2 32743883 . G . . LowGQX END=32744014 GT ./. chr2 32749954 . G . . LowGQX END=32750087 GT ./. chr2 32750510 . T . . LowGQX END=32750696 GT ./. chr2 32754717 . G . . LowGQX END=32754892 GT ./. chr2 32756421 . G . . LowGQX END=32756619 GT ./. chr2 32757157 . G . . LowGQX END=32757370 GT ./. chr2 32768307 . G . . LowGQX END=32768609 GT ./. chr2 32770709 . G . . LowGQX END=32770928 GT ./. chr2 32772916 . G . . LowGQX END=32773082 GT ./. chr2 32774379 . G . . LowGQX END=32774549 GT ./. chr2 32800222 . G . . LowGQX END=32800434 GT ./. chr2 32818981 . G . . LowGQX END=32819128 GT ./. chr2 32820046 . T . . LowGQX END=32820260 GT ./. chr2 32822817 . G . . LowGQX END=32823036 GT ./. chr2 32824805 . G . . LowGQX END=32824968 GT ./. chr2 32828062 . T . . LowGQX END=32828162 GT ./. chr2 32832521 . G . . LowGQX END=32832711 GT ./. chr2 32836514 . G . . LowGQX END=32836650 GT ./. chr2 32842791 . G . . LowGQX END=32842972 GT ./. chr2 32853294 . T . . LowGQX END=32853454 GT ./. chr2 32855588 . A . . LowGQX END=32855770 GT ./. chr2 32858941 . A . . LowGQX END=32859075 GT ./. chr2 32865335 . A . . LowGQX END=32865480 GT ./. chr2 32875196 . A . . LowGQX END=32875303 GT ./. chr2 32889368 . A . . LowGQX END=32889558 GT ./. chr2 32891700 . A . . LowGQX END=32891838 GT ./. chr2 32897337 . A . . LowGQX END=32897454 GT ./. chr2 32903907 . T . . LowGQX END=32904007 GT ./. chr2 32927872 . A . . LowGQX END=32927990 GT ./. chr2 32929905 . A . . LowGQX END=32930005 GT ./. chr2 32958893 . A . . LowGQX END=32958993 GT ./. chr2 32961759 . A . . LowGQX END=32961929 GT ./. chr2 32983357 . A . . LowGQX END=32983589 GT ./. chr2 32991505 . T . . LowGQX END=32991605 GT ./. chr2 33002947 . A . . LowGQX END=33003050 GT ./. chr2 33005091 . T . . LowGQX END=33005191 GT ./. chr2 33007670 . A . . LowGQX END=33007770 GT ./. chr2 33012049 . A . . LowGQX END=33012219 GT ./. chr2 33036089 . A . . LowGQX END=33036291 GT ./. chr2 33037569 . A . . LowGQX END=33037685 GT ./. chr2 33042522 . A . . LowGQX END=33042627 GT ./. chr2 33045881 . A . . LowGQX END=33046008 GT ./. chr2 33172380 . C . . LowGQX END=33172888 GT ./. chr2 33173928 . T . . LowGQX END=33174028 GT ./. chr2 33245974 . A . . LowGQX END=33246276 GT ./. chr2 33335647 . A . . LowGQX END=33335821 GT ./. chr2 33359473 . A . . LowGQX END=33359573 GT ./. chr2 33359803 . T . . LowGQX END=33360030 GT ./. chr2 33411921 . A . . LowGQX END=33412150 GT ./. chr2 33413642 . A . . LowGQX END=33413921 GT ./. chr2 33442617 . A . . LowGQX END=33442724 GT ./. chr2 33447133 . T . . LowGQX END=33447233 GT ./. chr2 33468727 . A . . LowGQX END=33468854 GT ./. chr2 33477742 . A . . LowGQX END=33477914 GT ./. chr2 33482349 . A . . LowGQX END=33482581 GT ./. chr2 33484617 . T . . LowGQX END=33484717 GT ./. chr2 33487787 . A . . LowGQX END=33487894 GT ./. chr2 33488359 . A . . LowGQX END=33488462 GT ./. chr2 33498721 . A . . LowGQX END=33498851 GT ./. chr2 33500030 . A . . LowGQX END=33500160 GT ./. chr2 33500795 . A . . LowGQX END=33500993 GT ./. chr2 33505104 . A . . LowGQX END=33505228 GT ./. chr2 33518225 . A . . LowGQX END=33518352 GT ./. chr2 33525516 . A . . LowGQX END=33525643 GT ./. chr2 33526587 . A . . LowGQX END=33526714 GT ./. chr2 33534499 . A . . LowGQX END=33534669 GT ./. chr2 33540209 . A . . LowGQX END=33540389 GT ./. chr2 33567903 . A . . LowGQX END=33568033 GT ./. chr2 33572432 . A . . LowGQX END=33572580 GT ./. chr2 33585662 . A . . LowGQX END=33585849 GT ./. chr2 33586490 . A . . LowGQX END=33586590 GT ./. chr2 33588455 . A . . LowGQX END=33588588 GT ./. chr2 33589281 . A . . LowGQX END=33589426 GT ./. chr2 33590398 . A . . LowGQX END=33590573 GT ./. chr2 33614249 . A . . LowGQX END=33614376 GT ./. chr2 33622198 . A . . LowGQX END=33622352 GT ./. chr2 33623429 . A . . LowGQX END=33623615 GT ./. chr2 33740189 . A . . LowGQX END=33740289 GT ./. chr2 33741608 . G . . LowGQX END=33741712 GT ./. chr2 33745000 . T . . LowGQX END=33745100 GT ./. chr2 33745619 . G . . LowGQX END=33745752 GT ./. chr2 33747021 . G . . LowGQX END=33747170 GT ./. chr2 33748945 . G . . LowGQX END=33749120 GT ./. chr2 33749498 . G . . LowGQX END=33749616 GT ./. chr2 33752203 . G . . LowGQX END=33752480 GT ./. chr2 33759379 . T . . LowGQX END=33759479 GT ./. chr2 33764160 . G . . LowGQX END=33764287 GT ./. chr2 33768578 . G . . LowGQX END=33768695 GT ./. chr2 33774670 . G . . LowGQX END=33774819 GT ./. chr2 33780566 . A . . LowGQX END=33780666 GT ./. chr2 33783277 . G . . LowGQX END=33783404 GT ./. chr2 33783738 . G . . LowGQX END=33784098 GT ./. chr2 33784649 . A . . LowGQX END=33784749 GT ./. chr2 33787750 . G . . LowGQX END=33787850 GT ./. chr2 33809841 . C . . LowGQX END=33810514 GT ./. chr2 33810545 . T . . LowGQX END=33810767 GT ./. chr2 33811627 . A . . LowGQX END=33811748 GT ./. chr2 33812304 . C . . LowGQX END=33812404 GT ./. chr2 33813130 . T . . LowGQX END=33813230 GT ./. chr2 33813400 . A . . LowGQX END=33813589 GT ./. chr2 33817145 . A . . LowGQX END=33817284 GT ./. chr2 33820514 . G . . LowGQX END=33820754 GT ./. chr2 33824213 . G . . LowGQX END=33824313 GT ./. chr2 33952095 . T . . LowGQX END=33952845 GT ./. chr2 36583434 . G . . LowGQX END=36583769 GT ./. chr2 36605456 . G . . LowGQX END=36605556 GT ./. chr2 36623755 . A . . LowGQX END=36623933 GT ./. chr2 36668399 . A . . LowGQX END=36668646 GT ./. chr2 36669756 . A . . LowGQX END=36669881 GT ./. chr2 36691675 . A . . LowGQX END=36691801 GT ./. chr2 36704030 . A . . LowGQX END=36704217 GT ./. chr2 36706638 . A . . LowGQX END=36706840 GT ./. chr2 36726360 . A . . LowGQX END=36726493 GT ./. chr2 36737124 . A . . LowGQX END=36737285 GT ./. chr2 36739414 . A . . LowGQX END=36739540 GT ./. chr2 36740697 . A . . LowGQX END=36740911 GT ./. chr2 36744468 . A . . LowGQX END=36744688 GT ./. chr2 36749233 . A . . LowGQX END=36749459 GT ./. chr2 36756252 . C . . LowGQX END=36756352 GT ./. chr2 36759000 . C . . LowGQX END=36759165 GT ./. chr2 36764483 . T . . LowGQX END=36764692 GT ./. chr2 36771467 . C . . LowGQX END=36771644 GT ./. chr2 36774125 . A . . LowGQX END=36774325 GT ./. chr2 36775666 . A . . LowGQX END=36775847 GT ./. chr2 36779181 . A . . LowGQX END=36779345 GT ./. chr2 36780264 . C . . LowGQX END=36780364 GT ./. chr2 36781354 . T . . LowGQX END=36781454 GT ./. chr2 36782755 . T . . LowGQX END=36782909 GT ./. chr2 36783112 . C . . LowGQX END=36783212 GT ./. chr2 36785510 . C . . LowGQX END=36785669 GT ./. chr2 36787867 . A . . LowGQX END=36788018 GT ./. chr2 36805739 . C . . LowGQX END=36806009 GT ./. chr2 36808432 . C . . LowGQX END=36808575 GT ./. chr2 36810495 . C . . LowGQX END=36810613 GT ./. chr2 36818045 . C . . LowGQX END=36818155 GT ./. chr2 36825008 . C . . LowGQX END=36825288 GT ./. chr2 36943490 . C . . LowGQX END=36943590 GT ./. chr2 36956552 . A . . LowGQX END=36956652 GT ./. chr2 36970241 . A . . LowGQX END=36970402 GT ./. chr2 36982062 . A . . LowGQX END=36982200 GT ./. chr2 36986110 . A . . LowGQX END=36986315 GT ./. chr2 36994235 . A . . LowGQX END=36994431 GT ./. chr2 37000862 . G . . LowGQX END=37001013 GT ./. chr2 37002128 . C . . LowGQX END=37002228 GT ./. chr2 37008843 . T . . LowGQX END=37008943 GT ./. chr2 37010465 . T . . LowGQX END=37010565 GT ./. chr2 37014270 . A . . LowGQX END=37014422 GT ./. chr2 37014926 . C . . LowGQX END=37015026 GT ./. chr2 37028438 . C . . LowGQX END=37028550 GT ./. chr2 37032579 . A . . LowGQX END=37032810 GT ./. chr2 37035613 . A . . LowGQX END=37036131 GT ./. chr2 37041324 . A . . LowGQX END=37041507 GT ./. chr2 37076597 . C . . LowGQX END=37076771 GT ./. chr2 37076851 . A . . LowGQX END=37076951 GT ./. chr2 37078141 . A . . LowGQX END=37078253 GT ./. chr2 37082353 . A . . LowGQX END=37082498 GT ./. chr2 37084997 . A . . LowGQX END=37085169 GT ./. chr2 37088273 . A . . LowGQX END=37088399 GT ./. chr2 37094931 . A . . LowGQX END=37095031 GT ./. chr2 37096695 . A . . LowGQX END=37096875 GT ./. chr2 37105032 . A . . LowGQX END=37105173 GT ./. chr2 37111033 . A . . LowGQX END=37111221 GT ./. chr2 37113857 . A . . LowGQX END=37113972 GT ./. chr2 37121039 . A . . LowGQX END=37121179 GT ./. chr2 37126634 . A . . LowGQX END=37126804 GT ./. chr2 37129725 . A . . LowGQX END=37129897 GT ./. chr2 37132673 . A . . LowGQX END=37132773 GT ./. chr2 37143208 . A . . LowGQX END=37143308 GT ./. chr2 37152246 . A . . LowGQX END=37152354 GT ./. chr2 37193360 . G . . LowGQX END=37193630 GT ./. chr2 37195614 . C . . LowGQX END=37195783 GT ./. chr2 37208631 . A . . LowGQX END=37208940 GT ./. chr2 37215787 . A . . LowGQX END=37216005 GT ./. chr2 37217789 . A . . LowGQX END=37217945 GT ./. chr2 37227727 . A . . LowGQX END=37227959 GT ./. chr2 37229447 . A . . LowGQX END=37229718 GT ./. chr2 37230683 . A . . LowGQX END=37230832 GT ./. chr2 37232742 . C . . LowGQX END=37232905 GT ./. chr2 37234191 . A . . LowGQX END=37234450 GT ./. chr2 37235677 . C . . LowGQX END=37235994 GT ./. chr2 37240982 . A . . LowGQX END=37241166 GT ./. chr2 37246937 . C . . LowGQX END=37247037 GT ./. chr2 37247796 . A . . LowGQX END=37248006 GT ./. chr2 37255064 . A . . LowGQX END=37255320 GT ./. chr2 37255822 . A . . LowGQX END=37256066 GT ./. chr2 37259770 . A . . LowGQX END=37259919 GT ./. chr2 37264996 . A . . LowGQX END=37265170 GT ./. chr2 37267460 . T . . LowGQX END=37267664 GT ./. chr2 37268274 . A . . LowGQX END=37268438 GT ./. chr2 37276784 . A . . LowGQX END=37276989 GT ./. chr2 37280643 . A . . LowGQX END=37280753 GT ./. chr2 37282190 . T . . LowGQX END=37282290 GT ./. chr2 37283581 . A . . LowGQX END=37283761 GT ./. chr2 37284458 . A . . LowGQX END=37284648 GT ./. chr2 37285592 . A . . LowGQX END=37285706 GT ./. chr2 37286029 . A . . LowGQX END=37286133 GT ./. chr2 37287722 . A . . LowGQX END=37287879 GT ./. chr2 37289080 . A . . LowGQX END=37289196 GT ./. chr2 37291881 . A . . LowGQX END=37292136 GT ./. chr2 37292856 . A . . LowGQX END=37293056 GT ./. chr2 37295822 . A . . LowGQX END=37296076 GT ./. chr2 37297371 . A . . LowGQX END=37297533 GT ./. chr2 37299251 . A . . LowGQX END=37299427 GT ./. chr2 37302626 . A . . LowGQX END=37302780 GT ./. chr2 37304052 . A . . LowGQX END=37304212 GT ./. chr2 37306261 . A . . LowGQX END=37306477 GT ./. chr2 37310389 . C . . LowGQX END=37310560 GT ./. chr2 37315510 . A . . LowGQX END=37315610 GT ./. chr2 37316782 . G . . LowGQX END=37317010 GT ./. chr2 37317743 . A . . LowGQX END=37317895 GT ./. chr2 37319058 . G . . LowGQX END=37319180 GT ./. chr2 37319303 . A . . LowGQX END=37319403 GT ./. chr2 37321224 . G . . LowGQX END=37321339 GT ./. chr2 37322509 . C . . LowGQX END=37322671 GT ./. chr2 37323329 . A . . LowGQX END=37323480 GT ./. chr2 37334414 . C . . LowGQX END=37334541 GT ./. chr2 37334594 . T . . LowGQX END=37334694;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 37336335 . A . . LowGQX END=37336441 GT ./. chr2 37341872 . A . . LowGQX END=37342005 GT ./. chr2 37342324 . G . . LowGQX END=37342424 GT ./. chr2 37347100 . A . . LowGQX END=37347285 GT ./. chr2 37349647 . A . . LowGQX END=37349837 GT ./. chr2 37353430 . A . . LowGQX END=37353600 GT ./. chr2 37362609 . C . . LowGQX END=37362709 GT ./. chr2 37364094 . T . . LowGQX END=37364194 GT ./. chr2 37365410 . T . . LowGQX END=37365510 GT ./. chr2 37365641 . T . . LowGQX END=37365741 GT ./. chr2 37366772 . A . . LowGQX END=37366903 GT ./. chr2 37368664 . G . . LowGQX END=37368847 GT ./. chr2 37373994 . A . . LowGQX END=37374119 GT ./. chr2 37374829 . A . . LowGQX END=37374952 GT ./. chr2 37395036 . T . . LowGQX END=37395211 GT ./. chr2 37398575 . A . . LowGQX END=37398736 GT ./. chr2 37402273 . A . . LowGQX END=37402373 GT ./. chr2 37406549 . T . . LowGQX END=37406730 GT ./. chr2 37410563 . C . . LowGQX END=37410663 GT ./. chr2 37414446 . A . . LowGQX END=37414613 GT ./. chr2 37415583 . A . . LowGQX END=37415784 GT ./. chr2 37426847 . G . . LowGQX END=37426963 GT ./. chr2 37428163 . A . . LowGQX END=37428263 GT ./. chr2 37428776 . T . . LowGQX END=37428876 GT ./. chr2 37428905 . A . . LowGQX END=37429049 GT ./. chr2 37429865 . C . . LowGQX END=37430018 GT ./. chr2 37430021 . A . . LowGQX END=37430173 GT ./. chr2 37438134 . T . . LowGQX END=37438234 GT ./. chr2 37438984 . A . . LowGQX END=37439185 GT ./. chr2 37439457 . G . . LowGQX END=37439557 GT ./. chr2 37440954 . C . . LowGQX END=37441107 GT ./. chr2 37442013 . A . . LowGQX END=37442113 GT ./. chr2 37443268 . A . . LowGQX END=37443368 GT ./. chr2 37443457 . A . . LowGQX END=37443564 GT ./. chr2 37444104 . C . . LowGQX END=37444204 GT ./. chr2 37447523 . T . . LowGQX END=37447623 GT ./. chr2 37449521 . A . . LowGQX END=37449709 GT ./. chr2 37450311 . A . . LowGQX END=37450547 GT ./. chr2 37454685 . A . . LowGQX END=37456182 GT ./. chr2 37458371 . C . . LowGQX END=37458471 GT ./. chr2 37458553 . A . . LowGQX END=37458713 GT ./. chr2 37458786 . C . . LowGQX END=37458955 GT ./. chr2 37459198 . C . . LowGQX END=37459461 GT ./. chr2 37463188 . A . . LowGQX END=37463371 GT ./. chr2 37464849 . T . . LowGQX END=37465062 GT ./. chr2 37468670 . C . . LowGQX END=37468986 GT ./. chr2 37469727 . T . . LowGQX END=37469888 GT ./. chr2 37470955 . G . . LowGQX END=37471168 GT ./. chr2 37473144 . G . . LowGQX END=37473390 GT ./. chr2 37474548 . T . . LowGQX END=37474824 GT ./. chr2 37475227 . C . . LowGQX END=37475545 GT ./. chr2 37480318 . G . . LowGQX END=37480496 GT ./. chr2 37481340 . T . . LowGQX END=37481440 GT ./. chr2 37483803 . A . . LowGQX END=37484075 GT ./. chr2 37486724 . A . . LowGQX END=37486827 GT ./. chr2 37487364 . A . . LowGQX END=37487564 GT ./. chr2 37494571 . A . . LowGQX END=37494731 GT ./. chr2 37495430 . G . . LowGQX END=37495530 GT ./. chr2 37496699 . T . . LowGQX END=37496833 GT ./. chr2 37499441 . A . . LowGQX END=37499600 GT ./. chr2 37501562 . A . . LowGQX END=37501843 GT ./. chr2 37502899 . A . . LowGQX END=37502999 GT ./. chr2 37505007 . A . . LowGQX END=37505135 GT ./. chr2 37506887 . A . . LowGQX END=37507087 GT ./. chr2 37509674 . A . . LowGQX END=37509774 GT ./. chr2 37513318 . A . . LowGQX END=37513515 GT ./. chr2 37516497 . A . . LowGQX END=37516659 GT ./. chr2 37518009 . A . . LowGQX END=37518145 GT ./. chr2 37520274 . A . . LowGQX END=37520417 GT ./. chr2 37543378 . A . . LowGQX END=37543670 GT ./. chr2 37571832 . C . . LowGQX END=37571997 GT ./. chr2 37579930 . A . . LowGQX END=37580081 GT ./. chr2 37586721 . A . . LowGQX END=37587004 GT ./. chr2 37594373 . A . . LowGQX END=37594554 GT ./. chr2 37595744 . T . . LowGQX END=37595844 GT ./. chr2 37596826 . A . . LowGQX END=37596930 GT ./. chr2 37599497 . A . . LowGQX END=37599618 GT ./. chr2 37599823 . A . . LowGQX END=37599973 GT ./. chr2 37872964 . T . . LowGQX END=37873733 GT ./. chr2 38156420 . A . . LowGQX END=38156873 GT ./. chr2 38177618 . G . . LowGQX END=38177781 GT ./. chr2 38178374 . A . . LowGQX END=38179436 GT ./. chr2 38201161 . A . . LowGQX END=38201360 GT ./. chr2 38202303 . A . . LowGQX END=38202460 GT ./. chr2 38208354 . T . . LowGQX END=38208507 GT ./. chr2 38216672 . T . . LowGQX END=38216772 GT ./. chr2 38218352 . G . . LowGQX END=38218452 GT ./. chr2 38224507 . C . . LowGQX END=38224685 GT ./. chr2 38231111 . C . . LowGQX END=38231211 GT ./. chr2 38231270 . C . . LowGQX END=38231370 GT ./. chr2 38239697 . A . . LowGQX END=38239797 GT ./. chr2 38244306 . A . . LowGQX END=38244406 GT ./. chr2 38244679 . A . . LowGQX END=38244779 GT ./. chr2 38294080 . C . . LowGQX END=38294180 GT ./. chr2 38297814 . T . . LowGQX END=38298505 GT ./. chr2 38301438 . C . . LowGQX END=38302583 GT ./. chr2 38523135 . G . . LowGQX END=38523256 GT ./. chr2 38523623 . G . . LowGQX END=38523735 GT ./. chr2 38523785 . A . . LowGQX END=38523885 GT ./. chr2 38525284 . A . . LowGQX END=38525720 GT ./. chr2 38526325 . T . . LowGQX END=38526536 GT ./. chr2 38527393 . T . . LowGQX END=38527493 GT ./. chr2 38536519 . A . . LowGQX END=38536689 GT ./. chr2 38537409 . T . . LowGQX END=38537592 GT ./. chr2 38540290 . T . . LowGQX END=38540390 GT ./. chr2 38541729 . A . . LowGQX END=38541829 GT ./. chr2 38542402 . A . . LowGQX END=38542554 GT ./. chr2 38545675 . A . . LowGQX END=38545784 GT ./. chr2 38546025 . A . . LowGQX END=38546164 GT ./. chr2 38570388 . T . . LowGQX END=38570718 GT ./. chr2 38581209 . C . . LowGQX END=38581368 GT ./. chr2 38585649 . A . . LowGQX END=38585831 GT ./. chr2 38603240 . T . . LowGQX END=38603340 GT ./. chr2 38604233 . C . . LowGQX END=38604405 GT ./. chr2 38791242 . C . . LowGQX END=38791402 GT ./. chr2 38793246 . C . . LowGQX END=38793263 GT ./. chr2 38793264 . A . . LowGQX END=38793274;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 38793275 . C . . LowGQX END=38793276 GT ./. chr2 38793277 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 38793278 . A . . LowGQX . GT ./. chr2 38793279 . G . . LowGQX END=38793280;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 38793281 . T . . LowGQX . GT ./. chr2 38793282 . G . . LowGQX END=38793284;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 38793285 . C . . LowGQX . GT ./. chr2 38793286 . A . . LowGQX END=38793289;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 38793290 . C . . LowGQX . GT ./. chr2 38793291 . A . . LowGQX END=38793295;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 38793296 . G . . LowGQX END=38793297 GT ./. chr2 38793298 . C . . LowGQX END=38793300;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 38793301 . G . . LowGQX END=38793302 GT ./. chr2 38793303 . A . . LowGQX END=38793309;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 38793310 . G . . LowGQX . GT ./. chr2 38793311 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 38793312 . C . . LowGQX END=38793313 GT ./. chr2 38793314 . A . . LowGQX END=38793315;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 38793316 . C . . LowGQX END=38793317 GT ./. chr2 38793318 . T . . LowGQX END=38793320;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 38793321 . C . . LowGQX . GT ./. chr2 38793322 . C . . LowGQX END=38793330;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 38793331 . G . . LowGQX . GT ./. chr2 38793332 . A . . LowGQX END=38793340;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 38793341 . C . . LowGQX . GT ./. chr2 38793342 . T . . LowGQX END=38793362;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 38793363 . A . . LowGQX . GT ./. chr2 38793364 . G . . LowGQX END=38793366;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 38793367 . G . . LowGQX . GT ./. chr2 38793368 . G . . LowGQX END=38793369;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 38793370 . T . . LowGQX . GT ./. chr2 38793371 . G . . LowGQX END=38793388;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 38793389 . A . . LowGQX END=38793390 GT ./. chr2 38793391 . T . . LowGQX END=38793393;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 38793394 . C . . LowGQX . GT ./. chr2 38793395 . A . . LowGQX END=38793397;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 38795336 . C . . LowGQX END=38795442 GT ./. chr2 38795507 . A . . LowGQX END=38795607 GT ./. chr2 38796273 . A . . LowGQX END=38796479 GT ./. chr2 38796944 . A . . LowGQX END=38797070 GT ./. chr2 38800280 . A . . LowGQX END=38800600 GT ./. chr2 38804589 . C . . LowGQX END=38804689 GT ./. chr2 38805071 . A . . LowGQX END=38805171 GT ./. chr2 38809013 . G . . LowGQX END=38809130 GT ./. chr2 38809212 . A . . LowGQX END=38809318 GT ./. chr2 38810977 . G . . LowGQX END=38811077 GT ./. chr2 38812784 . A . . LowGQX END=38813026 GT ./. chr2 38818670 . A . . LowGQX END=38818793 GT ./. chr2 38826993 . A . . LowGQX END=38827093 GT ./. chr2 38829568 . G . . LowGQX END=38829771 GT ./. chr2 38829954 . G . . LowGQX END=38830054 GT ./. chr2 38893302 . C . . LowGQX END=38893496 GT ./. chr2 38903052 . A . . LowGQX END=38903211 GT ./. chr2 38907136 . C . . LowGQX END=38907296 GT ./. chr2 38908420 . A . . LowGQX END=38908631 GT ./. chr2 38909358 . T . . LowGQX END=38909458 GT ./. chr2 38916946 . T . . LowGQX END=38917046 GT ./. chr2 38925473 . T . . LowGQX END=38925573 GT ./. chr2 38956696 . A . . LowGQX END=38956842 GT ./. chr2 38958875 . A . . LowGQX END=38959054 GT ./. chr2 38960619 . C . . LowGQX END=38960719 GT ./. chr2 38968229 . A . . LowGQX END=38968329 GT ./. chr2 38972253 . C . . LowGQX END=38972353 GT ./. chr2 38973254 . G . . LowGQX END=38973354 GT ./. chr2 38973813 . G . . LowGQX END=38973913 GT ./. chr2 38974193 . G . . LowGQX END=38974293 GT ./. chr2 38975187 . A . . LowGQX END=38975302 GT ./. chr2 38975649 . A . . LowGQX END=38975809 GT ./. chr2 38976257 . G . . LowGQX END=38976357 GT ./. chr2 38976427 . C . . LowGQX END=38976527 GT ./. chr2 38976661 . A . . LowGQX END=38976850 GT ./. chr2 38977154 . A . . LowGQX END=38977339 GT ./. chr2 38978335 . C . . LowGQX END=38978435 GT ./. chr2 39006131 . T . . LowGQX END=39006263 GT ./. chr2 39006388 . T . . LowGQX END=39006584 GT ./. chr2 39008657 . A . . LowGQX END=39009037 GT ./. chr2 39025439 . T . . LowGQX END=39025587 GT ./. chr2 39029855 . A . . LowGQX END=39030060 GT ./. chr2 39033699 . A . . LowGQX END=39033838 GT ./. chr2 39040951 . A . . LowGQX END=39041051 GT ./. chr2 39042661 . A . . LowGQX END=39042800 GT ./. chr2 39043274 . G . . LowGQX END=39043374 GT ./. chr2 39046011 . C . . LowGQX END=39046111 GT ./. chr2 39046189 . A . . LowGQX END=39046289 GT ./. chr2 39050133 . A . . LowGQX END=39050414 GT ./. chr2 39052987 . A . . LowGQX END=39053192 GT ./. chr2 39053656 . A . . LowGQX END=39053834 GT ./. chr2 39055480 . A . . LowGQX END=39055581 GT ./. chr2 39064971 . A . . LowGQX END=39065092 GT ./. chr2 39065883 . T . . LowGQX END=39065983 GT ./. chr2 39070145 . A . . LowGQX END=39070355 GT ./. chr2 39074139 . T . . LowGQX END=39074239 GT ./. chr2 39075409 . A . . LowGQX END=39075547 GT ./. chr2 39081194 . A . . LowGQX END=39081378 GT ./. chr2 39082127 . C . . LowGQX END=39082462 GT ./. chr2 39083480 . A . . LowGQX END=39083606 GT ./. chr2 39085801 . A . . LowGQX END=39086001 GT ./. chr2 39088139 . A . . LowGQX END=39088982 GT ./. chr2 39089285 . A . . LowGQX END=39089478 GT ./. chr2 39090501 . A . . LowGQX END=39090664 GT ./. chr2 39095322 . A . . LowGQX END=39095550 GT ./. chr2 39107779 . A . . LowGQX END=39107879 GT ./. chr2 39108542 . T . . LowGQX END=39108720 GT ./. chr2 39109553 . G . . LowGQX END=39109657 GT ./. chr2 39117007 . T . . LowGQX END=39117107 GT ./. chr2 39146551 . G . . LowGQX END=39146651 GT ./. chr2 39148490 . T . . LowGQX END=39148590 GT ./. chr2 39156047 . G . . LowGQX END=39156213 GT ./. chr2 39156849 . G . . LowGQX END=39156972 GT ./. chr2 39158249 . G . . LowGQX END=39158393 GT ./. chr2 39162896 . A . . LowGQX END=39162996 GT ./. chr2 39164475 . G . . LowGQX END=39164701 GT ./. chr2 39170991 . A . . LowGQX END=39171172 GT ./. chr2 39178129 . G . . LowGQX END=39178263 GT ./. chr2 39180295 . T . . LowGQX END=39180395 GT ./. chr2 39181506 . T . . LowGQX END=39181606 GT ./. chr2 39184039 . G . . LowGQX END=39184189 GT ./. chr2 39185174 . G . . LowGQX END=39185340 GT ./. chr2 39186981 . G . . LowGQX END=39187796 GT ./. chr2 39193146 . G . . LowGQX END=39193287 GT ./. chr2 39198987 . G . . LowGQX END=39199087 GT ./. chr2 39200854 . G . . LowGQX END=39200985 GT ./. chr2 39212914 . G . . LowGQX END=39213498 GT ./. chr2 39214563 . T . . LowGQX END=39214784 GT ./. chr2 39216360 . G . . LowGQX END=39216507 GT ./. chr2 39222213 . C . . LowGQX END=39222580 GT ./. chr2 39224012 . A . . LowGQX END=39224231 GT ./. chr2 39224343 . G . . LowGQX END=39224618 GT ./. chr2 39233502 . G . . LowGQX END=39233722 GT ./. chr2 39234121 . T . . LowGQX END=39234386 GT ./. chr2 39237674 . T . . LowGQX END=39237896 GT ./. chr2 39239216 . A . . LowGQX END=39239541 GT ./. chr2 39240550 . G . . LowGQX END=39240756 GT ./. chr2 39240957 . T . . LowGQX END=39241182 GT ./. chr2 39241855 . C . . LowGQX END=39242039 GT ./. chr2 39249636 . C . . LowGQX END=39250418 GT ./. chr2 39251100 . C . . LowGQX END=39251330 GT ./. chr2 39261929 . G . . LowGQX END=39262029 GT ./. chr2 39262302 . A . . LowGQX END=39262693 GT ./. chr2 39278234 . T . . LowGQX END=39278480 GT ./. chr2 39281704 . T . . LowGQX END=39282016 GT ./. chr2 39283792 . T . . LowGQX END=39284059 GT ./. chr2 39285763 . G . . LowGQX END=39285997 GT ./. chr2 39294718 . A . . LowGQX END=39294946 GT ./. chr2 39347426 . G . . LowGQX END=39347615 GT ./. chr2 39403139 . A . . LowGQX END=39403239 GT ./. chr2 39405687 . T . . LowGQX END=39405901 GT ./. chr2 39406305 . C . . LowGQX END=39406465 GT ./. chr2 39411711 . T . . LowGQX END=39411811 GT ./. chr2 39414760 . C . . LowGQX END=39414860 GT ./. chr2 39417444 . A . . LowGQX END=39417646 GT ./. chr2 39431606 . T . . LowGQX END=39431764 GT ./. chr2 39440528 . A . . LowGQX END=39440628 GT ./. chr2 39452978 . A . . LowGQX END=39453104 GT ./. chr2 39456504 . A . . LowGQX END=39456676 GT ./. chr2 39477753 . C . . LowGQX END=39477853 GT ./. chr2 39478949 . T . . LowGQX END=39479049 GT ./. chr2 39481577 . C . . LowGQX END=39481677 GT ./. chr2 39485486 . T . . LowGQX END=39485637 GT ./. chr2 39485645 . T . . LowGQX END=39485745 GT ./. chr2 39487725 . T . . LowGQX END=39487921 GT ./. chr2 39492342 . A . . LowGQX END=39492502 GT ./. chr2 39494310 . C . . LowGQX END=39494410 GT ./. chr2 39499422 . A . . LowGQX END=39499544 GT ./. chr2 39499604 . T . . LowGQX END=39499704 GT ./. chr2 39505538 . A . . LowGQX END=39505638 GT ./. chr2 39507406 . A . . LowGQX END=39507506 GT ./. chr2 39509572 . A . . LowGQX END=39509725 GT ./. chr2 39513991 . A . . LowGQX END=39514108 GT ./. chr2 39515260 . A . . LowGQX END=39515424 GT ./. chr2 39517405 . T . . LowGQX END=39517505 GT ./. chr2 39519832 . C . . LowGQX END=39519991 GT ./. chr2 39520289 . T . . LowGQX END=39520441 GT ./. chr2 39526864 . T . . LowGQX END=39526964 GT ./. chr2 39535066 . T . . LowGQX END=39535166 GT ./. chr2 39536530 . A . . LowGQX END=39536682 GT ./. chr2 39542441 . A . . LowGQX END=39542541 GT ./. chr2 39552657 . A . . LowGQX END=39552772 GT ./. chr2 39552862 . A . . LowGQX END=39552962 GT ./. chr2 39553022 . T . . LowGQX END=39553122 GT ./. chr2 39553285 . A . . LowGQX END=39553421 GT ./. chr2 39559045 . A . . LowGQX END=39559145 GT ./. chr2 39560635 . A . . LowGQX END=39560735 GT ./. chr2 39564035 . T . . LowGQX END=39564189 GT ./. chr2 39564645 . T . . LowGQX END=39564745 GT ./. chr2 39570512 . T . . LowGQX END=39570612 GT ./. chr2 39583386 . A . . LowGQX END=39583538 GT ./. chr2 39605135 . A . . LowGQX END=39605286 GT ./. chr2 39663971 . G . . LowGQX END=39664131 GT ./. chr2 39893113 . C . . LowGQX END=39893522 GT ./. chr2 39931219 . A . . LowGQX END=39931337 GT ./. chr2 39934187 . A . . LowGQX END=39934329 GT ./. chr2 39944148 . A . . LowGQX END=39944394 GT ./. chr2 39963873 . T . . LowGQX END=39964202 GT ./. chr2 39971508 . A . . LowGQX END=39971668 GT ./. chr2 39982373 . A . . LowGQX END=39982602 GT ./. chr2 39983015 . A . . LowGQX END=39983115 GT ./. chr2 39984450 . C . . LowGQX END=39984550 GT ./. chr2 39988465 . T . . LowGQX END=39988565 GT ./. chr2 39993115 . C . . LowGQX END=39993274 GT ./. chr2 39995502 . A . . LowGQX END=39995653 GT ./. chr2 39996040 . C . . LowGQX END=39996234 GT ./. chr2 39996848 . A . . LowGQX END=39997262 GT ./. chr2 39998643 . A . . LowGQX END=39998833 GT ./. chr2 40006252 . A . . LowGQX END=40006422 GT ./. chr2 40342391 . C . . LowGQX END=40342772 GT ./. chr2 40366539 . A . . LowGQX END=40366819 GT ./. chr2 40387853 . T . . LowGQX END=40388007 GT ./. chr2 40391992 . A . . LowGQX END=40392133 GT ./. chr2 40397406 . T . . LowGQX END=40397506 GT ./. chr2 40401804 . T . . LowGQX END=40401904 GT ./. chr2 40401924 . A . . LowGQX END=40402024 GT ./. chr2 40402362 . A . . LowGQX END=40402462 GT ./. chr2 40403068 . A . . LowGQX END=40403168 GT ./. chr2 40404891 . C . . LowGQX END=40404996 GT ./. chr2 40405471 . G . . LowGQX END=40405685 GT ./. chr2 40564417 . G . . LowGQX END=40564517 GT ./. chr2 40655611 . A . . LowGQX END=40657423 GT ./. chr2 42165698 . C . . LowGQX END=42165798 GT ./. chr2 42174623 . A . . LowGQX END=42174723 GT ./. chr2 42180127 . C . . LowGQX END=42180436 GT ./. chr2 42275328 . G . . LowGQX END=42275981 GT ./. chr2 42280377 . A . . LowGQX END=42280504 GT ./. chr2 42281174 . A . . LowGQX END=42281450 GT ./. chr2 42282071 . T . . LowGQX END=42282171 GT ./. chr2 42282424 . A . . LowGQX END=42282536 GT ./. chr2 42284359 . A . . LowGQX END=42284537 GT ./. chr2 42284736 . C . . LowGQX END=42284836 GT ./. chr2 42396715 . C . . LowGQX END=42396815 GT ./. chr2 42472623 . C . . LowGQX END=42472830 GT ./. chr2 42483639 . A . . LowGQX END=42483773 GT ./. chr2 42488259 . A . . LowGQX END=42488442 GT ./. chr2 42490316 . A . . LowGQX END=42490486 GT ./. chr2 42491754 . A . . LowGQX END=42491909 GT ./. chr2 42492025 . T . . LowGQX END=42492125 GT ./. chr2 42507988 . A . . LowGQX END=42508116 GT ./. chr2 42509931 . T . . LowGQX END=42510115 GT ./. chr2 42511759 . A . . LowGQX END=42511859 GT ./. chr2 42513331 . A . . LowGQX END=42513522 GT ./. chr2 42515365 . A . . LowGQX END=42515465 GT ./. chr2 42522263 . A . . LowGQX END=42522402 GT ./. chr2 42522519 . A . . LowGQX END=42522659 GT ./. chr2 42528349 . T . . LowGQX END=42528535 GT ./. chr2 42530242 . A . . LowGQX END=42530372 GT ./. chr2 42530453 . A . . LowGQX END=42530589 GT ./. chr2 42531608 . T . . LowGQX END=42531708 GT ./. chr2 42543097 . A . . LowGQX END=42543197 GT ./. chr2 42544565 . A . . LowGQX END=42544667 GT ./. chr2 42552322 . C . . LowGQX END=42552422 GT ./. chr2 42552601 . T . . LowGQX END=42552701 GT ./. chr2 42553292 . A . . LowGQX END=42553395 GT ./. chr2 42556024 . A . . LowGQX END=42556159 GT ./. chr2 42556872 . A . . LowGQX END=42557426 GT ./. chr2 42560914 . T . . LowGQX END=42561014 GT ./. chr2 42578357 . A . . LowGQX END=42578502 GT ./. chr2 42580315 . T . . LowGQX END=42580515 GT ./. chr2 42588135 . G . . LowGQX END=42588304 GT ./. chr2 42671072 . C . . LowGQX END=42671722 GT ./. chr2 42719975 . A . . LowGQX END=42720644 GT ./. chr2 42795790 . C . . LowGQX END=42795950 GT ./. chr2 42797561 . C . . LowGQX END=42797661 GT ./. chr2 42806244 . T . . LowGQX END=42806344 GT ./. chr2 42808854 . T . . LowGQX END=42809017 GT ./. chr2 42836597 . G . . LowGQX END=42836725 GT ./. chr2 42867295 . T . . LowGQX END=42867395 GT ./. chr2 42871266 . G . . LowGQX END=42871385 GT ./. chr2 42883339 . G . . LowGQX END=42883443 GT ./. chr2 42886902 . G . . LowGQX END=42887003 GT ./. chr2 42909540 . G . . LowGQX END=42909730 GT ./. chr2 42922834 . A . . LowGQX END=42922992 GT ./. chr2 42924835 . T . . LowGQX END=42924995 GT ./. chr2 42931333 . G . . LowGQX END=42931459 GT ./. chr2 42935042 . G . . LowGQX END=42935195 GT ./. chr2 42936013 . G . . LowGQX END=42936260 GT ./. chr2 42946121 . T . . LowGQX END=42946221 GT ./. chr2 42950028 . G . . LowGQX END=42950176 GT ./. chr2 42979321 . T . . LowGQX END=42979421 GT ./. chr2 42980477 . C . . LowGQX END=42980577 GT ./. chr2 42990046 . C . . LowGQX END=42991322 GT ./. chr2 42994567 . G . . LowGQX END=42994667 GT ./. chr2 42994727 . G . . LowGQX END=42994774 GT ./. chr2 42994775 . G . . LowGQX END=42994823;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 42994824 . A . . LowGQX END=42994827 GT ./. chr2 42994985 . C . . LowGQX END=42995085 GT ./. chr2 42996851 . A . . LowGQX END=42997001 GT ./. chr2 42997255 . G . . LowGQX END=42997355 GT ./. chr2 42997627 . G . . LowGQX END=42997727 GT ./. chr2 43009970 . T . . LowGQX END=43010070 GT ./. chr2 43010452 . A . . LowGQX END=43010563 GT ./. chr2 43010916 . G . . LowGQX END=43011016 GT ./. chr2 43015659 . T . . LowGQX END=43015759 GT ./. chr2 43019527 . A . . LowGQX END=43019687 GT ./. chr2 43393799 . G . . LowGQX END=43393958 GT ./. chr2 43451445 . G . . LowGQX END=43452894 GT ./. chr2 43453320 . G . . LowGQX END=43453532 GT ./. chr2 43454842 . A . . LowGQX END=43455121 GT ./. chr2 43458086 . T . . LowGQX END=43458483 GT ./. chr2 43459851 . C . . LowGQX END=43460022 GT ./. chr2 43506863 . C . . LowGQX END=43507036 GT ./. chr2 43514046 . C . . LowGQX END=43514201 GT ./. chr2 43518821 . A . . LowGQX END=43518921 GT ./. chr2 43519242 . C . . LowGQX END=43519362 GT ./. chr2 43519972 . C . . LowGQX END=43520353 GT ./. chr2 43547582 . T . . LowGQX END=43547682 GT ./. chr2 43571218 . C . . LowGQX END=43571377 GT ./. chr2 43625109 . C . . LowGQX END=43625279 GT ./. chr2 43655238 . C . . LowGQX END=43655371 GT ./. chr2 43657347 . C . . LowGQX END=43657447 GT ./. chr2 43657737 . G . . LowGQX END=43657837 GT ./. chr2 43712369 . T . . LowGQX END=43712469 GT ./. chr2 43725971 . C . . LowGQX END=43726095 GT ./. chr2 43732760 . C . . LowGQX END=43732875 GT ./. chr2 43735786 . C . . LowGQX END=43735920 GT ./. chr2 43755017 . C . . LowGQX END=43755128 GT ./. chr2 43768297 . C . . LowGQX END=43768487 GT ./. chr2 43776348 . C . . LowGQX END=43776538 GT ./. chr2 43778927 . C . . LowGQX END=43779065 GT ./. chr2 43779288 . A . . LowGQX END=43779479 GT ./. chr2 43783472 . A . . LowGQX END=43783695 GT ./. chr2 43787372 . C . . LowGQX END=43787525 GT ./. chr2 43793534 . A . . LowGQX END=43793961 GT ./. chr2 43797526 . C . . LowGQX END=43797655 GT ./. chr2 43798845 . C . . LowGQX END=43799002 GT ./. chr2 43799952 . C . . LowGQX END=43800132 GT ./. chr2 43801474 . C . . LowGQX END=43802167 GT ./. chr2 43804160 . C . . LowGQX END=43804382 GT ./. chr2 43805649 . T . . LowGQX END=43805749 GT ./. chr2 43808859 . T . . LowGQX END=43809068 GT ./. chr2 43813514 . C . . LowGQX END=43813614 GT ./. chr2 43813807 . A . . LowGQX END=43813907 GT ./. chr2 43813992 . C . . LowGQX END=43814142 GT ./. chr2 43817962 . C . . LowGQX END=43818094 GT ./. chr2 43819088 . T . . LowGQX END=43819188 GT ./. chr2 43819444 . G . . LowGQX END=43819544 GT ./. chr2 43871811 . A . . LowGQX END=43871938 GT ./. chr2 43902513 . C . . LowGQX END=43903462 GT ./. chr2 43905984 . T . . LowGQX END=43906084 GT ./. chr2 43906585 . C . . LowGQX END=43906747 GT ./. chr2 43919651 . A . . LowGQX END=43919851 GT ./. chr2 43921508 . T . . LowGQX END=43921662 GT ./. chr2 43922273 . T . . LowGQX END=43922373 GT ./. chr2 43924308 . A . . LowGQX END=43924498 GT ./. chr2 43926784 . A . . LowGQX END=43927750 GT ./. chr2 43931108 . C . . LowGQX END=43931208 GT ./. chr2 43933399 . A . . LowGQX END=43933559 GT ./. chr2 43934538 . A . . LowGQX END=43934687 GT ./. chr2 43937127 . A . . LowGQX END=43937268 GT ./. chr2 43937357 . A . . LowGQX END=43937472 GT ./. chr2 43937606 . T . . LowGQX END=43937805 GT ./. chr2 43939341 . A . . LowGQX END=43939552 GT ./. chr2 43947746 . G . . LowGQX END=43947899 GT ./. chr2 43953409 . A . . LowGQX END=43953609 GT ./. chr2 43956774 . A . . LowGQX END=43956887 GT ./. chr2 43958577 . C . . LowGQX END=43958744 GT ./. chr2 43965478 . A . . LowGQX END=43965662 GT ./. chr2 43968083 . A . . LowGQX END=43968199 GT ./. chr2 43969878 . A . . LowGQX END=43970060 GT ./. chr2 43970971 . A . . LowGQX END=43971131 GT ./. chr2 43973003 . A . . LowGQX END=43973105 GT ./. chr2 43980756 . A . . LowGQX END=43980936 GT ./. chr2 43984256 . A . . LowGQX END=43984406 GT ./. chr2 43986037 . A . . LowGQX END=43986171 GT ./. chr2 43989437 . T . . LowGQX END=43989537 GT ./. chr2 43991365 . A . . LowGQX END=43991544 GT ./. chr2 43992550 . A . . LowGQX END=43992740 GT ./. chr2 44001232 . T . . LowGQX END=44001332 GT ./. chr2 44002787 . T . . LowGQX END=44002938 GT ./. chr2 44003919 . A . . LowGQX END=44004041 GT ./. chr2 44008736 . T . . LowGQX END=44008904 GT ./. chr2 44010567 . A . . LowGQX END=44010727 GT ./. chr2 44014305 . G . . LowGQX END=44014405 GT ./. chr2 44016767 . T . . LowGQX END=44016867 GT ./. chr2 44019814 . G . . LowGQX END=44019930 GT ./. chr2 44021594 . A . . LowGQX END=44021882 GT ./. chr2 44022955 . G . . LowGQX END=44023113 GT ./. chr2 44023846 . T . . LowGQX END=44023946 GT ./. chr2 44027969 . T . . LowGQX END=44028069 GT ./. chr2 44028764 . T . . LowGQX END=44028864 GT ./. chr2 44031779 . A . . LowGQX END=44031881 GT ./. chr2 44032291 . A . . LowGQX END=44032398 GT ./. chr2 44036772 . A . . LowGQX END=44036926 GT ./. chr2 44040204 . A . . LowGQX END=44040500 GT ./. chr2 44041565 . T . . LowGQX END=44041780 GT ./. chr2 44047003 . C . . LowGQX END=44047291 GT ./. chr2 44049885 . C . . LowGQX END=44050126 GT ./. chr2 44051001 . A . . LowGQX END=44051623 GT ./. chr2 44051977 . T . . LowGQX END=44052209 GT ./. chr2 44053470 . T . . LowGQX END=44053712 GT ./. chr2 44055071 . A . . LowGQX END=44055306 GT ./. chr2 44055510 . C . . LowGQX END=44055667 GT ./. chr2 44058857 . G . . LowGQX END=44059274 GT ./. chr2 44064922 . G . . LowGQX END=44065146 GT ./. chr2 44065625 . G . . LowGQX END=44065870 GT ./. chr2 44066142 . G . . LowGQX END=44066307 GT ./. chr2 44071595 . A . . LowGQX END=44071799 GT ./. chr2 44073243 . G . . LowGQX END=44073502 GT ./. chr2 44078672 . C . . LowGQX END=44079013 GT ./. chr2 44079442 . A . . LowGQX END=44079677 GT ./. chr2 44079687 . G . . LowGQX END=44080059 GT ./. chr2 44099064 . A . . LowGQX END=44099497 GT ./. chr2 44100875 . C . . LowGQX END=44101177 GT ./. chr2 44101495 . T . . LowGQX END=44101674 GT ./. chr2 44102234 . A . . LowGQX END=44102604 GT ./. chr2 44104649 . A . . LowGQX END=44105104 GT ./. chr2 44115688 . T . . LowGQX END=44115847 GT ./. chr2 44116822 . T . . LowGQX END=44117067 GT ./. chr2 44117450 . C . . LowGQX END=44117550 GT ./. chr2 44121633 . A . . LowGQX END=44121820 GT ./. chr2 44123722 . G . . LowGQX END=44123899 GT ./. chr2 44126307 . T . . LowGQX END=44126525 GT ./. chr2 44126554 . A . . LowGQX END=44126796 GT ./. chr2 44128408 . A . . LowGQX END=44128715 GT ./. chr2 44132780 . A . . LowGQX END=44132971 GT ./. chr2 44139520 . A . . LowGQX END=44139749 GT ./. chr2 44145113 . T . . LowGQX END=44145324 GT ./. chr2 44145344 . C . . LowGQX END=44145589 GT ./. chr2 44152155 . A . . LowGQX END=44152348 GT ./. chr2 44152981 . G . . LowGQX END=44153152 GT ./. chr2 44161278 . A . . LowGQX END=44161487 GT ./. chr2 44161842 . T . . LowGQX END=44162069 GT ./. chr2 44170775 . G . . LowGQX END=44171085 GT ./. chr2 44172420 . C . . LowGQX END=44172608 GT ./. chr2 44173201 . C . . LowGQX END=44173434 GT ./. chr2 44174345 . T . . LowGQX END=44174561 GT ./. chr2 44174819 . C . . LowGQX END=44174966 GT ./. chr2 44175210 . G . . LowGQX END=44175390 GT ./. chr2 44175500 . A . . LowGQX END=44175709 GT ./. chr2 44176680 . C . . LowGQX END=44176850 GT ./. chr2 44177661 . G . . LowGQX END=44177796 GT ./. chr2 44184467 . A . . LowGQX END=44184642 GT ./. chr2 44186303 . T . . LowGQX END=44186403 GT ./. chr2 44187629 . A . . LowGQX END=44187825 GT ./. chr2 44190663 . A . . LowGQX END=44190897 GT ./. chr2 44200695 . G . . LowGQX END=44201091 GT ./. chr2 44201238 . C . . LowGQX END=44201486 GT ./. chr2 44201702 . A . . LowGQX END=44201949 GT ./. chr2 44202179 . C . . LowGQX END=44202408 GT ./. chr2 44203231 . G . . LowGQX END=44203420 GT ./. chr2 44204082 . T . . LowGQX END=44204467 GT ./. chr2 44206914 . A . . LowGQX END=44207139 GT ./. chr2 44209326 . C . . LowGQX END=44209625 GT ./. chr2 44222876 . A . . LowGQX END=44223138 GT ./. chr2 44428337 . A . . LowGQX END=44429187 GT ./. chr2 44436347 . A . . LowGQX END=44436487 GT ./. chr2 44445104 . A . . LowGQX END=44445263 GT ./. chr2 44445547 . A . . LowGQX END=44445698 GT ./. chr2 44445977 . A . . LowGQX END=44446077 GT ./. chr2 44457086 . G . . LowGQX END=44457186 GT ./. chr2 44457550 . A . . LowGQX END=44457860 GT ./. chr2 44459420 . T . . LowGQX END=44459520 GT ./. chr2 44471367 . A . . LowGQX END=44471526 GT ./. chr2 44502624 . T . . LowGQX END=44503156 GT ./. chr2 44507804 . T . . LowGQX END=44508086 GT ./. chr2 44508475 . T . . LowGQX END=44508732 GT ./. chr2 44512779 . A . . LowGQX END=44512879 GT ./. chr2 44513120 . G . . LowGQX END=44513348 GT ./. chr2 44527059 . G . . LowGQX END=44527281 GT ./. chr2 44528091 . G . . LowGQX END=44528337 GT ./. chr2 44531217 . C . . LowGQX END=44531529 GT ./. chr2 44539674 . T . . LowGQX END=44539947 GT ./. chr2 44540923 . T . . LowGQX END=44541180 GT ./. chr2 44545194 . T . . LowGQX END=44545345 GT ./. chr2 44547287 . A . . LowGQX END=44547831 GT ./. chr2 44548490 . G . . LowGQX END=44548590 GT ./. chr2 44548846 . C . . LowGQX END=44549042 GT ./. chr2 44549868 . A . . LowGQX END=44549996 GT ./. chr2 44550399 . A . . LowGQX END=44550553 GT ./. chr2 44553849 . A . . LowGQX END=44554070 GT ./. chr2 44556074 . A . . LowGQX END=44556254 GT ./. chr2 44559596 . A . . LowGQX END=44559798 GT ./. chr2 44565468 . A . . LowGQX END=44565678 GT ./. chr2 44566284 . A . . LowGQX END=44566505 GT ./. chr2 44569554 . A . . LowGQX END=44569694 GT ./. chr2 44570882 . A . . LowGQX END=44571093 GT ./. chr2 44571643 . A . . LowGQX END=44571743 GT ./. chr2 44573405 . A . . LowGQX END=44573575 GT ./. chr2 44586634 . A . . LowGQX END=44586857 GT ./. chr2 44589114 . G . . LowGQX END=44589325 GT ./. chr2 44599853 . A . . LowGQX END=44600053 GT ./. chr2 44617308 . T . . LowGQX END=44617463 GT ./. chr2 44621976 . G . . LowGQX END=44622076 GT ./. chr2 44622124 . T . . LowGQX END=44622224 GT ./. chr2 44683668 . A . . LowGQX END=44683768 GT ./. chr2 44776606 . C . . LowGQX END=44776766 GT ./. chr2 44858537 . A . . LowGQX END=44858697 GT ./. chr2 44931403 . A . . LowGQX END=44931503 GT ./. chr2 44933404 . C . . LowGQX END=44933504 GT ./. chr2 44934466 . C . . LowGQX END=44934620 GT ./. chr2 44942410 . T . . LowGQX END=44942510 GT ./. chr2 44970689 . A . . LowGQX END=44970849 GT ./. chr2 44981176 . C . . LowGQX END=44981276 GT ./. chr2 44993527 . T . . LowGQX END=44993703 GT ./. chr2 44999164 . A . . LowGQX END=44999264 GT ./. chr2 45169193 . C . . LowGQX END=45170101 GT ./. chr2 45171656 . C . . LowGQX END=45171951 GT ./. chr2 45233258 . A . . LowGQX END=45233676 GT ./. chr2 45235639 . C . . LowGQX END=45236301 GT ./. chr2 45616447 . A . . LowGQX END=45616741 GT ./. chr2 45620082 . A . . LowGQX END=45620271 GT ./. chr2 45640251 . A . . LowGQX END=45640435 GT ./. chr2 45645502 . A . . LowGQX END=45645683 GT ./. chr2 45646925 . A . . LowGQX END=45647036 GT ./. chr2 45704124 . A . . LowGQX END=45704224 GT ./. chr2 45715317 . G . . LowGQX END=45715475 GT ./. chr2 45773869 . A . . LowGQX END=45773981 GT ./. chr2 45774657 . A . . LowGQX END=45774757 GT ./. chr2 45778262 . A . . LowGQX END=45778452 GT ./. chr2 45780760 . A . . LowGQX END=45780872 GT ./. chr2 45789790 . A . . LowGQX END=45789898 GT ./. chr2 45800344 . A . . LowGQX END=45800524 GT ./. chr2 45801764 . A . . LowGQX END=45801865 GT ./. chr2 45807012 . A . . LowGQX END=45807155 GT ./. chr2 45808830 . A . . LowGQX END=45809000 GT ./. chr2 45812725 . T . . LowGQX END=45812916 GT ./. chr2 45826586 . A . . LowGQX END=45826977 GT ./. chr2 45829040 . A . . LowGQX END=45829225 GT ./. chr2 45832491 . G . . LowGQX END=45832591 GT ./. chr2 45879238 . C . . LowGQX END=45879590 GT ./. chr2 46070121 . T . . LowGQX END=46070221 GT ./. chr2 46203566 . A . . LowGQX END=46203730 GT ./. chr2 46206083 . T . . LowGQX END=46206183 GT ./. chr2 46207428 . T . . LowGQX END=46207528 GT ./. chr2 46211688 . A . . LowGQX END=46211822 GT ./. chr2 46228541 . A . . LowGQX END=46228688 GT ./. chr2 46231679 . A . . LowGQX END=46231780 GT ./. chr2 46234599 . A . . LowGQX END=46234803 GT ./. chr2 46237481 . A . . LowGQX END=46237659 GT ./. chr2 46237800 . T . . LowGQX END=46237900 GT ./. chr2 46313345 . A . . LowGQX END=46313504 GT ./. chr2 46372230 . A . . LowGQX END=46372373 GT ./. chr2 46378178 . A . . LowGQX END=46378343 GT ./. chr2 46378344 . G . . LowGQX END=46378371;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 46386743 . A . . LowGQX END=46386923 GT ./. chr2 46411872 . A . . LowGQX END=46412023 GT ./. chr2 46524994 . A . . LowGQX END=46525128 GT ./. chr2 46573961 . T . . LowGQX END=46574254 GT ./. chr2 46583239 . C . . LowGQX END=46583493 GT ./. chr2 46583812 . C . . LowGQX END=46583999 GT ./. chr2 46587726 . T . . LowGQX END=46587947 GT ./. chr2 46587973 . C . . LowGQX END=46588281 GT ./. chr2 46596915 . C . . LowGQX END=46597124 GT ./. chr2 46602778 . G . . LowGQX END=46603028 GT ./. chr2 46603627 . A . . LowGQX END=46603944 GT ./. chr2 46604982 . G . . LowGQX END=46605278 GT ./. chr2 46605745 . G . . LowGQX END=46605958 GT ./. chr2 46607315 . G . . LowGQX END=46607908 GT ./. chr2 46608684 . G . . LowGQX END=46608913 GT ./. chr2 46609063 . G . . LowGQX END=46609280 GT ./. chr2 46609513 . T . . LowGQX END=46609789 GT ./. chr2 46611597 . T . . LowGQX END=46611851 GT ./. chr2 46706724 . G . . LowGQX END=46706842 GT ./. chr2 46707543 . G . . LowGQX END=46707904 GT ./. chr2 46711382 . G . . LowGQX END=46711565 GT ./. chr2 46739168 . G . . LowGQX END=46739853 GT ./. chr2 46770153 . G . . LowGQX END=46770364 GT ./. chr2 46770873 . C . . LowGQX END=46770973 GT ./. chr2 46787663 . G . . LowGQX END=46787829 GT ./. chr2 46799844 . A . . LowGQX END=46799944 GT ./. chr2 46803224 . A . . LowGQX END=46803393 GT ./. chr2 46803698 . A . . LowGQX END=46803798 GT ./. chr2 46808065 . A . . LowGQX END=46808225 GT ./. chr2 46808615 . A . . LowGQX END=46808733 GT ./. chr2 46815232 . G . . LowGQX END=46815332 GT ./. chr2 46819008 . T . . LowGQX END=46819108 GT ./. chr2 46819612 . A . . LowGQX END=46819725 GT ./. chr2 46839365 . A . . LowGQX END=46839486 GT ./. chr2 46840829 . T . . LowGQX END=46840981 GT ./. chr2 46842074 . A . . LowGQX END=46842306 GT ./. chr2 46844320 . T . . LowGQX END=46844480 GT ./. chr2 46845895 . C . . LowGQX END=46845995 GT ./. chr2 46846744 . A . . LowGQX END=46846844 GT ./. chr2 46850901 . A . . LowGQX END=46851009 GT ./. chr2 46851285 . A . . LowGQX END=46851385 GT ./. chr2 46985668 . C . . LowGQX END=46987283 GT ./. chr2 47043958 . A . . LowGQX END=47044058 GT ./. chr2 47044386 . G . . LowGQX END=47044573 GT ./. chr2 47045295 . C . . LowGQX END=47045395 GT ./. chr2 47049219 . C . . LowGQX END=47049319 GT ./. chr2 47083036 . A . . LowGQX END=47083136 GT ./. chr2 47085224 . G . . LowGQX END=47085350 GT ./. chr2 47132551 . A . . LowGQX END=47132785 GT ./. chr2 47133042 . A . . LowGQX END=47133142 GT ./. chr2 47134898 . C . . LowGQX END=47135160 GT ./. chr2 47136111 . G . . LowGQX END=47136362 GT ./. chr2 47144266 . C . . LowGQX END=47144426 GT ./. chr2 47168645 . C . . LowGQX END=47168885 GT ./. chr2 47177500 . A . . LowGQX END=47177668 GT ./. chr2 47178682 . T . . LowGQX END=47178837 GT ./. chr2 47183976 . A . . LowGQX END=47184149 GT ./. chr2 47185553 . T . . LowGQX END=47185713 GT ./. chr2 47201752 . A . . LowGQX END=47201852 GT ./. chr2 47202110 . A . . LowGQX END=47202245 GT ./. chr2 47205929 . A . . LowGQX END=47206049 GT ./. chr2 47220579 . C . . LowGQX END=47220679 GT ./. chr2 47221494 . A . . LowGQX END=47221656 GT ./. chr2 47222257 . G . . LowGQX END=47222357 GT ./. chr2 47233059 . A . . LowGQX END=47233201 GT ./. chr2 47233772 . C . . LowGQX END=47233872 GT ./. chr2 47238468 . A . . LowGQX END=47238577 GT ./. chr2 47248999 . A . . LowGQX END=47249121 GT ./. chr2 47250526 . T . . LowGQX END=47250626 GT ./. chr2 47251413 . T . . LowGQX END=47251513 GT ./. chr2 47256361 . A . . LowGQX END=47256526 GT ./. chr2 47273452 . A . . LowGQX END=47273573 GT ./. chr2 47274391 . T . . LowGQX END=47274491 GT ./. chr2 47277086 . A . . LowGQX END=47277188 GT ./. chr2 47278883 . A . . LowGQX END=47279022 GT ./. chr2 47287906 . A . . LowGQX END=47288113 GT ./. chr2 47300839 . A . . LowGQX END=47301065 GT ./. chr2 47314146 . T . . LowGQX END=47314270 GT ./. chr2 47317408 . C . . LowGQX END=47317514 GT ./. chr2 47357050 . T . . LowGQX END=47357150 GT ./. chr2 47357308 . C . . LowGQX END=47357408 GT ./. chr2 47378395 . A . . LowGQX END=47378657 GT ./. chr2 47380076 . A . . LowGQX END=47380176 GT ./. chr2 47382301 . C . . LowGQX END=47382401 GT ./. chr2 47387880 . T . . LowGQX END=47387980 GT ./. chr2 47388860 . A . . LowGQX END=47389000 GT ./. chr2 47389423 . A . . LowGQX END=47389534 GT ./. chr2 47389616 . A . . LowGQX END=47389804 GT ./. chr2 47394603 . T . . LowGQX END=47394790 GT ./. chr2 47397839 . T . . LowGQX END=47397939 GT ./. chr2 47399526 . T . . LowGQX END=47399626 GT ./. chr2 47403565 . C . . LowGQX END=47403665 GT ./. chr2 47537651 . C . . LowGQX END=47537999 GT ./. chr2 47596193 . A . . LowGQX END=47596404 GT ./. chr2 47596594 . C . . LowGQX END=47596949 GT ./. chr2 47600551 . G . . LowGQX END=47600761 GT ./. chr2 47600896 . T . . LowGQX END=47601239 GT ./. chr2 47602322 . A . . LowGQX END=47602490 GT ./. chr2 47604102 . G . . LowGQX END=47604268 GT ./. chr2 47604812 . G . . LowGQX END=47604963 GT ./. chr2 47606041 . T . . LowGQX END=47606245 GT ./. chr2 47606857 . A . . LowGQX END=47607160 GT ./. chr2 47612254 . T . . LowGQX END=47612401 GT ./. chr2 47613660 . A . . LowGQX END=47613804 GT ./. chr2 47630280 . T . . LowGQX END=47630593 GT ./. chr2 47635489 . G . . LowGQX END=47635746 GT ./. chr2 47637182 . T . . LowGQX END=47637563 GT ./. chr2 47639502 . C . . LowGQX END=47639751 GT ./. chr2 47641357 . A . . LowGQX END=47641609 GT ./. chr2 47643384 . G . . LowGQX END=47643620 GT ./. chr2 47656830 . T . . LowGQX END=47657132 GT ./. chr2 47672636 . A . . LowGQX END=47672848 GT ./. chr2 47690119 . T . . LowGQX END=47690345 GT ./. chr2 47691392 . C . . LowGQX END=47691492 GT ./. chr2 47693746 . A . . LowGQX END=47693999 GT ./. chr2 47698053 . T . . LowGQX END=47698253 GT ./. chr2 47702113 . G . . LowGQX END=47702461 GT ./. chr2 47703455 . G . . LowGQX END=47703762 GT ./. chr2 47705360 . A . . LowGQX END=47705710 GT ./. chr2 47707784 . T . . LowGQX END=47708062 GT ./. chr2 47709867 . C . . LowGQX END=47710140 GT ./. chr2 47739441 . G . . LowGQX END=47739574 GT ./. chr2 47748044 . G . . LowGQX END=47748950 GT ./. chr2 47797067 . A . . LowGQX END=47797477 GT ./. chr2 47888081 . T . . LowGQX END=47888254 GT ./. chr2 47905355 . C . . LowGQX END=47905455 GT ./. chr2 48010322 . G . . LowGQX END=48010684 GT ./. chr2 48016527 . G . . LowGQX END=48016627 GT ./. chr2 48018015 . A . . LowGQX END=48018304 GT ./. chr2 48022982 . C . . LowGQX END=48023254 GT ./. chr2 48025699 . T . . LowGQX END=48028362 GT ./. chr2 48030508 . T . . LowGQX END=48030876 GT ./. chr2 48031998 . A . . LowGQX END=48032218 GT ./. chr2 48032706 . G . . LowGQX END=48032898 GT ./. chr2 48033292 . T . . LowGQX END=48033842 GT ./. chr2 48033867 . T . . LowGQX END=48034051 GT ./. chr2 48035255 . A . . LowGQX END=48035389 GT ./. chr2 48035466 . A . . LowGQX END=48035569 GT ./. chr2 48036295 . A . . LowGQX END=48036408 GT ./. chr2 48036737 . A . . LowGQX END=48036849 GT ./. chr2 48037453 . A . . LowGQX END=48037568 GT ./. chr2 48040287 . T . . LowGQX END=48040519 GT ./. chr2 48040919 . A . . LowGQX END=48041019 GT ./. chr2 48045910 . A . . LowGQX END=48046010 GT ./. chr2 48046093 . A . . LowGQX END=48046220 GT ./. chr2 48047499 . A . . LowGQX END=48047599 GT ./. chr2 48049295 . T . . LowGQX END=48049450 GT ./. chr2 48050280 . A . . LowGQX END=48050502 GT ./. chr2 48059486 . A . . LowGQX END=48059628 GT ./. chr2 48059709 . A . . LowGQX END=48059820 GT ./. chr2 48059906 . A . . LowGQX END=48060022 GT ./. chr2 48060101 . A . . LowGQX END=48060212 GT ./. chr2 48061716 . A . . LowGQX END=48061853 GT ./. chr2 48061919 . A . . LowGQX END=48062019 GT ./. chr2 48062969 . A . . LowGQX END=48063143 GT ./. chr2 48064041 . T . . LowGQX END=48064201 GT ./. chr2 48065996 . A . . LowGQX END=48066145 GT ./. chr2 48066549 . A . . LowGQX END=48066649 GT ./. chr2 48066779 . A . . LowGQX END=48066909 GT ./. chr2 48132556 . C . . LowGQX END=48132926 GT ./. chr2 48573352 . A . . LowGQX END=48573893 GT ./. chr2 48586184 . A . . LowGQX END=48586289 GT ./. chr2 48589765 . T . . LowGQX END=48589865 GT ./. chr2 48600356 . T . . LowGQX END=48600569 GT ./. chr2 48602057 . A . . LowGQX END=48602585 GT ./. chr2 48668012 . C . . LowGQX END=48668231 GT ./. chr2 48678132 . T . . LowGQX END=48678232 GT ./. chr2 48681663 . A . . LowGQX END=48681883 GT ./. chr2 48685103 . T . . LowGQX END=48685203 GT ./. chr2 48685263 . A . . LowGQX END=48685369 GT ./. chr2 48686891 . A . . LowGQX END=48687060 GT ./. chr2 48687214 . C . . LowGQX END=48687314 GT ./. chr2 48688215 . T . . LowGQX END=48688375 GT ./. chr2 48691993 . A . . LowGQX END=48692204 GT ./. chr2 48692630 . A . . LowGQX END=48692784 GT ./. chr2 48698224 . A . . LowGQX END=48698330 GT ./. chr2 48698414 . C . . LowGQX END=48698514 GT ./. chr2 48701820 . A . . LowGQX END=48701961 GT ./. chr2 48706610 . C . . LowGQX END=48706710 GT ./. chr2 48707060 . T . . LowGQX END=48707160 GT ./. chr2 48713768 . A . . LowGQX END=48713900 GT ./. chr2 48718134 . T . . LowGQX END=48718312 GT ./. chr2 48722816 . A . . LowGQX END=48722944 GT ./. chr2 48725630 . A . . LowGQX END=48725877 GT ./. chr2 48732669 . T . . LowGQX END=48732769 GT ./. chr2 48734406 . A . . LowGQX END=48734576 GT ./. chr2 48737152 . A . . LowGQX END=48737255 GT ./. chr2 48738477 . A . . LowGQX END=48738610 GT ./. chr2 48741762 . A . . LowGQX END=48741919 GT ./. chr2 48756606 . A . . LowGQX END=48756766 GT ./. chr2 48757007 . C . . LowGQX END=48757364 GT ./. chr2 48807771 . A . . LowGQX END=48809705 GT ./. chr2 48818790 . A . . LowGQX END=48818997 GT ./. chr2 48822295 . A . . LowGQX END=48822455 GT ./. chr2 48829130 . G . . LowGQX END=48829230 GT ./. chr2 48844974 . G . . LowGQX END=48845074 GT ./. chr2 48847988 . A . . LowGQX END=48848094 GT ./. chr2 48848304 . A . . LowGQX END=48848457 GT ./. chr2 48869519 . A . . LowGQX END=48869619 GT ./. chr2 48872165 . T . . LowGQX END=48872265 GT ./. chr2 48873590 . A . . LowGQX END=48874184 GT ./. chr2 48896859 . A . . LowGQX END=48897124 GT ./. chr2 48898725 . T . . LowGQX END=48898825 GT ./. chr2 48906472 . A . . LowGQX END=48906632 GT ./. chr2 48914785 . T . . LowGQX END=48916040 GT ./. chr2 48921312 . G . . LowGQX END=48921495 GT ./. chr2 48925703 . C . . LowGQX END=48925991 GT ./. chr2 48936036 . T . . LowGQX END=48936213 GT ./. chr2 48941074 . G . . LowGQX END=48941245 GT ./. chr2 48948824 . T . . LowGQX END=48948924 GT ./. chr2 48950544 . G . . LowGQX END=48950887 GT ./. chr2 48952764 . T . . LowGQX END=48952941 GT ./. chr2 48956241 . C . . LowGQX END=48956418 GT ./. chr2 48958315 . A . . LowGQX END=48958489 GT ./. chr2 48959999 . A . . LowGQX END=48960099 GT ./. chr2 48982599 . G . . LowGQX END=48982862 GT ./. chr2 49003387 . G . . LowGQX END=49003487 GT ./. chr2 49189821 . A . . LowGQX END=49191157 GT ./. chr2 49195786 . A . . LowGQX END=49196074 GT ./. chr2 49210000 . T . . LowGQX END=49210177 GT ./. chr2 49210186 . T . . LowGQX END=49210357 GT ./. chr2 49216065 . C . . LowGQX END=49216245 GT ./. chr2 49217654 . C . . LowGQX END=49217828 GT ./. chr2 49241996 . C . . LowGQX END=49242096 GT ./. chr2 49244577 . G . . LowGQX END=49244754 GT ./. chr2 49247174 . A . . LowGQX END=49247351 GT ./. chr2 49295307 . C . . LowGQX END=49295481 GT ./. chr2 49381354 . C . . LowGQX END=49381608 GT ./. chr2 49510124 . C . . LowGQX END=49510224 GT ./. chr2 50149031 . C . . LowGQX END=50149441 GT ./. chr2 50170791 . C . . LowGQX END=50170981 GT ./. chr2 50201106 . C . . LowGQX END=50201342 GT ./. chr2 50246344 . C . . LowGQX END=50246444 GT ./. chr2 50280358 . T . . LowGQX END=50280780 GT ./. chr2 50282068 . T . . LowGQX END=50282222 GT ./. chr2 50318410 . T . . LowGQX END=50318684 GT ./. chr2 50463876 . A . . LowGQX END=50464160 GT ./. chr2 50539841 . A . . LowGQX END=50539941 GT ./. chr2 50573778 . A . . LowGQX END=50574139 GT ./. chr2 50574245 . C . . LowGQX END=50574399 GT ./. chr2 50692579 . C . . LowGQX END=50692700 GT ./. chr2 50693562 . G . . LowGQX END=50693662 GT ./. chr2 50699435 . C . . LowGQX END=50699610 GT ./. chr2 50723042 . C . . LowGQX END=50723234 GT ./. chr2 50724470 . C . . LowGQX END=50724853 GT ./. chr2 50733632 . C . . LowGQX END=50733756 GT ./. chr2 50755686 . C . . LowGQX END=50755846 GT ./. chr2 50758364 . C . . LowGQX END=50758569 GT ./. chr2 50765390 . C . . LowGQX END=50765775 GT ./. chr2 50779724 . C . . LowGQX END=50780164 GT ./. chr2 50847159 . C . . LowGQX END=50847322 GT ./. chr2 50848335 . A . . LowGQX END=50848435 GT ./. chr2 50850451 . C . . LowGQX END=50850756 GT ./. chr2 50858170 . T . . LowGQX END=50858326 GT ./. chr2 50883459 . A . . LowGQX END=50883559 GT ./. chr2 50966355 . A . . LowGQX END=50966455 GT ./. chr2 51125688 . A . . LowGQX END=51125788 GT ./. chr2 51147092 . T . . LowGQX END=51147192 GT ./. chr2 51148963 . A . . LowGQX END=51149063 GT ./. chr2 51149719 . T . . LowGQX END=51149876 GT ./. chr2 51150498 . C . . LowGQX END=51150598 GT ./. chr2 51150609 . A . . LowGQX END=51150709 GT ./. chr2 51153055 . A . . LowGQX END=51153155 GT ./. chr2 51191067 . G . . LowGQX END=51191167 GT ./. chr2 51206361 . A . . LowGQX END=51206461 GT ./. chr2 51253488 . T . . LowGQX END=51253648 GT ./. chr2 51254639 . C . . LowGQX END=51255412 GT ./. chr2 53831962 . A . . LowGQX END=53832062 GT ./. chr2 53897628 . A . . LowGQX END=53897830 GT ./. chr2 53921019 . A . . LowGQX END=53921154 GT ./. chr2 53927406 . A . . LowGQX END=53927672 GT ./. chr2 53941519 . A . . LowGQX END=53941721 GT ./. chr2 53943701 . A . . LowGQX END=53943883 GT ./. chr2 53955847 . A . . LowGQX END=53955987 GT ./. chr2 53956593 . A . . LowGQX END=53956710 GT ./. chr2 53977918 . A . . LowGQX END=53978081 GT ./. chr2 53992512 . A . . LowGQX END=53992723 GT ./. chr2 53995022 . A . . LowGQX END=53995161 GT ./. chr2 53998952 . T . . LowGQX END=53999112 GT ./. chr2 54001277 . A . . LowGQX END=54001665 GT ./. chr2 54014346 . G . . LowGQX END=54014512 GT ./. chr2 54021480 . A . . LowGQX END=54021640 GT ./. chr2 54023008 . A . . LowGQX END=54023161 GT ./. chr2 54024641 . A . . LowGQX END=54024741 GT ./. chr2 54024851 . T . . LowGQX END=54024951 GT ./. chr2 54026152 . T . . LowGQX END=54026252 GT ./. chr2 54028532 . A . . LowGQX END=54028760 GT ./. chr2 54028848 . A . . LowGQX END=54028982 GT ./. chr2 54035434 . A . . LowGQX END=54035624 GT ./. chr2 54036279 . A . . LowGQX END=54036431 GT ./. chr2 54040084 . A . . LowGQX END=54040254 GT ./. chr2 54041669 . C . . LowGQX END=54041769 GT ./. chr2 54041925 . A . . LowGQX END=54042085 GT ./. chr2 54045021 . T . . LowGQX END=54045121 GT ./. chr2 54080269 . C . . LowGQX END=54081896 GT ./. chr2 54086964 . C . . LowGQX END=54087066 GT ./. chr2 54093224 . T . . LowGQX END=54093363 GT ./. chr2 54093882 . A . . LowGQX END=54094020 GT ./. chr2 54096501 . C . . LowGQX END=54096678 GT ./. chr2 54101474 . A . . LowGQX END=54101664 GT ./. chr2 54102762 . A . . LowGQX END=54102895 GT ./. chr2 54112820 . A . . LowGQX END=54112920 GT ./. chr2 54114394 . A . . LowGQX END=54114607 GT ./. chr2 54114993 . A . . LowGQX END=54115129 GT ./. chr2 54115854 . T . . LowGQX END=54115954 GT ./. chr2 54117189 . T . . LowGQX END=54117348 GT ./. chr2 54119943 . A . . LowGQX END=54120100 GT ./. chr2 54120739 . T . . LowGQX END=54120939 GT ./. chr2 54122129 . A . . LowGQX END=54122229 GT ./. chr2 54122718 . A . . LowGQX END=54122876 GT ./. chr2 54123932 . A . . LowGQX END=54124032 GT ./. chr2 54125005 . A . . LowGQX END=54125139 GT ./. chr2 54125415 . T . . LowGQX END=54125515 GT ./. chr2 54127016 . A . . LowGQX END=54127157 GT ./. chr2 54128485 . A . . LowGQX END=54128699 GT ./. chr2 54131160 . A . . LowGQX END=54131296 GT ./. chr2 54133733 . A . . LowGQX END=54133833 GT ./. chr2 54133925 . A . . LowGQX END=54134025 GT ./. chr2 54135455 . A . . LowGQX END=54135558 GT ./. chr2 54135625 . A . . LowGQX END=54135725 GT ./. chr2 54135900 . T . . LowGQX END=54136000 GT ./. chr2 54137130 . T . . LowGQX END=54137290 GT ./. chr2 54144355 . T . . LowGQX END=54144455 GT ./. chr2 54146226 . A . . LowGQX END=54146386 GT ./. chr2 54147328 . A . . LowGQX END=54147490 GT ./. chr2 54147974 . T . . LowGQX END=54148304 GT ./. chr2 54149582 . A . . LowGQX END=54149738 GT ./. chr2 54150171 . G . . LowGQX END=54150271 GT ./. chr2 54150456 . A . . LowGQX END=54150559 GT ./. chr2 54152674 . A . . LowGQX END=54152829 GT ./. chr2 54153079 . G . . LowGQX END=54153179 GT ./. chr2 54154526 . C . . LowGQX END=54154626 GT ./. chr2 54155252 . A . . LowGQX END=54155443 GT ./. chr2 54158970 . A . . LowGQX END=54159240 GT ./. chr2 54159802 . C . . LowGQX END=54159902 GT ./. chr2 54161740 . A . . LowGQX END=54161867 GT ./. chr2 54163212 . A . . LowGQX END=54163312 GT ./. chr2 54163883 . G . . LowGQX END=54163983 GT ./. chr2 54164526 . A . . LowGQX END=54164716 GT ./. chr2 54167066 . G . . LowGQX END=54167166 GT ./. chr2 54175556 . A . . LowGQX END=54175677 GT ./. chr2 54176278 . A . . LowGQX END=54176421 GT ./. chr2 54197609 . G . . LowGQX END=54197989 GT ./. chr2 54342711 . T . . LowGQX END=54342896 GT ./. chr2 54362498 . T . . LowGQX END=54362649 GT ./. chr2 54365774 . A . . LowGQX END=54365888 GT ./. chr2 54368982 . T . . LowGQX END=54369082 GT ./. chr2 54482054 . G . . LowGQX END=54483291 GT ./. chr2 54494397 . T . . LowGQX END=54494497 GT ./. chr2 54531823 . A . . LowGQX END=54531942 GT ./. chr2 54557275 . A . . LowGQX END=54557375 GT ./. chr2 54558076 . C . . LowGQX END=54558176 GT ./. chr2 54561953 . G . . LowGQX END=54562162 GT ./. chr2 54570856 . G . . LowGQX END=54571011 GT ./. chr2 54586095 . G . . LowGQX END=54586265 GT ./. chr2 54587339 . G . . LowGQX END=54587700 GT ./. chr2 54608982 . G . . LowGQX END=54609111 GT ./. chr2 54753554 . A . . LowGQX END=54753706 GT ./. chr2 54756483 . A . . LowGQX END=54756876 GT ./. chr2 54785914 . T . . LowGQX END=54786027 GT ./. chr2 54826227 . A . . LowGQX END=54826383 GT ./. chr2 54839296 . A . . LowGQX END=54839474 GT ./. chr2 54843340 . T . . LowGQX END=54843440 GT ./. chr2 54844736 . C . . LowGQX END=54844836 GT ./. chr2 54845213 . A . . LowGQX END=54845333 GT ./. chr2 54848535 . A . . LowGQX END=54848652 GT ./. chr2 54849435 . A . . LowGQX END=54849627 GT ./. chr2 54850564 . T . . LowGQX END=54850736 GT ./. chr2 54851918 . T . . LowGQX END=54852102 GT ./. chr2 54853067 . A . . LowGQX END=54853374 GT ./. chr2 54855232 . A . . LowGQX END=54855390 GT ./. chr2 54856068 . A . . LowGQX END=54856943 GT ./. chr2 54857027 . A . . LowGQX END=54857169 GT ./. chr2 54857990 . A . . LowGQX END=54858751 GT ./. chr2 54859701 . A . . LowGQX END=54859908 GT ./. chr2 54864846 . A . . LowGQX END=54864946 GT ./. chr2 54870118 . A . . LowGQX END=54870269 GT ./. chr2 54871458 . A . . LowGQX END=54871726 GT ./. chr2 54872364 . A . . LowGQX END=54872593 GT ./. chr2 54873060 . C . . LowGQX END=54873160 GT ./. chr2 54873329 . A . . LowGQX END=54873615 GT ./. chr2 54874266 . A . . LowGQX END=54874401 GT ./. chr2 54876121 . A . . LowGQX END=54876330 GT ./. chr2 54876750 . A . . LowGQX END=54877129 GT ./. chr2 54880724 . C . . LowGQX END=54880994 GT ./. chr2 54882205 . A . . LowGQX END=54882348 GT ./. chr2 54883044 . C . . LowGQX END=54883144 GT ./. chr2 54884971 . A . . LowGQX END=54885186 GT ./. chr2 54886289 . A . . LowGQX END=54886406 GT ./. chr2 54887071 . A . . LowGQX END=54887226 GT ./. chr2 54891588 . A . . LowGQX END=54891831 GT ./. chr2 54893050 . A . . LowGQX END=54893228 GT ./. chr2 54894713 . T . . LowGQX END=54894813 GT ./. chr2 54895486 . A . . LowGQX END=54895709 GT ./. chr2 54952188 . G . . LowGQX END=54952396 GT ./. chr2 55040368 . G . . LowGQX END=55040558 GT ./. chr2 55043923 . G . . LowGQX END=55044023 GT ./. chr2 55047515 . T . . LowGQX END=55047615 GT ./. chr2 55054702 . G . . LowGQX END=55054889 GT ./. chr2 55056478 . G . . LowGQX END=55056615 GT ./. chr2 55071183 . G . . LowGQX END=55071386 GT ./. chr2 55074622 . G . . LowGQX END=55074761 GT ./. chr2 55077098 . G . . LowGQX END=55077356 GT ./. chr2 55080779 . G . . LowGQX END=55080993 GT ./. chr2 55086640 . T . . LowGQX END=55086839 GT ./. chr2 55090869 . G . . LowGQX END=55091027 GT ./. chr2 55093902 . G . . LowGQX END=55094022 GT ./. chr2 55096317 . G . . LowGQX END=55096505 GT ./. chr2 55098636 . G . . LowGQX END=55098743 GT ./. chr2 55106681 . C . . LowGQX END=55106781 GT ./. chr2 55118190 . G . . LowGQX END=55118292 GT ./. chr2 55119590 . G . . LowGQX END=55119794 GT ./. chr2 55122051 . G . . LowGQX END=55122164 GT ./. chr2 55122409 . G . . LowGQX END=55122538 GT ./. chr2 55126777 . G . . LowGQX END=55126920 GT ./. chr2 55130180 . G . . LowGQX END=55130334 GT ./. chr2 55130507 . G . . LowGQX END=55130640 GT ./. chr2 55138085 . T . . LowGQX END=55138185 GT ./. chr2 55143895 . G . . LowGQX END=55144073 GT ./. chr2 55155413 . C . . LowGQX END=55155652 GT ./. chr2 55155761 . G . . LowGQX END=55155889 GT ./. chr2 55176008 . C . . LowGQX END=55176108 GT ./. chr2 55177786 . G . . LowGQX END=55177917 GT ./. chr2 55179730 . G . . LowGQX END=55179830 GT ./. chr2 55181119 . G . . LowGQX END=55181294 GT ./. chr2 55184926 . G . . LowGQX END=55185136 GT ./. chr2 55186240 . G . . LowGQX END=55186399 GT ./. chr2 55187355 . G . . LowGQX END=55187471 GT ./. chr2 55189658 . G . . LowGQX END=55189848 GT ./. chr2 55191121 . G . . LowGQX END=55191295 GT ./. chr2 55191706 . G . . LowGQX END=55191870 GT ./. chr2 55194135 . G . . LowGQX END=55194240 GT ./. chr2 55195263 . G . . LowGQX END=55195418 GT ./. chr2 55195803 . G . . LowGQX END=55195905 GT ./. chr2 55197169 . C . . LowGQX END=55197269 GT ./. chr2 55200264 . G . . LowGQX END=55200364 GT ./. chr2 55200679 . T . . LowGQX END=55200779 GT ./. chr2 55200931 . A . . LowGQX END=55201031 GT ./. chr2 55201816 . G . . LowGQX END=55201916 GT ./. chr2 55209649 . A . . LowGQX END=55209792 GT ./. chr2 55214625 . A . . LowGQX END=55214837 GT ./. chr2 55237190 . A . . LowGQX END=55237290 GT ./. chr2 55252220 . A . . LowGQX END=55254624 GT ./. chr2 55255279 . A . . LowGQX END=55255379 GT ./. chr2 55276686 . G . . LowGQX END=55276786 GT ./. chr2 55276874 . C . . LowGQX END=55277439 GT ./. chr2 55402924 . A . . LowGQX END=55403125 GT ./. chr2 55404736 . A . . LowGQX END=55404920 GT ./. chr2 55407644 . A . . LowGQX END=55407851 GT ./. chr2 55408704 . A . . LowGQX END=55408904 GT ./. chr2 55433404 . A . . LowGQX END=55433564 GT ./. chr2 55435755 . T . . LowGQX END=55435855 GT ./. chr2 55436538 . A . . LowGQX END=55436655 GT ./. chr2 55436764 . A . . LowGQX END=55436970 GT ./. chr2 55439807 . A . . LowGQX END=55439987 GT ./. chr2 55444945 . A . . LowGQX END=55445137 GT ./. chr2 55449349 . T . . LowGQX END=55449550 GT ./. chr2 55459895 . C . . LowGQX END=55460060 GT ./. chr2 55460436 . T . . LowGQX END=55460605 GT ./. chr2 55461204 . C . . LowGQX END=55461392 GT ./. chr2 55461916 . T . . LowGQX END=55462150 GT ./. chr2 55462513 . A . . LowGQX END=55462765 GT ./. chr2 55463782 . T . . LowGQX END=55463959 GT ./. chr2 55464422 . A . . LowGQX END=55464567 GT ./. chr2 55467145 . A . . LowGQX END=55467314 GT ./. chr2 55470074 . A . . LowGQX END=55470219 GT ./. chr2 55470550 . A . . LowGQX END=55470807 GT ./. chr2 55471163 . A . . LowGQX END=55471372 GT ./. chr2 55473471 . A . . LowGQX END=55473600 GT ./. chr2 55476529 . A . . LowGQX END=55476673 GT ./. chr2 55479611 . A . . LowGQX END=55479792 GT ./. chr2 55481175 . A . . LowGQX END=55481340 GT ./. chr2 55481788 . A . . LowGQX END=55481964 GT ./. chr2 55489400 . G . . LowGQX END=55489566 GT ./. chr2 55490774 . A . . LowGQX END=55490997 GT ./. chr2 55518830 . T . . LowGQX END=55518930 GT ./. chr2 55522200 . T . . LowGQX END=55523195 GT ./. chr2 55523392 . A . . LowGQX END=55523662 GT ./. chr2 55526966 . A . . LowGQX END=55527066 GT ./. chr2 55528270 . T . . LowGQX END=55528428 GT ./. chr2 55529006 . A . . LowGQX END=55529211 GT ./. chr2 55530197 . A . . LowGQX END=55530297 GT ./. chr2 55535943 . A . . LowGQX END=55536162 GT ./. chr2 55536295 . T . . LowGQX END=55536395 GT ./. chr2 55539568 . A . . LowGQX END=55539718 GT ./. chr2 55543062 . A . . LowGQX END=55543253 GT ./. chr2 55544340 . A . . LowGQX END=55544488 GT ./. chr2 55544698 . A . . LowGQX END=55544980 GT ./. chr2 55545977 . A . . LowGQX END=55546143 GT ./. chr2 55549662 . A . . LowGQX END=55549831 GT ./. chr2 55555388 . T . . LowGQX END=55555574 GT ./. chr2 55559700 . A . . LowGQX END=55559832 GT ./. chr2 55561228 . A . . LowGQX END=55562303 GT ./. chr2 55563815 . A . . LowGQX END=55563995 GT ./. chr2 55566598 . A . . LowGQX END=55566787 GT ./. chr2 55570782 . A . . LowGQX END=55570931 GT ./. chr2 55571502 . A . . LowGQX END=55571653 GT ./. chr2 55573309 . A . . LowGQX END=55573472 GT ./. chr2 55576592 . A . . LowGQX END=55576745 GT ./. chr2 55582673 . G . . LowGQX END=55582890 GT ./. chr2 55589442 . A . . LowGQX END=55589622 GT ./. chr2 55591078 . G . . LowGQX END=55591178 GT ./. chr2 55599568 . G . . LowGQX END=55599668 GT ./. chr2 55601935 . A . . LowGQX END=55602035 GT ./. chr2 55615862 . A . . LowGQX END=55616025 GT ./. chr2 55645950 . A . . LowGQX END=55646055 GT ./. chr2 55646135 . A . . LowGQX END=55646235 GT ./. chr2 55746936 . G . . LowGQX END=55747055 GT ./. chr2 55747528 . T . . LowGQX END=55747628 GT ./. chr2 55749166 . A . . LowGQX END=55749321 GT ./. chr2 55750855 . A . . LowGQX END=55750961 GT ./. chr2 55756012 . A . . LowGQX END=55756131 GT ./. chr2 55761003 . G . . LowGQX END=55761103 GT ./. chr2 55762826 . A . . LowGQX END=55763035 GT ./. chr2 55764617 . A . . LowGQX END=55764724 GT ./. chr2 55765869 . G . . LowGQX END=55765969 GT ./. chr2 55771072 . A . . LowGQX END=55771252 GT ./. chr2 55771354 . A . . LowGQX END=55771508 GT ./. chr2 55772041 . A . . LowGQX END=55772147 GT ./. chr2 55776985 . T . . LowGQX END=55777205 GT ./. chr2 55785909 . A . . LowGQX END=55786107 GT ./. chr2 55791447 . A . . LowGQX END=55791636 GT ./. chr2 55791986 . C . . LowGQX END=55792180 GT ./. chr2 55795328 . A . . LowGQX END=55795502 GT ./. chr2 55800724 . A . . LowGQX END=55800914 GT ./. chr2 55804369 . A . . LowGQX END=55804522 GT ./. chr2 55805381 . A . . LowGQX END=55805481 GT ./. chr2 55806813 . A . . LowGQX END=55806920 GT ./. chr2 55808701 . A . . LowGQX END=55808837 GT ./. chr2 55812135 . A . . LowGQX END=55812306 GT ./. chr2 55813752 . A . . LowGQX END=55813873 GT ./. chr2 55816004 . T . . LowGQX END=55816104 GT ./. chr2 55825550 . A . . LowGQX END=55826178 GT ./. chr2 55831112 . A . . LowGQX END=55831215 GT ./. chr2 55842505 . G . . LowGQX END=55842665 GT ./. chr2 55844278 . A . . LowGQX END=55844424 GT ./. chr2 55863370 . A . . LowGQX END=55863530 GT ./. chr2 55864661 . A . . LowGQX END=55864761 GT ./. chr2 55867700 . A . . LowGQX END=55867852 GT ./. chr2 55870271 . A . . LowGQX END=55870371 GT ./. chr2 55870452 . A . . LowGQX END=55870563 GT ./. chr2 55871764 . A . . LowGQX END=55871864 GT ./. chr2 55872476 . T . . LowGQX END=55872576 GT ./. chr2 55873376 . T . . LowGQX END=55873476 GT ./. chr2 55873536 . G . . LowGQX END=55873636 GT ./. chr2 55874478 . T . . LowGQX END=55874591 GT ./. chr2 55882012 . G . . LowGQX END=55882112 GT ./. chr2 55883261 . C . . LowGQX END=55883361 GT ./. chr2 55883424 . A . . LowGQX END=55883524 GT ./. chr2 55887210 . G . . LowGQX END=55887361 GT ./. chr2 55889019 . T . . LowGQX END=55889177 GT ./. chr2 55894124 . A . . LowGQX END=55894283 GT ./. chr2 55894934 . A . . LowGQX END=55895155 GT ./. chr2 55898433 . A . . LowGQX END=55898533 GT ./. chr2 55899106 . A . . LowGQX END=55899206 GT ./. chr2 55900026 . A . . LowGQX END=55900217 GT ./. chr2 55906755 . G . . LowGQX END=55906933 GT ./. chr2 55907821 . T . . LowGQX END=55907921 GT ./. chr2 55907963 . A . . LowGQX END=55908063 GT ./. chr2 55910895 . C . . LowGQX END=55910995 GT ./. chr2 55912076 . A . . LowGQX END=55912186 GT ./. chr2 55913493 . G . . LowGQX END=55913593 GT ./. chr2 55914761 . A . . LowGQX END=55914861 GT ./. chr2 55920796 . A . . LowGQX END=55920961 GT ./. chr2 56094157 . A . . LowGQX END=56094421 GT ./. chr2 56097804 . C . . LowGQX END=56098310 GT ./. chr2 56102030 . C . . LowGQX END=56102252 GT ./. chr2 56103707 . A . . LowGQX END=56103929 GT ./. chr2 56104830 . T . . LowGQX END=56105052 GT ./. chr2 56108696 . A . . LowGQX END=56108921 GT ./. chr2 56144749 . G . . LowGQX END=56145238 GT ./. chr2 56145303 . A . . LowGQX END=56145454 GT ./. chr2 56149444 . G . . LowGQX END=56149627 GT ./. chr2 56210052 . G . . LowGQX END=56210212 GT ./. chr2 56216085 . T . . LowGQX END=56216195 GT ./. chr2 56227780 . G . . LowGQX END=56227940 GT ./. chr2 56411759 . C . . LowGQX END=56412036 GT ./. chr2 56419611 . G . . LowGQX END=56420576 GT ./. chr2 56569992 . A . . LowGQX END=56570092 GT ./. chr2 56599478 . G . . LowGQX END=56599614 GT ./. chr2 56602900 . A . . LowGQX END=56603071 GT ./. chr2 56611396 . T . . LowGQX END=56611496 GT ./. chr2 58275668 . C . . LowGQX END=58275768 GT ./. chr2 58275962 . A . . LowGQX END=58276105 GT ./. chr2 58285458 . C . . LowGQX END=58285558 GT ./. chr2 58311199 . C . . LowGQX END=58311299 GT ./. chr2 58311944 . C . . LowGQX END=58312101 GT ./. chr2 58313411 . G . . LowGQX END=58313564 GT ./. chr2 58315474 . A . . LowGQX END=58315634 GT ./. chr2 58316763 . C . . LowGQX END=58316914 GT ./. chr2 58350203 . G . . LowGQX END=58350414 GT ./. chr2 58358941 . A . . LowGQX END=58359131 GT ./. chr2 58362256 . A . . LowGQX END=58362356 GT ./. chr2 58366799 . A . . LowGQX END=58366970 GT ./. chr2 58373449 . A . . LowGQX END=58373612 GT ./. chr2 58374256 . C . . LowGQX END=58374356 GT ./. chr2 58381847 . C . . LowGQX END=58381947 GT ./. chr2 58386482 . A . . LowGQX END=58386831 GT ./. chr2 58386849 . T . . LowGQX END=58386987 GT ./. chr2 58387192 . A . . LowGQX END=58387366 GT ./. chr2 58388606 . T . . LowGQX END=58388825 GT ./. chr2 58389950 . A . . LowGQX END=58390261 GT ./. chr2 58390518 . G . . LowGQX END=58390704 GT ./. chr2 58392808 . A . . LowGQX END=58393061 GT ./. chr2 58421337 . C . . LowGQX END=58421437 GT ./. chr2 58425713 . C . . LowGQX END=58425849 GT ./. chr2 58431214 . C . . LowGQX END=58431413 GT ./. chr2 58449026 . T . . LowGQX END=58449229 GT ./. chr2 58453812 . A . . LowGQX END=58453971 GT ./. chr2 58456898 . T . . LowGQX END=58457061 GT ./. chr2 58459138 . C . . LowGQX END=58459299 GT ./. chr2 58468302 . G . . LowGQX END=58468500 GT ./. chr2 60679699 . T . . LowGQX END=60679804 GT ./. chr2 60687537 . C . . LowGQX END=60687848 GT ./. chr2 60687849 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 60687850 . G T 7.78 LowGQX;LowGQ DP=1;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;MQ=60;MQ0=0;QD=7.78;SB=-0.01;TI=NM_018014,NM_138559,NM_022893;GI=BCL11A,BCL11A,BCL11A;FC=Missense_P733T,Silent,Missense_P733T;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,1:1:3.01:37,3,0:60:3:1.000 chr2 60687851 . C . . LowGQX END=60687886;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 60687887 . C . . LowGQX END=60687952;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:6:60 chr2 60687953 . G . . LowGQX END=60687990;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:3:60 chr2 60687991 . A . 36.01 LowGQX DP=4;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:3:4:6.02:60:6 chr2 60687992 . G . . LowGQX END=60688043;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 60688044 . T . . LowGQX . GT ./. chr2 60688045 . G . . LowGQX END=60688094;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 60688095 . T . . LowGQX . GT ./. chr2 60688096 . T . . LowGQX END=60688120;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 60688121 . G . . LowGQX END=60688187 GT ./. chr2 60688188 . T . . LowGQX END=60688421;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:58 chr2 60688422 . G . . LowGQX END=60689562 GT ./. chr2 60695804 . A . . LowGQX END=60696025 GT ./. chr2 60768989 . A . . LowGQX END=60769089 GT ./. chr2 60773104 . A . . LowGQX END=60773438 GT ./. chr2 60780278 . C . . LowGQX END=60780545 GT ./. chr2 60983513 . G . . LowGQX END=60983673 GT ./. chr2 60987237 . T . . LowGQX END=60987433 GT ./. chr2 60988804 . C . . LowGQX END=60988960 GT ./. chr2 60995596 . T . . LowGQX END=60995696 GT ./. chr2 60995914 . A . . LowGQX END=60996028 GT ./. chr2 60997570 . A . . LowGQX END=60997670 GT ./. chr2 60998652 . A . . LowGQX END=60998812 GT ./. chr2 61002097 . G . . LowGQX END=61002264 GT ./. chr2 61006770 . A . . LowGQX END=61006913 GT ./. chr2 61007829 . T . . LowGQX END=61007929 GT ./. chr2 61009018 . A . . LowGQX END=61009143 GT ./. chr2 61009759 . G . . LowGQX END=61009914 GT ./. chr2 61010268 . G . . LowGQX END=61010368 GT ./. chr2 61014080 . A . . LowGQX END=61014204 GT ./. chr2 61014644 . A . . LowGQX END=61014804 GT ./. chr2 61018894 . A . . LowGQX END=61019020 GT ./. chr2 61019262 . A . . LowGQX END=61019452 GT ./. chr2 61020757 . A . . LowGQX END=61020857 GT ./. chr2 61021104 . A . . LowGQX END=61021329 GT ./. chr2 61021828 . C . . LowGQX END=61021928 GT ./. chr2 61022078 . T . . LowGQX END=61022178 GT ./. chr2 61022399 . T . . LowGQX END=61022499 GT ./. chr2 61024195 . A . . LowGQX END=61024298 GT ./. chr2 61108871 . G . . LowGQX END=61109031 GT ./. chr2 61118816 . A . . LowGQX END=61118963 GT ./. chr2 61121530 . A . . LowGQX END=61121683 GT ./. chr2 61128065 . T . . LowGQX END=61128223 GT ./. chr2 61144010 . A . . LowGQX END=61144155 GT ./. chr2 61145324 . A . . LowGQX END=61145433 GT ./. chr2 61145527 . A . . LowGQX END=61145744 GT ./. chr2 61147161 . T . . LowGQX END=61147261 GT ./. chr2 61147516 . A . . LowGQX END=61147794 GT ./. chr2 61148896 . A . . LowGQX END=61149673 GT ./. chr2 61169500 . A . . LowGQX END=61169600 GT ./. chr2 61172142 . A . . LowGQX END=61172246 GT ./. chr2 61175176 . A . . LowGQX END=61175323 GT ./. chr2 61180130 . A . . LowGQX END=61180252 GT ./. chr2 61181046 . T . . LowGQX END=61181146 GT ./. chr2 61181206 . A . . LowGQX END=61181306 GT ./. chr2 61182132 . G . . LowGQX END=61182232 GT ./. chr2 61187525 . A . . LowGQX END=61187695 GT ./. chr2 61188591 . A . . LowGQX END=61188691 GT ./. chr2 61189884 . G . . LowGQX END=61190099 GT ./. chr2 61192166 . G . . LowGQX END=61192266 GT ./. chr2 61192486 . A . . LowGQX END=61192639 GT ./. chr2 61194585 . G . . LowGQX END=61194751 GT ./. chr2 61198626 . G . . LowGQX END=61198726 GT ./. chr2 61233630 . A . . LowGQX END=61233786 GT ./. chr2 61235894 . A . . LowGQX END=61236153 GT ./. chr2 61237942 . T . . LowGQX END=61238042 GT ./. chr2 61238898 . A . . LowGQX END=61239028 GT ./. chr2 61244844 . C . . LowGQX END=61245038 GT ./. chr2 61245296 . G . . LowGQX END=61245397 GT ./. chr2 61258503 . T . . LowGQX END=61259300 GT ./. chr2 61272810 . T . . LowGQX END=61273038 GT ./. chr2 61275556 . T . . LowGQX END=61275957 GT ./. chr2 61297484 . A . . LowGQX END=61297674 GT ./. chr2 61298739 . A . . LowGQX END=61298939 GT ./. chr2 61300590 . A . . LowGQX END=61300690 GT ./. chr2 61304053 . A . . LowGQX END=61304296 GT ./. chr2 61308515 . G . . LowGQX END=61308667 GT ./. chr2 61310287 . A . . LowGQX END=61310452 GT ./. chr2 61315288 . T . . LowGQX END=61315388 GT ./. chr2 61315491 . A . . LowGQX END=61315656 GT ./. chr2 61319597 . A . . LowGQX END=61319725 GT ./. chr2 61324833 . A . . LowGQX END=61324990 GT ./. chr2 61330986 . A . . LowGQX END=61331136 GT ./. chr2 61333646 . A . . LowGQX END=61333800 GT ./. chr2 61335419 . C . . LowGQX END=61335519 GT ./. chr2 61336330 . A . . LowGQX END=61336434 GT ./. chr2 61343110 . T . . LowGQX END=61343210 GT ./. chr2 61344457 . C . . LowGQX END=61344557 GT ./. chr2 61344589 . A . . LowGQX END=61344689 GT ./. chr2 61345158 . T . . LowGQX END=61345258 GT ./. chr2 61348316 . G . . LowGQX END=61348416 GT ./. chr2 61349229 . T . . LowGQX END=61349329 GT ./. chr2 61361270 . A . . LowGQX END=61361370 GT ./. chr2 61385013 . A . . LowGQX END=61385148 GT ./. chr2 61386354 . A . . LowGQX END=61386514 GT ./. chr2 61389628 . G . . LowGQX END=61389745 GT ./. chr2 61389976 . G . . LowGQX END=61390091 GT ./. chr2 61390186 . G . . LowGQX END=61390368 GT ./. chr2 61391488 . G . . LowGQX END=61391663 GT ./. chr2 61404612 . C . . LowGQX END=61404765 GT ./. chr2 61406104 . G . . LowGQX END=61406315 GT ./. chr2 61408450 . T . . LowGQX END=61408550 GT ./. chr2 61410686 . A . . LowGQX END=61410798 GT ./. chr2 61411842 . T . . LowGQX END=61411942 GT ./. chr2 61412635 . A . . LowGQX END=61412756 GT ./. chr2 61412937 . G . . LowGQX END=61413037 GT ./. chr2 61413557 . G . . LowGQX END=61413657 GT ./. chr2 61413750 . A . . LowGQX END=61413924 GT ./. chr2 61415235 . T . . LowGQX END=61415847 GT ./. chr2 61416043 . A . . LowGQX END=61416207 GT ./. chr2 61417404 . A . . LowGQX END=61417552 GT ./. chr2 61417651 . A . . LowGQX END=61417796 GT ./. chr2 61420026 . T . . LowGQX END=61420126 GT ./. chr2 61430273 . A . . LowGQX END=61430401 GT ./. chr2 61431389 . A . . LowGQX END=61431518 GT ./. chr2 61431630 . A . . LowGQX END=61431739 GT ./. chr2 61433150 . A . . LowGQX END=61433262 GT ./. chr2 61433893 . A . . LowGQX END=61434024 GT ./. chr2 61436024 . G . . LowGQX END=61436124 GT ./. chr2 61438905 . A . . LowGQX END=61439095 GT ./. chr2 61441192 . C . . LowGQX END=61441832 GT ./. chr2 61447443 . A . . LowGQX END=61447595 GT ./. chr2 61448635 . A . . LowGQX END=61448744 GT ./. chr2 61449727 . A . . LowGQX END=61449827 GT ./. chr2 61450193 . A . . LowGQX END=61450302 GT ./. chr2 61450358 . T . . LowGQX END=61450458 GT ./. chr2 61454198 . T . . LowGQX END=61454398 GT ./. chr2 61455768 . A . . LowGQX END=61455868 GT ./. chr2 61455960 . A . . LowGQX END=61456133 GT ./. chr2 61456676 . T . . LowGQX END=61456776 GT ./. chr2 61459525 . A . . LowGQX END=61459678 GT ./. chr2 61462963 . T . . LowGQX END=61463063 GT ./. chr2 61463135 . A . . LowGQX END=61463235 GT ./. chr2 61463284 . T . . LowGQX END=61463384 GT ./. chr2 61463443 . A . . LowGQX END=61463543 GT ./. chr2 61468693 . A . . LowGQX END=61468704;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 61468705 . T . . LowGQX END=61468793 GT ./. chr2 61468878 . T . . LowGQX END=61469029 GT ./. chr2 61472335 . T . . LowGQX END=61472435 GT ./. chr2 61473457 . A . . LowGQX END=61473615 GT ./. chr2 61475644 . A . . LowGQX END=61475821 GT ./. chr2 61483457 . C . . LowGQX END=61483617 GT ./. chr2 61483997 . T . . LowGQX END=61484097 GT ./. chr2 61484166 . A . . LowGQX END=61484266 GT ./. chr2 61484337 . A . . LowGQX END=61484488 GT ./. chr2 61486829 . A . . LowGQX END=61486929 GT ./. chr2 61492500 . A . . LowGQX END=61492695 GT ./. chr2 61493117 . A . . LowGQX END=61493305 GT ./. chr2 61505298 . A . . LowGQX END=61505423 GT ./. chr2 61505441 . A . . LowGQX END=61505601 GT ./. chr2 61507322 . T . . LowGQX END=61507486 GT ./. chr2 61508223 . A . . LowGQX END=61508380 GT ./. chr2 61510278 . A . . LowGQX END=61510407 GT ./. chr2 61510515 . A . . LowGQX END=61510615 GT ./. chr2 61512002 . A . . LowGQX END=61512102 GT ./. chr2 61515810 . A . . LowGQX END=61516015 GT ./. chr2 61520593 . A . . LowGQX END=61520693 GT ./. chr2 61522022 . C . . LowGQX END=61522176 GT ./. chr2 61522301 . A . . LowGQX END=61522428 GT ./. chr2 61523933 . A . . LowGQX END=61524063 GT ./. chr2 61528084 . A . . LowGQX END=61528298 GT ./. chr2 61528487 . A . . LowGQX END=61528592 GT ./. chr2 61538673 . A . . LowGQX END=61538825 GT ./. chr2 61538917 . A . . LowGQX END=61539048 GT ./. chr2 61541718 . A . . LowGQX END=61541882 GT ./. chr2 61542008 . A . . LowGQX END=61542112 GT ./. chr2 61544787 . A . . LowGQX END=61544905 GT ./. chr2 61546276 . A . . LowGQX END=61546465 GT ./. chr2 61552442 . G . . LowGQX END=61552658 GT ./. chr2 61558349 . A . . LowGQX END=61558509 GT ./. chr2 61561012 . C . . LowGQX END=61561112 GT ./. chr2 61566484 . A . . LowGQX END=61566616 GT ./. chr2 61566699 . A . . LowGQX END=61566819 GT ./. chr2 61570948 . A . . LowGQX END=61571167 GT ./. chr2 61575003 . A . . LowGQX END=61575618 GT ./. chr2 61575889 . A . . LowGQX END=61576024 GT ./. chr2 61576353 . A . . LowGQX END=61576453 GT ./. chr2 61577393 . A . . LowGQX END=61577527 GT ./. chr2 61577701 . A . . LowGQX END=61577831 GT ./. chr2 61597453 . T . . LowGQX END=61597553 GT ./. chr2 61597624 . T . . LowGQX END=61597724 GT ./. chr2 61605426 . A . . LowGQX END=61605579 GT ./. chr2 61607302 . A . . LowGQX END=61607499 GT ./. chr2 61610332 . A . . LowGQX END=61610488 GT ./. chr2 61621986 . A . . LowGQX END=61622140 GT ./. chr2 61622294 . A . . LowGQX END=61622446 GT ./. chr2 61632841 . A . . LowGQX END=61633266 GT ./. chr2 61647875 . G . . LowGQX END=61647975 GT ./. chr2 61697697 . C . . LowGQX END=61697857 GT ./. chr2 61705953 . T . . LowGQX END=61706104 GT ./. chr2 61708318 . A . . LowGQX END=61708419 GT ./. chr2 61709513 . A . . LowGQX END=61709677 GT ./. chr2 61710040 . G . . LowGQX END=61710229 GT ./. chr2 61711050 . T . . LowGQX END=61711243 GT ./. chr2 61712901 . A . . LowGQX END=61713100 GT ./. chr2 61715298 . A . . LowGQX END=61715409 GT ./. chr2 61715721 . A . . LowGQX END=61715909 GT ./. chr2 61717735 . T . . LowGQX END=61717914 GT ./. chr2 61719168 . A . . LowGQX END=61719287 GT ./. chr2 61719288 . T . . LowGQX END=61719297;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:53 chr2 61719298 . T . 33.01 LowGQX DP=2;MQ=53;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:53:3 chr2 61719299 . A . . LowGQX END=61719308;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:53 chr2 61719309 . A . 35.99 LowGQX DP=3;MQ=55;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:2:3:5.99:55:6 chr2 61719310 . T . . LowGQX END=61719332;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:55 chr2 61719333 . T . . LowGQX . GT ./. chr2 61719334 . C . . LowGQX END=61719335;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 61719336 . A . . LowGQX . GT ./. chr2 61719458 . A . . LowGQX END=61719461;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:43 chr2 61719462 . T . . LowGQX END=61719467 GT ./. chr2 61719468 . A . . LowGQX END=61719469;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:52 chr2 61719470 . T . . LowGQX END=61719471 GT ./. chr2 61719472 . C . 33.01 LowGQX DP=2;MQ=52;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:52:3 chr2 61719473 . G . . LowGQX END=61719480;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:52 chr2 61719481 . T . . LowGQX . GT ./. chr2 61719482 . G . . LowGQX END=61719493;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:52 chr2 61719494 . C . . LowGQX . GT ./. chr2 61719495 . T . . LowGQX END=61719503;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 61719504 . T . . LowGQX . GT ./. chr2 61719505 . T . . LowGQX END=61719513;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 61719514 . C . . LowGQX END=61719515 GT ./. chr2 61719516 . C . . LowGQX END=61719530;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 61719531 . T . . LowGQX . GT ./. chr2 61719532 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 61719533 . T . . LowGQX . GT ./. chr2 61719534 . T . . LowGQX END=61719541;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 61719542 . T . . LowGQX . GT ./. chr2 61719543 . A . . LowGQX END=61719565;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 61719566 . A . . LowGQX . GT ./. chr2 61719567 . A . . LowGQX END=61719578;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 61719579 . T . . LowGQX END=61719619 GT ./. chr2 61719700 . A . . LowGQX END=61719701;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:6:60 chr2 61719702 . C . . LowGQX . GT:DP:GQX:MQ 0/0:3:3:60 chr2 61719703 . T . . LowGQX END=61719704;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:9:58 chr2 61719705 . T . . LowGQX . GT:DP:GQX:MQ 0/0:4:3:58 chr2 61719706 . A . . LowGQX END=61719710;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:6:58 chr2 61719711 . A . . LowGQX . GT:DP:GQX:MQ 0/0:4:3:58 chr2 61719712 . G . . LowGQX END=61719713;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:6:58 chr2 61719714 . A . 35.99 LowGQX DP=4;MQ=58;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:3:4:5.99:58:6 chr2 61719715 . A . . LowGQX END=61719717;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:6:58 chr2 61719718 . A . 33.01 LowGQX DP=4;MQ=58;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:3:4:3.01:58:3 chr2 61719719 . G . . LowGQX END=61719728;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:6:58 chr2 61719729 . T . 36.01 LowGQX DP=4;MQ=58;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:2:4:6.02:58:6 chr2 61719730 . T . . LowGQX END=61719732;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:6:58 chr2 61719733 . T . 39.02 LowGQX DP=4;MQ=58;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:3:4:9.03:58:9 chr2 61719734 . C . . LowGQX END=61719735;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:9:58 chr2 61719736 . T . . LowGQX . GT:DP:GQX:MQ 0/0:4:3:58 chr2 61719737 . C . . LowGQX END=61719738;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:6:58 chr2 61719739 . T . 36.01 LowGQX DP=4;MQ=58;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:3:4:6.02:58:6 chr2 61719740 . C . . LowGQX END=61719742;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:6:57 chr2 61719743 . G A 6.43 LowGQX;LowGQ BaseQRankSum=0.804;DP=3;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=2.8909;MQ=57;MQ0=0;MQRankSum=0.804;QD=2.14;ReadPosRankSum=0.804;SB=-0.01;TI=NM_003400;GI=XPO1;FC=Missense_H509Y;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1,1:3:15.67:35,0,16:57:6:0.500 chr2 61719744 . C . . LowGQX END=61719759;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:57 chr2 61719760 . G . . LowGQX END=61719786 GT ./. chr2 61719787 . A . . LowGQX END=61719812;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:40 chr2 61719813 . A . . LowGQX END=61719951 GT ./. chr2 61720048 . A . . LowGQX END=61720191 GT ./. chr2 61721027 . A . . LowGQX END=61721229 GT ./. chr2 61722588 . A . . LowGQX END=61722751 GT ./. chr2 61724012 . A . . LowGQX END=61724145 GT ./. chr2 61725806 . A . . LowGQX END=61725930 GT ./. chr2 61725975 . T . . LowGQX END=61726075 GT ./. chr2 61726846 . G . . LowGQX END=61727046 GT ./. chr2 61729104 . A . . LowGQX END=61729204 GT ./. chr2 61729365 . C . . LowGQX END=61729465 GT ./. chr2 61749733 . T . . LowGQX END=61749833 GT ./. chr2 61753477 . C . . LowGQX END=61753659 GT ./. chr2 61760905 . A . . LowGQX END=61761035 GT ./. chr2 62051982 . A . . LowGQX END=62053786 GT ./. chr2 62054188 . A . . LowGQX END=62054445 GT ./. chr2 62063094 . A . . LowGQX END=62063296 GT ./. chr2 62063926 . C . . LowGQX END=62064026 GT ./. chr2 62065672 . C . . LowGQX END=62065841 GT ./. chr2 62066505 . A . . LowGQX END=62067768 GT ./. chr2 62069206 . A . . LowGQX END=62069496 GT ./. chr2 62074001 . T . . LowGQX END=62074161 GT ./. chr2 62080983 . C . . LowGQX END=62081283 GT ./. chr2 62095785 . C . . LowGQX END=62095885 GT ./. chr2 62096573 . A . . LowGQX END=62096691 GT ./. chr2 62099215 . A . . LowGQX END=62099454 GT ./. chr2 62099591 . A . . LowGQX END=62099726 GT ./. chr2 62100135 . A . . LowGQX END=62100250 GT ./. chr2 62100330 . A . . LowGQX END=62100431 GT ./. chr2 62103228 . A . . LowGQX END=62103372 GT ./. chr2 62104053 . A . . LowGQX END=62104190 GT ./. chr2 62104476 . A . . LowGQX END=62104652 GT ./. chr2 62106002 . A . . LowGQX END=62106149 GT ./. chr2 62107419 . A . . LowGQX END=62107579 GT ./. chr2 62110589 . C . . LowGQX END=62110742 GT ./. chr2 62112063 . A . . LowGQX END=62112232 GT ./. chr2 62115514 . A . . LowGQX END=62115645 GT ./. chr2 62132763 . C . . LowGQX END=62133045 GT ./. chr2 62142791 . A . . LowGQX END=62142891 GT ./. chr2 62196104 . A . . LowGQX END=62196218 GT ./. chr2 62227785 . T . . LowGQX END=62228169 GT ./. chr2 62282534 . G . . LowGQX END=62282634 GT ./. chr2 62362915 . G . . LowGQX END=62363128 GT ./. chr2 62448921 . T . . LowGQX END=62449021 GT ./. chr2 62449354 . A . . LowGQX END=62450552 GT ./. chr2 62728342 . G . . LowGQX END=62728625 GT ./. chr2 62729530 . T . . LowGQX END=62729688 GT ./. chr2 62729824 . A . . LowGQX END=62729932 GT ./. chr2 62733113 . A . . LowGQX END=62733267 GT ./. chr2 62738885 . G . . LowGQX END=62738985 GT ./. chr2 62901175 . C . . LowGQX END=62901275 GT ./. chr2 62934325 . T . . LowGQX END=62934433 GT ./. chr2 62974509 . A . . LowGQX END=62974609 GT ./. chr2 62991399 . A . . LowGQX END=62991499 GT ./. chr2 62998455 . T . . LowGQX END=62998555 GT ./. chr2 63053220 . A . . LowGQX END=63053408 GT ./. chr2 63058121 . T . . LowGQX END=63058332 GT ./. chr2 63085539 . A . . LowGQX END=63085648 GT ./. chr2 63086302 . A . . LowGQX END=63086429 GT ./. chr2 63091864 . A . . LowGQX END=63092109 GT ./. chr2 63101479 . A . . LowGQX END=63101670 GT ./. chr2 63169851 . A . . LowGQX END=63170034 GT ./. chr2 63170912 . C . . LowGQX END=63171012 GT ./. chr2 63175393 . A . . LowGQX END=63176300 GT ./. chr2 63182650 . A . . LowGQX END=63182798 GT ./. chr2 63206321 . A . . LowGQX END=63206473 GT ./. chr2 63215064 . A . . LowGQX END=63215224 GT ./. chr2 63217849 . A . . LowGQX END=63217978 GT ./. chr2 63220663 . A . . LowGQX END=63220806 GT ./. chr2 63221004 . A . . LowGQX END=63221115 GT ./. chr2 63223735 . T . . LowGQX END=63223956 GT ./. chr2 63264618 . T . . LowGQX END=63264772 GT ./. chr2 63265865 . G . . LowGQX END=63265965 GT ./. chr2 63272199 . A . . LowGQX END=63272318 GT ./. chr2 63272541 . C . . LowGQX END=63272641 GT ./. chr2 63280073 . T . . LowGQX END=63280225 GT ./. chr2 63281067 . T . . LowGQX END=63281336 GT ./. chr2 63282634 . A . . LowGQX END=63283454 GT ./. chr2 63349090 . G . . LowGQX END=63349243 GT ./. chr2 63379998 . C . . LowGQX END=63380132 GT ./. chr2 63380579 . C . . LowGQX END=63380761 GT ./. chr2 63401754 . G . . LowGQX END=63402019 GT ./. chr2 63456875 . T . . LowGQX END=63457035 GT ./. chr2 63486391 . A . . LowGQX END=63486596 GT ./. chr2 63540332 . C . . LowGQX END=63540498 GT ./. chr2 63596541 . C . . LowGQX END=63596641 GT ./. chr2 63605470 . C . . LowGQX END=63605696 GT ./. chr2 63608990 . C . . LowGQX END=63609281 GT ./. chr2 63631119 . T . . LowGQX END=63631844 GT ./. chr2 63660828 . T . . LowGQX END=63661122 GT ./. chr2 63664504 . C . . LowGQX END=63664740 GT ./. chr2 63664957 . A . . LowGQX END=63665057 GT ./. chr2 63666840 . T . . LowGQX END=63667057 GT ./. chr2 63711687 . G . . LowGQX END=63711849 GT ./. chr2 63712000 . T . . LowGQX END=63712173 GT ./. chr2 63713588 . A . . LowGQX END=63713772 GT ./. chr2 63714530 . G . . LowGQX END=63714680 GT ./. chr2 63719939 . A . . LowGQX END=63720126 GT ./. chr2 63798461 . G . . LowGQX END=63798561 GT ./. chr2 63798680 . T . . LowGQX END=63798780 GT ./. chr2 63815280 . T . . LowGQX END=63815457 GT ./. chr2 63816130 . C . . LowGQX END=63816230 GT ./. chr2 63816440 . T . . LowGQX END=63816540 GT ./. chr2 63820710 . G . . LowGQX END=63820810 GT ./. chr2 63821385 . T . . LowGQX END=63821485 GT ./. chr2 63821620 . A . . LowGQX END=63821723 GT ./. chr2 63822504 . G . . LowGQX END=63822656 GT ./. chr2 63824531 . A . . LowGQX END=63824711 GT ./. chr2 63826302 . A . . LowGQX END=63826429 GT ./. chr2 63831828 . A . . LowGQX END=63832009 GT ./. chr2 63832412 . A . . LowGQX END=63832530 GT ./. chr2 63833068 . T . . LowGQX END=63833168 GT ./. chr2 63833994 . A . . LowGQX END=63834124 GT ./. chr2 64069280 . A . . LowGQX END=64069380 GT ./. chr2 64069499 . G . . LowGQX END=64069599 GT ./. chr2 64069654 . T . . LowGQX END=64069754 GT ./. chr2 64082507 . G . . LowGQX END=64082607 GT ./. chr2 64082748 . T . . LowGQX END=64082908 GT ./. chr2 64083438 . A . . LowGQX END=64083570 GT ./. chr2 64083887 . A . . LowGQX END=64083987 GT ./. chr2 64084655 . T . . LowGQX END=64084755 GT ./. chr2 64084961 . A . . LowGQX END=64085073 GT ./. chr2 64089928 . T . . LowGQX END=64090028 GT ./. chr2 64109598 . A . . LowGQX END=64109788 GT ./. chr2 64111092 . A . . LowGQX END=64111282 GT ./. chr2 64112721 . A . . LowGQX END=64113023 GT ./. chr2 64113473 . A . . LowGQX END=64113675 GT ./. chr2 64114534 . A . . LowGQX END=64114781 GT ./. chr2 64117163 . C . . LowGQX END=64117322 GT ./. chr2 64118252 . A . . LowGQX END=64118364 GT ./. chr2 64120452 . C . . LowGQX END=64120552 GT ./. chr2 64120562 . C . . LowGQX END=64120672 GT ./. chr2 64124568 . C . . LowGQX END=64124728 GT ./. chr2 64126606 . A . . LowGQX END=64126718 GT ./. chr2 64139417 . C . . LowGQX END=64139570 GT ./. chr2 64139622 . A . . LowGQX END=64139842 GT ./. chr2 64140351 . C . . LowGQX END=64140451 GT ./. chr2 64141264 . A . . LowGQX END=64141424 GT ./. chr2 64144016 . G . . LowGQX END=64144116 GT ./. chr2 64147015 . A . . LowGQX END=64147132 GT ./. chr2 64147578 . A . . LowGQX END=64147764 GT ./. chr2 64148338 . A . . LowGQX END=64148472 GT ./. chr2 64160805 . A . . LowGQX END=64161150 GT ./. chr2 64169597 . A . . LowGQX END=64169757 GT ./. chr2 64171652 . G . . LowGQX END=64171812 GT ./. chr2 64174465 . A . . LowGQX END=64174627 GT ./. chr2 64176119 . C . . LowGQX END=64176300 GT ./. chr2 64189190 . A . . LowGQX END=64189580 GT ./. chr2 64192927 . C . . LowGQX END=64193103 GT ./. chr2 64195999 . A . . LowGQX END=64196159 GT ./. chr2 64199290 . A . . LowGQX END=64199390 GT ./. chr2 64202083 . C . . LowGQX END=64202183 GT ./. chr2 64208778 . A . . LowGQX END=64209024 GT ./. chr2 64210996 . A . . LowGQX END=64211136 GT ./. chr2 64321834 . T . . LowGQX END=64322405 GT ./. chr2 64323257 . A . . LowGQX END=64323450 GT ./. chr2 64323545 . A . . LowGQX END=64323747 GT ./. chr2 64327530 . A . . LowGQX END=64327690 GT ./. chr2 64331833 . A . . LowGQX END=64331967 GT ./. chr2 64335360 . T . . LowGQX END=64335460 GT ./. chr2 64681588 . A . . LowGQX END=64681748 GT ./. chr2 64682464 . A . . LowGQX END=64682564 GT ./. chr2 64682718 . T . . LowGQX END=64682818 GT ./. chr2 64683392 . C . . LowGQX END=64683602 GT ./. chr2 64685417 . A . . LowGQX END=64685565 GT ./. chr2 64778607 . C . . LowGQX END=64780546 GT ./. chr2 64794694 . A . . LowGQX END=64794850 GT ./. chr2 64796174 . G . . LowGQX END=64796355 GT ./. chr2 64796736 . T . . LowGQX END=64796836 GT ./. chr2 64800078 . A . . LowGQX END=64800205 GT ./. chr2 64806601 . T . . LowGQX END=64806701 GT ./. chr2 64808316 . A . . LowGQX END=64808416 GT ./. chr2 64812504 . C . . LowGQX END=64812682 GT ./. chr2 64819017 . A . . LowGQX END=64819172 GT ./. chr2 64863059 . T . . LowGQX END=64864008 GT ./. chr2 65131500 . C . . LowGQX END=65131755 GT ./. chr2 65132125 . C . . LowGQX END=65132270 GT ./. chr2 65159444 . C . . LowGQX END=65159544 GT ./. chr2 65200569 . C . . LowGQX END=65200669 GT ./. chr2 65216776 . C . . LowGQX END=65217307 GT ./. chr2 65228554 . A . . LowGQX END=65228654 GT ./. chr2 65231069 . T . . LowGQX END=65231169 GT ./. chr2 65237729 . A . . LowGQX END=65237900 GT ./. chr2 65243572 . A . . LowGQX END=65243810 GT ./. chr2 65245203 . A . . LowGQX END=65245402 GT ./. chr2 65245677 . A . . LowGQX END=65245816 GT ./. chr2 65248044 . A . . LowGQX END=65248283 GT ./. chr2 65296577 . C . . LowGQX END=65296938 GT ./. chr2 65298586 . A . . LowGQX END=65300280 GT ./. chr2 65301414 . A . . LowGQX END=65301671 GT ./. chr2 65305000 . A . . LowGQX END=65305101 GT ./. chr2 65309668 . A . . LowGQX END=65309842 GT ./. chr2 65315626 . T . . LowGQX END=65315825 GT ./. chr2 65316072 . C . . LowGQX END=65316205 GT ./. chr2 65318115 . A . . LowGQX END=65318215 GT ./. chr2 65325103 . A . . LowGQX END=65325203 GT ./. chr2 65331854 . C . . LowGQX END=65331954 GT ./. chr2 65331988 . G . . LowGQX END=65332088 GT ./. chr2 65332424 . A . . LowGQX END=65332584 GT ./. chr2 65333467 . C . . LowGQX END=65333567 GT ./. chr2 65341226 . C . . LowGQX END=65341326 GT ./. chr2 65356988 . G . . LowGQX END=65357088 GT ./. chr2 65454958 . G . . LowGQX END=65455172 GT ./. chr2 65466934 . T . . LowGQX END=65467099 GT ./. chr2 65469140 . T . . LowGQX END=65469240 GT ./. chr2 65469726 . A . . LowGQX END=65469826 GT ./. chr2 65473656 . A . . LowGQX END=65473876 GT ./. chr2 65478148 . T . . LowGQX END=65478248 GT ./. chr2 65480860 . A . . LowGQX END=65481001 GT ./. chr2 65482677 . A . . LowGQX END=65482831 GT ./. chr2 65488379 . A . . LowGQX END=65488529 GT ./. chr2 65492175 . A . . LowGQX END=65492379 GT ./. chr2 65495696 . A . . LowGQX END=65495871 GT ./. chr2 65540633 . A . . LowGQX END=65541306 GT ./. chr2 65543866 . A . . LowGQX END=65544020 GT ./. chr2 65559104 . G . . LowGQX END=65559204 GT ./. chr2 65561321 . A . . LowGQX END=65561421 GT ./. chr2 65561737 . A . . LowGQX END=65561910 GT ./. chr2 65571643 . A . . LowGQX END=65571743 GT ./. chr2 65571851 . A . . LowGQX END=65572033 GT ./. chr2 65593682 . A . . LowGQX END=65593782 GT ./. chr2 65604733 . G . . LowGQX END=65604833 GT ./. chr2 65659059 . G . . LowGQX END=65659159 GT ./. chr2 66662905 . G . . LowGQX END=66663065 GT ./. chr2 66664816 . C . . LowGQX END=66665096 GT ./. chr2 66666732 . A . . LowGQX END=66666832 GT ./. chr2 66666964 . T . . LowGQX END=66667127 GT ./. chr2 66667619 . A . . LowGQX END=66667779 GT ./. chr2 66668431 . A . . LowGQX END=66668651 GT ./. chr2 66670033 . G . . LowGQX END=66670213 GT ./. chr2 66688957 . A . . LowGQX END=66689057 GT ./. chr2 66691207 . C . . LowGQX END=66691366 GT ./. chr2 66736078 . A . . LowGQX END=66736256 GT ./. chr2 66739280 . G . . LowGQX END=66739470 GT ./. chr2 66775023 . A . . LowGQX END=66775183 GT ./. chr2 66794544 . T . . LowGQX END=66794738 GT ./. chr2 66795764 . C . . LowGQX END=66795950 GT ./. chr2 66796121 . G . . LowGQX END=66796241 GT ./. chr2 66798367 . A . . LowGQX END=66798667 GT ./. chr2 67624508 . T . . LowGQX END=67624868 GT ./. chr2 67626299 . A . . LowGQX END=67626432 GT ./. chr2 67626620 . G . . LowGQX END=67626771 GT ./. chr2 67629992 . A . . LowGQX END=67630109 GT ./. chr2 67630355 . A . . LowGQX END=67632470 GT ./. chr2 67637041 . A . . LowGQX END=67637221 GT ./. chr2 68269989 . T . . LowGQX END=68270188 GT ./. chr2 68273038 . T . . LowGQX END=68273198 GT ./. chr2 68273404 . A . . LowGQX END=68273560 GT ./. chr2 68274303 . A . . LowGQX END=68274452 GT ./. chr2 68280192 . C . . LowGQX END=68280301 GT ./. chr2 68352438 . A . . LowGQX END=68352538 GT ./. chr2 68358368 . A . . LowGQX END=68358580 GT ./. chr2 68361762 . A . . LowGQX END=68361991 GT ./. chr2 68364429 . A . . LowGQX END=68364568 GT ./. chr2 68365872 . A . . LowGQX END=68365992 GT ./. chr2 68368824 . A . . LowGQX END=68368930 GT ./. chr2 68371675 . A . . LowGQX END=68371850 GT ./. chr2 68374540 . T . . LowGQX END=68374702 GT ./. chr2 68384391 . A . . LowGQX END=68384827 GT ./. chr2 68384928 . C . . LowGQX END=68385276 GT ./. chr2 68385510 . A . . LowGQX END=68385664 GT ./. chr2 68388323 . T . . LowGQX END=68388423 GT ./. chr2 68388807 . T . . LowGQX END=68388907 GT ./. chr2 68389378 . G . . LowGQX END=68389478 GT ./. chr2 68389676 . A . . LowGQX END=68389798 GT ./. chr2 68400465 . T . . LowGQX END=68400565 GT ./. chr2 68401851 . T . . LowGQX END=68401951 GT ./. chr2 68408069 . T . . LowGQX END=68408169 GT ./. chr2 68413599 . C . . LowGQX END=68413799 GT ./. chr2 68414367 . C . . LowGQX END=68414467 GT ./. chr2 68415645 . C . . LowGQX END=68415823 GT ./. chr2 68444194 . G . . LowGQX END=68444294 GT ./. chr2 68479148 . A . . LowGQX END=68479308 GT ./. chr2 68480120 . C . . LowGQX END=68480270 GT ./. chr2 68483168 . G . . LowGQX END=68483268 GT ./. chr2 68488292 . A . . LowGQX END=68488392 GT ./. chr2 68511538 . T . . LowGQX END=68511638 GT ./. chr2 68520992 . T . . LowGQX END=68521161 GT ./. chr2 68544204 . C . . LowGQX END=68544442 GT ./. chr2 68546352 . A . . LowGQX END=68546535 GT ./. chr2 68592455 . T . . LowGQX END=68592555 GT ./. chr2 68607458 . A . . LowGQX END=68607618 GT ./. chr2 68607853 . A . . LowGQX END=68608039 GT ./. chr2 68609670 . G . . LowGQX END=68609770 GT ./. chr2 68613632 . A . . LowGQX END=68613821 GT ./. chr2 68615517 . A . . LowGQX END=68615626 GT ./. chr2 68620286 . G . . LowGQX END=68620386 GT ./. chr2 68621224 . T . . LowGQX END=68621324 GT ./. chr2 68622810 . A . . LowGQX END=68622951 GT ./. chr2 68691339 . C . . LowGQX END=68691505 GT ./. chr2 68691970 . A . . LowGQX END=68692280 GT ./. chr2 68694811 . G . . LowGQX END=68694962 GT ./. chr2 68717308 . T . . LowGQX END=68717408 GT ./. chr2 68729861 . A . . LowGQX END=68730061 GT ./. chr2 68740210 . A . . LowGQX END=68740362 GT ./. chr2 68740678 . A . . LowGQX END=68740817 GT ./. chr2 68753191 . A . . LowGQX END=68753377 GT ./. chr2 68762383 . T . . LowGQX END=68762483 GT ./. chr2 68765002 . A . . LowGQX END=68765362 GT ./. chr2 68772317 . A . . LowGQX END=68772447 GT ./. chr2 68794391 . G . . LowGQX END=68794547 GT ./. chr2 68804950 . A . . LowGQX END=68805157 GT ./. chr2 68805216 . T . . LowGQX END=68805316 GT ./. chr2 68872903 . C . . LowGQX END=68873490 GT ./. chr2 68881961 . T . . LowGQX END=68882760 GT ./. chr2 68962313 . C . . LowGQX END=68962413 GT ./. chr2 69002312 . C . . LowGQX END=69002555 GT ./. chr2 69002727 . G . . LowGQX END=69002827 GT ./. chr2 69009359 . T . . LowGQX END=69009459 GT ./. chr2 69014970 . A . . LowGQX END=69015091 GT ./. chr2 69034363 . A . . LowGQX END=69034615 GT ./. chr2 69040417 . A . . LowGQX END=69040554 GT ./. chr2 69043285 . G . . LowGQX END=69043508 GT ./. chr2 69045003 . A . . LowGQX END=69045129 GT ./. chr2 69046253 . A . . LowGQX END=69046650 GT ./. chr2 69049470 . A . . LowGQX END=69050007 GT ./. chr2 69053117 . A . . LowGQX END=69053329 GT ./. chr2 69053336 . G . . LowGQX END=69053436 GT ./. chr2 69092761 . T . . LowGQX END=69093706 GT ./. chr2 69098155 . A . . LowGQX END=69098493 GT ./. chr2 69172492 . T . . LowGQX END=69172592 GT ./. chr2 69173421 . C . . LowGQX END=69173595 GT ./. chr2 69174277 . A . . LowGQX END=69174392 GT ./. chr2 69177256 . A . . LowGQX END=69177398 GT ./. chr2 69177811 . A . . LowGQX END=69177911 GT ./. chr2 69179938 . A . . LowGQX END=69180038 GT ./. chr2 69201745 . G . . LowGQX END=69201845 GT ./. chr2 69204604 . A . . LowGQX END=69204704 GT ./. chr2 69204767 . A . . LowGQX END=69204909 GT ./. chr2 69206001 . A . . LowGQX END=69206116 GT ./. chr2 69207043 . A . . LowGQX END=69207195 GT ./. chr2 69207859 . A . . LowGQX END=69207959 GT ./. chr2 69240581 . G . . LowGQX END=69240835 GT ./. chr2 69267125 . T . . LowGQX END=69267299 GT ./. chr2 69271823 . G . . LowGQX END=69271997 GT ./. chr2 69297728 . G . . LowGQX END=69297912 GT ./. chr2 69298813 . C . . LowGQX END=69298971 GT ./. chr2 69300103 . T . . LowGQX END=69300285 GT ./. chr2 69302671 . G . . LowGQX END=69302842 GT ./. chr2 69304489 . A . . LowGQX END=69304672 GT ./. chr2 69317940 . C . . LowGQX END=69318103 GT ./. chr2 69329923 . G . . LowGQX END=69330169 GT ./. chr2 69350098 . A . . LowGQX END=69350270 GT ./. chr2 69351646 . T . . LowGQX END=69351827 GT ./. chr2 69362122 . A . . LowGQX END=69362222 GT ./. chr2 69372413 . C . . LowGQX END=69372513 GT ./. chr2 69379250 . A . . LowGQX END=69379448 GT ./. chr2 69397311 . G . . LowGQX END=69397473 GT ./. chr2 69399428 . T . . LowGQX END=69399528 GT ./. chr2 69408867 . C . . LowGQX END=69409065 GT ./. chr2 69409574 . G . . LowGQX END=69409844 GT ./. chr2 69420416 . A . . LowGQX END=69420599 GT ./. chr2 69472306 . C . . LowGQX END=69472669 GT ./. chr2 69553270 . T . . LowGQX END=69553417 GT ./. chr2 69553995 . G . . LowGQX END=69554259 GT ./. chr2 69555352 . C . . LowGQX END=69555622 GT ./. chr2 69556378 . T . . LowGQX END=69556608 GT ./. chr2 69556765 . A . . LowGQX END=69556982 GT ./. chr2 69564979 . T . . LowGQX END=69565239 GT ./. chr2 69565526 . T . . LowGQX END=69565749 GT ./. chr2 69569233 . T . . LowGQX END=69569433 GT ./. chr2 69572985 . C . . LowGQX END=69573183 GT ./. chr2 69575252 . T . . LowGQX END=69575518 GT ./. chr2 69577159 . A . . LowGQX END=69577367 GT ./. chr2 69581388 . C . . LowGQX END=69581488 GT ./. chr2 69581570 . G . . LowGQX END=69581752 GT ./. chr2 69583577 . T . . LowGQX END=69583741 GT ./. chr2 69585410 . T . . LowGQX END=69585647 GT ./. chr2 69586349 . T . . LowGQX END=69586510 GT ./. chr2 69590626 . C . . LowGQX END=69590854 GT ./. chr2 69597082 . G . . LowGQX END=69597292 GT ./. chr2 69601087 . A . . LowGQX END=69601297 GT ./. chr2 69614086 . A . . LowGQX END=69614270 GT ./. chr2 69623244 . A . . LowGQX END=69623474 GT ./. chr2 69626452 . T . . LowGQX END=69626552 GT ./. chr2 69627433 . T . . LowGQX END=69627722 GT ./. chr2 69633103 . T . . LowGQX END=69633266 GT ./. chr2 69642266 . A . . LowGQX END=69642483 GT ./. chr2 69646619 . G . . LowGQX END=69646788 GT ./. chr2 69650663 . C . . LowGQX END=69650901 GT ./. chr2 69657028 . G . . LowGQX END=69657188 GT ./. chr2 69658983 . A . . LowGQX END=69659189 GT ./. chr2 69664442 . C . . LowGQX END=69664761 GT ./. chr2 69688708 . C . . LowGQX END=69688868 GT ./. chr2 69692556 . C . . LowGQX END=69693625 GT ./. chr2 69702998 . C . . LowGQX END=69703098 GT ./. chr2 69704011 . C . . LowGQX END=69704123 GT ./. chr2 69706012 . A . . LowGQX END=69706194 GT ./. chr2 69707991 . C . . LowGQX END=69708094 GT ./. chr2 69709717 . A . . LowGQX END=69709945 GT ./. chr2 69723115 . A . . LowGQX END=69723215 GT ./. chr2 69732700 . C . . LowGQX END=69732806 GT ./. chr2 69734552 . C . . LowGQX END=69734711 GT ./. chr2 69736362 . C . . LowGQX END=69736596 GT ./. chr2 69741602 . C . . LowGQX END=69741882 GT ./. chr2 69746085 . C . . LowGQX END=69746373 GT ./. chr2 69747965 . C . . LowGQX END=69748174 GT ./. chr2 69752155 . C . . LowGQX END=69752255 GT ./. chr2 69754347 . C . . LowGQX END=69754452 GT ./. chr2 69757139 . C . . LowGQX END=69757273 GT ./. chr2 69757748 . G . . LowGQX END=69757848 GT ./. chr2 69759172 . C . . LowGQX END=69759295 GT ./. chr2 69769654 . C . . LowGQX END=69769798 GT ./. chr2 69771527 . C . . LowGQX END=69771677 GT ./. chr2 69783991 . C . . LowGQX END=69784111 GT ./. chr2 69869979 . T . . LowGQX END=69870173 GT ./. chr2 70008653 . A . . LowGQX END=70008753 GT ./. chr2 70015180 . G . . LowGQX END=70015280 GT ./. chr2 70031663 . A . . LowGQX END=70031763 GT ./. chr2 70033515 . A . . LowGQX END=70033633 GT ./. chr2 70035034 . T . . LowGQX END=70035134 GT ./. chr2 70037716 . C . . LowGQX END=70037816 GT ./. chr2 70039764 . A . . LowGQX END=70039864 GT ./. chr2 70043230 . C . . LowGQX END=70043330 GT ./. chr2 70045729 . A . . LowGQX END=70045829 GT ./. chr2 70046392 . T . . LowGQX END=70046492 GT ./. chr2 70047829 . A . . LowGQX END=70047956 GT ./. chr2 70052516 . G . . LowGQX END=70052668 GT ./. chr2 70057023 . C . . LowGQX END=70057287 GT ./. chr2 70064677 . A . . LowGQX END=70064847 GT ./. chr2 70066587 . A . . LowGQX END=70066688 GT ./. chr2 70068072 . A . . LowGQX END=70068174 GT ./. chr2 70070279 . A . . LowGQX END=70070396 GT ./. chr2 70071246 . A . . LowGQX END=70071346 GT ./. chr2 70074613 . C . . LowGQX END=70074768 GT ./. chr2 70076780 . T . . LowGQX END=70076880 GT ./. chr2 70081953 . A . . LowGQX END=70082133 GT ./. chr2 70088395 . A . . LowGQX END=70088495 GT ./. chr2 70092020 . G . . LowGQX END=70092120 GT ./. chr2 70096849 . A . . LowGQX END=70096999 GT ./. chr2 70098871 . T . . LowGQX END=70099025 GT ./. chr2 70105979 . C . . LowGQX END=70106139 GT ./. chr2 70121024 . C . . LowGQX END=70121184 GT ./. chr2 70122224 . A . . LowGQX END=70122349 GT ./. chr2 70123565 . T . . LowGQX END=70123683 GT ./. chr2 70124499 . T . . LowGQX END=70124599 GT ./. chr2 70130296 . T . . LowGQX END=70130396 GT ./. chr2 70131384 . A . . LowGQX END=70131554 GT ./. chr2 70142390 . A . . LowGQX END=70142550 GT ./. chr2 70143201 . G . . LowGQX END=70143355 GT ./. chr2 70148833 . A . . LowGQX END=70148933 GT ./. chr2 70162481 . A . . LowGQX END=70162600 GT ./. chr2 70164115 . G . . LowGQX END=70164215 GT ./. chr2 70164365 . A . . LowGQX END=70164529 GT ./. chr2 70165227 . A . . LowGQX END=70165419 GT ./. chr2 70187787 . T . . LowGQX END=70188823 GT ./. chr2 70190352 . C . . LowGQX END=70190633 GT ./. chr2 70191363 . C . . LowGQX END=70191560 GT ./. chr2 70215873 . C . . LowGQX END=70215973 GT ./. chr2 70223797 . T . . LowGQX END=70223897 GT ./. chr2 70314874 . C . . LowGQX END=70315949 GT ./. chr2 70377486 . C . . LowGQX END=70377699 GT ./. chr2 70387755 . A . . LowGQX END=70387922 GT ./. chr2 70392222 . A . . LowGQX END=70392327 GT ./. chr2 70392658 . A . . LowGQX END=70392770 GT ./. chr2 70396687 . A . . LowGQX END=70396796 GT ./. chr2 70402803 . A . . LowGQX END=70402912 GT ./. chr2 70406662 . A . . LowGQX END=70406777 GT ./. chr2 70408293 . A . . LowGQX END=70409120 GT ./. chr2 70439849 . A . . LowGQX END=70439980 GT ./. chr2 70441479 . A . . LowGQX END=70441629 GT ./. chr2 70442451 . A . . LowGQX END=70442629 GT ./. chr2 70443278 . T . . LowGQX END=70443433 GT ./. chr2 70443534 . A . . LowGQX END=70443634 GT ./. chr2 70443865 . C . . LowGQX END=70444129 GT ./. chr2 70451647 . C . . LowGQX END=70451764 GT ./. chr2 70452459 . C . . LowGQX END=70452559 GT ./. chr2 70454861 . A . . LowGQX END=70454961 GT ./. chr2 70455476 . C . . LowGQX END=70455595 GT ./. chr2 70456158 . G . . LowGQX END=70456258 GT ./. chr2 70456346 . C . . LowGQX END=70456453 GT ./. chr2 70457886 . A . . LowGQX END=70457989 GT ./. chr2 70463209 . A . . LowGQX END=70463310 GT ./. chr2 70475535 . A . . LowGQX END=70475677 GT ./. chr2 70485243 . A . . LowGQX END=70485411 GT ./. chr2 70486490 . A . . LowGQX END=70486701 GT ./. chr2 70488342 . A . . LowGQX END=70488521 GT ./. chr2 70502089 . A . . LowGQX END=70502305 GT ./. chr2 70502644 . A . . LowGQX END=70502801 GT ./. chr2 70503864 . A . . LowGQX END=70504527 GT ./. chr2 70508742 . G . . LowGQX END=70508842 GT ./. chr2 70514396 . C . . LowGQX END=70514504 GT ./. chr2 70515198 . A . . LowGQX END=70515327 GT ./. chr2 70516444 . A . . LowGQX END=70516544 GT ./. chr2 70520239 . G . . LowGQX END=70520339 GT ./. chr2 70520716 . T . . LowGQX END=70520816 GT ./. chr2 70524419 . T . . LowGQX END=70524612 GT ./. chr2 70527970 . A . . LowGQX END=70528115 GT ./. chr2 70528539 . C . . LowGQX END=70529146 GT ./. chr2 70676696 . A . . LowGQX END=70676796 GT ./. chr2 70677945 . A . . LowGQX END=70678045 GT ./. chr2 70678836 . T . . LowGQX END=70678936 GT ./. chr2 70680348 . A . . LowGQX END=70680462 GT ./. chr2 70683469 . A . . LowGQX END=70683623 GT ./. chr2 70692746 . A . . LowGQX END=70692871 GT ./. chr2 70741908 . G . . LowGQX END=70742068 GT ./. chr2 70780295 . G . . LowGQX END=70780395 GT ./. chr2 70780770 . C . . LowGQX END=70780930 GT ./. chr2 70890555 . A . . LowGQX END=70890870 GT ./. chr2 70900008 . A . . LowGQX END=70900141 GT ./. chr2 70900371 . A . . LowGQX END=70900480 GT ./. chr2 70901808 . A . . LowGQX END=70901960 GT ./. chr2 70903840 . C . . LowGQX END=70904020 GT ./. chr2 70904888 . A . . LowGQX END=70905012 GT ./. chr2 70905834 . A . . LowGQX END=70906096 GT ./. chr2 70910721 . A . . LowGQX END=70910902 GT ./. chr2 70915154 . A . . LowGQX END=70915257 GT ./. chr2 70917916 . A . . LowGQX END=70918064 GT ./. chr2 70919533 . A . . LowGQX END=70919687 GT ./. chr2 70922841 . G . . LowGQX END=70922941 GT ./. chr2 70923375 . A . . LowGQX END=70923531 GT ./. chr2 70931451 . A . . LowGQX END=70931594 GT ./. chr2 70933356 . A . . LowGQX END=70933575 GT ./. chr2 70994975 . G . . LowGQX END=70995075 GT ./. chr2 71004437 . T . . LowGQX END=71004537 GT ./. chr2 71004696 . G . . LowGQX END=71004804 GT ./. chr2 71012546 . C . . LowGQX END=71012772 GT ./. chr2 71014770 . T . . LowGQX END=71014934 GT ./. chr2 71017539 . C . . LowGQX END=71017771 GT ./. chr2 71036202 . T . . LowGQX END=71036384 GT ./. chr2 71036401 . T . . LowGQX END=71036517 GT ./. chr2 71036869 . A . . LowGQX END=71036992 GT ./. chr2 71039577 . A . . LowGQX END=71039733 GT ./. chr2 71043124 . A . . LowGQX END=71044247 GT ./. chr2 71046482 . C . . LowGQX END=71046582 GT ./. chr2 71046905 . A . . LowGQX END=71047026 GT ./. chr2 71047576 . G . . LowGQX END=71047676 GT ./. chr2 71058180 . G . . LowGQX END=71058332 GT ./. chr2 71058831 . C . . LowGQX END=71058951 GT ./. chr2 71060030 . C . . LowGQX END=71060183 GT ./. chr2 71060776 . C . . LowGQX END=71061152 GT ./. chr2 71062590 . C . . LowGQX END=71062790 GT ./. chr2 71062833 . G . . LowGQX END=71062940 GT ./. chr2 71127750 . G . . LowGQX END=71128001 GT ./. chr2 71148226 . A . . LowGQX END=71148418 GT ./. chr2 71159895 . A . . LowGQX END=71160337 GT ./. chr2 71163034 . C . . LowGQX END=71163254 GT ./. chr2 71170619 . A . . LowGQX END=71170895 GT ./. chr2 71171286 . G . . LowGQX END=71171386 GT ./. chr2 71185125 . G . . LowGQX END=71185326 GT ./. chr2 71185412 . C . . LowGQX END=71185608 GT ./. chr2 71186097 . G . . LowGQX END=71186277 GT ./. chr2 71187018 . C . . LowGQX END=71187260 GT ./. chr2 71188000 . A . . LowGQX END=71188215 GT ./. chr2 71188675 . T . . LowGQX END=71188876 GT ./. chr2 71189856 . G . . LowGQX END=71190082 GT ./. chr2 71190241 . A . . LowGQX END=71190494 GT ./. chr2 71190651 . G . . LowGQX END=71190836 GT ./. chr2 71191517 . G . . LowGQX END=71191724 GT ./. chr2 71191815 . G . . LowGQX END=71192303 GT ./. chr2 71205774 . C . . LowGQX END=71205948 GT ./. chr2 71206225 . A . . LowGQX END=71206476 GT ./. chr2 71206789 . A . . LowGQX END=71206993 GT ./. chr2 71209064 . A . . LowGQX END=71209233 GT ./. chr2 71209705 . A . . LowGQX END=71209830 GT ./. chr2 71211251 . A . . LowGQX END=71211421 GT ./. chr2 71211739 . A . . LowGQX END=71212437 GT ./. chr2 71215728 . G . . LowGQX END=71215848 GT ./. chr2 71216043 . A . . LowGQX END=71216150 GT ./. chr2 71216863 . G . . LowGQX END=71216963 GT ./. chr2 71218937 . T . . LowGQX END=71219116 GT ./. chr2 71220816 . T . . LowGQX END=71220916 GT ./. chr2 71221743 . C . . LowGQX END=71221903 GT ./. chr2 71295654 . C . . LowGQX END=71295865 GT ./. chr2 71297625 . T . . LowGQX END=71297725 GT ./. chr2 71297869 . A . . LowGQX END=71297972 GT ./. chr2 71298814 . A . . LowGQX END=71298960 GT ./. chr2 71299769 . A . . LowGQX END=71299884 GT ./. chr2 71299912 . C . . LowGQX END=71300012 GT ./. chr2 71300610 . A . . LowGQX END=71300727 GT ./. chr2 71302679 . T . . LowGQX END=71302779 GT ./. chr2 71303732 . A . . LowGQX END=71303834 GT ./. chr2 71304678 . C . . LowGQX END=71304778 GT ./. chr2 71305436 . T . . LowGQX END=71305641 GT ./. chr2 71337049 . T . . LowGQX END=71337304 GT ./. chr2 71351285 . A . . LowGQX END=71351725 GT ./. chr2 71357259 . G . . LowGQX END=71357401 GT ./. chr2 71357791 . C . . LowGQX END=71357891 GT ./. chr2 71360026 . A . . LowGQX END=71360709 GT ./. chr2 71361076 . A . . LowGQX END=71361238 GT ./. chr2 71361734 . T . . LowGQX END=71361930 GT ./. chr2 71365618 . A . . LowGQX END=71365911 GT ./. chr2 71366909 . G . . LowGQX END=71367009 GT ./. chr2 71368360 . A . . LowGQX END=71368502 GT ./. chr2 71371556 . A . . LowGQX END=71371671 GT ./. chr2 71375127 . A . . LowGQX END=71375239 GT ./. chr2 71376351 . A . . LowGQX END=71376586 GT ./. chr2 71376994 . A . . LowGQX END=71377148 GT ./. chr2 71415587 . T . . LowGQX END=71415687 GT ./. chr2 71416974 . C . . LowGQX END=71417152 GT ./. chr2 71429581 . C . . LowGQX END=71429720 GT ./. chr2 71503717 . G . . LowGQX END=71503885 GT ./. chr2 71575882 . G . . LowGQX END=71577404 GT ./. chr2 71582777 . T . . LowGQX END=71582930 GT ./. chr2 71590201 . T . . LowGQX END=71590353 GT ./. chr2 71591082 . A . . LowGQX END=71591385 GT ./. chr2 71592557 . A . . LowGQX END=71592839 GT ./. chr2 71595510 . A . . LowGQX END=71595690 GT ./. chr2 71597011 . A . . LowGQX END=71597181 GT ./. chr2 71607332 . A . . LowGQX END=71607432 GT ./. chr2 71607620 . A . . LowGQX END=71607720 GT ./. chr2 71615527 . G . . LowGQX END=71615627 GT ./. chr2 71615752 . G . . LowGQX END=71615854 GT ./. chr2 71620523 . G . . LowGQX END=71620776 GT ./. chr2 71622340 . A . . LowGQX END=71622440 GT ./. chr2 71623189 . A . . LowGQX END=71623347 GT ./. chr2 71625759 . T . . LowGQX END=71625917 GT ./. chr2 71626683 . T . . LowGQX END=71626783 GT ./. chr2 71627227 . G . . LowGQX END=71627327 GT ./. chr2 71627579 . C . . LowGQX END=71627679 GT ./. chr2 71629084 . A . . LowGQX END=71629274 GT ./. chr2 71630998 . A . . LowGQX END=71631131 GT ./. chr2 71632649 . T . . LowGQX END=71632802 GT ./. chr2 71633256 . A . . LowGQX END=71633395 GT ./. chr2 71635250 . A . . LowGQX END=71635380 GT ./. chr2 71635819 . T . . LowGQX END=71635919 GT ./. chr2 71645701 . A . . LowGQX END=71645801 GT ./. chr2 71649942 . A . . LowGQX END=71651171 GT ./. chr2 71651763 . C . . LowGQX END=71651863 GT ./. chr2 71653588 . A . . LowGQX END=71654547 GT ./. chr2 71655675 . A . . LowGQX END=71655784 GT ./. chr2 71658455 . A . . LowGQX END=71658615 GT ./. chr2 71660293 . A . . LowGQX END=71660416 GT ./. chr2 71661795 . A . . LowGQX END=71661955 GT ./. chr2 71681078 . T . . LowGQX END=71681268 GT ./. chr2 71693972 . C . . LowGQX END=71694078 GT ./. chr2 71707962 . A . . LowGQX END=71708120 GT ./. chr2 71708958 . T . . LowGQX END=71709152 GT ./. chr2 71730293 . G . . LowGQX END=71730501 GT ./. chr2 71738886 . G . . LowGQX END=71739103 GT ./. chr2 71740296 . G . . LowGQX END=71740463 GT ./. chr2 71740795 . C . . LowGQX END=71741103 GT ./. chr2 71742702 . G . . LowGQX END=71742933 GT ./. chr2 71743259 . C . . LowGQX END=71743424 GT ./. chr2 71744068 . G . . LowGQX END=71744221 GT ./. chr2 71747243 . C . . LowGQX END=71747390 GT ./. chr2 71747868 . A . . LowGQX END=71748086 GT ./. chr2 71753299 . A . . LowGQX END=71753528 GT ./. chr2 71755377 . T . . LowGQX END=71755583 GT ./. chr2 71762100 . C . . LowGQX END=71762271 GT ./. chr2 71762347 . T . . LowGQX END=71762493 GT ./. chr2 71766236 . G . . LowGQX END=71766421 GT ./. chr2 71776429 . T . . LowGQX END=71776573 GT ./. chr2 71778120 . T . . LowGQX END=71778338 GT ./. chr2 71778686 . C . . LowGQX END=71778902 GT ./. chr2 71780090 . G . . LowGQX END=71780370 GT ./. chr2 71780886 . C . . LowGQX END=71781113 GT ./. chr2 71783044 . C . . LowGQX END=71783253 GT ./. chr2 71788831 . T . . LowGQX END=71789126 GT ./. chr2 71791137 . C . . LowGQX END=71791395 GT ./. chr2 71795030 . C . . LowGQX END=71795520 GT ./. chr2 71796899 . G . . LowGQX END=71797116 GT ./. chr2 71797308 . T . . LowGQX END=71797516 GT ./. chr2 71797678 . A . . LowGQX END=71797923 GT ./. chr2 71801277 . C . . LowGQX END=71801553 GT ./. chr2 71816672 . C . . LowGQX END=71816868 GT ./. chr2 71817290 . T . . LowGQX END=71817470 GT ./. chr2 71825643 . T . . LowGQX END=71825927 GT ./. chr2 71827781 . T . . LowGQX END=71828024 GT ./. chr2 71828548 . A . . LowGQX END=71828710 GT ./. chr2 71829851 . T . . LowGQX END=71829987 GT ./. chr2 71838324 . C . . LowGQX END=71838528 GT ./. chr2 71838544 . T . . LowGQX END=71838808 GT ./. chr2 71839720 . A . . LowGQX END=71839988 GT ./. chr2 71840413 . G . . LowGQX END=71840592 GT ./. chr2 71847618 . C . . LowGQX END=71847740 GT ./. chr2 71871044 . T . . LowGQX END=71871245 GT ./. chr2 71883241 . T . . LowGQX END=71883472 GT ./. chr2 71885957 . C . . LowGQX END=71886215 GT ./. chr2 71887639 . A . . LowGQX END=71887833 GT ./. chr2 71891347 . T . . LowGQX END=71891620 GT ./. chr2 71892241 . C . . LowGQX END=71892486 GT ./. chr2 71894455 . A . . LowGQX END=71894697 GT ./. chr2 71895833 . A . . LowGQX END=71896024 GT ./. chr2 71896191 . C . . LowGQX END=71896389 GT ./. chr2 71896684 . C . . LowGQX END=71896928 GT ./. chr2 71901276 . T . . LowGQX END=71901478 GT ./. chr2 71906136 . G . . LowGQX END=71906417 GT ./. chr2 71908080 . C . . LowGQX END=71908292 GT ./. chr2 71909609 . A . . LowGQX END=71909859 GT ./. chr2 71913501 . G . . LowGQX END=71913674 GT ./. chr2 72359305 . C . . LowGQX END=72359800 GT ./. chr2 72360101 . C . . LowGQX END=72360488 GT ./. chr2 72361839 . A . . LowGQX END=72362097 GT ./. chr2 72362222 . G . . LowGQX END=72362600 GT ./. chr2 72371067 . G . . LowGQX END=72371496 GT ./. chr2 72374709 . G . . LowGQX END=72375015 GT ./. chr2 72406463 . T . . LowGQX END=72406632 GT ./. chr2 72411203 . C . . LowGQX END=72411317 GT ./. chr2 72562063 . C . . LowGQX END=72562163 GT ./. chr2 72606857 . C . . LowGQX END=72607000 GT ./. chr2 72692222 . T . . LowGQX END=72692469 GT ./. chr2 72707744 . C . . LowGQX END=72707880 GT ./. chr2 72719446 . C . . LowGQX END=72719559 GT ./. chr2 72722558 . C . . LowGQX END=72722718 GT ./. chr2 72723582 . C . . LowGQX END=72723742 GT ./. chr2 72725582 . C . . LowGQX END=72725682 GT ./. chr2 72727016 . C . . LowGQX END=72727116 GT ./. chr2 72740260 . C . . LowGQX END=72740382 GT ./. chr2 72741736 . T . . LowGQX END=72741836 GT ./. chr2 72742164 . A . . LowGQX END=72742264 GT ./. chr2 72786566 . C . . LowGQX END=72786666 GT ./. chr2 72802600 . C . . LowGQX END=72802798 GT ./. chr2 72945231 . C . . LowGQX END=72945437 GT ./. chr2 72958109 . A . . LowGQX END=72958209 GT ./. chr2 72958279 . C . . LowGQX END=72958379 GT ./. chr2 72960119 . A . . LowGQX END=72960274 GT ./. chr2 72968432 . C . . LowGQX END=72968599 GT ./. chr2 73052926 . C . . LowGQX END=73053040 GT ./. chr2 73114511 . C . . LowGQX END=73114917 GT ./. chr2 73115392 . A . . LowGQX END=73115785 GT ./. chr2 73118425 . T . . LowGQX END=73118718 GT ./. chr2 73143812 . G . . LowGQX END=73144190 GT ./. chr2 73144969 . C . . LowGQX END=73145504 GT ./. chr2 73151317 . A . . LowGQX END=73151625 GT ./. chr2 73152568 . G . . LowGQX END=73152671 GT ./. chr2 73160914 . A . . LowGQX END=73161086 GT ./. chr2 73172140 . G . . LowGQX END=73172240 GT ./. chr2 73184109 . C . . LowGQX END=73184233 GT ./. chr2 73188217 . G . . LowGQX END=73188428 GT ./. chr2 73195570 . A . . LowGQX END=73195670 GT ./. chr2 73198697 . A . . LowGQX END=73198817 GT ./. chr2 73215383 . T . . LowGQX END=73215483 GT ./. chr2 73226061 . G . . LowGQX END=73226161 GT ./. chr2 73227539 . G . . LowGQX END=73227639 GT ./. chr2 73228631 . C . . LowGQX END=73228731 GT ./. chr2 73247331 . T . . LowGQX END=73247431 GT ./. chr2 73249629 . C . . LowGQX END=73249729 GT ./. chr2 73250281 . A . . LowGQX END=73250381 GT ./. chr2 73267972 . C . . LowGQX END=73268072 GT ./. chr2 73268714 . G . . LowGQX END=73268814 GT ./. chr2 73285642 . A . . LowGQX END=73285742 GT ./. chr2 73298731 . A . . LowGQX END=73298837 GT ./. chr2 73302333 . C . . LowGQX END=73302855 GT ./. chr2 73303119 . A . . LowGQX END=73303313 GT ./. chr2 73315176 . A . . LowGQX END=73315880 GT ./. chr2 73316005 . A . . LowGQX END=73316641 GT ./. chr2 73339473 . A . . LowGQX END=73339908 GT ./. chr2 73429794 . C . . LowGQX END=73430177 GT ./. chr2 73435527 . G . . LowGQX END=73435743 GT ./. chr2 73437898 . G . . LowGQX END=73438058 GT ./. chr2 73441393 . A . . LowGQX END=73441493 GT ./. chr2 73441821 . A . . LowGQX END=73441921 GT ./. chr2 73445987 . A . . LowGQX END=73446100 GT ./. chr2 73447049 . A . . LowGQX END=73447149 GT ./. chr2 73447177 . A . . LowGQX END=73447321 GT ./. chr2 73447787 . A . . LowGQX END=73447913 GT ./. chr2 73448278 . T . . LowGQX END=73448378 GT ./. chr2 73448952 . A . . LowGQX END=73449061 GT ./. chr2 73449865 . C . . LowGQX END=73449965 GT ./. chr2 73450150 . T . . LowGQX END=73450250 GT ./. chr2 73450552 . A . . LowGQX END=73450663 GT ./. chr2 73451054 . G . . LowGQX END=73451154 GT ./. chr2 73451992 . A . . LowGQX END=73452092 GT ./. chr2 73452745 . T . . LowGQX END=73452845 GT ./. chr2 73452922 . A . . LowGQX END=73453077 GT ./. chr2 73455580 . T . . LowGQX END=73455705 GT ./. chr2 73455921 . A . . LowGQX END=73456111 GT ./. chr2 73456587 . A . . LowGQX END=73456701 GT ./. chr2 73457239 . A . . LowGQX END=73457344 GT ./. chr2 73460146 . G . . LowGQX END=73460306 GT ./. chr2 73461460 . T . . LowGQX END=73461560 GT ./. chr2 73466770 . G . . LowGQX END=73466925 GT ./. chr2 73467564 . G . . LowGQX END=73467672 GT ./. chr2 73470071 . A . . LowGQX END=73470258 GT ./. chr2 73471101 . T . . LowGQX END=73471201 GT ./. chr2 73471671 . G . . LowGQX END=73471844 GT ./. chr2 73474888 . A . . LowGQX END=73475057 GT ./. chr2 73476117 . A . . LowGQX END=73476310 GT ./. chr2 73476945 . A . . LowGQX END=73477047 GT ./. chr2 73477432 . A . . LowGQX END=73477569 GT ./. chr2 73478352 . A . . LowGQX END=73478563 GT ./. chr2 73479766 . A . . LowGQX END=73479992 GT ./. chr2 73486091 . C . . LowGQX END=73486191 GT ./. chr2 73486308 . C . . LowGQX END=73486425 GT ./. chr2 73487516 . C . . LowGQX END=73487676 GT ./. chr2 73487867 . C . . LowGQX END=73487987 GT ./. chr2 73490279 . T . . LowGQX END=73490439 GT ./. chr2 73490805 . C . . LowGQX END=73490959 GT ./. chr2 73491014 . T . . LowGQX END=73491182 GT ./. chr2 73491405 . C . . LowGQX END=73491648 GT ./. chr2 73492409 . C . . LowGQX END=73492769 GT ./. chr2 73493008 . G . . LowGQX END=73493108 GT ./. chr2 73493584 . C . . LowGQX END=73493811 GT ./. chr2 73495853 . C . . LowGQX END=73496851 GT ./. chr2 73497947 . T . . LowGQX END=73498047 GT ./. chr2 73513180 . A . . LowGQX END=73513513 GT ./. chr2 73518583 . G . . LowGQX END=73519912 GT ./. chr2 73520308 . A . . LowGQX END=73520763 GT ./. chr2 73612946 . C . . LowGQX END=73613372 GT ./. chr2 73635699 . A . . LowGQX END=73635927 GT ./. chr2 73646200 . T . . LowGQX END=73646498 GT ./. chr2 73649934 . A . . LowGQX END=73650154 GT ./. chr2 73651507 . T . . LowGQX END=73652082 GT ./. chr2 73653530 . A . . LowGQX END=73653733 GT ./. chr2 73659275 . G . . LowGQX END=73659471 GT ./. chr2 73675039 . A . . LowGQX END=73681246 GT ./. chr2 73682238 . C . . LowGQX END=73682474 GT ./. chr2 73689820 . T . . LowGQX END=73689980 GT ./. chr2 73716710 . A . . LowGQX END=73718677 GT ./. chr2 73746851 . C . . LowGQX END=73747195 GT ./. chr2 73761900 . T . . LowGQX END=73762128 GT ./. chr2 73777343 . C . . LowGQX END=73777616 GT ./. chr2 73784296 . T . . LowGQX END=73784533 GT ./. chr2 73786048 . T . . LowGQX END=73786321 GT ./. chr2 73799338 . C . . LowGQX END=73800618 GT ./. chr2 73826477 . C . . LowGQX END=73826700 GT ./. chr2 73827754 . C . . LowGQX END=73828060 GT ./. chr2 73828271 . G . . LowGQX END=73828615 GT ./. chr2 73829261 . A . . LowGQX END=73829547 GT ./. chr2 73830317 . C . . LowGQX END=73830484 GT ./. chr2 73835551 . C . . LowGQX END=73835753 GT ./. chr2 73836637 . A . . LowGQX END=73836791 GT ./. chr2 73868070 . G . . LowGQX END=73868758 GT ./. chr2 73899962 . A . . LowGQX END=73900178 GT ./. chr2 73900940 . G . . LowGQX END=73901124 GT ./. chr2 73901951 . C . . LowGQX END=73902051 GT ./. chr2 73912088 . G . . LowGQX END=73912218 GT ./. chr2 73927748 . A . . LowGQX END=73928433 GT ./. chr2 73957064 . G . . LowGQX END=73957218 GT ./. chr2 73957665 . C . . LowGQX END=73957866 GT ./. chr2 73959288 . A . . LowGQX END=73959415 GT ./. chr2 73959659 . G . . LowGQX END=73959828 GT ./. chr2 73961554 . A . . LowGQX END=73961699 GT ./. chr2 73989786 . T . . LowGQX END=73989989 GT ./. chr2 73993543 . A . . LowGQX END=73993724 GT ./. chr2 73993943 . C . . LowGQX END=73994043 GT ./. chr2 73994206 . T . . LowGQX END=73994362 GT ./. chr2 73995881 . A . . LowGQX END=73996080 GT ./. chr2 73996373 . T . . LowGQX END=73996473 GT ./. chr2 74000564 . T . . LowGQX END=74000664 GT ./. chr2 74000925 . A . . LowGQX END=74001053 GT ./. chr2 74002038 . A . . LowGQX END=74002174 GT ./. chr2 74005356 . A . . LowGQX END=74005516 GT ./. chr2 74006999 . A . . LowGQX END=74007243 GT ./. chr2 74011375 . T . . LowGQX END=74011535 GT ./. chr2 74035870 . T . . LowGQX END=74036030 GT ./. chr2 74040603 . G . . LowGQX END=74041354 GT ./. chr2 74042197 . G . . LowGQX END=74044120 GT ./. chr2 74057982 . T . . LowGQX END=74058189 GT ./. chr2 74071928 . C . . LowGQX END=74072028 GT ./. chr2 74072292 . A . . LowGQX END=74072392 GT ./. chr2 74074512 . A . . LowGQX END=74074883 GT ./. chr2 74076438 . T . . LowGQX END=74076617 GT ./. chr2 74077501 . A . . LowGQX END=74077643 GT ./. chr2 74082720 . A . . LowGQX END=74082820 GT ./. chr2 74086379 . A . . LowGQX END=74086496 GT ./. chr2 74087177 . A . . LowGQX END=74087281 GT ./. chr2 74089309 . C . . LowGQX END=74089409 GT ./. chr2 74128437 . C . . LowGQX END=74128595 GT ./. chr2 74129485 . A . . LowGQX END=74129618 GT ./. chr2 74129750 . G . . LowGQX END=74129856 GT ./. chr2 74135397 . T . . LowGQX END=74135497 GT ./. chr2 74135798 . A . . LowGQX END=74135979 GT ./. chr2 74136175 . C . . LowGQX END=74136275 GT ./. chr2 74140610 . A . . LowGQX END=74140776 GT ./. chr2 74141805 . A . . LowGQX END=74142001 GT ./. chr2 74143709 . A . . LowGQX END=74143895 GT ./. chr2 74146557 . A . . LowGQX END=74146705 GT ./. chr2 74153987 . A . . LowGQX END=74154231 GT ./. chr2 74159698 . A . . LowGQX END=74159798 GT ./. chr2 74165986 . C . . LowGQX END=74166201 GT ./. chr2 74173795 . G . . LowGQX END=74174085 GT ./. chr2 74177661 . T . . LowGQX END=74177911 GT ./. chr2 74184201 . T . . LowGQX END=74184419 GT ./. chr2 74185222 . T . . LowGQX END=74185424 GT ./. chr2 74185786 . A . . LowGQX END=74185915 GT ./. chr2 74229807 . G . . LowGQX END=74229967 GT ./. chr2 74230216 . T . . LowGQX END=74230316 GT ./. chr2 74273405 . A . . LowGQX END=74275539 GT ./. chr2 74300673 . C . . LowGQX END=74300773 GT ./. chr2 74307622 . C . . LowGQX END=74307722 GT ./. chr2 74314956 . G . . LowGQX END=74315166 GT ./. chr2 74317023 . G . . LowGQX END=74317175 GT ./. chr2 74320024 . T . . LowGQX END=74320124 GT ./. chr2 74320655 . G . . LowGQX END=74320794 GT ./. chr2 74326402 . G . . LowGQX END=74326740 GT ./. chr2 74327519 . G . . LowGQX END=74329304 GT ./. chr2 74361809 . A . . LowGQX END=74361909 GT ./. chr2 74362598 . T . . LowGQX END=74362837 GT ./. chr2 74369348 . C . . LowGQX END=74369539 GT ./. chr2 74372265 . A . . LowGQX END=74372482 GT ./. chr2 74374837 . G . . LowGQX END=74375053 GT ./. chr2 74383624 . A . . LowGQX END=74383784 GT ./. chr2 74386217 . C . . LowGQX END=74386407 GT ./. chr2 74392306 . T . . LowGQX END=74392479 GT ./. chr2 74394138 . T . . LowGQX END=74394238 GT ./. chr2 74399712 . C . . LowGQX END=74399880 GT ./. chr2 74399888 . T . . LowGQX END=74399988 GT ./. chr2 74400275 . A . . LowGQX END=74400375 GT ./. chr2 74405685 . C . . LowGQX END=74405845 GT ./. chr2 74414698 . T . . LowGQX END=74414798 GT ./. chr2 74425767 . C . . LowGQX END=74425872 GT ./. chr2 74432830 . A . . LowGQX END=74433019 GT ./. chr2 74434829 . A . . LowGQX END=74434956 GT ./. chr2 74435694 . A . . LowGQX END=74435851 GT ./. chr2 74437067 . A . . LowGQX END=74437179 GT ./. chr2 74438313 . T . . LowGQX END=74438421 GT ./. chr2 74438866 . A . . LowGQX END=74438996 GT ./. chr2 74441204 . A . . LowGQX END=74441372 GT ./. chr2 74448562 . T . . LowGQX END=74448662 GT ./. chr2 74449928 . A . . LowGQX END=74450088 GT ./. chr2 74451965 . A . . LowGQX END=74452139 GT ./. chr2 74454082 . A . . LowGQX END=74454260 GT ./. chr2 74454618 . A . . LowGQX END=74454718 GT ./. chr2 74454922 . G . . LowGQX END=74455022 GT ./. chr2 74458350 . T . . LowGQX END=74458450 GT ./. chr2 74459583 . T . . LowGQX END=74459794 GT ./. chr2 74460457 . T . . LowGQX END=74460693 GT ./. chr2 74462226 . A . . LowGQX END=74462344 GT ./. chr2 74466460 . A . . LowGQX END=74466665 GT ./. chr2 74469101 . C . . LowGQX END=74469201 GT ./. chr2 74474161 . A . . LowGQX END=74474437 GT ./. chr2 74475478 . A . . LowGQX END=74475616 GT ./. chr2 74477468 . A . . LowGQX END=74477647 GT ./. chr2 74479304 . A . . LowGQX END=74479518 GT ./. chr2 74480069 . T . . LowGQX END=74480299 GT ./. chr2 74481740 . A . . LowGQX END=74481840 GT ./. chr2 74482900 . A . . LowGQX END=74483062 GT ./. chr2 74486693 . C . . LowGQX END=74486793 GT ./. chr2 74489262 . A . . LowGQX END=74489362 GT ./. chr2 74491272 . A . . LowGQX END=74491429 GT ./. chr2 74492229 . A . . LowGQX END=74492394 GT ./. chr2 74512858 . T . . LowGQX END=74513032 GT ./. chr2 74531614 . A . . LowGQX END=74531810 GT ./. chr2 74542062 . G . . LowGQX END=74542162 GT ./. chr2 74588280 . A . . LowGQX END=74588815 GT ./. chr2 74589128 . C . . LowGQX END=74589320 GT ./. chr2 74589726 . C . . LowGQX END=74589908 GT ./. chr2 74590070 . G . . LowGQX END=74590356 GT ./. chr2 74590370 . G . . LowGQX END=74590611 GT ./. chr2 74590690 . T . . LowGQX END=74590818 GT ./. chr2 74592151 . G . . LowGQX END=74592420 GT ./. chr2 74592591 . T . . LowGQX END=74592836 GT ./. chr2 74592969 . G . . LowGQX END=74593197 GT ./. chr2 74593320 . A . . LowGQX END=74593799 GT ./. chr2 74593859 . C . . LowGQX END=74594111 GT ./. chr2 74594121 . G . . LowGQX END=74594286 GT ./. chr2 74594428 . C . . LowGQX END=74594599 GT ./. chr2 74594772 . A . . LowGQX END=74595043 GT ./. chr2 74595047 . T . . LowGQX END=74595310 GT ./. chr2 74595804 . T . . LowGQX END=74596059 GT ./. chr2 74596174 . A . . LowGQX END=74596670 GT ./. chr2 74597041 . C . . LowGQX END=74597248 GT ./. chr2 74597262 . G . . LowGQX END=74597524 GT ./. chr2 74597542 . A . . LowGQX END=74598004 GT ./. chr2 74598055 . C . . LowGQX END=74598355 GT ./. chr2 74598613 . C . . LowGQX END=74598907 GT ./. chr2 74600004 . A . . LowGQX END=74600135 GT ./. chr2 74601282 . T . . LowGQX END=74601382 GT ./. chr2 74601399 . G . . LowGQX END=74601525 GT ./. chr2 74603818 . G . . LowGQX END=74603941 GT ./. chr2 74604508 . T . . LowGQX END=74604646 GT ./. chr2 74604724 . T . . LowGQX END=74604905 GT ./. chr2 74605076 . T . . LowGQX END=74605424 GT ./. chr2 74607081 . C . . LowGQX END=74607216 GT ./. chr2 74607603 . C . . LowGQX END=74607703 GT ./. chr2 74617683 . T . . LowGQX END=74617783 GT ./. chr2 74618910 . C . . LowGQX END=74619215 GT ./. chr2 74641455 . G . . LowGQX END=74643055 GT ./. chr2 74643137 . C . . LowGQX END=74643369 GT ./. chr2 74644472 . C . . LowGQX END=74644572 GT ./. chr2 74645468 . C . . LowGQX END=74645570 GT ./. chr2 74648801 . C . . LowGQX END=74649017 GT ./. chr2 74649279 . G . . LowGQX END=74649505 GT ./. chr2 74649979 . T . . LowGQX END=74650079 GT ./. chr2 74650430 . T . . LowGQX END=74650530 GT ./. chr2 74650582 . T . . LowGQX END=74650682 GT ./. chr2 74650980 . A . . LowGQX END=74651118 GT ./. chr2 74652000 . A . . LowGQX END=74652105 GT ./. chr2 74652200 . A . . LowGQX END=74652367 GT ./. chr2 74652532 . C . . LowGQX END=74652632 GT ./. chr2 74652695 . A . . LowGQX END=74652831 GT ./. chr2 74653362 . T . . LowGQX END=74653704 GT ./. chr2 74654294 . A . . LowGQX END=74654403 GT ./. chr2 74654549 . A . . LowGQX END=74654722 GT ./. chr2 74655393 . A . . LowGQX END=74655526 GT ./. chr2 74655756 . A . . LowGQX END=74655867 GT ./. chr2 74655973 . A . . LowGQX END=74656073 GT ./. chr2 74656953 . A . . LowGQX END=74657167 GT ./. chr2 74657377 . A . . LowGQX END=74657499 GT ./. chr2 74657569 . G . . LowGQX END=74657669 GT ./. chr2 74657724 . G . . LowGQX END=74657824 GT ./. chr2 74659405 . C . . LowGQX END=74659555 GT ./. chr2 74659590 . T . . LowGQX END=74659796 GT ./. chr2 74666664 . G . . LowGQX END=74666764 GT ./. chr2 74668831 . A . . LowGQX END=74668946 GT ./. chr2 74682223 . C . . LowGQX END=74682323 GT ./. chr2 74682421 . A . . LowGQX END=74682728 GT ./. chr2 74682943 . A . . LowGQX END=74683078 GT ./. chr2 74683228 . A . . LowGQX END=74683427 GT ./. chr2 74684453 . C . . LowGQX END=74684994 GT ./. chr2 74685715 . G . . LowGQX END=74685815 GT ./. chr2 74685999 . A . . LowGQX END=74686245 GT ./. chr2 74686768 . A . . LowGQX END=74686875 GT ./. chr2 74686998 . A . . LowGQX END=74687179 GT ./. chr2 74687346 . A . . LowGQX END=74687811 GT ./. chr2 74688351 . C . . LowGQX END=74690191 GT ./. chr2 74690266 . A . . LowGQX END=74690565 GT ./. chr2 74691572 . G . . LowGQX END=74691901 GT ./. chr2 74691972 . G . . LowGQX END=74692426 GT ./. chr2 74699244 . T . . LowGQX END=74699382 GT ./. chr2 74699483 . A . . LowGQX END=74699600 GT ./. chr2 74699692 . G . . LowGQX END=74699792 GT ./. chr2 74701671 . C . . LowGQX END=74701932 GT ./. chr2 74701984 . T . . LowGQX END=74702245 GT ./. chr2 74702330 . C . . LowGQX END=74702532 GT ./. chr2 74702737 . A . . LowGQX END=74702856 GT ./. chr2 74707894 . A . . LowGQX END=74708012 GT ./. chr2 74708081 . A . . LowGQX END=74708214 GT ./. chr2 74708348 . A . . LowGQX END=74708502 GT ./. chr2 74708573 . T . . LowGQX END=74708673 GT ./. chr2 74708942 . A . . LowGQX END=74709967 GT ./. chr2 74710193 . A . . LowGQX END=74710293 GT ./. chr2 74710444 . T . . LowGQX END=74710544 GT ./. chr2 74710631 . G . . LowGQX END=74710731 GT ./. chr2 74717150 . A . . LowGQX END=74717257 GT ./. chr2 74717369 . A . . LowGQX END=74717603 GT ./. chr2 74717775 . T . . LowGQX END=74717875 GT ./. chr2 74718234 . T . . LowGQX END=74718334 GT ./. chr2 74718413 . T . . LowGQX END=74718513 GT ./. chr2 74718606 . A . . LowGQX END=74718878 GT ./. chr2 74719107 . C . . LowGQX END=74719207 GT ./. chr2 74719263 . C . . LowGQX END=74719363 GT ./. chr2 74719429 . A . . LowGQX END=74719575 GT ./. chr2 74719771 . A . . LowGQX END=74719877 GT ./. chr2 74720047 . A . . LowGQX END=74720413 GT ./. chr2 74725052 . C . . LowGQX END=74725448 GT ./. chr2 74726459 . C . . LowGQX END=74726665 GT ./. chr2 74729782 . T . . LowGQX END=74729989 GT ./. chr2 74732244 . A . . LowGQX END=74732344 GT ./. chr2 74732457 . C . . LowGQX END=74732557 GT ./. chr2 74732673 . A . . LowGQX END=74732773 GT ./. chr2 74732831 . C . . LowGQX END=74732931 GT ./. chr2 74733077 . A . . LowGQX END=74733187 GT ./. chr2 74733294 . G . . LowGQX END=74733394 GT ./. chr2 74733857 . A . . LowGQX END=74734014 GT ./. chr2 74734167 . A . . LowGQX END=74734277 GT ./. chr2 74734700 . C . . LowGQX END=74734800 GT ./. chr2 74741307 . G . . LowGQX END=74741407 GT ./. chr2 74741862 . T . . LowGQX END=74742402 GT ./. chr2 74742758 . A . . LowGQX END=74743000 GT ./. chr2 74743098 . A . . LowGQX END=74743559 GT ./. chr2 74745571 . G . . LowGQX END=74745732 GT ./. chr2 74746165 . A . . LowGQX END=74746360 GT ./. chr2 74746681 . A . . LowGQX END=74746876 GT ./. chr2 74747040 . A . . LowGQX END=74747164 GT ./. chr2 74749705 . A . . LowGQX END=74749901 GT ./. chr2 74749981 . A . . LowGQX END=74750174 GT ./. chr2 74750244 . A . . LowGQX END=74750348 GT ./. chr2 74750435 . A . . LowGQX END=74750667 GT ./. chr2 74751048 . A . . LowGQX END=74751437 GT ./. chr2 74752120 . C . . LowGQX END=74752330 GT ./. chr2 74752619 . C . . LowGQX END=74752857 GT ./. chr2 74753896 . C . . LowGQX END=74753996 GT ./. chr2 74754066 . A . . LowGQX END=74754276 GT ./. chr2 74754373 . A . . LowGQX END=74754493 GT ./. chr2 74754596 . A . . LowGQX END=74754720 GT ./. chr2 74754861 . A . . LowGQX END=74754968 GT ./. chr2 74755051 . C . . LowGQX END=74755151 GT ./. chr2 74755362 . G . . LowGQX END=74755462 GT ./. chr2 74755531 . A . . LowGQX END=74755631 GT ./. chr2 74755876 . A . . LowGQX END=74756629 GT ./. chr2 74756705 . A . . LowGQX END=74756849 GT ./. chr2 74757083 . T . . LowGQX END=74757691 GT ./. chr2 74757693 . G . . LowGQX END=74758284 GT ./. chr2 74758415 . C . . LowGQX END=74758881 GT ./. chr2 74758932 . C . . LowGQX END=74759104 GT ./. chr2 74759695 . G . . LowGQX END=74759893 GT ./. chr2 74759896 . T . . LowGQX END=74760164 GT ./. chr2 74760720 . A . . LowGQX END=74760820 GT ./. chr2 74761000 . A . . LowGQX END=74761123 GT ./. chr2 74761225 . A . . LowGQX END=74761366 GT ./. chr2 74761441 . A . . LowGQX END=74761561 GT ./. chr2 74761656 . A . . LowGQX END=74761904 GT ./. chr2 74762417 . A . . LowGQX END=74762617 GT ./. chr2 74762693 . C . . LowGQX END=74762885 GT ./. chr2 74763121 . A . . LowGQX END=74763330 GT ./. chr2 74763416 . A . . LowGQX END=74763601 GT ./. chr2 74763834 . A . . LowGQX END=74764058 GT ./. chr2 74776494 . A . . LowGQX END=74776597;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 74776598 . C . . LowGQX . GT ./. chr2 74776599 . A . . LowGQX END=74776645;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 74776646 . G . . LowGQX END=74776713 GT ./. chr2 74777310 . A . . LowGQX END=74777478 GT ./. chr2 74779447 . A . . LowGQX END=74779764 GT ./. chr2 74781862 . G . . LowGQX END=74782023 GT ./. chr2 74782279 . A . . LowGQX END=74782583 GT ./. chr2 74782699 . C . . LowGQX END=74782799 GT ./. chr2 74783019 . A . . LowGQX END=74783208 GT ./. chr2 74783433 . A . . LowGQX END=74784244 GT ./. chr2 74785811 . A . . LowGQX END=74786004 GT ./. chr2 74786781 . T . . LowGQX END=74786881 GT ./. chr2 74787236 . G . . LowGQX END=74787421 GT ./. chr2 74789342 . G . . LowGQX END=74789553 GT ./. chr2 74802541 . T . . LowGQX END=74802709 GT ./. chr2 74803581 . A . . LowGQX END=74803748 GT ./. chr2 74808799 . A . . LowGQX END=74808977 GT ./. chr2 74834180 . A . . LowGQX END=74834353 GT ./. chr2 74842089 . A . . LowGQX END=74842279 GT ./. chr2 74867161 . A . . LowGQX END=74867405 GT ./. chr2 74881471 . T . . LowGQX END=74881651 GT ./. chr2 74882374 . T . . LowGQX END=74882474 GT ./. chr2 74883659 . A . . LowGQX END=74883815 GT ./. chr2 74884672 . G . . LowGQX END=74884772 GT ./. chr2 74884978 . A . . LowGQX END=74885081 GT ./. chr2 74889856 . T . . LowGQX END=74889956 GT ./. chr2 74900582 . A . . LowGQX END=74900706 GT ./. chr2 74900802 . A . . LowGQX END=74900958 GT ./. chr2 74901623 . A . . LowGQX END=74901806 GT ./. chr2 74902013 . A . . LowGQX END=74902165 GT ./. chr2 74902287 . A . . LowGQX END=74902514 GT ./. chr2 74902650 . A . . LowGQX END=74902764 GT ./. chr2 74902874 . A . . LowGQX END=74903039 GT ./. chr2 74906383 . A . . LowGQX END=74906483 GT ./. chr2 74906724 . A . . LowGQX END=74907339 GT ./. chr2 75061657 . C . . LowGQX END=75061822 GT ./. chr2 75081369 . C . . LowGQX END=75081634 GT ./. chr2 75094712 . T . . LowGQX END=75094963 GT ./. chr2 75099376 . C . . LowGQX END=75099598 GT ./. chr2 75100352 . G . . LowGQX END=75100550 GT ./. chr2 75100920 . A . . LowGQX END=75101122 GT ./. chr2 75101342 . G . . LowGQX END=75101628 GT ./. chr2 75104242 . G . . LowGQX END=75104500 GT ./. chr2 75105764 . T . . LowGQX END=75106100 GT ./. chr2 75107341 . A . . LowGQX END=75107748 GT ./. chr2 75108787 . C . . LowGQX END=75109038 GT ./. chr2 75109196 . A . . LowGQX END=75109418 GT ./. chr2 75112570 . A . . LowGQX END=75112768 GT ./. chr2 75113370 . G . . LowGQX END=75113852 GT ./. chr2 75114979 . A . . LowGQX END=75115237 GT ./. chr2 75116321 . C . . LowGQX END=75116657 GT ./. chr2 75117873 . C . . LowGQX END=75118120 GT ./. chr2 75185770 . A . . LowGQX END=75186022 GT ./. chr2 75186461 . T . . LowGQX END=75186561 GT ./. chr2 75187203 . G . . LowGQX END=75187303 GT ./. chr2 75187674 . A . . LowGQX END=75187774 GT ./. chr2 75196493 . T . . LowGQX END=75196593 GT ./. chr2 75276557 . G . . LowGQX END=75276853 GT ./. chr2 75278373 . C . . LowGQX END=75278577 GT ./. chr2 75280730 . A . . LowGQX END=75280939 GT ./. chr2 75347698 . A . . LowGQX END=75347897 GT ./. chr2 75425670 . A . . LowGQX END=75426063 GT ./. chr2 75720360 . C . . LowGQX END=75720738 GT ./. chr2 75744913 . A . . LowGQX END=75745013 GT ./. chr2 75745175 . C . . LowGQX END=75745275 GT ./. chr2 75873932 . G . . LowGQX END=75874039 GT ./. chr2 75874226 . A . . LowGQX END=75874348 GT ./. chr2 75879266 . A . . LowGQX END=75879436 GT ./. chr2 75879647 . A . . LowGQX END=75879786 GT ./. chr2 75881860 . A . . LowGQX END=75882046 GT ./. chr2 75882188 . A . . LowGQX END=75882414 GT ./. chr2 75891790 . A . . LowGQX END=75891912 GT ./. chr2 75893053 . A . . LowGQX END=75893182 GT ./. chr2 75897262 . A . . LowGQX END=75897413 GT ./. chr2 75899060 . T . . LowGQX END=75899160 GT ./. chr2 75900508 . T . . LowGQX END=75900659 GT ./. chr2 75907317 . A . . LowGQX END=75907443 GT ./. chr2 75914921 . A . . LowGQX END=75915106 GT ./. chr2 75916080 . C . . LowGQX END=75916420 GT ./. chr2 75917043 . T . . LowGQX END=75917210 GT ./. chr2 75917702 . T . . LowGQX END=75917855 GT ./. chr2 75919101 . A . . LowGQX END=75919229 GT ./. chr2 75921365 . A . . LowGQX END=75921556 GT ./. chr2 75923324 . A . . LowGQX END=75923494 GT ./. chr2 75928314 . A . . LowGQX END=75928416 GT ./. chr2 75929295 . C . . LowGQX END=75929552 GT ./. chr2 75933647 . A . . LowGQX END=75933780 GT ./. chr2 75937704 . T . . LowGQX END=75937984 GT ./. chr2 76975820 . G . . LowGQX END=76976043 GT ./. chr2 77745437 . T . . LowGQX END=77746991 GT ./. chr2 77748746 . C . . LowGQX END=77748846 GT ./. chr2 77749188 . C . . LowGQX END=77749288 GT ./. chr2 79253208 . G . . LowGQX END=79253308 GT ./. chr2 79253837 . A . . LowGQX END=79253960 GT ./. chr2 79254158 . A . . LowGQX END=79254300 GT ./. chr2 79254931 . A . . LowGQX END=79255062 GT ./. chr2 79255319 . T . . LowGQX END=79255419 GT ./. chr2 79312324 . T . . LowGQX END=79312424 GT ./. chr2 79312532 . C . . LowGQX END=79312732 GT ./. chr2 79313451 . T . . LowGQX END=79313633 GT ./. chr2 79313881 . T . . LowGQX END=79314059 GT ./. chr2 79314657 . T . . LowGQX END=79314757 GT ./. chr2 79347970 . G . . LowGQX END=79348070 GT ./. chr2 79348686 . A . . LowGQX END=79348897 GT ./. chr2 79349112 . A . . LowGQX END=79349254 GT ./. chr2 79349965 . A . . LowGQX END=79350081 GT ./. chr2 79350258 . T . . LowGQX END=79350358 GT ./. chr2 79384336 . T . . LowGQX END=79384436 GT ./. chr2 79384696 . A . . LowGQX END=79384827 GT ./. chr2 79385450 . A . . LowGQX END=79385592 GT ./. chr2 79385775 . A . . LowGQX END=79385898 GT ./. chr2 79386444 . A . . LowGQX END=79386544 GT ./. chr2 79422916 . T . . LowGQX END=79423016 GT ./. chr2 79750337 . A . . LowGQX END=79750437 GT ./. chr2 79878677 . G . . LowGQX END=79878787 GT ./. chr2 79914656 . G . . LowGQX END=79914756 GT ./. chr2 79971511 . A . . LowGQX END=79971711 GT ./. chr2 80085137 . A . . LowGQX END=80085308 GT ./. chr2 80096940 . A . . LowGQX END=80097064 GT ./. chr2 80101200 . A . . LowGQX END=80101471 GT ./. chr2 80136718 . A . . LowGQX END=80136926 GT ./. chr2 80529374 . A . . LowGQX END=80530947 GT ./. chr2 80540683 . C . . LowGQX END=80540783 GT ./. chr2 80555400 . A . . LowGQX END=80555500 GT ./. chr2 80620327 . T . . LowGQX END=80620427 GT ./. chr2 80646572 . A . . LowGQX END=80646729 GT ./. chr2 80772104 . C . . LowGQX END=80772204 GT ./. chr2 80773030 . A . . LowGQX END=80773191 GT ./. chr2 80782816 . A . . LowGQX END=80783021 GT ./. chr2 80801286 . A . . LowGQX END=80801442 GT ./. chr2 80808829 . A . . LowGQX END=80808947 GT ./. chr2 80816427 . A . . LowGQX END=80816613 GT ./. chr2 80831197 . A . . LowGQX END=80831307 GT ./. chr2 80835307 . A . . LowGQX END=80835446 GT ./. chr2 80846209 . G . . LowGQX END=80846354 GT ./. chr2 80874708 . A . . LowGQX END=80875000 GT ./. chr2 84517943 . A . . LowGQX END=84518399 GT ./. chr2 84650793 . G . . LowGQX END=84650948 GT ./. chr2 84652488 . C . . LowGQX END=84652779 GT ./. chr2 84658581 . A . . LowGQX END=84658835 GT ./. chr2 84660389 . G . . LowGQX END=84660611 GT ./. chr2 84668120 . G . . LowGQX END=84668280 GT ./. chr2 84668320 . T . . LowGQX END=84668635 GT ./. chr2 84670357 . C . . LowGQX END=84670576 GT ./. chr2 84676013 . T . . LowGQX END=84676113 GT ./. chr2 84676722 . T . . LowGQX END=84676928 GT ./. chr2 84686246 . G . . LowGQX END=84686445 GT ./. chr2 84744950 . G . . LowGQX END=84745176 GT ./. chr2 84752668 . A . . LowGQX END=84752863 GT ./. chr2 84756027 . G . . LowGQX END=84756291 GT ./. chr2 84771356 . G . . LowGQX END=84771625 GT ./. chr2 84774391 . G . . LowGQX END=84774571 GT ./. chr2 84774615 . G . . LowGQX END=84774737 GT ./. chr2 84775411 . G . . LowGQX END=84775591 GT ./. chr2 84777011 . A . . LowGQX END=84777184 GT ./. chr2 84780040 . A . . LowGQX END=84780161 GT ./. chr2 84784857 . A . . LowGQX END=84785062 GT ./. chr2 84800539 . T . . LowGQX END=84800714 GT ./. chr2 84804379 . A . . LowGQX END=84804535 GT ./. chr2 84806619 . T . . LowGQX END=84806806 GT ./. chr2 84811121 . A . . LowGQX END=84811386 GT ./. chr2 84815949 . G . . LowGQX END=84816079 GT ./. chr2 84821095 . G . . LowGQX END=84821210 GT ./. chr2 84822769 . G . . LowGQX END=84822914 GT ./. chr2 84831462 . G . . LowGQX END=84831676 GT ./. chr2 84832620 . T . . LowGQX END=84832720 GT ./. chr2 84834099 . G . . LowGQX END=84834220 GT ./. chr2 84838797 . G . . LowGQX END=84838979 GT ./. chr2 84844008 . A . . LowGQX END=84844159 GT ./. chr2 84846808 . G . . LowGQX END=84847029 GT ./. chr2 84848314 . G . . LowGQX END=84848480 GT ./. chr2 84848561 . G . . LowGQX END=84848676 GT ./. chr2 84851388 . G . . LowGQX END=84851515 GT ./. chr2 84851588 . G . . LowGQX END=84851745 GT ./. chr2 84852025 . G . . LowGQX END=84852188 GT ./. chr2 84861627 . G . . LowGQX END=84861766 GT ./. chr2 84864333 . G . . LowGQX END=84864502 GT ./. chr2 84867553 . G . . LowGQX END=84867703 GT ./. chr2 84869070 . G . . LowGQX END=84869230 GT ./. chr2 84880442 . G . . LowGQX END=84880999 GT ./. chr2 84881783 . G . . LowGQX END=84881907 GT ./. chr2 84885415 . G . . LowGQX END=84885599 GT ./. chr2 84886109 . C . . LowGQX END=84886294 GT ./. chr2 84896412 . G . . LowGQX END=84896635 GT ./. chr2 84897451 . G . . LowGQX END=84897631 GT ./. chr2 84899450 . G . . LowGQX END=84899609 GT ./. chr2 84904128 . G . . LowGQX END=84904261 GT ./. chr2 84908480 . G . . LowGQX END=84908653 GT ./. chr2 84912449 . G . . LowGQX END=84912597 GT ./. chr2 84913537 . A . . LowGQX END=84913695 GT ./. chr2 84915562 . G . . LowGQX END=84915752 GT ./. chr2 84921372 . G . . LowGQX END=84921605 GT ./. chr2 84924698 . G . . LowGQX END=84924915 GT ./. chr2 84926717 . G . . LowGQX END=84926859 GT ./. chr2 84928220 . G . . LowGQX END=84928464 GT ./. chr2 84930518 . G . . LowGQX END=84930687 GT ./. chr2 84931190 . G . . LowGQX END=84931427 GT ./. chr2 84932609 . G . . LowGQX END=84932872 GT ./. chr2 84933969 . A . . LowGQX END=84934144 GT ./. chr2 84934643 . G . . LowGQX END=84934841 GT ./. chr2 84936466 . G . . LowGQX END=84936671 GT ./. chr2 84937410 . G . . LowGQX END=84937580 GT ./. chr2 84940218 . G . . LowGQX END=84940384 GT ./. chr2 84942668 . T . . LowGQX END=84942768 GT ./. chr2 84945327 . G . . LowGQX END=84945509 GT ./. chr2 84949718 . C . . LowGQX END=84949929 GT ./. chr2 84954792 . G . . LowGQX END=84955027 GT ./. chr2 84960567 . G . . LowGQX END=84960704 GT ./. chr2 84972203 . G . . LowGQX END=84972374 GT ./. chr2 84989878 . G . . LowGQX END=84990078 GT ./. chr2 85008616 . G . . LowGQX END=85008778 GT ./. chr2 85011840 . A . . LowGQX END=85011940 GT ./. chr2 85012733 . G . . LowGQX END=85012881 GT ./. chr2 85014287 . G . . LowGQX END=85014467 GT ./. chr2 85023429 . G . . LowGQX END=85023550 GT ./. chr2 85024660 . G . . LowGQX END=85024804 GT ./. chr2 85032788 . G . . LowGQX END=85032919 GT ./. chr2 85035538 . G . . LowGQX END=85035707 GT ./. chr2 85039464 . G . . LowGQX END=85039651 GT ./. chr2 85040168 . T . . LowGQX END=85040268 GT ./. chr2 85041094 . G . . LowGQX END=85041147 GT ./. chr2 85041148 . T . . LowGQX END=85041247;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 85042984 . G . . LowGQX END=85043208 GT ./. chr2 85046428 . G . . LowGQX END=85046533 GT ./. chr2 85049040 . G . . LowGQX END=85049225 GT ./. chr2 85051066 . A . . LowGQX END=85051336 GT ./. chr2 85059174 . G . . LowGQX END=85059274 GT ./. chr2 85065310 . A . . LowGQX END=85065410 GT ./. chr2 85066272 . C . . LowGQX END=85066448 GT ./. chr2 85068984 . C . . LowGQX END=85069132 GT ./. chr2 85097348 . C . . LowGQX END=85097910 GT ./. chr2 85108000 . A . . LowGQX END=85108164 GT ./. chr2 85133140 . A . . LowGQX END=85133244 GT ./. chr2 85133481 . C . . LowGQX END=85133581 GT ./. chr2 85198473 . T . . LowGQX END=85198633 GT ./. chr2 85255011 . G . . LowGQX END=85255180 GT ./. chr2 85262138 . G . . LowGQX END=85262279 GT ./. chr2 85270686 . G . . LowGQX END=85270789 GT ./. chr2 85273226 . T . . LowGQX END=85273402 GT ./. chr2 85276488 . G . . LowGQX END=85276772 GT ./. chr2 85280270 . G . . LowGQX END=85280533 GT ./. chr2 85360795 . C . . LowGQX END=85361059 GT ./. chr2 85361121 . T . . LowGQX END=85361221 GT ./. chr2 85361444 . A . . LowGQX END=85361576 GT ./. chr2 85510610 . C . . LowGQX END=85510710 GT ./. chr2 85529565 . A . . LowGQX END=85529742 GT ./. chr2 85531016 . A . . LowGQX END=85531123 GT ./. chr2 85531370 . C . . LowGQX END=85531470 GT ./. chr2 85532341 . C . . LowGQX END=85532529 GT ./. chr2 85533327 . A . . LowGQX END=85533491 GT ./. chr2 85533573 . A . . LowGQX END=85533685 GT ./. chr2 85534753 . T . . LowGQX END=85534853 GT ./. chr2 85536150 . A . . LowGQX END=85536588 GT ./. chr2 85549747 . A . . LowGQX END=85549923 GT ./. chr2 85552001 . C . . LowGQX END=85552122 GT ./. chr2 85553630 . C . . LowGQX END=85554809 GT ./. chr2 85555013 . A . . LowGQX END=85555113 GT ./. chr2 85570363 . A . . LowGQX END=85570507 GT ./. chr2 85570760 . A . . LowGQX END=85570924 GT ./. chr2 85571120 . A . . LowGQX END=85571291 GT ./. chr2 85571360 . A . . LowGQX END=85571474 GT ./. chr2 85571715 . A . . LowGQX END=85571858 GT ./. chr2 85572898 . A . . LowGQX END=85573220 GT ./. chr2 85576505 . A . . LowGQX END=85576707 GT ./. chr2 85577161 . A . . LowGQX END=85577367 GT ./. chr2 85577901 . A . . LowGQX END=85578147 GT ./. chr2 85578801 . A . . LowGQX END=85578988 GT ./. chr2 85581446 . T . . LowGQX END=85581633 GT ./. chr2 85584299 . A . . LowGQX END=85584399 GT ./. chr2 85589297 . T . . LowGQX END=85589397 GT ./. chr2 85590205 . C . . LowGQX END=85590305 GT ./. chr2 85595794 . C . . LowGQX END=85595894 GT ./. chr2 85596858 . A . . LowGQX END=85596958 GT ./. chr2 85598207 . A . . LowGQX END=85598404 GT ./. chr2 85598561 . A . . LowGQX END=85598688 GT ./. chr2 85604465 . A . . LowGQX END=85604600 GT ./. chr2 85614184 . G . . LowGQX END=85614284 GT ./. chr2 85616863 . C . . LowGQX END=85616963 GT ./. chr2 85617139 . A . . LowGQX END=85617624 GT ./. chr2 85617882 . G . . LowGQX END=85618086 GT ./. chr2 85621939 . C . . LowGQX END=85622154 GT ./. chr2 85622625 . C . . LowGQX END=85622752 GT ./. chr2 85625141 . A . . LowGQX END=85625278 GT ./. chr2 85625750 . C . . LowGQX END=85625961 GT ./. chr2 85626257 . A . . LowGQX END=85626411 GT ./. chr2 85628286 . A . . LowGQX END=85628455 GT ./. chr2 85628650 . A . . LowGQX END=85628809 GT ./. chr2 85628906 . A . . LowGQX END=85629083 GT ./. chr2 85629208 . A . . LowGQX END=85629308 GT ./. chr2 85661164 . T . . LowGQX END=85661264 GT ./. chr2 85661428 . A . . LowGQX END=85661528 GT ./. chr2 85661558 . G . . LowGQX END=85661658 GT ./. chr2 85662047 . A . . LowGQX END=85662277 GT ./. chr2 85662528 . A . . LowGQX END=85662628 GT ./. chr2 85662787 . A . . LowGQX END=85662950 GT ./. chr2 85663587 . A . . LowGQX END=85663708 GT ./. chr2 85766407 . C . . LowGQX END=85766507 GT ./. chr2 85768195 . C . . LowGQX END=85768295 GT ./. chr2 85768376 . A . . LowGQX END=85768503 GT ./. chr2 85768754 . A . . LowGQX END=85768905 GT ./. chr2 85768950 . A . . LowGQX END=85769098 GT ./. chr2 85769276 . A . . LowGQX END=85769499 GT ./. chr2 85769686 . A . . LowGQX END=85769873 GT ./. chr2 85770022 . A . . LowGQX END=85770162 GT ./. chr2 85770791 . A . . LowGQX END=85770898 GT ./. chr2 85777006 . A . . LowGQX END=85777301 GT ./. chr2 85777627 . A . . LowGQX END=85777925 GT ./. chr2 85777997 . C . . LowGQX END=85778247 GT ./. chr2 85778552 . G . . LowGQX END=85778785 GT ./. chr2 85778884 . A . . LowGQX END=85779156 GT ./. chr2 85779488 . G . . LowGQX END=85779742 GT ./. chr2 85780011 . A . . LowGQX END=85780245 GT ./. chr2 85780304 . C . . LowGQX END=85780672 GT ./. chr2 85781215 . C . . LowGQX END=85781481 GT ./. chr2 85782556 . C . . LowGQX END=85782765 GT ./. chr2 85783254 . C . . LowGQX END=85783435 GT ./. chr2 85785512 . T . . LowGQX END=85785824 GT ./. chr2 85785989 . T . . LowGQX END=85786250 GT ./. chr2 85787887 . T . . LowGQX END=85788160 GT ./. chr2 85788458 . A . . LowGQX END=85788603 GT ./. chr2 85804722 . G . . LowGQX END=85804822 GT ./. chr2 85806100 . C . . LowGQX END=85806293 GT ./. chr2 85806864 . G . . LowGQX END=85806998 GT ./. chr2 85808697 . A . . LowGQX END=85808842 GT ./. chr2 85811506 . C . . LowGQX END=85811666 GT ./. chr2 85818846 . A . . LowGQX END=85818988 GT ./. chr2 85820069 . A . . LowGQX END=85820283 GT ./. chr2 85822880 . G . . LowGQX END=85822980 GT ./. chr2 85823640 . A . . LowGQX END=85823775 GT ./. chr2 85823850 . T . . LowGQX END=85824057 GT ./. chr2 85824076 . C . . LowGQX END=85824320 GT ./. chr2 85824566 . A . . LowGQX END=85824686 GT ./. chr2 85826197 . C . . LowGQX END=85826443 GT ./. chr2 85826646 . A . . LowGQX END=85826828 GT ./. chr2 85827012 . A . . LowGQX END=85827144 GT ./. chr2 85827452 . T . . LowGQX END=85827552 GT ./. chr2 85828078 . C . . LowGQX END=85828292 GT ./. chr2 85828445 . G . . LowGQX END=85828608 GT ./. chr2 85828990 . C . . LowGQX END=85829090 GT ./. chr2 85836066 . G . . LowGQX END=85836193 GT ./. chr2 85836556 . A . . LowGQX END=85836712 GT ./. chr2 85838621 . T . . LowGQX END=85839134 GT ./. chr2 85839416 . C . . LowGQX END=85839516 GT ./. chr2 85843317 . A . . LowGQX END=85843589 GT ./. chr2 85846328 . T . . LowGQX END=85846428 GT ./. chr2 85848606 . A . . LowGQX END=85848706 GT ./. chr2 85850748 . G . . LowGQX END=85850908 GT ./. chr2 85852630 . T . . LowGQX END=85852817 GT ./. chr2 85857842 . A . . LowGQX END=85858072 GT ./. chr2 85863165 . T . . LowGQX END=85863265 GT ./. chr2 85864476 . C . . LowGQX END=85864576 GT ./. chr2 85866324 . A . . LowGQX END=85866517 GT ./. chr2 85868097 . A . . LowGQX END=85868287 GT ./. chr2 85872069 . A . . LowGQX END=85872222 GT ./. chr2 85875047 . C . . LowGQX END=85875147 GT ./. chr2 85875792 . G . . LowGQX END=85875958 GT ./. chr2 85888545 . T . . LowGQX END=85888710 GT ./. chr2 85889101 . G . . LowGQX END=85889284 GT ./. chr2 85890418 . T . . LowGQX END=85890666 GT ./. chr2 85890736 . A . . LowGQX END=85891022 GT ./. chr2 85892361 . G . . LowGQX END=85892469;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 85892470 . A . . LowGQX END=85892553 GT ./. chr2 85892678 . G . . LowGQX END=85892969 GT ./. chr2 85893689 . C . . LowGQX END=85893917 GT ./. chr2 85894178 . G . . LowGQX END=85894352 GT ./. chr2 85894751 . G . . LowGQX END=85894981 GT ./. chr2 85895189 . C . . LowGQX END=85895361 GT ./. chr2 85921518 . A . . LowGQX END=85921618 GT ./. chr2 85922029 . T . . LowGQX END=85922129 GT ./. chr2 85922441 . A . . LowGQX END=85922549 GT ./. chr2 85923079 . A . . LowGQX END=85923182 GT ./. chr2 85924627 . A . . LowGQX END=85924803 GT ./. chr2 85925496 . G . . LowGQX END=85925596 GT ./. chr2 85925685 . A . . LowGQX END=85925871 GT ./. chr2 85981311 . C . . LowGQX END=85982083 GT ./. chr2 85991112 . A . . LowGQX END=85991308 GT ./. chr2 85999741 . A . . LowGQX END=86000032 GT ./. chr2 86013961 . A . . LowGQX END=86014061 GT ./. chr2 86067216 . A . . LowGQX END=86067639 GT ./. chr2 86071468 . A . . LowGQX END=86071729 GT ./. chr2 86073449 . G . . LowGQX END=86073738 GT ./. chr2 86074933 . A . . LowGQX END=86075379 GT ./. chr2 86075446 . T . . LowGQX END=86075546 GT ./. chr2 86078713 . T . . LowGQX END=86078827 GT ./. chr2 86079982 . C . . LowGQX END=86080221 GT ./. chr2 86088253 . G . . LowGQX END=86088467 GT ./. chr2 86090434 . A . . LowGQX END=86090660 GT ./. chr2 86094677 . A . . LowGQX END=86094792 GT ./. chr2 86097303 . T . . LowGQX END=86097403 GT ./. chr2 86107971 . A . . LowGQX END=86108071 GT ./. chr2 86115896 . C . . LowGQX END=86116080 GT ./. chr2 86254544 . T . . LowGQX END=86254649 GT ./. chr2 86255006 . A . . LowGQX END=86255175 GT ./. chr2 86255715 . A . . LowGQX END=86255837 GT ./. chr2 86257317 . A . . LowGQX END=86257522 GT ./. chr2 86258451 . A . . LowGQX END=86258761 GT ./. chr2 86259393 . A . . LowGQX END=86259508 GT ./. chr2 86260782 . A . . LowGQX END=86260913 GT ./. chr2 86265821 . A . . LowGQX END=86265983 GT ./. chr2 86266448 . A . . LowGQX END=86266588 GT ./. chr2 86267513 . A . . LowGQX END=86267685 GT ./. chr2 86269010 . A . . LowGQX END=86269229 GT ./. chr2 86270095 . A . . LowGQX END=86270321 GT ./. chr2 86271260 . A . . LowGQX END=86271466 GT ./. chr2 86272393 . C . . LowGQX END=86272493 GT ./. chr2 86272687 . A . . LowGQX END=86272928 GT ./. chr2 86274286 . A . . LowGQX END=86274389 GT ./. chr2 86276005 . A . . LowGQX END=86276168 GT ./. chr2 86276275 . C . . LowGQX END=86276375 GT ./. chr2 86279938 . A . . LowGQX END=86280126 GT ./. chr2 86281261 . A . . LowGQX END=86281415 GT ./. chr2 86292395 . A . . LowGQX END=86292591 GT ./. chr2 86297139 . A . . LowGQX END=86297398 GT ./. chr2 86302151 . A . . LowGQX END=86302386 GT ./. chr2 86304980 . A . . LowGQX END=86305107 GT ./. chr2 86305215 . G . . LowGQX END=86305410 GT ./. chr2 86307937 . A . . LowGQX END=86308104 GT ./. chr2 86308722 . A . . LowGQX END=86308832 GT ./. chr2 86310199 . C . . LowGQX END=86310299 GT ./. chr2 86315687 . A . . LowGQX END=86315795 GT ./. chr2 86315901 . T . . LowGQX END=86316001 GT ./. chr2 86316943 . A . . LowGQX END=86317055 GT ./. chr2 86325682 . C . . LowGQX END=86325931 GT ./. chr2 86327089 . A . . LowGQX END=86327298 GT ./. chr2 86332812 . C . . LowGQX END=86332912 GT ./. chr2 86333313 . C . . LowGQX END=86333477 GT ./. chr2 86334233 . T . . LowGQX END=86334333 GT ./. chr2 86335450 . T . . LowGQX END=86335550 GT ./. chr2 86335592 . A . . LowGQX END=86335692 GT ./. chr2 86338058 . G . . LowGQX END=86338158 GT ./. chr2 86338209 . G . . LowGQX END=86338309 GT ./. chr2 86343638 . A . . LowGQX END=86343738 GT ./. chr2 86344176 . A . . LowGQX END=86344285 GT ./. chr2 86346042 . A . . LowGQX END=86346212 GT ./. chr2 86348600 . A . . LowGQX END=86348720 GT ./. chr2 86350805 . T . . LowGQX END=86350905 GT ./. chr2 86352112 . G . . LowGQX END=86352212 GT ./. chr2 86352559 . T . . LowGQX END=86352659 GT ./. chr2 86352911 . T . . LowGQX END=86353011 GT ./. chr2 86354282 . A . . LowGQX END=86354431 GT ./. chr2 86355040 . T . . LowGQX END=86355140 GT ./. chr2 86357767 . G . . LowGQX END=86357867 GT ./. chr2 86358109 . C . . LowGQX END=86358266 GT ./. chr2 86359439 . A . . LowGQX END=86359550 GT ./. chr2 86360291 . T . . LowGQX END=86360391 GT ./. chr2 86360465 . T . . LowGQX END=86360565 GT ./. chr2 86361408 . T . . LowGQX END=86361508 GT ./. chr2 86361960 . A . . LowGQX END=86362113 GT ./. chr2 86362993 . C . . LowGQX END=86363183 GT ./. chr2 86363615 . A . . LowGQX END=86363715 GT ./. chr2 86364073 . G . . LowGQX END=86364266 GT ./. chr2 86364588 . A . . LowGQX END=86364688 GT ./. chr2 86371390 . C . . LowGQX END=86372005 GT ./. chr2 86373190 . C . . LowGQX END=86373321 GT ./. chr2 86374824 . C . . LowGQX END=86374957 GT ./. chr2 86378419 . C . . LowGQX END=86378649 GT ./. chr2 86380640 . C . . LowGQX END=86380740 GT ./. chr2 86385704 . G . . LowGQX END=86385845 GT ./. chr2 86386440 . T . . LowGQX END=86386795 GT ./. chr2 86389041 . G . . LowGQX END=86389258 GT ./. chr2 86393630 . C . . LowGQX END=86393768 GT ./. chr2 86397870 . A . . LowGQX END=86397970 GT ./. chr2 86398330 . C . . LowGQX END=86398545 GT ./. chr2 86400712 . A . . LowGQX END=86400886 GT ./. chr2 86406555 . C . . LowGQX END=86406746 GT ./. chr2 86408409 . A . . LowGQX END=86408509 GT ./. chr2 86422433 . A . . LowGQX END=86422533 GT ./. chr2 86426586 . A . . LowGQX END=86426686 GT ./. chr2 86433227 . A . . LowGQX END=86433421 GT ./. chr2 86434264 . T . . LowGQX END=86434453 GT ./. chr2 86437601 . A . . LowGQX END=86437794 GT ./. chr2 86439500 . T . . LowGQX END=86439600 GT ./. chr2 86440712 . T . . LowGQX END=86440812 GT ./. chr2 86444161 . C . . LowGQX END=86444285 GT ./. chr2 86459697 . T . . LowGQX END=86459977 GT ./. chr2 86479029 . C . . LowGQX END=86479245 GT ./. chr2 86481766 . C . . LowGQX END=86481989 GT ./. chr2 86491037 . G . . LowGQX END=86491216 GT ./. chr2 86507055 . A . . LowGQX END=86507215 GT ./. chr2 86509242 . C . . LowGQX END=86509417 GT ./. chr2 86564488 . G . . LowGQX END=86564706 GT ./. chr2 86565123 . G . . LowGQX END=86565223 GT ./. chr2 86669149 . T . . LowGQX END=86669359 GT ./. chr2 86676928 . A . . LowGQX END=86677088 GT ./. chr2 86678224 . A . . LowGQX END=86678339 GT ./. chr2 86682206 . A . . LowGQX END=86682366 GT ./. chr2 86683563 . A . . LowGQX END=86683743 GT ./. chr2 86683915 . A . . LowGQX END=86684015 GT ./. chr2 86684101 . T . . LowGQX END=86684201 GT ./. chr2 86691174 . A . . LowGQX END=86691342 GT ./. chr2 86693493 . A . . LowGQX END=86694009 GT ./. chr2 86697325 . A . . LowGQX END=86697534 GT ./. chr2 86701897 . A . . LowGQX END=86702116 GT ./. chr2 86704998 . A . . LowGQX END=86705194 GT ./. chr2 86705291 . A . . LowGQX END=86705391 GT ./. chr2 86705729 . A . . LowGQX END=86705861 GT ./. chr2 86707278 . T . . LowGQX END=86707488 GT ./. chr2 86709051 . A . . LowGQX END=86709251 GT ./. chr2 86709579 . A . . LowGQX END=86709820 GT ./. chr2 86711108 . A . . LowGQX END=86711284 GT ./. chr2 86712059 . T . . LowGQX END=86712159 GT ./. chr2 86712850 . A . . LowGQX END=86712985 GT ./. chr2 86716439 . A . . LowGQX END=86716563 GT ./. chr2 86716641 . A . . LowGQX END=86716785 GT ./. chr2 86718002 . A . . LowGQX END=86718183 GT ./. chr2 86718262 . A . . LowGQX END=86718401 GT ./. chr2 86719160 . A . . LowGQX END=86719265 GT ./. chr2 86732925 . C . . LowGQX END=86733075 GT ./. chr2 86734600 . A . . LowGQX END=86734719 GT ./. chr2 86737479 . A . . LowGQX END=86737605 GT ./. chr2 86756339 . A . . LowGQX END=86756523 GT ./. chr2 86769303 . A . . LowGQX END=86769456 GT ./. chr2 86790400 . C . . LowGQX END=86790500 GT ./. chr2 86830964 . G . . LowGQX END=86832544 GT ./. chr2 86839280 . A . . LowGQX END=86839400 GT ./. chr2 86845085 . C . . LowGQX END=86845185 GT ./. chr2 86847451 . A . . LowGQX END=86847595 GT ./. chr2 86849782 . G . . LowGQX END=86850012 GT ./. chr2 86850852 . C . . LowGQX END=86851012 GT ./. chr2 86947789 . G . . LowGQX END=86947935 GT ./. chr2 86968048 . A . . LowGQX END=86968227 GT ./. chr2 86979017 . A . . LowGQX END=86979156 GT ./. chr2 86980579 . A . . LowGQX END=86980684 GT ./. chr2 86992148 . A . . LowGQX END=86992319 GT ./. chr2 86992980 . A . . LowGQX END=86993150 GT ./. chr2 86997144 . A . . LowGQX END=86997304 GT ./. chr2 86998679 . A . . LowGQX END=86998838 GT ./. chr2 87000453 . T . . LowGQX END=87000553 GT ./. chr2 87011727 . A . . LowGQX END=87013146 GT ./. chr2 87015602 . C . . LowGQX END=87015735 GT ./. chr2 87016395 . A . . LowGQX END=87016608 GT ./. chr2 87016712 . G . . LowGQX END=87016925 GT ./. chr2 87017400 . A . . LowGQX END=87018219 GT ./. chr2 87018632 . C . . LowGQX END=87018838 GT ./. chr2 87042728 . G . . LowGQX END=87042846 GT ./. chr2 87048810 . T . . LowGQX END=87048910 GT ./. chr2 87049425 . G . . LowGQX END=87049525 GT ./. chr2 87060024 . C . . LowGQX END=87060184 GT ./. chr2 87069387 . C . . LowGQX END=87069487 GT ./. chr2 87071711 . T . . LowGQX END=87071811 GT ./. chr2 87072012 . G . . LowGQX END=87072112 GT ./. chr2 87073802 . C . . LowGQX END=87073954 GT ./. chr2 87080048 . A . . LowGQX END=87080267 GT ./. chr2 87085178 . A . . LowGQX END=87085542 GT ./. chr2 87088918 . T . . LowGQX END=87089084 GT ./. chr2 87092408 . T . . LowGQX END=87092568 GT ./. chr2 87092761 . A . . LowGQX END=87092861 GT ./. chr2 87135006 . A . . LowGQX END=87135166 GT ./. chr2 87140902 . T . . LowGQX END=87141059 GT ./. chr2 87144668 . A . . LowGQX END=87144828 GT ./. chr2 87178341 . G . . LowGQX END=87178501 GT ./. chr2 87180013 . T . . LowGQX END=87180177 GT ./. chr2 87180589 . T . . LowGQX END=87180774 GT ./. chr2 87184757 . T . . LowGQX END=87185127 GT ./. chr2 87185363 . C . . LowGQX END=87185551 GT ./. chr2 87190140 . T . . LowGQX END=87190348 GT ./. chr2 87196345 . T . . LowGQX END=87196445 GT ./. chr2 87198798 . C . . LowGQX END=87199148 GT ./. chr2 87201164 . A . . LowGQX END=87201378 GT ./. chr2 87201449 . T . . LowGQX END=87201637 GT ./. chr2 87201762 . T . . LowGQX END=87201928 GT ./. chr2 87202819 . T . . LowGQX END=87203010 GT ./. chr2 87203244 . C . . LowGQX END=87203414 GT ./. chr2 87203644 . C . . LowGQX END=87203823 GT ./. chr2 87204631 . T . . LowGQX END=87204883 GT ./. chr2 87204909 . C . . LowGQX END=87205063 GT ./. chr2 87208154 . G . . LowGQX END=87208324 GT ./. chr2 87211815 . T . . LowGQX END=87211974 GT ./. chr2 87212687 . T . . LowGQX END=87214923 GT ./. chr2 87221963 . G . . LowGQX END=87222162 GT ./. chr2 87224674 . C . . LowGQX END=87224882 GT ./. chr2 87239543 . A . . LowGQX END=87239703 GT ./. chr2 87243373 . G . . LowGQX END=87243584 GT ./. chr2 87244618 . A . . LowGQX END=87244814 GT ./. chr2 87248773 . T . . LowGQX END=87248986 GT ./. chr2 87257916 . A . . LowGQX END=87258076 GT ./. chr2 87258855 . C . . LowGQX END=87259022 GT ./. chr2 87259192 . T . . LowGQX END=87259371 GT ./. chr2 87261271 . T . . LowGQX END=87261424 GT ./. chr2 87264346 . T . . LowGQX END=87264716 GT ./. chr2 87270825 . A . . LowGQX END=87271108 GT ./. chr2 87274260 . T . . LowGQX END=87274430 GT ./. chr2 87276701 . T . . LowGQX END=87276991 GT ./. chr2 87408196 . A . . LowGQX END=87408296 GT ./. chr2 87408555 . T . . LowGQX END=87408709 GT ./. chr2 87410047 . A . . LowGQX END=87410221 GT ./. chr2 87412594 . T . . LowGQX END=87412749 GT ./. chr2 87414268 . A . . LowGQX END=87414419 GT ./. chr2 87415972 . T . . LowGQX END=87416182 GT ./. chr2 87420566 . T . . LowGQX END=87420755 GT ./. chr2 87423586 . A . . LowGQX END=87423753 GT ./. chr2 88019380 . A . . LowGQX END=88019541 GT ./. chr2 88021779 . C . . LowGQX END=88021939 GT ./. chr2 88025445 . T . . LowGQX END=88025735 GT ./. chr2 88031835 . T . . LowGQX END=88032205 GT ./. chr2 88035132 . G . . LowGQX END=88035289 GT ./. chr2 88037206 . C . . LowGQX END=88037372 GT ./. chr2 88037481 . A . . LowGQX END=88037634 GT ./. chr2 88038431 . A . . LowGQX END=88038591 GT ./. chr2 88045931 . T . . LowGQX END=88046031 GT ./. chr2 88047591 . T . . LowGQX END=88047748 GT ./. chr2 88051764 . A . . LowGQX END=88051953 GT ./. chr2 88053045 . A . . LowGQX END=88053204 GT ./. chr2 88056819 . C . . LowGQX END=88056979 GT ./. chr2 88071686 . A . . LowGQX END=88071895 GT ./. chr2 88074390 . T . . LowGQX END=88074605 GT ./. chr2 88081630 . A . . LowGQX END=88083869 GT ./. chr2 88084531 . G . . LowGQX END=88084692 GT ./. chr2 88088198 . A . . LowGQX END=88088361 GT ./. chr2 88091446 . A . . LowGQX END=88091601 GT ./. chr2 88091668 . C . . LowGQX END=88091861 GT ./. chr2 88092709 . T . . LowGQX END=88092888 GT ./. chr2 88093149 . C . . LowGQX END=88093328 GT ./. chr2 88093553 . C . . LowGQX END=88093752 GT ./. chr2 88094635 . C . . LowGQX END=88094804 GT ./. chr2 88094915 . T . . LowGQX END=88095103 GT ./. chr2 88095174 . A . . LowGQX END=88095385 GT ./. chr2 88097412 . C . . LowGQX END=88097762 GT ./. chr2 88100062 . G . . LowGQX END=88100218 GT ./. chr2 88106203 . T . . LowGQX END=88106411 GT ./. chr2 88111003 . C . . LowGQX END=88111182 GT ./. chr2 88111423 . G . . LowGQX END=88111793 GT ./. chr2 88115787 . C . . LowGQX END=88115976 GT ./. chr2 88116384 . C . . LowGQX END=88116543 GT ./. chr2 88118060 . G . . LowGQX END=88118160 GT ./. chr2 88125106 . C . . LowGQX END=88125263 GT ./. chr2 88285220 . T . . LowGQX END=88285320 GT ./. chr2 88327301 . C . . LowGQX END=88328085 GT ./. chr2 88367382 . A . . LowGQX END=88367523 GT ./. chr2 88383833 . A . . LowGQX END=88384014 GT ./. chr2 88387379 . A . . LowGQX END=88387597 GT ./. chr2 88390529 . A . . LowGQX END=88390664 GT ./. chr2 88393006 . T . . LowGQX END=88393106 GT ./. chr2 88396112 . A . . LowGQX END=88396306 GT ./. chr2 88402574 . C . . LowGQX END=88402674 GT ./. chr2 88405842 . A . . LowGQX END=88406010 GT ./. chr2 88407888 . A . . LowGQX END=88408061 GT ./. chr2 88409871 . A . . LowGQX END=88410034 GT ./. chr2 88411580 . C . . LowGQX END=88411680 GT ./. chr2 88422549 . A . . LowGQX END=88422649 GT ./. chr2 88423970 . C . . LowGQX END=88424150 GT ./. chr2 88425693 . A . . LowGQX END=88425870 GT ./. chr2 88427454 . T . . LowGQX END=88427554 GT ./. chr2 88470775 . C . . LowGQX END=88470875 GT ./. chr2 88472668 . T . . LowGQX END=88472895 GT ./. chr2 88474156 . A . . LowGQX END=88474355 GT ./. chr2 88474766 . A . . LowGQX END=88474932 GT ./. chr2 88478300 . A . . LowGQX END=88478535 GT ./. chr2 88482216 . A . . LowGQX END=88482369 GT ./. chr2 88482465 . A . . LowGQX END=88482595 GT ./. chr2 88484845 . A . . LowGQX END=88485001 GT ./. chr2 88485069 . G . . LowGQX END=88485211 GT ./. chr2 88485415 . A . . LowGQX END=88485645 GT ./. chr2 88747725 . T . . LowGQX END=88748349 GT ./. chr2 88751404 . G . . LowGQX END=88752063 GT ./. chr2 88825127 . G . . LowGQX END=88825227 GT ./. chr2 88825920 . T . . LowGQX END=88826020 GT ./. chr2 88828568 . A . . LowGQX END=88828995 GT ./. chr2 88857203 . A . . LowGQX END=88857506 GT ./. chr2 88858384 . T . . LowGQX END=88858549 GT ./. chr2 88861756 . T . . LowGQX END=88861960 GT ./. chr2 88870341 . C . . LowGQX END=88870611 GT ./. chr2 88874133 . T . . LowGQX END=88875016 GT ./. chr2 88876021 . A . . LowGQX END=88876263 GT ./. chr2 88878985 . A . . LowGQX END=88879210 GT ./. chr2 88882897 . T . . LowGQX END=88883112 GT ./. chr2 88885308 . A . . LowGQX END=88885631 GT ./. chr2 88887449 . T . . LowGQX END=88887674 GT ./. chr2 88888228 . A . . LowGQX END=88888471 GT ./. chr2 88889910 . A . . LowGQX END=88890175 GT ./. chr2 88890285 . C . . LowGQX END=88890622 GT ./. chr2 88892739 . A . . LowGQX END=88892975 GT ./. chr2 88894936 . T . . LowGQX END=88895233 GT ./. chr2 88895257 . G . . LowGQX END=88895357 GT ./. chr2 88913191 . T . . LowGQX END=88913423 GT ./. chr2 88926434 . G . . LowGQX END=88926844 GT ./. chr2 88991106 . A . . LowGQX END=88991553 GT ./. chr2 88997951 . G . . LowGQX END=88998114 GT ./. chr2 88999465 . T . . LowGQX END=88999634 GT ./. chr2 89028745 . T . . LowGQX END=89028907 GT ./. chr2 89034018 . C . . LowGQX END=89034185 GT ./. chr2 89035135 . C . . LowGQX END=89035306 GT ./. chr2 89036001 . T . . LowGQX END=89036245 GT ./. chr2 89037443 . T . . LowGQX END=89037645 GT ./. chr2 89049447 . T . . LowGQX END=89049647 GT ./. chr2 89156862 . G . . LowGQX END=89157197 GT ./. chr2 89160049 . T . . LowGQX END=89160149 GT ./. chr2 89160367 . A . . LowGQX END=89160467 GT ./. chr2 89160702 . T . . LowGQX END=89160802 GT ./. chr2 89161006 . C . . LowGQX END=89161106 GT ./. chr2 89161367 . A . . LowGQX END=89161467 GT ./. chr2 89185002 . T . . LowGQX END=89185162 GT ./. chr2 89185355 . G . . LowGQX END=89185670 GT ./. chr2 89196785 . A . . LowGQX END=89196885 GT ./. chr2 89197004 . G . . LowGQX END=89197301 GT ./. chr2 89246818 . G . . LowGQX END=89247115 GT ./. chr2 89247217 . T . . LowGQX END=89247317 GT ./. chr2 89265780 . G . . LowGQX END=89266077 GT ./. chr2 89266180 . C . . LowGQX END=89266280 GT ./. chr2 89277986 . G . . LowGQX END=89278295 GT ./. chr2 89278429 . G . . LowGQX END=89278529 GT ./. chr2 89291927 . G . . LowGQX END=89292224 GT ./. chr2 89292323 . A . . LowGQX END=89292423 GT ./. chr2 89309478 . G . . LowGQX END=89309775 GT ./. chr2 89309877 . T . . LowGQX END=89309977 GT ./. chr2 89326667 . G . . LowGQX END=89326964 GT ./. chr2 89327107 . G . . LowGQX END=89327207 GT ./. chr2 89339679 . T . . LowGQX END=89340218 GT ./. chr2 89345426 . C . . LowGQX END=89345846 GT ./. chr2 89345887 . T . . LowGQX END=89345987 GT ./. chr2 89384661 . A . . LowGQX END=89384971 GT ./. chr2 89385112 . G . . LowGQX END=89385212 GT ./. chr2 89399351 . G . . LowGQX END=89399648 GT ./. chr2 89399682 . A . . LowGQX END=89399850 GT ./. chr2 89416821 . T . . LowGQX END=89417129 GT ./. chr2 89417231 . C . . LowGQX END=89417331 GT ./. chr2 89442056 . G . . LowGQX END=89442356 GT ./. chr2 89442517 . G . . LowGQX END=89442617 GT ./. chr2 89459234 . G . . LowGQX END=89459531 GT ./. chr2 89459714 . C . . LowGQX END=89459814 GT ./. chr2 89475811 . G . . LowGQX END=89476123 GT ./. chr2 89476540 . C . . LowGQX END=89476640 GT ./. chr2 89512907 . G . . LowGQX END=89513204 GT ./. chr2 89513305 . A . . LowGQX END=89513405 GT ./. chr2 89521167 . T . . LowGQX END=89521497 GT ./. chr2 89521838 . C . . LowGQX END=89521938 GT ./. chr2 89533686 . T . . LowGQX END=89533966 GT ./. chr2 89544252 . T . . LowGQX END=89544582 GT ./. chr2 89544975 . C . . LowGQX END=89545075 GT ./. chr2 89567746 . T . . LowGQX END=89568054 GT ./. chr2 89568155 . T . . LowGQX END=89568255 GT ./. chr2 89597009 . T . . LowGQX END=89597317 GT ./. chr2 89597358 . C . . LowGQX END=89597518 GT ./. chr2 89619371 . T . . LowGQX END=89619681 GT ./. chr2 89619780 . T . . LowGQX END=89619880 GT ./. chr2 89629861 . T . . LowGQX END=89630191 GT ./. chr2 89890559 . C . . LowGQX END=89890659 GT ./. chr2 89890976 . T . . LowGQX END=89891316 GT ./. chr2 89901232 . C . . LowGQX END=89901392 GT ./. chr2 89901482 . T . . LowGQX END=89901812 GT ./. chr2 89901835 . G . . LowGQX END=89901995 GT ./. chr2 89911335 . A . . LowGQX END=89911495 GT ./. chr2 89923467 . C . . LowGQX END=89923627 GT ./. chr2 89923717 . T . . LowGQX END=89924027 GT ./. chr2 89952858 . G . . LowGQX END=89952958 GT ./. chr2 89953048 . T . . LowGQX END=89953358 GT ./. chr2 89975678 . A . . LowGQX END=89975778 GT ./. chr2 89976167 . T . . LowGQX END=89976517 GT ./. chr2 89986326 . A . . LowGQX END=89986426 GT ./. chr2 89986768 . G . . LowGQX END=89987082 GT ./. chr2 89998799 . A . . LowGQX END=89998899 GT ./. chr2 89999236 . T . . LowGQX END=89999565 GT ./. chr2 90007671 . G . . LowGQX END=90007771 GT ./. chr2 90007857 . G . . LowGQX END=90008155 GT ./. chr2 90024681 . C . . LowGQX END=90024836 GT ./. chr2 90025201 . G . . LowGQX END=90025513 GT ./. chr2 90043556 . C . . LowGQX END=90043711 GT ./. chr2 90044128 . G . . LowGQX END=90044440 GT ./. chr2 90060415 . G . . LowGQX END=90060593 GT ./. chr2 90060699 . G . . LowGQX END=90061002 GT ./. chr2 90077751 . T . . LowGQX END=90077851 GT ./. chr2 90078012 . G . . LowGQX END=90078312 GT ./. chr2 90108504 . A . . LowGQX END=90108604 GT ./. chr2 90108784 . G . . LowGQX END=90109083 GT ./. chr2 90121635 . A . . LowGQX END=90121735 GT ./. chr2 90121837 . G . . LowGQX END=90122134 GT ./. chr2 90139082 . A . . LowGQX END=90139182 GT ./. chr2 90139284 . G . . LowGQX END=90139581 GT ./. chr2 90153719 . T . . LowGQX END=90153819 GT ./. chr2 90153951 . T . . LowGQX END=90154261 GT ./. chr2 90192925 . G . . LowGQX END=90193025 GT ./. chr2 90193117 . T . . LowGQX END=90193427 GT ./. chr2 90198633 . C . . LowGQX END=90198793 GT ./. chr2 90198887 . A . . LowGQX END=90199191 GT ./. chr2 90211714 . T . . LowGQX END=90211814 GT ./. chr2 90211957 . G . . LowGQX END=90212254 GT ./. chr2 90229042 . G . . LowGQX END=90229142 GT ./. chr2 90229235 . G . . LowGQX END=90229532 GT ./. chr2 90248897 . G . . LowGQX END=90248997 GT ./. chr2 90249099 . G . . LowGQX END=90249402 GT ./. chr2 90259751 . G . . LowGQX END=90259851 GT ./. chr2 90259952 . G . . LowGQX END=90260249 GT ./. chr2 90273623 . C . . LowGQX END=90273783 GT ./. chr2 90273925 . T . . LowGQX END=90274245 GT ./. chr2 90537787 . A . . LowGQX END=90538147 GT ./. chr2 90538229 . G . . LowGQX END=90538389 GT ./. chr2 92129210 . A . . LowGQX END=92129792 GT ./. chr2 92222512 . T . . LowGQX END=92222852 GT ./. chr2 92222909 . G . . LowGQX END=92223060 GT ./. chr2 92231099 . C . . LowGQX END=92231453 GT ./. chr2 92231726 . G . . LowGQX END=92231899 GT ./. chr2 95480776 . T . . LowGQX END=95481751 GT ./. chr2 95482918 . C . . LowGQX END=95483155 GT ./. chr2 95537323 . C . . LowGQX END=95537825 GT ./. chr2 95538561 . G . . LowGQX END=95538742 GT ./. chr2 95539251 . G . . LowGQX END=95539351 GT ./. chr2 95539708 . A . . LowGQX END=95539856 GT ./. chr2 95540519 . A . . LowGQX END=95540746 GT ./. chr2 95541331 . A . . LowGQX END=95541490 GT ./. chr2 95542296 . A . . LowGQX END=95542517 GT ./. chr2 95691535 . G . . LowGQX END=95691635 GT ./. chr2 95713702 . A . . LowGQX END=95713874 GT ./. chr2 95715324 . A . . LowGQX END=95715454 GT ./. chr2 95719114 . T . . LowGQX END=95719214 GT ./. chr2 95753100 . G . . LowGQX END=95753329 GT ./. chr2 95756129 . A . . LowGQX END=95756270 GT ./. chr2 95766201 . T . . LowGQX END=95766301 GT ./. chr2 95766561 . A . . LowGQX END=95766661 GT ./. chr2 95767396 . T . . LowGQX END=95767496 GT ./. chr2 95770269 . T . . LowGQX END=95770478 GT ./. chr2 95772136 . G . . LowGQX END=95772236 GT ./. chr2 95773918 . A . . LowGQX END=95774156 GT ./. chr2 95775659 . A . . LowGQX END=95775789 GT ./. chr2 95780809 . A . . LowGQX END=95780951 GT ./. chr2 95783548 . C . . LowGQX END=95783701 GT ./. chr2 95787398 . G . . LowGQX END=95787558 GT ./. chr2 95815025 . A . . LowGQX END=95816015 GT ./. chr2 95818417 . A . . LowGQX END=95818517 GT ./. chr2 95818876 . A . . LowGQX END=95819005 GT ./. chr2 95823091 . C . . LowGQX END=95823191 GT ./. chr2 95824605 . C . . LowGQX END=95824729 GT ./. chr2 95830747 . A . . LowGQX END=95830847 GT ./. chr2 95841879 . C . . LowGQX END=95842039 GT ./. chr2 95843226 . A . . LowGQX END=95843357 GT ./. chr2 95845902 . A . . LowGQX END=95846020 GT ./. chr2 95846808 . G . . LowGQX END=95847857 GT ./. chr2 95940332 . C . . LowGQX END=95940580 GT ./. chr2 95941184 . T . . LowGQX END=95941284 GT ./. chr2 95941617 . G . . LowGQX END=95941668 GT ./. chr2 95941669 . C . . LowGQX END=95941675;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 95941676 . A G 11.01 LowGQX;LowGQ DP=1;Dels=0.00;FS=0.000;HRun=2;HaplotypeScore=0.0000;MQ=60;MQ0=0;QD=11.01;SB=-0.01;TI=NM_001165978,NM_001165977,NM_144707;GI=PROM2,PROM2,PROM2;FC=Silent,Silent,Silent GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,1:1:3.01:41,3,0:60:3:1.000 chr2 95941677 . G . . LowGQX END=95941701;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 95941702 . G . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr2 95941703 . T . . LowGQX END=95941715;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 95941716 . G . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr2 95941717 . A . . LowGQX END=95941722;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 95941723 . G T 3.07 LowGQX BaseQRankSum=0.804;DP=2;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;MQ=60;MQ0=0;MQRankSum=0.804;QD=1.53;ReadPosRankSum=0.804;SB=-0.01;TI=NM_001165978,NM_001165977,NM_144707;GI=PROM2,PROM2,PROM2;FC=Missense_G114C,Missense_G114C,Missense_G114C;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:1,1:2:30.11:30,0,33:60:3:0.500 chr2 95941724 . G . . LowGQX END=95941751;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 95941752 . C . 36.01 LowGQX DP=3;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:2:3:6.02:60:6 chr2 95941753 . G . . LowGQX END=95941770;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:3:60 chr2 95941771 . T . 33.01 LowGQX DP=3;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:2:3:3.01:60:3 chr2 95941772 . G . . LowGQX . GT:DP:GQX:MQ 0/0:3:6:60 chr2 95941773 . C . 36.01 LowGQX DP=3;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:2:3:6.02:60:6 chr2 95941774 . C . . LowGQX END=95941806;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:6:60 chr2 95941807 . A . 36.01 LowGQX DP=4;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:3:4:6.02:60:6 chr2 95941808 . C . . LowGQX END=95941813;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:6:60 chr2 95941814 . A . 13.51 LowGQX DP=3;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:2:3:0.09:60:0 chr2 95941815 . C . . LowGQX END=95941883;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 95941973 . A . . LowGQX . GT ./. chr2 95941974 . G . . LowGQX END=95942012;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 95942013 . C . . LowGQX END=95942098;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:6:9:60 chr2 95942324 . G . . LowGQX END=95942424 GT ./. chr2 95942655 . A . . LowGQX END=95942815 GT ./. chr2 95943110 . A . . LowGQX END=95943317 GT ./. chr2 95943606 . C . . LowGQX END=95943766 GT ./. chr2 95944451 . A . . LowGQX END=95944551 GT ./. chr2 95944731 . A . . LowGQX END=95944895 GT ./. chr2 95945591 . A . . LowGQX END=95945748 GT ./. chr2 95946988 . A . . LowGQX END=95947116 GT ./. chr2 95947669 . C . . LowGQX END=95947769 GT ./. chr2 95947883 . T . . LowGQX END=95947983 GT ./. chr2 95950715 . A . . LowGQX END=95950866 GT ./. chr2 95951373 . C . . LowGQX END=95951473 GT ./. chr2 95952224 . C . . LowGQX END=95952324 GT ./. chr2 95952529 . C . . LowGQX END=95952629 GT ./. chr2 95952872 . C . . LowGQX END=95952972 GT ./. chr2 95953129 . C . . LowGQX END=95953229 GT ./. chr2 95953954 . C . . LowGQX END=95954054 GT ./. chr2 95954229 . A . . LowGQX END=95954340 GT ./. chr2 95954663 . C . . LowGQX END=95954763 GT ./. chr2 95963085 . G . . LowGQX END=95963245 GT ./. chr2 95975927 . T . . LowGQX END=95976027 GT ./. chr2 95976101 . A . . LowGQX END=95976463 GT ./. chr2 96012766 . C . . LowGQX END=96012873 GT ./. chr2 96040042 . A . . LowGQX END=96040171 GT ./. chr2 96040581 . G . . LowGQX END=96040681 GT ./. chr2 96040872 . C . . LowGQX END=96040972 GT ./. chr2 96047342 . A . . LowGQX END=96047454 GT ./. chr2 96048123 . A . . LowGQX END=96048232 GT ./. chr2 96048962 . G . . LowGQX END=96049062 GT ./. chr2 96049724 . A . . LowGQX END=96049824 GT ./. chr2 96071305 . T . . LowGQX END=96071554 GT ./. chr2 96072687 . A . . LowGQX END=96072908 GT ./. chr2 96076255 . G . . LowGQX END=96076355 GT ./. chr2 96076610 . A . . LowGQX END=96076777 GT ./. chr2 96078180 . A . . LowGQX END=96078293 GT ./. chr2 96078419 . A . . LowGQX END=96078519 GT ./. chr2 96078625 . T . . LowGQX END=96078725 GT ./. chr2 96142911 . A . . LowGQX END=96143400 GT ./. chr2 96144456 . A . . LowGQX END=96144607 GT ./. chr2 96145035 . A . . LowGQX END=96145195 GT ./. chr2 96146052 . C . . LowGQX END=96146284 GT ./. chr2 96147341 . A . . LowGQX END=96147441 GT ./. chr2 96148040 . G . . LowGQX END=96148470 GT ./. chr2 96194892 . C . . LowGQX END=96195433 GT ./. chr2 96259770 . A . . LowGQX END=96260185 GT ./. chr2 96260796 . A . . LowGQX END=96260896 GT ./. chr2 96261917 . G . . LowGQX END=96262183 GT ./. chr2 96262979 . C . . LowGQX END=96263139 GT ./. chr2 96263575 . T . . LowGQX END=96263728 GT ./. chr2 96264827 . C . . LowGQX END=96265324 GT ./. chr2 96514545 . A . . LowGQX END=96514645 GT ./. chr2 96516882 . T . . LowGQX END=96516982 GT ./. chr2 96517376 . T . . LowGQX END=96517536 GT ./. chr2 96517859 . T . . LowGQX END=96517959 GT ./. chr2 96519456 . C . . LowGQX END=96519610 GT ./. chr2 96521013 . C . . LowGQX END=96521929 GT ./. chr2 96523056 . C . . LowGQX END=96523254 GT ./. chr2 96525608 . C . . LowGQX END=96525823 GT ./. chr2 96533156 . T . . LowGQX END=96533330 GT ./. chr2 96541670 . T . . LowGQX END=96541770 GT ./. chr2 96542111 . C . . LowGQX END=96542270 GT ./. chr2 96546161 . A . . LowGQX END=96546261 GT ./. chr2 96546307 . G . . LowGQX END=96546407 GT ./. chr2 96548036 . T . . LowGQX END=96548136 GT ./. chr2 96548181 . A . . LowGQX END=96548281 GT ./. chr2 96549907 . T . . LowGQX END=96550007 GT ./. chr2 96550052 . A . . LowGQX END=96550152 GT ./. chr2 96551782 . G . . LowGQX END=96551882 GT ./. chr2 96551928 . G . . LowGQX END=96552028 GT ./. chr2 96553659 . T . . LowGQX END=96553759 GT ./. chr2 96553804 . G . . LowGQX END=96553904 GT ./. chr2 96555533 . G . . LowGQX END=96555778 GT ./. chr2 96557342 . G . . LowGQX END=96557499 GT ./. chr2 96557544 . T . . LowGQX END=96557644 GT ./. chr2 96559267 . G . . LowGQX END=96559367 GT ./. chr2 96559408 . T . . LowGQX END=96559508 GT ./. chr2 96561133 . T . . LowGQX END=96561233 GT ./. chr2 96561274 . T . . LowGQX END=96561374 GT ./. chr2 96562947 . G . . LowGQX END=96563104 GT ./. chr2 96563149 . T . . LowGQX END=96563249 GT ./. chr2 96564819 . G . . LowGQX END=96565120 GT ./. chr2 96566689 . C . . LowGQX END=96566990 GT ./. chr2 96570435 . G . . LowGQX END=96570736 GT ./. chr2 96572305 . C . . LowGQX END=96572610 GT ./. chr2 96572614 . A . . LowGQX END=96572714 GT ./. chr2 96574251 . T . . LowGQX END=96574481 GT ./. chr2 96576050 . G . . LowGQX END=96576207 GT ./. chr2 96576252 . T . . LowGQX END=96576352 GT ./. chr2 96577978 . T . . LowGQX END=96578078 GT ./. chr2 96578119 . T . . LowGQX END=96578219 GT ./. chr2 96579785 . G . . LowGQX END=96580087 GT ./. chr2 96581714 . T . . LowGQX END=96581814 GT ./. chr2 96581855 . T . . LowGQX END=96581955 GT ./. chr2 96583589 . T . . LowGQX END=96583689 GT ./. chr2 96583726 . T . . LowGQX END=96583826 GT ./. chr2 96587284 . A . . LowGQX END=96587594 GT ./. chr2 96589229 . T . . LowGQX END=96589473 GT ./. chr2 96591086 . T . . LowGQX END=96591186 GT ./. chr2 96591231 . A . . LowGQX END=96591331 GT ./. chr2 96592891 . T . . LowGQX END=96593048 GT ./. chr2 96593093 . G . . LowGQX END=96593193 GT ./. chr2 96594749 . A . . LowGQX END=96594906 GT ./. chr2 96594951 . G . . LowGQX END=96595051 GT ./. chr2 96601188 . A . . LowGQX END=96601288 GT ./. chr2 96601328 . A . . LowGQX END=96601428 GT ./. chr2 96604563 . A . . LowGQX END=96604663 GT ./. chr2 96604699 . G . . LowGQX END=96604799 GT ./. chr2 96606878 . C . . LowGQX END=96606978 GT ./. chr2 96610359 . C . . LowGQX END=96610459 GT ./. chr2 96610842 . T . . LowGQX END=96610942 GT ./. chr2 96614261 . A . . LowGQX END=96614361 GT ./. chr2 96616462 . T . . LowGQX END=96616562 GT ./. chr2 96617025 . C . . LowGQX END=96617176 GT ./. chr2 96619616 . G . . LowGQX END=96619770 GT ./. chr2 96622499 . T . . LowGQX END=96622599 GT ./. chr2 96624325 . T . . LowGQX END=96624425 GT ./. chr2 96624469 . A . . LowGQX END=96624569 GT ./. chr2 96626150 . A . . LowGQX END=96626451 GT ./. chr2 96628029 . G . . LowGQX END=96628186 GT ./. chr2 96628231 . G . . LowGQX END=96628331 GT ./. chr2 96643799 . A . . LowGQX END=96643954 GT ./. chr2 96646395 . C . . LowGQX END=96646534 GT ./. chr2 96648003 . C . . LowGQX END=96648163 GT ./. chr2 96652498 . C . . LowGQX END=96652673 GT ./. chr2 96652839 . C . . LowGQX END=96652955 GT ./. chr2 96657259 . C . . LowGQX END=96657457 GT ./. chr2 96687855 . A . . LowGQX END=96688026 GT ./. chr2 96688394 . T . . LowGQX END=96688494 GT ./. chr2 96688689 . G . . LowGQX END=96688789 GT ./. chr2 96688852 . A . . LowGQX END=96688977 GT ./. chr2 96689055 . A . . LowGQX END=96689191 GT ./. chr2 96689660 . G . . LowGQX END=96689760 GT ./. chr2 96689935 . A . . LowGQX END=96690088 GT ./. chr2 96690173 . A . . LowGQX END=96690434 GT ./. chr2 96690507 . A . . LowGQX END=96690607 GT ./. chr2 96691231 . A . . LowGQX END=96691411 GT ./. chr2 96691670 . G . . LowGQX END=96691770 GT ./. chr2 96691929 . A . . LowGQX END=96692056 GT ./. chr2 96692372 . C . . LowGQX END=96692722 GT ./. chr2 96692753 . A . . LowGQX END=96692912 GT ./. chr2 96693154 . A . . LowGQX END=96693514 GT ./. chr2 96693686 . G . . LowGQX END=96693841 GT ./. chr2 96696121 . A . . LowGQX END=96696285 GT ./. chr2 96696439 . T . . LowGQX END=96696599 GT ./. chr2 96696936 . A . . LowGQX END=96697096 GT ./. chr2 96697779 . A . . LowGQX END=96697948 GT ./. chr2 96698027 . T . . LowGQX END=96698127 GT ./. chr2 96780544 . C . . LowGQX END=96781890 GT ./. chr2 96789587 . G . . LowGQX END=96790013 GT ./. chr2 96795561 . A . . LowGQX END=96795720 GT ./. chr2 96795794 . G . . LowGQX END=96795894 GT ./. chr2 96798277 . A . . LowGQX END=96798463 GT ./. chr2 96799162 . A . . LowGQX END=96799284 GT ./. chr2 96799701 . C . . LowGQX END=96799801 GT ./. chr2 96801071 . C . . LowGQX END=96801171 GT ./. chr2 96803312 . A . . LowGQX END=96803442 GT ./. chr2 96804099 . G . . LowGQX END=96804199 GT ./. chr2 96809560 . C . . LowGQX END=96809779 GT ./. chr2 96809891 . A . . LowGQX END=96810115 GT ./. chr2 96810448 . C . . LowGQX END=96810624 GT ./. chr2 96810693 . C . . LowGQX END=96811103 GT ./. chr2 96852467 . G . . LowGQX END=96852653 GT ./. chr2 96852947 . T . . LowGQX END=96853047 GT ./. chr2 96858106 . C . . LowGQX END=96858207 GT ./. chr2 96858807 . C . . LowGQX END=96858907 GT ./. chr2 96858979 . C . . LowGQX END=96859091 GT ./. chr2 96860671 . A . . LowGQX END=96860771 GT ./. chr2 96861078 . C . . LowGQX END=96861288 GT ./. chr2 96873882 . C . . LowGQX END=96874173 GT ./. chr2 96906062 . A . . LowGQX END=96906427 GT ./. chr2 96907566 . A . . LowGQX END=96907666 GT ./. chr2 96919495 . A . . LowGQX END=96919905 GT ./. chr2 96920520 . C . . LowGQX END=96920787 GT ./. chr2 96930825 . C . . LowGQX END=96931171 GT ./. chr2 96932087 . A . . LowGQX END=96932230 GT ./. chr2 96933057 . A . . LowGQX END=96933210 GT ./. chr2 96933361 . A . . LowGQX END=96933477 GT ./. chr2 96933569 . C . . LowGQX END=96933669 GT ./. chr2 96934193 . A . . LowGQX END=96934399 GT ./. chr2 96935000 . T . . LowGQX END=96935100 GT ./. chr2 96936847 . A . . LowGQX END=96937092 GT ./. chr2 96940699 . T . . LowGQX END=96941139 GT ./. chr2 96942398 . T . . LowGQX END=96942498 GT ./. chr2 96942591 . C . . LowGQX END=96943031 GT ./. chr2 96943226 . C . . LowGQX END=96943740 GT ./. chr2 96943924 . A . . LowGQX END=96944148 GT ./. chr2 96944234 . C . . LowGQX END=96944788 GT ./. chr2 96945138 . A . . LowGQX END=96945349 GT ./. chr2 96947501 . T . . LowGQX END=96947712 GT ./. chr2 96948875 . C . . LowGQX END=96949142 GT ./. chr2 96949222 . G . . LowGQX END=96949794 GT ./. chr2 96950045 . G . . LowGQX END=96950375 GT ./. chr2 96950729 . C . . LowGQX END=96950829 GT ./. chr2 96950867 . A . . LowGQX END=96951130 GT ./. chr2 96951998 . C . . LowGQX END=96952274 GT ./. chr2 96952375 . T . . LowGQX END=96952667 GT ./. chr2 96952693 . A . . LowGQX END=96952950 GT ./. chr2 96953126 . C . . LowGQX END=96953347 GT ./. chr2 96953550 . G . . LowGQX END=96953759 GT ./. chr2 96954350 . A . . LowGQX END=96954536 GT ./. chr2 96954724 . G . . LowGQX END=96954907 GT ./. chr2 96954914 . A . . LowGQX END=96955169 GT ./. chr2 96955486 . G . . LowGQX END=96955786 GT ./. chr2 96956013 . C . . LowGQX END=96956304 GT ./. chr2 96956371 . T . . LowGQX END=96956605 GT ./. chr2 96957079 . T . . LowGQX END=96957292 GT ./. chr2 96957438 . T . . LowGQX END=96957467;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 96957468 . A . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr2 96957469 . C . . LowGQX END=96957587;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 96957588 . G . . LowGQX END=96957690 GT ./. chr2 96958659 . C . . LowGQX END=96958885 GT ./. chr2 96959003 . A . . LowGQX END=96959299 GT ./. chr2 96961175 . A . . LowGQX END=96961448 GT ./. chr2 96962223 . A . . LowGQX END=96962481 GT ./. chr2 96962620 . G . . LowGQX END=96962860 GT ./. chr2 96963050 . C . . LowGQX END=96963510 GT ./. chr2 96963971 . C . . LowGQX END=96964210 GT ./. chr2 96964290 . A . . LowGQX END=96964492 GT ./. chr2 96964502 . C . . LowGQX END=96964757 GT ./. chr2 96965016 . T . . LowGQX END=96965217 GT ./. chr2 96966685 . A . . LowGQX END=96966843 GT ./. chr2 96967211 . G . . LowGQX END=96967506 GT ./. chr2 96968846 . G . . LowGQX END=96969120 GT ./. chr2 96970392 . G . . LowGQX END=96970658 GT ./. chr2 96971080 . C . . LowGQX END=96971227 GT ./. chr2 96991533 . A . . LowGQX END=96991633 GT ./. chr2 96991942 . A . . LowGQX END=96992047 GT ./. chr2 96992344 . A . . LowGQX END=96994040 GT ./. chr2 97001468 . G . . LowGQX END=97001628 GT ./. chr2 97007378 . A . . LowGQX END=97007635 GT ./. chr2 97007784 . T . . LowGQX END=97007884 GT ./. chr2 97008491 . C . . LowGQX END=97008591 GT ./. chr2 97008902 . A . . LowGQX END=97009045 GT ./. chr2 97009841 . A . . LowGQX END=97009970 GT ./. chr2 97017567 . A . . LowGQX END=97017761 GT ./. chr2 97019042 . A . . LowGQX END=97019142 GT ./. chr2 97019919 . A . . LowGQX END=97020129 GT ./. chr2 97024781 . A . . LowGQX END=97024940 GT ./. chr2 97025819 . T . . LowGQX END=97025990 GT ./. chr2 97026324 . A . . LowGQX END=97026451 GT ./. chr2 97030217 . A . . LowGQX END=97030332 GT ./. chr2 97031612 . A . . LowGQX END=97031799 GT ./. chr2 97032993 . A . . LowGQX END=97033114 GT ./. chr2 97034706 . T . . LowGQX END=97034806 GT ./. chr2 97035151 . C . . LowGQX END=97035251 GT ./. chr2 97039010 . A . . LowGQX END=97039110 GT ./. chr2 97163981 . T . . LowGQX END=97164184 GT ./. chr2 97165101 . G . . LowGQX END=97165201 GT ./. chr2 97166015 . C . . LowGQX END=97166662 GT ./. chr2 97170960 . G . . LowGQX END=97171060 GT ./. chr2 97202456 . G . . LowGQX END=97202616 GT ./. chr2 97213137 . A . . LowGQX END=97213257 GT ./. chr2 97215056 . A . . LowGQX END=97215236 GT ./. chr2 97215407 . C . . LowGQX END=97215567 GT ./. chr2 97215752 . G . . LowGQX END=97216025 GT ./. chr2 97216309 . A . . LowGQX END=97216473 GT ./. chr2 97216834 . A . . LowGQX END=97218367 GT ./. chr2 97258964 . C . . LowGQX END=97259064 GT ./. chr2 97261308 . C . . LowGQX END=97261408 GT ./. chr2 97267317 . T . . LowGQX END=97267514 GT ./. chr2 97267782 . C . . LowGQX END=97268142 GT ./. chr2 97268489 . C . . LowGQX END=97268648 GT ./. chr2 97269986 . C . . LowGQX END=97270118 GT ./. chr2 97270508 . A . . LowGQX END=97270608 GT ./. chr2 97271056 . C . . LowGQX END=97271249 GT ./. chr2 97272696 . G . . LowGQX END=97272796 GT ./. chr2 97274244 . C . . LowGQX END=97274402 GT ./. chr2 97274600 . C . . LowGQX END=97274802 GT ./. chr2 97275218 . C . . LowGQX END=97275318 GT ./. chr2 97276462 . C . . LowGQX END=97276621 GT ./. chr2 97276788 . A . . LowGQX END=97276888 GT ./. chr2 97277969 . A . . LowGQX END=97278091 GT ./. chr2 97278198 . C . . LowGQX END=97278301 GT ./. chr2 97278554 . C . . LowGQX END=97278672 GT ./. chr2 97279224 . C . . LowGQX END=97279357 GT ./. chr2 97281220 . G . . LowGQX END=97281320 GT ./. chr2 97285095 . C . . LowGQX END=97285282 GT ./. chr2 97285404 . C . . LowGQX END=97285504 GT ./. chr2 97293619 . T . . LowGQX END=97293719 GT ./. chr2 97293729 . A . . LowGQX END=97293829 GT ./. chr2 97297048 . C . . LowGQX END=97297220 GT ./. chr2 97297231 . T . . LowGQX END=97297331 GT ./. chr2 97302657 . C . . LowGQX END=97302873 GT ./. chr2 97308566 . T . . LowGQX END=97308666 GT ./. chr2 97312114 . G . . LowGQX END=97312214 GT ./. chr2 97312797 . A . . LowGQX END=97312897 GT ./. chr2 97313514 . G . . LowGQX END=97313624 GT ./. chr2 97315337 . G . . LowGQX END=97315437 GT ./. chr2 97315916 . G . . LowGQX END=97316027 GT ./. chr2 97317628 . G . . LowGQX END=97317767 GT ./. chr2 97319306 . C . . LowGQX END=97319458 GT ./. chr2 97325987 . C . . LowGQX END=97326143 GT ./. chr2 97327061 . G . . LowGQX END=97327221 GT ./. chr2 97327404 . G . . LowGQX END=97327529 GT ./. chr2 97327928 . T . . LowGQX END=97328028 GT ./. chr2 97329160 . C . . LowGQX END=97329260 GT ./. chr2 97334460 . C . . LowGQX END=97334560 GT ./. chr2 97334622 . G . . LowGQX END=97334742 GT ./. chr2 97334777 . C . . LowGQX END=97334877 GT ./. chr2 97335855 . G . . LowGQX END=97335985 GT ./. chr2 97338813 . G . . LowGQX END=97338992 GT ./. chr2 97350063 . G . . LowGQX END=97350189 GT ./. chr2 97351015 . T . . LowGQX END=97351167 GT ./. chr2 97351676 . G . . LowGQX END=97351855 GT ./. chr2 97351931 . G . . LowGQX END=97352088 GT ./. chr2 97353552 . G . . LowGQX END=97353685 GT ./. chr2 97354928 . C . . LowGQX END=97355139 GT ./. chr2 97355328 . C . . LowGQX END=97355496 GT ./. chr2 97356222 . A . . LowGQX END=97356322 GT ./. chr2 97356926 . G . . LowGQX END=97357091 GT ./. chr2 97357181 . G . . LowGQX END=97357350 GT ./. chr2 97357459 . G . . LowGQX END=97357701 GT ./. chr2 97357830 . T . . LowGQX END=97357930 GT ./. chr2 97359242 . G . . LowGQX END=97359425 GT ./. chr2 97359647 . G . . LowGQX END=97359810 GT ./. chr2 97360096 . G . . LowGQX END=97360202 GT ./. chr2 97361215 . C . . LowGQX END=97361399 GT ./. chr2 97361478 . G . . LowGQX END=97361642 GT ./. chr2 97361752 . C . . LowGQX END=97361852 GT ./. chr2 97363238 . C . . LowGQX END=97363338 GT ./. chr2 97363396 . G . . LowGQX END=97363499 GT ./. chr2 97363773 . G . . LowGQX END=97363894 GT ./. chr2 97364407 . G . . LowGQX END=97364570 GT ./. chr2 97364778 . C . . LowGQX END=97364878 GT ./. chr2 97365286 . G . . LowGQX END=97365458 GT ./. chr2 97365668 . G . . LowGQX END=97365818 GT ./. chr2 97366068 . G . . LowGQX END=97366209 GT ./. chr2 97367686 . C . . LowGQX END=97367786 GT ./. chr2 97368015 . G . . LowGQX END=97368139 GT ./. chr2 97368336 . G . . LowGQX END=97368479 GT ./. chr2 97368714 . G . . LowGQX END=97368815 GT ./. chr2 97368889 . G . . LowGQX END=97369084 GT ./. chr2 97369259 . G . . LowGQX END=97369370 GT ./. chr2 97369951 . G . . LowGQX END=97370100 GT ./. chr2 97370204 . G . . LowGQX END=97370430 GT ./. chr2 97372991 . G . . LowGQX END=97373138 GT ./. chr2 97373449 . A . . LowGQX END=97373573 GT ./. chr2 97377391 . A . . LowGQX END=97377510 GT ./. chr2 97377599 . A . . LowGQX END=97377765 GT ./. chr2 97378810 . G . . LowGQX END=97378910 GT ./. chr2 97399248 . G . . LowGQX END=97399348 GT ./. chr2 97400144 . A . . LowGQX END=97400266 GT ./. chr2 97402838 . A . . LowGQX END=97402998 GT ./. chr2 97403684 . A . . LowGQX END=97403807 GT ./. chr2 97405569 . C . . LowGQX END=97405780 GT ./. chr2 97426686 . G . . LowGQX END=97428190 GT ./. chr2 97462698 . T . . LowGQX END=97462944 GT ./. chr2 97463199 . C . . LowGQX END=97463436 GT ./. chr2 97464743 . T . . LowGQX END=97465015 GT ./. chr2 97465238 . C . . LowGQX END=97465437 GT ./. chr2 97474247 . G . . LowGQX END=97474531 GT ./. chr2 97474963 . T . . LowGQX END=97475306 GT ./. chr2 97482002 . G . . LowGQX END=97483242 GT ./. chr2 97490793 . A . . LowGQX END=97490941 GT ./. chr2 97492568 . A . . LowGQX END=97492722 GT ./. chr2 97493466 . A . . LowGQX END=97493640 GT ./. chr2 97493834 . A . . LowGQX END=97493935 GT ./. chr2 97494302 . A . . LowGQX END=97494440 GT ./. chr2 97494731 . A . . LowGQX END=97494874 GT ./. chr2 97498272 . T . . LowGQX END=97498372 GT ./. chr2 97498633 . G . . LowGQX END=97498747 GT ./. chr2 97505233 . C . . LowGQX END=97505384 GT ./. chr2 97505462 . A . . LowGQX END=97505565 GT ./. chr2 97505674 . T . . LowGQX END=97505835 GT ./. chr2 97505967 . A . . LowGQX END=97506070 GT ./. chr2 97506151 . A . . LowGQX END=97506254 GT ./. chr2 97506522 . A . . LowGQX END=97506652 GT ./. chr2 97507795 . A . . LowGQX END=97507925 GT ./. chr2 97508100 . A . . LowGQX END=97508251 GT ./. chr2 97509667 . C . . LowGQX END=97509767 GT ./. chr2 97514036 . G . . LowGQX END=97514184 GT ./. chr2 97519136 . A . . LowGQX END=97519344 GT ./. chr2 97520073 . A . . LowGQX END=97520181 GT ./. chr2 97523573 . C . . LowGQX END=97523727 GT ./. chr2 97526361 . C . . LowGQX END=97527389 GT ./. chr2 97527472 . A . . LowGQX END=97527634 GT ./. chr2 97529417 . A . . LowGQX END=97529534 GT ./. chr2 97529661 . A . . LowGQX END=97529888 GT ./. chr2 97529973 . A . . LowGQX END=97530122 GT ./. chr2 97530440 . A . . LowGQX END=97530620 GT ./. chr2 97530699 . A . . LowGQX END=97530855 GT ./. chr2 97530939 . A . . LowGQX END=97531060 GT ./. chr2 97531176 . A . . LowGQX END=97531277 GT ./. chr2 97531401 . A . . LowGQX END=97531504 GT ./. chr2 97531586 . C . . LowGQX END=97531686 GT ./. chr2 97532018 . A . . LowGQX END=97532437 GT ./. chr2 97533453 . C . . LowGQX END=97533672 GT ./. chr2 97541980 . C . . LowGQX END=97542080 GT ./. chr2 97543625 . A . . LowGQX END=97543782 GT ./. chr2 97544142 . G . . LowGQX END=97544242 GT ./. chr2 97559661 . A . . LowGQX END=97559831 GT ./. chr2 97560761 . A . . LowGQX END=97560861 GT ./. chr2 97568351 . A . . LowGQX END=97568451 GT ./. chr2 97586901 . C . . LowGQX END=97587001 GT ./. chr2 97587214 . C . . LowGQX END=97587392 GT ./. chr2 97589224 . C . . LowGQX END=97589324 GT ./. chr2 97594890 . T . . LowGQX END=97595102 GT ./. chr2 97613547 . G . . LowGQX END=97613647 GT ./. chr2 97617115 . C . . LowGQX END=97617222 GT ./. chr2 97625994 . C . . LowGQX END=97626178 GT ./. chr2 97633256 . C . . LowGQX END=97633365 GT ./. chr2 97636434 . G . . LowGQX END=97636534 GT ./. chr2 97637637 . C . . LowGQX END=97638060 GT ./. chr2 97638259 . G . . LowGQX END=97638359 GT ./. chr2 97643553 . C . . LowGQX END=97643670 GT ./. chr2 97651946 . C . . LowGQX END=97652124 GT ./. chr2 97653993 . G . . LowGQX END=97654093 GT ./. chr2 97674733 . C . . LowGQX END=97674922 GT ./. chr2 97684030 . A . . LowGQX END=97684184 GT ./. chr2 97749474 . G . . LowGQX END=97749574 GT ./. chr2 97749679 . A . . LowGQX END=97749779 GT ./. chr2 97749904 . A . . LowGQX END=97750017 GT ./. chr2 97751434 . A . . LowGQX END=97751601 GT ./. chr2 97751856 . G . . LowGQX END=97751956 GT ./. chr2 97755799 . C . . LowGQX END=97756065 GT ./. chr2 97757197 . A . . LowGQX END=97757446 GT ./. chr2 97779465 . C . . LowGQX END=97779676 GT ./. chr2 97783799 . A . . LowGQX END=97783918 GT ./. chr2 97784079 . A . . LowGQX END=97784263 GT ./. chr2 97788573 . G . . LowGQX END=97788731 GT ./. chr2 97790196 . G . . LowGQX END=97790376 GT ./. chr2 97792733 . A . . LowGQX END=97792888 GT ./. chr2 97808341 . A . . LowGQX END=97808586 GT ./. chr2 97810219 . A . . LowGQX END=97810319 GT ./. chr2 97810363 . G . . LowGQX END=97810463 GT ./. chr2 97812188 . T . . LowGQX END=97812288 GT ./. chr2 97814955 . C . . LowGQX END=97815115 GT ./. chr2 97817545 . A . . LowGQX END=97817696 GT ./. chr2 97818206 . T . . LowGQX END=97818306 GT ./. chr2 97820395 . A . . LowGQX END=97820495 GT ./. chr2 97823773 . T . . LowGQX END=97823924 GT ./. chr2 97824309 . T . . LowGQX END=97824409 GT ./. chr2 97827806 . T . . LowGQX END=97827906 GT ./. chr2 97828980 . G . . LowGQX END=97829086 GT ./. chr2 97829984 . A . . LowGQX END=97830084 GT ./. chr2 97830120 . T . . LowGQX END=97830220 GT ./. chr2 97833278 . A . . LowGQX END=97833378 GT ./. chr2 97833418 . T . . LowGQX END=97833518 GT ./. chr2 97845439 . A . . LowGQX END=97845539 GT ./. chr2 97845584 . C . . LowGQX END=97845684 GT ./. chr2 97847299 . A . . LowGQX END=97847544 GT ./. chr2 97849160 . A . . LowGQX END=97849260 GT ./. chr2 97849305 . C . . LowGQX END=97849405 GT ./. chr2 97850962 . A . . LowGQX END=97851117 GT ./. chr2 97851161 . C . . LowGQX END=97851261 GT ./. chr2 97852899 . A . . LowGQX END=97853152 GT ./. chr2 97854733 . A . . LowGQX END=97855041 GT ./. chr2 97856624 . G . . LowGQX END=97856932 GT ./. chr2 97858504 . A . . LowGQX END=97858804 GT ./. chr2 97860427 . A . . LowGQX END=97860527 GT ./. chr2 97860558 . T . . LowGQX END=97860658 GT ./. chr2 97862294 . A . . LowGQX END=97862394 GT ./. chr2 97862439 . C . . LowGQX END=97862539 GT ./. chr2 97864164 . A . . LowGQX END=97864264 GT ./. chr2 97864309 . C . . LowGQX END=97864409 GT ./. chr2 97866035 . A . . LowGQX END=97866135 GT ./. chr2 97866176 . C . . LowGQX END=97866276 GT ./. chr2 97867903 . A . . LowGQX END=97868003 GT ./. chr2 97868044 . T . . LowGQX END=97868144 GT ./. chr2 97869769 . A . . LowGQX END=97870014 GT ./. chr2 97871641 . A . . LowGQX END=97871886 GT ./. chr2 97873512 . A . . LowGQX END=97873757 GT ./. chr2 97875382 . A . . LowGQX END=97875482 GT ./. chr2 97875523 . C . . LowGQX END=97875623 GT ./. chr2 97877247 . A . . LowGQX END=97877347 GT ./. chr2 97877392 . C . . LowGQX END=97877492 GT ./. chr2 97879050 . A . . LowGQX END=97879365 GT ./. chr2 97881002 . A . . LowGQX END=97881102 GT ./. chr2 97881161 . G . . LowGQX END=97881313 GT ./. chr2 97881322 . A . . LowGQX END=97881422 GT ./. chr2 97882756 . T . . LowGQX END=97882856 GT ./. chr2 97882875 . T . . LowGQX END=97882975 GT ./. chr2 97883023 . C . . LowGQX END=97883123 GT ./. chr2 97884751 . A . . LowGQX END=97884851 GT ./. chr2 97884897 . T . . LowGQX END=97884997 GT ./. chr2 97890470 . A . . LowGQX END=97890630 GT ./. chr2 97899435 . G . . LowGQX END=97899609 GT ./. chr2 97906931 . A . . LowGQX END=97907281 GT ./. chr2 97909571 . G . . LowGQX END=97909767 GT ./. chr2 97910882 . T . . LowGQX END=97911809 GT ./. chr2 97913201 . A . . LowGQX END=97913408 GT ./. chr2 97914806 . T . . LowGQX END=97914966 GT ./. chr2 97915286 . T . . LowGQX END=97915437 GT ./. chr2 97915843 . T . . LowGQX END=97915943 GT ./. chr2 97918037 . A . . LowGQX END=97918197 GT ./. chr2 97927886 . G . . LowGQX END=97928046 GT ./. chr2 98000756 . C . . LowGQX END=98001186 GT ./. chr2 98001471 . G . . LowGQX END=98001631 GT ./. chr2 98123407 . A . . LowGQX END=98123567 GT ./. chr2 98123965 . C . . LowGQX END=98124124 GT ./. chr2 98124383 . A . . LowGQX END=98124543 GT ./. chr2 98125991 . T . . LowGQX END=98126197 GT ./. chr2 98127530 . G . . LowGQX END=98128580 GT ./. chr2 98129631 . A . . LowGQX END=98129827 GT ./. chr2 98132123 . T . . LowGQX END=98132473 GT ./. chr2 98139757 . T . . LowGQX END=98139931 GT ./. chr2 98148701 . T . . LowGQX END=98148861 GT ./. chr2 98152692 . G . . LowGQX END=98152995 GT ./. chr2 98154560 . A . . LowGQX END=98154862 GT ./. chr2 98156423 . C . . LowGQX END=98156728 GT ./. chr2 98158303 . T . . LowGQX END=98158606 GT ./. chr2 98160179 . C . . LowGQX END=98160484 GT ./. chr2 98162058 . G . . LowGQX END=98162360 GT ./. chr2 98163928 . G . . LowGQX END=98164230 GT ./. chr2 98165811 . G . . LowGQX END=98165968 GT ./. chr2 98166013 . T . . LowGQX END=98166113 GT ./. chr2 98167738 . T . . LowGQX END=98167838 GT ./. chr2 98167879 . T . . LowGQX END=98167979 GT ./. chr2 98169560 . A . . LowGQX END=98169870 GT ./. chr2 98171509 . T . . LowGQX END=98171609 GT ./. chr2 98171653 . G . . LowGQX END=98171753 GT ./. chr2 98173386 . T . . LowGQX END=98173486 GT ./. chr2 98173531 . A . . LowGQX END=98173631 GT ./. chr2 98175191 . A . . LowGQX END=98175348 GT ./. chr2 98175393 . G . . LowGQX END=98175493 GT ./. chr2 98177057 . A . . LowGQX END=98177359 GT ./. chr2 98192766 . T . . LowGQX END=98192981 GT ./. chr2 98195368 . C . . LowGQX END=98195507 GT ./. chr2 98196924 . C . . LowGQX END=98197032 GT ./. chr2 98201406 . C . . LowGQX END=98201581 GT ./. chr2 98201677 . G . . LowGQX END=98201862 GT ./. chr2 98205957 . T . . LowGQX END=98206149 GT ./. chr2 98262492 . A . . LowGQX END=98262655 GT ./. chr2 98263517 . T . . LowGQX END=98263617 GT ./. chr2 98263805 . A . . LowGQX END=98263909 GT ./. chr2 98264387 . G . . LowGQX END=98264574 GT ./. chr2 98273313 . C . . LowGQX END=98273426 GT ./. chr2 98273586 . C . . LowGQX END=98273686 GT ./. chr2 98273892 . G . . LowGQX END=98273992 GT ./. chr2 98274404 . A . . LowGQX END=98274583 GT ./. chr2 98274684 . T . . LowGQX END=98274784 GT ./. chr2 98274888 . A . . LowGQX END=98275109 GT ./. chr2 98275340 . A . . LowGQX END=98275469 GT ./. chr2 98275813 . A . . LowGQX END=98275943 GT ./. chr2 98277022 . C . . LowGQX END=98277122 GT ./. chr2 98278328 . G . . LowGQX END=98278428 GT ./. chr2 98280220 . C . . LowGQX END=98280380 GT ./. chr2 98340449 . A . . LowGQX END=98340953 GT ./. chr2 98341082 . C . . LowGQX END=98341182 GT ./. chr2 98341288 . G . . LowGQX END=98341388 GT ./. chr2 98341504 . G . . LowGQX END=98341767 GT ./. chr2 98349295 . G . . LowGQX END=98349948 GT ./. chr2 98349956 . A . . LowGQX END=98350110 GT ./. chr2 98350932 . C . . LowGQX END=98351227 GT ./. chr2 98351662 . A . . LowGQX END=98351971 GT ./. chr2 98353885 . G . . LowGQX END=98354622 GT ./. chr2 98355787 . C . . LowGQX END=98356013 GT ./. chr2 98373561 . T . . LowGQX END=98373847 GT ./. chr2 98375355 . C . . LowGQX END=98375517 GT ./. chr2 98376114 . C . . LowGQX END=98376214 GT ./. chr2 98377054 . A . . LowGQX END=98377154 GT ./. chr2 98377255 . C . . LowGQX END=98377407 GT ./. chr2 98378497 . C . . LowGQX END=98378686 GT ./. chr2 98382576 . C . . LowGQX END=98382727 GT ./. chr2 98382940 . C . . LowGQX END=98383066 GT ./. chr2 98388699 . C . . LowGQX END=98388928 GT ./. chr2 98392305 . C . . LowGQX END=98392482 GT ./. chr2 98408848 . C . . LowGQX END=98409448 GT ./. chr2 98409857 . C . . LowGQX END=98410017 GT ./. chr2 98411392 . C . . LowGQX END=98411579 GT ./. chr2 98412660 . A . . LowGQX END=98412880 GT ./. chr2 98413306 . C . . LowGQX END=98413450 GT ./. chr2 98413827 . C . . LowGQX END=98413980 GT ./. chr2 98418341 . G . . LowGQX END=98418441 GT ./. chr2 98418890 . C . . LowGQX END=98419001 GT ./. chr2 98419074 . A . . LowGQX END=98419294 GT ./. chr2 98421550 . C . . LowGQX END=98421669 GT ./. chr2 98421827 . A . . LowGQX END=98421927 GT ./. chr2 98422013 . C . . LowGQX END=98422167 GT ./. chr2 98426144 . G . . LowGQX END=98426244 GT ./. chr2 98427590 . C . . LowGQX END=98427696 GT ./. chr2 98428883 . C . . LowGQX END=98429019 GT ./. chr2 98429101 . C . . LowGQX END=98429213 GT ./. chr2 98430433 . C . . LowGQX END=98430605 GT ./. chr2 98430697 . C . . LowGQX END=98430852 GT ./. chr2 98431661 . C . . LowGQX END=98431821 GT ./. chr2 98435075 . C . . LowGQX END=98435185 GT ./. chr2 98449749 . G . . LowGQX END=98449967 GT ./. chr2 98451062 . C . . LowGQX END=98451162 GT ./. chr2 98451237 . C . . LowGQX END=98451389 GT ./. chr2 98453478 . C . . LowGQX END=98453630 GT ./. chr2 98458277 . C . . LowGQX END=98458401 GT ./. chr2 98460607 . C . . LowGQX END=98460767 GT ./. chr2 98475716 . G . . LowGQX END=98475891 GT ./. chr2 98504499 . A . . LowGQX END=98504599 GT ./. chr2 98525091 . T . . LowGQX END=98525191 GT ./. chr2 98543863 . A . . LowGQX END=98543963 GT ./. chr2 98611927 . G . . LowGQX END=98612126 GT ./. chr2 98709554 . A . . LowGQX END=98709754 GT ./. chr2 98732113 . A . . LowGQX END=98732213 GT ./. chr2 98735974 . A . . LowGQX END=98736229 GT ./. chr2 98737760 . A . . LowGQX END=98737924 GT ./. chr2 98744700 . A . . LowGQX END=98744874 GT ./. chr2 98750285 . A . . LowGQX END=98750405 GT ./. chr2 98779312 . A . . LowGQX END=98779442 GT ./. chr2 98795694 . C . . LowGQX END=98795794 GT ./. chr2 98797477 . A . . LowGQX END=98797678 GT ./. chr2 98804436 . A . . LowGQX END=98804595 GT ./. chr2 98809319 . T . . LowGQX END=98809502 GT ./. chr2 98810822 . A . . LowGQX END=98810958 GT ./. chr2 98828391 . A . . LowGQX END=98828494 GT ./. chr2 98833203 . T . . LowGQX END=98833303 GT ./. chr2 98833383 . T . . LowGQX END=98833483 GT ./. chr2 98834307 . A . . LowGQX END=98834494 GT ./. chr2 98844663 . A . . LowGQX END=98844798 GT ./. chr2 98846511 . A . . LowGQX END=98846673 GT ./. chr2 98851109 . A . . LowGQX END=98851233 GT ./. chr2 98852847 . C . . LowGQX END=98852947 GT ./. chr2 98853035 . A . . LowGQX END=98853203 GT ./. chr2 98858691 . C . . LowGQX END=98858791 GT ./. chr2 98861993 . A . . LowGQX END=98862093 GT ./. chr2 98866779 . A . . LowGQX END=98866902 GT ./. chr2 98872563 . T . . LowGQX END=98872663 GT ./. chr2 98887143 . A . . LowGQX END=98887349 GT ./. chr2 98906962 . T . . LowGQX END=98907172 GT ./. chr2 98914368 . A . . LowGQX END=98914497 GT ./. chr2 98916500 . C . . LowGQX END=98916682 GT ./. chr2 98920163 . A . . LowGQX END=98920268 GT ./. chr2 98928280 . A . . LowGQX END=98928815 GT ./. chr2 98948137 . T . . LowGQX END=98948237 GT ./. chr2 98949673 . C . . LowGQX END=98949773 GT ./. chr2 98949885 . T . . LowGQX END=98949985 GT ./. chr2 98950350 . A . . LowGQX END=98950450 GT ./. chr2 98986388 . T . . LowGQX END=98986591 GT ./. chr2 98994099 . A . . LowGQX END=98994315 GT ./. chr2 98994520 . G . . LowGQX END=98994686 GT ./. chr2 98996587 . T . . LowGQX END=98996869 GT ./. chr2 98999798 . C . . LowGQX END=98999956 GT ./. chr2 99006070 . A . . LowGQX END=99006289 GT ./. chr2 99008276 . A . . LowGQX END=99008485 GT ./. chr2 99012256 . C . . LowGQX END=99013770 GT ./. chr2 99136475 . A . . LowGQX END=99136635 GT ./. chr2 99137059 . G . . LowGQX END=99137222 GT ./. chr2 99149839 . G . . LowGQX END=99149959 GT ./. chr2 99152160 . C . . LowGQX END=99152320 GT ./. chr2 99152591 . G . . LowGQX END=99152702 GT ./. chr2 99154292 . A . . LowGQX END=99154438 GT ./. chr2 99155309 . T . . LowGQX END=99155445 GT ./. chr2 99155990 . G . . LowGQX END=99156150 GT ./. chr2 99160339 . G . . LowGQX END=99160471 GT ./. chr2 99162431 . G . . LowGQX END=99162554 GT ./. chr2 99163048 . G . . LowGQX END=99163173 GT ./. chr2 99165327 . A . . LowGQX END=99165485 GT ./. chr2 99169030 . A . . LowGQX END=99169130 GT ./. chr2 99169198 . T . . LowGQX END=99169433 GT ./. chr2 99170733 . G . . LowGQX END=99170953 GT ./. chr2 99172015 . G . . LowGQX END=99172272 GT ./. chr2 99175862 . A . . LowGQX END=99175962 GT ./. chr2 99179927 . G . . LowGQX END=99180107 GT ./. chr2 99181042 . C . . LowGQX END=99181227 GT ./. chr2 99182102 . G . . LowGQX END=99182262 GT ./. chr2 99182471 . C . . LowGQX END=99182633 GT ./. chr2 99185033 . G . . LowGQX END=99185153 GT ./. chr2 99189277 . G . . LowGQX END=99189404 GT ./. chr2 99193451 . G . . LowGQX END=99193607 GT ./. chr2 99198038 . G . . LowGQX END=99198220 GT ./. chr2 99203938 . G . . LowGQX END=99204118 GT ./. chr2 99217156 . T . . LowGQX END=99217308 GT ./. chr2 99218979 . G . . LowGQX END=99219139 GT ./. chr2 99220520 . T . . LowGQX END=99220706 GT ./. chr2 99224719 . G . . LowGQX END=99224920 GT ./. chr2 99226171 . A . . LowGQX END=99226505 GT ./. chr2 99227236 . A . . LowGQX END=99227361 GT ./. chr2 99232668 . A . . LowGQX END=99232812 GT ./. chr2 99232893 . A . . LowGQX END=99232999 GT ./. chr2 99234609 . T . . LowGQX END=99234799 GT ./. chr2 99237881 . A . . LowGQX END=99237981 GT ./. chr2 99241937 . G . . LowGQX END=99242093 GT ./. chr2 99242184 . A . . LowGQX END=99242301 GT ./. chr2 99251613 . T . . LowGQX END=99251769 GT ./. chr2 99252970 . G . . LowGQX END=99253070 GT ./. chr2 99256269 . A . . LowGQX END=99256467 GT ./. chr2 99256582 . A . . LowGQX END=99256694 GT ./. chr2 99260384 . A . . LowGQX END=99260519 GT ./. chr2 99261839 . C . . LowGQX END=99262008 GT ./. chr2 99271896 . A . . LowGQX END=99271996 GT ./. chr2 99272761 . G . . LowGQX END=99272931 GT ./. chr2 99274599 . G . . LowGQX END=99274755 GT ./. chr2 99279507 . A . . LowGQX END=99279645 GT ./. chr2 99279763 . A . . LowGQX END=99279863 GT ./. chr2 99291456 . A . . LowGQX END=99291641 GT ./. chr2 99294765 . A . . LowGQX END=99294937 GT ./. chr2 99342699 . T . . LowGQX END=99342799 GT ./. chr2 99410993 . A . . LowGQX END=99411137 GT ./. chr2 99412581 . A . . LowGQX END=99412730 GT ./. chr2 99413811 . A . . LowGQX END=99414003 GT ./. chr2 99438248 . T . . LowGQX END=99440068 GT ./. chr2 99443436 . A . . LowGQX END=99443635 GT ./. chr2 99448779 . T . . LowGQX END=99448978 GT ./. chr2 99449253 . A . . LowGQX END=99449463 GT ./. chr2 99454580 . A . . LowGQX END=99454753 GT ./. chr2 99463183 . C . . LowGQX END=99463283 GT ./. chr2 99485528 . T . . LowGQX END=99485628 GT ./. chr2 99513806 . A . . LowGQX END=99513906 GT ./. chr2 99614623 . T . . LowGQX END=99614723 GT ./. chr2 99634661 . A . . LowGQX END=99634815 GT ./. chr2 99634997 . A . . LowGQX END=99635106 GT ./. chr2 99636741 . A . . LowGQX END=99636948 GT ./. chr2 99651691 . A . . LowGQX END=99651905 GT ./. chr2 99681400 . A . . LowGQX END=99681590 GT ./. chr2 99685349 . A . . LowGQX END=99685509 GT ./. chr2 99688167 . A . . LowGQX END=99688340 GT ./. chr2 99689459 . A . . LowGQX END=99689559 GT ./. chr2 99695090 . G . . LowGQX END=99695279 GT ./. chr2 99697693 . T . . LowGQX END=99697863 GT ./. chr2 99720428 . A . . LowGQX END=99720584 GT ./. chr2 99721811 . T . . LowGQX END=99721911 GT ./. chr2 99721988 . A . . LowGQX END=99722163 GT ./. chr2 99725294 . A . . LowGQX END=99725457 GT ./. chr2 99725828 . T . . LowGQX END=99725928 GT ./. chr2 99743481 . T . . LowGQX END=99743640 GT ./. chr2 99757517 . C . . LowGQX END=99757617 GT ./. chr2 99763894 . A . . LowGQX END=99763994 GT ./. chr2 99766944 . A . . LowGQX END=99767300 GT ./. chr2 99771436 . T . . LowGQX END=99771536 GT ./. chr2 99771927 . T . . LowGQX END=99772027 GT ./. chr2 99778419 . G . . LowGQX END=99779545 GT ./. chr2 99785836 . C . . LowGQX END=99785936 GT ./. chr2 99785994 . T . . LowGQX END=99786094 GT ./. chr2 99786998 . A . . LowGQX END=99787118 GT ./. chr2 99787800 . A . . LowGQX END=99787900 GT ./. chr2 99787971 . A . . LowGQX END=99788112 GT ./. chr2 99789885 . T . . LowGQX END=99789985 GT ./. chr2 99790306 . G . . LowGQX END=99790482 GT ./. chr2 99797286 . T . . LowGQX END=99797447 GT ./. chr2 99802194 . G . . LowGQX END=99802294 GT ./. chr2 99802630 . C . . LowGQX END=99802730 GT ./. chr2 99804631 . A . . LowGQX END=99804731 GT ./. chr2 99811182 . A . . LowGQX END=99811388 GT ./. chr2 99811577 . A . . LowGQX END=99811696 GT ./. chr2 99812034 . A . . LowGQX END=99812224 GT ./. chr2 99858825 . G . . LowGQX END=99858948 GT ./. chr2 99859878 . G . . LowGQX END=99859978 GT ./. chr2 99860432 . T . . LowGQX END=99860603 GT ./. chr2 99861723 . A . . LowGQX END=99861924 GT ./. chr2 99863141 . A . . LowGQX END=99863286 GT ./. chr2 99870589 . A . . LowGQX END=99870753 GT ./. chr2 99900854 . T . . LowGQX END=99900977 GT ./. chr2 99901149 . A . . LowGQX END=99901286 GT ./. chr2 99907698 . A . . LowGQX END=99907887 GT ./. chr2 99908997 . A . . LowGQX END=99909106 GT ./. chr2 99912063 . G . . LowGQX END=99912163 GT ./. chr2 99923192 . G . . LowGQX END=99923292 GT ./. chr2 99936093 . A . . LowGQX END=99936265 GT ./. chr2 99938413 . G . . LowGQX END=99938675 GT ./. chr2 99939044 . T . . LowGQX END=99939144 GT ./. chr2 99943996 . A . . LowGQX END=99944119 GT ./. chr2 99949452 . T . . LowGQX END=99949706 GT ./. chr2 99953926 . A . . LowGQX END=99954086 GT ./. chr2 99954739 . G . . LowGQX END=99954839 GT ./. chr2 99976697 . A . . LowGQX END=99976827 GT ./. chr2 99976921 . T . . LowGQX END=99977021 GT ./. chr2 99977609 . A . . LowGQX END=99978286 GT ./. chr2 99980106 . A . . LowGQX END=99980328 GT ./. chr2 99980732 . A . . LowGQX END=99980887 GT ./. chr2 99984904 . C . . LowGQX END=99985057 GT ./. chr2 99985850 . T . . LowGQX END=99985950 GT ./. chr2 99988107 . T . . LowGQX END=99988207 GT ./. chr2 99992808 . A . . LowGQX END=99993102 GT ./. chr2 99995480 . A . . LowGQX END=99995592 GT ./. chr2 99995779 . A . . LowGQX END=99995894 GT ./. chr2 99998606 . T . . LowGQX END=99998706 GT ./. chr2 99999241 . A . . LowGQX END=99999387 GT ./. chr2 100006179 . A . . LowGQX END=100006315 GT ./. chr2 100006680 . A . . LowGQX END=100006867 GT ./. chr2 100007005 . A . . LowGQX END=100007171 GT ./. chr2 100009428 . A . . LowGQX END=100009564 GT ./. chr2 100010728 . A . . LowGQX END=100010864 GT ./. chr2 100010961 . C . . LowGQX END=100011061 GT ./. chr2 100011180 . A . . LowGQX END=100011349 GT ./. chr2 100013221 . A . . LowGQX END=100013364 GT ./. chr2 100015209 . A . . LowGQX END=100015375 GT ./. chr2 100015768 . A . . LowGQX END=100015880 GT ./. chr2 100017702 . A . . LowGQX END=100017818 GT ./. chr2 100018705 . A . . LowGQX END=100018865 GT ./. chr2 100019105 . A . . LowGQX END=100019266 GT ./. chr2 100019350 . A . . LowGQX END=100019572 GT ./. chr2 100020156 . A . . LowGQX END=100020281 GT ./. chr2 100020835 . G . . LowGQX END=100021205 GT ./. chr2 100022370 . A . . LowGQX END=100022571 GT ./. chr2 100022785 . A . . LowGQX END=100022955 GT ./. chr2 100024489 . A . . LowGQX END=100024596 GT ./. chr2 100027155 . A . . LowGQX END=100027332 GT ./. chr2 100029191 . A . . LowGQX END=100029416 GT ./. chr2 100035288 . A . . LowGQX END=100035412 GT ./. chr2 100037959 . A . . LowGQX END=100038118 GT ./. chr2 100040612 . A . . LowGQX END=100040745 GT ./. chr2 100041243 . T . . LowGQX END=100041362 GT ./. chr2 100046300 . A . . LowGQX END=100046413 GT ./. chr2 100050792 . A . . LowGQX END=100050913 GT ./. chr2 100052294 . A . . LowGQX END=100052454 GT ./. chr2 100055037 . A . . LowGQX END=100055775 GT ./. chr2 100058777 . A . . LowGQX END=100058934 GT ./. chr2 100065776 . A . . LowGQX END=100065969 GT ./. chr2 100067901 . T . . LowGQX END=100068001 GT ./. chr2 100078956 . A . . LowGQX END=100079126 GT ./. chr2 100081361 . A . . LowGQX END=100081461 GT ./. chr2 100167934 . C . . LowGQX END=100168060 GT ./. chr2 100170771 . A . . LowGQX END=100170999 GT ./. chr2 100171120 . A . . LowGQX END=100171220 GT ./. chr2 100175334 . T . . LowGQX END=100175434 GT ./. chr2 100176813 . A . . LowGQX END=100176913 GT ./. chr2 100181947 . A . . LowGQX END=100182088 GT ./. chr2 100185296 . G . . LowGQX END=100185396 GT ./. chr2 100189044 . A . . LowGQX END=100189144 GT ./. chr2 100194787 . A . . LowGQX END=100194957 GT ./. chr2 100197148 . A . . LowGQX END=100197308 GT ./. chr2 100199258 . A . . LowGQX END=100199464 GT ./. chr2 100203614 . A . . LowGQX END=100203743 GT ./. chr2 100209655 . A . . LowGQX END=100210754 GT ./. chr2 100217895 . A . . LowGQX END=100218086 GT ./. chr2 100247423 . C . . LowGQX END=100247523 GT ./. chr2 100266059 . T . . LowGQX END=100266159 GT ./. chr2 100288976 . T . . LowGQX END=100289076 GT ./. chr2 100343514 . C . . LowGQX END=100343665 GT ./. chr2 100360535 . A . . LowGQX END=100360635 GT ./. chr2 100368674 . A . . LowGQX END=100368774 GT ./. chr2 100453913 . T . . LowGQX END=100454013 GT ./. chr2 100623092 . A . . LowGQX END=100623482 GT ./. chr2 100623608 . A . . LowGQX END=100623925 GT ./. chr2 100625272 . A . . LowGQX END=100625397 GT ./. chr2 100627947 . C . . LowGQX END=100628047 GT ./. chr2 100720821 . T . . LowGQX END=100720981 GT ./. chr2 100721956 . T . . LowGQX END=100722056 GT ./. chr2 100722090 . A . . LowGQX END=100722190 GT ./. chr2 100722241 . C . . LowGQX END=100722485 GT ./. chr2 100900758 . A . . LowGQX END=100900957 GT ./. chr2 100903374 . A . . LowGQX END=100903528 GT ./. chr2 100906718 . A . . LowGQX END=100906885 GT ./. chr2 100910619 . T . . LowGQX END=100910852 GT ./. chr2 100911892 . A . . LowGQX END=100912018 GT ./. chr2 100915296 . A . . LowGQX END=100915415 GT ./. chr2 100915685 . T . . LowGQX END=100915785 GT ./. chr2 100916177 . A . . LowGQX END=100916383 GT ./. chr2 100917104 . A . . LowGQX END=100917252 GT ./. chr2 100919381 . A . . LowGQX END=100919508 GT ./. chr2 100925567 . A . . LowGQX END=100925737 GT ./. chr2 100937864 . G . . LowGQX END=100938558 GT ./. chr2 101009705 . C . . LowGQX END=101010247 GT ./. chr2 101011969 . A . . LowGQX END=101012079 GT ./. chr2 101014368 . A . . LowGQX END=101014607 GT ./. chr2 101019022 . C . . LowGQX END=101019122 GT ./. chr2 101023036 . A . . LowGQX END=101023170 GT ./. chr2 101031488 . T . . LowGQX END=101031588 GT ./. chr2 101033421 . G . . LowGQX END=101033521 GT ./. chr2 101086939 . C . . LowGQX END=101087039 GT ./. chr2 101089235 . A . . LowGQX END=101089335 GT ./. chr2 101089927 . T . . LowGQX END=101090027 GT ./. chr2 101093668 . A . . LowGQX END=101093768 GT ./. chr2 101093800 . T . . LowGQX END=101093900 GT ./. chr2 101095803 . T . . LowGQX END=101095903 GT ./. chr2 101096926 . G . . LowGQX END=101097026 GT ./. chr2 101097559 . A . . LowGQX END=101097659 GT ./. chr2 101098707 . C . . LowGQX END=101098807 GT ./. chr2 101099671 . A . . LowGQX END=101099771 GT ./. chr2 101125739 . A . . LowGQX END=101126078 GT ./. chr2 101179483 . G . . LowGQX END=101179583 GT ./. chr2 101182963 . A . . LowGQX END=101183094 GT ./. chr2 101185389 . T . . LowGQX END=101185489 GT ./. chr2 101186038 . A . . LowGQX END=101186186 GT ./. chr2 101188050 . A . . LowGQX END=101188290 GT ./. chr2 101192814 . A . . LowGQX END=101192961 GT ./. chr2 101437487 . G . . LowGQX END=101437662 GT ./. chr2 101521173 . A . . LowGQX END=101521273 GT ./. chr2 101541606 . A . . LowGQX END=101541763 GT ./. chr2 101549368 . C . . LowGQX END=101549468 GT ./. chr2 101554210 . C . . LowGQX END=101554310 GT ./. chr2 101564645 . T . . LowGQX END=101564820 GT ./. chr2 101565777 . C . . LowGQX END=101565945 GT ./. chr2 101580518 . A . . LowGQX END=101580641 GT ./. chr2 101581261 . C . . LowGQX END=101581415 GT ./. chr2 101582120 . A . . LowGQX END=101582231 GT ./. chr2 101584741 . A . . LowGQX END=101584893 GT ./. chr2 101587445 . T . . LowGQX END=101587545 GT ./. chr2 101591263 . A . . LowGQX END=101591409 GT ./. chr2 101591918 . A . . LowGQX END=101592032 GT ./. chr2 101594167 . C . . LowGQX END=101594267 GT ./. chr2 101598691 . A . . LowGQX END=101598842 GT ./. chr2 101604539 . A . . LowGQX END=101604741 GT ./. chr2 101606716 . A . . LowGQX END=101606911 GT ./. chr2 101607239 . A . . LowGQX END=101607339 GT ./. chr2 101609807 . A . . LowGQX END=101609992 GT ./. chr2 101611860 . A . . LowGQX END=101612047 GT ./. chr2 101612217 . A . . LowGQX END=101612317 GT ./. chr2 101619162 . A . . LowGQX END=101619273 GT ./. chr2 101620618 . A . . LowGQX END=101620753 GT ./. chr2 101622379 . A . . LowGQX END=101622554 GT ./. chr2 101622778 . T . . LowGQX END=101622878 GT ./. chr2 101624282 . G . . LowGQX END=101624736 GT ./. chr2 101627390 . C . . LowGQX END=101627490 GT ./. chr2 101627908 . C . . LowGQX END=101628008 GT ./. chr2 101634294 . A . . LowGQX END=101634394 GT ./. chr2 101635430 . A . . LowGQX END=101635530 GT ./. chr2 101638126 . T . . LowGQX END=101638226 GT ./. chr2 101638672 . G . . LowGQX END=101639052 GT ./. chr2 101640044 . C . . LowGQX END=101640144 GT ./. chr2 101643829 . T . . LowGQX END=101643929 GT ./. chr2 101644509 . C . . LowGQX END=101644609 GT ./. chr2 101644714 . T . . LowGQX END=101644895 GT ./. chr2 101645952 . C . . LowGQX END=101646239 GT ./. chr2 101648729 . C . . LowGQX END=101648848 GT ./. chr2 101649850 . T . . LowGQX END=101650221 GT ./. chr2 101652479 . C . . LowGQX END=101652631 GT ./. chr2 101653993 . C . . LowGQX END=101654193 GT ./. chr2 101654922 . C . . LowGQX END=101655118 GT ./. chr2 101656639 . C . . LowGQX END=101656848 GT ./. chr2 101666862 . C . . LowGQX END=101667104 GT ./. chr2 101670569 . C . . LowGQX END=101670799 GT ./. chr2 101675882 . C . . LowGQX END=101676002 GT ./. chr2 101706670 . C . . LowGQX END=101706827 GT ./. chr2 101767547 . C . . LowGQX END=101767716 GT ./. chr2 101869425 . T . . LowGQX END=101869943 GT ./. chr2 101874251 . A . . LowGQX END=101874420 GT ./. chr2 101878999 . A . . LowGQX END=101879156 GT ./. chr2 101881305 . A . . LowGQX END=101881512 GT ./. chr2 101883137 . A . . LowGQX END=101883344 GT ./. chr2 101885500 . A . . LowGQX END=101885605 GT ./. chr2 101885676 . A . . LowGQX END=101885878 GT ./. chr2 101889398 . A . . LowGQX END=101889512 GT ./. chr2 101889737 . C . . LowGQX END=101889837 GT ./. chr2 101893612 . A . . LowGQX END=101893772 GT ./. chr2 101898319 . A . . LowGQX END=101898522 GT ./. chr2 101902541 . A . . LowGQX END=101902642 GT ./. chr2 101905427 . G . . LowGQX END=101905527 GT ./. chr2 101910461 . C . . LowGQX END=101910561 GT ./. chr2 101911391 . A . . LowGQX END=101911646 GT ./. chr2 101924589 . A . . LowGQX END=101925053 GT ./. chr2 101967383 . C . . LowGQX END=101967535 GT ./. chr2 101971713 . A . . LowGQX END=101971831 GT ./. chr2 101999982 . A . . LowGQX END=102000167 GT ./. chr2 102003477 . A . . LowGQX END=102003922 GT ./. chr2 102014009 . C . . LowGQX END=102014187 GT ./. chr2 102018897 . C . . LowGQX END=102019215 GT ./. chr2 102022404 . C . . LowGQX END=102022520 GT ./. chr2 102027078 . T . . LowGQX END=102027178 GT ./. chr2 102029376 . C . . LowGQX END=102029566 GT ./. chr2 102031295 . A . . LowGQX END=102031395 GT ./. chr2 102033995 . C . . LowGQX END=102034147 GT ./. chr2 102035260 . T . . LowGQX END=102035427 GT ./. chr2 102038157 . C . . LowGQX END=102038257 GT ./. chr2 102038823 . C . . LowGQX END=102038935 GT ./. chr2 102045400 . T . . LowGQX END=102045500 GT ./. chr2 102067049 . T . . LowGQX END=102067149 GT ./. chr2 102068768 . G . . LowGQX END=102068928 GT ./. chr2 102083188 . T . . LowGQX END=102083363 GT ./. chr2 102090591 . G . . LowGQX END=102090751 GT ./. chr2 102314462 . C . . LowGQX END=102314621 GT ./. chr2 102314864 . A . . LowGQX END=102315018 GT ./. chr2 102407160 . A . . LowGQX END=102407260 GT ./. chr2 102413725 . A . . LowGQX END=102413846 GT ./. chr2 102440389 . G . . LowGQX END=102440516 GT ./. chr2 102441780 . G . . LowGQX END=102441892 GT ./. chr2 102445961 . T . . LowGQX END=102446061 GT ./. chr2 102448122 . A . . LowGQX END=102448314 GT ./. chr2 102450788 . A . . LowGQX END=102450948 GT ./. chr2 102452351 . C . . LowGQX END=102452451 GT ./. chr2 102456280 . G . . LowGQX END=102456457 GT ./. chr2 102459057 . C . . LowGQX END=102459157 GT ./. chr2 102460562 . G . . LowGQX END=102460774 GT ./. chr2 102472438 . G . . LowGQX END=102472601 GT ./. chr2 102475451 . G . . LowGQX END=102475551 GT ./. chr2 102476104 . G . . LowGQX END=102476402 GT ./. chr2 102477286 . G . . LowGQX END=102477449 GT ./. chr2 102480282 . G . . LowGQX END=102480514 GT ./. chr2 102481391 . G . . LowGQX END=102481499 GT ./. chr2 102482889 . G . . LowGQX END=102483042 GT ./. chr2 102483673 . G . . LowGQX END=102483781 GT ./. chr2 102484445 . A . . LowGQX END=102484545 GT ./. chr2 102486072 . C . . LowGQX END=102486260 GT ./. chr2 102486756 . G . . LowGQX END=102486878 GT ./. chr2 102487955 . G . . LowGQX END=102488148 GT ./. chr2 102490108 . G . . LowGQX END=102490227 GT ./. chr2 102490543 . G . . LowGQX END=102490715 GT ./. chr2 102493464 . G . . LowGQX END=102493609 GT ./. chr2 102499012 . G . . LowGQX END=102499148 GT ./. chr2 102501648 . G . . LowGQX END=102501750 GT ./. chr2 102503549 . G . . LowGQX END=102503724 GT ./. chr2 102504239 . G . . LowGQX END=102504400 GT ./. chr2 102505257 . G . . LowGQX END=102505398 GT ./. chr2 102507620 . T . . LowGQX END=102507720 GT ./. chr2 102509222 . T . . LowGQX END=102509805 GT ./. chr2 102625022 . G . . LowGQX END=102625122 GT ./. chr2 102626022 . A . . LowGQX END=102626291 GT ./. chr2 102632331 . A . . LowGQX END=102632516 GT ./. chr2 102636098 . A . . LowGQX END=102636277 GT ./. chr2 102638631 . T . . LowGQX END=102638731 GT ./. chr2 102640993 . A . . LowGQX END=102641135 GT ./. chr2 102642571 . A . . LowGQX END=102642718 GT ./. chr2 102644686 . A . . LowGQX END=102644857 GT ./. chr2 102774113 . T . . LowGQX END=102774266 GT ./. chr2 102781232 . A . . LowGQX END=102781471 GT ./. chr2 102781573 . A . . LowGQX END=102781767 GT ./. chr2 102782571 . A . . LowGQX END=102782744 GT ./. chr2 102785041 . G . . LowGQX END=102785141 GT ./. chr2 102788259 . A . . LowGQX END=102788381 GT ./. chr2 102789145 . A . . LowGQX END=102789301 GT ./. chr2 102791045 . A . . LowGQX END=102791193 GT ./. chr2 102791936 . A . . LowGQX END=102792147 GT ./. chr2 102792811 . A . . LowGQX END=102793222 GT ./. chr2 102793570 . A . . LowGQX END=102793730 GT ./. chr2 102803459 . T . . LowGQX END=102803559 GT ./. chr2 102804302 . T . . LowGQX END=102804402 GT ./. chr2 102805534 . A . . LowGQX END=102805773 GT ./. chr2 102808373 . T . . LowGQX END=102808583 GT ./. chr2 102818014 . A . . LowGQX END=102818178 GT ./. chr2 102828548 . A . . LowGQX END=102828648 GT ./. chr2 102835411 . A . . LowGQX END=102835591 GT ./. chr2 102836339 . A . . LowGQX END=102836480 GT ./. chr2 102842356 . A . . LowGQX END=102842504 GT ./. chr2 102849421 . A . . LowGQX END=102849587 GT ./. chr2 102851355 . A . . LowGQX END=102851740 GT ./. chr2 102855627 . G . . LowGQX END=102855727 GT ./. chr2 102954706 . C . . LowGQX END=102954806 GT ./. chr2 102955295 . A . . LowGQX END=102955510 GT ./. chr2 102956556 . A . . LowGQX END=102956766 GT ./. chr2 102957094 . T . . LowGQX END=102957291 GT ./. chr2 102957647 . G . . LowGQX END=102957818 GT ./. chr2 102958669 . T . . LowGQX END=102958769 GT ./. chr2 102959494 . A . . LowGQX END=102959640 GT ./. chr2 102959728 . A . . LowGQX END=102959895 GT ./. chr2 102964403 . A . . LowGQX END=102964554 GT ./. chr2 102965537 . A . . LowGQX END=102965709 GT ./. chr2 102967994 . A . . LowGQX END=102968384 GT ./. chr2 102979100 . A . . LowGQX END=102979200 GT ./. chr2 102984283 . A . . LowGQX END=102984531 GT ./. chr2 102988411 . A . . LowGQX END=102988601 GT ./. chr2 102990369 . A . . LowGQX END=102990503 GT ./. chr2 102992365 . A . . LowGQX END=102992526 GT ./. chr2 102998062 . T . . LowGQX END=102998162 GT ./. chr2 103001286 . T . . LowGQX END=103001461 GT ./. chr2 103003279 . A . . LowGQX END=103003463 GT ./. chr2 103006514 . A . . LowGQX END=103006680 GT ./. chr2 103010927 . A . . LowGQX END=103011090 GT ./. chr2 103012989 . A . . LowGQX END=103013349 GT ./. chr2 103039723 . G . . LowGQX END=103039823 GT ./. chr2 103040269 . A . . LowGQX END=103040598 GT ./. chr2 103040689 . A . . LowGQX END=103040877 GT ./. chr2 103053670 . A . . LowGQX END=103053825 GT ./. chr2 103057755 . T . . LowGQX END=103057855 GT ./. chr2 103059658 . A . . LowGQX END=103059828 GT ./. chr2 103061647 . A . . LowGQX END=103061803 GT ./. chr2 103063528 . A . . LowGQX END=103063670 GT ./. chr2 103067306 . A . . LowGQX END=103067484 GT ./. chr2 103068224 . A . . LowGQX END=103068644 GT ./. chr2 103090217 . G . . LowGQX END=103090477 GT ./. chr2 103095296 . A . . LowGQX END=103095764 GT ./. chr2 103119905 . A . . LowGQX END=103120169 GT ./. chr2 103121711 . A . . LowGQX END=103121933 GT ./. chr2 103124536 . A . . LowGQX END=103124743 GT ./. chr2 103125300 . A . . LowGQX END=103125400 GT ./. chr2 103128648 . T . . LowGQX END=103128748 GT ./. chr2 103130547 . A . . LowGQX END=103130713 GT ./. chr2 103136316 . A . . LowGQX END=103136417 GT ./. chr2 103141481 . A . . LowGQX END=103141617 GT ./. chr2 103142712 . C . . LowGQX END=103142812 GT ./. chr2 103148787 . A . . LowGQX END=103149150 GT ./. chr2 103236306 . C . . LowGQX END=103236599 GT ./. chr2 103274021 . A . . LowGQX END=103274489 GT ./. chr2 103281557 . A . . LowGQX END=103281812 GT ./. chr2 103299718 . A . . LowGQX END=103299940 GT ./. chr2 103300591 . A . . LowGQX END=103300798 GT ./. chr2 103310868 . T . . LowGQX END=103311021 GT ./. chr2 103311488 . T . . LowGQX END=103311588 GT ./. chr2 103317527 . A . . LowGQX END=103317717 GT ./. chr2 103318813 . T . . LowGQX END=103318964 GT ./. chr2 103321001 . A . . LowGQX END=103321137 GT ./. chr2 103322301 . A . . LowGQX END=103322401 GT ./. chr2 103324576 . A . . LowGQX END=103324951 GT ./. chr2 103334867 . G . . LowGQX END=103335669 GT ./. chr2 103340157 . A . . LowGQX END=103340371 GT ./. chr2 103343302 . A . . LowGQX END=103343436 GT ./. chr2 103347456 . A . . LowGQX END=103347556 GT ./. chr2 103348519 . C . . LowGQX END=103348619 GT ./. chr2 103348775 . A . . LowGQX END=103348875 GT ./. chr2 103353052 . C . . LowGQX END=103353272 GT ./. chr2 103374881 . A . . LowGQX END=103374981 GT ./. chr2 103378635 . A . . LowGQX END=103378811 GT ./. chr2 103379044 . A . . LowGQX END=103379148 GT ./. chr2 103380786 . A . . LowGQX END=103380889 GT ./. chr2 103414320 . A . . LowGQX END=103414462 GT ./. chr2 103431205 . A . . LowGQX END=103431430 GT ./. chr2 104995539 . T . . LowGQX END=104996103 GT ./. chr2 105471956 . G . . LowGQX END=105473474 GT ./. chr2 105484656 . C . . LowGQX END=105484851 GT ./. chr2 105488695 . T . . LowGQX END=105488795 GT ./. chr2 105654549 . A . . LowGQX END=105654688 GT ./. chr2 105665627 . A . . LowGQX END=105665827 GT ./. chr2 105687753 . C . . LowGQX END=105687853 GT ./. chr2 105687883 . T . . LowGQX END=105687983 GT ./. chr2 105696431 . T . . LowGQX END=105696531 GT ./. chr2 105705435 . G . . LowGQX END=105705535 GT ./. chr2 105706366 . A . . LowGQX END=105706466 GT ./. chr2 105707751 . T . . LowGQX END=105707851 GT ./. chr2 105708857 . A . . LowGQX END=105709030 GT ./. chr2 105709986 . A . . LowGQX END=105710099 GT ./. chr2 105713611 . A . . LowGQX END=105713785 GT ./. chr2 105716124 . G . . LowGQX END=105716224 GT ./. chr2 105858314 . C . . LowGQX END=105859437 GT ./. chr2 105883838 . T . . LowGQX END=105884019 GT ./. chr2 105885727 . A . . LowGQX END=105886165 GT ./. chr2 105889280 . C . . LowGQX END=105889474 GT ./. chr2 105889999 . A . . LowGQX END=105890150 GT ./. chr2 105892013 . A . . LowGQX END=105892163 GT ./. chr2 105894050 . T . . LowGQX END=105894150 GT ./. chr2 105896837 . A . . LowGQX END=105897183 GT ./. chr2 105900765 . C . . LowGQX END=105900865 GT ./. chr2 105912781 . A . . LowGQX END=105912970 GT ./. chr2 105914966 . A . . LowGQX END=105915165 GT ./. chr2 105924069 . A . . LowGQX END=105924761 GT ./. chr2 105953930 . C . . LowGQX END=105954146 GT ./. chr2 105956018 . A . . LowGQX END=105956209 GT ./. chr2 105959303 . A . . LowGQX END=105959683 GT ./. chr2 105961751 . A . . LowGQX END=105961851 GT ./. chr2 105977738 . A . . LowGQX END=105977894 GT ./. chr2 105979740 . A . . LowGQX END=105979931 GT ./. chr2 105984025 . A . . LowGQX END=105984199 GT ./. chr2 105989987 . T . . LowGQX END=105990193 GT ./. chr2 105994522 . C . . LowGQX END=105994622 GT ./. chr2 106002816 . A . . LowGQX END=106002998 GT ./. chr2 106006523 . A . . LowGQX END=106006685 GT ./. chr2 106013079 . A . . LowGQX END=106013179 GT ./. chr2 106015298 . C . . LowGQX END=106015559 GT ./. chr2 106015679 . C . . LowGQX END=106016008 GT ./. chr2 106471518 . A . . LowGQX END=106471748 GT ./. chr2 106497782 . A . . LowGQX END=106498508 GT ./. chr2 106509436 . A . . LowGQX END=106509635 GT ./. chr2 106682158 . C . . LowGQX END=106682369 GT ./. chr2 106687370 . C . . LowGQX END=106687470 GT ./. chr2 106688274 . A . . LowGQX END=106688374 GT ./. chr2 106690340 . A . . LowGQX END=106690502 GT ./. chr2 106694219 . A . . LowGQX END=106694385 GT ./. chr2 106710481 . T . . LowGQX END=106710661 GT ./. chr2 106713173 . C . . LowGQX END=106713699 GT ./. chr2 106715151 . G . . LowGQX END=106715251 GT ./. chr2 106717456 . T . . LowGQX END=106717575 GT ./. chr2 106721222 . A . . LowGQX END=106721322 GT ./. chr2 106729099 . T . . LowGQX END=106729222 GT ./. chr2 106739425 . C . . LowGQX END=106739548 GT ./. chr2 106742056 . T . . LowGQX END=106742156 GT ./. chr2 106746072 . T . . LowGQX END=106746235 GT ./. chr2 106761645 . C . . LowGQX END=106761827 GT ./. chr2 106774494 . A . . LowGQX END=106774594 GT ./. chr2 106780042 . T . . LowGQX END=106780195 GT ./. chr2 106781174 . A . . LowGQX END=106781274 GT ./. chr2 106782476 . T . . LowGQX END=106782576 GT ./. chr2 106810541 . C . . LowGQX END=106810701 GT ./. chr2 107007902 . A . . LowGQX END=107008002 GT ./. chr2 107021630 . C . . LowGQX END=107021730 GT ./. chr2 107029184 . G . . LowGQX END=107029284 GT ./. chr2 107029468 . A . . LowGQX END=107029808 GT ./. chr2 107032305 . C . . LowGQX END=107032446 GT ./. chr2 107039498 . C . . LowGQX END=107041723 GT ./. chr2 107042388 . A . . LowGQX END=107042547 GT ./. chr2 107046101 . C . . LowGQX END=107046280 GT ./. chr2 107049383 . T . . LowGQX END=107049483 GT ./. chr2 107049550 . T . . LowGQX END=107049742 GT ./. chr2 107050683 . C . . LowGQX END=107050831 GT ./. chr2 107051061 . A . . LowGQX END=107051231 GT ./. chr2 107051496 . C . . LowGQX END=107051685 GT ./. chr2 107052578 . C . . LowGQX END=107052747 GT ./. chr2 107052869 . C . . LowGQX END=107053068 GT ./. chr2 107053117 . A . . LowGQX END=107053311 GT ./. chr2 107055352 . C . . LowGQX END=107055702 GT ./. chr2 107057743 . T . . LowGQX END=107057843 GT ./. chr2 107063862 . T . . LowGQX END=107064070 GT ./. chr2 107068568 . T . . LowGQX END=107068807 GT ./. chr2 107069080 . G . . LowGQX END=107069450 GT ./. chr2 107073426 . C . . LowGQX END=107073580 GT ./. chr2 107073971 . G . . LowGQX END=107074135 GT ./. chr2 107075650 . C . . LowGQX END=107075805 GT ./. chr2 107084602 . C . . LowGQX END=107084759 GT ./. chr2 107423132 . T . . LowGQX END=107423408 GT ./. chr2 107429589 . G . . LowGQX END=107429689 GT ./. chr2 107446500 . C . . LowGQX END=107446699 GT ./. chr2 107449019 . A . . LowGQX END=107449178 GT ./. chr2 107450503 . A . . LowGQX END=107450605 GT ./. chr2 107459489 . A . . LowGQX END=107460436 GT ./. chr2 108443399 . T . . LowGQX END=108443556 GT ./. chr2 108452987 . T . . LowGQX END=108453142 GT ./. chr2 108454712 . G . . LowGQX END=108454871 GT ./. chr2 108455236 . T . . LowGQX END=108455421 GT ./. chr2 108459393 . T . . LowGQX END=108459763 GT ./. chr2 108460040 . G . . LowGQX END=108460279 GT ./. chr2 108464785 . T . . LowGQX END=108464993 GT ./. chr2 108471006 . T . . LowGQX END=108471106 GT ./. chr2 108473144 . C . . LowGQX END=108473494 GT ./. chr2 108475498 . T . . LowGQX END=108475752 GT ./. chr2 108475834 . G . . LowGQX END=108476011 GT ./. chr2 108476177 . G . . LowGQX END=108476302 GT ./. chr2 108477190 . T . . LowGQX END=108477384 GT ./. chr2 108477618 . C . . LowGQX END=108477788 GT ./. chr2 108478049 . G . . LowGQX END=108478197 GT ./. chr2 108479137 . G . . LowGQX END=108479326 GT ./. chr2 108479343 . T . . LowGQX END=108479497 GT ./. chr2 108482614 . T . . LowGQX END=108482782 GT ./. chr2 108484130 . C . . LowGQX END=108484298 GT ./. chr2 108486277 . A . . LowGQX END=108486436 GT ./. chr2 108487160 . G . . LowGQX END=108489385 GT ./. chr2 108496423 . G . . LowGQX END=108496564 GT ./. chr2 108499056 . A . . LowGQX END=108499396 GT ./. chr2 108499585 . A . . LowGQX END=108499685 GT ./. chr2 108507132 . T . . LowGQX END=108507232 GT ./. chr2 108604610 . A . . LowGQX END=108604792 GT ./. chr2 108608560 . A . . LowGQX END=108608678 GT ./. chr2 108609426 . A . . LowGQX END=108609586 GT ./. chr2 108614292 . A . . LowGQX END=108614445 GT ./. chr2 108618351 . A . . LowGQX END=108618499 GT ./. chr2 108622503 . A . . LowGQX END=108622661 GT ./. chr2 108624919 . A . . LowGQX END=108625141 GT ./. chr2 108626686 . A . . LowGQX END=108627320 GT ./. chr2 108863649 . C . . LowGQX END=108863849 GT ./. chr2 108868819 . A . . LowGQX END=108868952 GT ./. chr2 108869799 . A . . LowGQX END=108869959 GT ./. chr2 108872026 . A . . LowGQX END=108872157 GT ./. chr2 108875118 . A . . LowGQX END=108875288 GT ./. chr2 108875421 . G . . LowGQX END=108875603 GT ./. chr2 108877023 . G . . LowGQX END=108877137 GT ./. chr2 108881279 . A . . LowGQX END=108881464 GT ./. chr2 108881693 . A . . LowGQX END=108881810 GT ./. chr2 108910122 . C . . LowGQX END=108910277 GT ./. chr2 108910683 . A . . LowGQX END=108910813 GT ./. chr2 108915020 . T . . LowGQX END=108915171 GT ./. chr2 108917251 . G . . LowGQX END=108917394 GT ./. chr2 108921028 . A . . LowGQX END=108921159 GT ./. chr2 108921626 . A . . LowGQX END=108921726 GT ./. chr2 108921869 . A . . LowGQX END=108922126 GT ./. chr2 108924806 . A . . LowGQX END=108924923 GT ./. chr2 108994792 . T . . LowGQX END=108994965 GT ./. chr2 108998216 . A . . LowGQX END=108998386 GT ./. chr2 108998839 . A . . LowGQX END=108998941 GT ./. chr2 108999547 . A . . LowGQX END=108999727 GT ./. chr2 108999870 . A . . LowGQX END=108999970 GT ./. chr2 109002646 . A . . LowGQX END=109002846 GT ./. chr2 109003774 . A . . LowGQX END=109003891 GT ./. chr2 109065688 . C . . LowGQX END=109065788 GT ./. chr2 109066068 . G . . LowGQX END=109066168 GT ./. chr2 109067477 . C . . LowGQX END=109067577 GT ./. chr2 109068783 . T . . LowGQX END=109068939 GT ./. chr2 109085374 . T . . LowGQX END=109085543 GT ./. chr2 109086105 . A . . LowGQX END=109088575 GT ./. chr2 109089211 . T . . LowGQX END=109089370 GT ./. chr2 109091989 . A . . LowGQX END=109092309 GT ./. chr2 109098151 . A . . LowGQX END=109098275 GT ./. chr2 109098741 . A . . LowGQX END=109098910 GT ./. chr2 109099466 . A . . LowGQX END=109099625 GT ./. chr2 109100573 . T . . LowGQX END=109100770 GT ./. chr2 109102090 . A . . LowGQX END=109102195 GT ./. chr2 109102276 . T . . LowGQX END=109102376 GT ./. chr2 109102846 . A . . LowGQX END=109102946 GT ./. chr2 109102965 . A . . LowGQX END=109103107 GT ./. chr2 109104153 . A . . LowGQX END=109104323 GT ./. chr2 109106292 . A . . LowGQX END=109106473 GT ./. chr2 109109027 . A . . LowGQX END=109109249 GT ./. chr2 109111745 . A . . LowGQX END=109111944 GT ./. chr2 109113424 . A . . LowGQX END=109113568 GT ./. chr2 109115936 . T . . LowGQX END=109116276 GT ./. chr2 109124002 . T . . LowGQX END=109124102 GT ./. chr2 109150925 . C . . LowGQX END=109151085 GT ./. chr2 109223658 . T . . LowGQX END=109223758 GT ./. chr2 109237810 . T . . LowGQX END=109237918 GT ./. chr2 109271530 . G . . LowGQX END=109271729 GT ./. chr2 109276060 . G . . LowGQX END=109276249 GT ./. chr2 109278641 . C . . LowGQX END=109278741 GT ./. chr2 109287221 . G . . LowGQX END=109287321 GT ./. chr2 109288738 . G . . LowGQX END=109288904 GT ./. chr2 109289303 . A . . LowGQX END=109289488 GT ./. chr2 109292332 . A . . LowGQX END=109292487 GT ./. chr2 109292999 . T . . LowGQX END=109293159 GT ./. chr2 109294410 . T . . LowGQX END=109294563 GT ./. chr2 109297088 . A . . LowGQX END=109297239 GT ./. chr2 109300339 . A . . LowGQX END=109300509 GT ./. chr2 109336012 . G . . LowGQX END=109336186 GT ./. chr2 109345522 . T . . LowGQX END=109345707 GT ./. chr2 109347144 . G . . LowGQX END=109347393 GT ./. chr2 109347727 . A . . LowGQX END=109347982 GT ./. chr2 109351937 . A . . LowGQX END=109352270 GT ./. chr2 109352509 . T . . LowGQX END=109352757 GT ./. chr2 109356894 . A . . LowGQX END=109357189 GT ./. chr2 109363116 . T . . LowGQX END=109363309 GT ./. chr2 109365325 . A . . LowGQX END=109365637 GT ./. chr2 109367669 . G . . LowGQX END=109368211 GT ./. chr2 109368276 . C . . LowGQX END=109368492 GT ./. chr2 109369403 . T . . LowGQX END=109369667 GT ./. chr2 109369831 . T . . LowGQX END=109370071 GT ./. chr2 109370230 . A . . LowGQX END=109370479 GT ./. chr2 109371310 . T . . LowGQX END=109371767 GT ./. chr2 109374818 . C . . LowGQX END=109375056 GT ./. chr2 109378506 . T . . LowGQX END=109378724 GT ./. chr2 109379642 . T . . LowGQX END=109384896 GT ./. chr2 109388106 . C . . LowGQX END=109388379 GT ./. chr2 109388894 . G . . LowGQX END=109389089 GT ./. chr2 109389273 . G . . LowGQX END=109389554 GT ./. chr2 109392137 . T . . LowGQX END=109392444 GT ./. chr2 109393535 . T . . LowGQX END=109393739 GT ./. chr2 109397674 . A . . LowGQX END=109397937 GT ./. chr2 109398533 . T . . LowGQX END=109398909 GT ./. chr2 109398933 . A . . LowGQX END=109399370 GT ./. chr2 109400001 . C . . LowGQX END=109400409 GT ./. chr2 109403216 . C . . LowGQX END=109403427 GT ./. chr2 109404416 . T . . LowGQX END=109404567 GT ./. chr2 109405306 . A . . LowGQX END=109405425 GT ./. chr2 109407921 . T . . LowGQX END=109408084 GT ./. chr2 109408089 . A . . LowGQX END=109408261 GT ./. chr2 109410994 . A . . LowGQX END=109411194 GT ./. chr2 109414882 . A . . LowGQX END=109415045 GT ./. chr2 109421343 . A . . LowGQX END=109421467 GT ./. chr2 109429076 . C . . LowGQX END=109429176 GT ./. chr2 109429274 . A . . LowGQX END=109429386 GT ./. chr2 109432395 . A . . LowGQX END=109432564 GT ./. chr2 109455639 . A . . LowGQX END=109455760 GT ./. chr2 109463182 . T . . LowGQX END=109463389 GT ./. chr2 109473228 . A . . LowGQX END=109473429 GT ./. chr2 109489905 . A . . LowGQX END=109490048 GT ./. chr2 109492542 . A . . LowGQX END=109492712 GT ./. chr2 109513312 . C . . LowGQX END=109513737 GT ./. chr2 109522713 . T . . LowGQX END=109522876 GT ./. chr2 109524265 . T . . LowGQX END=109524527 GT ./. chr2 109526865 . C . . LowGQX END=109527040 GT ./. chr2 109527179 . C . . LowGQX END=109527580 GT ./. chr2 109529083 . A . . LowGQX END=109529272 GT ./. chr2 109539773 . G . . LowGQX END=109539961 GT ./. chr2 109545603 . G . . LowGQX END=109545644;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:6:60 chr2 109545645 . T . . LowGQX END=109545744;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 109545745 . G . . LowGQX END=109545887 GT ./. chr2 109546525 . A . . LowGQX END=109546750 GT ./. chr2 109547355 . C . . LowGQX END=109547522 GT ./. chr2 109745339 . C . . LowGQX END=109746577 GT ./. chr2 109964129 . G . . LowGQX END=109964406 GT ./. chr2 109988040 . A . . LowGQX END=109988140 GT ./. chr2 110015045 . G . . LowGQX END=110015400 GT ./. chr2 110035994 . G . . LowGQX END=110036099 GT ./. chr2 110048926 . C . . LowGQX END=110049128 GT ./. chr2 110053348 . G . . LowGQX END=110053603 GT ./. chr2 110065614 . C . . LowGQX END=110065954 GT ./. chr2 110107060 . G . . LowGQX END=110107393 GT ./. chr2 110259078 . A . . LowGQX END=110259249 GT ./. chr2 110301658 . G . . LowGQX END=110301948 GT ./. chr2 110303001 . C . . LowGQX END=110303120 GT ./. chr2 110303622 . C . . LowGQX END=110303817 GT ./. chr2 110310662 . G . . LowGQX END=110310799 GT ./. chr2 110321939 . C . . LowGQX END=110322114 GT ./. chr2 110323338 . A . . LowGQX END=110323439 GT ./. chr2 110325360 . A . . LowGQX END=110325556 GT ./. chr2 110332156 . A . . LowGQX END=110332347 GT ./. chr2 110342701 . A . . LowGQX END=110342901 GT ./. chr2 110343296 . A . . LowGQX END=110343418 GT ./. chr2 110350554 . A . . LowGQX END=110350711 GT ./. chr2 110370641 . G . . LowGQX END=110370741 GT ./. chr2 110371280 . C . . LowGQX END=110371440 GT ./. chr2 110372065 . G . . LowGQX END=110373647 GT ./. chr2 110551970 . C . . LowGQX END=110552129 GT ./. chr2 110559284 . G . . LowGQX END=110559444 GT ./. chr2 110561007 . A . . LowGQX END=110561166 GT ./. chr2 110561533 . T . . LowGQX END=110561711 GT ./. chr2 110565678 . T . . LowGQX END=110566048 GT ./. chr2 110566325 . A . . LowGQX END=110566524 GT ./. chr2 110571034 . C . . LowGQX END=110571235 GT ./. chr2 110577267 . T . . LowGQX END=110577367 GT ./. chr2 110579409 . A . . LowGQX END=110579759 GT ./. chr2 110581786 . A . . LowGQX END=110581983 GT ./. chr2 110582051 . T . . LowGQX END=110582242 GT ./. chr2 110582405 . A . . LowGQX END=110582574 GT ./. chr2 110583430 . G . . LowGQX END=110583614 GT ./. chr2 110583845 . A . . LowGQX END=110584018 GT ./. chr2 110584255 . T . . LowGQX END=110584427 GT ./. chr2 110585356 . C . . LowGQX END=110585551 GT ./. chr2 110585579 . G . . LowGQX END=110585734 GT ./. chr2 110588861 . T . . LowGQX END=110589032 GT ./. chr2 110590375 . C . . LowGQX END=110590543 GT ./. chr2 110592511 . C . . LowGQX END=110592672 GT ./. chr2 110593383 . A . . LowGQX END=110595623 GT ./. chr2 110602647 . T . . LowGQX END=110602822 GT ./. chr2 110605314 . T . . LowGQX END=110605654 GT ./. chr2 110613347 . T . . LowGQX END=110613507 GT ./. chr2 110656293 . T . . LowGQX END=110656490 GT ./. chr2 110660828 . A . . LowGQX END=110661017 GT ./. chr2 110661378 . A . . LowGQX END=110661567 GT ./. chr2 110663353 . T . . LowGQX END=110663513 GT ./. chr2 110671913 . T . . LowGQX END=110672073 GT ./. chr2 110673477 . T . . LowGQX END=110673650 GT ./. chr2 110674052 . A . . LowGQX END=110674234 GT ./. chr2 110676989 . A . . LowGQX END=110677149 GT ./. chr2 110843194 . A . . LowGQX END=110843354 GT ./. chr2 110845106 . A . . LowGQX END=110845277 GT ./. chr2 110849167 . T . . LowGQX END=110849350 GT ./. chr2 110855019 . A . . LowGQX END=110855182 GT ./. chr2 110873212 . C . . LowGQX END=110873372 GT ./. chr2 110881317 . T . . LowGQX END=110881692 GT ./. chr2 110882795 . C . . LowGQX END=110882901 GT ./. chr2 110883146 . G . . LowGQX END=110883310 GT ./. chr2 110886712 . A . . LowGQX END=110886888 GT ./. chr2 110889205 . C . . LowGQX END=110889420 GT ./. chr2 110901068 . C . . LowGQX END=110901270 GT ./. chr2 110902019 . T . . LowGQX END=110902198 GT ./. chr2 110904279 . A . . LowGQX END=110904464 GT ./. chr2 110905442 . C . . LowGQX END=110905655 GT ./. chr2 110907708 . T . . LowGQX END=110907885 GT ./. chr2 110917653 . A . . LowGQX END=110917884 GT ./. chr2 110919129 . T . . LowGQX END=110919326 GT ./. chr2 110920574 . G . . LowGQX END=110920764 GT ./. chr2 110922046 . T . . LowGQX END=110922359 GT ./. chr2 110922578 . C . . LowGQX END=110922784 GT ./. chr2 110925978 . A . . LowGQX END=110926182 GT ./. chr2 110927332 . T . . LowGQX END=110927627 GT ./. chr2 110935931 . A . . LowGQX END=110936176 GT ./. chr2 110937150 . T . . LowGQX END=110937313 GT ./. chr2 110958947 . T . . LowGQX END=110959123 GT ./. chr2 110959971 . A . . LowGQX END=110960071 GT ./. chr2 110962426 . C . . LowGQX END=110962597 GT ./. chr2 111209452 . A . . LowGQX END=111209612 GT ./. chr2 111212396 . C . . LowGQX END=111212578 GT ./. chr2 111213011 . C . . LowGQX END=111213180 GT ./. chr2 111214530 . T . . LowGQX END=111214690 GT ./. chr2 111223089 . T . . LowGQX END=111223249 GT ./. chr2 111225650 . G . . LowGQX END=111225832 GT ./. chr2 111230162 . G . . LowGQX END=111230356 GT ./. chr2 111273096 . G . . LowGQX END=111273256 GT ./. chr2 111281000 . G . . LowGQX END=111281340 GT ./. chr2 111283840 . A . . LowGQX END=111284019 GT ./. chr2 111290011 . C . . LowGQX END=111290171 GT ./. chr2 111291029 . A . . LowGQX END=111293269 GT ./. chr2 111293930 . G . . LowGQX END=111294091 GT ./. chr2 111296120 . A . . LowGQX END=111296279 GT ./. chr2 111297589 . A . . LowGQX END=111297770 GT ./. chr2 111300873 . A . . LowGQX END=111301028 GT ./. chr2 111301100 . C . . LowGQX END=111301295 GT ./. chr2 111302235 . A . . LowGQX END=111302414 GT ./. chr2 111302613 . A . . LowGQX END=111302786 GT ./. chr2 111303048 . A . . LowGQX END=111303237 GT ./. chr2 111304088 . T . . LowGQX END=111304257 GT ./. chr2 111304409 . T . . LowGQX END=111304600 GT ./. chr2 111304668 . A . . LowGQX END=111304865 GT ./. chr2 111306897 . T . . LowGQX END=111307247 GT ./. chr2 111309238 . A . . LowGQX END=111309395 GT ./. chr2 111315426 . T . . LowGQX END=111315627 GT ./. chr2 111320136 . C . . LowGQX END=111320337 GT ./. chr2 111320607 . T . . LowGQX END=111320977 GT ./. chr2 111324930 . C . . LowGQX END=111325108 GT ./. chr2 111325488 . T . . LowGQX END=111325655 GT ./. chr2 111327158 . T . . LowGQX END=111327318 GT ./. chr2 111334457 . C . . LowGQX END=111334616 GT ./. chr2 111395539 . T . . LowGQX END=111395739 GT ./. chr2 111397317 . A . . LowGQX END=111397428 GT ./. chr2 111397478 . A . . LowGQX END=111397578 GT ./. chr2 111398609 . A . . LowGQX END=111398785 GT ./. chr2 111398882 . G . . LowGQX END=111399044 GT ./. chr2 111399217 . A . . LowGQX END=111399383 GT ./. chr2 111399694 . A . . LowGQX END=111399814 GT ./. chr2 111406809 . A . . LowGQX END=111406989 GT ./. chr2 111408121 . A . . LowGQX END=111408364 GT ./. chr2 111411007 . C . . LowGQX END=111411107 GT ./. chr2 111413314 . A . . LowGQX END=111413496 GT ./. chr2 111414604 . T . . LowGQX END=111414704 GT ./. chr2 111415061 . C . . LowGQX END=111415225 GT ./. chr2 111415985 . A . . LowGQX END=111416100 GT ./. chr2 111416189 . A . . LowGQX END=111416322 GT ./. chr2 111417535 . T . . LowGQX END=111417635 GT ./. chr2 111419155 . T . . LowGQX END=111419421 GT ./. chr2 111423838 . A . . LowGQX END=111424028 GT ./. chr2 111425096 . A . . LowGQX END=111425285 GT ./. chr2 111425351 . A . . LowGQX END=111425451 GT ./. chr2 111427028 . A . . LowGQX END=111427133 GT ./. chr2 111428074 . A . . LowGQX END=111428174 GT ./. chr2 111430236 . A . . LowGQX END=111430437 GT ./. chr2 111431661 . A . . LowGQX END=111431804 GT ./. chr2 111431863 . T . . LowGQX END=111431963 GT ./. chr2 111435450 . G . . LowGQX END=111435610 GT ./. chr2 111525955 . A . . LowGQX END=111526055 GT ./. chr2 111542301 . A . . LowGQX END=111542401 GT ./. chr2 111551221 . T . . LowGQX END=111551321 GT ./. chr2 111551651 . A . . LowGQX END=111551754 GT ./. chr2 111556185 . A . . LowGQX END=111556304 GT ./. chr2 111556585 . C . . LowGQX END=111556685 GT ./. chr2 111559216 . C . . LowGQX END=111559316 GT ./. chr2 111562838 . A . . LowGQX END=111562975 GT ./. chr2 111598916 . C . . LowGQX END=111599016 GT ./. chr2 111644334 . T . . LowGQX END=111644434 GT ./. chr2 111666364 . A . . LowGQX END=111666485 GT ./. chr2 111691064 . A . . LowGQX END=111691222 GT ./. chr2 111721196 . A . . LowGQX END=111721296 GT ./. chr2 111744683 . A . . LowGQX END=111744797 GT ./. chr2 111753468 . A . . LowGQX END=111753584 GT ./. chr2 111789198 . G . . LowGQX END=111789298 GT ./. chr2 111806781 . T . . LowGQX END=111806881 GT ./. chr2 111850440 . A . . LowGQX END=111850546 GT ./. chr2 111851020 . A . . LowGQX END=111851120 GT ./. chr2 111875192 . G . . LowGQX END=111875394 GT ./. chr2 111881321 . A . . LowGQX END=111881719 GT ./. chr2 111886203 . G . . LowGQX END=111886329 GT ./. chr2 111887647 . G . . LowGQX END=111887813 GT ./. chr2 111899879 . A . . LowGQX END=111899979 GT ./. chr2 111902022 . T . . LowGQX END=111902122 GT ./. chr2 111907619 . A . . LowGQX END=111907848 GT ./. chr2 111909364 . A . . LowGQX END=111909464 GT ./. chr2 111911321 . T . . LowGQX END=111911421 GT ./. chr2 111918956 . T . . LowGQX END=111919056 GT ./. chr2 111921708 . A . . LowGQX END=111921811 GT ./. chr2 111995633 . T . . LowGQX END=111996087 GT ./. chr2 112524507 . T . . LowGQX END=112524607 GT ./. chr2 112526866 . G . . LowGQX END=112527035 GT ./. chr2 112529855 . A . . LowGQX END=112530055 GT ./. chr2 112534384 . A . . LowGQX END=112534668 GT ./. chr2 112536189 . A . . LowGQX END=112536350 GT ./. chr2 112537813 . A . . LowGQX END=112537970 GT ./. chr2 112539913 . T . . LowGQX END=112540087 GT ./. chr2 112541458 . A . . LowGQX END=112541558 GT ./. chr2 112541837 . T . . LowGQX END=112541989 GT ./. chr2 112542894 . A . . LowGQX END=112543057 GT ./. chr2 112545738 . C . . LowGQX END=112545905 GT ./. chr2 112549926 . C . . LowGQX END=112550135 GT ./. chr2 112551632 . A . . LowGQX END=112551732 GT ./. chr2 112551806 . T . . LowGQX END=112551906 GT ./. chr2 112552332 . T . . LowGQX END=112552484 GT ./. chr2 112558301 . G . . LowGQX END=112558522 GT ./. chr2 112559939 . T . . LowGQX END=112560095 GT ./. chr2 112561017 . A . . LowGQX END=112561172 GT ./. chr2 112561249 . G . . LowGQX END=112561419 GT ./. chr2 112563375 . T . . LowGQX END=112563526 GT ./. chr2 112566451 . T . . LowGQX END=112566821 GT ./. chr2 112572934 . G . . LowGQX END=112573221 GT ./. chr2 112576374 . C . . LowGQX END=112576538 GT ./. chr2 112578743 . A . . LowGQX END=112579033 GT ./. chr2 112579986 . T . . LowGQX END=112580180 GT ./. chr2 112582529 . A . . LowGQX END=112582629 GT ./. chr2 112582677 . G . . LowGQX END=112582777 GT ./. chr2 112583344 . A . . LowGQX END=112583444 GT ./. chr2 112588861 . A . . LowGQX END=112589014 GT ./. chr2 112590793 . T . . LowGQX END=112590893 GT ./. chr2 112592179 . A . . LowGQX END=112592452 GT ./. chr2 112596003 . A . . LowGQX END=112596103 GT ./. chr2 112600987 . A . . LowGQX END=112601179 GT ./. chr2 112604696 . T . . LowGQX END=112604796 GT ./. chr2 112605300 . A . . LowGQX END=112605445 GT ./. chr2 112608311 . A . . LowGQX END=112608490 GT ./. chr2 112614174 . T . . LowGQX END=112614274 GT ./. chr2 112614369 . T . . LowGQX END=112614469 GT ./. chr2 112615881 . A . . LowGQX END=112615981 GT ./. chr2 112619964 . A . . LowGQX END=112620178 GT ./. chr2 112621250 . A . . LowGQX END=112621475 GT ./. chr2 112622338 . C . . LowGQX END=112622531 GT ./. chr2 112625587 . G . . LowGQX END=112625687 GT ./. chr2 112630199 . A . . LowGQX END=112630299 GT ./. chr2 112630833 . T . . LowGQX END=112630988 GT ./. chr2 112631166 . A . . LowGQX END=112631318 GT ./. chr2 112636364 . T . . LowGQX END=112636551 GT ./. chr2 112638188 . A . . LowGQX END=112638405 GT ./. chr2 112656253 . G . . LowGQX END=112656425 GT ./. chr2 112686646 . G . . LowGQX END=112687159 GT ./. chr2 112702486 . G . . LowGQX END=112702689 GT ./. chr2 112704920 . G . . LowGQX END=112705196 GT ./. chr2 112722717 . A . . LowGQX END=112722906 GT ./. chr2 112725663 . T . . LowGQX END=112725881 GT ./. chr2 112732815 . C . . LowGQX END=112733101 GT ./. chr2 112740368 . T . . LowGQX END=112740622 GT ./. chr2 112751777 . G . . LowGQX END=112752090 GT ./. chr2 112754717 . C . . LowGQX END=112755105 GT ./. chr2 112758727 . C . . LowGQX END=112758915 GT ./. chr2 112760618 . A . . LowGQX END=112760816 GT ./. chr2 112761430 . G . . LowGQX END=112761613 GT ./. chr2 112765909 . C . . LowGQX END=112766157 GT ./. chr2 112767474 . G . . LowGQX END=112767695 GT ./. chr2 112776883 . C . . LowGQX END=112777151 GT ./. chr2 112778157 . T . . LowGQX END=112778257 GT ./. chr2 112778948 . A . . LowGQX END=112779210 GT ./. chr2 112779784 . C . . LowGQX END=112780024 GT ./. chr2 112780066 . G . . LowGQX END=112780166 GT ./. chr2 112785877 . A . . LowGQX END=112786493 GT ./. chr2 112813146 . C . . LowGQX END=112813336 GT ./. chr2 112817482 . T . . LowGQX END=112817635 GT ./. chr2 112821735 . A . . LowGQX END=112821835 GT ./. chr2 112824511 . A . . LowGQX END=112824701 GT ./. chr2 112832465 . G . . LowGQX END=112832617 GT ./. chr2 112834765 . T . . LowGQX END=112834865 GT ./. chr2 112838615 . C . . LowGQX END=112838715 GT ./. chr2 112838910 . A . . LowGQX END=112839098 GT ./. chr2 112843580 . A . . LowGQX END=112843684 GT ./. chr2 112847199 . C . . LowGQX END=112847299 GT ./. chr2 112849275 . T . . LowGQX END=112849375 GT ./. chr2 112854569 . T . . LowGQX END=112854732 GT ./. chr2 112854738 . T . . LowGQX END=112854890 GT ./. chr2 112856170 . A . . LowGQX END=112856278 GT ./. chr2 112858127 . G . . LowGQX END=112858286 GT ./. chr2 112863506 . A . . LowGQX END=112863666 GT ./. chr2 112865342 . G . . LowGQX END=112865442 GT ./. chr2 112870442 . C . . LowGQX END=112870542 GT ./. chr2 112873641 . T . . LowGQX END=112873741 GT ./. chr2 112896160 . C . . LowGQX END=112896321 GT ./. chr2 112917251 . A . . LowGQX END=112917441 GT ./. chr2 112922576 . A . . LowGQX END=112922751 GT ./. chr2 112933289 . A . . LowGQX END=112933419 GT ./. chr2 112939314 . A . . LowGQX END=112939596 GT ./. chr2 112940366 . A . . LowGQX END=112940546 GT ./. chr2 112942776 . A . . LowGQX END=112942919 GT ./. chr2 112944709 . A . . LowGQX END=112945118 GT ./. chr2 112988404 . C . . LowGQX END=112988561 GT ./. chr2 112989414 . C . . LowGQX END=112989525 GT ./. chr2 112990834 . T . . LowGQX END=112990994 GT ./. chr2 112991696 . C . . LowGQX END=112991856 GT ./. chr2 112994138 . C . . LowGQX END=112994273 GT ./. chr2 112995891 . C . . LowGQX END=112996106 GT ./. chr2 113007759 . T . . LowGQX END=113007859 GT ./. chr2 113012414 . A . . LowGQX END=113012572 GT ./. chr2 113033538 . C . . LowGQX END=113033638 GT ./. chr2 113057425 . G . . LowGQX END=113057607 GT ./. chr2 113060805 . G . . LowGQX END=113060954 GT ./. chr2 113067461 . G . . LowGQX END=113067739 GT ./. chr2 113069380 . G . . LowGQX END=113069515 GT ./. chr2 113073996 . T . . LowGQX END=113074164 GT ./. chr2 113074797 . G . . LowGQX END=113074957 GT ./. chr2 113079332 . C . . LowGQX END=113079492 GT ./. chr2 113080225 . G . . LowGQX END=113080480 GT ./. chr2 113081728 . G . . LowGQX END=113082241 GT ./. chr2 113082540 . G . . LowGQX END=113082775 GT ./. chr2 113088581 . G . . LowGQX END=113090066 GT ./. chr2 113127722 . T . . LowGQX END=113127822 GT ./. chr2 113135558 . A . . LowGQX END=113135898 GT ./. chr2 113138400 . C . . LowGQX END=113138579 GT ./. chr2 113145529 . C . . LowGQX END=113147825 GT ./. chr2 113148490 . A . . LowGQX END=113148649 GT ./. chr2 113150683 . A . . LowGQX END=113150842 GT ./. chr2 113152194 . C . . LowGQX END=113152373 GT ./. chr2 113155437 . G . . LowGQX END=113155591 GT ./. chr2 113155675 . C . . LowGQX END=113155874 GT ./. chr2 113156799 . C . . LowGQX END=113156978 GT ./. chr2 113157167 . T . . LowGQX END=113157347 GT ./. chr2 113157612 . C . . LowGQX END=113157801 GT ./. chr2 113158693 . C . . LowGQX END=113158862 GT ./. chr2 113158984 . C . . LowGQX END=113159183 GT ./. chr2 113159243 . C . . LowGQX END=113159442 GT ./. chr2 113161471 . C . . LowGQX END=113161821 GT ./. chr2 113163812 . G . . LowGQX END=113163968 GT ./. chr2 113169996 . T . . LowGQX END=113170204 GT ./. chr2 113174769 . C . . LowGQX END=113174916 GT ./. chr2 113175189 . G . . LowGQX END=113175559 GT ./. chr2 113179505 . A . . LowGQX END=113179690 GT ./. chr2 113180073 . G . . LowGQX END=113180237 GT ./. chr2 113181746 . T . . LowGQX END=113181901 GT ./. chr2 113190885 . C . . LowGQX END=113191045 GT ./. chr2 113239890 . T . . LowGQX END=113240081 GT ./. chr2 113243484 . T . . LowGQX END=113243584 GT ./. chr2 113251718 . A . . LowGQX END=113251955 GT ./. chr2 113258781 . A . . LowGQX END=113258921 GT ./. chr2 113260487 . A . . LowGQX END=113260761 GT ./. chr2 113277857 . A . . LowGQX END=113278005 GT ./. chr2 113286256 . A . . LowGQX END=113286375 GT ./. chr2 113299686 . G . . LowGQX END=113299786 GT ./. chr2 113299972 . G . . LowGQX END=113300251 GT ./. chr2 113303319 . T . . LowGQX END=113303479 GT ./. chr2 113304587 . A . . LowGQX END=113304759 GT ./. chr2 113304996 . A . . LowGQX END=113305147 GT ./. chr2 113306802 . A . . LowGQX END=113306979 GT ./. chr2 113308441 . A . . LowGQX END=113308582 GT ./. chr2 113309350 . A . . LowGQX END=113309578 GT ./. chr2 113310220 . A . . LowGQX END=113310396 GT ./. chr2 113315465 . T . . LowGQX END=113315661 GT ./. chr2 113316868 . A . . LowGQX END=113317154 GT ./. chr2 113321939 . C . . LowGQX END=113322079 GT ./. chr2 113325542 . A . . LowGQX END=113325717 GT ./. chr2 113326321 . A . . LowGQX END=113326482 GT ./. chr2 113330137 . A . . LowGQX END=113330338 GT ./. chr2 113331137 . A . . LowGQX END=113331395 GT ./. chr2 113332422 . A . . LowGQX END=113333309 GT ./. chr2 113342176 . A . . LowGQX END=113342276 GT ./. chr2 113343549 . A . . LowGQX END=113343694 GT ./. chr2 113343775 . A . . LowGQX END=113344111 GT ./. chr2 113346405 . A . . LowGQX END=113346505 GT ./. chr2 113404404 . G . . LowGQX END=113404742 GT ./. chr2 113404899 . A . . LowGQX END=113405044 GT ./. chr2 113405223 . A . . LowGQX END=113405323 GT ./. chr2 113410277 . A . . LowGQX END=113410378 GT ./. chr2 113410449 . C . . LowGQX END=113410549 GT ./. chr2 113414604 . T . . LowGQX END=113414821 GT ./. chr2 113416400 . A . . LowGQX END=113416674 GT ./. chr2 113416779 . A . . LowGQX END=113417342 GT ./. chr2 113417962 . A . . LowGQX END=113418152 GT ./. chr2 113418712 . T . . LowGQX END=113418812 GT ./. chr2 113420439 . A . . LowGQX END=113420605 GT ./. chr2 113420709 . T . . LowGQX END=113420809 GT ./. chr2 113479069 . A . . LowGQX END=113479169 GT ./. chr2 113479382 . T . . LowGQX END=113479482 GT ./. chr2 113479562 . G . . LowGQX END=113479681 GT ./. chr2 113479758 . A . . LowGQX END=113479858 GT ./. chr2 113480071 . T . . LowGQX END=113480171 GT ./. chr2 113480270 . G . . LowGQX END=113480370 GT ./. chr2 113480655 . C . . LowGQX END=113480806 GT ./. chr2 113480970 . A . . LowGQX END=113481070 GT ./. chr2 113481288 . T . . LowGQX END=113481388 GT ./. chr2 113481637 . G . . LowGQX END=113481737 GT ./. chr2 113482357 . G . . LowGQX END=113482466 GT ./. chr2 113482734 . C . . LowGQX END=113482834 GT ./. chr2 113482958 . G . . LowGQX END=113483130 GT ./. chr2 113483791 . C . . LowGQX END=113483891 GT ./. chr2 113484235 . C . . LowGQX END=113484335 GT ./. chr2 113487193 . T . . LowGQX END=113487293 GT ./. chr2 113496398 . A . . LowGQX END=113496628 GT ./. chr2 113498393 . A . . LowGQX END=113498587 GT ./. chr2 113499958 . T . . LowGQX END=113500058 GT ./. chr2 113500265 . A . . LowGQX END=113500365 GT ./. chr2 113503995 . A . . LowGQX END=113504155 GT ./. chr2 113509842 . A . . LowGQX END=113510054 GT ./. chr2 113513552 . A . . LowGQX END=113514794 GT ./. chr2 113518266 . T . . LowGQX END=113518418 GT ./. chr2 113520064 . G . . LowGQX END=113520164 GT ./. chr2 113522108 . T . . LowGQX END=113522208 GT ./. chr2 113532642 . A . . LowGQX END=113532847 GT ./. chr2 113535562 . A . . LowGQX END=113535691 GT ./. chr2 113537051 . G . . LowGQX END=113537246 GT ./. chr2 113539179 . A . . LowGQX END=113539406 GT ./. chr2 113540268 . A . . LowGQX END=113540368 GT ./. chr2 113541275 . C . . LowGQX END=113541375 GT ./. chr2 113587887 . C . . LowGQX END=113588202 GT ./. chr2 113588818 . T . . LowGQX END=113589051 GT ./. chr2 113590188 . T . . LowGQX END=113590455 GT ./. chr2 113590900 . A . . LowGQX END=113591204 GT ./. chr2 113593092 . T . . LowGQX END=113593246 GT ./. chr2 113593709 . T . . LowGQX END=113593858 GT ./. chr2 113670528 . C . . LowGQX END=113670681 GT ./. chr2 113671351 . C . . LowGQX END=113671451 GT ./. chr2 113672754 . G . . LowGQX END=113672854 GT ./. chr2 113674704 . A . . LowGQX END=113674828 GT ./. chr2 113675210 . A . . LowGQX END=113675389 GT ./. chr2 113676136 . A . . LowGQX END=113676389 GT ./. chr2 113736194 . C . . LowGQX END=113736294 GT ./. chr2 113736796 . A . . LowGQX END=113736905 GT ./. chr2 113737584 . A . . LowGQX END=113737728 GT ./. chr2 113742415 . A . . LowGQX END=113742629 GT ./. chr2 113763404 . T . . LowGQX END=113763504 GT ./. chr2 113763549 . A . . LowGQX END=113763667 GT ./. chr2 113764173 . A . . LowGQX END=113764317 GT ./. chr2 113765407 . A . . LowGQX END=113765624 GT ./. chr2 113766071 . G . . LowGQX END=113766171 GT ./. chr2 113780249 . T . . LowGQX END=113780357 GT ./. chr2 113783678 . A . . LowGQX END=113783812 GT ./. chr2 113785478 . A . . LowGQX END=113785695 GT ./. chr2 113786514 . A . . LowGQX END=113786658 GT ./. chr2 113788623 . A . . LowGQX END=113788735 GT ./. chr2 113789231 . C . . LowGQX END=113789331 GT ./. chr2 113816940 . C . . LowGQX END=113817096 GT ./. chr2 113818378 . G . . LowGQX END=113818566 GT ./. chr2 113819650 . A . . LowGQX END=113819880 GT ./. chr2 113819979 . C . . LowGQX END=113820306 GT ./. chr2 113830282 . C . . LowGQX END=113830382 GT ./. chr2 113831899 . G . . LowGQX END=113831999 GT ./. chr2 113832206 . A . . LowGQX END=113832430 GT ./. chr2 113832727 . A . . LowGQX END=113832944 GT ./. chr2 113875545 . G . . LowGQX END=113875671 GT ./. chr2 113877584 . C . . LowGQX END=113877757 GT ./. chr2 113885201 . A . . LowGQX END=113885369 GT ./. chr2 113887102 . G . . LowGQX END=113887293 GT ./. chr2 113888571 . A . . LowGQX END=113888786 GT ./. chr2 113890182 . C . . LowGQX END=113890500 GT ./. chr2 113940032 . G . . LowGQX END=113941093 GT ./. chr2 113942532 . A . . LowGQX END=113942653 GT ./. chr2 113942930 . C . . LowGQX END=113943030 GT ./. chr2 113943198 . A . . LowGQX END=113943298 GT ./. chr2 113943342 . A . . LowGQX END=113943835 GT ./. chr2 113949955 . A . . LowGQX END=113950169 GT ./. chr2 113950616 . C . . LowGQX END=113950716 GT ./. chr2 113950833 . A . . LowGQX END=113950993 GT ./. chr2 113951149 . C . . LowGQX END=113951249 GT ./. chr2 113951374 . G . . LowGQX END=113951531 GT ./. chr2 113953276 . C . . LowGQX END=113953376 GT ./. chr2 113953722 . A . . LowGQX END=113953887 GT ./. chr2 113955062 . A . . LowGQX END=113955214 GT ./. chr2 113955322 . A . . LowGQX END=113955493 GT ./. chr2 113956315 . A . . LowGQX END=113956806 GT ./. chr2 113958733 . A . . LowGQX END=113958995 GT ./. chr2 113976109 . A . . LowGQX END=113976218 GT ./. chr2 113977618 . C . . LowGQX END=113977807 GT ./. chr2 113984653 . G . . LowGQX END=113984885 GT ./. chr2 113992970 . C . . LowGQX END=113993160 GT ./. chr2 113994177 . C . . LowGQX END=113994299 GT ./. chr2 113998984 . T . . LowGQX END=113999355 GT ./. chr2 113999534 . G . . LowGQX END=113999759 GT ./. chr2 114000216 . A . . LowGQX END=114000407 GT ./. chr2 114001953 . C . . LowGQX END=114002253 GT ./. chr2 114004280 . G . . LowGQX END=114004548 GT ./. chr2 114035836 . G . . LowGQX END=114036060 GT ./. chr2 114195423 . G . . LowGQX END=114195602 GT ./. chr2 114196557 . T . . LowGQX END=114196722 GT ./. chr2 114198922 . T . . LowGQX END=114199075 GT ./. chr2 114201291 . T . . LowGQX END=114201445 GT ./. chr2 114202537 . C . . LowGQX END=114202637 GT ./. chr2 114204980 . T . . LowGQX END=114205430 GT ./. chr2 114210696 . T . . LowGQX END=114210796 GT ./. chr2 114212287 . A . . LowGQX END=114212387 GT ./. chr2 114213090 . T . . LowGQX END=114213190 GT ./. chr2 114214601 . T . . LowGQX END=114214701 GT ./. chr2 114218224 . C . . LowGQX END=114218324 GT ./. chr2 114219979 . T . . LowGQX END=114220079 GT ./. chr2 114222699 . A . . LowGQX END=114222853 GT ./. chr2 114228589 . C . . LowGQX END=114228689 GT ./. chr2 114239670 . T . . LowGQX END=114239830 GT ./. chr2 114251319 . T . . LowGQX END=114251419 GT ./. chr2 114251489 . T . . LowGQX END=114251589 GT ./. chr2 114252654 . G . . LowGQX END=114252829 GT ./. chr2 114253152 . A . . LowGQX END=114253371 GT ./. chr2 114256832 . C . . LowGQX END=114258065 GT ./. chr2 114340536 . T . . LowGQX END=114340674 GT ./. chr2 114353692 . A . . LowGQX END=114353792 GT ./. chr2 114353887 . G . . LowGQX END=114354407 GT ./. chr2 114355042 . T . . LowGQX END=114355216 GT ./. chr2 114355960 . A . . LowGQX END=114356060 GT ./. chr2 114356153 . C . . LowGQX END=114356318 GT ./. chr2 114357555 . C . . LowGQX END=114357792 GT ./. chr2 114358295 . C . . LowGQX END=114358404 GT ./. chr2 114358758 . A . . LowGQX END=114358858 GT ./. chr2 114386182 . C . . LowGQX END=114386293 GT ./. chr2 114390490 . A . . LowGQX END=114390646 GT ./. chr2 114391720 . C . . LowGQX END=114391820 GT ./. chr2 114392555 . C . . LowGQX END=114392718 GT ./. chr2 114398418 . G . . LowGQX END=114398585 GT ./. chr2 114398929 . G . . LowGQX END=114399058 GT ./. chr2 114399295 . C . . LowGQX END=114399450 GT ./. chr2 114399555 . A . . LowGQX END=114399709 GT ./. chr2 114400660 . A . . LowGQX END=114400820 GT ./. chr2 114475340 . G . . LowGQX END=114475440 GT ./. chr2 114476699 . T . . LowGQX END=114476888 GT ./. chr2 114480677 . T . . LowGQX END=114480777 GT ./. chr2 114482923 . C . . LowGQX END=114483117 GT ./. chr2 114486976 . A . . LowGQX END=114487136 GT ./. chr2 114489144 . C . . LowGQX END=114489244 GT ./. chr2 114490912 . A . . LowGQX END=114491012 GT ./. chr2 114492157 . G . . LowGQX END=114492257 GT ./. chr2 114493345 . A . . LowGQX END=114493445 GT ./. chr2 114500253 . A . . LowGQX END=114500459 GT ./. chr2 114501281 . T . . LowGQX END=114501381 GT ./. chr2 114503836 . A . . LowGQX END=114503936 GT ./. chr2 114508000 . A . . LowGQX END=114508148 GT ./. chr2 114512740 . A . . LowGQX END=114512886 GT ./. chr2 114513027 . C . . LowGQX END=114513127 GT ./. chr2 114513393 . T . . LowGQX END=114513493 GT ./. chr2 114513857 . T . . LowGQX END=114514017 GT ./. chr2 114647769 . C . . LowGQX END=114647929 GT ./. chr2 114670667 . T . . LowGQX END=114670827 GT ./. chr2 114674459 . A . . LowGQX END=114674588 GT ./. chr2 114684920 . A . . LowGQX END=114685035 GT ./. chr2 114688876 . A . . LowGQX END=114688976 GT ./. chr2 114691804 . T . . LowGQX END=114691966 GT ./. chr2 114697534 . A . . LowGQX END=114697714 GT ./. chr2 114699741 . C . . LowGQX END=114699939 GT ./. chr2 114709053 . C . . LowGQX END=114709153 GT ./. chr2 114709295 . A . . LowGQX END=114709425 GT ./. chr2 114713192 . T . . LowGQX END=114713292 GT ./. chr2 114714935 . A . . LowGQX END=114715035 GT ./. chr2 115200336 . A . . LowGQX END=115200436 GT ./. chr2 115822309 . A . . LowGQX END=115822409 GT ./. chr2 115919460 . C . . LowGQX END=115919620 GT ./. chr2 115919721 . C . . LowGQX END=115919881 GT ./. chr2 115991440 . A . . LowGQX END=115991600 GT ./. chr2 116054823 . G . . LowGQX END=116054923 GT ./. chr2 116066813 . A . . LowGQX END=116066932 GT ./. chr2 116099682 . C . . LowGQX END=116099782 GT ./. chr2 116101391 . A . . LowGQX END=116101491 GT ./. chr2 116257084 . A . . LowGQX END=116257184 GT ./. chr2 116283462 . T . . LowGQX END=116283562 GT ./. chr2 116447240 . T . . LowGQX END=116447340 GT ./. chr2 116447407 . T . . LowGQX END=116447507 GT ./. chr2 116485390 . A . . LowGQX END=116485560 GT ./. chr2 116497313 . A . . LowGQX END=116497472 GT ./. chr2 116503660 . A . . LowGQX END=116503820 GT ./. chr2 116510748 . A . . LowGQX END=116510876 GT ./. chr2 116520066 . T . . LowGQX END=116520218 GT ./. chr2 116525871 . A . . LowGQX END=116525983 GT ./. chr2 116534780 . G . . LowGQX END=116534880 GT ./. chr2 116535337 . C . . LowGQX END=116535437 GT ./. chr2 116538388 . C . . LowGQX END=116538574 GT ./. chr2 116539902 . T . . LowGQX END=116540002 GT ./. chr2 116548655 . A . . LowGQX END=116548758 GT ./. chr2 116548848 . C . . LowGQX END=116548948 GT ./. chr2 116572367 . A . . LowGQX END=116572566 GT ./. chr2 116573229 . T . . LowGQX END=116573329 GT ./. chr2 116593731 . A . . LowGQX END=116593835 GT ./. chr2 116594063 . T . . LowGQX END=116594163 GT ./. chr2 116594237 . T . . LowGQX END=116594337 GT ./. chr2 116598313 . T . . LowGQX END=116598413 GT ./. chr2 116599785 . A . . LowGQX END=116599924 GT ./. chr2 118572347 . G . . LowGQX END=118572447 GT ./. chr2 118575018 . A . . LowGQX END=118575307 GT ./. chr2 118577223 . A . . LowGQX END=118577403 GT ./. chr2 118578735 . A . . LowGQX END=118578875 GT ./. chr2 118579224 . A . . LowGQX END=118579329 GT ./. chr2 118579436 . A . . LowGQX END=118579640 GT ./. chr2 118579721 . A . . LowGQX END=118579840 GT ./. chr2 118582103 . T . . LowGQX END=118582287 GT ./. chr2 118582514 . A . . LowGQX END=118582680 GT ./. chr2 118583021 . A . . LowGQX END=118583178 GT ./. chr2 118583843 . A . . LowGQX END=118583961 GT ./. chr2 118586504 . C . . LowGQX END=118586604 GT ./. chr2 118586863 . A . . LowGQX END=118587063 GT ./. chr2 118588156 . A . . LowGQX END=118588336 GT ./. chr2 118677896 . C . . LowGQX END=118677996 GT ./. chr2 118688611 . A . . LowGQX END=118688729 GT ./. chr2 118693064 . A . . LowGQX END=118693164 GT ./. chr2 118694246 . T . . LowGQX END=118694346 GT ./. chr2 118696597 . G . . LowGQX END=118696697 GT ./. chr2 118698763 . A . . LowGQX END=118698876 GT ./. chr2 118701582 . T . . LowGQX END=118701682 GT ./. chr2 118702292 . C . . LowGQX END=118702392 GT ./. chr2 118703082 . G . . LowGQX END=118703182 GT ./. chr2 118704373 . T . . LowGQX END=118704473 GT ./. chr2 118705672 . A . . LowGQX END=118705772 GT ./. chr2 118706885 . T . . LowGQX END=118706985 GT ./. chr2 118709931 . G . . LowGQX END=118710031 GT ./. chr2 118715939 . A . . LowGQX END=118716060 GT ./. chr2 118731478 . A . . LowGQX END=118731578 GT ./. chr2 118732402 . C . . LowGQX END=118732502 GT ./. chr2 118732761 . C . . LowGQX END=118732861 GT ./. chr2 118735539 . T . . LowGQX END=118735639 GT ./. chr2 118743543 . A . . LowGQX END=118743648 GT ./. chr2 118753001 . G . . LowGQX END=118753101 GT ./. chr2 118753838 . A . . LowGQX END=118753941 GT ./. chr2 118758395 . A . . LowGQX END=118758511 GT ./. chr2 118764236 . A . . LowGQX END=118764396 GT ./. chr2 118766119 . A . . LowGQX END=118766237 GT ./. chr2 118771528 . A . . LowGQX END=118771740 GT ./. chr2 118854131 . C . . LowGQX END=118854379 GT ./. chr2 118860771 . A . . LowGQX END=118860900 GT ./. chr2 118864311 . A . . LowGQX END=118864482 GT ./. chr2 118864664 . A . . LowGQX END=118864768 GT ./. chr2 118865785 . T . . LowGQX END=118865947 GT ./. chr2 119591422 . G . . LowGQX END=119591732 GT ./. chr2 119600512 . G . . LowGQX END=119600833 GT ./. chr2 119603870 . T . . LowGQX END=119604753 GT ./. chr2 119699875 . C . . LowGQX END=119699976 GT ./. chr2 119726734 . A . . LowGQX END=119726840 GT ./. chr2 119727688 . A . . LowGQX END=119727917 GT ./. chr2 119728983 . C . . LowGQX END=119729143 GT ./. chr2 119731853 . C . . LowGQX END=119732170 GT ./. chr2 119735020 . A . . LowGQX END=119735120 GT ./. chr2 119735402 . A . . LowGQX END=119735514 GT ./. chr2 119738933 . T . . LowGQX END=119739086 GT ./. chr2 119739105 . T . . LowGQX END=119739265 GT ./. chr2 119739730 . A . . LowGQX END=119739833 GT ./. chr2 119739906 . G . . LowGQX END=119740006 GT ./. chr2 119748138 . C . . LowGQX END=119748238 GT ./. chr2 119749293 . T . . LowGQX END=119749511 GT ./. chr2 119749981 . A . . LowGQX END=119750081 GT ./. chr2 119750698 . A . . LowGQX END=119750879 GT ./. chr2 119751900 . G . . LowGQX END=119752099 GT ./. chr2 119914376 . C . . LowGQX END=119914560 GT ./. chr2 119915160 . A . . LowGQX END=119915851 GT ./. chr2 119988550 . T . . LowGQX END=119988650 GT ./. chr2 120003063 . A . . LowGQX END=120003567 GT ./. chr2 120005253 . A . . LowGQX END=120005785 GT ./. chr2 120012258 . A . . LowGQX END=120012427 GT ./. chr2 120015032 . G . . LowGQX END=120015222 GT ./. chr2 120020631 . A . . LowGQX END=120020917 GT ./. chr2 120020943 . G . . LowGQX END=120021043 GT ./. chr2 120059986 . A . . LowGQX END=120060137 GT ./. chr2 120069189 . C . . LowGQX END=120069289 GT ./. chr2 120075011 . A . . LowGQX END=120075111 GT ./. chr2 120078646 . T . . LowGQX END=120078858 GT ./. chr2 120097401 . A . . LowGQX END=120097548 GT ./. chr2 120124000 . C . . LowGQX END=120124100 GT ./. chr2 120124537 . T . . LowGQX END=120124697 GT ./. chr2 120124912 . G . . LowGQX END=120125105 GT ./. chr2 120125141 . C . . LowGQX END=120125241 GT ./. chr2 120125452 . C . . LowGQX END=120125552 GT ./. chr2 120125762 . A . . LowGQX END=120125884 GT ./. chr2 120128298 . T . . LowGQX END=120128398 GT ./. chr2 120129808 . C . . LowGQX END=120129908 GT ./. chr2 120187481 . C . . LowGQX END=120187581 GT ./. chr2 120187911 . T . . LowGQX END=120188011 GT ./. chr2 120189381 . C . . LowGQX END=120189541 GT ./. chr2 120194463 . A . . LowGQX END=120195019 GT ./. chr2 120197691 . T . . LowGQX END=120197836 GT ./. chr2 120199105 . G . . LowGQX END=120199205 GT ./. chr2 120204333 . A . . LowGQX END=120204464 GT ./. chr2 120206261 . T . . LowGQX END=120206361 GT ./. chr2 120209571 . A . . LowGQX END=120209671 GT ./. chr2 120210844 . C . . LowGQX END=120210944 GT ./. chr2 120219421 . A . . LowGQX END=120219579 GT ./. chr2 120221697 . A . . LowGQX END=120221834 GT ./. chr2 120223363 . A . . LowGQX END=120223465 GT ./. chr2 120231027 . A . . LowGQX END=120231135 GT ./. chr2 120236385 . A . . LowGQX END=120236497 GT ./. chr2 120252002 . A . . LowGQX END=120252127 GT ./. chr2 120281658 . T . . LowGQX END=120281817 GT ./. chr2 120303707 . A . . LowGQX END=120303847 GT ./. chr2 120306660 . G . . LowGQX END=120306762 GT ./. chr2 120317258 . C . . LowGQX END=120317358 GT ./. chr2 120317503 . G . . LowGQX END=120317603 GT ./. chr2 120319539 . A . . LowGQX END=120319691 GT ./. chr2 120330083 . A . . LowGQX END=120330183 GT ./. chr2 120344694 . G . . LowGQX END=120344799 GT ./. chr2 120358793 . G . . LowGQX END=120358954 GT ./. chr2 120362187 . A . . LowGQX END=120362371 GT ./. chr2 120362450 . A . . LowGQX END=120362566 GT ./. chr2 120362755 . A . . LowGQX END=120362868 GT ./. chr2 120366072 . C . . LowGQX END=120366172 GT ./. chr2 120369224 . C . . LowGQX END=120369377 GT ./. chr2 120373185 . A . . LowGQX END=120373288 GT ./. chr2 120383157 . A . . LowGQX END=120383267 GT ./. chr2 120385227 . A . . LowGQX END=120385365 GT ./. chr2 120387442 . A . . LowGQX END=120387542 GT ./. chr2 120388144 . A . . LowGQX END=120388256 GT ./. chr2 120388341 . A . . LowGQX END=120388541 GT ./. chr2 120395833 . A . . LowGQX END=120395996 GT ./. chr2 120397353 . A . . LowGQX END=120397453 GT ./. chr2 120404531 . C . . LowGQX END=120404631 GT ./. chr2 120405992 . A . . LowGQX END=120406092 GT ./. chr2 120409548 . A . . LowGQX END=120409648 GT ./. chr2 120413936 . A . . LowGQX END=120414049 GT ./. chr2 120438428 . T . . LowGQX END=120439368 GT ./. chr2 120443212 . T . . LowGQX END=120443312 GT ./. chr2 120567428 . T . . LowGQX END=120567570 GT ./. chr2 120620110 . A . . LowGQX END=120620222 GT ./. chr2 120634871 . A . . LowGQX END=120634971 GT ./. chr2 120635019 . A . . LowGQX END=120635121 GT ./. chr2 120639335 . T . . LowGQX END=120639435 GT ./. chr2 120639650 . G . . LowGQX END=120639750 GT ./. chr2 120640027 . A . . LowGQX END=120640202 GT ./. chr2 120643365 . T . . LowGQX END=120643465 GT ./. chr2 120658289 . T . . LowGQX END=120658442 GT ./. chr2 120672703 . A . . LowGQX END=120672861 GT ./. chr2 120677643 . A . . LowGQX END=120677820 GT ./. chr2 120684159 . A . . LowGQX END=120684259 GT ./. chr2 120689998 . A . . LowGQX END=120690128 GT ./. chr2 120692344 . T . . LowGQX END=120692537 GT ./. chr2 120702605 . C . . LowGQX END=120702819 GT ./. chr2 120703909 . T . . LowGQX END=120704009 GT ./. chr2 120704092 . A . . LowGQX END=120704208 GT ./. chr2 120709547 . A . . LowGQX END=120709708 GT ./. chr2 120712731 . A . . LowGQX END=120712902 GT ./. chr2 120714358 . T . . LowGQX END=120714516 GT ./. chr2 120714520 . T . . LowGQX END=120714673 GT ./. chr2 120718381 . A . . LowGQX END=120718532 GT ./. chr2 120720190 . A . . LowGQX END=120720323 GT ./. chr2 120723071 . A . . LowGQX END=120723224 GT ./. chr2 120725411 . A . . LowGQX END=120725551 GT ./. chr2 120734483 . T . . LowGQX END=120734649 GT ./. chr2 120776659 . A . . LowGQX END=120776843 GT ./. chr2 120799580 . A . . LowGQX END=120799689 GT ./. chr2 120830672 . A . . LowGQX END=120830826 GT ./. chr2 120831666 . T . . LowGQX END=120831766 GT ./. chr2 120832960 . A . . LowGQX END=120833125 GT ./. chr2 120833254 . A . . LowGQX END=120833354 GT ./. chr2 120834545 . A . . LowGQX END=120834670 GT ./. chr2 120834799 . T . . LowGQX END=120834899 GT ./. chr2 120836064 . A . . LowGQX END=120836164 GT ./. chr2 120844732 . C . . LowGQX END=120844832 GT ./. chr2 120847921 . A . . LowGQX END=120848095 GT ./. chr2 120849129 . A . . LowGQX END=120849240 GT ./. chr2 120850789 . G . . LowGQX END=120850889 GT ./. chr2 120857792 . T . . LowGQX END=120857892 GT ./. chr2 120858273 . A . . LowGQX END=120858393 GT ./. chr2 120861635 . G . . LowGQX END=120861817 GT ./. chr2 120885262 . A . . LowGQX END=120885430 GT ./. chr2 120889192 . A . . LowGQX END=120889294 GT ./. chr2 120900546 . G . . LowGQX END=120900710 GT ./. chr2 120903784 . A . . LowGQX END=120903884 GT ./. chr2 120918454 . T . . LowGQX END=120918554 GT ./. chr2 120922400 . T . . LowGQX END=120922500 GT ./. chr2 120925013 . G . . LowGQX END=120925113 GT ./. chr2 120925451 . A . . LowGQX END=120925586 GT ./. chr2 120932401 . T . . LowGQX END=120932501 GT ./. chr2 120979499 . T . . LowGQX END=120980553 GT ./. chr2 120997642 . T . . LowGQX END=120997742 GT ./. chr2 121036193 . G . . LowGQX END=121036357 GT ./. chr2 121038397 . T . . LowGQX END=121038497 GT ./. chr2 121043448 . A . . LowGQX END=121043661 GT ./. chr2 121047114 . T . . LowGQX END=121047336 GT ./. chr2 121050715 . A . . LowGQX END=121050839 GT ./. chr2 121103763 . C . . LowGQX END=121104215 GT ./. chr2 121106673 . A . . LowGQX END=121107453 GT ./. chr2 121223153 . C . . LowGQX END=121223765 GT ./. chr2 121554846 . T . . LowGQX END=121555096 GT ./. chr2 121684886 . T . . LowGQX END=121685094 GT ./. chr2 121708768 . G . . LowGQX END=121709076 GT ./. chr2 121712770 . C . . LowGQX END=121713058 GT ./. chr2 121726239 . C . . LowGQX END=121726543 GT ./. chr2 121727918 . A . . LowGQX END=121728234 GT ./. chr2 121729466 . T . . LowGQX END=121729691 GT ./. chr2 121730192 . G . . LowGQX END=121730292 GT ./. chr2 121732449 . C . . LowGQX END=121732737 GT ./. chr2 121735959 . C . . LowGQX END=121736211 GT ./. chr2 121740241 . C . . LowGQX END=121740508 GT ./. chr2 121741996 . G . . LowGQX END=121742371 GT ./. chr2 121743803 . G . . LowGQX END=121744242 GT ./. chr2 121745733 . C . . LowGQX END=121748303 GT ./. chr2 121981891 . G . . LowGQX END=121981991 GT ./. chr2 121983114 . C . . LowGQX END=121983214 GT ./. chr2 121989360 . C . . LowGQX END=121989547 GT ./. chr2 121991665 . A . . LowGQX END=121991773 GT ./. chr2 121992793 . C . . LowGQX END=121992893 GT ./. chr2 121995196 . C . . LowGQX END=121995296 GT ./. chr2 121995353 . C . . LowGQX END=121995453 GT ./. chr2 121997070 . C . . LowGQX END=121997230 GT ./. chr2 121999933 . A . . LowGQX END=122000048 GT ./. chr2 122004392 . A . . LowGQX END=122004549 GT ./. chr2 122005738 . A . . LowGQX END=122005849 GT ./. chr2 122006556 . A . . LowGQX END=122006666 GT ./. chr2 122007136 . G . . LowGQX END=122007236 GT ./. chr2 122038673 . G . . LowGQX END=122038850 GT ./. chr2 122042545 . C . . LowGQX END=122042705 GT ./. chr2 122098430 . A . . LowGQX END=122098530 GT ./. chr2 122104613 . C . . LowGQX END=122104731 GT ./. chr2 122106087 . C . . LowGQX END=122106295 GT ./. chr2 122120747 . C . . LowGQX END=122120877 GT ./. chr2 122122628 . T . . LowGQX END=122122861 GT ./. chr2 122125163 . C . . LowGQX END=122125408 GT ./. chr2 122135074 . C . . LowGQX END=122135226 GT ./. chr2 122139722 . A . . LowGQX END=122139901 GT ./. chr2 122144636 . T . . LowGQX END=122144805 GT ./. chr2 122145338 . C . . LowGQX END=122145483 GT ./. chr2 122154675 . A . . LowGQX END=122154860 GT ./. chr2 122155887 . T . . LowGQX END=122155987 GT ./. chr2 122159084 . C . . LowGQX END=122159249 GT ./. chr2 122159395 . G . . LowGQX END=122159495 GT ./. chr2 122160154 . G . . LowGQX END=122160254 GT ./. chr2 122160978 . A . . LowGQX END=122161078 GT ./. chr2 122161305 . G . . LowGQX END=122161405 GT ./. chr2 122161927 . A . . LowGQX END=122162027 GT ./. chr2 122165046 . C . . LowGQX END=122165292 GT ./. chr2 122165373 . T . . LowGQX END=122165473 GT ./. chr2 122166509 . A . . LowGQX END=122166662 GT ./. chr2 122168429 . C . . LowGQX END=122168589 GT ./. chr2 122176197 . C . . LowGQX END=122176306 GT ./. chr2 122182714 . C . . LowGQX END=122182924 GT ./. chr2 122184963 . G . . LowGQX END=122185063 GT ./. chr2 122187648 . C . . LowGQX END=122187754 GT ./. chr2 122202477 . A . . LowGQX END=122202577 GT ./. chr2 122202999 . G . . LowGQX END=122203099 GT ./. chr2 122204912 . C . . LowGQX END=122205084 GT ./. chr2 122205827 . C . . LowGQX END=122205927 GT ./. chr2 122206528 . C . . LowGQX END=122206697 GT ./. chr2 122208478 . T . . LowGQX END=122208578 GT ./. chr2 122209346 . G . . LowGQX END=122209446 GT ./. chr2 122215248 . T . . LowGQX END=122215348 GT ./. chr2 122216415 . C . . LowGQX END=122216552 GT ./. chr2 122217555 . C . . LowGQX END=122217702 GT ./. chr2 122218616 . A . . LowGQX END=122218773 GT ./. chr2 122220095 . T . . LowGQX END=122220195 GT ./. chr2 122227383 . C . . LowGQX END=122227573 GT ./. chr2 122227789 . A . . LowGQX END=122227941 GT ./. chr2 122228184 . C . . LowGQX END=122228284 GT ./. chr2 122247807 . A . . LowGQX END=122247907 GT ./. chr2 122260672 . T . . LowGQX END=122260827 GT ./. chr2 122273240 . C . . LowGQX END=122273340 GT ./. chr2 122283409 . C . . LowGQX END=122283509 GT ./. chr2 122285371 . T . . LowGQX END=122285471 GT ./. chr2 122286252 . C . . LowGQX END=122286357 GT ./. chr2 122287752 . G . . LowGQX END=122287912 GT ./. chr2 122288455 . T . . LowGQX END=122288586 GT ./. chr2 122363276 . C . . LowGQX END=122363472 GT ./. chr2 122484972 . T . . LowGQX END=122485072 GT ./. chr2 122485288 . A . . LowGQX END=122485491 GT ./. chr2 122485849 . T . . LowGQX END=122485949 GT ./. chr2 122486033 . A . . LowGQX END=122486133 GT ./. chr2 122488400 . T . . LowGQX END=122488683 GT ./. chr2 122489670 . A . . LowGQX END=122489783 GT ./. chr2 122493156 . A . . LowGQX END=122493329 GT ./. chr2 122494320 . A . . LowGQX END=122494429 GT ./. chr2 122494618 . G . . LowGQX END=122494771 GT ./. chr2 122513339 . G . . LowGQX END=122513439 GT ./. chr2 122514132 . T . . LowGQX END=122514292 GT ./. chr2 122514813 . T . . LowGQX END=122514913 GT ./. chr2 122514952 . G . . LowGQX END=122515052 GT ./. chr2 122516284 . A . . LowGQX END=122516385 GT ./. chr2 122518983 . A . . LowGQX END=122519103 GT ./. chr2 122520571 . T . . LowGQX END=122520671 GT ./. chr2 122522708 . A . . LowGQX END=122522946 GT ./. chr2 124771559 . T . . LowGQX END=124771910 GT ./. chr2 124783219 . T . . LowGQX END=124783319 GT ./. chr2 124979281 . G . . LowGQX END=124979387 GT ./. chr2 124999776 . G . . LowGQX END=124999971 GT ./. chr2 125175019 . G . . LowGQX END=125175168 GT ./. chr2 125192060 . G . . LowGQX END=125192265 GT ./. chr2 125204329 . G . . LowGQX END=125204515 GT ./. chr2 125232315 . G . . LowGQX END=125232495 GT ./. chr2 125261868 . G . . LowGQX END=125262134 GT ./. chr2 125281879 . G . . LowGQX END=125282030 GT ./. chr2 125284861 . G . . LowGQX END=125285034 GT ./. chr2 125320793 . G . . LowGQX END=125320901 GT ./. chr2 125367377 . G . . LowGQX END=125367498 GT ./. chr2 125405334 . G . . LowGQX END=125405536 GT ./. chr2 125504805 . G . . LowGQX END=125505005 GT ./. chr2 125521248 . G . . LowGQX END=125521377 GT ./. chr2 125521553 . G . . LowGQX END=125521725 GT ./. chr2 125530375 . G . . LowGQX END=125530595 GT ./. chr2 125547478 . G . . LowGQX END=125547719 GT ./. chr2 125555672 . G . . LowGQX END=125555898 GT ./. chr2 125622882 . G . . LowGQX END=125623014 GT ./. chr2 125627246 . C . . LowGQX END=125627346 GT ./. chr2 125660458 . G . . LowGQX END=125660678 GT ./. chr2 125669030 . T . . LowGQX END=125669130 GT ./. chr2 125671668 . G . . LowGQX END=125671866 GT ./. chr2 127413789 . T . . LowGQX END=127413940 GT ./. chr2 127447780 . G . . LowGQX END=127447939 GT ./. chr2 127451389 . G . . LowGQX END=127451575 GT ./. chr2 127453471 . G . . LowGQX END=127453770 GT ./. chr2 127656494 . G . . LowGQX END=127656694 GT ./. chr2 127656780 . A . . LowGQX END=127656880 GT ./. chr2 127657094 . C . . LowGQX END=127657194 GT ./. chr2 127657353 . T . . LowGQX END=127657453 GT ./. chr2 127657504 . T . . LowGQX END=127657604 GT ./. chr2 127658772 . C . . LowGQX END=127658872 GT ./. chr2 127658910 . C . . LowGQX END=127659010 GT ./. chr2 127659445 . C . . LowGQX END=127659591 GT ./. chr2 127806051 . T . . LowGQX END=127806261 GT ./. chr2 127807946 . C . . LowGQX END=127808150 GT ./. chr2 127808327 . C . . LowGQX END=127808540 GT ./. chr2 127808679 . G . . LowGQX END=127808871 GT ./. chr2 127809720 . A . . LowGQX END=127809723;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 127809724 . C . . LowGQX . GT ./. chr2 127809725 . C . . LowGQX END=127809728;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 127809729 . G . . LowGQX . GT ./. chr2 127809730 . T . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 127809731 . G . . LowGQX . GT ./. chr2 127809732 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 127809733 . C . . LowGQX . GT ./. chr2 127809734 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 127809735 . T . . LowGQX . GT ./. chr2 127809736 . G . . LowGQX END=127809737;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 127809738 . T . . LowGQX END=127809743 GT ./. chr2 127809744 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 127809745 . T . . LowGQX END=127809746 GT ./. chr2 127809747 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 127809748 . A . . LowGQX END=127809749 GT ./. chr2 127809750 . C . . LowGQX END=127809752;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 127809753 . C . . LowGQX END=127809755 GT ./. chr2 127809756 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 127809757 . T . . LowGQX . GT ./. chr2 127809758 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 127809759 . G . . LowGQX . GT ./. chr2 127809760 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 127809761 . G . . LowGQX END=127809762 GT ./. chr2 127809763 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 127809764 . T . . LowGQX . GT ./. chr2 127809765 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 127809766 . T . . LowGQX . GT ./. chr2 127809767 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 127809768 . C . . LowGQX . GT ./. chr2 127809769 . T . . LowGQX END=127809775;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 127809776 . C . . LowGQX . GT ./. chr2 127809777 . T . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 127809778 . G . . LowGQX END=127809780 GT ./. chr2 127809781 . C . . LowGQX END=127809796;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:3:60 chr2 127809797 . A . 33.01 LowGQX DP=3;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:2:3:3.01:60:3 chr2 127809798 . C . . LowGQX . GT:DP:GQX:MQ 0/0:3:3:60 chr2 127809799 . A . 36.01 LowGQX DP=3;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:2:3:6.02:60:6 chr2 127809800 . A . 33.01 LowGQX DP=3;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:2:3:3.01:60:3 chr2 127809801 . G . . LowGQX END=127809839;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:3:60 chr2 127809840 . C . 33 LowGQX DP=3;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:2:3:3.01:60:3 chr2 127809841 . C . . LowGQX . GT ./. chr2 127809842 . C . . LowGQX END=127809846;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:3:60 chr2 127809847 . T . . LowGQX . GT ./. chr2 127809848 . C . . LowGQX END=127809851;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 127809852 . C . 33 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr2 127809853 . G . . LowGQX END=127809854 GT ./. chr2 127809855 . C . . LowGQX END=127809856;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 127809857 . G . . LowGQX END=127809859 GT ./. chr2 127809860 . T . . LowGQX END=127809863;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 127809864 . C . . LowGQX END=127809865 GT ./. chr2 127809866 . A . . LowGQX END=127809870;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 127809871 . A . . LowGQX END=127809990 GT ./. chr2 127810947 . C . . LowGQX END=127811080 GT ./. chr2 127811425 . C . . LowGQX END=127811640 GT ./. chr2 127814998 . C . . LowGQX END=127815229 GT ./. chr2 127816476 . T . . LowGQX END=127816836 GT ./. chr2 127818121 . C . . LowGQX END=127818268 GT ./. chr2 127819640 . T . . LowGQX END=127819825 GT ./. chr2 127821096 . A . . LowGQX END=127821274 GT ./. chr2 127821458 . A . . LowGQX END=127821646 GT ./. chr2 127825688 . G . . LowGQX END=127825883 GT ./. chr2 127826449 . C . . LowGQX END=127826659 GT ./. chr2 127827520 . T . . LowGQX END=127827718 GT ./. chr2 127828078 . T . . LowGQX END=127828275 GT ./. chr2 127828287 . T . . LowGQX END=127828444 GT ./. chr2 127834151 . G . . LowGQX END=127834334 GT ./. chr2 127839364 . A . . LowGQX END=127839464 GT ./. chr2 127864385 . G . . LowGQX END=127864571 GT ./. chr2 127944845 . G . . LowGQX END=127944966 GT ./. chr2 127950668 . A . . LowGQX END=127950876 GT ./. chr2 127951355 . C . . LowGQX END=127951455 GT ./. chr2 127952909 . A . . LowGQX END=127953080 GT ./. chr2 127956950 . A . . LowGQX END=127957118 GT ./. chr2 127958696 . A . . LowGQX END=127958910 GT ./. chr2 127960946 . A . . LowGQX END=127961146 GT ./. chr2 128015121 . T . . LowGQX END=128015355 GT ./. chr2 128016821 . G . . LowGQX END=128017076 GT ./. chr2 128018753 . T . . LowGQX END=128018974 GT ./. chr2 128028861 . G . . LowGQX END=128029081 GT ./. chr2 128030390 . A . . LowGQX END=128030589 GT ./. chr2 128036698 . A . . LowGQX END=128037003 GT ./. chr2 128037972 . G . . LowGQX END=128038223 GT ./. chr2 128038224 . A . . LowGQX END=128038269;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 128044228 . A . . LowGQX END=128044645 GT ./. chr2 128046185 . C . . LowGQX END=128046492 GT ./. chr2 128046862 . C . . LowGQX END=128047137 GT ./. chr2 128047214 . G . . LowGQX END=128047452 GT ./. chr2 128047749 . T . . LowGQX END=128047901 GT ./. chr2 128050135 . A . . LowGQX END=128050474 GT ./. chr2 128051038 . G . . LowGQX END=128051346 GT ./. chr2 128051445 . G . . LowGQX END=128051709 GT ./. chr2 128065154 . G . . LowGQX END=128065381 GT ./. chr2 128066160 . C . . LowGQX END=128066339 GT ./. chr2 128072329 . C . . LowGQX END=128072499 GT ./. chr2 128075204 . C . . LowGQX END=128075337 GT ./. chr2 128075744 . C . . LowGQX END=128075894 GT ./. chr2 128079621 . C . . LowGQX END=128079829 GT ./. chr2 128081474 . T . . LowGQX END=128081574 GT ./. chr2 128081734 . A . . LowGQX END=128081834 GT ./. chr2 128083294 . T . . LowGQX END=128083394 GT ./. chr2 128084262 . C . . LowGQX END=128084394 GT ./. chr2 128087436 . T . . LowGQX END=128087591 GT ./. chr2 128087967 . C . . LowGQX END=128088082 GT ./. chr2 128093445 . C . . LowGQX END=128093546 GT ./. chr2 128095233 . T . . LowGQX END=128095384 GT ./. chr2 128096507 . C . . LowGQX END=128096627 GT ./. chr2 128100654 . A . . LowGQX END=128100754 GT ./. chr2 128175996 . A . . LowGQX END=128176096 GT ./. chr2 128177460 . G . . LowGQX END=128177640 GT ./. chr2 128178808 . C . . LowGQX END=128179077 GT ./. chr2 128180442 . C . . LowGQX END=128181036 GT ./. chr2 128183610 . A . . LowGQX END=128183855 GT ./. chr2 128184630 . G . . LowGQX END=128184850 GT ./. chr2 128185882 . C . . LowGQX END=128186574 GT ./. chr2 128227896 . A . . LowGQX END=128227996 GT ./. chr2 128238618 . G . . LowGQX END=128238754 GT ./. chr2 128244127 . A . . LowGQX END=128244243 GT ./. chr2 128246734 . A . . LowGQX END=128246834 GT ./. chr2 128247406 . A . . LowGQX END=128247522 GT ./. chr2 128249545 . A . . LowGQX END=128249667 GT ./. chr2 128250855 . A . . LowGQX END=128250989 GT ./. chr2 128252440 . A . . LowGQX END=128252540 GT ./. chr2 128253572 . A . . LowGQX END=128253727 GT ./. chr2 128255714 . A . . LowGQX END=128255816 GT ./. chr2 128260370 . A . . LowGQX END=128260470 GT ./. chr2 128260961 . A . . LowGQX END=128261155 GT ./. chr2 128262258 . A . . LowGQX END=128263331 GT ./. chr2 128281250 . A . . LowGQX END=128281370 GT ./. chr2 128283658 . G . . LowGQX END=128283818 GT ./. chr2 128283876 . T . . LowGQX END=128284036 GT ./. chr2 128284187 . T . . LowGQX END=128284287 GT ./. chr2 128317257 . C . . LowGQX END=128317357 GT ./. chr2 128321727 . G . . LowGQX END=128321842 GT ./. chr2 128322807 . G . . LowGQX END=128322961 GT ./. chr2 128324217 . G . . LowGQX END=128324403 GT ./. chr2 128327363 . G . . LowGQX END=128327486 GT ./. chr2 128331494 . G . . LowGQX END=128331638 GT ./. chr2 128334169 . G . . LowGQX END=128334284 GT ./. chr2 128335707 . G . . LowGQX END=128335862 GT ./. chr2 128338309 . T . . LowGQX END=128338409 GT ./. chr2 128339465 . G . . LowGQX END=128339586 GT ./. chr2 128339878 . G . . LowGQX END=128340022 GT ./. chr2 128341696 . G . . LowGQX END=128341908 GT ./. chr2 128342352 . G . . LowGQX END=128342489 GT ./. chr2 128345966 . G . . LowGQX END=128346131 GT ./. chr2 128347666 . G . . LowGQX END=128347805 GT ./. chr2 128350368 . G . . LowGQX END=128350522 GT ./. chr2 128351120 . G . . LowGQX END=128351220 GT ./. chr2 128354034 . C . . LowGQX END=128354134 GT ./. chr2 128363411 . C . . LowGQX END=128363511 GT ./. chr2 128364780 . G . . LowGQX END=128365000 GT ./. chr2 128366282 . G . . LowGQX END=128366454 GT ./. chr2 128367080 . G . . LowGQX END=128367291 GT ./. chr2 128367423 . G . . LowGQX END=128367592 GT ./. chr2 128369814 . T . . LowGQX END=128369914 GT ./. chr2 128370050 . G . . LowGQX END=128370179 GT ./. chr2 128377914 . G . . LowGQX END=128378042 GT ./. chr2 128379506 . C . . LowGQX END=128379677 GT ./. chr2 128380765 . A . . LowGQX END=128380951 GT ./. chr2 128381667 . G . . LowGQX END=128381896 GT ./. chr2 128382942 . G . . LowGQX END=128383111 GT ./. chr2 128384549 . G . . LowGQX END=128384668 GT ./. chr2 128384730 . G . . LowGQX END=128384920 GT ./. chr2 128385040 . T . . LowGQX END=128385271 GT ./. chr2 128385300 . G . . LowGQX END=128385400 GT ./. chr2 128385412 . C . . LowGQX END=128385512 GT ./. chr2 128385535 . T . . LowGQX END=128385758 GT ./. chr2 128385768 . C . . LowGQX END=128385868 GT ./. chr2 128385904 . G . . LowGQX END=128386111 GT ./. chr2 128387199 . A . . LowGQX END=128387402 GT ./. chr2 128388352 . G . . LowGQX END=128388484 GT ./. chr2 128388780 . G . . LowGQX END=128388939 GT ./. chr2 128389168 . G . . LowGQX END=128389329 GT ./. chr2 128389790 . C . . LowGQX END=128389977 GT ./. chr2 128390832 . G . . LowGQX END=128390939 GT ./. chr2 128391690 . A . . LowGQX END=128391909 GT ./. chr2 128392165 . C . . LowGQX END=128392265 GT ./. chr2 128392694 . G . . LowGQX END=128392802 GT ./. chr2 128393296 . G . . LowGQX END=128393483 GT ./. chr2 128393782 . G . . LowGQX END=128393900 GT ./. chr2 128394059 . C . . LowGQX END=128394212 GT ./. chr2 128394368 . G . . LowGQX END=128394993 GT ./. chr2 128396854 . C . . LowGQX END=128397006 GT ./. chr2 128397633 . A . . LowGQX END=128397733 GT ./. chr2 128397820 . T . . LowGQX END=128397920 GT ./. chr2 128398468 . C . . LowGQX END=128398568 GT ./. chr2 128399564 . C . . LowGQX END=128399777 GT ./. chr2 128400496 . A . . LowGQX END=128400650 GT ./. chr2 128401039 . G . . LowGQX END=128401167 GT ./. chr2 128401608 . G . . LowGQX END=128401708 GT ./. chr2 128407569 . G . . LowGQX END=128407669 GT ./. chr2 128408288 . A . . LowGQX END=128409332 GT ./. chr2 128411996 . A . . LowGQX END=128412121 GT ./. chr2 128412358 . G . . LowGQX END=128412555 GT ./. chr2 128414945 . G . . LowGQX END=128415139 GT ./. chr2 128421817 . T . . LowGQX END=128421972 GT ./. chr2 128431235 . A . . LowGQX END=128431335 GT ./. chr2 128432483 . G . . LowGQX END=128432643 GT ./. chr2 128459090 . C . . LowGQX END=128459753 GT ./. chr2 128463895 . T . . LowGQX END=128464129 GT ./. chr2 128466249 . A . . LowGQX END=128466469 GT ./. chr2 128467061 . T . . LowGQX END=128467161 GT ./. chr2 128467265 . A . . LowGQX END=128467433 GT ./. chr2 128471154 . C . . LowGQX END=128471598 GT ./. chr2 128474656 . C . . LowGQX END=128474887 GT ./. chr2 128476837 . A . . LowGQX END=128477930 GT ./. chr2 128479408 . A . . LowGQX END=128479598 GT ./. chr2 128480163 . A . . LowGQX END=128480307 GT ./. chr2 128480526 . T . . LowGQX END=128480626 GT ./. chr2 128480825 . A . . LowGQX END=128480829 GT ./. chr2 128480830 . A . . LowGQX END=128480907;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 128480908 . G . . LowGQX . GT ./. chr2 128480909 . A . . LowGQX END=128480925;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 128481905 . A . . LowGQX END=128482020 GT ./. chr2 128482451 . T . . LowGQX END=128482551 GT ./. chr2 128482633 . A . . LowGQX END=128482792 GT ./. chr2 128484223 . A . . LowGQX END=128484354 GT ./. chr2 128495554 . C . . LowGQX END=128495654 GT ./. chr2 128520634 . A . . LowGQX END=128520736 GT ./. chr2 128522046 . A . . LowGQX END=128522556 GT ./. chr2 128522746 . A . . LowGQX END=128522846 GT ./. chr2 128525761 . A . . LowGQX END=128525870 GT ./. chr2 128526432 . A . . LowGQX END=128526592 GT ./. chr2 128528350 . A . . LowGQX END=128528558 GT ./. chr2 128605611 . C . . LowGQX END=128605771 GT ./. chr2 128608162 . A . . LowGQX END=128608262 GT ./. chr2 128610497 . A . . LowGQX END=128610682 GT ./. chr2 128615529 . A . . LowGQX END=128615689 GT ./. chr2 128622666 . T . . LowGQX END=128622782 GT ./. chr2 128624472 . A . . LowGQX END=128624573 GT ./. chr2 128627024 . T . . LowGQX END=128627124 GT ./. chr2 128628386 . A . . LowGQX END=128628505 GT ./. chr2 128628821 . A . . LowGQX END=128628936 GT ./. chr2 128631390 . T . . LowGQX END=128631820 GT ./. chr2 128699548 . A . . LowGQX END=128699741 GT ./. chr2 128699996 . A . . LowGQX END=128700114 GT ./. chr2 128703028 . A . . LowGQX END=128703136 GT ./. chr2 128707441 . A . . LowGQX END=128707571 GT ./. chr2 128707732 . A . . LowGQX END=128707985 GT ./. chr2 128712558 . A . . LowGQX END=128712921 GT ./. chr2 128735558 . C . . LowGQX END=128735664 GT ./. chr2 128744357 . A . . LowGQX END=128744539 GT ./. chr2 128747136 . A . . LowGQX END=128747443 GT ./. chr2 128750709 . T . . LowGQX END=128750885 GT ./. chr2 128753922 . A . . LowGQX END=128754068 GT ./. chr2 128757313 . A . . LowGQX END=128757422 GT ./. chr2 128757626 . T . . LowGQX END=128757726 GT ./. chr2 128757879 . A . . LowGQX END=128758031 GT ./. chr2 128767841 . A . . LowGQX END=128767970 GT ./. chr2 128770602 . G . . LowGQX END=128770731 GT ./. chr2 128772375 . A . . LowGQX END=128772491 GT ./. chr2 128773961 . A . . LowGQX END=128774124 GT ./. chr2 128775252 . A . . LowGQX END=128775492 GT ./. chr2 128783753 . A . . LowGQX END=128783875 GT ./. chr2 128784593 . C . . LowGQX END=128784752 GT ./. chr2 128848899 . C . . LowGQX END=128849070 GT ./. chr2 128855001 . A . . LowGQX END=128855141 GT ./. chr2 128860610 . T . . LowGQX END=128860710 GT ./. chr2 128861444 . A . . LowGQX END=128861598 GT ./. chr2 128865510 . A . . LowGQX END=128865645 GT ./. chr2 128867206 . A . . LowGQX END=128867323 GT ./. chr2 128870656 . A . . LowGQX END=128870835 GT ./. chr2 128872696 . A . . LowGQX END=128872797 GT ./. chr2 128873829 . T . . LowGQX END=128873929 GT ./. chr2 128877878 . G . . LowGQX END=128878033 GT ./. chr2 128878713 . T . . LowGQX END=128878875 GT ./. chr2 128880741 . A . . LowGQX END=128880841 GT ./. chr2 128884931 . T . . LowGQX END=128885031 GT ./. chr2 128886601 . A . . LowGQX END=128886756 GT ./. chr2 128890713 . A . . LowGQX END=128890837 GT ./. chr2 128892443 . T . . LowGQX END=128892543 GT ./. chr2 128896289 . A . . LowGQX END=128896429 GT ./. chr2 128900666 . A . . LowGQX END=128900802 GT ./. chr2 128903375 . A . . LowGQX END=128903585 GT ./. chr2 128910356 . A . . LowGQX END=128910526 GT ./. chr2 128913061 . A . . LowGQX END=128913164 GT ./. chr2 128913874 . T . . LowGQX END=128914028 GT ./. chr2 128914824 . A . . LowGQX END=128914924 GT ./. chr2 128917086 . A . . LowGQX END=128917297 GT ./. chr2 128918032 . A . . LowGQX END=128918212 GT ./. chr2 128918710 . A . . LowGQX END=128918845 GT ./. chr2 128922251 . T . . LowGQX END=128922402 GT ./. chr2 128927860 . A . . LowGQX END=128927967 GT ./. chr2 128928770 . T . . LowGQX END=128928870 GT ./. chr2 128930145 . A . . LowGQX END=128930339 GT ./. chr2 128931353 . A . . LowGQX END=128931516 GT ./. chr2 128932340 . G . . LowGQX END=128932440 GT ./. chr2 128934381 . C . . LowGQX END=128934481 GT ./. chr2 128935401 . T . . LowGQX END=128935501 GT ./. chr2 128936040 . A . . LowGQX END=128936146 GT ./. chr2 128937353 . T . . LowGQX END=128937453 GT ./. chr2 128938462 . A . . LowGQX END=128938649 GT ./. chr2 128939702 . A . . LowGQX END=128939867 GT ./. chr2 128941247 . A . . LowGQX END=128941366 GT ./. chr2 128944255 . A . . LowGQX END=128944376 GT ./. chr2 128945021 . A . . LowGQX END=128945191 GT ./. chr2 128947254 . C . . LowGQX END=128947354 GT ./. chr2 129025685 . T . . LowGQX END=129026496 GT ./. chr2 129075560 . C . . LowGQX END=129076189 GT ./. chr2 130737688 . C . . LowGQX END=130738454 GT ./. chr2 130831805 . G . . LowGQX END=130832418 GT ./. chr2 130832419 . G . . LowGQX END=130832624;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 130832625 . T . 8.05 LowGQX DP=1;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:0:1:0.02:60:0 chr2 130832626 . C . . LowGQX END=130832630;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 130832631 . A . . LowGQX END=130833146 GT ./. chr2 130834612 . T . . LowGQX END=130834775 GT ./. chr2 130843375 . C . . LowGQX END=130843569 GT ./. chr2 130843828 . A . . LowGQX END=130843988 GT ./. chr2 130845565 . T . . LowGQX END=130845725 GT ./. chr2 130850936 . T . . LowGQX END=130851096 GT ./. chr2 130856971 . G . . LowGQX END=130857210 GT ./. chr2 130858168 . A . . LowGQX END=130858321 GT ./. chr2 130859608 . A . . LowGQX END=130859768 GT ./. chr2 130865507 . T . . LowGQX END=130865721 GT ./. chr2 130868084 . G . . LowGQX END=130868295 GT ./. chr2 130869516 . T . . LowGQX END=130869727 GT ./. chr2 130872453 . C . . LowGQX END=130872642 GT ./. chr2 130872725 . A . . LowGQX END=130872902 GT ./. chr2 130877567 . C . . LowGQX END=130878089 GT ./. chr2 130897126 . G . . LowGQX END=130897266 GT ./. chr2 130897443 . C . . LowGQX END=130897543 GT ./. chr2 130897583 . A . . LowGQX END=130897683 GT ./. chr2 130897739 . C . . LowGQX END=130897947 GT ./. chr2 130898705 . G . . LowGQX END=130898882 GT ./. chr2 130899704 . A . . LowGQX END=130900889 GT ./. chr2 130901924 . G . . LowGQX END=130902084 GT ./. chr2 130902193 . C . . LowGQX END=130902575 GT ./. chr2 130910126 . C . . LowGQX END=130910460 GT ./. chr2 130910614 . A . . LowGQX END=130910794 GT ./. chr2 130910890 . A . . LowGQX END=130911026 GT ./. chr2 130911273 . A . . LowGQX END=130911511 GT ./. chr2 130911848 . A . . LowGQX END=130912222 GT ./. chr2 130912667 . A . . LowGQX END=130912835 GT ./. chr2 130913606 . A . . LowGQX END=130913711 GT ./. chr2 130914156 . A . . LowGQX END=130914387 GT ./. chr2 130914791 . C . . LowGQX END=130914972 GT ./. chr2 130915748 . T . . LowGQX END=130915848 GT ./. chr2 130918753 . C . . LowGQX END=130918906 GT ./. chr2 130921933 . A . . LowGQX END=130922033 GT ./. chr2 130924998 . T . . LowGQX END=130925166 GT ./. chr2 130929920 . A . . LowGQX END=130930076 GT ./. chr2 130930175 . A . . LowGQX END=130930275 GT ./. chr2 130930358 . A . . LowGQX END=130930471 GT ./. chr2 130930780 . A . . LowGQX END=130930940 GT ./. chr2 130931085 . A . . LowGQX END=130931257 GT ./. chr2 130932481 . C . . LowGQX END=130932581 GT ./. chr2 130934119 . A . . LowGQX END=130934219 GT ./. chr2 130939089 . C . . LowGQX END=130939189 GT ./. chr2 130939307 . T . . LowGQX END=130939407 GT ./. chr2 130939843 . G . . LowGQX END=130940028 GT ./. chr2 130940177 . G . . LowGQX END=130940351 GT ./. chr2 130941105 . A . . LowGQX END=130941675 GT ./. chr2 130948010 . A . . LowGQX END=130948262 GT ./. chr2 130949402 . C . . LowGQX END=130949703 GT ./. chr2 130951357 . A . . LowGQX END=130952042 GT ./. chr2 130952650 . A . . LowGQX END=130952803 GT ./. chr2 130953720 . A . . LowGQX END=130953947 GT ./. chr2 130955883 . A . . LowGQX END=130955983 GT ./. chr2 131096691 . T . . LowGQX END=131096808 GT ./. chr2 131097183 . T . . LowGQX END=131097336 GT ./. chr2 131098439 . A . . LowGQX END=131098615 GT ./. chr2 131099232 . G . . LowGQX END=131099332 GT ./. chr2 131099412 . A . . LowGQX END=131099520 GT ./. chr2 131099586 . A . . LowGQX END=131099701 GT ./. chr2 131099705 . A . . LowGQX END=131099805 GT ./. chr2 131100458 . G . . LowGQX END=131100558 GT ./. chr2 131100657 . A . . LowGQX END=131100770 GT ./. chr2 131100832 . A . . LowGQX END=131100932 GT ./. chr2 131102200 . A . . LowGQX END=131102300 GT ./. chr2 131102947 . A . . LowGQX END=131103061 GT ./. chr2 131103138 . A . . LowGQX END=131103275 GT ./. chr2 131103350 . A . . LowGQX END=131103509 GT ./. chr2 131103589 . A . . LowGQX END=131103689 GT ./. chr2 131103761 . T . . LowGQX END=131103861 GT ./. chr2 131103927 . A . . LowGQX END=131104044 GT ./. chr2 131113618 . C . . LowGQX END=131113693;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 131113694 . T . . LowGQX END=131113710 GT ./. chr2 131113711 . T . . LowGQX END=131113778;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 131114089 . G . . LowGQX END=131114249 GT ./. chr2 131116437 . C . . LowGQX END=131116551 GT ./. chr2 131116795 . T . . LowGQX END=131116895 GT ./. chr2 131116968 . A . . LowGQX END=131117068 GT ./. chr2 131117151 . C . . LowGQX END=131117251 GT ./. chr2 131119660 . C . . LowGQX END=131119820 GT ./. chr2 131126691 . C . . LowGQX END=131126791 GT ./. chr2 131127320 . C . . LowGQX END=131127420 GT ./. chr2 131127619 . A . . LowGQX END=131127766 GT ./. chr2 131128114 . C . . LowGQX END=131128214 GT ./. chr2 131128267 . G . . LowGQX END=131128367 GT ./. chr2 131128443 . A . . LowGQX END=131128543 GT ./. chr2 131128767 . T . . LowGQX END=131128867 GT ./. chr2 131129757 . G . . LowGQX END=131130127 GT ./. chr2 131130434 . T . . LowGQX END=131130534 GT ./. chr2 131130714 . A . . LowGQX END=131130814 GT ./. chr2 131132197 . T . . LowGQX END=131132297 GT ./. chr2 131220377 . G . . LowGQX END=131221727 GT ./. chr2 131223183 . T . . LowGQX END=131223346 GT ./. chr2 131231939 . C . . LowGQX END=131232133 GT ./. chr2 131232392 . A . . LowGQX END=131232552 GT ./. chr2 131234129 . T . . LowGQX END=131234289 GT ./. chr2 131239501 . T . . LowGQX END=131239661 GT ./. chr2 131245583 . T . . LowGQX END=131245772 GT ./. chr2 131246720 . A . . LowGQX END=131246880 GT ./. chr2 131248168 . A . . LowGQX END=131248328 GT ./. chr2 131254050 . T . . LowGQX END=131254264 GT ./. chr2 131256625 . G . . LowGQX END=131256795 GT ./. chr2 131258037 . T . . LowGQX END=131258216 GT ./. chr2 131261018 . C . . LowGQX END=131261207 GT ./. chr2 131261352 . C . . LowGQX END=131261511 GT ./. chr2 131266287 . C . . LowGQX END=131266809 GT ./. chr2 131278919 . T . . LowGQX END=131279137 GT ./. chr2 131279275 . T . . LowGQX END=131279755 GT ./. chr2 131280312 . A . . LowGQX END=131280529 GT ./. chr2 131280691 . G . . LowGQX END=131280903 GT ./. chr2 131285218 . C . . LowGQX END=131285520 GT ./. chr2 131295909 . C . . LowGQX END=131296069 GT ./. chr2 131297582 . T . . LowGQX END=131297742 GT ./. chr2 131299937 . G . . LowGQX END=131300097 GT ./. chr2 131301444 . G . . LowGQX END=131301632 GT ./. chr2 131303764 . A . . LowGQX END=131303965 GT ./. chr2 131328382 . A . . LowGQX END=131328554 GT ./. chr2 131331853 . C . . LowGQX END=131332193 GT ./. chr2 131334234 . C . . LowGQX END=131334534 GT ./. chr2 131335723 . T . . LowGQX END=131335883 GT ./. chr2 131338076 . T . . LowGQX END=131338236 GT ./. chr2 131339779 . T . . LowGQX END=131339932 GT ./. chr2 131350399 . T . . LowGQX END=131350701 GT ./. chr2 131355016 . G . . LowGQX END=131355228 GT ./. chr2 131355390 . C . . LowGQX END=131355607 GT ./. chr2 131356164 . T . . LowGQX END=131356584 GT ./. chr2 131356727 . A . . LowGQX END=131356919 GT ./. chr2 131369094 . T . . LowGQX END=131369524 GT ./. chr2 131374311 . T . . LowGQX END=131374478 GT ./. chr2 131374626 . T . . LowGQX END=131374812 GT ./. chr2 131377566 . G . . LowGQX END=131377777 GT ./. chr2 131379007 . C . . LowGQX END=131379177 GT ./. chr2 131381562 . A . . LowGQX END=131381776 GT ./. chr2 131387447 . C . . LowGQX END=131387607 GT ./. chr2 131388894 . A . . LowGQX END=131389054 GT ./. chr2 131390041 . T . . LowGQX END=131390252 GT ./. chr2 131396117 . A . . LowGQX END=131396277 GT ./. chr2 131401481 . T . . LowGQX END=131401641 GT ./. chr2 131403222 . T . . LowGQX END=131403382 GT ./. chr2 131403690 . T . . LowGQX END=131403901 GT ./. chr2 131412452 . G . . LowGQX END=131412615 GT ./. chr2 131414121 . G . . LowGQX END=131415453 GT ./. chr2 131486723 . G . . LowGQX END=131487778 GT ./. chr2 131519635 . G . . LowGQX END=131522234 GT ./. chr2 131595131 . T . . LowGQX END=131595291 GT ./. chr2 131671559 . A . . LowGQX END=131671797 GT ./. chr2 131672509 . C . . LowGQX END=131675072 GT ./. chr2 131688524 . G . . LowGQX END=131688833 GT ./. chr2 131704080 . A . . LowGQX END=131704259 GT ./. chr2 131769267 . A . . LowGQX END=131769482 GT ./. chr2 131785516 . A . . LowGQX END=131785660 GT ./. chr2 131796424 . A . . LowGQX END=131796608 GT ./. chr2 131797567 . A . . LowGQX END=131797768 GT ./. chr2 131797832 . A . . LowGQX END=131798016 GT ./. chr2 131798801 . A . . LowGQX END=131799038 GT ./. chr2 131799386 . A . . LowGQX END=131799520 GT ./. chr2 131801023 . A . . LowGQX END=131801159 GT ./. chr2 131801870 . A . . LowGQX END=131802118 GT ./. chr2 131802940 . A . . LowGQX END=131803114 GT ./. chr2 131803609 . A . . LowGQX END=131803765 GT ./. chr2 131805778 . T . . LowGQX END=131805917 GT ./. chr2 131810423 . C . . LowGQX END=131810634 GT ./. chr2 131812832 . A . . LowGQX END=131813043 GT ./. chr2 131813124 . A . . LowGQX END=131813303 GT ./. chr2 131829420 . G . . LowGQX END=131829520 GT ./. chr2 131840135 . A . . LowGQX END=131840235 GT ./. chr2 131878392 . A . . LowGQX END=131878554 GT ./. chr2 131883324 . A . . LowGQX END=131883481 GT ./. chr2 131884205 . A . . LowGQX END=131884362 GT ./. chr2 131888202 . G . . LowGQX END=131888364 GT ./. chr2 131890473 . A . . LowGQX END=131890589 GT ./. chr2 131897739 . G . . LowGQX END=131897851 GT ./. chr2 131904208 . A . . LowGQX END=131904349 GT ./. chr2 131975975 . G . . LowGQX END=131976497 GT ./. chr2 131981168 . G . . LowGQX END=131981347 GT ./. chr2 131981431 . T . . LowGQX END=131981617 GT ./. chr2 131984395 . G . . LowGQX END=131984503 GT ./. chr2 131985785 . C . . LowGQX END=131985955 GT ./. chr2 131988334 . T . . LowGQX END=131988548 GT ./. chr2 131994230 . C . . LowGQX END=131994390 GT ./. chr2 131995686 . T . . LowGQX END=131995839 GT ./. chr2 131996829 . T . . LowGQX END=131997018 GT ./. chr2 132002905 . A . . LowGQX END=132003065 GT ./. chr2 132008276 . T . . LowGQX END=132008436 GT ./. chr2 132010011 . T . . LowGQX END=132010171 GT ./. chr2 132010479 . T . . LowGQX END=132010673 GT ./. chr2 132019257 . G . . LowGQX END=132019420 GT ./. chr2 132020916 . T . . LowGQX END=132022260 GT ./. chr2 132044681 . C . . LowGQX END=132045039 GT ./. chr2 132110592 . G . . LowGQX END=132111100 GT ./. chr2 132120528 . A . . LowGQX END=132121294 GT ./. chr2 132200214 . T . . LowGQX END=132202002 GT ./. chr2 132227855 . T . . LowGQX END=132227955 GT ./. chr2 132229641 . C . . LowGQX END=132229756 GT ./. chr2 132233725 . C . . LowGQX END=132233825 GT ./. chr2 132235735 . A . . LowGQX END=132235962 GT ./. chr2 132236879 . A . . LowGQX END=132237032 GT ./. chr2 132237640 . A . . LowGQX END=132238325 GT ./. chr2 132240123 . A . . LowGQX END=132240424 GT ./. chr2 132241632 . T . . LowGQX END=132241794 GT ./. chr2 132249426 . G . . LowGQX END=132249600 GT ./. chr2 132249778 . A . . LowGQX END=132249972 GT ./. chr2 132266102 . T . . LowGQX END=132266202 GT ./. chr2 132273144 . C . . LowGQX END=132273321 GT ./. chr2 132273883 . G . . LowGQX END=132273983 GT ./. chr2 132274430 . G . . LowGQX END=132274531 GT ./. chr2 132275300 . G . . LowGQX END=132275415 GT ./. chr2 132276740 . A . . LowGQX END=132276857 GT ./. chr2 132277108 . C . . LowGQX END=132277240 GT ./. chr2 132277670 . T . . LowGQX END=132278000 GT ./. chr2 132285541 . G . . LowGQX END=132285920 GT ./. chr2 132285971 . G . . LowGQX END=132286131 GT ./. chr2 132286985 . A . . LowGQX END=132287288 GT ./. chr2 132287550 . A . . LowGQX END=132288403 GT ./. chr2 132289235 . A . . LowGQX END=132289380 GT ./. chr2 132290149 . A . . LowGQX END=132290357 GT ./. chr2 132290424 . C . . LowGQX END=132290524 GT ./. chr2 132290565 . G . . LowGQX END=132290665 GT ./. chr2 132290840 . A . . LowGQX END=132290974 GT ./. chr2 132509095 . T . . LowGQX END=132509195 GT ./. chr2 132524179 . T . . LowGQX END=132524779 GT ./. chr2 132552723 . C . . LowGQX END=132553323 GT ./. chr2 132558378 . C . . LowGQX END=132558538 GT ./. chr2 132905703 . C . . LowGQX END=132905803 GT ./. chr2 132908414 . T . . LowGQX END=132908567 GT ./. chr2 132911089 . A . . LowGQX END=132911268 GT ./. chr2 132912234 . C . . LowGQX END=132912342 GT ./. chr2 132914545 . C . . LowGQX END=132914720 GT ./. chr2 132914881 . C . . LowGQX END=132914997 GT ./. chr2 132919060 . C . . LowGQX END=132919279 GT ./. chr2 133014539 . G . . LowGQX END=133014654 GT ./. chr2 133174614 . T . . LowGQX END=133175474 GT ./. chr2 133402672 . A . . LowGQX END=133403182 GT ./. chr2 133403616 . C . . LowGQX END=133403856 GT ./. chr2 133425971 . A . . LowGQX END=133426151 GT ./. chr2 133427370 . G . . LowGQX END=133427524 GT ./. chr2 133427601 . C . . LowGQX END=133427701 GT ./. chr2 133430820 . G . . LowGQX END=133430920 GT ./. chr2 133472408 . T . . LowGQX END=133472508 GT ./. chr2 133483199 . C . . LowGQX END=133483379 GT ./. chr2 133486388 . C . . LowGQX END=133486526 GT ./. chr2 133489309 . C . . LowGQX END=133489625 GT ./. chr2 133531378 . T . . LowGQX END=133531478 GT ./. chr2 133538624 . C . . LowGQX END=133538803 GT ./. chr2 133539512 . C . . LowGQX END=133543292 GT ./. chr2 133547595 . C . . LowGQX END=133547779 GT ./. chr2 133554200 . C . . LowGQX END=133554303 GT ./. chr2 133618064 . C . . LowGQX END=133618185 GT ./. chr2 133626478 . T . . LowGQX END=133626578 GT ./. chr2 133636405 . T . . LowGQX END=133636505 GT ./. chr2 133683713 . C . . LowGQX END=133683813 GT ./. chr2 133712169 . T . . LowGQX END=133712269 GT ./. chr2 133712271 . G . . LowGQX END=133712371 GT ./. chr2 133721292 . C . . LowGQX END=133721472 GT ./. chr2 133751719 . G . . LowGQX END=133751819 GT ./. chr2 133881316 . A . . LowGQX END=133881416 GT ./. chr2 133887537 . C . . LowGQX END=133887727 GT ./. chr2 133971270 . A . . LowGQX END=133971370 GT ./. chr2 134060596 . G . . LowGQX END=134060696 GT ./. chr2 134274958 . A . . LowGQX END=134275113 GT ./. chr2 135011973 . C . . LowGQX END=135012218 GT ./. chr2 135027955 . A . . LowGQX END=135028124 GT ./. chr2 135075028 . T . . LowGQX END=135075189 GT ./. chr2 135076216 . T . . LowGQX END=135076316 GT ./. chr2 135093774 . C . . LowGQX END=135093874 GT ./. chr2 135095828 . A . . LowGQX END=135095994 GT ./. chr2 135099159 . A . . LowGQX END=135099369 GT ./. chr2 135102499 . A . . LowGQX END=135102638 GT ./. chr2 135107374 . A . . LowGQX END=135107512 GT ./. chr2 135119844 . A . . LowGQX END=135119982 GT ./. chr2 135160557 . A . . LowGQX END=135160737 GT ./. chr2 135170438 . A . . LowGQX END=135170589 GT ./. chr2 135180372 . A . . LowGQX END=135180493 GT ./. chr2 135185924 . C . . LowGQX END=135186024 GT ./. chr2 135199327 . A . . LowGQX END=135199489 GT ./. chr2 135206218 . A . . LowGQX END=135206421 GT ./. chr2 135214268 . A . . LowGQX END=135214368 GT ./. chr2 135215601 . A . . LowGQX END=135215747 GT ./. chr2 135223683 . A . . LowGQX END=135223799 GT ./. chr2 135260470 . A . . LowGQX END=135260571 GT ./. chr2 135308136 . C . . LowGQX END=135308236 GT ./. chr2 135309591 . T . . LowGQX END=135309691 GT ./. chr2 135470768 . A . . LowGQX END=135470892 GT ./. chr2 135471121 . A . . LowGQX END=135471221 GT ./. chr2 135476231 . G . . LowGQX END=135476571 GT ./. chr2 135596181 . A . . LowGQX END=135596332 GT ./. chr2 135602776 . C . . LowGQX END=135602876 GT ./. chr2 135616829 . A . . LowGQX END=135616930 GT ./. chr2 135619514 . T . . LowGQX END=135619614 GT ./. chr2 135620963 . A . . LowGQX END=135621204 GT ./. chr2 135625087 . T . . LowGQX END=135625246 GT ./. chr2 135628533 . A . . LowGQX END=135628633 GT ./. chr2 135630037 . A . . LowGQX END=135630214 GT ./. chr2 135655909 . A . . LowGQX END=135656069 GT ./. chr2 135659350 . A . . LowGQX END=135659450 GT ./. chr2 135676423 . T . . LowGQX END=135676585 GT ./. chr2 135677371 . A . . LowGQX END=135677471 GT ./. chr2 135694409 . A . . LowGQX END=135694542 GT ./. chr2 135696553 . T . . LowGQX END=135696653 GT ./. chr2 135700164 . A . . LowGQX END=135700264 GT ./. chr2 135703320 . T . . LowGQX END=135703420 GT ./. chr2 135703422 . A . . LowGQX END=135703522 GT ./. chr2 135703644 . G . . LowGQX END=135703744 GT ./. chr2 135705300 . C . . LowGQX END=135705472 GT ./. chr2 135710209 . A . . LowGQX END=135710336 GT ./. chr2 135710798 . A . . LowGQX END=135712221 GT ./. chr2 135722404 . A . . LowGQX END=135722504 GT ./. chr2 135738386 . C . . LowGQX END=135739091 GT ./. chr2 135740749 . C . . LowGQX END=135740902 GT ./. chr2 135741244 . A . . LowGQX END=135741434 GT ./. chr2 135743368 . A . . LowGQX END=135745826 GT ./. chr2 135749065 . T . . LowGQX END=135749165 GT ./. chr2 135756306 . A . . LowGQX END=135756570 GT ./. chr2 135757497 . T . . LowGQX END=135757597 GT ./. chr2 135763003 . A . . LowGQX END=135763163 GT ./. chr2 135779283 . A . . LowGQX END=135779403 GT ./. chr2 135781013 . A . . LowGQX END=135781113 GT ./. chr2 135782157 . T . . LowGQX END=135782257 GT ./. chr2 135809827 . C . . LowGQX END=135810107 GT ./. chr2 135815530 . T . . LowGQX END=135815720 GT ./. chr2 135847324 . C . . LowGQX END=135847484 GT ./. chr2 135848517 . T . . LowGQX END=135848752 GT ./. chr2 135851134 . T . . LowGQX END=135851315 GT ./. chr2 135870670 . T . . LowGQX END=135870892 GT ./. chr2 135872735 . T . . LowGQX END=135873003 GT ./. chr2 135878338 . T . . LowGQX END=135878540 GT ./. chr2 135881684 . G . . LowGQX END=135881868 GT ./. chr2 135883700 . A . . LowGQX END=135883871 GT ./. chr2 135884102 . T . . LowGQX END=135884278 GT ./. chr2 135887514 . A . . LowGQX END=135887709 GT ./. chr2 135888071 . A . . LowGQX END=135888343 GT ./. chr2 135890414 . A . . LowGQX END=135890606 GT ./. chr2 135891380 . G . . LowGQX END=135891655 GT ./. chr2 135892784 . A . . LowGQX END=135892941 GT ./. chr2 135893083 . T . . LowGQX END=135893554 GT ./. chr2 135907888 . T . . LowGQX END=135908128 GT ./. chr2 135911168 . G . . LowGQX END=135911498 GT ./. chr2 135920027 . G . . LowGQX END=135920473 GT ./. chr2 135920505 . T . . LowGQX END=135920723 GT ./. chr2 135922113 . G . . LowGQX END=135922318 GT ./. chr2 135922669 . T . . LowGQX END=135922769 GT ./. chr2 135925213 . T . . LowGQX END=135925313 GT ./. chr2 135926064 . T . . LowGQX END=135926403 GT ./. chr2 135927267 . G . . LowGQX END=135927367 GT ./. chr2 135957682 . T . . LowGQX END=135957782 GT ./. chr2 135957911 . T . . LowGQX END=135958011 GT ./. chr2 135960401 . C . . LowGQX END=135960534 GT ./. chr2 135965003 . C . . LowGQX END=135965407 GT ./. chr2 135966437 . C . . LowGQX END=135966549 GT ./. chr2 135975034 . C . . LowGQX END=135975178 GT ./. chr2 135976646 . C . . LowGQX END=135976806 GT ./. chr2 135981992 . T . . LowGQX END=135982092 GT ./. chr2 135985381 . C . . LowGQX END=135985586 GT ./. chr2 135988082 . C . . LowGQX END=135988498 GT ./. chr2 136023103 . C . . LowGQX END=136023257 GT ./. chr2 136026531 . C . . LowGQX END=136026712 GT ./. chr2 136028875 . A . . LowGQX END=136028975 GT ./. chr2 136029337 . C . . LowGQX END=136029458 GT ./. chr2 136033205 . C . . LowGQX END=136033326 GT ./. chr2 136071058 . C . . LowGQX END=136071176 GT ./. chr2 136072928 . C . . LowGQX END=136073118 GT ./. chr2 136103113 . A . . LowGQX END=136103213 GT ./. chr2 136107553 . C . . LowGQX END=136107786 GT ./. chr2 136111019 . C . . LowGQX END=136111199 GT ./. chr2 136148271 . A . . LowGQX END=136148431 GT ./. chr2 136261733 . C . . LowGQX END=136261833 GT ./. chr2 136261898 . C . . LowGQX END=136262060 GT ./. chr2 136360143 . C . . LowGQX END=136360313 GT ./. chr2 136362334 . A . . LowGQX END=136362589 GT ./. chr2 136373693 . T . . LowGQX END=136373793 GT ./. chr2 136374233 . T . . LowGQX END=136374333 GT ./. chr2 136379062 . A . . LowGQX END=136379181 GT ./. chr2 136380162 . A . . LowGQX END=136380314 GT ./. chr2 136389216 . C . . LowGQX END=136389368 GT ./. chr2 136389429 . A . . LowGQX END=136389574 GT ./. chr2 136393458 . A . . LowGQX END=136393571 GT ./. chr2 136393656 . A . . LowGQX END=136393756 GT ./. chr2 136396157 . C . . LowGQX END=136396257 GT ./. chr2 136396283 . A . . LowGQX END=136396383 GT ./. chr2 136396464 . A . . LowGQX END=136396724 GT ./. chr2 136399104 . A . . LowGQX END=136399363 GT ./. chr2 136402947 . A . . LowGQX END=136403100 GT ./. chr2 136407472 . C . . LowGQX END=136407574 GT ./. chr2 136409299 . G . . LowGQX END=136409605 GT ./. chr2 136418838 . A . . LowGQX END=136418966 GT ./. chr2 136422958 . C . . LowGQX END=136423058 GT ./. chr2 136432900 . A . . LowGQX END=136433059 GT ./. chr2 136437741 . A . . LowGQX END=136437897 GT ./. chr2 136467001 . A . . LowGQX END=136467109 GT ./. chr2 136467627 . A . . LowGQX END=136467804 GT ./. chr2 136473118 . A . . LowGQX END=136473267 GT ./. chr2 136479486 . A . . LowGQX END=136479586 GT ./. chr2 136480032 . T . . LowGQX END=136480132 GT ./. chr2 136481505 . A . . LowGQX END=136481865 GT ./. chr2 136499491 . A . . LowGQX END=136499591 GT ./. chr2 136505157 . G . . LowGQX END=136505336 GT ./. chr2 136505835 . A . . LowGQX END=136505942 GT ./. chr2 136511057 . T . . LowGQX END=136511209 GT ./. chr2 136511727 . A . . LowGQX END=136511850 GT ./. chr2 136513085 . A . . LowGQX END=136513264 GT ./. chr2 136519385 . A . . LowGQX END=136519536 GT ./. chr2 136527317 . G . . LowGQX END=136527417 GT ./. chr2 136528139 . A . . LowGQX END=136528329 GT ./. chr2 136529988 . A . . LowGQX END=136530120 GT ./. chr2 136533817 . A . . LowGQX END=136533977 GT ./. chr2 136536516 . A . . LowGQX END=136536652 GT ./. chr2 136537751 . A . . LowGQX END=136537958 GT ./. chr2 136540257 . C . . LowGQX END=136540460 GT ./. chr2 136545843 . A . . LowGQX END=136546166 GT ./. chr2 136547090 . C . . LowGQX END=136547420 GT ./. chr2 136548177 . A . . LowGQX END=136548503 GT ./. chr2 136552160 . C . . LowGQX END=136552397 GT ./. chr2 136555548 . T . . LowGQX END=136555760 GT ./. chr2 136558126 . G . . LowGQX END=136558431 GT ./. chr2 136561449 . T . . LowGQX END=136561750 GT ./. chr2 136562286 . G . . LowGQX END=136562679 GT ./. chr2 136564647 . G . . LowGQX END=136565018 GT ./. chr2 136565962 . A . . LowGQX END=136567615 GT ./. chr2 136569830 . T . . LowGQX END=136570578 GT ./. chr2 136574860 . G . . LowGQX END=136575683 GT ./. chr2 136579539 . G . . LowGQX END=136579720 GT ./. chr2 136581420 . C . . LowGQX END=136581625 GT ./. chr2 136587112 . T . . LowGQX END=136587298 GT ./. chr2 136590630 . A . . LowGQX END=136590812 GT ./. chr2 136594049 . G . . LowGQX END=136594791 GT ./. chr2 136598403 . T . . LowGQX END=136598524 GT ./. chr2 136602113 . A . . LowGQX END=136602257 GT ./. chr2 136603805 . A . . LowGQX END=136603965 GT ./. chr2 136605621 . A . . LowGQX END=136605761 GT ./. chr2 136608970 . A . . LowGQX END=136609136 GT ./. chr2 136610355 . A . . LowGQX END=136610488 GT ./. chr2 136614296 . A . . LowGQX END=136614456 GT ./. chr2 136615465 . A . . LowGQX END=136615577 GT ./. chr2 136616869 . A . . LowGQX END=136617015 GT ./. chr2 136620175 . A . . LowGQX END=136620321 GT ./. chr2 136622581 . A . . LowGQX END=136622771 GT ./. chr2 136623700 . A . . LowGQX END=136623850 GT ./. chr2 136624131 . A . . LowGQX END=136624301 GT ./. chr2 136626179 . A . . LowGQX END=136626433 GT ./. chr2 136627819 . A . . LowGQX END=136627934 GT ./. chr2 136630265 . A . . LowGQX END=136630416 GT ./. chr2 136633827 . A . . LowGQX END=136633938 GT ./. chr2 136664882 . G . . LowGQX END=136664982 GT ./. chr2 136668695 . T . . LowGQX END=136668795 GT ./. chr2 136668950 . A . . LowGQX END=136669066 GT ./. chr2 136669994 . G . . LowGQX END=136670147 GT ./. chr2 136672011 . A . . LowGQX END=136672111 GT ./. chr2 136673794 . A . . LowGQX END=136673945 GT ./. chr2 136678021 . A . . LowGQX END=136678173 GT ./. chr2 136680312 . T . . LowGQX END=136680491 GT ./. chr2 136681955 . A . . LowGQX END=136682115 GT ./. chr2 136690333 . A . . LowGQX END=136690433 GT ./. chr2 136691471 . A . . LowGQX END=136691571 GT ./. chr2 136700930 . T . . LowGQX END=136701053 GT ./. chr2 136718964 . A . . LowGQX END=136719071 GT ./. chr2 136736841 . T . . LowGQX END=136736941 GT ./. chr2 136740895 . T . . LowGQX END=136741046 GT ./. chr2 136742971 . A . . LowGQX END=136743134 GT ./. chr2 136872388 . A . . LowGQX END=136873561 GT ./. chr2 136875553 . G . . LowGQX END=136875705 GT ./. chr2 137639748 . C . . LowGQX END=137639888 GT ./. chr2 137748435 . A . . LowGQX END=137748535 GT ./. chr2 137813989 . G . . LowGQX END=137814801 GT ./. chr2 137852442 . G . . LowGQX END=137852692 GT ./. chr2 137872662 . T . . LowGQX END=137872864 GT ./. chr2 137917782 . G . . LowGQX END=137917939 GT ./. chr2 137928310 . G . . LowGQX END=137928509 GT ./. chr2 137988613 . G . . LowGQX END=137988806 GT ./. chr2 137990468 . G . . LowGQX END=137990704 GT ./. chr2 138000026 . G . . LowGQX END=138000143 GT ./. chr2 138030102 . G . . LowGQX END=138030282 GT ./. chr2 138033492 . G . . LowGQX END=138033597 GT ./. chr2 138163182 . G . . LowGQX END=138163378 GT ./. chr2 138169178 . G . . LowGQX END=138169466 GT ./. chr2 138208414 . G . . LowGQX END=138208596 GT ./. chr2 138236999 . C . . LowGQX END=138237099 GT ./. chr2 138296012 . C . . LowGQX END=138296112 GT ./. chr2 138320787 . A . . LowGQX END=138320925 GT ./. chr2 138329975 . G . . LowGQX END=138330127 GT ./. chr2 138373744 . G . . LowGQX END=138373887 GT ./. chr2 138375961 . G . . LowGQX END=138376078 GT ./. chr2 138378178 . G . . LowGQX END=138378297 GT ./. chr2 138400057 . G . . LowGQX END=138400204 GT ./. chr2 138413070 . G . . LowGQX END=138413231 GT ./. chr2 138414365 . G . . LowGQX END=138414540 GT ./. chr2 138414633 . A . . LowGQX END=138414733 GT ./. chr2 138417225 . C . . LowGQX END=138417325 GT ./. chr2 138420952 . G . . LowGQX END=138421146 GT ./. chr2 138425338 . A . . LowGQX END=138425438 GT ./. chr2 138434033 . T . . LowGQX END=138434185 GT ./. chr2 138722060 . A . . LowGQX END=138722201 GT ./. chr2 138724575 . G . . LowGQX END=138724727 GT ./. chr2 138727712 . A . . LowGQX END=138727812 GT ./. chr2 138738784 . A . . LowGQX END=138738979 GT ./. chr2 138758486 . A . . LowGQX END=138758598 GT ./. chr2 138759632 . A . . LowGQX END=138759767 GT ./. chr2 138762699 . T . . LowGQX END=138762799 GT ./. chr2 138771343 . A . . LowGQX END=138771703 GT ./. chr2 139307776 . A . . LowGQX END=139307876 GT ./. chr2 139308051 . A . . LowGQX END=139308177 GT ./. chr2 139308471 . A . . LowGQX END=139308627 GT ./. chr2 139310122 . A . . LowGQX END=139310254 GT ./. chr2 139312004 . T . . LowGQX END=139312104 GT ./. chr2 139316590 . A . . LowGQX END=139316772 GT ./. chr2 139316830 . A . . LowGQX END=139316930 GT ./. chr2 139318373 . A . . LowGQX END=139318543 GT ./. chr2 139322276 . A . . LowGQX END=139322423 GT ./. chr2 139322487 . G . . LowGQX END=139322587 GT ./. chr2 139326504 . A . . LowGQX END=139326653 GT ./. chr2 139428491 . A . . LowGQX END=139429236 GT ./. chr2 139537676 . C . . LowGQX END=139537836 GT ./. chr2 140990753 . G . . LowGQX END=140990898 GT ./. chr2 140992353 . A . . LowGQX END=140992456 GT ./. chr2 140995719 . A . . LowGQX END=140995868 GT ./. chr2 140997007 . T . . LowGQX END=140997107 GT ./. chr2 141004644 . G . . LowGQX END=141004744 GT ./. chr2 141026837 . T . . LowGQX END=141026951 GT ./. chr2 141027809 . A . . LowGQX END=141027918 GT ./. chr2 141031971 . A . . LowGQX END=141032170 GT ./. chr2 141055375 . A . . LowGQX END=141055541 GT ./. chr2 141072502 . A . . LowGQX END=141072671 GT ./. chr2 141079530 . A . . LowGQX END=141079700 GT ./. chr2 141081460 . A . . LowGQX END=141081638 GT ./. chr2 141083329 . A . . LowGQX END=141083450 GT ./. chr2 141091969 . A . . LowGQX END=141092131 GT ./. chr2 141093182 . A . . LowGQX END=141093410 GT ./. chr2 141108304 . T . . LowGQX END=141108624 GT ./. chr2 141110520 . A . . LowGQX END=141110690 GT ./. chr2 141113869 . C . . LowGQX END=141114048 GT ./. chr2 141115546 . A . . LowGQX END=141115688 GT ./. chr2 141116388 . A . . LowGQX END=141116518 GT ./. chr2 141122228 . A . . LowGQX END=141122355 GT ./. chr2 141128277 . A . . LowGQX END=141128414 GT ./. chr2 141128746 . A . . LowGQX END=141128857 GT ./. chr2 141130535 . G . . LowGQX END=141130709 GT ./. chr2 141135747 . A . . LowGQX END=141135858 GT ./. chr2 141143410 . C . . LowGQX END=141143581 GT ./. chr2 141200071 . A . . LowGQX END=141200195 GT ./. chr2 141201897 . A . . LowGQX END=141202021 GT ./. chr2 141202130 . A . . LowGQX END=141202251 GT ./. chr2 141208075 . T . . LowGQX END=141208234 GT ./. chr2 141214022 . A . . LowGQX END=141214175 GT ./. chr2 141215030 . A . . LowGQX END=141215223 GT ./. chr2 141232705 . A . . LowGQX END=141232909 GT ./. chr2 141242910 . A . . LowGQX END=141243096 GT ./. chr2 141245134 . C . . LowGQX END=141245354 GT ./. chr2 141250170 . G . . LowGQX END=141250270 GT ./. chr2 141253132 . A . . LowGQX END=141253320 GT ./. chr2 141259254 . A . . LowGQX END=141259446 GT ./. chr2 141260530 . A . . LowGQX END=141260675 GT ./. chr2 141264363 . A . . LowGQX END=141264490 GT ./. chr2 141267495 . A . . LowGQX END=141267628 GT ./. chr2 141272220 . A . . LowGQX END=141272344 GT ./. chr2 141274406 . C . . LowGQX END=141274583 GT ./. chr2 141283411 . A . . LowGQX END=141283565 GT ./. chr2 141283804 . A . . LowGQX END=141283922 GT ./. chr2 141291588 . A . . LowGQX END=141291712 GT ./. chr2 141294108 . A . . LowGQX END=141294281 GT ./. chr2 141298540 . A . . LowGQX END=141298670 GT ./. chr2 141299346 . A . . LowGQX END=141299543 GT ./. chr2 141356198 . A . . LowGQX END=141356407 GT ./. chr2 141359017 . A . . LowGQX END=141359211 GT ./. chr2 141457806 . T . . LowGQX END=141458196 GT ./. chr2 141459288 . A . . LowGQX END=141459417 GT ./. chr2 141459708 . A . . LowGQX END=141459864 GT ./. chr2 141459994 . A . . LowGQX END=141460125 GT ./. chr2 141473540 . A . . LowGQX END=141473674 GT ./. chr2 141474249 . A . . LowGQX END=141474388 GT ./. chr2 141526740 . G . . LowGQX END=141526916 GT ./. chr2 141528448 . A . . LowGQX END=141528618 GT ./. chr2 141533615 . A . . LowGQX END=141533844 GT ./. chr2 141571194 . A . . LowGQX END=141571378 GT ./. chr2 141597498 . A . . LowGQX END=141597658 GT ./. chr2 141598485 . A . . LowGQX END=141598664 GT ./. chr2 141607669 . A . . LowGQX END=141607901 GT ./. chr2 141609179 . C . . LowGQX END=141609355 GT ./. chr2 141625157 . A . . LowGQX END=141625406 GT ./. chr2 141625666 . A . . LowGQX END=141625835 GT ./. chr2 141641384 . A . . LowGQX END=141641593 GT ./. chr2 141643705 . A . . LowGQX END=141643907 GT ./. chr2 141660487 . A . . LowGQX END=141660737 GT ./. chr2 141665444 . A . . LowGQX END=141665649 GT ./. chr2 141680532 . A . . LowGQX END=141680719 GT ./. chr2 141707802 . A . . LowGQX END=141707974 GT ./. chr2 141709420 . G . . LowGQX END=141709520 GT ./. chr2 141739727 . A . . LowGQX END=141739848 GT ./. chr2 141747099 . A . . LowGQX END=141747229 GT ./. chr2 141751562 . A . . LowGQX END=141751707 GT ./. chr2 141762902 . A . . LowGQX END=141763029 GT ./. chr2 141771123 . A . . LowGQX END=141771317 GT ./. chr2 141773263 . A . . LowGQX END=141773487 GT ./. chr2 141777489 . A . . LowGQX END=141777674 GT ./. chr2 141806553 . A . . LowGQX END=141806794 GT ./. chr2 141812683 . A . . LowGQX END=141812831 GT ./. chr2 141816410 . A . . LowGQX END=141816626 GT ./. chr2 141819588 . C . . LowGQX END=141819845 GT ./. chr2 141945958 . T . . LowGQX END=141946155 GT ./. chr2 141986680 . G . . LowGQX END=141987020 GT ./. chr2 142004753 . A . . LowGQX END=142004926 GT ./. chr2 142012039 . G . . LowGQX END=142012213 GT ./. chr2 142044230 . T . . LowGQX END=142044390 GT ./. chr2 142237888 . G . . LowGQX END=142238165 GT ./. chr2 142567846 . A . . LowGQX END=142567973 GT ./. chr2 142888215 . A . . LowGQX END=142888410 GT ./. chr2 143642886 . T . . LowGQX END=143643147 GT ./. chr2 143676127 . C . . LowGQX END=143676350 GT ./. chr2 143685177 . C . . LowGQX END=143685362 GT ./. chr2 143704665 . T . . LowGQX END=143704765 GT ./. chr2 143712328 . T . . LowGQX END=143712492 GT ./. chr2 143713721 . A . . LowGQX END=143713895 GT ./. chr2 143715159 . A . . LowGQX END=143715336 GT ./. chr2 143718142 . T . . LowGQX END=143718391 GT ./. chr2 143742602 . T . . LowGQX END=143742803 GT ./. chr2 143743466 . T . . LowGQX END=143743642 GT ./. chr2 143746335 . T . . LowGQX END=143746487 GT ./. chr2 143787142 . A . . LowGQX END=143787290 GT ./. chr2 143790754 . G . . LowGQX END=143790942 GT ./. chr2 143797946 . T . . LowGQX END=143798279 GT ./. chr2 143799565 . T . . LowGQX END=143799793 GT ./. chr2 143913028 . C . . LowGQX END=143913227 GT ./. chr2 143959631 . T . . LowGQX END=143959788 GT ./. chr2 143973934 . A . . LowGQX END=143974034 GT ./. chr2 143986144 . C . . LowGQX END=143986244 GT ./. chr2 143993481 . A . . LowGQX END=143993581 GT ./. chr2 144008075 . T . . LowGQX END=144008175 GT ./. chr2 144193168 . A . . LowGQX END=144193328 GT ./. chr2 144194440 . T . . LowGQX END=144194629 GT ./. chr2 144244940 . A . . LowGQX END=144245067 GT ./. chr2 144276833 . A . . LowGQX END=144276936 GT ./. chr2 144313966 . T . . LowGQX END=144314066 GT ./. chr2 144345250 . C . . LowGQX END=144345350 GT ./. chr2 144381700 . A . . LowGQX END=144381839 GT ./. chr2 144460986 . A . . LowGQX END=144461096 GT ./. chr2 144525556 . A . . LowGQX END=144525744 GT ./. chr2 144704611 . C . . LowGQX END=144704711 GT ./. chr2 144709545 . C . . LowGQX END=144709645 GT ./. chr2 144710268 . T . . LowGQX END=144710426 GT ./. chr2 144714760 . A . . LowGQX END=144714909 GT ./. chr2 144728168 . T . . LowGQX END=144728332 GT ./. chr2 144764745 . T . . LowGQX END=144765105 GT ./. chr2 144899447 . A . . LowGQX END=144899625 GT ./. chr2 144903137 . A . . LowGQX END=144903309 GT ./. chr2 144934694 . G . . LowGQX END=144934794 GT ./. chr2 144936469 . C . . LowGQX END=144936569 GT ./. chr2 144966168 . A . . LowGQX END=144966351 GT ./. chr2 145121021 . A . . LowGQX END=145121185 GT ./. chr2 145146396 . A . . LowGQX END=145146496 GT ./. chr2 145146967 . G . . LowGQX END=145147647 GT ./. chr2 145153928 . A . . LowGQX END=145154211 GT ./. chr2 145155363 . A . . LowGQX END=145155521 GT ./. chr2 145155817 . A . . LowGQX END=145157889 GT ./. chr2 145158715 . C . . LowGQX END=145158926 GT ./. chr2 145161432 . T . . LowGQX END=145161749 GT ./. chr2 145162352 . G . . LowGQX END=145162643 GT ./. chr2 145181876 . A . . LowGQX END=145182037 GT ./. chr2 145182312 . A . . LowGQX END=145182486 GT ./. chr2 145187258 . G . . LowGQX END=145187645 GT ./. chr2 145268951 . A . . LowGQX END=145271365 GT ./. chr2 145274794 . G . . LowGQX END=145275002 GT ./. chr2 145275185 . G . . LowGQX END=145275285 GT ./. chr2 145277505 . C . . LowGQX END=145277959 GT ./. chr2 147345541 . A . . LowGQX END=147346351 GT ./. chr2 147596924 . A . . LowGQX END=147597024 GT ./. chr2 148602700 . G . . LowGQX END=148602800 GT ./. chr2 148653868 . A . . LowGQX END=148654080 GT ./. chr2 148657025 . A . . LowGQX END=148657139 GT ./. chr2 148657311 . A . . LowGQX END=148657470 GT ./. chr2 148672718 . C . . LowGQX END=148672938 GT ./. chr2 148674850 . A . . LowGQX END=148675030 GT ./. chr2 148676014 . A . . LowGQX END=148676164 GT ./. chr2 148677797 . A . . LowGQX END=148677916 GT ./. chr2 148680540 . A . . LowGQX END=148680683 GT ./. chr2 148683598 . A . . LowGQX END=148683733 GT ./. chr2 148684637 . T . . LowGQX END=148684846 GT ./. chr2 148693028 . T . . LowGQX END=148693319 GT ./. chr2 148695664 . A . . LowGQX END=148696014 GT ./. chr2 148696658 . A . . LowGQX END=148696869 GT ./. chr2 148700954 . T . . LowGQX END=148701143 GT ./. chr2 148705569 . G . . LowGQX END=148705845 GT ./. chr2 148709891 . T . . LowGQX END=148710145 GT ./. chr2 148712865 . A . . LowGQX END=148713016 GT ./. chr2 148715816 . A . . LowGQX END=148716004 GT ./. chr2 148716309 . A . . LowGQX END=148716487 GT ./. chr2 148730257 . A . . LowGQX END=148730450 GT ./. chr2 148730965 . G . . LowGQX END=148731145 GT ./. chr2 148733420 . A . . LowGQX END=148733579 GT ./. chr2 149216277 . G . . LowGQX END=149216492 GT ./. chr2 149220100 . A . . LowGQX END=149220305 GT ./. chr2 149221257 . T . . LowGQX END=149221540 GT ./. chr2 149225859 . A . . LowGQX END=149228100 GT ./. chr2 149240628 . A . . LowGQX END=149241705 GT ./. chr2 149243260 . G . . LowGQX END=149243571 GT ./. chr2 149246904 . G . . LowGQX END=149248215 GT ./. chr2 149259954 . T . . LowGQX END=149260130 GT ./. chr2 149267578 . G . . LowGQX END=149267756 GT ./. chr2 149270388 . G . . LowGQX END=149270562 GT ./. chr2 149402556 . G . . LowGQX END=149402740 GT ./. chr2 149447782 . G . . LowGQX END=149447943 GT ./. chr2 149449087 . G . . LowGQX END=149449187 GT ./. chr2 149449190 . G . . LowGQX END=149449408 GT ./. chr2 149501190 . G . . LowGQX END=149501337 GT ./. chr2 149511495 . G . . LowGQX END=149511703 GT ./. chr2 149519350 . G . . LowGQX END=149519530 GT ./. chr2 149520238 . G . . LowGQX END=149520372 GT ./. chr2 149522523 . G . . LowGQX END=149522716 GT ./. chr2 149526715 . T . . LowGQX END=149526815 GT ./. chr2 149528360 . G . . LowGQX END=149528507 GT ./. chr2 149528612 . G . . LowGQX END=149528957 GT ./. chr2 149539212 . G . . LowGQX END=149539350 GT ./. chr2 149541165 . G . . LowGQX END=149541326 GT ./. chr2 149542236 . G . . LowGQX END=149542571 GT ./. chr2 149543860 . C . . LowGQX END=149543960 GT ./. chr2 149633136 . C . . LowGQX END=149633313 GT ./. chr2 149679701 . T . . LowGQX END=149679801 GT ./. chr2 149686837 . T . . LowGQX END=149686937 GT ./. chr2 149791522 . G . . LowGQX END=149791622 GT ./. chr2 149793796 . A . . LowGQX END=149793903 GT ./. chr2 149798043 . A . . LowGQX END=149798198 GT ./. chr2 149798427 . G . . LowGQX END=149798578 GT ./. chr2 149799181 . T . . LowGQX END=149799281 GT ./. chr2 149803362 . T . . LowGQX END=149803538 GT ./. chr2 149804416 . C . . LowGQX END=149804516 GT ./. chr2 149806352 . G . . LowGQX END=149806458 GT ./. chr2 149806827 . G . . LowGQX END=149806977 GT ./. chr2 149818484 . G . . LowGQX END=149818634 GT ./. chr2 149829849 . G . . LowGQX END=149830026 GT ./. chr2 149835420 . T . . LowGQX END=149835520 GT ./. chr2 149837868 . G . . LowGQX END=149838076 GT ./. chr2 149840133 . G . . LowGQX END=149840281 GT ./. chr2 149847523 . G . . LowGQX END=149847713 GT ./. chr2 149850934 . G . . LowGQX END=149851053 GT ./. chr2 149853777 . G . . LowGQX END=149853927 GT ./. chr2 149854913 . G . . LowGQX END=149855024 GT ./. chr2 149856881 . A . . LowGQX END=149857039 GT ./. chr2 149857216 . G . . LowGQX END=149857316 GT ./. chr2 149861893 . A . . LowGQX END=149861993 GT ./. chr2 149864476 . G . . LowGQX END=149864582 GT ./. chr2 149866648 . G . . LowGQX END=149866866 GT ./. chr2 149868083 . G . . LowGQX END=149868191 GT ./. chr2 149987415 . T . . LowGQX END=149987515 GT ./. chr2 150016942 . G . . LowGQX END=150017042 GT ./. chr2 150017264 . T . . LowGQX END=150017364 GT ./. chr2 150043899 . C . . LowGQX END=150044088 GT ./. chr2 150061766 . G . . LowGQX END=150061919 GT ./. chr2 150062486 . A . . LowGQX END=150062586 GT ./. chr2 150064827 . G . . LowGQX END=150064927 GT ./. chr2 150069505 . G . . LowGQX END=150069637 GT ./. chr2 150071059 . G . . LowGQX END=150071225 GT ./. chr2 150294221 . C . . LowGQX END=150294343 GT ./. chr2 150305561 . A . . LowGQX END=150305664 GT ./. chr2 150320574 . A . . LowGQX END=150320734 GT ./. chr2 150325157 . A . . LowGQX END=150325292 GT ./. chr2 150327195 . A . . LowGQX END=150327367 GT ./. chr2 150426437 . T . . LowGQX END=150426734 GT ./. chr2 150427548 . A . . LowGQX END=150427737 GT ./. chr2 150428692 . G . . LowGQX END=150428846 GT ./. chr2 150432174 . T . . LowGQX END=150432407 GT ./. chr2 150432900 . A . . LowGQX END=150433108 GT ./. chr2 150435894 . C . . LowGQX END=150436214 GT ./. chr2 150438590 . T . . LowGQX END=150438837 GT ./. chr2 150443537 . G . . LowGQX END=150443663 GT ./. chr2 151326499 . A . . LowGQX END=151326755 GT ./. chr2 151328139 . A . . LowGQX END=151328278 GT ./. chr2 151331387 . G . . LowGQX END=151331501 GT ./. chr2 151343202 . T . . LowGQX END=151343302 GT ./. chr2 151343780 . A . . LowGQX END=151343934 GT ./. chr2 151857823 . G . . LowGQX END=151857923 GT ./. chr2 151890314 . T . . LowGQX END=151890414 GT ./. chr2 151900282 . C . . LowGQX END=151900388 GT ./. chr2 151904155 . T . . LowGQX END=151904255 GT ./. chr2 152107418 . T . . LowGQX END=152108181 GT ./. chr2 152109267 . A . . LowGQX END=152109372 GT ./. chr2 152112045 . A . . LowGQX END=152112260 GT ./. chr2 152117819 . G . . LowGQX END=152118024 GT ./. chr2 152118131 . A . . LowGQX END=152118291 GT ./. chr2 152127205 . G . . LowGQX END=152127405 GT ./. chr2 152128088 . G . . LowGQX END=152128249 GT ./. chr2 152131996 . A . . LowGQX END=152132187 GT ./. chr2 152132260 . T . . LowGQX END=152132381 GT ./. chr2 152135289 . C . . LowGQX END=152135507 GT ./. chr2 152138400 . T . . LowGQX END=152138560 GT ./. chr2 152139320 . C . . LowGQX END=152139473 GT ./. chr2 152214178 . G . . LowGQX END=152214278 GT ./. chr2 152220455 . A . . LowGQX END=152220597 GT ./. chr2 152222568 . A . . LowGQX END=152222734 GT ./. chr2 152226532 . A . . LowGQX END=152226765 GT ./. chr2 152230034 . A . . LowGQX END=152230134 GT ./. chr2 152235876 . A . . LowGQX END=152236050 GT ./. chr2 152266399 . C . . LowGQX END=152266559 GT ./. chr2 152266936 . A . . LowGQX END=152267044 GT ./. chr2 152267764 . G . . LowGQX END=152267864 GT ./. chr2 152271335 . A . . LowGQX END=152271436 GT ./. chr2 152273073 . A . . LowGQX END=152273253 GT ./. chr2 152273319 . A . . LowGQX END=152273419 GT ./. chr2 152276702 . A . . LowGQX END=152276896 GT ./. chr2 152279461 . C . . LowGQX END=152279612 GT ./. chr2 152285256 . A . . LowGQX END=152285439 GT ./. chr2 152289589 . A . . LowGQX END=152289745 GT ./. chr2 152291975 . A . . LowGQX END=152292097 GT ./. chr2 152293339 . A . . LowGQX END=152293520 GT ./. chr2 152293753 . A . . LowGQX END=152293868 GT ./. chr2 152295180 . G . . LowGQX END=152295280 GT ./. chr2 152296539 . A . . LowGQX END=152296699 GT ./. chr2 152298357 . C . . LowGQX END=152298513 GT ./. chr2 152299759 . A . . LowGQX END=152299859 GT ./. chr2 152300041 . A . . LowGQX END=152300226 GT ./. chr2 152301850 . A . . LowGQX END=152301962 GT ./. chr2 152302917 . T . . LowGQX END=152303128 GT ./. chr2 152308058 . T . . LowGQX END=152308222 GT ./. chr2 152311407 . A . . LowGQX END=152311676 GT ./. chr2 152313010 . C . . LowGQX END=152313164 GT ./. chr2 152314273 . A . . LowGQX END=152314480 GT ./. chr2 152315323 . A . . LowGQX END=152315427 GT ./. chr2 152316462 . G . . LowGQX END=152316636 GT ./. chr2 152317650 . A . . LowGQX END=152317860 GT ./. chr2 152318747 . T . . LowGQX END=152318847 GT ./. chr2 152318904 . T . . LowGQX END=152319004 GT ./. chr2 152319396 . A . . LowGQX END=152322637 GT ./. chr2 152324512 . A . . LowGQX END=152324663 GT ./. chr2 152324977 . C . . LowGQX END=152325077 GT ./. chr2 152325153 . A . . LowGQX END=152325273 GT ./. chr2 152326223 . A . . LowGQX END=152326381 GT ./. chr2 152330426 . A . . LowGQX END=152330589 GT ./. chr2 152331298 . C . . LowGQX END=152331638 GT ./. chr2 152342273 . C . . LowGQX END=152342448 GT ./. chr2 152346448 . A . . LowGQX END=152346592 GT ./. chr2 152346885 . C . . LowGQX END=152347033 GT ./. chr2 152348153 . T . . LowGQX END=152348290 GT ./. chr2 152348611 . C . . LowGQX END=152348796 GT ./. chr2 152348900 . C . . LowGQX END=152349025 GT ./. chr2 152349823 . T . . LowGQX END=152349960 GT ./. chr2 152350265 . A . . LowGQX END=152350382 GT ./. chr2 152350631 . T . . LowGQX END=152350791 GT ./. chr2 152352746 . T . . LowGQX END=152352883 GT ./. chr2 152353451 . G . . LowGQX END=152353604 GT ./. chr2 152354136 . G . . LowGQX END=152354289 GT ./. chr2 152354706 . A . . LowGQX END=152354867 GT ./. chr2 152355748 . T . . LowGQX END=152355960 GT ./. chr2 152357861 . T . . LowGQX END=152357998 GT ./. chr2 152359263 . A . . LowGQX END=152359423 GT ./. chr2 152359819 . T . . LowGQX END=152359979 GT ./. chr2 152361991 . C . . LowGQX END=152362108 GT ./. chr2 152362636 . A . . LowGQX END=152362773 GT ./. chr2 152363385 . T . . LowGQX END=152363545 GT ./. chr2 152364491 . C . . LowGQX END=152364624 GT ./. chr2 152369206 . T . . LowGQX END=152369359 GT ./. chr2 152370093 . C . . LowGQX END=152370221 GT ./. chr2 152370831 . C . . LowGQX END=152370957 GT ./. chr2 152371331 . C . . LowGQX END=152371457 GT ./. chr2 152372972 . C . . LowGQX END=152373095 GT ./. chr2 152374794 . A . . LowGQX END=152374937 GT ./. chr2 152375478 . C . . LowGQX END=152375591 GT ./. chr2 152376171 . C . . LowGQX END=152376287 GT ./. chr2 152380824 . C . . LowGQX END=152380947 GT ./. chr2 152381028 . C . . LowGQX END=152381150 GT ./. chr2 152381642 . A . . LowGQX END=152381802 GT ./. chr2 152382447 . A . . LowGQX END=152382583 GT ./. chr2 152382671 . C . . LowGQX END=152382794 GT ./. chr2 152383404 . G . . LowGQX END=152383537 GT ./. chr2 152383994 . C . . LowGQX END=152384117 GT ./. chr2 152385686 . A . . LowGQX END=152385846 GT ./. chr2 152387507 . C . . LowGQX END=152387632 GT ./. chr2 152388288 . A . . LowGQX END=152388411 GT ./. chr2 152389955 . C . . LowGQX END=152390061 GT ./. chr2 152390728 . C . . LowGQX END=152390851 GT ./. chr2 152392197 . A . . LowGQX END=152392310 GT ./. chr2 152393645 . C . . LowGQX END=152393768 GT ./. chr2 152394385 . C . . LowGQX END=152394508 GT ./. chr2 152394653 . C . . LowGQX END=152394776 GT ./. chr2 152396857 . C . . LowGQX END=152396970 GT ./. chr2 152397210 . C . . LowGQX END=152397333 GT ./. chr2 152397960 . C . . LowGQX END=152398083 GT ./. chr2 152402401 . C . . LowGQX END=152402527 GT ./. chr2 152402858 . C . . LowGQX END=152402978 GT ./. chr2 152403942 . C . . LowGQX END=152404065 GT ./. chr2 152404147 . C . . LowGQX END=152404253 GT ./. chr2 152404786 . C . . LowGQX END=152404946 GT ./. chr2 152406132 . G . . LowGQX END=152406255 GT ./. chr2 152408216 . A . . LowGQX END=152408376 GT ./. chr2 152409185 . C . . LowGQX END=152409298 GT ./. chr2 152409874 . A . . LowGQX END=152410034 GT ./. chr2 152410341 . C . . LowGQX END=152410540 GT ./. chr2 152411404 . G . . LowGQX END=152411562 GT ./. chr2 152417070 . A . . LowGQX END=152417214 GT ./. chr2 152417500 . A . . LowGQX END=152417623 GT ./. chr2 152417721 . C . . LowGQX END=152417844 GT ./. chr2 152418623 . C . . LowGQX END=152418746 GT ./. chr2 152419124 . C . . LowGQX END=152419323 GT ./. chr2 152420119 . C . . LowGQX END=152420247 GT ./. chr2 152420301 . A . . LowGQX END=152420445 GT ./. chr2 152421550 . G . . LowGQX END=152421663 GT ./. chr2 152421987 . C . . LowGQX END=152422120 GT ./. chr2 152422192 . G . . LowGQX END=152422335 GT ./. chr2 152423681 . C . . LowGQX END=152423994 GT ./. chr2 152424584 . C . . LowGQX END=152424709 GT ./. chr2 152424829 . C . . LowGQX END=152424951 GT ./. chr2 152425091 . A . . LowGQX END=152425231 GT ./. chr2 152425781 . C . . LowGQX END=152425904 GT ./. chr2 152426594 . C . . LowGQX END=152426907 GT ./. chr2 152427010 . C . . LowGQX END=152427133 GT ./. chr2 152432171 . A . . LowGQX END=152432331 GT ./. chr2 152432664 . C . . LowGQX END=152432869 GT ./. chr2 152435840 . C . . LowGQX END=152436170 GT ./. chr2 152437273 . G . . LowGQX END=152437435 GT ./. chr2 152437959 . A . . LowGQX END=152438119 GT ./. chr2 152438966 . A . . LowGQX END=152439186 GT ./. chr2 152439957 . T . . LowGQX END=152440287 GT ./. chr2 152441983 . A . . LowGQX END=152442145 GT ./. chr2 152442879 . G . . LowGQX END=152443041 GT ./. chr2 152443876 . G . . LowGQX END=152444092 GT ./. chr2 152446391 . G . . LowGQX END=152446721 GT ./. chr2 152447825 . T . . LowGQX END=152448054 GT ./. chr2 152448510 . A . . LowGQX END=152448653 GT ./. chr2 152449518 . A . . LowGQX END=152449738 GT ./. chr2 152450509 . T . . LowGQX END=152450839 GT ./. chr2 152452536 . A . . LowGQX END=152452698 GT ./. chr2 152453432 . G . . LowGQX END=152453594 GT ./. chr2 152454429 . G . . LowGQX END=152454645 GT ./. chr2 152456944 . G . . LowGQX END=152457274 GT ./. chr2 152458377 . G . . LowGQX END=152458539 GT ./. chr2 152459063 . A . . LowGQX END=152459223 GT ./. chr2 152460071 . A . . LowGQX END=152460291 GT ./. chr2 152461062 . T . . LowGQX END=152461392 GT ./. chr2 152463029 . A . . LowGQX END=152463244 GT ./. chr2 152463978 . G . . LowGQX END=152464140 GT ./. chr2 152464975 . G . . LowGQX END=152465191 GT ./. chr2 152466322 . C . . LowGQX END=152466635 GT ./. chr2 152467029 . C . . LowGQX END=152467154 GT ./. chr2 152467238 . T . . LowGQX END=152467381 GT ./. chr2 152468699 . C . . LowGQX END=152468904 GT ./. chr2 152470789 . C . . LowGQX END=152471102 GT ./. chr2 152472480 . T . . LowGQX END=152472640 GT ./. chr2 152473877 . C . . LowGQX END=152473983 GT ./. chr2 152474768 . C . . LowGQX END=152474998 GT ./. chr2 152475964 . C . . LowGQX END=152476277 GT ./. chr2 152477432 . C . . LowGQX END=152477557 GT ./. chr2 152482047 . C . . LowGQX END=152482153 GT ./. chr2 152483515 . C . . LowGQX END=152483720 GT ./. chr2 152484036 . C . . LowGQX END=152484349 GT ./. chr2 152486052 . C . . LowGQX END=152486177 GT ./. chr2 152487201 . A . . LowGQX END=152487334 GT ./. chr2 152487656 . C . . LowGQX END=152487861 GT ./. chr2 152490167 . C . . LowGQX END=152490480 GT ./. chr2 152492705 . A . . LowGQX END=152492865 GT ./. chr2 152495756 . A . . LowGQX END=152495899 GT ./. chr2 152496370 . C . . LowGQX END=152496575 GT ./. chr2 152496868 . C . . LowGQX END=152497181 GT ./. chr2 152499087 . C . . LowGQX END=152499212 GT ./. chr2 152499278 . C . . LowGQX END=152499401 GT ./. chr2 152499663 . C . . LowGQX END=152499868 GT ./. chr2 152500331 . C . . LowGQX END=152500644 GT ./. chr2 152500981 . C . . LowGQX END=152501106 GT ./. chr2 152502643 . C . . LowGQX END=152502766 GT ./. chr2 152506689 . C . . LowGQX END=152506894 GT ./. chr2 152507087 . C . . LowGQX END=152507400 GT ./. chr2 152510480 . C . . LowGQX END=152510614 GT ./. chr2 152511776 . A . . LowGQX END=152511889 GT ./. chr2 152512330 . C . . LowGQX END=152512538 GT ./. chr2 152512666 . C . . LowGQX END=152512979 GT ./. chr2 152514456 . T . . LowGQX END=152514611 GT ./. chr2 152515511 . A . . LowGQX END=152515684 GT ./. chr2 152518648 . C . . LowGQX END=152518856 GT ./. chr2 152520061 . C . . LowGQX END=152520374 GT ./. chr2 152521014 . C . . LowGQX END=152521139 GT ./. chr2 152521245 . C . . LowGQX END=152521378 GT ./. chr2 152521846 . C . . LowGQX END=152522054 GT ./. chr2 152522603 . C . . LowGQX END=152522916 GT ./. chr2 152524317 . C . . LowGQX END=152524432 GT ./. chr2 152525540 . C . . LowGQX END=152525653 GT ./. chr2 152527536 . C . . LowGQX END=152527744 GT ./. chr2 152528882 . C . . LowGQX END=152529195 GT ./. chr2 152530955 . G . . LowGQX END=152531115 GT ./. chr2 152531740 . T . . LowGQX END=152531906 GT ./. chr2 152534078 . C . . LowGQX END=152534286 GT ./. chr2 152534389 . C . . LowGQX END=152534702 GT ./. chr2 152536234 . C . . LowGQX END=152536359 GT ./. chr2 152536424 . C . . LowGQX END=152536537 GT ./. chr2 152537243 . C . . LowGQX END=152537363 GT ./. chr2 152539140 . T . . LowGQX END=152539300 GT ./. chr2 152541291 . C . . LowGQX END=152541490 GT ./. chr2 152543932 . C . . LowGQX END=152544060 GT ./. chr2 152544139 . C . . LowGQX END=152544264 GT ./. chr2 152544805 . C . . LowGQX END=152544928 GT ./. chr2 152547152 . G . . LowGQX END=152547360 GT ./. chr2 152548350 . T . . LowGQX END=152548483 GT ./. chr2 152548572 . C . . LowGQX END=152548687 GT ./. chr2 152548746 . A . . LowGQX END=152548877 GT ./. chr2 152548905 . A . . LowGQX END=152549005 GT ./. chr2 152550836 . C . . LowGQX END=152550954 GT ./. chr2 152551035 . C . . LowGQX END=152551160 GT ./. chr2 152552051 . G . . LowGQX END=152552204 GT ./. chr2 152553150 . C . . LowGQX END=152553250 GT ./. chr2 152553661 . C . . LowGQX END=152553784 GT ./. chr2 152553863 . C . . LowGQX END=152553972 GT ./. chr2 152554057 . C . . LowGQX END=152554163 GT ./. chr2 152563354 . G . . LowGQX END=152563513 GT ./. chr2 152566164 . T . . LowGQX END=152566319 GT ./. chr2 152566930 . C . . LowGQX END=152567053 GT ./. chr2 152572603 . T . . LowGQX END=152572703 GT ./. chr2 152573892 . T . . LowGQX END=152574052 GT ./. chr2 152579895 . C . . LowGQX END=152580018 GT ./. chr2 152580773 . C . . LowGQX END=152580896 GT ./. chr2 152581370 . C . . LowGQX END=152581493 GT ./. chr2 152581966 . C . . LowGQX END=152582091 GT ./. chr2 152584204 . C . . LowGQX END=152584421 GT ./. chr2 152586060 . C . . LowGQX END=152586220 GT ./. chr2 152589603 . T . . LowGQX END=152589703 GT ./. chr2 152659765 . A . . LowGQX END=152659865 GT ./. chr2 152663333 . A . . LowGQX END=152663489 GT ./. chr2 152667025 . C . . LowGQX END=152667125 GT ./. chr2 152668863 . T . . LowGQX END=152668963 GT ./. chr2 152670681 . A . . LowGQX END=152670833 GT ./. chr2 152671581 . C . . LowGQX END=152671734 GT ./. chr2 152684563 . C . . LowGQX END=152684718 GT ./. chr2 152695632 . C . . LowGQX END=152695745 GT ./. chr2 152695746 . G . . LowGQX END=152695799;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 152695800 . T . . LowGQX END=152695894 GT ./. chr2 152698416 . C . . LowGQX END=152698603 GT ./. chr2 152709930 . G . . LowGQX END=152710090 GT ./. chr2 152711737 . C . . LowGQX END=152711890 GT ./. chr2 152717184 . G . . LowGQX END=152717340 GT ./. chr2 152725660 . A . . LowGQX END=152725760 GT ./. chr2 152726718 . C . . LowGQX END=152727126 GT ./. chr2 152727276 . T . . LowGQX END=152727376 GT ./. chr2 152728701 . A . . LowGQX END=152728801 GT ./. chr2 152728879 . T . . LowGQX END=152729039 GT ./. chr2 152732939 . C . . LowGQX END=152733071 GT ./. chr2 152737243 . G . . LowGQX END=152737437 GT ./. chr2 152739754 . A . . LowGQX END=152739944 GT ./. chr2 152828012 . C . . LowGQX END=152828112 GT ./. chr2 152830145 . G . . LowGQX END=152830245 GT ./. chr2 152954826 . C . . LowGQX END=152955002 GT ./. chr2 152955089 . C . . LowGQX END=152955189 GT ./. chr2 152955390 . G . . LowGQX END=152955612 GT ./. chr2 152977086 . T . . LowGQX END=152977319 GT ./. chr2 152980278 . A . . LowGQX END=152980452 GT ./. chr2 152982710 . T . . LowGQX END=152982896 GT ./. chr2 152988605 . T . . LowGQX END=152988705 GT ./. chr2 152989681 . A . . LowGQX END=152989835 GT ./. chr2 152989908 . G . . LowGQX END=152990008 GT ./. chr2 152991961 . A . . LowGQX END=152992121 GT ./. chr2 153000339 . A . . LowGQX END=153000539 GT ./. chr2 153001387 . T . . LowGQX END=153001487 GT ./. chr2 153003674 . A . . LowGQX END=153003825 GT ./. chr2 153004536 . A . . LowGQX END=153004639 GT ./. chr2 153004727 . C . . LowGQX END=153004827 GT ./. chr2 153006652 . A . . LowGQX END=153006752 GT ./. chr2 153032087 . C . . LowGQX END=153032187 GT ./. chr2 153192066 . G . . LowGQX END=153192235 GT ./. chr2 153378389 . G . . LowGQX END=153378606 GT ./. chr2 153399243 . C . . LowGQX END=153399343 GT ./. chr2 153405523 . C . . LowGQX END=153405623 GT ./. chr2 153415246 . C . . LowGQX END=153415346 GT ./. chr2 153417396 . G . . LowGQX END=153417550 GT ./. chr2 153431649 . G . . LowGQX END=153431759 GT ./. chr2 153435390 . T . . LowGQX END=153435490 GT ./. chr2 153437467 . C . . LowGQX END=153437567 GT ./. chr2 153463840 . A . . LowGQX END=153463940 GT ./. chr2 153468008 . G . . LowGQX END=153468120 GT ./. chr2 153471364 . G . . LowGQX END=153471544 GT ./. chr2 153473604 . G . . LowGQX END=153473707 GT ./. chr2 153475359 . G . . LowGQX END=153475673 GT ./. chr2 153475976 . C . . LowGQX END=153476233 GT ./. chr2 153479012 . T . . LowGQX END=153479112 GT ./. chr2 153481951 . G . . LowGQX END=153482077 GT ./. chr2 153483038 . G . . LowGQX END=153483242 GT ./. chr2 153484812 . G . . LowGQX END=153485048 GT ./. chr2 153486154 . T . . LowGQX END=153486254 GT ./. chr2 153486329 . T . . LowGQX END=153486429 GT ./. chr2 153488521 . G . . LowGQX END=153488652 GT ./. chr2 153492940 . G . . LowGQX END=153493105 GT ./. chr2 153494086 . G . . LowGQX END=153494189 GT ./. chr2 153496471 . G . . LowGQX END=153496571 GT ./. chr2 153497304 . G . . LowGQX END=153497474 GT ./. chr2 153499929 . G . . LowGQX END=153500029 GT ./. chr2 153501945 . T . . LowGQX END=153502045 GT ./. chr2 153504248 . T . . LowGQX END=153504420 GT ./. chr2 153512816 . T . . LowGQX END=153512916 GT ./. chr2 153514402 . C . . LowGQX END=153514535 GT ./. chr2 153515443 . A . . LowGQX END=153515543 GT ./. chr2 153515605 . A . . LowGQX END=153515705 GT ./. chr2 153515777 . C . . LowGQX END=153515877 GT ./. chr2 153519115 . A . . LowGQX END=153519266 GT ./. chr2 153519548 . C . . LowGQX END=153519687 GT ./. chr2 153520168 . C . . LowGQX END=153520286 GT ./. chr2 153520389 . C . . LowGQX END=153520494 GT ./. chr2 153520601 . C . . LowGQX END=153520767 GT ./. chr2 153525650 . C . . LowGQX END=153525785 GT ./. chr2 153526713 . A . . LowGQX END=153526924 GT ./. chr2 153527786 . C . . LowGQX END=153527946 GT ./. chr2 153528972 . C . . LowGQX END=153529138 GT ./. chr2 153529474 . A . . LowGQX END=153529574 GT ./. chr2 153530111 . C . . LowGQX END=153530221 GT ./. chr2 153532918 . C . . LowGQX END=153533300 GT ./. chr2 153533432 . A . . LowGQX END=153533532 GT ./. chr2 153533927 . A . . LowGQX END=153534027 GT ./. chr2 153535547 . A . . LowGQX END=153535647 GT ./. chr2 153535698 . A . . LowGQX END=153535798 GT ./. chr2 153535850 . C . . LowGQX END=153535987 GT ./. chr2 153537689 . T . . LowGQX END=153537851 GT ./. chr2 153547434 . A . . LowGQX END=153547534 GT ./. chr2 153549509 . C . . LowGQX END=153549609 GT ./. chr2 153549938 . A . . LowGQX END=153550038 GT ./. chr2 153551046 . A . . LowGQX END=153551146 GT ./. chr2 153572508 . C . . LowGQX END=153572641 GT ./. chr2 153573743 . C . . LowGQX END=153573976 GT ./. chr2 153575137 . C . . LowGQX END=153575541 GT ./. chr2 153576386 . T . . LowGQX END=153576486 GT ./. chr2 153576971 . A . . LowGQX END=153577103 GT ./. chr2 153589014 . A . . LowGQX END=153589114 GT ./. chr2 153591506 . A . . LowGQX END=153591643 GT ./. chr2 153616258 . T . . LowGQX END=153616358 GT ./. chr2 154334748 . G . . LowGQX END=154335082 GT ./. chr2 154801009 . A . . LowGQX END=154801155 GT ./. chr2 154996848 . A . . LowGQX END=154997021 GT ./. chr2 155092510 . C . . LowGQX END=155092610 GT ./. chr2 155098541 . A . . LowGQX END=155098712 GT ./. chr2 155099209 . A . . LowGQX END=155099421 GT ./. chr2 155102323 . A . . LowGQX END=155102498 GT ./. chr2 155115482 . C . . LowGQX END=155115702 GT ./. chr2 155157920 . A . . LowGQX END=155158105 GT ./. chr2 155252501 . A . . LowGQX END=155252645 GT ./. chr2 155265484 . T . . LowGQX END=155265694 GT ./. chr2 155294041 . A . . LowGQX END=155294371 GT ./. chr2 155295102 . A . . LowGQX END=155295241 GT ./. chr2 155302294 . C . . LowGQX END=155302394 GT ./. chr2 155303080 . A . . LowGQX END=155303266 GT ./. chr2 155306921 . A . . LowGQX END=155307066 GT ./. chr2 155555286 . T . . LowGQX END=155555992 GT ./. chr2 155566113 . A . . LowGQX END=155566340 GT ./. chr2 155711237 . A . . LowGQX END=155711828 GT ./. chr2 157182205 . T . . LowGQX END=157182564 GT ./. chr2 157182611 . A . . LowGQX END=157182892 GT ./. chr2 157183179 . C . . LowGQX END=157183484 GT ./. chr2 157184312 . C . . LowGQX END=157184578 GT ./. chr2 157184865 . G . . LowGQX END=157185097 GT ./. chr2 157185784 . C . . LowGQX END=157186750 GT ./. chr2 157188957 . A . . LowGQX END=157189057 GT ./. chr2 157332567 . C . . LowGQX END=157332771 GT ./. chr2 157352057 . G . . LowGQX END=157352157 GT ./. chr2 157352505 . T . . LowGQX END=157352779 GT ./. chr2 157367257 . A . . LowGQX END=157367484 GT ./. chr2 157368681 . A . . LowGQX END=157368881 GT ./. chr2 157369794 . A . . LowGQX END=157370060 GT ./. chr2 157406069 . C . . LowGQX END=157406336 GT ./. chr2 157407063 . G . . LowGQX END=157407310 GT ./. chr2 157413850 . T . . LowGQX END=157414146 GT ./. chr2 157425286 . T . . LowGQX END=157425513 GT ./. chr2 157425824 . A . . LowGQX END=157426102 GT ./. chr2 157426548 . A . . LowGQX END=157426782 GT ./. chr2 157427595 . A . . LowGQX END=157427856 GT ./. chr2 157435350 . A . . LowGQX END=157435728 GT ./. chr2 157436151 . A . . LowGQX END=157436352 GT ./. chr2 157439254 . A . . LowGQX END=157439482 GT ./. chr2 157467187 . T . . LowGQX END=157467287 GT ./. chr2 158114593 . C . . LowGQX END=158116051 GT ./. chr2 158140792 . A . . LowGQX END=158140963 GT ./. chr2 158142525 . A . . LowGQX END=158142649 GT ./. chr2 158152173 . A . . LowGQX END=158152313 GT ./. chr2 158152904 . A . . LowGQX END=158153028 GT ./. chr2 158156058 . A . . LowGQX END=158156180 GT ./. chr2 158157186 . A . . LowGQX END=158157514 GT ./. chr2 158162252 . G . . LowGQX END=158162352 GT ./. chr2 158165077 . A . . LowGQX END=158165243 GT ./. chr2 158167678 . A . . LowGQX END=158167863 GT ./. chr2 158177781 . G . . LowGQX END=158178306 GT ./. chr2 158180623 . C . . LowGQX END=158180782 GT ./. chr2 158181120 . G . . LowGQX END=158181279 GT ./. chr2 158181694 . T . . LowGQX END=158181794 GT ./. chr2 158181912 . A . . LowGQX END=158182189 GT ./. chr2 158183939 . G . . LowGQX END=158184039 GT ./. chr2 158272187 . C . . LowGQX END=158272658 GT ./. chr2 158275019 . A . . LowGQX END=158275119 GT ./. chr2 158283848 . A . . LowGQX END=158283948 GT ./. chr2 158287068 . T . . LowGQX END=158287168 GT ./. chr2 158287370 . A . . LowGQX END=158287477 GT ./. chr2 158290800 . T . . LowGQX END=158290960 GT ./. chr2 158291185 . A . . LowGQX END=158291285 GT ./. chr2 158295422 . T . . LowGQX END=158295522 GT ./. chr2 158300357 . A . . LowGQX END=158300535 GT ./. chr2 158390428 . C . . LowGQX END=158390558 GT ./. chr2 158395083 . A . . LowGQX END=158395218 GT ./. chr2 158397600 . A . . LowGQX END=158397729 GT ./. chr2 158399216 . A . . LowGQX END=158399377 GT ./. chr2 158400955 . A . . LowGQX END=158401127 GT ./. chr2 158406672 . A . . LowGQX END=158406907 GT ./. chr2 158412603 . A . . LowGQX END=158412847 GT ./. chr2 158443697 . A . . LowGQX END=158443932 GT ./. chr2 158485011 . C . . LowGQX END=158485171 GT ./. chr2 158593992 . G . . LowGQX END=158594229 GT ./. chr2 158594901 . A . . LowGQX END=158595134 GT ./. chr2 158617341 . G . . LowGQX END=158617641 GT ./. chr2 158622382 . A . . LowGQX END=158622760 GT ./. chr2 158626829 . C . . LowGQX END=158627078 GT ./. chr2 158630549 . A . . LowGQX END=158630751 GT ./. chr2 158634592 . T . . LowGQX END=158634906 GT ./. chr2 158636798 . G . . LowGQX END=158637164 GT ./. chr2 158655882 . C . . LowGQX END=158656057 GT ./. chr2 158851691 . G . . LowGQX END=158851791 GT ./. chr2 158872246 . T . . LowGQX END=158872406 GT ./. chr2 158958546 . T . . LowGQX END=158958646 GT ./. chr2 158962609 . A . . LowGQX END=158962779 GT ./. chr2 158971611 . A . . LowGQX END=158971774 GT ./. chr2 158974334 . A . . LowGQX END=158974453 GT ./. chr2 158977919 . A . . LowGQX END=158978133 GT ./. chr2 158980259 . A . . LowGQX END=158980410 GT ./. chr2 158991258 . A . . LowGQX END=158991405 GT ./. chr2 159028623 . C . . LowGQX END=159028803 GT ./. chr2 159033031 . A . . LowGQX END=159033211 GT ./. chr2 159035389 . A . . LowGQX END=159035511 GT ./. chr2 159077064 . A . . LowGQX END=159077275 GT ./. chr2 159107282 . A . . LowGQX END=159107427 GT ./. chr2 159145215 . T . . LowGQX END=159145375 GT ./. chr2 159165943 . A . . LowGQX END=159166154 GT ./. chr2 159170266 . A . . LowGQX END=159170409 GT ./. chr2 159195223 . G . . LowGQX END=159195422 GT ./. chr2 159195500 . A . . LowGQX END=159195600 GT ./. chr2 159196752 . A . . LowGQX END=159196908 GT ./. chr2 159197102 . A . . LowGQX END=159197202 GT ./. chr2 159201725 . A . . LowGQX END=159201833 GT ./. chr2 159214909 . A . . LowGQX END=159215085 GT ./. chr2 159222502 . C . . LowGQX END=159222602 GT ./. chr2 159312830 . A . . LowGQX END=159312990 GT ./. chr2 159389695 . G . . LowGQX END=159389831 GT ./. chr2 159389914 . A . . LowGQX END=159390014 GT ./. chr2 159433781 . A . . LowGQX END=159433898 GT ./. chr2 159434651 . T . . LowGQX END=159434751 GT ./. chr2 159459490 . G . . LowGQX END=159459650 GT ./. chr2 159477500 . A . . LowGQX END=159477636 GT ./. chr2 159477741 . A . . LowGQX END=159477936 GT ./. chr2 159481388 . A . . LowGQX END=159481942 GT ./. chr2 159488253 . T . . LowGQX END=159488456 GT ./. chr2 159490580 . A . . LowGQX END=159490806 GT ./. chr2 159497137 . A . . LowGQX END=159497274 GT ./. chr2 159498996 . A . . LowGQX END=159499214 GT ./. chr2 159514621 . T . . LowGQX END=159514829 GT ./. chr2 159517843 . A . . LowGQX END=159517965 GT ./. chr2 159519407 . A . . LowGQX END=159519603 GT ./. chr2 159519782 . A . . LowGQX END=159519960 GT ./. chr2 159522923 . A . . LowGQX END=159523090 GT ./. chr2 159526230 . A . . LowGQX END=159526430 GT ./. chr2 159530182 . T . . LowGQX END=159530282 GT ./. chr2 159530393 . A . . LowGQX END=159530515 GT ./. chr2 159533249 . A . . LowGQX END=159533460 GT ./. chr2 159535080 . T . . LowGQX END=159535180 GT ./. chr2 159536939 . A . . LowGQX END=159537192 GT ./. chr2 159651864 . G . . LowGQX END=159651964 GT ./. chr2 159660788 . T . . LowGQX END=159660888 GT ./. chr2 159663538 . C . . LowGQX END=159663638 GT ./. chr2 159672215 . A . . LowGQX END=159672336 GT ./. chr2 159682904 . A . . LowGQX END=159683004 GT ./. chr2 159710077 . T . . LowGQX END=159710177 GT ./. chr2 159718921 . C . . LowGQX END=159719216 GT ./. chr2 159922404 . T . . LowGQX END=159922504 GT ./. chr2 159954147 . A . . LowGQX END=159954349 GT ./. chr2 159992703 . A . . LowGQX END=159992812 GT ./. chr2 160005651 . A . . LowGQX END=160005892 GT ./. chr2 160006879 . A . . LowGQX END=160007070 GT ./. chr2 160019792 . A . . LowGQX END=160020060 GT ./. chr2 160025759 . A . . LowGQX END=160025886 GT ./. chr2 160027033 . A . . LowGQX END=160027319 GT ./. chr2 160028630 . A . . LowGQX END=160028786 GT ./. chr2 160031462 . A . . LowGQX END=160031698 GT ./. chr2 160032861 . A . . LowGQX END=160033071 GT ./. chr2 160035065 . A . . LowGQX END=160035677 GT ./. chr2 160042300 . A . . LowGQX END=160042413 GT ./. chr2 160043411 . A . . LowGQX END=160043538 GT ./. chr2 160050766 . A . . LowGQX END=160051007 GT ./. chr2 160053117 . A . . LowGQX END=160053317 GT ./. chr2 160055476 . C . . LowGQX END=160055576 GT ./. chr2 160074006 . A . . LowGQX END=160074144 GT ./. chr2 160075747 . A . . LowGQX END=160075875 GT ./. chr2 160076169 . A . . LowGQX END=160076381 GT ./. chr2 160080741 . A . . LowGQX END=160080878 GT ./. chr2 160082195 . G . . LowGQX END=160082347 GT ./. chr2 160084298 . A . . LowGQX END=160084479 GT ./. chr2 160085305 . A . . LowGQX END=160085413 GT ./. chr2 160086087 . A . . LowGQX END=160087526 GT ./. chr2 160092542 . T . . LowGQX END=160092704 GT ./. chr2 160104840 . A . . LowGQX END=160105026 GT ./. chr2 160112705 . A . . LowGQX END=160112915 GT ./. chr2 160114267 . A . . LowGQX END=160114378 GT ./. chr2 160114427 . A . . LowGQX END=160114527 GT ./. chr2 160116229 . A . . LowGQX END=160116388 GT ./. chr2 160128210 . T . . LowGQX END=160128310 GT ./. chr2 160132054 . T . . LowGQX END=160132154 GT ./. chr2 160136270 . A . . LowGQX END=160136459 GT ./. chr2 160139181 . A . . LowGQX END=160139583 GT ./. chr2 160176774 . C . . LowGQX END=160176964 GT ./. chr2 160181320 . A . . LowGQX END=160181500 GT ./. chr2 160182092 . T . . LowGQX END=160182432 GT ./. chr2 160189049 . A . . LowGQX END=160189200 GT ./. chr2 160193451 . A . . LowGQX END=160193591 GT ./. chr2 160193973 . C . . LowGQX END=160194286 GT ./. chr2 160203965 . T . . LowGQX END=160204160 GT ./. chr2 160205187 . A . . LowGQX END=160205347 GT ./. chr2 160205516 . A . . LowGQX END=160205794 GT ./. chr2 160206217 . A . . LowGQX END=160206871 GT ./. chr2 160229554 . A . . LowGQX END=160229703 GT ./. chr2 160231184 . A . . LowGQX END=160231284 GT ./. chr2 160239068 . A . . LowGQX END=160239316 GT ./. chr2 160240045 . C . . LowGQX END=160240205 GT ./. chr2 160241664 . A . . LowGQX END=160241883 GT ./. chr2 160242862 . A . . LowGQX END=160243121 GT ./. chr2 160245854 . A . . LowGQX END=160245999 GT ./. chr2 160252263 . T . . LowGQX END=160252363 GT ./. chr2 160253549 . G . . LowGQX END=160253649 GT ./. chr2 160253829 . C . . LowGQX END=160253929 GT ./. chr2 160255323 . T . . LowGQX END=160255423 GT ./. chr2 160257033 . A . . LowGQX END=160257248 GT ./. chr2 160261327 . A . . LowGQX END=160261427 GT ./. chr2 160261530 . C . . LowGQX END=160261630 GT ./. chr2 160268844 . A . . LowGQX END=160269059 GT ./. chr2 160284450 . A . . LowGQX END=160284556 GT ./. chr2 160284820 . A . . LowGQX END=160284933 GT ./. chr2 160285692 . A . . LowGQX END=160285792 GT ./. chr2 160287372 . A . . LowGQX END=160287670 GT ./. chr2 160289266 . A . . LowGQX END=160289887 GT ./. chr2 160294775 . C . . LowGQX END=160295209 GT ./. chr2 160295514 . T . . LowGQX END=160295726 GT ./. chr2 160303291 . A . . LowGQX END=160303489 GT ./. chr2 160304721 . T . . LowGQX END=160304923 GT ./. chr2 160310122 . A . . LowGQX END=160310315 GT ./. chr2 160335084 . A . . LowGQX END=160335233 GT ./. chr2 160585532 . G . . LowGQX END=160585689 GT ./. chr2 160590524 . A . . LowGQX END=160590624 GT ./. chr2 160599570 . A . . LowGQX END=160599767 GT ./. chr2 160602279 . A . . LowGQX END=160602469 GT ./. chr2 160604314 . A . . LowGQX END=160605417 GT ./. chr2 160608911 . A . . LowGQX END=160609085 GT ./. chr2 160615735 . A . . LowGQX END=160615849 GT ./. chr2 160619389 . A . . LowGQX END=160619507 GT ./. chr2 160621112 . G . . LowGQX END=160621212 GT ./. chr2 160623779 . T . . LowGQX END=160623879 GT ./. chr2 160628360 . A . . LowGQX END=160628567 GT ./. chr2 160634353 . T . . LowGQX END=160634513 GT ./. chr2 160636514 . A . . LowGQX END=160636692 GT ./. chr2 160637341 . A . . LowGQX END=160637512 GT ./. chr2 160639868 . A . . LowGQX END=160639983 GT ./. chr2 160654567 . G . . LowGQX END=160654727 GT ./. chr2 160661553 . A . . LowGQX END=160661736 GT ./. chr2 160663482 . A . . LowGQX END=160663654 GT ./. chr2 160664908 . A . . LowGQX END=160665085 GT ./. chr2 160667035 . A . . LowGQX END=160667189 GT ./. chr2 160671914 . A . . LowGQX END=160672114 GT ./. chr2 160673315 . A . . LowGQX END=160673546 GT ./. chr2 160676235 . A . . LowGQX END=160676434 GT ./. chr2 160688129 . T . . LowGQX END=160688300 GT ./. chr2 160690553 . A . . LowGQX END=160690753 GT ./. chr2 160691989 . A . . LowGQX END=160692179 GT ./. chr2 160697238 . A . . LowGQX END=160697469 GT ./. chr2 160698754 . A . . LowGQX END=160698888 GT ./. chr2 160706489 . A . . LowGQX END=160706654 GT ./. chr2 160706871 . A . . LowGQX END=160706981 GT ./. chr2 160708710 . A . . LowGQX END=160708854 GT ./. chr2 160709774 . T . . LowGQX END=160709874 GT ./. chr2 160710125 . C . . LowGQX END=160710225 GT ./. chr2 160710869 . A . . LowGQX END=160711049 GT ./. chr2 160711383 . G . . LowGQX END=160711483 GT ./. chr2 160714871 . A . . LowGQX END=160714990 GT ./. chr2 160717317 . C . . LowGQX END=160717417 GT ./. chr2 160721341 . T . . LowGQX END=160721441 GT ./. chr2 160728958 . T . . LowGQX END=160729107 GT ./. chr2 160731953 . A . . LowGQX END=160732157 GT ./. chr2 160734833 . A . . LowGQX END=160735007 GT ./. chr2 160735139 . C . . LowGQX END=160735239 GT ./. chr2 160735768 . A . . LowGQX END=160735928 GT ./. chr2 160737592 . A . . LowGQX END=160737754 GT ./. chr2 160738633 . A . . LowGQX END=160738829 GT ./. chr2 160741662 . A . . LowGQX END=160741807 GT ./. chr2 160742929 . A . . LowGQX END=160743044 GT ./. chr2 160746722 . A . . LowGQX END=160746922 GT ./. chr2 160750423 . A . . LowGQX END=160750598 GT ./. chr2 160755197 . A . . LowGQX END=160755573 GT ./. chr2 160761037 . A . . LowGQX END=160761248 GT ./. chr2 160798287 . T . . LowGQX END=160798506 GT ./. chr2 160798605 . A . . LowGQX END=160798705 GT ./. chr2 160801415 . A . . LowGQX END=160801596 GT ./. chr2 160803302 . A . . LowGQX END=160803472 GT ./. chr2 160803928 . A . . LowGQX END=160804108 GT ./. chr2 160806117 . A . . LowGQX END=160806290 GT ./. chr2 160807849 . A . . LowGQX END=160808092 GT ./. chr2 160811708 . A . . LowGQX END=160811888 GT ./. chr2 160812207 . A . . LowGQX END=160812387 GT ./. chr2 160813019 . A . . LowGQX END=160813141 GT ./. chr2 160824048 . A . . LowGQX END=160824192 GT ./. chr2 160825765 . A . . LowGQX END=160825873 GT ./. chr2 160826642 . T . . LowGQX END=160826742 GT ./. chr2 160832547 . T . . LowGQX END=160832739 GT ./. chr2 160833164 . A . . LowGQX END=160833264 GT ./. chr2 160833793 . A . . LowGQX END=160833930 GT ./. chr2 160836334 . G . . LowGQX END=160836434 GT ./. chr2 160840437 . A . . LowGQX END=160840587 GT ./. chr2 160843665 . A . . LowGQX END=160843872 GT ./. chr2 160862161 . A . . LowGQX END=160862335 GT ./. chr2 160869772 . A . . LowGQX END=160869889 GT ./. chr2 160873123 . A . . LowGQX END=160873226 GT ./. chr2 160876615 . A . . LowGQX END=160876777 GT ./. chr2 160879174 . A . . LowGQX END=160879373 GT ./. chr2 160884727 . A . . LowGQX END=160884907 GT ./. chr2 160885359 . A . . LowGQX END=160885477 GT ./. chr2 160889448 . T . . LowGQX END=160889646 GT ./. chr2 160898534 . A . . LowGQX END=160898712 GT ./. chr2 160901283 . A . . LowGQX END=160901671 GT ./. chr2 160918804 . A . . LowGQX END=160918963 GT ./. chr2 160958195 . G . . LowGQX END=160958348 GT ./. chr2 160964188 . A . . LowGQX END=160964359 GT ./. chr2 160968589 . A . . LowGQX END=160968759 GT ./. chr2 160980300 . A . . LowGQX END=160980402 GT ./. chr2 160982888 . A . . LowGQX END=160983115 GT ./. chr2 160993943 . A . . LowGQX END=160994365 GT ./. chr2 160994574 . A . . LowGQX END=160994713 GT ./. chr2 160998431 . C . . LowGQX END=160998588 GT ./. chr2 161025721 . A . . LowGQX END=161025821 GT ./. chr2 161029078 . A . . LowGQX END=161029244 GT ./. chr2 161030453 . A . . LowGQX END=161030653 GT ./. chr2 161051878 . A . . LowGQX END=161052129 GT ./. chr2 161052725 . A . . LowGQX END=161052934 GT ./. chr2 161055680 . T . . LowGQX END=161055780 GT ./. chr2 161056495 . C . . LowGQX END=161056595 GT ./. chr2 161132137 . A . . LowGQX END=161132237 GT ./. chr2 161133805 . T . . LowGQX END=161133905 GT ./. chr2 161135005 . A . . LowGQX END=161135172 GT ./. chr2 161137801 . A . . LowGQX END=161137901 GT ./. chr2 161138742 . T . . LowGQX END=161138842 GT ./. chr2 161141184 . T . . LowGQX END=161141382 GT ./. chr2 161141481 . T . . LowGQX END=161141581 GT ./. chr2 161143478 . A . . LowGQX END=161143598 GT ./. chr2 161157152 . A . . LowGQX END=161157252 GT ./. chr2 161159839 . A . . LowGQX END=161160001 GT ./. chr2 161169663 . T . . LowGQX END=161169763 GT ./. chr2 161174650 . T . . LowGQX END=161174808 GT ./. chr2 161223725 . A . . LowGQX END=161223905 GT ./. chr2 161349788 . G . . LowGQX END=161349888 GT ./. chr2 161797464 . G . . LowGQX END=161797564 GT ./. chr2 162017270 . A . . LowGQX END=162017370 GT ./. chr2 162017798 . G . . LowGQX END=162017924 GT ./. chr2 162036124 . G . . LowGQX END=162036275 GT ./. chr2 162059329 . C . . LowGQX END=162059429 GT ./. chr2 162059994 . G . . LowGQX END=162060109 GT ./. chr2 162061154 . C . . LowGQX END=162061374 GT ./. chr2 162072874 . C . . LowGQX END=162072974 GT ./. chr2 162076214 . T . . LowGQX END=162076314 GT ./. chr2 162080415 . G . . LowGQX END=162080515 GT ./. chr2 162081140 . A . . LowGQX END=162081260 GT ./. chr2 162087469 . C . . LowGQX END=162088065 GT ./. chr2 162089243 . G . . LowGQX END=162089357 GT ./. chr2 162091851 . A . . LowGQX END=162092032 GT ./. chr2 162175256 . A . . LowGQX END=162175411 GT ./. chr2 162223975 . G . . LowGQX END=162224075 GT ./. chr2 162224294 . G . . LowGQX END=162224415 GT ./. chr2 162226603 . T . . LowGQX END=162226703 GT ./. chr2 162227682 . G . . LowGQX END=162227834 GT ./. chr2 162241974 . G . . LowGQX END=162242083 GT ./. chr2 162247544 . C . . LowGQX END=162247702 GT ./. chr2 162251588 . G . . LowGQX END=162251758 GT ./. chr2 162265329 . C . . LowGQX END=162265429 GT ./. chr2 162267812 . G . . LowGQX END=162267912 GT ./. chr2 162272920 . C . . LowGQX END=162273616 GT ./. chr2 162274185 . A . . LowGQX END=162274344 GT ./. chr2 162274710 . A . . LowGQX END=162274836 GT ./. chr2 162275401 . A . . LowGQX END=162275591 GT ./. chr2 162276688 . C . . LowGQX END=162276788 GT ./. chr2 162279878 . A . . LowGQX END=162280741 GT ./. chr2 162481003 . T . . LowGQX END=162481103 GT ./. chr2 162565249 . A . . LowGQX END=162565349 GT ./. chr2 162567170 . G . . LowGQX END=162567270 GT ./. chr2 162627474 . A . . LowGQX END=162627574 GT ./. chr2 162660958 . G . . LowGQX END=162661106 GT ./. chr2 162696298 . G . . LowGQX END=162696438 GT ./. chr2 162711479 . G . . LowGQX END=162711641 GT ./. chr2 162719383 . G . . LowGQX END=162719573 GT ./. chr2 162728799 . T . . LowGQX END=162728899 GT ./. chr2 162730421 . T . . LowGQX END=162730521 GT ./. chr2 162735640 . G . . LowGQX END=162735799 GT ./. chr2 162738861 . T . . LowGQX END=162738961 GT ./. chr2 162751188 . G . . LowGQX END=162751336 GT ./. chr2 162757420 . G . . LowGQX END=162757607 GT ./. chr2 162758516 . A . . LowGQX END=162758616 GT ./. chr2 162760513 . G . . LowGQX END=162760689 GT ./. chr2 162761285 . G . . LowGQX END=162761420 GT ./. chr2 162762151 . G . . LowGQX END=162762398 GT ./. chr2 162799301 . G . . LowGQX END=162799408 GT ./. chr2 162804075 . G . . LowGQX END=162804238 GT ./. chr2 162805657 . G . . LowGQX END=162805817 GT ./. chr2 162807156 . T . . LowGQX END=162807359 GT ./. chr2 162813498 . G . . LowGQX END=162813751 GT ./. chr2 162814926 . T . . LowGQX END=162815081 GT ./. chr2 162820644 . G . . LowGQX END=162820844 GT ./. chr2 162821560 . G . . LowGQX END=162821684 GT ./. chr2 162830743 . A . . LowGQX END=162830843 GT ./. chr2 162833269 . G . . LowGQX END=162833387 GT ./. chr2 162833768 . T . . LowGQX END=162833868 GT ./. chr2 162834188 . T . . LowGQX END=162834288 GT ./. chr2 162839672 . T . . LowGQX END=162839772 GT ./. chr2 162849791 . T . . LowGQX END=162849897 GT ./. chr2 162851458 . A . . LowGQX END=162851558 GT ./. chr2 162851797 . A . . LowGQX END=162851897 GT ./. chr2 162862238 . A . . LowGQX END=162862338 GT ./. chr2 162865070 . A . . LowGQX END=162865174 GT ./. chr2 162865729 . G . . LowGQX END=162865829 GT ./. chr2 162868301 . A . . LowGQX END=162868500 GT ./. chr2 162870834 . T . . LowGQX END=162870991 GT ./. chr2 162873276 . A . . LowGQX END=162873379 GT ./. chr2 162873592 . A . . LowGQX END=162873692 GT ./. chr2 162875237 . A . . LowGQX END=162875363 GT ./. chr2 162875641 . A . . LowGQX END=162875810 GT ./. chr2 162876723 . T . . LowGQX END=162876823 GT ./. chr2 162877089 . A . . LowGQX END=162877201 GT ./. chr2 162879238 . T . . LowGQX END=162879338 GT ./. chr2 162881312 . A . . LowGQX END=162881452 GT ./. chr2 162890049 . A . . LowGQX END=162890166 GT ./. chr2 162891672 . A . . LowGQX END=162891837 GT ./. chr2 162894810 . A . . LowGQX END=162894980 GT ./. chr2 162895445 . A . . LowGQX END=162895545 GT ./. chr2 162895619 . G . . LowGQX END=162895719 GT ./. chr2 162901980 . G . . LowGQX END=162902133 GT ./. chr2 162903232 . G . . LowGQX END=162903332 GT ./. chr2 162903421 . A . . LowGQX END=162903521 GT ./. chr2 162903911 . A . . LowGQX END=162904014 GT ./. chr2 162929903 . A . . LowGQX END=162930003 GT ./. chr2 162930439 . G . . LowGQX END=162930539 GT ./. chr2 162999827 . G . . LowGQX END=162999927 GT ./. chr2 163000368 . C . . LowGQX END=163000468 GT ./. chr2 163000536 . C . . LowGQX END=163000681 GT ./. chr2 163002049 . C . . LowGQX END=163002188 GT ./. chr2 163003862 . C . . LowGQX END=163004025 GT ./. chr2 163004058 . T . . LowGQX END=163004158 GT ./. chr2 163005593 . A . . LowGQX END=163005693 GT ./. chr2 163027487 . T . . LowGQX END=163027593 GT ./. chr2 163029308 . C . . LowGQX END=163029408 GT ./. chr2 163029643 . C . . LowGQX END=163029743 GT ./. chr2 163030216 . A . . LowGQX END=163030316 GT ./. chr2 163031375 . A . . LowGQX END=163031479 GT ./. chr2 163039842 . T . . LowGQX END=163040002 GT ./. chr2 163044677 . A . . LowGQX END=163044876 GT ./. chr2 163045598 . G . . LowGQX END=163045698 GT ./. chr2 163046114 . G . . LowGQX END=163046267 GT ./. chr2 163051185 . G . . LowGQX END=163051285 GT ./. chr2 163054055 . T . . LowGQX END=163054155 GT ./. chr2 163054697 . C . . LowGQX END=163054857 GT ./. chr2 163055265 . A . . LowGQX END=163055394 GT ./. chr2 163056993 . T . . LowGQX END=163057204 GT ./. chr2 163059368 . C . . LowGQX END=163059468 GT ./. chr2 163059549 . A . . LowGQX END=163059658 GT ./. chr2 163066433 . A . . LowGQX END=163066533 GT ./. chr2 163070446 . A . . LowGQX END=163070586 GT ./. chr2 163072406 . A . . LowGQX END=163072514 GT ./. chr2 163074494 . A . . LowGQX END=163074653 GT ./. chr2 163075571 . A . . LowGQX END=163075741 GT ./. chr2 163076291 . T . . LowGQX END=163076450 GT ./. chr2 163078167 . G . . LowGQX END=163078267 GT ./. chr2 163080095 . A . . LowGQX END=163080195 GT ./. chr2 163080904 . T . . LowGQX END=163081064 GT ./. chr2 163081931 . T . . LowGQX END=163082091 GT ./. chr2 163083031 . A . . LowGQX END=163083191 GT ./. chr2 163099411 . T . . LowGQX END=163099511 GT ./. chr2 163099785 . C . . LowGQX END=163099885 GT ./. chr2 163123708 . T . . LowGQX END=163123908 GT ./. chr2 163123927 . G . . LowGQX END=163124085 GT ./. chr2 163124595 . A . . LowGQX END=163124790 GT ./. chr2 163128704 . T . . LowGQX END=163128900 GT ./. chr2 163130303 . A . . LowGQX END=163130457 GT ./. chr2 163133195 . A . . LowGQX END=163133459 GT ./. chr2 163133923 . A . . LowGQX END=163134206 GT ./. chr2 163134663 . A . . LowGQX END=163134841 GT ./. chr2 163136454 . T . . LowGQX END=163136625 GT ./. chr2 163137836 . A . . LowGQX END=163138058 GT ./. chr2 163138874 . A . . LowGQX END=163139089 GT ./. chr2 163144643 . A . . LowGQX END=163144868 GT ./. chr2 163150072 . A . . LowGQX END=163150181 GT ./. chr2 163163217 . A . . LowGQX END=163163368 GT ./. chr2 163167230 . A . . LowGQX END=163167446 GT ./. chr2 163174363 . A . . LowGQX END=163174820 GT ./. chr2 163175645 . A . . LowGQX END=163175653;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:3:28 chr2 163175654 . A T 14.92 LowGQX;LowGQ DP=4;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;MQ=28;MQ0=2;QD=3.73;SB=-37.80 GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,4:4:3.01:45,3,0:28:3:1.000 chr2 163175655 . G . . LowGQX . GT:DP:GQX:MQ 0/0:2:3:40 chr2 163175656 . A . . LowGQX END=163175750 GT ./. chr2 163200723 . T . . LowGQX END=163200823 GT ./. chr2 163204086 . A . . LowGQX END=163204276 GT ./. chr2 163208833 . A . . LowGQX END=163208933 GT ./. chr2 163212920 . T . . LowGQX END=163213020 GT ./. chr2 163213266 . A . . LowGQX END=163213418 GT ./. chr2 163215552 . A . . LowGQX END=163215712 GT ./. chr2 163215984 . A . . LowGQX END=163216084 GT ./. chr2 163216635 . T . . LowGQX END=163216791 GT ./. chr2 163217213 . T . . LowGQX END=163217313 GT ./. chr2 163227802 . A . . LowGQX END=163227902 GT ./. chr2 163228337 . G . . LowGQX END=163228608 GT ./. chr2 163229978 . A . . LowGQX END=163230175 GT ./. chr2 163236361 . A . . LowGQX END=163236534 GT ./. chr2 163241196 . A . . LowGQX END=163241452 GT ./. chr2 163250847 . A . . LowGQX END=163250998 GT ./. chr2 163253248 . A . . LowGQX END=163253458 GT ./. chr2 163256697 . A . . LowGQX END=163256954 GT ./. chr2 163279778 . T . . LowGQX END=163280048 GT ./. chr2 163291706 . A . . LowGQX END=163292110 GT ./. chr2 163302526 . A . . LowGQX END=163302956 GT ./. chr2 163360951 . A . . LowGQX END=163361170 GT ./. chr2 163369125 . G . . LowGQX END=163369225 GT ./. chr2 163374238 . A . . LowGQX END=163374671 GT ./. chr2 163393433 . A . . LowGQX END=163393593 GT ./. chr2 163693045 . A . . LowGQX END=163693280 GT ./. chr2 163694941 . A . . LowGQX END=163695041 GT ./. chr2 164450224 . A . . LowGQX END=164450324 GT ./. chr2 164466060 . T . . LowGQX END=164468319 GT ./. chr2 164591376 . T . . LowGQX END=164591476 GT ./. chr2 165349544 . G . . LowGQX END=165349695 GT ./. chr2 165350938 . T . . LowGQX END=165351089 GT ./. chr2 165353512 . A . . LowGQX END=165353612 GT ./. chr2 165353708 . T . . LowGQX END=165353808 GT ./. chr2 165353882 . A . . LowGQX END=165354003 GT ./. chr2 165358756 . G . . LowGQX END=165358856 GT ./. chr2 165364963 . A . . LowGQX END=165365063 GT ./. chr2 165365250 . A . . LowGQX END=165365365 GT ./. chr2 165378448 . T . . LowGQX END=165378630 GT ./. chr2 165381442 . G . . LowGQX END=165381662 GT ./. chr2 165383522 . A . . LowGQX END=165383692 GT ./. chr2 165404168 . A . . LowGQX END=165404329 GT ./. chr2 165424806 . G . . LowGQX END=165424906 GT ./. chr2 165476195 . A . . LowGQX END=165476385 GT ./. chr2 165477616 . C . . LowGQX END=165477822 GT ./. chr2 165542450 . T . . LowGQX END=165542550 GT ./. chr2 165548729 . A . . LowGQX END=165548910 GT ./. chr2 165550777 . A . . LowGQX END=165552347 GT ./. chr2 165555913 . A . . LowGQX END=165556013 GT ./. chr2 165557030 . A . . LowGQX END=165557269 GT ./. chr2 165559612 . A . . LowGQX END=165559733 GT ./. chr2 165560068 . T . . LowGQX END=165560228 GT ./. chr2 165560942 . A . . LowGQX END=165561042 GT ./. chr2 165561420 . A . . LowGQX END=165561618 GT ./. chr2 165578583 . A . . LowGQX END=165578824 GT ./. chr2 165578933 . A . . LowGQX END=165579093 GT ./. chr2 165583585 . T . . LowGQX END=165583685 GT ./. chr2 165584477 . A . . LowGQX END=165584710 GT ./. chr2 165586422 . A . . LowGQX END=165586628 GT ./. chr2 165600106 . T . . LowGQX END=165600388 GT ./. chr2 165630191 . A . . LowGQX END=165630291 GT ./. chr2 165636165 . C . . LowGQX END=165636272 GT ./. chr2 165657004 . A . . LowGQX END=165657104 GT ./. chr2 165693919 . C . . LowGQX END=165694019 GT ./. chr2 165697661 . C . . LowGQX END=165697813 GT ./. chr2 165698401 . C . . LowGQX END=165698561 GT ./. chr2 165754945 . A . . LowGQX END=165755243 GT ./. chr2 165765148 . A . . LowGQX END=165765284 GT ./. chr2 165768144 . A . . LowGQX END=165768261 GT ./. chr2 165771620 . A . . LowGQX END=165771786 GT ./. chr2 165772399 . A . . LowGQX END=165772499 GT ./. chr2 165793850 . C . . LowGQX END=165793950 GT ./. chr2 165795958 . A . . LowGQX END=165796069 GT ./. chr2 165801062 . T . . LowGQX END=165801162 GT ./. chr2 165802101 . A . . LowGQX END=165802281 GT ./. chr2 165809138 . A . . LowGQX END=165809355 GT ./. chr2 165811140 . C . . LowGQX END=165811256 GT ./. chr2 165811688 . G . . LowGQX END=165811788 GT ./. chr2 165946609 . A . . LowGQX END=165947897 GT ./. chr2 165948713 . G . . LowGQX END=165949086 GT ./. chr2 165950833 . A . . LowGQX END=165951040 GT ./. chr2 165951970 . T . . LowGQX END=165952210 GT ./. chr2 165952926 . A . . LowGQX END=165953082 GT ./. chr2 165953709 . C . . LowGQX END=165954086 GT ./. chr2 165956761 . T . . LowGQX END=165956986 GT ./. chr2 165969344 . A . . LowGQX END=165969620 GT ./. chr2 165970275 . A . . LowGQX END=165970532 GT ./. chr2 165971914 . T . . LowGQX END=165972137 GT ./. chr2 165984090 . A . . LowGQX END=165984663 GT ./. chr2 165986399 . G . . LowGQX END=165986858 GT ./. chr2 165987703 . T . . LowGQX END=165987979 GT ./. chr2 165994338 . T . . LowGQX END=165994679 GT ./. chr2 165995935 . C . . LowGQX END=165996170 GT ./. chr2 165997110 . T . . LowGQX END=165997560 GT ./. chr2 166003198 . A . . LowGQX END=166003591 GT ./. chr2 166010911 . C . . LowGQX END=166011220 GT ./. chr2 166012221 . T . . LowGQX END=166012465 GT ./. chr2 166018767 . T . . LowGQX END=166018933 GT ./. chr2 166019015 . T . . LowGQX END=166019390 GT ./. chr2 166020077 . A . . LowGQX END=166020271 GT ./. chr2 166020311 . C . . LowGQX END=166020428 GT ./. chr2 166020851 . C . . LowGQX END=166021082 GT ./. chr2 166025195 . C . . LowGQX END=166025387 GT ./. chr2 166026889 . T . . LowGQX END=166027110 GT ./. chr2 166032590 . C . . LowGQX END=166032956 GT ./. chr2 166152283 . C . . LowGQX END=166152652 GT ./. chr2 166153476 . T . . LowGQX END=166153697 GT ./. chr2 166164307 . A . . LowGQX END=166164499 GT ./. chr2 166165125 . T . . LowGQX END=166165356 GT ./. chr2 166165624 . G . . LowGQX END=166166005 GT ./. chr2 166166782 . A . . LowGQX END=166167157 GT ./. chr2 166168484 . A . . LowGQX END=166168650 GT ./. chr2 166170079 . T . . LowGQX END=166170323 GT ./. chr2 166170361 . G . . LowGQX END=166170670 GT ./. chr2 166171930 . A . . LowGQX END=166172320 GT ./. chr2 166179615 . A . . LowGQX END=166180062 GT ./. chr2 166183311 . C . . LowGQX END=166183546 GT ./. chr2 166187789 . T . . LowGQX END=166188130 GT ./. chr2 166198755 . T . . LowGQX END=166199031 GT ./. chr2 166201014 . G . . LowGQX END=166201473 GT ./. chr2 166210651 . A . . LowGQX END=166211233 GT ./. chr2 166221602 . T . . LowGQX END=166221825 GT ./. chr2 166223676 . A . . LowGQX END=166223933 GT ./. chr2 166226585 . A . . LowGQX END=166226861 GT ./. chr2 166229684 . G . . LowGQX END=166229909 GT ./. chr2 166231144 . A . . LowGQX END=166231528 GT ./. chr2 166234056 . T . . LowGQX END=166234212 GT ./. chr2 166237051 . T . . LowGQX END=166237291 GT ./. chr2 166237552 . T . . LowGQX END=166237759 GT ./. chr2 166243205 . T . . LowGQX END=166243578 GT ./. chr2 166245088 . T . . LowGQX END=166246386 GT ./. chr2 166430855 . T . . LowGQX END=166430955 GT ./. chr2 166451552 . G . . LowGQX END=166451726 GT ./. chr2 166514269 . A . . LowGQX END=166514533 GT ./. chr2 166532820 . A . . LowGQX END=166533121 GT ./. chr2 166535209 . A . . LowGQX END=166536266 GT ./. chr2 166605240 . C . . LowGQX END=166605465 GT ./. chr2 166606201 . A . . LowGQX END=166606456 GT ./. chr2 166611086 . C . . LowGQX END=166611290 GT ./. chr2 166611391 . G . . LowGQX END=166611615 GT ./. chr2 166613506 . G . . LowGQX END=166613809 GT ./. chr2 166615206 . A . . LowGQX END=166615426 GT ./. chr2 166615795 . C . . LowGQX END=166616132 GT ./. chr2 166618233 . T . . LowGQX END=166618616 GT ./. chr2 166621343 . A . . LowGQX END=166621618 GT ./. chr2 166626614 . A . . LowGQX END=166627262 GT ./. chr2 166731214 . G . . LowGQX END=166731394 GT ./. chr2 166732624 . A . . LowGQX END=166732794 GT ./. chr2 166737138 . T . . LowGQX END=166737361 GT ./. chr2 166740253 . A . . LowGQX END=166740580 GT ./. chr2 166744738 . A . . LowGQX END=166745036 GT ./. chr2 166746938 . T . . LowGQX END=166747202 GT ./. chr2 166747297 . T . . LowGQX END=166747550 GT ./. chr2 166755145 . G . . LowGQX END=166755329 GT ./. chr2 166756229 . A . . LowGQX END=166756442 GT ./. chr2 166758181 . T . . LowGQX END=166758472 GT ./. chr2 166764137 . T . . LowGQX END=166764346 GT ./. chr2 166767786 . A . . LowGQX END=166768027 GT ./. chr2 166768973 . G . . LowGQX END=166769186 GT ./. chr2 166770043 . A . . LowGQX END=166770208 GT ./. chr2 166771660 . A . . LowGQX END=166772001 GT ./. chr2 166773716 . G . . LowGQX END=166774043 GT ./. chr2 166775735 . A . . LowGQX END=166775995 GT ./. chr2 166781008 . T . . LowGQX END=166781240 GT ./. chr2 166785564 . A . . LowGQX END=166785897 GT ./. chr2 166786109 . A . . LowGQX END=166786309 GT ./. chr2 166786631 . A . . LowGQX END=166786926 GT ./. chr2 166788217 . A . . LowGQX END=166788418 GT ./. chr2 166789432 . A . . LowGQX END=166789619 GT ./. chr2 166797486 . C . . LowGQX END=166797746 GT ./. chr2 166799678 . T . . LowGQX END=166799903 GT ./. chr2 166801983 . T . . LowGQX END=166802252 GT ./. chr2 166805853 . A . . LowGQX END=166806286 GT ./. chr2 166810105 . C . . LowGQX END=166810265 GT ./. chr2 166847704 . C . . LowGQX END=166848984 GT ./. chr2 166850605 . T . . LowGQX END=166850978 GT ./. chr2 166852472 . T . . LowGQX END=166852679 GT ./. chr2 166854497 . C . . LowGQX END=166854737 GT ./. chr2 166856182 . T . . LowGQX END=166856338 GT ./. chr2 166858931 . T . . LowGQX END=166859315 GT ./. chr2 166866178 . T . . LowGQX END=166866403 GT ./. chr2 166868568 . T . . LowGQX END=166868844 GT ./. chr2 166870203 . T . . LowGQX END=166870460 GT ./. chr2 166872066 . A . . LowGQX END=166872289 GT ./. chr2 166892507 . T . . LowGQX END=166893092 GT ./. chr2 166894235 . A . . LowGQX END=166894694 GT ./. chr2 166895882 . C . . LowGQX END=166896158 GT ./. chr2 166897690 . T . . LowGQX END=166898021 GT ./. chr2 166898751 . A . . LowGQX END=166898986 GT ./. chr2 166900178 . C . . LowGQX END=166900611 GT ./. chr2 166901502 . T . . LowGQX END=166901889 GT ./. chr2 166903229 . G . . LowGQX END=166903538 GT ./. chr2 166904086 . T . . LowGQX END=166904330 GT ./. chr2 166905345 . A . . LowGQX END=166905511 GT ./. chr2 166908178 . A . . LowGQX END=166908550 GT ./. chr2 166909311 . G . . LowGQX END=166909505 GT ./. chr2 166911097 . G . . LowGQX END=166911328 GT ./. chr2 166912870 . T . . LowGQX END=166913061 GT ./. chr2 166915077 . T . . LowGQX END=166915250 GT ./. chr2 166929817 . G . . LowGQX END=166930183 GT ./. chr2 167055181 . T . . LowGQX END=167056375 GT ./. chr2 167060464 . C . . LowGQX END=167060736 GT ./. chr2 167060852 . A . . LowGQX END=167060975 GT ./. chr2 167083076 . T . . LowGQX END=167083236 GT ./. chr2 167084147 . A . . LowGQX END=167084299 GT ./. chr2 167085200 . C . . LowGQX END=167085483 GT ./. chr2 167089849 . C . . LowGQX END=167090009 GT ./. chr2 167094603 . C . . LowGQX END=167094778 GT ./. chr2 167099011 . C . . LowGQX END=167099167 GT ./. chr2 167108274 . C . . LowGQX END=167108396 GT ./. chr2 167128908 . C . . LowGQX END=167129386 GT ./. chr2 167133492 . C . . LowGQX END=167133850 GT ./. chr2 167134649 . C . . LowGQX END=167134824 GT ./. chr2 167136866 . C . . LowGQX END=167137106 GT ./. chr2 167138188 . C . . LowGQX END=167138319 GT ./. chr2 167140929 . C . . LowGQX END=167141335 GT ./. chr2 167142845 . C . . LowGQX END=167143134 GT ./. chr2 167144946 . C . . LowGQX END=167145154 GT ./. chr2 167149730 . T . . LowGQX END=167149883 GT ./. chr2 167151071 . T . . LowGQX END=167151173 GT ./. chr2 167159589 . G . . LowGQX END=167159819 GT ./. chr2 167160537 . T . . LowGQX END=167160637 GT ./. chr2 167160734 . C . . LowGQX END=167160840 GT ./. chr2 167162261 . T . . LowGQX END=167162431 GT ./. chr2 167162995 . T . . LowGQX END=167163162 GT ./. chr2 167163465 . T . . LowGQX END=167163585 GT ./. chr2 167168008 . C . . LowGQX END=167168267 GT ./. chr2 167262089 . A . . LowGQX END=167263157 GT ./. chr2 167266174 . C . . LowGQX END=167266446 GT ./. chr2 167266729 . C . . LowGQX END=167266835 GT ./. chr2 167269039 . T . . LowGQX END=167269219 GT ./. chr2 167269497 . A . . LowGQX END=167269655 GT ./. chr2 167273216 . C . . LowGQX END=167273496 GT ./. chr2 167277649 . T . . LowGQX END=167277808 GT ./. chr2 167279738 . A . . LowGQX END=167279943 GT ./. chr2 167284297 . C . . LowGQX END=167284453 GT ./. chr2 167285678 . C . . LowGQX END=167285838 GT ./. chr2 167288827 . C . . LowGQX END=167289263 GT ./. chr2 167292854 . C . . LowGQX END=167292954 GT ./. chr2 167297905 . C . . LowGQX END=167298263 GT ./. chr2 167299992 . T . . LowGQX END=167300187 GT ./. chr2 167301271 . C . . LowGQX END=167301511 GT ./. chr2 167304120 . A . . LowGQX END=167304271 GT ./. chr2 167313379 . C . . LowGQX END=167313587 GT ./. chr2 167318898 . C . . LowGQX END=167319041 GT ./. chr2 167321957 . A . . LowGQX END=167322057 GT ./. chr2 167322290 . C . . LowGQX END=167322498 GT ./. chr2 167327121 . T . . LowGQX END=167327221 GT ./. chr2 167328826 . C . . LowGQX END=167328956 GT ./. chr2 167330304 . C . . LowGQX END=167330452 GT ./. chr2 167330735 . T . . LowGQX END=167330855 GT ./. chr2 167333972 . C . . LowGQX END=167334207 GT ./. chr2 167759991 . C . . LowGQX END=167760403 GT ./. chr2 167992417 . A . . LowGQX END=167992575 GT ./. chr2 168041051 . G . . LowGQX END=168041151 GT ./. chr2 168067243 . A . . LowGQX END=168067408 GT ./. chr2 168074674 . A . . LowGQX END=168074813 GT ./. chr2 168096303 . A . . LowGQX END=168096478 GT ./. chr2 168097161 . T . . LowGQX END=168097261 GT ./. chr2 168098285 . A . . LowGQX END=168098423 GT ./. chr2 168099077 . A . . LowGQX END=168108466 GT ./. chr2 168110540 . A . . LowGQX END=168110678 GT ./. chr2 168114365 . A . . LowGQX END=168115876 GT ./. chr2 168725548 . C . . LowGQX END=168726533 GT ./. chr2 168811994 . A . . LowGQX END=168812094 GT ./. chr2 168821100 . A . . LowGQX END=168821255 GT ./. chr2 168869129 . T . . LowGQX END=168869229 GT ./. chr2 168873530 . T . . LowGQX END=168873630 GT ./. chr2 168919996 . A . . LowGQX END=168920096 GT ./. chr2 168921811 . A . . LowGQX END=168921911 GT ./. chr2 168931457 . A . . LowGQX END=168931557 GT ./. chr2 168931617 . A . . LowGQX END=168931744 GT ./. chr2 168986034 . A . . LowGQX END=168986134 GT ./. chr2 168986195 . T . . LowGQX END=168986295 GT ./. chr2 168994596 . A . . LowGQX END=168994734 GT ./. chr2 168996797 . A . . LowGQX END=168996903 GT ./. chr2 168997157 . A . . LowGQX END=168997271 GT ./. chr2 169018275 . T . . LowGQX END=169018375 GT ./. chr2 169020207 . G . . LowGQX END=169020393 GT ./. chr2 169023807 . A . . LowGQX END=169023920 GT ./. chr2 169038486 . A . . LowGQX END=169038603 GT ./. chr2 169103665 . A . . LowGQX END=169104015 GT ./. chr2 169312957 . A . . LowGQX END=169313131 GT ./. chr2 169404104 . A . . LowGQX END=169404214 GT ./. chr2 169417700 . A . . LowGQX END=169417835 GT ./. chr2 169487474 . T . . LowGQX END=169487574 GT ./. chr2 169547520 . A . . LowGQX END=169547620 GT ./. chr2 169551466 . C . . LowGQX END=169551617 GT ./. chr2 169571509 . A . . LowGQX END=169571642 GT ./. chr2 169574380 . A . . LowGQX END=169574491 GT ./. chr2 169622100 . A . . LowGQX END=169622261 GT ./. chr2 169622794 . C . . LowGQX END=169622894 GT ./. chr2 169626018 . A . . LowGQX END=169626228 GT ./. chr2 169659121 . C . . LowGQX END=169659221 GT ./. chr2 169668070 . T . . LowGQX END=169668170 GT ./. chr2 169674682 . A . . LowGQX END=169674807 GT ./. chr2 169681136 . T . . LowGQX END=169681236 GT ./. chr2 169684650 . A . . LowGQX END=169684750 GT ./. chr2 169684921 . T . . LowGQX END=169685021 GT ./. chr2 169687964 . T . . LowGQX END=169688064 GT ./. chr2 169690735 . A . . LowGQX END=169690838 GT ./. chr2 169699500 . A . . LowGQX END=169699630 GT ./. chr2 169707345 . G . . LowGQX END=169707517 GT ./. chr2 169707592 . A . . LowGQX END=169707695 GT ./. chr2 169707787 . A . . LowGQX END=169707917 GT ./. chr2 169711860 . A . . LowGQX END=169711973 GT ./. chr2 169712356 . A . . LowGQX END=169712456 GT ./. chr2 169713184 . A . . LowGQX END=169713291 GT ./. chr2 169716020 . A . . LowGQX END=169716150 GT ./. chr2 169717303 . A . . LowGQX END=169717422 GT ./. chr2 169718465 . T . . LowGQX END=169718565 GT ./. chr2 169721342 . A . . LowGQX END=169721483 GT ./. chr2 169727939 . T . . LowGQX END=169728068 GT ./. chr2 169730093 . A . . LowGQX END=169730196 GT ./. chr2 169732580 . A . . LowGQX END=169732740 GT ./. chr2 169733746 . A . . LowGQX END=169733946 GT ./. chr2 169745719 . T . . LowGQX END=169745819 GT ./. chr2 169745895 . A . . LowGQX END=169746032 GT ./. chr2 169757791 . A . . LowGQX END=169758111 GT ./. chr2 169758904 . A . . LowGQX END=169759116 GT ./. chr2 169760964 . G . . LowGQX END=169761178 GT ./. chr2 169763123 . A . . LowGQX END=169763341 GT ./. chr2 169764027 . G . . LowGQX END=169764641 GT ./. chr2 169780131 . G . . LowGQX END=169780333 GT ./. chr2 169781166 . C . . LowGQX END=169781314 GT ./. chr2 169783665 . C . . LowGQX END=169783873 GT ./. chr2 169787174 . C . . LowGQX END=169787373 GT ./. chr2 169788886 . C . . LowGQX END=169789044 GT ./. chr2 169791693 . C . . LowGQX END=169791936 GT ./. chr2 169792739 . C . . LowGQX END=169792944 GT ./. chr2 169801114 . C . . LowGQX END=169801277 GT ./. chr2 169801366 . C . . LowGQX END=169801479 GT ./. chr2 169814473 . C . . LowGQX END=169814639 GT ./. chr2 169820707 . G . . LowGQX END=169820819 GT ./. chr2 169824879 . C . . LowGQX END=169825001 GT ./. chr2 169825859 . C . . LowGQX END=169826062 GT ./. chr2 169826554 . C . . LowGQX END=169826726 GT ./. chr2 169826802 . T . . LowGQX END=169826902 GT ./. chr2 169828356 . C . . LowGQX END=169828561 GT ./. chr2 169830224 . C . . LowGQX END=169830351 GT ./. chr2 169833086 . C . . LowGQX END=169833212 GT ./. chr2 169836375 . C . . LowGQX END=169836503 GT ./. chr2 169842619 . C . . LowGQX END=169842795 GT ./. chr2 169847310 . C . . LowGQX END=169847436 GT ./. chr2 169850220 . C . . LowGQX END=169850393 GT ./. chr2 169851848 . C . . LowGQX END=169852008 GT ./. chr2 169853139 . A . . LowGQX END=169853239 GT ./. chr2 169869781 . C . . LowGQX END=169870021 GT ./. chr2 169870769 . T . . LowGQX END=169870869 GT ./. chr2 169873209 . T . . LowGQX END=169873369 GT ./. chr2 169874418 . G . . LowGQX END=169874518 GT ./. chr2 169874559 . C . . LowGQX END=169874668 GT ./. chr2 169923656 . T . . LowGQX END=169923778 GT ./. chr2 169938032 . G . . LowGQX END=169938407 GT ./. chr2 169939837 . A . . LowGQX END=169940100 GT ./. chr2 169948298 . A . . LowGQX END=169948466 GT ./. chr2 169952052 . A . . LowGQX END=169952280 GT ./. chr2 169985122 . A . . LowGQX END=169985392 GT ./. chr2 169985472 . A . . LowGQX END=169985646 GT ./. chr2 169989033 . T . . LowGQX END=169989243 GT ./. chr2 169993851 . T . . LowGQX END=169994055 GT ./. chr2 169995036 . T . . LowGQX END=169995268 GT ./. chr2 169995700 . A . . LowGQX END=169995933 GT ./. chr2 169996002 . A . . LowGQX END=169996172 GT ./. chr2 169996914 . T . . LowGQX END=169997107 GT ./. chr2 169999133 . C . . LowGQX END=169999355 GT ./. chr2 170002206 . A . . LowGQX END=170002485 GT ./. chr2 170003198 . G . . LowGQX END=170003521 GT ./. chr2 170007357 . G . . LowGQX END=170007588 GT ./. chr2 170009258 . C . . LowGQX END=170009526 GT ./. chr2 170010919 . A . . LowGQX END=170011165 GT ./. chr2 170012733 . C . . LowGQX END=170012967 GT ./. chr2 170013830 . A . . LowGQX END=170014064 GT ./. chr2 170018931 . T . . LowGQX END=170019162 GT ./. chr2 170022391 . A . . LowGQX END=170022616 GT ./. chr2 170024998 . A . . LowGQX END=170025238 GT ./. chr2 170026161 . C . . LowGQX END=170026380 GT ./. chr2 170027010 . T . . LowGQX END=170027229 GT ./. chr2 170028474 . A . . LowGQX END=170028696 GT ./. chr2 170029555 . G . . LowGQX END=170029786 GT ./. chr2 170030378 . C . . LowGQX END=170030726 GT ./. chr2 170031652 . A . . LowGQX END=170031951 GT ./. chr2 170032870 . G . . LowGQX END=170033150 GT ./. chr2 170034262 . C . . LowGQX END=170034588 GT ./. chr2 170037907 . T . . LowGQX END=170038180 GT ./. chr2 170038626 . A . . LowGQX END=170038881 GT ./. chr2 170041962 . T . . LowGQX END=170042581 GT ./. chr2 170044429 . C . . LowGQX END=170044827 GT ./. chr2 170048291 . C . . LowGQX END=170048595 GT ./. chr2 170050220 . T . . LowGQX END=170050454 GT ./. chr2 170053370 . G . . LowGQX END=170053592 GT ./. chr2 170055245 . A . . LowGQX END=170055473 GT ./. chr2 170058087 . G . . LowGQX END=170058432 GT ./. chr2 170059215 . G . . LowGQX END=170059521 GT ./. chr2 170060441 . G . . LowGQX END=170060833 GT ./. chr2 170061938 . T . . LowGQX END=170062199 GT ./. chr2 170062482 . T . . LowGQX END=170062740 GT ./. chr2 170062789 . T . . LowGQX END=170063812 GT ./. chr2 170065912 . A . . LowGQX END=170066203 GT ./. chr2 170068427 . C . . LowGQX END=170068769 GT ./. chr2 170070116 . T . . LowGQX END=170070432 GT ./. chr2 170072712 . C . . LowGQX END=170072992 GT ./. chr2 170076913 . T . . LowGQX END=170077125 GT ./. chr2 170081769 . T . . LowGQX END=170082015 GT ./. chr2 170082881 . G . . LowGQX END=170083150 GT ./. chr2 170088173 . C . . LowGQX END=170088404 GT ./. chr2 170089870 . T . . LowGQX END=170090150 GT ./. chr2 170092299 . T . . LowGQX END=170092640 GT ./. chr2 170093562 . T . . LowGQX END=170093849 GT ./. chr2 170094550 . A . . LowGQX END=170094864 GT ./. chr2 170095986 . T . . LowGQX END=170096337 GT ./. chr2 170097426 . A . . LowGQX END=170097927 GT ./. chr2 170099415 . A . . LowGQX END=170099634 GT ./. chr2 170099862 . G . . LowGQX END=170100084 GT ./. chr2 170101152 . G . . LowGQX END=170101494 GT ./. chr2 170103164 . C . . LowGQX END=170103548 GT ./. chr2 170103837 . A . . LowGQX END=170104077 GT ./. chr2 170112565 . T . . LowGQX END=170112798 GT ./. chr2 170113583 . T . . LowGQX END=170113811 GT ./. chr2 170115484 . C . . LowGQX END=170115779 GT ./. chr2 170127363 . A . . LowGQX END=170127669 GT ./. chr2 170129386 . C . . LowGQX END=170129629 GT ./. chr2 170131495 . C . . LowGQX END=170131800 GT ./. chr2 170134204 . G . . LowGQX END=170134513 GT ./. chr2 170135831 . A . . LowGQX END=170136157 GT ./. chr2 170136809 . A . . LowGQX END=170137081 GT ./. chr2 170139332 . T . . LowGQX END=170139563 GT ./. chr2 170145485 . C . . LowGQX END=170145707 GT ./. chr2 170147304 . A . . LowGQX END=170147559 GT ./. chr2 170148712 . G . . LowGQX END=170148931 GT ./. chr2 170150607 . C . . LowGQX END=170150823 GT ./. chr2 170151059 . A . . LowGQX END=170151272 GT ./. chr2 170163740 . A . . LowGQX END=170163959 GT ./. chr2 170175221 . G . . LowGQX END=170175446 GT ./. chr2 170177236 . A . . LowGQX END=170177446 GT ./. chr2 170218780 . C . . LowGQX END=170218961 GT ./. chr2 170336013 . C . . LowGQX END=170336174 GT ./. chr2 170338710 . C . . LowGQX END=170338895 GT ./. chr2 170343528 . A . . LowGQX END=170343696 GT ./. chr2 170344265 . T . . LowGQX END=170344417 GT ./. chr2 170344446 . A . . LowGQX END=170344666 GT ./. chr2 170349333 . A . . LowGQX END=170349571 GT ./. chr2 170350200 . A . . LowGQX END=170350398 GT ./. chr2 170354086 . C . . LowGQX END=170354251 GT ./. chr2 170355945 . T . . LowGQX END=170356182 GT ./. chr2 170359554 . T . . LowGQX END=170359740 GT ./. chr2 170360755 . T . . LowGQX END=170360888 GT ./. chr2 170360940 . T . . LowGQX END=170361144 GT ./. chr2 170366287 . G . . LowGQX END=170367401 GT ./. chr2 170371082 . A . . LowGQX END=170371244 GT ./. chr2 170371362 . A . . LowGQX END=170371474 GT ./. chr2 170374698 . A . . LowGQX END=170374888 GT ./. chr2 170377369 . A . . LowGQX END=170377520 GT ./. chr2 170382093 . A . . LowGQX END=170382209 GT ./. chr2 170386333 . A . . LowGQX END=170386439 GT ./. chr2 170387095 . A . . LowGQX END=170387214 GT ./. chr2 170387445 . T . . LowGQX END=170387545 GT ./. chr2 170387558 . G . . LowGQX END=170387658 GT ./. chr2 170387751 . C . . LowGQX END=170387851 GT ./. chr2 170387860 . A . . LowGQX END=170388003 GT ./. chr2 170393685 . T . . LowGQX END=170393853 GT ./. chr2 170394521 . A . . LowGQX END=170394654 GT ./. chr2 170396559 . A . . LowGQX END=170396692 GT ./. chr2 170401179 . A . . LowGQX END=170401348 GT ./. chr2 170402726 . A . . LowGQX END=170403217 GT ./. chr2 170411632 . A . . LowGQX END=170411812 GT ./. chr2 170413643 . A . . LowGQX END=170413810 GT ./. chr2 170416895 . A . . LowGQX END=170417298 GT ./. chr2 170419683 . C . . LowGQX END=170419863 GT ./. chr2 170425679 . A . . LowGQX END=170425779 GT ./. chr2 170428161 . A . . LowGQX END=170428542 GT ./. chr2 170440827 . G . . LowGQX END=170441047 GT ./. chr2 170460533 . C . . LowGQX END=170460633 GT ./. chr2 170460685 . C . . LowGQX END=170460785 GT ./. chr2 170462547 . A . . LowGQX END=170462707 GT ./. chr2 170463532 . C . . LowGQX END=170463687 GT ./. chr2 170465175 . C . . LowGQX END=170465275 GT ./. chr2 170470882 . C . . LowGQX END=170471039 GT ./. chr2 170471093 . A . . LowGQX END=170471237 GT ./. chr2 170487252 . T . . LowGQX END=170487502 GT ./. chr2 170488234 . A . . LowGQX END=170488446 GT ./. chr2 170489637 . A . . LowGQX END=170489848 GT ./. chr2 170492600 . A . . LowGQX END=170492741 GT ./. chr2 170492921 . A . . LowGQX END=170494036 GT ./. chr2 170502350 . T . . LowGQX END=170502693 GT ./. chr2 170504636 . G . . LowGQX END=170504736 GT ./. chr2 170505691 . C . . LowGQX END=170505857 GT ./. chr2 170506838 . C . . LowGQX END=170507032 GT ./. chr2 170510584 . C . . LowGQX END=170510725 GT ./. chr2 170518749 . T . . LowGQX END=170518947 GT ./. chr2 170531075 . T . . LowGQX END=170531280 GT ./. chr2 170531376 . C . . LowGQX END=170531551 GT ./. chr2 170537516 . C . . LowGQX END=170537744 GT ./. chr2 170537754 . G . . LowGQX END=170537854 GT ./. chr2 170550754 . A . . LowGQX END=170550854 GT ./. chr2 170557480 . C . . LowGQX END=170558210 GT ./. chr2 170591523 . C . . LowGQX END=170592740 GT ./. chr2 170597893 . A . . LowGQX END=170598050 GT ./. chr2 170605930 . A . . LowGQX END=170606245 GT ./. chr2 170629798 . T . . LowGQX END=170629898 GT ./. chr2 170632916 . C . . LowGQX END=170633016 GT ./. chr2 170657454 . T . . LowGQX END=170657554 GT ./. chr2 170661982 . A . . LowGQX END=170662090 GT ./. chr2 170662173 . A . . LowGQX END=170662352 GT ./. chr2 170662487 . T . . LowGQX END=170662587 GT ./. chr2 170663293 . A . . LowGQX END=170663405 GT ./. chr2 170663479 . A . . LowGQX END=170663584 GT ./. chr2 170664978 . T . . LowGQX END=170665078 GT ./. chr2 170665342 . T . . LowGQX END=170665442 GT ./. chr2 170665445 . G . . LowGQX END=170665545 GT ./. chr2 170666791 . A . . LowGQX END=170666981 GT ./. chr2 170667366 . A . . LowGQX END=170667566 GT ./. chr2 170667651 . T . . LowGQX END=170667836 GT ./. chr2 170668173 . T . . LowGQX END=170668273 GT ./. chr2 170668300 . G . . LowGQX END=170668400 GT ./. chr2 170668822 . C . . LowGQX END=170669035 GT ./. chr2 170671963 . T . . LowGQX END=170672063 GT ./. chr2 170676063 . G . . LowGQX END=170676163 GT ./. chr2 170677600 . A . . LowGQX END=170677786 GT ./. chr2 170678451 . A . . LowGQX END=170678570 GT ./. chr2 170680997 . A . . LowGQX END=170681110 GT ./. chr2 170684006 . T . . LowGQX END=170684563 GT ./. chr2 170728745 . G . . LowGQX END=170728925 GT ./. chr2 170732300 . G . . LowGQX END=170732460 GT ./. chr2 170734003 . G . . LowGQX END=170734183 GT ./. chr2 170735010 . C . . LowGQX END=170735110 GT ./. chr2 170747658 . A . . LowGQX END=170747758 GT ./. chr2 170751690 . G . . LowGQX END=170751870 GT ./. chr2 170753016 . G . . LowGQX END=170753246 GT ./. chr2 170761623 . G . . LowGQX END=170761804 GT ./. chr2 170762540 . G . . LowGQX END=170762675 GT ./. chr2 170770563 . A . . LowGQX END=170770663 GT ./. chr2 170780422 . T . . LowGQX END=170780522 GT ./. chr2 170780589 . T . . LowGQX END=170780689 GT ./. chr2 170782128 . G . . LowGQX END=170782258 GT ./. chr2 170783178 . A . . LowGQX END=170783278 GT ./. chr2 170783347 . G . . LowGQX END=170783482 GT ./. chr2 170783824 . T . . LowGQX END=170783924 GT ./. chr2 170785236 . T . . LowGQX END=170785379 GT ./. chr2 170789360 . A . . LowGQX END=170789571 GT ./. chr2 170799002 . G . . LowGQX END=170799145 GT ./. chr2 170802747 . T . . LowGQX END=170802903 GT ./. chr2 170804051 . G . . LowGQX END=170804226 GT ./. chr2 170806114 . G . . LowGQX END=170806578 GT ./. chr2 170814943 . T . . LowGQX END=170815043 GT ./. chr2 170820890 . T . . LowGQX END=170820990 GT ./. chr2 170821378 . A . . LowGQX END=170821478 GT ./. chr2 170843153 . A . . LowGQX END=170843307 GT ./. chr2 170850831 . A . . LowGQX END=170850969 GT ./. chr2 170857812 . A . . LowGQX END=170857927 GT ./. chr2 170863498 . A . . LowGQX END=170863713 GT ./. chr2 170865312 . A . . LowGQX END=170865492 GT ./. chr2 170870351 . A . . LowGQX END=170870481 GT ./. chr2 170871784 . C . . LowGQX END=170871884 GT ./. chr2 170873336 . C . . LowGQX END=170873436 GT ./. chr2 170885854 . A . . LowGQX END=170885961 GT ./. chr2 170897390 . A . . LowGQX END=170897498 GT ./. chr2 170911968 . A . . LowGQX END=170912097 GT ./. chr2 170917587 . A . . LowGQX END=170917699 GT ./. chr2 170917826 . A . . LowGQX END=170917956 GT ./. chr2 170929916 . T . . LowGQX END=170930120 GT ./. chr2 170936322 . A . . LowGQX END=170936536 GT ./. chr2 170937053 . A . . LowGQX END=170937197 GT ./. chr2 170938234 . A . . LowGQX END=170938356 GT ./. chr2 171034749 . G . . LowGQX END=171034849 GT ./. chr2 171036627 . G . . LowGQX END=171036727 GT ./. chr2 171055716 . A . . LowGQX END=171055904 GT ./. chr2 171056658 . A . . LowGQX END=171056797 GT ./. chr2 171070887 . A . . LowGQX END=171070996 GT ./. chr2 171071237 . A . . LowGQX END=171071341 GT ./. chr2 171073818 . T . . LowGQX END=171073918 GT ./. chr2 171092449 . C . . LowGQX END=171092698 GT ./. chr2 171191878 . T . . LowGQX END=171191978 GT ./. chr2 171225730 . A . . LowGQX END=171225890 GT ./. chr2 171238524 . A . . LowGQX END=171238638 GT ./. chr2 171239581 . A . . LowGQX END=171239702 GT ./. chr2 171240218 . A . . LowGQX END=171240327 GT ./. chr2 171242691 . T . . LowGQX END=171242791 GT ./. chr2 171243614 . A . . LowGQX END=171243821 GT ./. chr2 171248028 . A . . LowGQX END=171248188 GT ./. chr2 171248889 . A . . LowGQX END=171249008 GT ./. chr2 171256696 . A . . LowGQX END=171256827 GT ./. chr2 171257989 . A . . LowGQX END=171258204 GT ./. chr2 171259356 . A . . LowGQX END=171259508 GT ./. chr2 171260755 . A . . LowGQX END=171260913 GT ./. chr2 171262050 . C . . LowGQX END=171262150 GT ./. chr2 171264223 . A . . LowGQX END=171264357 GT ./. chr2 171300467 . T . . LowGQX END=171300567 GT ./. chr2 171319867 . T . . LowGQX END=171319967 GT ./. chr2 171323014 . A . . LowGQX END=171323224 GT ./. chr2 171355100 . A . . LowGQX END=171355216 GT ./. chr2 171356154 . A . . LowGQX END=171356321 GT ./. chr2 171358286 . T . . LowGQX END=171358386 GT ./. chr2 171371429 . A . . LowGQX END=171371535 GT ./. chr2 171375946 . A . . LowGQX END=171376055 GT ./. chr2 171380973 . T . . LowGQX END=171381137 GT ./. chr2 171399397 . A . . LowGQX END=171399497 GT ./. chr2 171400400 . A . . LowGQX END=171400501 GT ./. chr2 171503384 . G . . LowGQX END=171503484 GT ./. chr2 171508136 . A . . LowGQX END=171508247 GT ./. chr2 171508592 . C . . LowGQX END=171508692 GT ./. chr2 171509491 . A . . LowGQX END=171509634 GT ./. chr2 171570130 . G . . LowGQX END=171570960 GT ./. chr2 171571939 . G . . LowGQX END=171572099 GT ./. chr2 171572757 . C . . LowGQX END=171573917 GT ./. chr2 171640313 . A . . LowGQX END=171640413 GT ./. chr2 171641155 . G . . LowGQX END=171641344 GT ./. chr2 171649352 . G . . LowGQX END=171649452 GT ./. chr2 171654537 . A . . LowGQX END=171654637 GT ./. chr2 171655279 . G . . LowGQX END=171655405 GT ./. chr2 171675051 . C . . LowGQX END=171675235 GT ./. chr2 171678546 . C . . LowGQX END=171678711 GT ./. chr2 171685934 . A . . LowGQX END=171686195 GT ./. chr2 171687409 . A . . LowGQX END=171687754 GT ./. chr2 171693252 . A . . LowGQX END=171693445 GT ./. chr2 171699027 . C . . LowGQX END=171699167 GT ./. chr2 171700504 . G . . LowGQX END=171700719 GT ./. chr2 171701965 . A . . LowGQX END=171702347 GT ./. chr2 171702468 . C . . LowGQX END=171702625 GT ./. chr2 171704135 . A . . LowGQX END=171704354 GT ./. chr2 171705193 . G . . LowGQX END=171705305 GT ./. chr2 171705745 . A . . LowGQX END=171705912 GT ./. chr2 171709173 . T . . LowGQX END=171709354 GT ./. chr2 171710332 . C . . LowGQX END=171710584 GT ./. chr2 171713477 . G . . LowGQX END=171713687 GT ./. chr2 171715263 . T . . LowGQX END=171715455 GT ./. chr2 171716168 . A . . LowGQX END=171716444 GT ./. chr2 171785773 . C . . LowGQX END=171785933 GT ./. chr2 171786230 . T . . LowGQX END=171786407 GT ./. chr2 171793134 . C . . LowGQX END=171793238 GT ./. chr2 171804798 . T . . LowGQX END=171804951 GT ./. chr2 171806037 . A . . LowGQX END=171806255 GT ./. chr2 171806652 . A . . LowGQX END=171806808 GT ./. chr2 171807836 . A . . LowGQX END=171807971 GT ./. chr2 171811158 . A . . LowGQX END=171811295 GT ./. chr2 171812944 . A . . LowGQX END=171813072 GT ./. chr2 171818167 . T . . LowGQX END=171818267 GT ./. chr2 171819347 . A . . LowGQX END=171819459 GT ./. chr2 171822298 . A . . LowGQX END=171822643 GT ./. chr2 171850288 . A . . LowGQX END=171850469 GT ./. chr2 171851168 . C . . LowGQX END=171851268 GT ./. chr2 171853161 . A . . LowGQX END=171853273 GT ./. chr2 171854220 . A . . LowGQX END=171854336 GT ./. chr2 171862655 . A . . LowGQX END=171862795 GT ./. chr2 171862982 . A . . LowGQX END=171863236 GT ./. chr2 171863305 . C . . LowGQX END=171863405 GT ./. chr2 171863478 . T . . LowGQX END=171863578 GT ./. chr2 171867874 . A . . LowGQX END=171867974 GT ./. chr2 171871359 . A . . LowGQX END=171871461 GT ./. chr2 171879589 . T . . LowGQX END=171879689 GT ./. chr2 171884773 . T . . LowGQX END=171884933 GT ./. chr2 171902680 . T . . LowGQX END=171902875 GT ./. chr2 171906322 . A . . LowGQX END=171906463 GT ./. chr2 171906572 . A . . LowGQX END=171906687 GT ./. chr2 171910268 . T . . LowGQX END=171910368 GT ./. chr2 171911588 . T . . LowGQX END=171911741 GT ./. chr2 171912979 . A . . LowGQX END=171913079 GT ./. chr2 171914635 . A . . LowGQX END=171914735 GT ./. chr2 171916355 . T . . LowGQX END=171916515 GT ./. chr2 171917579 . T . . LowGQX END=171917679 GT ./. chr2 171923323 . A . . LowGQX END=171923423 GT ./. chr2 171938160 . C . . LowGQX END=171938260 GT ./. chr2 171939219 . A . . LowGQX END=171939377 GT ./. chr2 171974247 . A . . LowGQX END=171974370 GT ./. chr2 172016758 . G . . LowGQX END=172016978 GT ./. chr2 172180681 . T . . LowGQX END=172180873 GT ./. chr2 172182335 . T . . LowGQX END=172182435 GT ./. chr2 172182551 . C . . LowGQX END=172182659 GT ./. chr2 172187067 . A . . LowGQX END=172187211 GT ./. chr2 172188275 . C . . LowGQX END=172188380 GT ./. chr2 172193938 . T . . LowGQX END=172194038 GT ./. chr2 172195692 . A . . LowGQX END=172196067 GT ./. chr2 172216927 . A . . LowGQX END=172217027 GT ./. chr2 172248552 . C . . LowGQX END=172248696 GT ./. chr2 172290760 . C . . LowGQX END=172291265 GT ./. chr2 172291542 . A . . LowGQX END=172291748 GT ./. chr2 172299982 . T . . LowGQX END=172300175 GT ./. chr2 172303845 . A . . LowGQX END=172304014 GT ./. chr2 172305140 . A . . LowGQX END=172305379 GT ./. chr2 172306338 . G . . LowGQX END=172306519 GT ./. chr2 172309583 . G . . LowGQX END=172309775 GT ./. chr2 172314430 . G . . LowGQX END=172314637 GT ./. chr2 172314831 . A . . LowGQX END=172315029 GT ./. chr2 172325347 . C . . LowGQX END=172325592 GT ./. chr2 172329373 . T . . LowGQX END=172329473 GT ./. chr2 172330325 . T . . LowGQX END=172330537 GT ./. chr2 172333319 . T . . LowGQX END=172333512 GT ./. chr2 172334446 . A . . LowGQX END=172334632 GT ./. chr2 172336497 . G . . LowGQX END=172336755 GT ./. chr2 172337433 . A . . LowGQX END=172341563 GT ./. chr2 172378702 . C . . LowGQX END=172378802 GT ./. chr2 172379005 . G . . LowGQX END=172379300 GT ./. chr2 172379675 . C . . LowGQX END=172379835 GT ./. chr2 172398044 . T . . LowGQX END=172398355 GT ./. chr2 172409805 . T . . LowGQX END=172410062 GT ./. chr2 172410983 . C . . LowGQX END=172411389 GT ./. chr2 172546665 . C . . LowGQX END=172546774 GT ./. chr2 172549286 . G . . LowGQX END=172549405 GT ./. chr2 172549417 . A . . LowGQX END=172549517 GT ./. chr2 172563016 . A . . LowGQX END=172563116 GT ./. chr2 172563702 . T . . LowGQX END=172563888 GT ./. chr2 172569257 . G . . LowGQX END=172569357 GT ./. chr2 172571837 . G . . LowGQX END=172571954 GT ./. chr2 172582126 . A . . LowGQX END=172582277 GT ./. chr2 172582428 . G . . LowGQX END=172582592 GT ./. chr2 172582703 . G . . LowGQX END=172582804 GT ./. chr2 172583262 . A . . LowGQX END=172583427 GT ./. chr2 172584330 . G . . LowGQX END=172584478 GT ./. chr2 172584814 . G . . LowGQX END=172584929 GT ./. chr2 172585226 . G . . LowGQX END=172585406 GT ./. chr2 172586218 . G . . LowGQX END=172586364 GT ./. chr2 172600558 . G . . LowGQX END=172600700 GT ./. chr2 172602311 . G . . LowGQX END=172602438 GT ./. chr2 172604285 . G . . LowGQX END=172604400 GT ./. chr2 172641733 . C . . LowGQX END=172642037 GT ./. chr2 172644030 . T . . LowGQX END=172644223 GT ./. chr2 172644248 . G . . LowGQX END=172644509 GT ./. chr2 172647910 . C . . LowGQX END=172648151 GT ./. chr2 172650086 . T . . LowGQX END=172650329 GT ./. chr2 172666065 . A . . LowGQX END=172666248 GT ./. chr2 172666683 . C . . LowGQX END=172666838 GT ./. chr2 172669798 . T . . LowGQX END=172670059 GT ./. chr2 172671580 . A . . LowGQX END=172671764 GT ./. chr2 172683257 . T . . LowGQX END=172683444 GT ./. chr2 172690422 . T . . LowGQX END=172690618 GT ./. chr2 172691186 . A . . LowGQX END=172691427 GT ./. chr2 172693580 . G . . LowGQX END=172693829 GT ./. chr2 172700828 . G . . LowGQX END=172701070 GT ./. chr2 172702276 . C . . LowGQX END=172702376 GT ./. chr2 172704683 . C . . LowGQX END=172704787 GT ./. chr2 172709139 . A . . LowGQX END=172709239 GT ./. chr2 172712293 . G . . LowGQX END=172712511 GT ./. chr2 172725140 . A . . LowGQX END=172725385 GT ./. chr2 172749664 . T . . LowGQX END=172749820 GT ./. chr2 172750659 . G . . LowGQX END=172750776 GT ./. chr2 172778905 . G . . LowGQX END=172779065 GT ./. chr2 172782045 . A . . LowGQX END=172782154 GT ./. chr2 172803156 . A . . LowGQX END=172803316 GT ./. chr2 172809397 . A . . LowGQX END=172809522 GT ./. chr2 172821857 . A . . LowGQX END=172822041 GT ./. chr2 172822306 . A . . LowGQX END=172822432 GT ./. chr2 172822928 . A . . LowGQX END=172823037 GT ./. chr2 172823362 . A . . LowGQX END=172823473 GT ./. chr2 172841094 . A . . LowGQX END=172841250 GT ./. chr2 172844158 . A . . LowGQX END=172844358 GT ./. chr2 172848097 . A . . LowGQX END=172848269 GT ./. chr2 172864787 . A . . LowGQX END=172864947 GT ./. chr2 172926224 . A . . LowGQX END=172926386 GT ./. chr2 172928397 . G . . LowGQX END=172928591 GT ./. chr2 172930330 . A . . LowGQX END=172930483 GT ./. chr2 172930910 . A . . LowGQX END=172931064 GT ./. chr2 172935633 . A . . LowGQX END=172935801 GT ./. chr2 172942523 . A . . LowGQX END=172942625 GT ./. chr2 172943917 . C . . LowGQX END=172944017 GT ./. chr2 172944846 . C . . LowGQX END=172944946 GT ./. chr2 172945046 . T . . LowGQX END=172945146 GT ./. chr2 172950404 . A . . LowGQX END=172950721 GT ./. chr2 172951380 . A . . LowGQX END=172951822 GT ./. chr2 172952239 . C . . PASS END=172952248;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:24:54:59 chr2 172952249 . T . . PASS END=172952256;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:37:84:59 chr2 172952257 . C . . PASS END=172952266;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:47:81:60 chr2 172952267 . T . . PASS . GT:DP:GQX:MQ 0/0:53:71:60 chr2 172952268 . C . . PASS END=172952339;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:53:99:60 chr2 172952729 . A . . PASS END=172952916;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:62:90:60 chr2 172952917 . A . . PASS END=172952943;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:65:99:60 chr2 172952944 . T . . PASS END=172952962;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:48:81:60 chr2 172952963 . T . . PASS END=172952964;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:47:81:60 chr2 172952965 . C . . PASS . GT:DP:GQX:MQ 0/0:47:54:60 chr2 172952966 . A . . PASS END=172952972;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:37:63:60 chr2 172952973 . C . . PASS END=172952988;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:31:54:60 chr2 172965258 . G . . LowGQX END=172965679 GT ./. chr2 172966120 . C . . LowGQX END=172966377 GT ./. chr2 172966865 . A . . LowGQX END=172967269 GT ./. chr2 173292466 . A . . LowGQX END=173292750 GT ./. chr2 173330216 . T . . LowGQX END=173330443 GT ./. chr2 173332158 . G . . LowGQX END=173332340 GT ./. chr2 173333802 . A . . LowGQX END=173334160 GT ./. chr2 173335651 . C . . LowGQX END=173335885 GT ./. chr2 173337501 . G . . LowGQX END=173337619 GT ./. chr2 173338732 . C . . LowGQX END=173339045 GT ./. chr2 173339606 . C . . LowGQX END=173339902 GT ./. chr2 173340274 . G . . LowGQX END=173340465 GT ./. chr2 173341072 . G . . LowGQX END=173341293 GT ./. chr2 173344318 . A . . LowGQX END=173344519 GT ./. chr2 173344667 . T . . LowGQX END=173344831 GT ./. chr2 173349459 . C . . LowGQX END=173349722 GT ./. chr2 173349798 . C . . LowGQX END=173350044 GT ./. chr2 173351700 . T . . LowGQX END=173351918 GT ./. chr2 173351941 . A . . LowGQX END=173352400 GT ./. chr2 173352405 . T . . LowGQX END=173352587 GT ./. chr2 173352638 . G . . LowGQX END=173353008 GT ./. chr2 173354162 . A . . LowGQX END=173354438 GT ./. chr2 173355701 . A . . LowGQX END=173356303 GT ./. chr2 173362652 . T . . LowGQX END=173362870 GT ./. chr2 173366449 . G . . LowGQX END=173366659 GT ./. chr2 173368818 . G . . LowGQX END=173368981 GT ./. chr2 173420864 . C . . LowGQX END=173421077 GT ./. chr2 173423434 . A . . LowGQX END=173423614 GT ./. chr2 173426934 . G . . LowGQX END=173427034 GT ./. chr2 173427449 . A . . LowGQX END=173427549 GT ./. chr2 173428732 . T . . LowGQX END=173428832 GT ./. chr2 173429229 . A . . LowGQX END=173429418 GT ./. chr2 173429704 . A . . LowGQX END=173429804 GT ./. chr2 173431573 . A . . LowGQX END=173431673 GT ./. chr2 173433458 . C . . LowGQX END=173433558 GT ./. chr2 173435452 . A . . LowGQX END=173435555 GT ./. chr2 173451004 . A . . LowGQX END=173451119 GT ./. chr2 173457661 . A . . LowGQX END=173457779 GT ./. chr2 173460555 . A . . LowGQX END=173460700 GT ./. chr2 173600635 . G . . LowGQX END=173600795 GT ./. chr2 173609095 . T . . LowGQX END=173609195 GT ./. chr2 173659751 . A . . LowGQX END=173659898 GT ./. chr2 173662248 . C . . LowGQX END=173662348 GT ./. chr2 173679005 . A . . LowGQX END=173679244 GT ./. chr2 173686649 . C . . LowGQX END=173686749 GT ./. chr2 173782141 . A . . LowGQX END=173782241 GT ./. chr2 173782517 . T . . LowGQX END=173782617 GT ./. chr2 173782709 . G . . LowGQX END=173782809 GT ./. chr2 173786969 . A . . LowGQX END=173787069 GT ./. chr2 173792894 . A . . LowGQX END=173792994 GT ./. chr2 173825465 . T . . LowGQX END=173825565 GT ./. chr2 173825848 . A . . LowGQX END=173825959 GT ./. chr2 173830288 . A . . LowGQX END=173830414 GT ./. chr2 173831987 . A . . LowGQX END=173832175 GT ./. chr2 173848217 . T . . LowGQX END=173848317 GT ./. chr2 173850089 . G . . LowGQX END=173850245 GT ./. chr2 173852913 . T . . LowGQX END=173853013 GT ./. chr2 173853419 . A . . LowGQX END=173853570 GT ./. chr2 173855536 . A . . LowGQX END=173855656 GT ./. chr2 173861189 . T . . LowGQX END=173861342 GT ./. chr2 173865984 . C . . LowGQX END=173866084 GT ./. chr2 173879150 . T . . LowGQX END=173879345 GT ./. chr2 173881072 . T . . LowGQX END=173881172 GT ./. chr2 173881868 . G . . LowGQX END=173881968 GT ./. chr2 173882144 . G . . LowGQX END=173882244 GT ./. chr2 173883382 . A . . LowGQX END=173883533 GT ./. chr2 173885274 . T . . LowGQX END=173885446 GT ./. chr2 173891298 . A . . LowGQX END=173891428 GT ./. chr2 173891807 . A . . LowGQX END=173891990 GT ./. chr2 173894888 . T . . LowGQX END=173894988 GT ./. chr2 173898560 . T . . LowGQX END=173898718 GT ./. chr2 173900847 . C . . LowGQX END=173900947 GT ./. chr2 173901345 . T . . LowGQX END=173901445 GT ./. chr2 173913306 . C . . LowGQX END=173913406 GT ./. chr2 173916366 . A . . LowGQX END=173916498 GT ./. chr2 173955758 . A . . LowGQX END=173955921 GT ./. chr2 174034527 . G . . LowGQX END=174034681 GT ./. chr2 174047580 . A . . LowGQX END=174047740 GT ./. chr2 174052269 . T . . LowGQX END=174052369 GT ./. chr2 174055588 . T . . LowGQX END=174055688 GT ./. chr2 174055766 . A . . LowGQX END=174055908 GT ./. chr2 174062748 . T . . LowGQX END=174062848 GT ./. chr2 174068512 . T . . LowGQX END=174068612 GT ./. chr2 174074455 . A . . LowGQX END=174074652 GT ./. chr2 174081841 . A . . LowGQX END=174081981 GT ./. chr2 174085876 . A . . LowGQX END=174086261 GT ./. chr2 174094390 . T . . LowGQX END=174094490 GT ./. chr2 174096886 . A . . LowGQX END=174096986 GT ./. chr2 174097046 . A . . LowGQX END=174097190 GT ./. chr2 174103083 . A . . LowGQX END=174103183 GT ./. chr2 174104129 . T . . LowGQX END=174104229 GT ./. chr2 174123425 . A . . LowGQX END=174123546 GT ./. chr2 174125779 . T . . LowGQX END=174125879 GT ./. chr2 174128441 . T . . LowGQX END=174128626 GT ./. chr2 174130776 . A . . LowGQX END=174131481 GT ./. chr2 174219593 . C . . LowGQX END=174219753 GT ./. chr2 174223438 . A . . LowGQX END=174223568 GT ./. chr2 174223981 . A . . LowGQX END=174224222 GT ./. chr2 174227952 . A . . LowGQX END=174228193 GT ./. chr2 174228535 . T . . LowGQX END=174228635 GT ./. chr2 174229511 . T . . LowGQX END=174229720 GT ./. chr2 174230178 . A . . LowGQX END=174230323 GT ./. chr2 174231009 . A . . LowGQX END=174231163 GT ./. chr2 174231876 . A . . LowGQX END=174232055 GT ./. chr2 174232270 . A . . LowGQX END=174232428 GT ./. chr2 174774656 . A . . LowGQX END=174774996 GT ./. chr2 174777796 . A . . LowGQX END=174777997 GT ./. chr2 174783319 . A . . LowGQX END=174783516 GT ./. chr2 174819599 . A . . LowGQX END=174820963 GT ./. chr2 174828446 . G . . LowGQX END=174828657 GT ./. chr2 174829110 . G . . LowGQX END=174829284 GT ./. chr2 174829847 . C . . LowGQX END=174829947 GT ./. chr2 174940146 . A . . LowGQX END=174940306 GT ./. chr2 174943694 . A . . LowGQX END=174943821 GT ./. chr2 174945818 . A . . LowGQX END=174945979 GT ./. chr2 174946650 . A . . LowGQX END=174946795 GT ./. chr2 174987846 . G . . LowGQX END=174988008 GT ./. chr2 174988314 . A . . LowGQX END=174988414 GT ./. chr2 175006551 . A . . LowGQX END=175006761 GT ./. chr2 175087759 . A . . LowGQX END=175087891 GT ./. chr2 175093994 . C . . LowGQX END=175094182 GT ./. chr2 175111441 . A . . LowGQX END=175111546 GT ./. chr2 175112378 . T . . LowGQX END=175112478 GT ./. chr2 175199781 . A . . LowGQX END=175199881 GT ./. chr2 175200823 . C . . LowGQX END=175202269 GT ./. chr2 175213223 . C . . LowGQX END=175213903 GT ./. chr2 175215381 . A . . LowGQX END=175215481 GT ./. chr2 175216345 . A . . LowGQX END=175216456 GT ./. chr2 175223115 . G . . LowGQX END=175223271 GT ./. chr2 175234689 . G . . LowGQX END=175234789 GT ./. chr2 175243579 . A . . LowGQX END=175243771 GT ./. chr2 175244905 . A . . LowGQX END=175245005 GT ./. chr2 175245372 . T . . LowGQX END=175245472 GT ./. chr2 175245488 . C . . LowGQX END=175245588 GT ./. chr2 175246419 . A . . LowGQX END=175246519 GT ./. chr2 175252351 . G . . LowGQX END=175252511 GT ./. chr2 175260265 . G . . LowGQX END=175260365 GT ./. chr2 175260465 . G . . LowGQX END=175260565 GT ./. chr2 175263010 . A . . LowGQX END=175263200 GT ./. chr2 175264648 . A . . LowGQX END=175264848 GT ./. chr2 175265716 . A . . LowGQX END=175265920 GT ./. chr2 175268829 . A . . LowGQX END=175269046 GT ./. chr2 175287611 . A . . LowGQX END=175287778 GT ./. chr2 175289201 . A . . LowGQX END=175289380 GT ./. chr2 175292439 . A . . LowGQX END=175292626 GT ./. chr2 175300842 . A . . LowGQX END=175301147 GT ./. chr2 175304584 . T . . LowGQX END=175304766 GT ./. chr2 175306775 . A . . LowGQX END=175306930 GT ./. chr2 175309807 . A . . LowGQX END=175309907 GT ./. chr2 175311337 . A . . LowGQX END=175311517 GT ./. chr2 175318463 . A . . LowGQX END=175318572 GT ./. chr2 175324604 . A . . LowGQX END=175324819 GT ./. chr2 175326126 . C . . LowGQX END=175326226 GT ./. chr2 175326309 . A . . LowGQX END=175326409 GT ./. chr2 175330511 . A . . LowGQX END=175330633 GT ./. chr2 175331210 . T . . LowGQX END=175331364 GT ./. chr2 175333638 . A . . LowGQX END=175333798 GT ./. chr2 175335096 . T . . LowGQX END=175335286 GT ./. chr2 175337681 . A . . LowGQX END=175338095 GT ./. chr2 175346223 . A . . LowGQX END=175346687 GT ./. chr2 175426791 . G . . LowGQX END=175426891 GT ./. chr2 175427253 . G . . LowGQX END=175427353 GT ./. chr2 175431771 . T . . LowGQX END=175431914 GT ./. chr2 175432587 . A . . LowGQX END=175432804 GT ./. chr2 175436320 . G . . LowGQX END=175437184 GT ./. chr2 175439601 . T . . LowGQX END=175439701 GT ./. chr2 175439930 . A . . LowGQX END=175440111 GT ./. chr2 175446036 . A . . LowGQX END=175446170 GT ./. chr2 175450167 . T . . LowGQX END=175450379 GT ./. chr2 175612801 . T . . LowGQX END=175613035 GT ./. chr2 175613257 . A . . LowGQX END=175613599 GT ./. chr2 175614623 . A . . LowGQX END=175614949 GT ./. chr2 175618165 . C . . LowGQX END=175618520 GT ./. chr2 175618896 . C . . LowGQX END=175619194 GT ./. chr2 175622243 . T . . LowGQX END=175622455 GT ./. chr2 175622621 . A . . LowGQX END=175622800 GT ./. chr2 175624008 . A . . LowGQX END=175624155 GT ./. chr2 175624165 . A . . LowGQX END=175624413 GT ./. chr2 175629021 . C . . LowGQX END=175629174 GT ./. chr2 175664041 . T . . LowGQX END=175665016 GT ./. chr2 175666434 . C . . LowGQX END=175666558 GT ./. chr2 175673622 . T . . LowGQX END=175673771 GT ./. chr2 175676218 . G . . LowGQX END=175676318 GT ./. chr2 175677036 . C . . LowGQX END=175677211 GT ./. chr2 175686433 . T . . LowGQX END=175686533 GT ./. chr2 175689161 . C . . LowGQX END=175689274 GT ./. chr2 175711028 . T . . LowGQX END=175711128 GT ./. chr2 175711607 . C . . LowGQX END=175711860 GT ./. chr2 175712411 . A . . LowGQX END=175712511 GT ./. chr2 175742567 . C . . LowGQX END=175742857 GT ./. chr2 175779785 . C . . LowGQX END=175779913 GT ./. chr2 175783228 . A . . LowGQX END=175783328 GT ./. chr2 175785673 . T . . LowGQX END=175785773 GT ./. chr2 175809614 . A . . LowGQX END=175809714 GT ./. chr2 175809936 . C . . LowGQX END=175810036 GT ./. chr2 175816851 . T . . LowGQX END=175817011 GT ./. chr2 175869541 . C . . LowGQX END=175869701 GT ./. chr2 175869922 . G . . LowGQX END=175870108 GT ./. chr2 175939335 . A . . LowGQX END=175939642 GT ./. chr2 175945386 . A . . LowGQX END=175945496 GT ./. chr2 175957293 . C . . LowGQX END=175957393 GT ./. chr2 175957787 . A . . LowGQX END=175957998 GT ./. chr2 175962170 . A . . LowGQX END=175962350 GT ./. chr2 175976290 . G . . LowGQX END=175976390 GT ./. chr2 175978670 . G . . LowGQX END=175978839 GT ./. chr2 175979413 . C . . LowGQX END=175979599 GT ./. chr2 175982716 . A . . LowGQX END=175982849 GT ./. chr2 175982977 . A . . LowGQX END=175983147 GT ./. chr2 175986170 . A . . LowGQX END=175986271 GT ./. chr2 175994794 . A . . LowGQX END=175994951 GT ./. chr2 176001048 . C . . LowGQX END=176001206 GT ./. chr2 176032350 . C . . LowGQX END=176032450 GT ./. chr2 176043014 . T . . LowGQX END=176043133 GT ./. chr2 176043780 . A . . LowGQX END=176043981 GT ./. chr2 176044764 . T . . LowGQX END=176044917 GT ./. chr2 176046053 . A . . LowGQX END=176046153 GT ./. chr2 176794693 . T . . LowGQX END=176794930 GT ./. chr2 176796835 . A . . LowGQX END=176796935 GT ./. chr2 176802070 . A . . LowGQX END=176802245 GT ./. chr2 176803027 . C . . LowGQX END=176803127 GT ./. chr2 176804278 . A . . LowGQX END=176804388 GT ./. chr2 176805652 . G . . LowGQX END=176805812 GT ./. chr2 176812206 . A . . LowGQX END=176812423 GT ./. chr2 176829076 . A . . LowGQX END=176829176 GT ./. chr2 176829226 . A . . LowGQX END=176829326 GT ./. chr2 176835403 . G . . LowGQX END=176835620 GT ./. chr2 176844466 . A . . LowGQX END=176844618 GT ./. chr2 176856947 . T . . LowGQX END=176857149 GT ./. chr2 176857828 . G . . LowGQX END=176857981 GT ./. chr2 176860278 . T . . LowGQX END=176860378 GT ./. chr2 176866887 . C . . LowGQX END=176867019 GT ./. chr2 176944822 . G . . LowGQX END=176945569 GT ./. chr2 176946904 . A . . LowGQX END=176947180 GT ./. chr2 176948076 . A . . LowGQX END=176948507 GT ./. chr2 176957568 . G . . LowGQX END=176958451 GT ./. chr2 176959157 . G . . LowGQX END=176959510 GT ./. chr2 176964529 . G . . LowGQX END=176965184 GT ./. chr2 176965249 . G . . LowGQX END=176965489 GT ./. chr2 176972012 . T . . LowGQX END=176972932 GT ./. chr2 176973633 . A . . LowGQX END=176973873 GT ./. chr2 176981511 . G . . LowGQX END=176982358 GT ./. chr2 176983631 . C . . LowGQX END=176984011 GT ./. chr2 176987496 . A . . LowGQX END=176988316 GT ./. chr2 176988660 . A . . LowGQX END=176988906 GT ./. chr2 176993440 . A . . LowGQX END=176993906 GT ./. chr2 176994059 . T . . LowGQX END=176994374 GT ./. chr2 176995093 . C . . LowGQX END=176995674 GT ./. chr2 176996043 . A . . LowGQX END=176996343 GT ./. chr2 177015031 . C . . LowGQX END=177015191 GT ./. chr2 177016311 . A . . LowGQX END=177016846 GT ./. chr2 177017285 . T . . LowGQX END=177017722 GT ./. chr2 177033841 . C . . LowGQX END=177034386 GT ./. chr2 177036243 . A . . LowGQX END=177037005 GT ./. chr2 177053403 . G . . LowGQX END=177054186 GT ./. chr2 177054276 . G . . LowGQX END=177054410 GT ./. chr2 177054534 . A . . LowGQX END=177054873 GT ./. chr2 177134328 . G . . LowGQX END=177134428 GT ./. chr2 177134930 . C . . LowGQX END=177135030 GT ./. chr2 177135093 . G . . LowGQX END=177135193 GT ./. chr2 177161562 . T . . LowGQX END=177161662 GT ./. chr2 177162551 . A . . LowGQX END=177162651 GT ./. chr2 177188107 . T . . LowGQX END=177188207 GT ./. chr2 177191491 . A . . LowGQX END=177191642 GT ./. chr2 177193018 . T . . LowGQX END=177193118 GT ./. chr2 177193572 . A . . LowGQX END=177193672 GT ./. chr2 177194027 . A . . LowGQX END=177194157 GT ./. chr2 177195301 . G . . LowGQX END=177195401 GT ./. chr2 177202219 . A . . LowGQX END=177202395 GT ./. chr2 177465695 . A . . LowGQX END=177465795 GT ./. chr2 178077455 . T . . LowGQX END=178077614 GT ./. chr2 178080265 . A . . LowGQX END=178080392 GT ./. chr2 178080476 . A . . LowGQX END=178080627 GT ./. chr2 178080704 . A . . LowGQX END=178080919 GT ./. chr2 178081226 . T . . LowGQX END=178081326 GT ./. chr2 178081402 . A . . LowGQX END=178081502 GT ./. chr2 178081526 . G . . LowGQX END=178081679 GT ./. chr2 178082390 . C . . LowGQX END=178082576 GT ./. chr2 178083763 . A . . LowGQX END=178083890 GT ./. chr2 178083952 . T . . LowGQX END=178084052 GT ./. chr2 178092550 . C . . LowGQX END=178092710 GT ./. chr2 178095511 . A . . LowGQX END=178096739 GT ./. chr2 178097118 . A . . LowGQX END=178097314 GT ./. chr2 178097865 . A . . LowGQX END=178098104 GT ./. chr2 178098691 . T . . LowGQX END=178099002 GT ./. chr2 178129173 . T . . LowGQX END=178129333 GT ./. chr2 178257467 . G . . LowGQX END=178257829 GT ./. chr2 178284946 . T . . LowGQX END=178285138 GT ./. chr2 178299004 . A . . LowGQX END=178299197 GT ./. chr2 178301441 . C . . LowGQX END=178301834 GT ./. chr2 178305642 . C . . LowGQX END=178305816 GT ./. chr2 178307084 . G . . LowGQX END=178307266 GT ./. chr2 178310223 . G . . LowGQX END=178310406 GT ./. chr2 178326570 . G . . LowGQX END=178326798 GT ./. chr2 178333093 . C . . LowGQX END=178333304 GT ./. chr2 178346736 . T . . LowGQX END=178346966 GT ./. chr2 178357825 . G . . LowGQX END=178357979 GT ./. chr2 178362366 . T . . LowGQX END=178362545 GT ./. chr2 178364295 . G . . LowGQX END=178364510 GT ./. chr2 178370183 . T . . LowGQX END=178370355 GT ./. chr2 178372647 . T . . LowGQX END=178372811 GT ./. chr2 178378496 . G . . LowGQX END=178378688 GT ./. chr2 178385946 . T . . LowGQX END=178386148 GT ./. chr2 178388425 . G . . LowGQX END=178388585 GT ./. chr2 178402751 . G . . LowGQX END=178402975 GT ./. chr2 178415492 . T . . LowGQX END=178417494 GT ./. chr2 178481430 . A . . LowGQX END=178483432 GT ./. chr2 178494084 . A . . LowGQX END=178494342 GT ./. chr2 178528543 . T . . LowGQX END=178528729 GT ./. chr2 178534170 . G . . LowGQX END=178534347 GT ./. chr2 178540132 . T . . LowGQX END=178540298 GT ./. chr2 178540324 . A . . LowGQX END=178540424 GT ./. chr2 178545503 . G . . LowGQX END=178545673 GT ./. chr2 178562009 . G . . LowGQX END=178562212 GT ./. chr2 178565798 . A . . LowGQX END=178565991 GT ./. chr2 178576446 . T . . LowGQX END=178576658 GT ./. chr2 178592335 . C . . LowGQX END=178592545 GT ./. chr2 178592703 . A . . LowGQX END=178592952 GT ./. chr2 178634000 . C . . LowGQX END=178634153 GT ./. chr2 178681505 . C . . LowGQX END=178681700 GT ./. chr2 178682534 . A . . LowGQX END=178682704 GT ./. chr2 178684896 . A . . LowGQX END=178685074 GT ./. chr2 178704927 . A . . LowGQX END=178705162 GT ./. chr2 178740535 . A . . LowGQX END=178740702 GT ./. chr2 178762734 . C . . LowGQX END=178762977 GT ./. chr2 178764258 . A . . LowGQX END=178764358 GT ./. chr2 178769774 . A . . LowGQX END=178769966 GT ./. chr2 178878978 . A . . LowGQX END=178879239 GT ./. chr2 178936202 . A . . LowGQX END=178937216 GT ./. chr2 178968978 . T . . LowGQX END=178969242 GT ./. chr2 178977272 . C . . LowGQX END=178977576 GT ./. chr2 178980987 . A . . LowGQX END=178981114 GT ./. chr2 178982780 . A . . LowGQX END=178982911 GT ./. chr2 178984952 . C . . LowGQX END=178985139 GT ./. chr2 178985905 . A . . LowGQX END=178986089 GT ./. chr2 178988247 . A . . LowGQX END=178988381 GT ./. chr2 178988548 . T . . LowGQX END=178988648 GT ./. chr2 178988852 . A . . LowGQX END=178989020 GT ./. chr2 178990416 . T . . LowGQX END=178990516 GT ./. chr2 178990709 . A . . LowGQX END=178990906 GT ./. chr2 179170910 . C . . LowGQX END=179171016 GT ./. chr2 179185001 . T . . LowGQX END=179185161 GT ./. chr2 179188901 . C . . LowGQX END=179189001 GT ./. chr2 179192981 . A . . LowGQX END=179193108 GT ./. chr2 179196256 . C . . LowGQX END=179196356 GT ./. chr2 179197366 . A . . LowGQX END=179197484 GT ./. chr2 179197596 . A . . LowGQX END=179197796 GT ./. chr2 179201026 . A . . LowGQX END=179201163 GT ./. chr2 179203716 . A . . LowGQX END=179203824 GT ./. chr2 179204396 . T . . LowGQX END=179204496 GT ./. chr2 179209001 . A . . LowGQX END=179209101 GT ./. chr2 179213909 . A . . LowGQX END=179214119 GT ./. chr2 179226407 . A . . LowGQX END=179226545 GT ./. chr2 179236851 . A . . LowGQX END=179236963 GT ./. chr2 179238615 . A . . LowGQX END=179238757 GT ./. chr2 179247145 . A . . LowGQX END=179247342 GT ./. chr2 179247749 . A . . LowGQX END=179248007 GT ./. chr2 179248764 . A . . LowGQX END=179248906 GT ./. chr2 179250167 . T . . LowGQX END=179250267 GT ./. chr2 179251778 . T . . LowGQX END=179251878 GT ./. chr2 179253734 . A . . LowGQX END=179253883 GT ./. chr2 179255758 . T . . LowGQX END=179255947 GT ./. chr2 179257137 . A . . LowGQX END=179257268 GT ./. chr2 179258988 . T . . LowGQX END=179259165 GT ./. chr2 179260176 . A . . LowGQX END=179260289 GT ./. chr2 179260452 . C . . LowGQX END=179260597 GT ./. chr2 179296773 . A . . LowGQX END=179297033 GT ./. chr2 179300821 . A . . LowGQX END=179301098 GT ./. chr2 179306286 . C . . LowGQX END=179306483 GT ./. chr2 179307943 . A . . LowGQX END=179308163 GT ./. chr2 179309098 . T . . LowGQX END=179309279 GT ./. chr2 179312181 . A . . LowGQX END=179312365 GT ./. chr2 179314918 . A . . LowGQX END=179315171 GT ./. chr2 179315582 . G . . LowGQX END=179315809 GT ./. chr2 179318086 . T . . LowGQX END=179318399 GT ./. chr2 179319008 . A . . LowGQX END=179319306 GT ./. chr2 179320686 . A . . LowGQX END=179320930 GT ./. chr2 179323186 . T . . LowGQX END=179323406 GT ./. chr2 179323873 . T . . LowGQX END=179323973 GT ./. chr2 179325024 . T . . LowGQX END=179325225 GT ./. chr2 179325658 . A . . LowGQX END=179326053 GT ./. chr2 179330495 . T . . LowGQX END=179330661 GT ./. chr2 179334337 . A . . LowGQX END=179334515 GT ./. chr2 179337714 . A . . LowGQX END=179337879 GT ./. chr2 179341785 . T . . LowGQX END=179341975 GT ./. chr2 179343004 . A . . LowGQX END=179343229 GT ./. chr2 179345507 . G . . LowGQX END=179345725 GT ./. chr2 179350366 . A . . LowGQX END=179350487 GT ./. chr2 179353658 . T . . LowGQX END=179353758 GT ./. chr2 179355384 . A . . LowGQX END=179355544 GT ./. chr2 179358578 . A . . LowGQX END=179358719 GT ./. chr2 179360191 . A . . LowGQX END=179360390 GT ./. chr2 179363910 . T . . LowGQX END=179364010 GT ./. chr2 179365786 . A . . LowGQX END=179365906 GT ./. chr2 179367032 . A . . LowGQX END=179367203 GT ./. chr2 179368485 . A . . LowGQX END=179368617 GT ./. chr2 179391738 . C . . LowGQX END=179392035 GT ./. chr2 179392172 . C . . LowGQX END=179392476 GT ./. chr2 179393000 . C . . LowGQX END=179393155 GT ./. chr2 179393254 . C . . LowGQX END=179393947 GT ./. chr2 179394666 . T . . LowGQX END=179394844 GT ./. chr2 179394967 . C . . LowGQX END=179400577 GT ./. chr2 179400708 . C . . LowGQX END=179401303 GT ./. chr2 179401664 . C . . LowGQX END=179401971 GT ./. chr2 179402068 . C . . LowGQX END=179402645 GT ./. chr2 179403266 . C . . LowGQX END=179403567 GT ./. chr2 179403672 . C . . LowGQX END=179403979 GT ./. chr2 179404108 . C . . LowGQX END=179404694 GT ./. chr2 179404794 . C . . LowGQX END=179405098 GT ./. chr2 179406008 . C . . LowGQX END=179406312 GT ./. chr2 179406990 . C . . LowGQX END=179407291 GT ./. chr2 179407388 . C . . LowGQX END=179407677 GT ./. chr2 179407795 . C . . LowGQX END=179408390 GT ./. chr2 179408560 . C . . LowGQX END=179408843 GT ./. chr2 179408927 . C . . LowGQX END=179409234 GT ./. chr2 179410114 . C . . LowGQX END=179410421 GT ./. chr2 179410546 . C . . LowGQX END=179410844 GT ./. chr2 179410938 . C . . LowGQX END=179411230 GT ./. chr2 179411326 . C . . LowGQX END=179411633 GT ./. chr2 179411729 . C . . LowGQX END=179412033 GT ./. chr2 179412133 . C . . LowGQX END=179414201 GT ./. chr2 179414296 . C . . LowGQX END=179414597 GT ./. chr2 179414712 . C . . LowGQX END=179415001 GT ./. chr2 179415683 . T . . LowGQX END=179415988 GT ./. chr2 179416356 . C . . LowGQX END=179418124 GT ./. chr2 179418228 . C . . LowGQX END=179418535 GT ./. chr2 179418640 . C . . LowGQX END=179418944 GT ./. chr2 179419179 . C . . LowGQX END=179419480 GT ./. chr2 179419581 . T . . LowGQX END=179419881 GT ./. chr2 179421564 . A . . LowGQX END=179421874 GT ./. chr2 179421979 . C . . LowGQX END=179422289 GT ./. chr2 179422364 . G . . LowGQX END=179422963 GT ./. chr2 179423067 . C . . LowGQX END=179423367 GT ./. chr2 179424037 . C . . LowGQX END=179441144 GT ./. chr2 179441245 . C . . LowGQX END=179441559 GT ./. chr2 179441649 . C . . LowGQX END=179442238 GT ./. chr2 179442328 . C . . LowGQX END=179442626 GT ./. chr2 179442714 . C . . LowGQX END=179442913 GT ./. chr2 179443300 . T . . LowGQX END=179443460 GT ./. chr2 179443532 . C . . LowGQX END=179444121 GT ./. chr2 179444287 . C . . LowGQX END=179444577 GT ./. chr2 179444665 . C . . LowGQX END=179444965 GT ./. chr2 179445038 . A . . LowGQX END=179445338 GT ./. chr2 179446225 . C . . LowGQX END=179446532 GT ./. chr2 179446632 . C . . LowGQX END=179446936 GT ./. chr2 179447022 . C . . LowGQX END=179447320 GT ./. chr2 179447666 . C . . LowGQX END=179447955 GT ./. chr2 179448333 . C . . LowGQX END=179448634 GT ./. chr2 179449002 . C . . LowGQX END=179449306 GT ./. chr2 179449385 . C . . LowGQX END=179449696 GT ./. chr2 179449798 . C . . LowGQX END=179450075 GT ./. chr2 179451231 . C . . LowGQX END=179451535 GT ./. chr2 179451834 . A . . LowGQX END=179452154 GT ./. chr2 179452242 . C . . LowGQX END=179452528 GT ./. chr2 179452625 . C . . LowGQX END=179452947 GT ./. chr2 179453264 . C . . LowGQX END=179456232 GT ./. chr2 179456315 . C . . LowGQX END=179456620 GT ./. chr2 179456704 . C . . LowGQX END=179457014 GT ./. chr2 179457095 . A . . LowGQX END=179457388 GT ./. chr2 179457501 . C . . LowGQX END=179457811 GT ./. chr2 179457889 . T . . LowGQX END=179458203 GT ./. chr2 179458284 . A . . LowGQX END=179458595 GT ./. chr2 179458677 . A . . LowGQX END=179458970 GT ./. chr2 179459070 . C . . LowGQX END=179459374 GT ./. chr2 179460223 . T . . LowGQX END=179460537 GT ./. chr2 179462254 . A . . LowGQX END=179462547 GT ./. chr2 179462624 . T . . LowGQX END=179462786 GT ./. chr2 179463192 . G . . LowGQX END=179463382 GT ./. chr2 179463474 . C . . LowGQX END=179463794 GT ./. chr2 179463862 . C . . LowGQX END=179464173 GT ./. chr2 179464270 . G . . LowGQX END=179464578 GT ./. chr2 179465478 . C . . LowGQX END=179465578 GT ./. chr2 179465580 . C . . LowGQX END=179465899 GT ./. chr2 179465991 . C . . LowGQX END=179466292 GT ./. chr2 179466384 . C . . LowGQX END=179466515 GT ./. chr2 179466595 . T . . LowGQX END=179466695 GT ./. chr2 179466728 . C . . LowGQX END=179466878 GT ./. chr2 179467008 . C . . LowGQX END=179467318 GT ./. chr2 179468602 . C . . LowGQX END=179469033 GT ./. chr2 179469424 . G . . LowGQX END=179469626 GT ./. chr2 179469713 . C . . LowGQX END=179470023 GT ./. chr2 179470140 . C . . LowGQX END=179470441 GT ./. chr2 179471747 . C . . LowGQX END=179472047 GT ./. chr2 179472117 . A . . LowGQX END=179472417 GT ./. chr2 179472511 . C . . LowGQX END=179472809 GT ./. chr2 179472904 . C . . LowGQX END=179473205 GT ./. chr2 179473322 . A . . LowGQX END=179473636 GT ./. chr2 179473934 . C . . LowGQX END=179474298 GT ./. chr2 179474410 . C . . LowGQX END=179474714 GT ./. chr2 179474806 . T . . LowGQX END=179475126 GT ./. chr2 179475709 . A . . LowGQX END=179475999 GT ./. chr2 179476098 . C . . LowGQX END=179476405 GT ./. chr2 179476484 . C . . LowGQX END=179476684 GT ./. chr2 179476767 . A . . LowGQX END=179476923 GT ./. chr2 179477003 . C . . LowGQX END=179477313 GT ./. chr2 179477499 . C . . LowGQX END=179477809 GT ./. chr2 179477856 . C . . LowGQX END=179478016 GT ./. chr2 179478477 . C . . LowGQX END=179478665 GT ./. chr2 179478768 . G . . LowGQX END=179479076 GT ./. chr2 179479192 . C . . LowGQX END=179479481 GT ./. chr2 179479573 . C . . LowGQX END=179479696 GT ./. chr2 179480003 . C . . LowGQX END=179480212 GT ./. chr2 179480337 . T . . LowGQX END=179480516 GT ./. chr2 179481195 . T . . LowGQX END=179481358 GT ./. chr2 179481455 . C . . LowGQX END=179481745 GT ./. chr2 179481786 . C . . LowGQX END=179481962 GT ./. chr2 179482051 . C . . LowGQX END=179482241 GT ./. chr2 179482495 . G . . LowGQX END=179482809 GT ./. chr2 179482905 . A . . LowGQX END=179483219 GT ./. chr2 179483300 . C . . LowGQX END=179483590 GT ./. chr2 179484337 . A . . LowGQX END=179484617 GT ./. chr2 179484714 . C . . LowGQX END=179484840 GT ./. chr2 179484943 . C . . LowGQX END=179485353 GT ./. chr2 179485431 . A . . LowGQX END=179485721 GT ./. chr2 179485818 . A . . LowGQX END=179486098 GT ./. chr2 179486201 . C . . LowGQX END=179486471 GT ./. chr2 179486556 . T . . LowGQX END=179486736 GT ./. chr2 179487366 . A . . LowGQX END=179487526 GT ./. chr2 179489181 . A . . LowGQX END=179489461 GT ./. chr2 179489939 . A . . LowGQX END=179490124 GT ./. chr2 179494027 . C . . LowGQX END=179494227 GT ./. chr2 179494917 . T . . LowGQX END=179495137 GT ./. chr2 179495530 . C . . LowGQX END=179495671 GT ./. chr2 179495750 . A . . LowGQX END=179496030 GT ./. chr2 179496873 . C . . LowGQX END=179497141 GT ./. chr2 179497242 . A . . LowGQX END=179497522 GT ./. chr2 179497644 . C . . LowGQX END=179497772 GT ./. chr2 179497893 . A . . LowGQX END=179498054 GT ./. chr2 179498129 . G . . LowGQX END=179498409 GT ./. chr2 179498533 . G . . LowGQX END=179498813 GT ./. chr2 179499092 . C . . LowGQX END=179499362 GT ./. chr2 179499399 . G . . LowGQX END=179499577 GT ./. chr2 179499861 . G . . LowGQX END=179500032 GT ./. chr2 179500156 . A . . LowGQX END=179500446 GT ./. chr2 179500689 . C . . LowGQX END=179500969 GT ./. chr2 179501124 . C . . LowGQX END=179501527 GT ./. chr2 179502031 . G . . LowGQX END=179502191 GT ./. chr2 179504321 . A . . LowGQX END=179504516 GT ./. chr2 179504716 . T . . LowGQX END=179504876 GT ./. chr2 179505193 . T . . LowGQX END=179505407 GT ./. chr2 179505885 . C . . LowGQX END=179506097 GT ./. chr2 179506912 . T . . LowGQX END=179507119 GT ./. chr2 179509239 . A . . LowGQX END=179509394 GT ./. chr2 179510612 . C . . LowGQX END=179510772 GT ./. chr2 179511199 . C . . LowGQX END=179511299 GT ./. chr2 179511781 . A . . LowGQX END=179511881 GT ./. chr2 179512100 . C . . LowGQX END=179512200 GT ./. chr2 179513913 . A . . LowGQX END=179514067 GT ./. chr2 179514270 . G . . LowGQX END=179514370 GT ./. chr2 179514513 . A . . LowGQX END=179514673 GT ./. chr2 179514855 . A . . LowGQX END=179515015 GT ./. chr2 179515477 . C . . LowGQX END=179515614 GT ./. chr2 179515969 . C . . LowGQX END=179516069 GT ./. chr2 179516179 . C . . LowGQX END=179516292 GT ./. chr2 179516345 . A . . LowGQX END=179516505 GT ./. chr2 179516610 . C . . LowGQX END=179516723 GT ./. chr2 179516775 . A . . LowGQX END=179516907 GT ./. chr2 179516990 . C . . LowGQX END=179517103 GT ./. chr2 179517184 . C . . LowGQX END=179517297 GT ./. chr2 179517355 . G . . LowGQX END=179517455 GT ./. chr2 179517544 . T . . LowGQX END=179517644 GT ./. chr2 179519464 . G . . LowGQX END=179519621 GT ./. chr2 179519631 . G . . LowGQX END=179519788 GT ./. chr2 179520259 . A . . LowGQX END=179520359 GT ./. chr2 179522621 . G . . LowGQX END=179522721 GT ./. chr2 179522742 . A . . LowGQX END=179522894 GT ./. chr2 179522937 . A . . LowGQX END=179523091 GT ./. chr2 179523133 . T . . LowGQX END=179523287 GT ./. chr2 179523427 . C . . LowGQX END=179523580 GT ./. chr2 179523684 . A . . LowGQX END=179524047 GT ./. chr2 179526424 . G . . LowGQX END=179526578 GT ./. chr2 179526613 . A . . LowGQX END=179526765 GT ./. chr2 179527198 . A . . LowGQX END=179527352 GT ./. chr2 179527394 . T . . LowGQX END=179527548 GT ./. chr2 179527658 . G . . LowGQX END=179527841 GT ./. chr2 179527985 . G . . LowGQX END=179528085 GT ./. chr2 179528152 . G . . LowGQX END=179528252 GT ./. chr2 179528346 . A . . LowGQX END=179528446 GT ./. chr2 179528538 . G . . LowGQX END=179528638 GT ./. chr2 179528734 . A . . LowGQX END=179528834 GT ./. chr2 179529166 . A . . LowGQX END=179529266 GT ./. chr2 179529373 . A . . LowGQX END=179529473 GT ./. chr2 179529566 . T . . LowGQX END=179529666 GT ./. chr2 179530096 . T . . LowGQX END=179530196 GT ./. chr2 179531540 . C . . LowGQX END=179531640 GT ./. chr2 179531955 . A . . LowGQX END=179532055 GT ./. chr2 179532161 . A . . LowGQX END=179532261 GT ./. chr2 179532357 . T . . LowGQX END=179532457 GT ./. chr2 179534027 . C . . LowGQX END=179534187 GT ./. chr2 179534311 . C . . LowGQX END=179534411 GT ./. chr2 179534914 . A . . LowGQX END=179535074 GT ./. chr2 179535767 . A . . LowGQX END=179535927 GT ./. chr2 179536687 . A . . LowGQX END=179537046 GT ./. chr2 179537091 . G . . LowGQX END=179537209 GT ./. chr2 179537296 . A . . LowGQX END=179537456 GT ./. chr2 179538339 . A . . LowGQX END=179538499 GT ./. chr2 179538999 . C . . LowGQX END=179539159 GT ./. chr2 179539743 . T . . LowGQX END=179539895 GT ./. chr2 179540585 . T . . LowGQX END=179540745 GT ./. chr2 179542347 . C . . LowGQX END=179542645 GT ./. chr2 179542804 . A . . LowGQX END=179542964 GT ./. chr2 179543103 . T . . LowGQX END=179543263 GT ./. chr2 179543426 . A . . LowGQX END=179543586 GT ./. chr2 179544015 . C . . LowGQX END=179544175 GT ./. chr2 179544278 . C . . LowGQX END=179544438 GT ./. chr2 179544610 . G . . LowGQX END=179544783 GT ./. chr2 179544930 . A . . LowGQX END=179545090 GT ./. chr2 179545772 . A . . LowGQX END=179545932 GT ./. chr2 179546070 . G . . LowGQX END=179546178 GT ./. chr2 179546337 . C . . LowGQX END=179546497 GT ./. chr2 179547423 . C . . LowGQX END=179547633 GT ./. chr2 179547876 . A . . LowGQX END=179548028 GT ./. chr2 179548725 . C . . LowGQX END=179548838 GT ./. chr2 179549056 . C . . LowGQX END=179549159 GT ./. chr2 179549392 . C . . LowGQX END=179549505 GT ./. chr2 179549632 . C . . LowGQX END=179549735 GT ./. chr2 179549979 . C . . LowGQX END=179550079 GT ./. chr2 179550244 . C . . LowGQX END=179550345 GT ./. chr2 179552837 . C . . LowGQX END=179552965 GT ./. chr2 179553385 . C . . LowGQX END=179553506 GT ./. chr2 179553732 . T . . LowGQX END=179553864 GT ./. chr2 179554016 . C . . LowGQX END=179554129 GT ./. chr2 179554212 . A . . LowGQX END=179554323 GT ./. chr2 179554539 . C . . LowGQX END=179554652 GT ./. chr2 179556742 . C . . LowGQX END=179556855 GT ./. chr2 179557126 . A . . LowGQX END=179557308 GT ./. chr2 179558335 . C . . LowGQX END=179558436 GT ./. chr2 179558632 . T . . LowGQX END=179558736 GT ./. chr2 179559295 . G . . LowGQX END=179559404 GT ./. chr2 179559515 . T . . LowGQX END=179559634 GT ./. chr2 179560066 . A . . LowGQX END=179560166 GT ./. chr2 179560591 . C . . LowGQX END=179560997 GT ./. chr2 179561780 . A . . LowGQX END=179561942 GT ./. chr2 179563499 . C . . LowGQX END=179563656 GT ./. chr2 179565809 . A . . LowGQX END=179565931 GT ./. chr2 179566254 . C . . LowGQX END=179566355 GT ./. chr2 179566710 . T . . LowGQX END=179566810 GT ./. chr2 179566894 . C . . LowGQX END=179567004 GT ./. chr2 179567180 . C . . LowGQX END=179567391 GT ./. chr2 179568873 . C . . LowGQX END=179569135 GT ./. chr2 179569236 . C . . LowGQX END=179569505 GT ./. chr2 179569599 . T . . LowGQX END=179569699 GT ./. chr2 179569900 . C . . LowGQX END=179570085 GT ./. chr2 179571180 . C . . LowGQX END=179571467 GT ./. chr2 179571555 . A . . LowGQX END=179571682 GT ./. chr2 179572252 . C . . LowGQX END=179572541 GT ./. chr2 179574292 . C . . LowGQX END=179574584 GT ./. chr2 179575361 . C . . LowGQX END=179575650 GT ./. chr2 179575788 . C . . LowGQX END=179576077 GT ./. chr2 179576670 . C . . LowGQX END=179576950 GT ./. chr2 179577041 . C . . LowGQX END=179577321 GT ./. chr2 179577423 . C . . LowGQX END=179577703 GT ./. chr2 179577811 . C . . LowGQX END=179578100 GT ./. chr2 179578623 . C . . LowGQX END=179578903 GT ./. chr2 179579018 . C . . LowGQX END=179579301 GT ./. chr2 179579712 . C . . LowGQX END=179579992 GT ./. chr2 179580219 . C . . LowGQX END=179580502 GT ./. chr2 179581821 . C . . LowGQX END=179582110 GT ./. chr2 179582249 . C . . LowGQX END=179582538 GT ./. chr2 179582669 . C . . LowGQX END=179582949 GT ./. chr2 179583048 . C . . LowGQX END=179583328 GT ./. chr2 179583421 . C . . LowGQX END=179583701 GT ./. chr2 179583890 . C . . LowGQX END=179584179 GT ./. chr2 179584280 . C . . LowGQX END=179584560 GT ./. chr2 179584709 . C . . LowGQX END=179584992 GT ./. chr2 179585111 . C . . LowGQX END=179585391 GT ./. chr2 179585647 . C . . LowGQX END=179585930 GT ./. chr2 179586573 . C . . LowGQX END=179586862 GT ./. chr2 179586985 . C . . LowGQX END=179587274 GT ./. chr2 179587385 . C . . LowGQX END=179587665 GT ./. chr2 179587772 . C . . LowGQX END=179588052 GT ./. chr2 179588144 . C . . LowGQX END=179588424 GT ./. chr2 179588582 . C . . LowGQX END=179588871 GT ./. chr2 179588986 . C . . LowGQX END=179589266 GT ./. chr2 179590094 . C . . LowGQX END=179590377 GT ./. chr2 179590494 . C . . LowGQX END=179590774 GT ./. chr2 179591816 . C . . LowGQX END=179592099 GT ./. chr2 179592311 . C . . LowGQX END=179592591 GT ./. chr2 179592836 . C . . LowGQX END=179593125 GT ./. chr2 179593226 . C . . LowGQX END=179593506 GT ./. chr2 179593617 . C . . LowGQX END=179593897 GT ./. chr2 179594014 . C . . LowGQX END=179594294 GT ./. chr2 179594380 . C . . LowGQX END=179594680 GT ./. chr2 179594819 . C . . LowGQX END=179595099 GT ./. chr2 179595231 . C . . LowGQX END=179595520 GT ./. chr2 179595651 . C . . LowGQX END=179595931 GT ./. chr2 179596031 . C . . LowGQX END=179596311 GT ./. chr2 179596419 . C . . LowGQX END=179596699 GT ./. chr2 179596792 . C . . LowGQX END=179597075 GT ./. chr2 179597166 . C . . LowGQX END=179597446 GT ./. chr2 179597560 . C . . LowGQX END=179597849 GT ./. chr2 179597965 . C . . LowGQX END=179598245 GT ./. chr2 179598340 . C . . LowGQX END=179598620 GT ./. chr2 179599054 . C . . LowGQX END=179599334 GT ./. chr2 179599433 . C . . LowGQX END=179599716 GT ./. chr2 179600237 . C . . LowGQX END=179600802 GT ./. chr2 179602808 . C . . LowGQX END=179603088 GT ./. chr2 179603867 . C . . LowGQX END=179606649 GT ./. chr2 179610261 . A . . LowGQX END=179616818 GT ./. chr2 179617800 . T . . LowGQX END=179617959 GT ./. chr2 179620948 . C . . LowGQX END=179621525 GT ./. chr2 179622268 . C . . LowGQX END=179622644 GT ./. chr2 179623660 . T . . LowGQX END=179623951 GT ./. chr2 179628853 . A . . LowGQX END=179629081 GT ./. chr2 179629203 . A . . LowGQX END=179629590 GT ./. chr2 179631057 . G . . LowGQX END=179631381 GT ./. chr2 179632435 . A . . LowGQX END=179632934 GT ./. chr2 179633349 . T . . LowGQX END=179633712 GT ./. chr2 179634355 . T . . LowGQX END=179634718 GT ./. chr2 179634736 . A . . LowGQX END=179635454 GT ./. chr2 179635484 . C . . LowGQX END=179635584 GT ./. chr2 179635887 . A . . LowGQX END=179636250 GT ./. chr2 179637785 . T . . LowGQX END=179638504 GT ./. chr2 179638514 . T . . LowGQX END=179639252 GT ./. chr2 179639597 . A . . LowGQX END=179639981 GT ./. chr2 179640032 . A . . LowGQX END=179642363 GT ./. chr2 179642380 . A . . LowGQX END=179642754 GT ./. chr2 179643550 . G . . LowGQX END=179643897 GT ./. chr2 179643905 . A . . LowGQX END=179644241 GT ./. chr2 179644676 . G . . LowGQX END=179644984 GT ./. chr2 179645797 . T . . LowGQX END=179646042 GT ./. chr2 179646888 . T . . LowGQX END=179647206 GT ./. chr2 179647215 . C . . LowGQX END=179647381 GT ./. chr2 179647482 . A . . LowGQX END=179647843 GT ./. chr2 179648396 . T . . LowGQX END=179648564 GT ./. chr2 179648746 . G . . LowGQX END=179649130 GT ./. chr2 179650296 . A . . LowGQX END=179650521 GT ./. chr2 179650524 . G . . LowGQX END=179650920 GT ./. chr2 179654036 . G . . LowGQX END=179654276 GT ./. chr2 179654654 . T . . LowGQX END=179654894 GT ./. chr2 179655384 . T . . LowGQX END=179655624 GT ./. chr2 179656748 . G . . LowGQX END=179656976 GT ./. chr2 179658080 . G . . LowGQX END=179658320 GT ./. chr2 179659075 . T . . LowGQX END=179659330 GT ./. chr2 179659598 . T . . LowGQX END=179660031 GT ./. chr2 179664162 . A . . LowGQX END=179664689 GT ./. chr2 179665071 . C . . LowGQX END=179665461 GT ./. chr2 179666814 . T . . LowGQX END=179667120 GT ./. chr2 179669228 . T . . LowGQX END=179669426 GT ./. chr2 179682219 . C . . LowGQX END=179682319 GT ./. chr2 179698899 . G . . LowGQX END=179699168 GT ./. chr2 179701591 . A . . LowGQX END=179702474 GT ./. chr2 179710351 . A . . LowGQX END=179710521 GT ./. chr2 179714774 . A . . LowGQX END=179714934 GT ./. chr2 179718156 . A . . LowGQX END=179718354 GT ./. chr2 179720062 . A . . LowGQX END=179720271 GT ./. chr2 179720982 . A . . LowGQX END=179721127 GT ./. chr2 179730492 . A . . LowGQX END=179730646 GT ./. chr2 179732751 . A . . LowGQX END=179732935 GT ./. chr2 179733842 . A . . LowGQX END=179734035 GT ./. chr2 179736152 . A . . LowGQX END=179736282 GT ./. chr2 179736858 . A . . LowGQX END=179737042 GT ./. chr2 179742560 . G . . LowGQX END=179742890 GT ./. chr2 179749627 . C . . LowGQX END=179749820 GT ./. chr2 179751428 . A . . LowGQX END=179751599 GT ./. chr2 179753253 . C . . LowGQX END=179753396 GT ./. chr2 179770055 . C . . LowGQX END=179770229 GT ./. chr2 179783439 . C . . LowGQX END=179783635 GT ./. chr2 179809261 . C . . LowGQX END=179809379 GT ./. chr2 179825956 . C . . LowGQX END=179826211 GT ./. chr2 179839783 . C . . LowGQX END=179839893 GT ./. chr2 179843210 . C . . LowGQX END=179843403 GT ./. chr2 179912010 . C . . LowGQX END=179912134 GT ./. chr2 179914566 . C . . LowGQX END=179914669 GT ./. chr2 179974624 . T . . LowGQX END=179974758 GT ./. chr2 179977449 . A . . LowGQX END=179977575 GT ./. chr2 179979780 . A . . LowGQX END=179979986 GT ./. chr2 179981301 . C . . LowGQX END=179981520 GT ./. chr2 179982197 . A . . LowGQX END=179982350 GT ./. chr2 179986495 . G . . LowGQX END=179986659 GT ./. chr2 179988440 . A . . LowGQX END=179988559 GT ./. chr2 179989089 . A . . LowGQX END=179989288 GT ./. chr2 179997029 . A . . LowGQX END=179997199 GT ./. chr2 180008317 . A . . LowGQX END=180008533 GT ./. chr2 180011047 . T . . LowGQX END=180011207 GT ./. chr2 180013972 . C . . LowGQX END=180014124 GT ./. chr2 180016003 . A . . LowGQX END=180016121 GT ./. chr2 180036845 . A . . LowGQX END=180036963 GT ./. chr2 180039124 . T . . LowGQX END=180039224 GT ./. chr2 180041171 . T . . LowGQX END=180041271 GT ./. chr2 180047805 . A . . LowGQX END=180047918 GT ./. chr2 180056432 . A . . LowGQX END=180056592 GT ./. chr2 180307904 . T . . LowGQX END=180308254 GT ./. chr2 180309601 . A . . LowGQX END=180309707 GT ./. chr2 180310275 . A . . LowGQX END=180310458 GT ./. chr2 180311250 . A . . LowGQX END=180311500 GT ./. chr2 180347997 . A . . LowGQX END=180348164 GT ./. chr2 180383203 . C . . LowGQX END=180383368 GT ./. chr2 180387579 . C . . LowGQX END=180387679 GT ./. chr2 180409552 . A . . LowGQX END=180409699 GT ./. chr2 180448656 . A . . LowGQX END=180448756 GT ./. chr2 180610402 . A . . LowGQX END=180610502 GT ./. chr2 180634228 . A . . LowGQX END=180634485 GT ./. chr2 180725490 . A . . LowGQX END=180725650 GT ./. chr2 180809855 . A . . LowGQX END=180810443 GT ./. chr2 180815238 . C . . LowGQX END=180815460 GT ./. chr2 180815551 . C . . LowGQX END=180815654 GT ./. chr2 180817197 . C . . LowGQX END=180817326 GT ./. chr2 180818931 . C . . LowGQX END=180819085 GT ./. chr2 180819673 . C . . LowGQX END=180819773 GT ./. chr2 180823729 . T . . LowGQX END=180823829 GT ./. chr2 180829265 . A . . LowGQX END=180829365 GT ./. chr2 180830604 . C . . LowGQX END=180830710 GT ./. chr2 180835209 . T . . LowGQX END=180835309 GT ./. chr2 180835376 . C . . LowGQX END=180835584 GT ./. chr2 180835667 . C . . LowGQX END=180835804 GT ./. chr2 180837897 . A . . LowGQX END=180837997 GT ./. chr2 180838360 . C . . LowGQX END=180838534 GT ./. chr2 180842916 . C . . LowGQX END=180843046 GT ./. chr2 180846478 . C . . LowGQX END=180846725 GT ./. chr2 180851421 . C . . LowGQX END=180851533 GT ./. chr2 180853233 . A . . LowGQX END=180853388 GT ./. chr2 180858005 . A . . LowGQX END=180858105 GT ./. chr2 181846768 . A . . LowGQX END=181846966 GT ./. chr2 181848746 . T . . LowGQX END=181848846 GT ./. chr2 181852043 . T . . LowGQX END=181852143 GT ./. chr2 181854604 . T . . LowGQX END=181854704 GT ./. chr2 181922418 . A . . LowGQX END=181922555 GT ./. chr2 181925390 . A . . LowGQX END=181925542 GT ./. chr2 181927516 . A . . LowGQX END=181927618 GT ./. chr2 182322370 . C . . LowGQX END=182322581 GT ./. chr2 182322921 . A . . LowGQX END=182323047 GT ./. chr2 182339685 . A . . LowGQX END=182339796 GT ./. chr2 182339884 . A . . LowGQX END=182340018 GT ./. chr2 182340513 . G . . LowGQX END=182340613 GT ./. chr2 182343412 . G . . LowGQX END=182343568 GT ./. chr2 182344802 . T . . LowGQX END=182344996 GT ./. chr2 182346318 . C . . LowGQX END=182346418 GT ./. chr2 182347069 . T . . LowGQX END=182347169 GT ./. chr2 182347239 . A . . LowGQX END=182347381 GT ./. chr2 182350556 . A . . LowGQX END=182350728 GT ./. chr2 182358050 . A . . LowGQX END=182358150 GT ./. chr2 182359445 . T . . LowGQX END=182359545 GT ./. chr2 182360071 . T . . LowGQX END=182360171 GT ./. chr2 182360508 . A . . LowGQX END=182360667 GT ./. chr2 182363348 . A . . LowGQX END=182363507 GT ./. chr2 182374383 . A . . LowGQX END=182374537 GT ./. chr2 182374561 . T . . LowGQX END=182374661 GT ./. chr2 182376415 . T . . LowGQX END=182376515 GT ./. chr2 182386916 . A . . LowGQX END=182387071 GT ./. chr2 182388162 . A . . LowGQX END=182388262 GT ./. chr2 182388836 . C . . LowGQX END=182388988 GT ./. chr2 182389924 . T . . LowGQX END=182390024 GT ./. chr2 182392022 . A . . LowGQX END=182392169 GT ./. chr2 182394266 . A . . LowGQX END=182394378 GT ./. chr2 182395249 . A . . LowGQX END=182395379 GT ./. chr2 182396332 . A . . LowGQX END=182396506 GT ./. chr2 182398997 . A . . LowGQX END=182399100 GT ./. chr2 182399491 . A . . LowGQX END=182399665 GT ./. chr2 182400157 . A . . LowGQX END=182400257 GT ./. chr2 182401400 . T . . LowGQX END=182403023 GT ./. chr2 182403768 . T . . LowGQX END=182404043 GT ./. chr2 182409376 . T . . LowGQX END=182409575 GT ./. chr2 182412294 . A . . LowGQX END=182412626 GT ./. chr2 182413220 . T . . LowGQX END=182413636 GT ./. chr2 182414306 . T . . LowGQX END=182414487 GT ./. chr2 182423242 . A . . LowGQX END=182423487 GT ./. chr2 182430109 . A . . LowGQX END=182430289 GT ./. chr2 182430734 . G . . LowGQX END=182430900 GT ./. chr2 182438429 . G . . LowGQX END=182438663 GT ./. chr2 182467780 . G . . LowGQX END=182467880 GT ./. chr2 182468427 . T . . LowGQX END=182468858 GT ./. chr2 182521385 . G . . LowGQX END=182521842 GT ./. chr2 182542466 . A . . LowGQX END=182543639 GT ./. chr2 182756792 . C . . LowGQX END=182757007 GT ./. chr2 182757316 . G . . LowGQX END=182757416 GT ./. chr2 182760732 . G . . LowGQX END=182760832 GT ./. chr2 182761614 . G . . LowGQX END=182761714 GT ./. chr2 182763577 . G . . LowGQX END=182763677 GT ./. chr2 182763739 . A . . LowGQX END=182763842 GT ./. chr2 182765421 . A . . LowGQX END=182765634 GT ./. chr2 182766491 . A . . LowGQX END=182767196 GT ./. chr2 182774613 . A . . LowGQX END=182774713 GT ./. chr2 182775300 . A . . LowGQX END=182775400 GT ./. chr2 182778567 . C . . LowGQX END=182778720 GT ./. chr2 182779941 . A . . LowGQX END=182781157 GT ./. chr2 182783314 . C . . LowGQX END=182783414 GT ./. chr2 182783480 . A . . LowGQX END=182783612 GT ./. chr2 182784000 . T . . LowGQX END=182784176 GT ./. chr2 182785307 . T . . LowGQX END=182785407 GT ./. chr2 182786673 . A . . LowGQX END=182787142 GT ./. chr2 182792887 . G . . LowGQX END=182792993 GT ./. chr2 182794286 . A . . LowGQX END=182794386 GT ./. chr2 182850828 . C . . LowGQX END=182850928 GT ./. chr2 182852484 . T . . LowGQX END=182852636 GT ./. chr2 182926078 . T . . LowGQX END=182926238 GT ./. chr2 182928438 . T . . LowGQX END=182928538 GT ./. chr2 182981873 . A . . LowGQX END=182982028 GT ./. chr2 183011793 . A . . LowGQX END=183011893 GT ./. chr2 183032946 . C . . LowGQX END=183033046 GT ./. chr2 183050523 . T . . LowGQX END=183050809 GT ./. chr2 183051143 . G . . LowGQX END=183051318 GT ./. chr2 183053697 . C . . LowGQX END=183053797 GT ./. chr2 183066164 . A . . LowGQX END=183066289 GT ./. chr2 183066413 . A . . LowGQX END=183066519 GT ./. chr2 183070665 . A . . LowGQX END=183070795 GT ./. chr2 183088529 . G . . LowGQX END=183088748 GT ./. chr2 183094731 . A . . LowGQX END=183094876 GT ./. chr2 183095740 . A . . LowGQX END=183095861 GT ./. chr2 183099087 . T . . LowGQX END=183099243 GT ./. chr2 183104835 . A . . LowGQX END=183105022 GT ./. chr2 183106528 . C . . LowGQX END=183106642 GT ./. chr2 183129026 . A . . LowGQX END=183129144 GT ./. chr2 183291281 . C . . LowGQX END=183291381 GT ./. chr2 183387001 . A . . LowGQX END=183387106 GT ./. chr2 183582812 . G . . LowGQX END=183583020 GT ./. chr2 183584732 . A . . LowGQX END=183584922 GT ./. chr2 183586728 . A . . LowGQX END=183586880 GT ./. chr2 183593295 . A . . LowGQX END=183593395 GT ./. chr2 183593588 . A . . LowGQX END=183593724 GT ./. chr2 183594572 . T . . LowGQX END=183594672 GT ./. chr2 183595215 . A . . LowGQX END=183595315 GT ./. chr2 183595746 . T . . LowGQX END=183595846 GT ./. chr2 183597134 . T . . LowGQX END=183597298 GT ./. chr2 183600934 . C . . LowGQX END=183601116 GT ./. chr2 183604228 . A . . LowGQX END=183604328 GT ./. chr2 183605021 . T . . LowGQX END=183605174 GT ./. chr2 183605908 . T . . LowGQX END=183606086 GT ./. chr2 183608273 . A . . LowGQX END=183608442 GT ./. chr2 183616383 . A . . LowGQX END=183616515 GT ./. chr2 183616797 . A . . LowGQX END=183616918 GT ./. chr2 183619728 . A . . LowGQX END=183619834 GT ./. chr2 183621039 . A . . LowGQX END=183621199 GT ./. chr2 183622417 . A . . LowGQX END=183622555 GT ./. chr2 183623541 . A . . LowGQX END=183623641 GT ./. chr2 183623885 . A . . LowGQX END=183624075 GT ./. chr2 183627407 . A . . LowGQX END=183627531 GT ./. chr2 183640041 . A . . LowGQX END=183640150 GT ./. chr2 183641804 . T . . LowGQX END=183641904 GT ./. chr2 183653488 . C . . LowGQX END=183653588 GT ./. chr2 183699574 . A . . LowGQX END=183699695 GT ./. chr2 183702658 . C . . LowGQX END=183702758 GT ./. chr2 183703135 . A . . LowGQX END=183703344 GT ./. chr2 183707189 . C . . LowGQX END=183707289 GT ./. chr2 183723488 . A . . LowGQX END=183723588 GT ./. chr2 183730801 . A . . LowGQX END=183731283 GT ./. chr2 183790428 . T . . LowGQX END=183790549 GT ./. chr2 183791539 . C . . LowGQX END=183791692 GT ./. chr2 183792843 . A . . LowGQX END=183792957 GT ./. chr2 183793509 . A . . LowGQX END=183793630 GT ./. chr2 183795420 . T . . LowGQX END=183795520 GT ./. chr2 183799418 . A . . LowGQX END=183799571 GT ./. chr2 183799959 . A . . LowGQX END=183800113 GT ./. chr2 183806795 . C . . LowGQX END=183806895 GT ./. chr2 183817131 . A . . LowGQX END=183817233 GT ./. chr2 183817519 . A . . LowGQX END=183817654 GT ./. chr2 183817839 . A . . LowGQX END=183818062 GT ./. chr2 183821148 . T . . LowGQX END=183821324 GT ./. chr2 183822183 . A . . LowGQX END=183822327 GT ./. chr2 183826885 . A . . LowGQX END=183827009 GT ./. chr2 183829402 . A . . LowGQX END=183829539 GT ./. chr2 183831942 . A . . LowGQX END=183832132 GT ./. chr2 183841601 . C . . LowGQX END=183841701 GT ./. chr2 183843553 . G . . LowGQX END=183843653 GT ./. chr2 183845970 . A . . LowGQX END=183846107 GT ./. chr2 183847547 . A . . LowGQX END=183847658 GT ./. chr2 183848012 . A . . LowGQX END=183848113 GT ./. chr2 183850827 . T . . LowGQX END=183850978 GT ./. chr2 183853756 . A . . LowGQX END=183853917 GT ./. chr2 183859542 . C . . LowGQX END=183859642 GT ./. chr2 183860427 . A . . LowGQX END=183860569 GT ./. chr2 183866677 . T . . LowGQX END=183866777 GT ./. chr2 183866853 . A . . LowGQX END=183867000 GT ./. chr2 183867681 . T . . LowGQX END=183867781 GT ./. chr2 183867958 . T . . LowGQX END=183868109 GT ./. chr2 183888532 . A . . LowGQX END=183888647 GT ./. chr2 183889665 . G . . LowGQX END=183889765 GT ./. chr2 183902664 . C . . LowGQX END=183902830 GT ./. chr2 183943660 . T . . LowGQX END=183943890 GT ./. chr2 183948210 . A . . LowGQX END=183948310 GT ./. chr2 183951736 . T . . LowGQX END=183951923 GT ./. chr2 183960157 . A . . LowGQX END=183960389 GT ./. chr2 183989156 . G . . LowGQX END=183989256 GT ./. chr2 183993013 . A . . LowGQX END=183993188 GT ./. chr2 183995144 . A . . LowGQX END=183995276 GT ./. chr2 183995708 . T . . LowGQX END=183995808 GT ./. chr2 183998222 . A . . LowGQX END=183998373 GT ./. chr2 184016234 . A . . LowGQX END=184016380 GT ./. chr2 184022100 . T . . LowGQX END=184022257 GT ./. chr2 184023009 . A . . LowGQX END=184023142 GT ./. chr2 184024214 . A . . LowGQX END=184024404 GT ./. chr2 184025771 . T . . LowGQX END=184025871 GT ./. chr2 185463685 . C . . LowGQX END=185463800 GT ./. chr2 185731063 . A . . LowGQX END=185731242 GT ./. chr2 185798328 . A . . LowGQX END=185798508 GT ./. chr2 185800508 . A . . LowGQX END=185803756 GT ./. chr2 186603343 . T . . LowGQX END=186603723 GT ./. chr2 186604072 . G . . LowGQX END=186604199 GT ./. chr2 186607859 . G . . LowGQX END=186608022 GT ./. chr2 186609044 . T . . LowGQX END=186609144 GT ./. chr2 186610155 . G . . LowGQX END=186610296 GT ./. chr2 186611395 . G . . LowGQX END=186611538 GT ./. chr2 186612039 . G . . LowGQX END=186612151 GT ./. chr2 186618448 . G . . LowGQX END=186618576 GT ./. chr2 186620912 . C . . LowGQX END=186621012 GT ./. chr2 186625714 . G . . LowGQX END=186625831 GT ./. chr2 186626672 . T . . LowGQX END=186626772 GT ./. chr2 186627909 . G . . LowGQX END=186628017 GT ./. chr2 186629211 . C . . LowGQX END=186629311 GT ./. chr2 186647411 . T . . LowGQX END=186647511 GT ./. chr2 186650947 . G . . LowGQX END=186651047 GT ./. chr2 186653369 . G . . LowGQX END=186662258 GT ./. chr2 186662368 . A . . LowGQX END=186662468 GT ./. chr2 186664423 . G . . LowGQX END=186673863 GT ./. chr2 186678270 . A . . LowGQX END=186678772 GT ./. chr2 186680046 . A . . LowGQX END=186680201 GT ./. chr2 186689079 . G . . LowGQX END=186689235 GT ./. chr2 186692855 . T . . LowGQX END=186692955 GT ./. chr2 186696525 . A . . LowGQX END=186696625 GT ./. chr2 186697775 . C . . LowGQX END=186697956 GT ./. chr2 187351098 . T . . LowGQX END=187351198 GT ./. chr2 187359908 . T . . LowGQX END=187360064 GT ./. chr2 187361799 . C . . LowGQX END=187361899 GT ./. chr2 187364258 . G . . LowGQX END=187364418 GT ./. chr2 187364907 . A . . LowGQX END=187365023 GT ./. chr2 187365314 . A . . LowGQX END=187365414 GT ./. chr2 187365998 . A . . LowGQX END=187366155 GT ./. chr2 187367219 . T . . LowGQX END=187367319 GT ./. chr2 187368757 . A . . LowGQX END=187368944 GT ./. chr2 187370176 . A . . LowGQX END=187370327 GT ./. chr2 187370465 . A . . LowGQX END=187370707 GT ./. chr2 187371438 . A . . LowGQX END=187371566 GT ./. chr2 187372112 . T . . LowGQX END=187372212 GT ./. chr2 187373268 . A . . LowGQX END=187373463 GT ./. chr2 187373724 . A . . LowGQX END=187373824 GT ./. chr2 187455064 . C . . LowGQX END=187455253 GT ./. chr2 187465035 . C . . LowGQX END=187465135 GT ./. chr2 187466746 . A . . LowGQX END=187466881 GT ./. chr2 187487062 . T . . LowGQX END=187487162 GT ./. chr2 187490198 . A . . LowGQX END=187490317 GT ./. chr2 187495505 . T . . LowGQX END=187495605 GT ./. chr2 187498029 . A . . LowGQX END=187498129 GT ./. chr2 187500807 . A . . LowGQX END=187500937 GT ./. chr2 187501765 . G . . LowGQX END=187501865 GT ./. chr2 187502976 . G . . LowGQX END=187503076 GT ./. chr2 187503115 . A . . LowGQX END=187503215 GT ./. chr2 187505619 . T . . LowGQX END=187505770 GT ./. chr2 187506111 . A . . LowGQX END=187506318 GT ./. chr2 187511411 . A . . LowGQX END=187511607 GT ./. chr2 187514485 . A . . LowGQX END=187514640 GT ./. chr2 187516707 . A . . LowGQX END=187516819 GT ./. chr2 187519357 . T . . LowGQX END=187519457 GT ./. chr2 187520942 . T . . LowGQX END=187521131 GT ./. chr2 187523763 . A . . LowGQX END=187523905 GT ./. chr2 187528479 . A . . LowGQX END=187528579 GT ./. chr2 187529219 . A . . LowGQX END=187529371 GT ./. chr2 187529850 . A . . LowGQX END=187529950 GT ./. chr2 187531421 . T . . LowGQX END=187531521 GT ./. chr2 187531868 . C . . LowGQX END=187531968 GT ./. chr2 187532396 . A . . LowGQX END=187532506 GT ./. chr2 187533457 . A . . LowGQX END=187533650 GT ./. chr2 187534426 . A . . LowGQX END=187534586 GT ./. chr2 187540329 . A . . LowGQX END=187540447 GT ./. chr2 187540545 . A . . LowGQX END=187540682 GT ./. chr2 187541538 . A . . LowGQX END=187541665 GT ./. chr2 187541922 . A . . LowGQX END=187542022 GT ./. chr2 187543418 . A . . LowGQX END=187543518 GT ./. chr2 187558899 . C . . LowGQX END=187559141 GT ./. chr2 187604953 . A . . LowGQX END=187605191 GT ./. chr2 187608207 . C . . LowGQX END=187608307 GT ./. chr2 187611817 . A . . LowGQX END=187611980 GT ./. chr2 187615859 . A . . LowGQX END=187616034 GT ./. chr2 187618617 . T . . LowGQX END=187618779 GT ./. chr2 187625838 . A . . LowGQX END=187626008 GT ./. chr2 187626204 . A . . LowGQX END=187627553 GT ./. chr2 187692709 . T . . LowGQX END=187693520 GT ./. chr2 187694452 . A . . LowGQX END=187694642 GT ./. chr2 187697845 . A . . LowGQX END=187698005 GT ./. chr2 187698666 . A . . LowGQX END=187698766 GT ./. chr2 187702031 . A . . LowGQX END=187702284 GT ./. chr2 187703684 . A . . LowGQX END=187703899 GT ./. chr2 187709362 . T . . LowGQX END=187709515 GT ./. chr2 187712435 . A . . LowGQX END=187712535 GT ./. chr2 187713615 . C . . LowGQX END=187713860 GT ./. chr2 188210909 . T . . LowGQX END=188211129 GT ./. chr2 188216618 . A . . LowGQX END=188216718 GT ./. chr2 188216839 . A . . LowGQX END=188217062 GT ./. chr2 188223774 . A . . LowGQX END=188223874 GT ./. chr2 188223920 . T . . LowGQX END=188224020 GT ./. chr2 188225323 . A . . LowGQX END=188225481 GT ./. chr2 188228101 . A . . LowGQX END=188228232 GT ./. chr2 188243663 . T . . LowGQX END=188243763 GT ./. chr2 188245192 . A . . LowGQX END=188245309 GT ./. chr2 188245402 . A . . LowGQX END=188245517 GT ./. chr2 188247858 . A . . LowGQX END=188248035 GT ./. chr2 188250248 . A . . LowGQX END=188250400 GT ./. chr2 188331607 . T . . LowGQX END=188331831 GT ./. chr2 188332478 . A . . LowGQX END=188332662 GT ./. chr2 188343401 . T . . LowGQX END=188343533 GT ./. chr2 188348789 . T . . LowGQX END=188348948 GT ./. chr2 188349516 . A . . LowGQX END=188349717 GT ./. chr2 188352982 . A . . LowGQX END=188353134 GT ./. chr2 188361606 . A . . LowGQX END=188361808 GT ./. chr2 188368373 . A . . LowGQX END=188368498 GT ./. chr2 189162158 . T . . LowGQX END=189162369 GT ./. chr2 189342338 . C . . LowGQX END=189342494 GT ./. chr2 189348139 . T . . LowGQX END=189348239 GT ./. chr2 189387469 . A . . LowGQX END=189387569 GT ./. chr2 189393772 . C . . LowGQX END=189393925 GT ./. chr2 189405906 . A . . LowGQX END=189406151 GT ./. chr2 189433964 . A . . LowGQX END=189434144 GT ./. chr2 189434752 . T . . LowGQX END=189434903 GT ./. chr2 189447068 . C . . LowGQX END=189447293 GT ./. chr2 189448990 . A . . LowGQX END=189449133 GT ./. chr2 189452580 . A . . LowGQX END=189452803 GT ./. chr2 189454422 . T . . LowGQX END=189454522 GT ./. chr2 189458653 . A . . LowGQX END=189458753 GT ./. chr2 189599331 . A . . LowGQX END=189599650 GT ./. chr2 189839165 . G . . LowGQX END=189839346 GT ./. chr2 189842743 . A . . LowGQX END=189842903 GT ./. chr2 189849435 . A . . LowGQX END=189849740 GT ./. chr2 189849868 . T . . LowGQX END=189850025 GT ./. chr2 189850340 . G . . LowGQX END=189850556 GT ./. chr2 189851734 . A . . LowGQX END=189851917 GT ./. chr2 189852744 . A . . LowGQX END=189852912 GT ./. chr2 189853263 . A . . LowGQX END=189853421 GT ./. chr2 189854071 . T . . LowGQX END=189854227 GT ./. chr2 189854759 . T . . LowGQX END=189854927 GT ./. chr2 189854982 . T . . LowGQX END=189855138 GT ./. chr2 189855657 . C . . LowGQX END=189855835 GT ./. chr2 189856162 . A . . LowGQX END=189856309 GT ./. chr2 189856332 . A . . LowGQX END=189856500 GT ./. chr2 189856842 . G . . LowGQX END=189857006 GT ./. chr2 189857550 . A . . LowGQX END=189857718 GT ./. chr2 189858036 . A . . LowGQX END=189858237 GT ./. chr2 189858713 . A . . LowGQX END=189858860 GT ./. chr2 189858909 . A . . LowGQX END=189859110 GT ./. chr2 189859204 . A . . LowGQX END=189859372 GT ./. chr2 189859399 . A . . LowGQX END=189859609 GT ./. chr2 189859709 . C . . LowGQX END=189859877 GT ./. chr2 189860367 . T . . LowGQX END=189860568 GT ./. chr2 189860788 . T . . LowGQX END=189860956 GT ./. chr2 189861073 . C . . LowGQX END=189861274 GT ./. chr2 189861828 . G . . LowGQX END=189861996 GT ./. chr2 189862009 . C . . LowGQX END=189862167 GT ./. chr2 189862363 . T . . LowGQX END=189862531 GT ./. chr2 189862929 . T . . LowGQX END=189863097 GT ./. chr2 189863332 . C . . LowGQX END=189863496 GT ./. chr2 189863960 . G . . LowGQX END=189864355 GT ./. chr2 189864505 . T . . LowGQX END=189864673 GT ./. chr2 189866070 . C . . LowGQX END=189866367 GT ./. chr2 189866961 . T . . LowGQX END=189867129 GT ./. chr2 189867630 . T . . LowGQX END=189867840 GT ./. chr2 189868074 . A . . LowGQX END=189868242 GT ./. chr2 189868397 . T . . LowGQX END=189868565 GT ./. chr2 189868657 . A . . LowGQX END=189868921 GT ./. chr2 189868932 . A . . LowGQX END=189869142 GT ./. chr2 189870025 . T . . LowGQX END=189870235 GT ./. chr2 189870303 . C . . LowGQX END=189870403 GT ./. chr2 189870879 . T . . LowGQX END=189871230 GT ./. chr2 189871600 . A . . LowGQX END=189871768 GT ./. chr2 189872175 . T . . LowGQX END=189872385 GT ./. chr2 189872548 . A . . LowGQX END=189872920 GT ./. chr2 189873599 . A . . LowGQX END=189873999 GT ./. chr2 189874853 . T . . LowGQX END=189875143 GT ./. chr2 189875323 . G . . LowGQX END=189875668 GT ./. chr2 189876303 . G . . LowGQX END=189876552 GT ./. chr2 189898745 . T . . LowGQX END=189898994 GT ./. chr2 189899591 . A . . LowGQX END=189899933 GT ./. chr2 189901291 . A . . LowGQX END=189901581 GT ./. chr2 189903947 . T . . LowGQX END=189904341 GT ./. chr2 189906261 . T . . LowGQX END=189906471 GT ./. chr2 189907393 . T . . LowGQX END=189907551 GT ./. chr2 189907826 . C . . LowGQX END=189908036 GT ./. chr2 189909854 . T . . LowGQX END=189910010 GT ./. chr2 189910475 . A . . LowGQX END=189910685 GT ./. chr2 189912872 . T . . LowGQX END=189913040 GT ./. chr2 189914022 . T . . LowGQX END=189914232 GT ./. chr2 189915244 . C . . LowGQX END=189915454 GT ./. chr2 189915995 . T . . LowGQX END=189916259 GT ./. chr2 189916847 . G . . LowGQX END=189917003 GT ./. chr2 189917424 . A . . LowGQX END=189917580 GT ./. chr2 189917586 . T . . LowGQX END=189917796 GT ./. chr2 189918097 . A . . LowGQX END=189918255 GT ./. chr2 189918558 . A . . LowGQX END=189918726 GT ./. chr2 189918822 . T . . LowGQX END=189918990 GT ./. chr2 189921648 . T . . LowGQX END=189921804 GT ./. chr2 189921995 . G . . LowGQX END=189922205 GT ./. chr2 189923104 . A . . LowGQX END=189923305 GT ./. chr2 189923524 . A . . LowGQX END=189923671 GT ./. chr2 189925403 . A . . LowGQX END=189925561 GT ./. chr2 189926225 . T . . LowGQX END=189926393 GT ./. chr2 189927540 . C . . LowGQX END=189927841 GT ./. chr2 189927847 . T . . LowGQX END=189928048 GT ./. chr2 189928655 . A . . LowGQX END=189928811 GT ./. chr2 189929232 . C . . LowGQX END=189929433 GT ./. chr2 189929679 . T . . LowGQX END=189929835 GT ./. chr2 189931065 . A . . LowGQX END=189931275 GT ./. chr2 189931392 . T . . LowGQX END=189931560 GT ./. chr2 189932690 . C . . LowGQX END=189932891 GT ./. chr2 189932901 . C . . LowGQX END=189933048 GT ./. chr2 189933461 . C . . LowGQX END=189933662 GT ./. chr2 189936715 . C . . LowGQX END=189936871 GT ./. chr2 189940068 . G . . LowGQX END=189940215 GT ./. chr2 189943179 . C . . LowGQX END=189943347 GT ./. chr2 189943721 . T . . LowGQX END=189943885 GT ./. chr2 189944641 . T . . LowGQX END=189944809 GT ./. chr2 189945653 . A . . LowGQX END=189945821 GT ./. chr2 189948659 . T . . LowGQX END=189948815 GT ./. chr2 189949835 . A . . LowGQX END=189949991 GT ./. chr2 189950382 . T . . LowGQX END=189950550 GT ./. chr2 189951401 . T . . LowGQX END=189951548 GT ./. chr2 189953370 . A . . LowGQX END=189953550 GT ./. chr2 189956985 . A . . LowGQX END=189957198 GT ./. chr2 189961952 . G . . LowGQX END=189962170 GT ./. chr2 189962319 . T . . LowGQX END=189962419 GT ./. chr2 189963402 . A . . LowGQX END=189963539 GT ./. chr2 189964782 . A . . LowGQX END=189964917 GT ./. chr2 189968917 . A . . LowGQX END=189969055 GT ./. chr2 189974900 . T . . LowGQX END=189975227 GT ./. chr2 190044183 . T . . LowGQX END=190044382 GT ./. chr2 190306212 . C . . LowGQX END=190306312 GT ./. chr2 190313103 . A . . LowGQX END=190313237 GT ./. chr2 190313494 . G . . LowGQX END=190313594 GT ./. chr2 190313959 . T . . LowGQX END=190314059 GT ./. chr2 190315557 . T . . LowGQX END=190315712 GT ./. chr2 190316527 . T . . LowGQX END=190316627 GT ./. chr2 190320044 . A . . LowGQX END=190320173 GT ./. chr2 190321965 . C . . LowGQX END=190322123 GT ./. chr2 190323477 . A . . LowGQX END=190323601 GT ./. chr2 190324057 . A . . LowGQX END=190324210 GT ./. chr2 190327208 . A . . LowGQX END=190327371 GT ./. chr2 190328400 . C . . LowGQX END=190328500 GT ./. chr2 190328570 . A . . LowGQX END=190328690 GT ./. chr2 190329803 . A . . LowGQX END=190329983 GT ./. chr2 190331119 . C . . LowGQX END=190331311 GT ./. chr2 190332192 . A . . LowGQX END=190332377 GT ./. chr2 190333199 . A . . LowGQX END=190333299 GT ./. chr2 190334008 . G . . LowGQX END=190334168 GT ./. chr2 190334800 . A . . LowGQX END=190334974 GT ./. chr2 190335525 . C . . LowGQX END=190335625 GT ./. chr2 190338910 . A . . LowGQX END=190339061 GT ./. chr2 190339439 . C . . LowGQX END=190339591 GT ./. chr2 190339937 . A . . LowGQX END=190340146 GT ./. chr2 190426553 . G . . LowGQX END=190426969 GT ./. chr2 190428259 . C . . LowGQX END=190429003 GT ./. chr2 190430029 . T . . LowGQX END=190430377 GT ./. chr2 190436390 . T . . LowGQX END=190436619 GT ./. chr2 190437515 . C . . LowGQX END=190437739 GT ./. chr2 190439836 . T . . LowGQX END=190440098 GT ./. chr2 190444483 . C . . LowGQX END=190444658 GT ./. chr2 190445093 . C . . LowGQX END=190445289 GT ./. chr2 190448053 . C . . LowGQX END=190448153 GT ./. chr2 190448417 . T . . LowGQX END=190448517 GT ./. chr2 190530857 . C . . LowGQX END=190532325 GT ./. chr2 190532488 . A . . LowGQX END=190532674 GT ./. chr2 190535165 . A . . LowGQX END=190535455 GT ./. chr2 190541216 . A . . LowGQX END=190541820 GT ./. chr2 190554251 . A . . LowGQX END=190554693 GT ./. chr2 190556959 . A . . LowGQX END=190557151 GT ./. chr2 190557798 . A . . LowGQX END=190557958 GT ./. chr2 190559705 . A . . LowGQX END=190559890 GT ./. chr2 190560874 . A . . LowGQX END=190561098 GT ./. chr2 190569747 . A . . LowGQX END=190569953 GT ./. chr2 190571662 . A . . LowGQX END=190571875 GT ./. chr2 190575773 . A . . LowGQX END=190575882 GT ./. chr2 190584296 . A . . LowGQX END=190584301;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 190584302 . C . . LowGQX END=190584542 GT ./. chr2 190585343 . A . . LowGQX END=190585399;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 190585400 . T . . LowGQX END=190585543 GT ./. chr2 190592548 . G . . LowGQX END=190592826 GT ./. chr2 190592991 . A . . LowGQX END=190593149 GT ./. chr2 190593384 . A . . LowGQX END=190593550 GT ./. chr2 190595169 . A . . LowGQX END=190595330 GT ./. chr2 190597831 . A . . LowGQX END=190597958 GT ./. chr2 190602377 . T . . LowGQX END=190602570 GT ./. chr2 190603289 . A . . LowGQX END=190603411 GT ./. chr2 190606066 . A . . LowGQX END=190606180 GT ./. chr2 190607999 . A . . LowGQX END=190608203 GT ./. chr2 190609442 . T . . LowGQX END=190609596 GT ./. chr2 190611104 . A . . LowGQX END=190611356 GT ./. chr2 190615233 . G . . LowGQX END=190615393 GT ./. chr2 190617365 . A . . LowGQX END=190617465 GT ./. chr2 190617574 . C . . LowGQX END=190617706 GT ./. chr2 190618641 . C . . LowGQX END=190618791 GT ./. chr2 190618866 . C . . LowGQX END=190619072 GT ./. chr2 190619874 . A . . LowGQX END=190620294 GT ./. chr2 190626145 . C . . LowGQX END=190626367 GT ./. chr2 190636491 . T . . LowGQX END=190636631 GT ./. chr2 190640286 . C . . LowGQX END=190640445 GT ./. chr2 190642813 . A . . LowGQX END=190642973 GT ./. chr2 190643098 . G . . LowGQX END=190643198 GT ./. chr2 190647146 . A . . LowGQX END=190647324 GT ./. chr2 190656485 . A . . LowGQX END=190656719 GT ./. chr2 190660444 . A . . LowGQX END=190660729 GT ./. chr2 190670327 . C . . LowGQX END=190670609 GT ./. chr2 190671087 . T . . LowGQX END=190671239 GT ./. chr2 190682692 . C . . LowGQX END=190682958 GT ./. chr2 190708639 . T . . LowGQX END=190708858 GT ./. chr2 190717330 . G . . LowGQX END=190717555 GT ./. chr2 190718614 . A . . LowGQX END=190718860 GT ./. chr2 190718914 . T . . LowGQX END=190719906 GT ./. chr2 190720527 . A . . LowGQX END=190720627 GT ./. chr2 190722171 . C . . LowGQX END=190722271 GT ./. chr2 190728418 . A . . LowGQX END=190729006 GT ./. chr2 190729023 . A . . LowGQX END=190729123 GT ./. chr2 190732474 . C . . LowGQX END=190732707 GT ./. chr2 190738171 . C . . LowGQX END=190738434 GT ./. chr2 190741947 . T . . LowGQX END=190742214 GT ./. chr2 190921933 . G . . LowGQX END=190922416 GT ./. chr2 190924737 . T . . LowGQX END=190925213 GT ./. chr2 190926899 . C . . LowGQX END=190927374 GT ./. chr2 191064585 . A . . LowGQX END=191064877 GT ./. chr2 191069792 . G . . LowGQX END=191070010 GT ./. chr2 191073527 . A . . LowGQX END=191073693 GT ./. chr2 191077631 . C . . LowGQX END=191077853 GT ./. chr2 191109562 . G . . LowGQX END=191109746 GT ./. chr2 191110829 . T . . LowGQX END=191110990 GT ./. chr2 191114315 . C . . LowGQX END=191114504 GT ./. chr2 191115053 . C . . LowGQX END=191115153 GT ./. chr2 191116225 . G . . LowGQX END=191116325 GT ./. chr2 191116837 . A . . LowGQX END=191117085 GT ./. chr2 191125831 . C . . LowGQX END=191126012 GT ./. chr2 191152261 . A . . LowGQX END=191152416 GT ./. chr2 191155080 . C . . LowGQX END=191155263 GT ./. chr2 191159221 . T . . LowGQX END=191159398 GT ./. chr2 191161488 . A . . LowGQX END=191161731 GT ./. chr2 191175429 . T . . LowGQX END=191175574 GT ./. chr2 191175687 . G . . LowGQX END=191175787 GT ./. chr2 191184391 . T . . LowGQX END=191184529 GT ./. chr2 191208707 . A . . LowGQX END=191208915 GT ./. chr2 191224827 . A . . LowGQX END=191225035 GT ./. chr2 191227334 . C . . LowGQX END=191227434 GT ./. chr2 191231419 . A . . LowGQX END=191231624 GT ./. chr2 191233827 . A . . LowGQX END=191234006 GT ./. chr2 191235568 . A . . LowGQX END=191236131 GT ./. chr2 191300754 . C . . LowGQX END=191302290 GT ./. chr2 191334482 . A . . LowGQX END=191334584 GT ./. chr2 191353381 . A . . LowGQX END=191353547 GT ./. chr2 191354492 . A . . LowGQX END=191354595 GT ./. chr2 191362163 . A . . LowGQX END=191362448 GT ./. chr2 191364521 . G . . LowGQX END=191364621 GT ./. chr2 191364739 . A . . LowGQX END=191364947 GT ./. chr2 191373914 . G . . LowGQX END=191374084 GT ./. chr2 191375086 . C . . LowGQX END=191375264 GT ./. chr2 191379178 . C . . LowGQX END=191379405 GT ./. chr2 191380995 . C . . LowGQX END=191381111 GT ./. chr2 191382243 . T . . LowGQX END=191382395 GT ./. chr2 191383448 . A . . LowGQX END=191383548 GT ./. chr2 191383677 . C . . LowGQX END=191383910 GT ./. chr2 191389988 . C . . LowGQX END=191390105 GT ./. chr2 191399223 . G . . LowGQX END=191399383 GT ./. chr2 191523901 . T . . LowGQX END=191524724 GT ./. chr2 191535050 . A . . LowGQX END=191535188 GT ./. chr2 191537735 . T . . LowGQX END=191537985 GT ./. chr2 191548459 . C . . LowGQX END=191548612 GT ./. chr2 191550200 . A . . LowGQX END=191550367 GT ./. chr2 191551925 . A . . LowGQX END=191552095 GT ./. chr2 191554966 . T . . LowGQX END=191555066 GT ./. chr2 191745798 . C . . LowGQX END=191746208 GT ./. chr2 191759876 . A . . LowGQX END=191760002 GT ./. chr2 191760328 . A . . LowGQX END=191760454 GT ./. chr2 191765288 . A . . LowGQX END=191765468 GT ./. chr2 191766663 . T . . LowGQX END=191766763 GT ./. chr2 191769698 . A . . LowGQX END=191769896 GT ./. chr2 191774917 . C . . LowGQX END=191775069 GT ./. chr2 191777814 . A . . LowGQX END=191777974 GT ./. chr2 191785707 . T . . LowGQX END=191785807 GT ./. chr2 191785851 . T . . LowGQX END=191785951 GT ./. chr2 191788571 . G . . LowGQX END=191788727 GT ./. chr2 191789187 . C . . LowGQX END=191789345 GT ./. chr2 191792030 . A . . LowGQX END=191792211 GT ./. chr2 191795121 . T . . LowGQX END=191795297 GT ./. chr2 191796268 . C . . LowGQX END=191796368 GT ./. chr2 191797441 . G . . LowGQX END=191797589 GT ./. chr2 191818272 . A . . LowGQX END=191818372 GT ./. chr2 191819308 . A . . LowGQX END=191819547 GT ./. chr2 191827554 . A . . LowGQX END=191827750 GT ./. chr2 191835356 . G . . LowGQX END=191835495 GT ./. chr2 191839505 . T . . LowGQX END=191839710 GT ./. chr2 191840059 . G . . LowGQX END=191840159 GT ./. chr2 191840483 . A . . LowGQX END=191840665 GT ./. chr2 191841515 . C . . LowGQX END=191841803 GT ./. chr2 191843531 . G . . LowGQX END=191843779 GT ./. chr2 191844447 . C . . LowGQX END=191844644 GT ./. chr2 191845295 . C . . LowGQX END=191845447 GT ./. chr2 191847058 . A . . LowGQX END=191847296 GT ./. chr2 191848317 . G . . LowGQX END=191848518 GT ./. chr2 191848985 . T . . LowGQX END=191849171 GT ./. chr2 191850294 . T . . LowGQX END=191850438 GT ./. chr2 191851529 . A . . LowGQX END=191851846 GT ./. chr2 191854290 . A . . LowGQX END=191854452 GT ./. chr2 191855903 . G . . LowGQX END=191856098 GT ./. chr2 191859736 . C . . LowGQX END=191859997 GT ./. chr2 191862521 . C . . LowGQX END=191862785 GT ./. chr2 191862892 . T . . LowGQX END=191863086 GT ./. chr2 191864301 . G . . LowGQX END=191864482 GT ./. chr2 191865749 . T . . LowGQX END=191865941 GT ./. chr2 191872238 . G . . LowGQX END=191872439 GT ./. chr2 191872691 . C . . LowGQX END=191872791 GT ./. chr2 191873638 . C . . LowGQX END=191873885 GT ./. chr2 191874551 . C . . LowGQX END=191874781 GT ./. chr2 191875045 . T . . LowGQX END=191875145 GT ./. chr2 191894474 . A . . LowGQX END=191894630 GT ./. chr2 191895696 . A . . LowGQX END=191895809 GT ./. chr2 191896159 . T . . LowGQX END=191896259 GT ./. chr2 191897679 . C . . LowGQX END=191897878 GT ./. chr2 191898214 . A . . LowGQX END=191898355 GT ./. chr2 191898635 . A . . LowGQX END=191898735 GT ./. chr2 191899249 . A . . LowGQX END=191899349 GT ./. chr2 191900888 . A . . LowGQX END=191901028 GT ./. chr2 191903923 . A . . LowGQX END=191904026 GT ./. chr2 191905783 . A . . LowGQX END=191905883 GT ./. chr2 191919189 . A . . LowGQX END=191919289 GT ./. chr2 191922741 . T . . LowGQX END=191922987 GT ./. chr2 191923364 . A . . LowGQX END=191923516 GT ./. chr2 191926392 . C . . LowGQX END=191926603 GT ./. chr2 191927456 . A . . LowGQX END=191927649 GT ./. chr2 191929531 . A . . LowGQX END=191929687 GT ./. chr2 191931149 . C . . LowGQX END=191931249 GT ./. chr2 191934357 . A . . LowGQX END=191934509 GT ./. chr2 191937821 . T . . LowGQX END=191937921 GT ./. chr2 191940914 . T . . LowGQX END=191941054 GT ./. chr2 191996536 . A . . LowGQX END=191996636 GT ./. chr2 192011337 . A . . LowGQX END=192011486 GT ./. chr2 192012760 . C . . LowGQX END=192012932 GT ./. chr2 192141620 . C . . LowGQX END=192141800 GT ./. chr2 192160835 . A . . LowGQX END=192160955 GT ./. chr2 192194659 . A . . LowGQX END=192194759 GT ./. chr2 192206185 . A . . LowGQX END=192206294 GT ./. chr2 192210880 . T . . LowGQX END=192211036 GT ./. chr2 192214816 . T . . LowGQX END=192214970 GT ./. chr2 192225355 . A . . LowGQX END=192225458 GT ./. chr2 192226992 . A . . LowGQX END=192227100 GT ./. chr2 192228452 . A . . LowGQX END=192228604 GT ./. chr2 192228628 . T . . LowGQX END=192228728 GT ./. chr2 192228882 . A . . LowGQX END=192229005 GT ./. chr2 192234262 . T . . LowGQX END=192234362 GT ./. chr2 192234936 . T . . LowGQX END=192235036 GT ./. chr2 192246089 . A . . LowGQX END=192246295 GT ./. chr2 192247934 . A . . LowGQX END=192248088 GT ./. chr2 192250608 . A . . LowGQX END=192250813 GT ./. chr2 192251948 . A . . LowGQX END=192252286 GT ./. chr2 192255016 . A . . LowGQX END=192255221 GT ./. chr2 192256831 . T . . LowGQX END=192256931 GT ./. chr2 192257797 . A . . LowGQX END=192257951 GT ./. chr2 192261140 . C . . LowGQX END=192261240 GT ./. chr2 192265045 . T . . LowGQX END=192265202 GT ./. chr2 192265468 . A . . LowGQX END=192265568 GT ./. chr2 192267291 . C . . LowGQX END=192267451 GT ./. chr2 192272829 . T . . LowGQX END=192272929 GT ./. chr2 192273768 . A . . LowGQX END=192273948 GT ./. chr2 192275790 . A . . LowGQX END=192275901 GT ./. chr2 192278772 . A . . LowGQX END=192278909 GT ./. chr2 192279241 . A . . LowGQX END=192279431 GT ./. chr2 192280839 . A . . LowGQX END=192281021 GT ./. chr2 192288561 . A . . LowGQX END=192288689 GT ./. chr2 192543337 . C . . LowGQX END=192543437 GT ./. chr2 192543714 . A . . LowGQX END=192543857 GT ./. chr2 192546598 . T . . LowGQX END=192546810 GT ./. chr2 192547218 . T . . LowGQX END=192547318 GT ./. chr2 192548392 . C . . LowGQX END=192548603 GT ./. chr2 192548880 . G . . LowGQX END=192549094 GT ./. chr2 192550323 . A . . LowGQX END=192550523 GT ./. chr2 192700647 . G . . LowGQX END=192701446 GT ./. chr2 192711167 . A . . LowGQX END=192711654 GT ./. chr2 192815035 . C . . LowGQX END=192815234 GT ./. chr2 192818403 . A . . LowGQX END=192818566 GT ./. chr2 192820979 . A . . LowGQX END=192821107 GT ./. chr2 192862916 . A . . LowGQX END=192863068 GT ./. chr2 192863784 . A . . LowGQX END=192863937 GT ./. chr2 192922403 . A . . LowGQX END=192922504 GT ./. chr2 193044304 . C . . LowGQX END=193044474 GT ./. chr2 193049078 . A . . LowGQX END=193049212 GT ./. chr2 193056604 . A . . LowGQX END=193056718 GT ./. chr2 193059077 . A . . LowGQX END=193059253 GT ./. chr2 196544765 . A . . LowGQX END=196545777 GT ./. chr2 196548421 . A . . LowGQX END=196548633 GT ./. chr2 196571327 . T . . LowGQX END=196571512 GT ./. chr2 196573378 . A . . LowGQX END=196573578 GT ./. chr2 196578155 . A . . LowGQX END=196578325 GT ./. chr2 196581359 . A . . LowGQX END=196581732 GT ./. chr2 196582967 . C . . LowGQX END=196583067 GT ./. chr2 196592881 . A . . LowGQX END=196593076 GT ./. chr2 196599605 . A . . LowGQX END=196599768 GT ./. chr2 196602643 . G . . LowGQX END=196602854 GT ./. chr2 196605488 . A . . LowGQX END=196605596 GT ./. chr2 196619059 . A . . LowGQX END=196619241 GT ./. chr2 196620855 . A . . LowGQX END=196621012 GT ./. chr2 196636382 . A . . LowGQX END=196636617 GT ./. chr2 196640568 . A . . LowGQX END=196640710 GT ./. chr2 196642522 . A . . LowGQX END=196642712 GT ./. chr2 196651732 . A . . LowGQX END=196651922 GT ./. chr2 196659060 . A . . LowGQX END=196659265 GT ./. chr2 196661298 . A . . LowGQX END=196661464 GT ./. chr2 196664018 . A . . LowGQX END=196664199 GT ./. chr2 196671461 . T . . LowGQX END=196671561 GT ./. chr2 196673394 . G . . LowGQX END=196673603 GT ./. chr2 196674467 . A . . LowGQX END=196674598 GT ./. chr2 196681350 . A . . LowGQX END=196681690 GT ./. chr2 196682418 . A . . LowGQX END=196682556 GT ./. chr2 196688977 . G . . LowGQX END=196689172 GT ./. chr2 196698898 . C . . LowGQX END=196699087 GT ./. chr2 196709724 . A . . LowGQX END=196709892 GT ./. chr2 196718065 . A . . LowGQX END=196718255 GT ./. chr2 196720533 . A . . LowGQX END=196720718 GT ./. chr2 196722099 . A . . LowGQX END=196722450 GT ./. chr2 196723196 . A . . LowGQX END=196723531 GT ./. chr2 196726439 . A . . LowGQX END=196726673 GT ./. chr2 196728871 . A . . LowGQX END=196729748 GT ./. chr2 196736972 . A . . LowGQX END=196737196 GT ./. chr2 196738290 . A . . LowGQX END=196738470 GT ./. chr2 196740397 . A . . LowGQX END=196740570 GT ./. chr2 196741236 . A . . LowGQX END=196741426 GT ./. chr2 196746517 . A . . LowGQX END=196746719 GT ./. chr2 196749307 . A . . LowGQX END=196749536 GT ./. chr2 196750863 . A . . LowGQX END=196750999 GT ./. chr2 196752960 . T . . LowGQX END=196753210 GT ./. chr2 196753521 . A . . LowGQX END=196753721 GT ./. chr2 196756377 . A . . LowGQX END=196756531 GT ./. chr2 196759698 . G . . LowGQX END=196759951 GT ./. chr2 196762389 . A . . LowGQX END=196762492 GT ./. chr2 196765004 . A . . LowGQX END=196765221 GT ./. chr2 196771381 . A . . LowGQX END=196771513 GT ./. chr2 196771629 . A . . LowGQX END=196771736 GT ./. chr2 196774749 . A . . LowGQX END=196774922 GT ./. chr2 196786810 . A . . LowGQX END=196786924 GT ./. chr2 196788317 . A . . LowGQX END=196788534 GT ./. chr2 196791148 . A . . LowGQX END=196791293 GT ./. chr2 196799313 . A . . LowGQX END=196799516 GT ./. chr2 196801311 . T . . LowGQX END=196801519 GT ./. chr2 196821983 . A . . LowGQX END=196822174 GT ./. chr2 196824982 . A . . LowGQX END=196825672 GT ./. chr2 196834640 . A . . LowGQX END=196834821 GT ./. chr2 196836964 . A . . LowGQX END=196837193 GT ./. chr2 196849346 . T . . LowGQX END=196849446 GT ./. chr2 196851788 . A . . LowGQX END=196851920 GT ./. chr2 196852679 . A . . LowGQX END=196852956 GT ./. chr2 196863813 . G . . LowGQX END=196863967 GT ./. chr2 196865426 . A . . LowGQX END=196865610 GT ./. chr2 196866397 . A . . LowGQX END=196866585 GT ./. chr2 196877459 . A . . LowGQX END=196877679 GT ./. chr2 196883892 . A . . LowGQX END=196884022 GT ./. chr2 196889141 . C . . LowGQX END=196889241 GT ./. chr2 196891482 . A . . LowGQX END=196891667 GT ./. chr2 196892678 . A . . LowGQX END=196892778 GT ./. chr2 196912074 . A . . LowGQX END=196912226 GT ./. chr2 196913018 . A . . LowGQX END=196913131 GT ./. chr2 196915893 . T . . LowGQX END=196915993 GT ./. chr2 196922706 . T . . LowGQX END=196922861 GT ./. chr2 196933379 . C . . LowGQX END=196933479 GT ./. chr2 196935615 . C . . LowGQX END=196935775 GT ./. chr2 197002169 . T . . LowGQX END=197002456 GT ./. chr2 197004342 . A . . LowGQX END=197004552 GT ./. chr2 197005891 . T . . LowGQX END=197006048 GT ./. chr2 197008282 . A . . LowGQX END=197008413 GT ./. chr2 197010633 . A . . LowGQX END=197010813 GT ./. chr2 197021161 . A . . LowGQX END=197021378 GT ./. chr2 197027934 . A . . LowGQX END=197028164 GT ./. chr2 197065999 . G . . LowGQX END=197066115 GT ./. chr2 197080587 . A . . LowGQX END=197080704 GT ./. chr2 197081660 . A . . LowGQX END=197081879 GT ./. chr2 197084761 . A . . LowGQX END=197084880 GT ./. chr2 197085517 . A . . LowGQX END=197085668 GT ./. chr2 197086933 . A . . LowGQX END=197087067 GT ./. chr2 197090494 . A . . LowGQX END=197090597 GT ./. chr2 197092824 . A . . LowGQX END=197092981 GT ./. chr2 197105171 . A . . LowGQX END=197105289 GT ./. chr2 197106806 . A . . LowGQX END=197106931 GT ./. chr2 197118642 . A . . LowGQX END=197118756 GT ./. chr2 197122539 . G . . LowGQX END=197122639 GT ./. chr2 197135915 . A . . LowGQX END=197136016 GT ./. chr2 197138743 . A . . LowGQX END=197138850 GT ./. chr2 197143250 . A . . LowGQX END=197143389 GT ./. chr2 197157287 . A . . LowGQX END=197157477 GT ./. chr2 197171210 . A . . LowGQX END=197171339 GT ./. chr2 197171852 . A . . LowGQX END=197171960 GT ./. chr2 197172607 . A . . LowGQX END=197172812 GT ./. chr2 197181996 . A . . LowGQX END=197182096 GT ./. chr2 197183274 . A . . LowGQX END=197184631 GT ./. chr2 197185061 . A . . LowGQX END=197185166 GT ./. chr2 197187200 . A . . LowGQX END=197187347 GT ./. chr2 197189702 . A . . LowGQX END=197189876 GT ./. chr2 197194287 . A . . LowGQX END=197194387 GT ./. chr2 197199146 . A . . LowGQX END=197199246 GT ./. chr2 197208379 . A . . LowGQX END=197208491 GT ./. chr2 197297854 . A . . LowGQX END=197298150 GT ./. chr2 197504447 . G . . LowGQX END=197504547 GT ./. chr2 197511064 . G . . LowGQX END=197511229 GT ./. chr2 197521356 . G . . LowGQX END=197521578 GT ./. chr2 197521681 . G . . LowGQX END=197521861 GT ./. chr2 197523445 . C . . LowGQX END=197523600 GT ./. chr2 197530290 . G . . LowGQX END=197530408 GT ./. chr2 197531442 . G . . LowGQX END=197531656 GT ./. chr2 197534476 . A . . LowGQX END=197534629 GT ./. chr2 197537065 . A . . LowGQX END=197537165 GT ./. chr2 197538914 . A . . LowGQX END=197539073 GT ./. chr2 197540866 . G . . LowGQX END=197540992 GT ./. chr2 197541277 . G . . LowGQX END=197541456 GT ./. chr2 197541795 . G . . LowGQX END=197541895 GT ./. chr2 197542001 . C . . LowGQX END=197542101 GT ./. chr2 197559769 . G . . LowGQX END=197559884 GT ./. chr2 197565819 . G . . LowGQX END=197565919 GT ./. chr2 197576868 . G . . LowGQX END=197576977 GT ./. chr2 197577382 . T . . LowGQX END=197577482 GT ./. chr2 197578080 . G . . LowGQX END=197578408 GT ./. chr2 197583226 . G . . LowGQX END=197583356 GT ./. chr2 197584220 . G . . LowGQX END=197584391 GT ./. chr2 197584789 . A . . LowGQX END=197584949 GT ./. chr2 197585296 . T . . LowGQX END=197585396 GT ./. chr2 197586245 . G . . LowGQX END=197586416 GT ./. chr2 197590696 . G . . LowGQX END=197590830 GT ./. chr2 197593916 . G . . LowGQX END=197594154 GT ./. chr2 197594501 . T . . LowGQX END=197594601 GT ./. chr2 197594680 . G . . LowGQX END=197594843 GT ./. chr2 197595576 . T . . LowGQX END=197595676 GT ./. chr2 197596756 . G . . LowGQX END=197596877 GT ./. chr2 197597169 . G . . LowGQX END=197597287 GT ./. chr2 197629285 . C . . LowGQX END=197629412 GT ./. chr2 197631287 . A . . LowGQX END=197631444 GT ./. chr2 197634587 . A . . LowGQX END=197634766 GT ./. chr2 197636470 . A . . LowGQX END=197636665 GT ./. chr2 197637638 . A . . LowGQX END=197637880 GT ./. chr2 197638312 . A . . LowGQX END=197638472 GT ./. chr2 197639796 . A . . LowGQX END=197639978 GT ./. chr2 197640732 . A . . LowGQX END=197640838 GT ./. chr2 197641149 . A . . LowGQX END=197641356 GT ./. chr2 197643579 . T . . LowGQX END=197643794 GT ./. chr2 197645258 . C . . LowGQX END=197645389 GT ./. chr2 197649568 . A . . LowGQX END=197649668 GT ./. chr2 197650163 . A . . LowGQX END=197650315 GT ./. chr2 197653926 . A . . LowGQX END=197654096 GT ./. chr2 197654601 . A . . LowGQX END=197654797 GT ./. chr2 197656059 . A . . LowGQX END=197656187 GT ./. chr2 197657668 . G . . LowGQX END=197657879 GT ./. chr2 197662519 . A . . LowGQX END=197662635 GT ./. chr2 197664222 . G . . LowGQX END=197664353 GT ./. chr2 197672165 . T . . LowGQX END=197672365 GT ./. chr2 197673936 . A . . LowGQX END=197674114 GT ./. chr2 197705956 . T . . LowGQX END=197706099 GT ./. chr2 197707443 . A . . LowGQX END=197707552 GT ./. chr2 197708610 . A . . LowGQX END=197708802 GT ./. chr2 197709224 . T . . LowGQX END=197709376 GT ./. chr2 197710604 . A . . LowGQX END=197710744 GT ./. chr2 197711725 . A . . LowGQX END=197711927 GT ./. chr2 197712667 . T . . LowGQX END=197712767 GT ./. chr2 197729708 . T . . LowGQX END=197729859 GT ./. chr2 197735635 . A . . LowGQX END=197735735 GT ./. chr2 197737163 . A . . LowGQX END=197737276 GT ./. chr2 197737612 . A . . LowGQX END=197737768 GT ./. chr2 197738228 . A . . LowGQX END=197738328 GT ./. chr2 197738396 . C . . LowGQX END=197738496 GT ./. chr2 197740398 . A . . LowGQX END=197740558 GT ./. chr2 197744729 . T . . LowGQX END=197744948 GT ./. chr2 197750124 . T . . LowGQX END=197750276 GT ./. chr2 197750476 . C . . LowGQX END=197750632 GT ./. chr2 197755544 . T . . LowGQX END=197755644 GT ./. chr2 197756988 . A . . LowGQX END=197757148 GT ./. chr2 197757862 . A . . LowGQX END=197757972 GT ./. chr2 197761783 . C . . LowGQX END=197761939 GT ./. chr2 197763018 . A . . LowGQX END=197763118 GT ./. chr2 197767307 . A . . LowGQX END=197767469 GT ./. chr2 197777604 . A . . LowGQX END=197777780 GT ./. chr2 197781140 . A . . LowGQX END=197781320 GT ./. chr2 197784719 . A . . LowGQX END=197784877 GT ./. chr2 197786860 . C . . LowGQX END=197786960 GT ./. chr2 197791192 . A . . LowGQX END=197791343 GT ./. chr2 197792274 . C . . LowGQX END=197792374 GT ./. chr2 197832107 . T . . LowGQX END=197832207 GT ./. chr2 197854294 . G . . LowGQX END=197854394 GT ./. chr2 197858303 . T . . LowGQX END=197858403 GT ./. chr2 197860093 . T . . LowGQX END=197860193 GT ./. chr2 197863053 . T . . LowGQX END=197863153 GT ./. chr2 197863629 . A . . LowGQX END=197863779 GT ./. chr2 197865135 . T . . LowGQX END=197865235 GT ./. chr2 197866471 . A . . LowGQX END=197866571 GT ./. chr2 197870416 . A . . LowGQX END=197870637 GT ./. chr2 197872528 . A . . LowGQX END=197872650 GT ./. chr2 197873662 . A . . LowGQX END=197873762 GT ./. chr2 197878233 . A . . LowGQX END=197878439 GT ./. chr2 197889906 . G . . LowGQX END=197890006 GT ./. chr2 197943336 . G . . LowGQX END=197943541 GT ./. chr2 197946360 . G . . LowGQX END=197946460 GT ./. chr2 197948091 . A . . LowGQX END=197948236 GT ./. chr2 197951389 . T . . LowGQX END=197951489 GT ./. chr2 197953433 . A . . LowGQX END=197953553 GT ./. chr2 197954666 . T . . LowGQX END=197954766 GT ./. chr2 197964535 . C . . LowGQX END=197964657 GT ./. chr2 197975480 . T . . LowGQX END=197975580 GT ./. chr2 197986054 . A . . LowGQX END=197986271 GT ./. chr2 197987372 . A . . LowGQX END=197987519 GT ./. chr2 197990099 . C . . LowGQX END=197990199 GT ./. chr2 197990559 . A . . LowGQX END=197990764 GT ./. chr2 198001292 . A . . LowGQX END=198001392 GT ./. chr2 198011741 . A . . LowGQX END=198011841 GT ./. chr2 198012561 . T . . LowGQX END=198012661 GT ./. chr2 198051740 . C . . LowGQX END=198051840 GT ./. chr2 198175205 . G . . LowGQX END=198175365 GT ./. chr2 198257025 . A . . LowGQX END=198257188 GT ./. chr2 198257694 . A . . LowGQX END=198257915 GT ./. chr2 198260778 . A . . LowGQX END=198261055 GT ./. chr2 198262707 . A . . LowGQX END=198262843 GT ./. chr2 198263133 . C . . LowGQX END=198263308 GT ./. chr2 198263673 . T . . LowGQX END=198263773 GT ./. chr2 198264777 . A . . LowGQX END=198264893 GT ./. chr2 198264974 . A . . LowGQX END=198265161 GT ./. chr2 198265437 . A . . LowGQX END=198265663 GT ./. chr2 198266122 . A . . LowGQX END=198266302 GT ./. chr2 198266424 . T . . LowGQX END=198266615 GT ./. chr2 198266667 . A . . LowGQX END=198266857 GT ./. chr2 198267278 . A . . LowGQX END=198267553 GT ./. chr2 198267667 . A . . LowGQX END=198267767 GT ./. chr2 198268307 . A . . LowGQX END=198268507 GT ./. chr2 198269798 . A . . LowGQX END=198269904 GT ./. chr2 198269997 . A . . LowGQX END=198270199 GT ./. chr2 198272720 . A . . LowGQX END=198272846 GT ./. chr2 198273091 . A . . LowGQX END=198273308 GT ./. chr2 198274492 . A . . LowGQX END=198274734 GT ./. chr2 198281463 . A . . LowGQX END=198281638 GT ./. chr2 198283223 . G . . LowGQX END=198283323 GT ./. chr2 198283616 . G . . LowGQX END=198283716 GT ./. chr2 198285101 . C . . LowGQX END=198285269 GT ./. chr2 198285751 . A . . LowGQX END=198285860 GT ./. chr2 198288509 . C . . LowGQX END=198288720 GT ./. chr2 198299660 . A . . LowGQX END=198299760 GT ./. chr2 198318283 . T . . LowGQX END=198318391 GT ./. chr2 198318714 . G . . LowGQX END=198318814 GT ./. chr2 198324654 . A . . LowGQX END=198324808 GT ./. chr2 198327251 . T . . LowGQX END=198327458 GT ./. chr2 198334792 . A . . LowGQX END=198334898 GT ./. chr2 198338479 . A . . LowGQX END=198338651 GT ./. chr2 198351719 . T . . LowGQX END=198351974 GT ./. chr2 198352531 . A . . LowGQX END=198352812 GT ./. chr2 198352990 . T . . LowGQX END=198353267 GT ./. chr2 198353675 . T . . LowGQX END=198354023 GT ./. chr2 198354870 . C . . LowGQX END=198355072 GT ./. chr2 198357997 . A . . LowGQX END=198358268 GT ./. chr2 198358827 . A . . LowGQX END=198359026 GT ./. chr2 198359330 . T . . LowGQX END=198359528 GT ./. chr2 198359967 . C . . LowGQX END=198360152 GT ./. chr2 198361789 . T . . LowGQX END=198362168 GT ./. chr2 198363348 . T . . LowGQX END=198363624 GT ./. chr2 198365113 . T . . LowGQX END=198365133 GT ./. chr2 198365134 . G . . LowGQX END=198365143;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 198365144 . C . . LowGQX . GT ./. chr2 198365145 . T . . LowGQX END=198365146;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 198365147 . A . . LowGQX . GT ./. chr2 198365148 . G . . LowGQX END=198365149;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 198365150 . C . . LowGQX . GT ./. chr2 198365151 . G . . LowGQX END=198365164;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 198365165 . T . . LowGQX . GT ./. chr2 198365166 . G . . LowGQX END=198365170;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 198365171 . C . . LowGQX . GT ./. chr2 198365172 . C . . LowGQX END=198365173;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 198365174 . C . . LowGQX . GT ./. chr2 198365175 . G . . LowGQX . GT:DP:GQX:MQ 0/0:2:3:60 chr2 198365176 . T . 33 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr2 198365177 . G . . LowGQX . GT:DP:GQX:MQ 0/0:2:3:60 chr2 198365178 . G . . LowGQX END=198365182 GT ./. chr2 198365183 . G . . LowGQX END=198365186;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 198365187 . C . . LowGQX END=198365188 GT ./. chr2 198365189 . T . . LowGQX END=198365192;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 198365193 . G . . LowGQX . GT ./. chr2 198365194 . G . . LowGQX . GT:DP:GQX:MQ 0/0:2:3:60 chr2 198365195 . C . . LowGQX END=198365213 GT ./. chr2 198365796 . A . . LowGQX END=198365965 GT ./. chr2 198367761 . A . . LowGQX END=198367901 GT ./. chr2 198367909 . A . . LowGQX END=198368009 GT ./. chr2 198380731 . G . . LowGQX END=198380949 GT ./. chr2 198381334 . C . . LowGQX END=198381458 GT ./. chr2 198388276 . G . . LowGQX END=198388430 GT ./. chr2 198400252 . A . . LowGQX END=198400412 GT ./. chr2 198404807 . C . . LowGQX END=198404907 GT ./. chr2 198405069 . T . . LowGQX END=198405169 GT ./. chr2 198413050 . T . . LowGQX END=198413150 GT ./. chr2 198414997 . A . . LowGQX END=198415113 GT ./. chr2 198415237 . A . . LowGQX END=198415373 GT ./. chr2 198436730 . G . . LowGQX END=198437007 GT ./. chr2 198452681 . A . . LowGQX END=198452781 GT ./. chr2 198460705 . T . . LowGQX END=198460805 GT ./. chr2 198480598 . A . . LowGQX END=198480706 GT ./. chr2 198482522 . A . . LowGQX END=198482648 GT ./. chr2 198495663 . A . . LowGQX END=198495983 GT ./. chr2 198498440 . A . . LowGQX END=198498724 GT ./. chr2 198508830 . G . . LowGQX END=198508999 GT ./. chr2 198511205 . A . . LowGQX END=198511393 GT ./. chr2 198540042 . A . . LowGQX END=198540185 GT ./. chr2 198557783 . C . . LowGQX END=198557941 GT ./. chr2 198563511 . T . . LowGQX END=198563611 GT ./. chr2 198570128 . C . . LowGQX END=198571914 GT ./. chr2 198593190 . T . . LowGQX END=198593305 GT ./. chr2 198607783 . A . . LowGQX END=198607886 GT ./. chr2 198621150 . A . . LowGQX END=198621283 GT ./. chr2 198622051 . A . . LowGQX END=198622205 GT ./. chr2 198623649 . A . . LowGQX END=198623749 GT ./. chr2 198631242 . T . . LowGQX END=198631342 GT ./. chr2 198636537 . A . . LowGQX END=198636709 GT ./. chr2 198638711 . G . . LowGQX END=198638811 GT ./. chr2 198640317 . T . . LowGQX END=198640477 GT ./. chr2 198641701 . A . . LowGQX END=198641861 GT ./. chr2 198643695 . T . . LowGQX END=198643795 GT ./. chr2 198646444 . A . . LowGQX END=198646592 GT ./. chr2 198649305 . C . . LowGQX END=198649405 GT ./. chr2 198650608 . G . . LowGQX END=198650768 GT ./. chr2 198669752 . C . . LowGQX END=198670132 GT ./. chr2 198674988 . G . . LowGQX END=198675088 GT ./. chr2 198866647 . G . . LowGQX END=198866782 GT ./. chr2 198948481 . G . . LowGQX END=198950959 GT ./. chr2 198953580 . A . . LowGQX END=198953788 GT ./. chr2 198965997 . A . . LowGQX END=198966097 GT ./. chr2 198968549 . A . . LowGQX END=198968663 GT ./. chr2 199011502 . A . . LowGQX END=199011689 GT ./. chr2 200136883 . A . . LowGQX END=200137447 GT ./. chr2 200173432 . C . . LowGQX END=200173732 GT ./. chr2 200188475 . G . . LowGQX END=200188733 GT ./. chr2 200193370 . C . . LowGQX END=200193685 GT ./. chr2 200213258 . T . . LowGQX END=200213938 GT ./. chr2 200233277 . A . . LowGQX END=200233482 GT ./. chr2 200245036 . G . . LowGQX END=200245262 GT ./. chr2 200246366 . T . . LowGQX END=200246595 GT ./. chr2 200262438 . C . . LowGQX END=200262598 GT ./. chr2 200298010 . C . . LowGQX END=200298289 GT ./. chr2 200320541 . G . . LowGQX END=200320812 GT ./. chr2 200323126 . A . . LowGQX END=200323466 GT ./. chr2 200625497 . T . . LowGQX END=200625597 GT ./. chr2 200677388 . A . . LowGQX END=200677488 GT ./. chr2 200684248 . T . . LowGQX END=200684481 GT ./. chr2 200709121 . A . . LowGQX END=200709256 GT ./. chr2 200710796 . A . . LowGQX END=200710896 GT ./. chr2 200713570 . C . . LowGQX END=200713686 GT ./. chr2 200776161 . C . . LowGQX END=200776504 GT ./. chr2 200789784 . G . . LowGQX END=200790610 GT ./. chr2 200797788 . A . . LowGQX END=200798049 GT ./. chr2 200800652 . A . . LowGQX END=200800773 GT ./. chr2 200801122 . C . . LowGQX END=200801222 GT ./. chr2 200803654 . A . . LowGQX END=200803796 GT ./. chr2 200804730 . A . . LowGQX END=200804885 GT ./. chr2 200808416 . A . . LowGQX END=200808573 GT ./. chr2 200812995 . T . . LowGQX END=200813198 GT ./. chr2 200820105 . G . . LowGQX END=200820119 GT ./. chr2 200820120 . G . . LowGQX END=200820205;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 200820520 . A . . LowGQX END=200820974 GT ./. chr2 200823977 . A . . LowGQX END=200824077 GT ./. chr2 200824475 . A . . LowGQX END=200824606 GT ./. chr2 200826502 . A . . LowGQX END=200826654 GT ./. chr2 200828446 . T . . LowGQX END=200828546 GT ./. chr2 200870434 . T . . LowGQX END=200870534 GT ./. chr2 200873145 . A . . LowGQX END=200873245 GT ./. chr2 201173755 . A . . LowGQX END=201173855 GT ./. chr2 201194129 . C . . LowGQX END=201194229 GT ./. chr2 201215963 . T . . LowGQX END=201216063 GT ./. chr2 201253926 . C . . LowGQX END=201254026 GT ./. chr2 201257935 . T . . LowGQX END=201258035 GT ./. chr2 201277033 . G . . LowGQX END=201277143 GT ./. chr2 201281077 . T . . LowGQX END=201281177 GT ./. chr2 201283972 . G . . LowGQX END=201284220 GT ./. chr2 201303844 . G . . LowGQX END=201304052 GT ./. chr2 201305371 . G . . LowGQX END=201305508 GT ./. chr2 201324471 . T . . LowGQX END=201324571 GT ./. chr2 201325561 . A . . LowGQX END=201325750 GT ./. chr2 201332012 . G . . LowGQX END=201332123 GT ./. chr2 201334636 . G . . LowGQX END=201334740 GT ./. chr2 201337554 . G . . LowGQX END=201337776 GT ./. chr2 201342358 . G . . LowGQX END=201342755 GT ./. chr2 201354821 . C . . LowGQX END=201355342 GT ./. chr2 201357893 . A . . LowGQX END=201358000 GT ./. chr2 201362432 . T . . LowGQX END=201362573 GT ./. chr2 201363602 . A . . LowGQX END=201363810 GT ./. chr2 201369469 . A . . LowGQX END=201369685 GT ./. chr2 201371548 . T . . LowGQX END=201371742 GT ./. chr2 201397657 . T . . LowGQX END=201397834 GT ./. chr2 201399697 . C . . LowGQX END=201399897 GT ./. chr2 201400777 . T . . LowGQX END=201400877 GT ./. chr2 201407295 . A . . LowGQX END=201407395 GT ./. chr2 201434384 . A . . LowGQX END=201434657 GT ./. chr2 201435771 . A . . LowGQX END=201438703 GT ./. chr2 201440032 . A . . LowGQX END=201440187 GT ./. chr2 201440761 . T . . LowGQX END=201440861 GT ./. chr2 201445150 . G . . LowGQX END=201445310 GT ./. chr2 201448130 . A . . LowGQX END=201448230 GT ./. chr2 201450745 . G . . LowGQX END=201450905 GT ./. chr2 201457848 . C . . LowGQX END=201457948 GT ./. chr2 201459993 . A . . LowGQX END=201460094 GT ./. chr2 201462118 . A . . LowGQX END=201462231 GT ./. chr2 201464341 . A . . LowGQX END=201464472 GT ./. chr2 201466988 . C . . LowGQX END=201467088 GT ./. chr2 201467985 . A . . LowGQX END=201468085 GT ./. chr2 201468731 . T . . LowGQX END=201468831 GT ./. chr2 201469417 . A . . LowGQX END=201469566 GT ./. chr2 201470256 . T . . LowGQX END=201470356 GT ./. chr2 201473705 . A . . LowGQX END=201473861 GT ./. chr2 201474041 . A . . LowGQX END=201474141 GT ./. chr2 201476105 . A . . LowGQX END=201476219 GT ./. chr2 201477330 . A . . LowGQX END=201477519 GT ./. chr2 201478525 . A . . LowGQX END=201478692 GT ./. chr2 201480691 . C . . LowGQX END=201480791 GT ./. chr2 201485371 . A . . LowGQX END=201485571 GT ./. chr2 201485841 . A . . LowGQX END=201485972 GT ./. chr2 201488582 . A . . LowGQX END=201488709 GT ./. chr2 201492074 . A . . LowGQX END=201492175 GT ./. chr2 201499512 . A . . LowGQX END=201499641 GT ./. chr2 201501632 . A . . LowGQX END=201501770 GT ./. chr2 201502932 . T . . LowGQX END=201503032 GT ./. chr2 201505815 . C . . LowGQX END=201505915 GT ./. chr2 201507321 . G . . LowGQX END=201507527 GT ./. chr2 201515695 . A . . LowGQX END=201515927 GT ./. chr2 201521563 . A . . LowGQX END=201521663 GT ./. chr2 201523886 . A . . LowGQX END=201524019 GT ./. chr2 201524706 . A . . LowGQX END=201524806 GT ./. chr2 201526279 . C . . LowGQX END=201526379 GT ./. chr2 201527576 . A . . LowGQX END=201527695 GT ./. chr2 201531393 . C . . LowGQX END=201531493 GT ./. chr2 201533336 . A . . LowGQX END=201533536 GT ./. chr2 201534296 . A . . LowGQX END=201534468 GT ./. chr2 201535328 . C . . LowGQX END=201535428 GT ./. chr2 201541593 . T . . LowGQX END=201541693 GT ./. chr2 201676982 . G . . LowGQX END=201677224 GT ./. chr2 201677558 . A . . LowGQX END=201677658 GT ./. chr2 201677918 . T . . LowGQX END=201678018 GT ./. chr2 201680063 . G . . LowGQX END=201680241 GT ./. chr2 201680328 . A . . LowGQX END=201680488 GT ./. chr2 201681031 . T . . LowGQX END=201681131 GT ./. chr2 201681828 . G . . LowGQX END=201681965 GT ./. chr2 201682696 . G . . LowGQX END=201682807 GT ./. chr2 201682945 . G . . LowGQX END=201683145 GT ./. chr2 201683477 . G . . LowGQX END=201683657 GT ./. chr2 201684704 . G . . LowGQX END=201684844 GT ./. chr2 201685905 . G . . LowGQX END=201686029 GT ./. chr2 201686836 . C . . LowGQX END=201686936 GT ./. chr2 201707880 . A . . LowGQX END=201707980 GT ./. chr2 201718027 . A . . LowGQX END=201718175 GT ./. chr2 201718622 . T . . LowGQX END=201718722 GT ./. chr2 201719329 . T . . LowGQX END=201719429 GT ./. chr2 201719719 . T . . LowGQX END=201719819 GT ./. chr2 201721403 . A . . LowGQX END=201721537 GT ./. chr2 201721612 . A . . LowGQX END=201721712 GT ./. chr2 201722439 . A . . LowGQX END=201722610 GT ./. chr2 201722694 . A . . LowGQX END=201722830 GT ./. chr2 201724400 . T . . LowGQX END=201724500 GT ./. chr2 201724844 . A . . LowGQX END=201724944 GT ./. chr2 201725959 . A . . LowGQX END=201726192 GT ./. chr2 201726423 . A . . LowGQX END=201726588 GT ./. chr2 201728823 . C . . LowGQX END=201728950 GT ./. chr2 201736116 . A . . LowGQX END=201736247 GT ./. chr2 201741640 . A . . LowGQX END=201741763 GT ./. chr2 201746128 . A . . LowGQX END=201746228 GT ./. chr2 201747062 . T . . LowGQX END=201747213 GT ./. chr2 201749933 . A . . LowGQX END=201750091 GT ./. chr2 201750349 . T . . LowGQX END=201750509 GT ./. chr2 201752288 . A . . LowGQX END=201752388 GT ./. chr2 201753659 . T . . LowGQX END=201753759 GT ./. chr2 201756666 . T . . LowGQX END=201757105 GT ./. chr2 201757967 . A . . LowGQX END=201758155 GT ./. chr2 201759985 . A . . LowGQX END=201760116 GT ./. chr2 201761797 . A . . LowGQX END=201761940 GT ./. chr2 201764100 . T . . LowGQX END=201764200 GT ./. chr2 201768215 . A . . LowGQX END=201768468 GT ./. chr2 201776018 . A . . LowGQX END=201776118 GT ./. chr2 201778016 . A . . LowGQX END=201778139 GT ./. chr2 201778635 . T . . LowGQX END=201778735 GT ./. chr2 201784943 . A . . LowGQX END=201785119 GT ./. chr2 201785714 . A . . LowGQX END=201785865 GT ./. chr2 201790557 . A . . LowGQX END=201790658 GT ./. chr2 201791489 . A . . LowGQX END=201791626 GT ./. chr2 201796000 . A . . LowGQX END=201796219 GT ./. chr2 201798597 . A . . LowGQX END=201798700 GT ./. chr2 201800420 . A . . LowGQX END=201800618 GT ./. chr2 201802557 . T . . LowGQX END=201802710 GT ./. chr2 201805937 . C . . LowGQX END=201806037 GT ./. chr2 201807405 . T . . LowGQX END=201807505 GT ./. chr2 201814215 . T . . LowGQX END=201814372 GT ./. chr2 201822122 . A . . LowGQX END=201822270 GT ./. chr2 201822750 . T . . LowGQX END=201822850 GT ./. chr2 201845991 . A . . LowGQX END=201846597 GT ./. chr2 201852088 . C . . LowGQX END=201852256 GT ./. chr2 201852983 . A . . LowGQX END=201853147 GT ./. chr2 201856998 . A . . LowGQX END=201857152 GT ./. chr2 201857608 . A . . LowGQX END=201857729 GT ./. chr2 201862164 . T . . LowGQX END=201862266 GT ./. chr2 201873694 . A . . LowGQX END=201873814 GT ./. chr2 201876053 . T . . LowGQX END=201876206 GT ./. chr2 201881712 . A . . LowGQX END=201881896 GT ./. chr2 201886760 . C . . LowGQX END=201886860 GT ./. chr2 201887552 . A . . LowGQX END=201887658 GT ./. chr2 201888658 . A . . LowGQX END=201888758 GT ./. chr2 201943564 . A . . LowGQX END=201943748 GT ./. chr2 201950180 . A . . LowGQX END=201950341 GT ./. chr2 201994587 . G . . LowGQX END=201994872 GT ./. chr2 201997750 . A . . LowGQX END=201997860 GT ./. chr2 202000693 . A . . LowGQX END=202000833 GT ./. chr2 202000920 . G . . LowGQX END=202001151 GT ./. chr2 202005018 . T . . LowGQX END=202005172 GT ./. chr2 202006077 . T . . LowGQX END=202006177 GT ./. chr2 202007368 . G . . LowGQX END=202007537 GT ./. chr2 202010079 . A . . LowGQX END=202010179 GT ./. chr2 202013701 . A . . LowGQX END=202013801 GT ./. chr2 202014468 . C . . LowGQX END=202014568 GT ./. chr2 202018798 . T . . LowGQX END=202018953 GT ./. chr2 202025153 . A . . LowGQX END=202025668 GT ./. chr2 202027711 . T . . LowGQX END=202027811 GT ./. chr2 202028556 . A . . LowGQX END=202028699 GT ./. chr2 202050450 . T . . LowGQX END=202050899 GT ./. chr2 202052378 . T . . LowGQX END=202052574 GT ./. chr2 202057656 . G . . LowGQX END=202057894 GT ./. chr2 202060514 . C . . LowGQX END=202060713 GT ./. chr2 202065146 . G . . LowGQX END=202065246 GT ./. chr2 202068402 . C . . LowGQX END=202068541 GT ./. chr2 202070554 . A . . LowGQX END=202070748 GT ./. chr2 202072747 . T . . LowGQX END=202072958 GT ./. chr2 202073742 . T . . LowGQX END=202074337 GT ./. chr2 202082260 . C . . LowGQX END=202082516 GT ./. chr2 202093605 . G . . LowGQX END=202093858 GT ./. chr2 202122904 . T . . LowGQX END=202123157 GT ./. chr2 202131133 . G . . LowGQX END=202131566 GT ./. chr2 202134182 . G . . LowGQX END=202134380 GT ./. chr2 202136188 . G . . LowGQX END=202136396 GT ./. chr2 202137310 . A . . LowGQX END=202137717 GT ./. chr2 202139561 . G . . LowGQX END=202139728 GT ./. chr2 202141499 . C . . LowGQX END=202141743 GT ./. chr2 202142374 . T . . LowGQX END=202142537 GT ./. chr2 202146522 . A . . LowGQX END=202146622 GT ./. chr2 202149488 . G . . LowGQX END=202150092 GT ./. chr2 202151131 . A . . LowGQX END=202151369 GT ./. chr2 202153376 . G . . LowGQX END=202153507 GT ./. chr2 202154178 . A . . LowGQX END=202154292 GT ./. chr2 202154417 . A . . LowGQX END=202154580 GT ./. chr2 202163943 . A . . LowGQX END=202164043 GT ./. chr2 202172240 . A . . LowGQX END=202172348 GT ./. chr2 202173872 . A . . LowGQX END=202173976 GT ./. chr2 202195170 . C . . LowGQX END=202195270 GT ./. chr2 202195457 . A . . LowGQX END=202195559 GT ./. chr2 202207074 . T . . LowGQX END=202207174 GT ./. chr2 202208890 . C . . LowGQX END=202209041 GT ./. chr2 202211263 . A . . LowGQX END=202211401 GT ./. chr2 202212952 . A . . LowGQX END=202213052 GT ./. chr2 202215420 . A . . LowGQX END=202215520 GT ./. chr2 202216013 . A . . LowGQX END=202216130 GT ./. chr2 202245264 . C . . LowGQX END=202245944 GT ./. chr2 202248832 . A . . LowGQX END=202248992 GT ./. chr2 202250939 . A . . LowGQX END=202251210 GT ./. chr2 202252424 . A . . LowGQX END=202252727 GT ./. chr2 202252735 . A . . LowGQX END=202252835 GT ./. chr2 202254021 . A . . LowGQX END=202254229 GT ./. chr2 202254514 . C . . LowGQX END=202254614 GT ./. chr2 202257630 . A . . LowGQX END=202257772 GT ./. chr2 202259509 . A . . LowGQX END=202259609 GT ./. chr2 202260000 . C . . LowGQX END=202260170 GT ./. chr2 202262215 . T . . LowGQX END=202262315 GT ./. chr2 202262866 . A . . LowGQX END=202263080 GT ./. chr2 202264098 . A . . LowGQX END=202264219 GT ./. chr2 202265730 . G . . LowGQX END=202265830 GT ./. chr2 202272114 . A . . LowGQX END=202272323 GT ./. chr2 202285136 . T . . LowGQX END=202285236 GT ./. chr2 202319520 . A . . LowGQX END=202319620 GT ./. chr2 202323498 . G . . LowGQX END=202323598 GT ./. chr2 202325471 . C . . LowGQX END=202325571 GT ./. chr2 202334674 . A . . LowGQX END=202334778 GT ./. chr2 202337676 . A . . LowGQX END=202337846 GT ./. chr2 202339318 . A . . LowGQX END=202339481 GT ./. chr2 202340290 . G . . LowGQX END=202340468 GT ./. chr2 202342340 . A . . LowGQX END=202342516 GT ./. chr2 202342808 . A . . LowGQX END=202342917 GT ./. chr2 202343078 . A . . LowGQX END=202343327 GT ./. chr2 202344130 . C . . LowGQX END=202344284 GT ./. chr2 202344691 . T . . LowGQX END=202344901 GT ./. chr2 202352333 . T . . LowGQX END=202352628 GT ./. chr2 202355891 . C . . LowGQX END=202359483 GT ./. chr2 202360546 . A . . LowGQX END=202360706 GT ./. chr2 202400596 . G . . LowGQX END=202401046 GT ./. chr2 202402131 . T . . LowGQX END=202402231 GT ./. chr2 202410204 . T . . LowGQX END=202410356 GT ./. chr2 202412176 . T . . LowGQX END=202412336 GT ./. chr2 202430450 . A . . LowGQX END=202430598 GT ./. chr2 202436654 . A . . LowGQX END=202436754 GT ./. chr2 202438917 . A . . LowGQX END=202439017 GT ./. chr2 202439978 . C . . LowGQX END=202440078 GT ./. chr2 202446766 . A . . LowGQX END=202446943 GT ./. chr2 202466430 . A . . LowGQX END=202466610 GT ./. chr2 202467923 . T . . LowGQX END=202468023 GT ./. chr2 202469328 . A . . LowGQX END=202469428 GT ./. chr2 202483621 . A . . LowGQX END=202483856 GT ./. chr2 202488962 . C . . LowGQX END=202489062 GT ./. chr2 202490748 . C . . LowGQX END=202490871 GT ./. chr2 202492041 . T . . LowGQX END=202492141 GT ./. chr2 202492786 . A . . LowGQX END=202492886 GT ./. chr2 202493952 . C . . LowGQX END=202494145 GT ./. chr2 202494451 . C . . LowGQX END=202494621 GT ./. chr2 202496773 . C . . LowGQX END=202496932 GT ./. chr2 202497983 . A . . LowGQX END=202498155 GT ./. chr2 202499560 . C . . LowGQX END=202499660 GT ./. chr2 202501430 . C . . LowGQX END=202501609 GT ./. chr2 202503693 . A . . LowGQX END=202503793 GT ./. chr2 202504936 . A . . LowGQX END=202505036 GT ./. chr2 202505582 . G . . LowGQX END=202505682 GT ./. chr2 202507306 . A . . LowGQX END=202507479 GT ./. chr2 202507993 . T . . LowGQX END=202508153 GT ./. chr2 202509932 . C . . LowGQX END=202510128 GT ./. chr2 202512413 . C . . LowGQX END=202512549 GT ./. chr2 202514298 . C . . LowGQX END=202514408 GT ./. chr2 202514792 . T . . LowGQX END=202514944 GT ./. chr2 202519550 . C . . LowGQX END=202519650 GT ./. chr2 202520920 . C . . LowGQX END=202521092 GT ./. chr2 202523119 . G . . LowGQX END=202523273 GT ./. chr2 202525012 . A . . LowGQX END=202525112 GT ./. chr2 202526131 . T . . LowGQX END=202526231 GT ./. chr2 202526236 . C . . LowGQX END=202526336 GT ./. chr2 202526751 . C . . LowGQX END=202526851 GT ./. chr2 202528764 . A . . LowGQX END=202528864 GT ./. chr2 202528981 . T . . LowGQX END=202529081 GT ./. chr2 202530976 . G . . LowGQX END=202531127 GT ./. chr2 202531319 . C . . LowGQX END=202531480 GT ./. chr2 202534415 . A . . LowGQX END=202534515 GT ./. chr2 202538159 . G . . LowGQX END=202538319 GT ./. chr2 202539755 . C . . LowGQX END=202539855 GT ./. chr2 202539912 . G . . LowGQX END=202540012 GT ./. chr2 202545557 . T . . LowGQX END=202545758 GT ./. chr2 202546205 . C . . LowGQX END=202546305 GT ./. chr2 202547547 . G . . LowGQX END=202547647 GT ./. chr2 202549778 . C . . LowGQX END=202549878 GT ./. chr2 202550641 . C . . LowGQX END=202550774 GT ./. chr2 202552002 . G . . LowGQX END=202552102 GT ./. chr2 202554914 . A . . LowGQX END=202555014 GT ./. chr2 202557580 . T . . LowGQX END=202557753 GT ./. chr2 202558597 . A . . LowGQX END=202558697 GT ./. chr2 202563220 . A . . LowGQX END=202563371 GT ./. chr2 202566523 . G . . LowGQX END=202566664 GT ./. chr2 202568794 . A . . LowGQX END=202568993 GT ./. chr2 202569126 . C . . LowGQX END=202569378 GT ./. chr2 202569811 . A . . LowGQX END=202569975 GT ./. chr2 202570088 . C . . LowGQX END=202570236 GT ./. chr2 202571518 . T . . LowGQX END=202571797 GT ./. chr2 202572541 . T . . LowGQX END=202572766 GT ./. chr2 202574553 . G . . LowGQX END=202574813 GT ./. chr2 202575663 . G . . LowGQX END=202575883 GT ./. chr2 202580344 . G . . LowGQX END=202580614 GT ./. chr2 202582749 . G . . LowGQX END=202582985 GT ./. chr2 202584755 . A . . LowGQX END=202584907 GT ./. chr2 202587710 . A . . LowGQX END=202587895 GT ./. chr2 202588002 . C . . LowGQX END=202588216 GT ./. chr2 202588967 . T . . LowGQX END=202589234 GT ./. chr2 202590028 . A . . LowGQX END=202590229 GT ./. chr2 202591156 . A . . LowGQX END=202591324 GT ./. chr2 202591336 . T . . LowGQX END=202591641 GT ./. chr2 202591884 . G . . LowGQX END=202592053 GT ./. chr2 202592377 . C . . LowGQX END=202592550 GT ./. chr2 202593184 . G . . LowGQX END=202593415 GT ./. chr2 202593724 . C . . LowGQX END=202593958 GT ./. chr2 202597948 . C . . LowGQX END=202598213 GT ./. chr2 202603342 . A . . LowGQX END=202603510 GT ./. chr2 202606303 . C . . LowGQX END=202606629 GT ./. chr2 202608930 . G . . LowGQX END=202609204 GT ./. chr2 202611238 . G . . LowGQX END=202611523 GT ./. chr2 202614384 . T . . LowGQX END=202614564 GT ./. chr2 202617818 . T . . LowGQX END=202618017 GT ./. chr2 202619175 . G . . LowGQX END=202619446 GT ./. chr2 202622074 . G . . LowGQX END=202622534 GT ./. chr2 202625525 . C . . LowGQX END=202626593 GT ./. chr2 202631901 . G . . LowGQX END=202632158 GT ./. chr2 202633538 . G . . LowGQX END=202633669 GT ./. chr2 202671387 . T . . LowGQX END=202671511 GT ./. chr2 202672216 . G . . LowGQX END=202672369 GT ./. chr2 202672576 . A . . LowGQX END=202672678 GT ./. chr2 202677196 . T . . LowGQX END=202677296 GT ./. chr2 202687530 . A . . LowGQX END=202687630 GT ./. chr2 202688370 . C . . LowGQX END=202688470 GT ./. chr2 202698569 . A . . LowGQX END=202698697 GT ./. chr2 202700364 . A . . LowGQX END=202700489 GT ./. chr2 202712101 . T . . LowGQX END=202712201 GT ./. chr2 202719579 . T . . LowGQX END=202719679 GT ./. chr2 202725460 . C . . LowGQX END=202725560 GT ./. chr2 202736976 . T . . LowGQX END=202737076 GT ./. chr2 202741216 . C . . LowGQX END=202741316 GT ./. chr2 202744749 . A . . LowGQX END=202744893 GT ./. chr2 202753135 . T . . LowGQX END=202753235 GT ./. chr2 202755506 . A . . LowGQX END=202755620 GT ./. chr2 202899369 . C . . LowGQX END=202901098 GT ./. chr2 202938343 . A . . LowGQX END=202938443 GT ./. chr2 202939613 . G . . LowGQX END=202939899 GT ./. chr2 202941654 . G . . LowGQX END=202941823 GT ./. chr2 202955492 . G . . LowGQX END=202955653 GT ./. chr2 202957752 . G . . LowGQX END=202957909 GT ./. chr2 202962157 . G . . LowGQX END=202962301 GT ./. chr2 202964335 . G . . LowGQX END=202964520 GT ./. chr2 202965029 . G . . LowGQX END=202965173 GT ./. chr2 202967668 . G . . LowGQX END=202967838 GT ./. chr2 202970483 . G . . LowGQX END=202970739 GT ./. chr2 202974335 . G . . LowGQX END=202974513 GT ./. chr2 202978058 . G . . LowGQX END=202978170 GT ./. chr2 202989921 . T . . LowGQX END=202990021 GT ./. chr2 202990538 . C . . LowGQX END=202990638 GT ./. chr2 203000735 . T . . LowGQX END=203000835 GT ./. chr2 203003100 . A . . LowGQX END=203003232 GT ./. chr2 203019396 . G . . LowGQX END=203019534 GT ./. chr2 203029994 . G . . LowGQX END=203030094 GT ./. chr2 203049472 . A . . LowGQX END=203049572 GT ./. chr2 203051656 . G . . LowGQX END=203051822 GT ./. chr2 203052875 . G . . LowGQX END=203052990 GT ./. chr2 203054897 . G . . LowGQX END=203055217 GT ./. chr2 203058024 . G . . LowGQX END=203058227 GT ./. chr2 203058913 . C . . LowGQX END=203059086 GT ./. chr2 203061523 . A . . LowGQX END=203061774 GT ./. chr2 203071961 . A . . LowGQX END=203072061 GT ./. chr2 203072559 . G . . LowGQX END=203072726 GT ./. chr2 203075444 . A . . LowGQX END=203075544 GT ./. chr2 203079009 . T . . LowGQX END=203079228 GT ./. chr2 203084743 . A . . LowGQX END=203084843 GT ./. chr2 203096266 . T . . LowGQX END=203096466 GT ./. chr2 203103059 . G . . LowGQX END=203103219 GT ./. chr2 203130638 . C . . LowGQX END=203130738 GT ./. chr2 203139774 . A . . LowGQX END=203139925 GT ./. chr2 203141148 . A . . LowGQX END=203141248 GT ./. chr2 203142650 . A . . LowGQX END=203142750 GT ./. chr2 203142900 . C . . LowGQX END=203143000 GT ./. chr2 203147072 . A . . LowGQX END=203147198 GT ./. chr2 203149066 . A . . LowGQX END=203149209 GT ./. chr2 203152366 . T . . LowGQX END=203152466 GT ./. chr2 203155044 . A . . LowGQX END=203155183 GT ./. chr2 203155846 . A . . LowGQX END=203155996 GT ./. chr2 203157498 . A . . LowGQX END=203157629 GT ./. chr2 203157766 . A . . LowGQX END=203157866 GT ./. chr2 203160395 . A . . LowGQX END=203160563 GT ./. chr2 203162100 . A . . LowGQX END=203162239 GT ./. chr2 203162549 . T . . LowGQX END=203162649 GT ./. chr2 203164915 . G . . LowGQX END=203165093 GT ./. chr2 203167642 . A . . LowGQX END=203167783 GT ./. chr2 203168085 . A . . LowGQX END=203168185 GT ./. chr2 203242146 . C . . LowGQX END=203242325 GT ./. chr2 203329481 . T . . LowGQX END=203329754 GT ./. chr2 203332191 . T . . LowGQX END=203332464 GT ./. chr2 203334190 . T . . LowGQX END=203334290 GT ./. chr2 203378391 . C . . LowGQX END=203378604 GT ./. chr2 203379560 . T . . LowGQX END=203379754 GT ./. chr2 203383494 . T . . LowGQX END=203383827 GT ./. chr2 203384759 . A . . LowGQX END=203384976 GT ./. chr2 203395466 . G . . LowGQX END=203395729 GT ./. chr2 203397257 . T . . LowGQX END=203397507 GT ./. chr2 203406983 . T . . LowGQX END=203407222 GT ./. chr2 203417388 . T . . LowGQX END=203417663 GT ./. chr2 203419924 . G . . LowGQX END=203421306 GT ./. chr2 203424368 . T . . LowGQX END=203424721 GT ./. chr2 203499899 . A . . LowGQX END=203500519 GT ./. chr2 203560603 . G . . LowGQX END=203560758 GT ./. chr2 203589638 . A . . LowGQX END=203589757 GT ./. chr2 203590971 . A . . LowGQX END=203591089 GT ./. chr2 203620259 . A . . LowGQX END=203620407 GT ./. chr2 203621934 . A . . LowGQX END=203622164 GT ./. chr2 203623954 . A . . LowGQX END=203624079 GT ./. chr2 203630167 . A . . LowGQX END=203630490 GT ./. chr2 203644254 . A . . LowGQX END=203644374 GT ./. chr2 203650636 . C . . LowGQX END=203650736 GT ./. chr2 203651412 . G . . LowGQX END=203651512 GT ./. chr2 203653481 . C . . LowGQX END=203653821 GT ./. chr2 203661601 . A . . LowGQX END=203661701 GT ./. chr2 203676441 . T . . LowGQX END=203676541 GT ./. chr2 203679417 . C . . LowGQX END=203679517 GT ./. chr2 203680632 . A . . LowGQX END=203680735 GT ./. chr2 203682139 . A . . LowGQX END=203682269 GT ./. chr2 203684417 . T . . LowGQX END=203684625 GT ./. chr2 203686079 . A . . LowGQX END=203686207 GT ./. chr2 203690398 . A . . LowGQX END=203690498 GT ./. chr2 203693538 . G . . LowGQX END=203693735 GT ./. chr2 203745572 . A . . LowGQX END=203745672 GT ./. chr2 203747421 . A . . LowGQX END=203747521 GT ./. chr2 203748330 . A . . LowGQX END=203748467 GT ./. chr2 203748919 . A . . LowGQX END=203749029 GT ./. chr2 203749116 . A . . LowGQX END=203749261 GT ./. chr2 203757333 . T . . LowGQX END=203757433 GT ./. chr2 203759277 . T . . LowGQX END=203759377 GT ./. chr2 203760786 . A . . LowGQX END=203760945 GT ./. chr2 203761961 . A . . LowGQX END=203762141 GT ./. chr2 203764252 . A . . LowGQX END=203764363 GT ./. chr2 203765746 . A . . LowGQX END=203765846 GT ./. chr2 203772586 . A . . LowGQX END=203772686 GT ./. chr2 203776130 . A . . LowGQX END=203776230 GT ./. chr2 203782696 . C . . LowGQX END=203782796 GT ./. chr2 203806615 . A . . LowGQX END=203806715 GT ./. chr2 203807461 . A . . LowGQX END=203807693 GT ./. chr2 203817280 . A . . LowGQX END=203817405 GT ./. chr2 203818726 . A . . LowGQX END=203818860 GT ./. chr2 203820390 . A . . LowGQX END=203820490 GT ./. chr2 203825958 . A . . LowGQX END=203826248 GT ./. chr2 203831699 . A . . LowGQX END=203831824 GT ./. chr2 203834640 . A . . LowGQX END=203834820 GT ./. chr2 203836226 . A . . LowGQX END=203836464 GT ./. chr2 203838103 . T . . LowGQX END=203838263 GT ./. chr2 203839055 . A . . LowGQX END=203839245 GT ./. chr2 203841974 . T . . LowGQX END=203842074 GT ./. chr2 203846276 . A . . LowGQX END=203846411 GT ./. chr2 203846783 . T . . LowGQX END=203847173 GT ./. chr2 203848227 . A . . LowGQX END=203848407 GT ./. chr2 203881083 . T . . LowGQX END=203881183 GT ./. chr2 203906484 . T . . LowGQX END=203906584 GT ./. chr2 203914536 . G . . LowGQX END=203914699 GT ./. chr2 203921089 . C . . LowGQX END=203921241 GT ./. chr2 203922048 . G . . LowGQX END=203922177 GT ./. chr2 203926941 . T . . LowGQX END=203927096 GT ./. chr2 203933107 . T . . LowGQX END=203933207 GT ./. chr2 203942414 . A . . LowGQX END=203942568 GT ./. chr2 203947941 . G . . LowGQX END=203948249 GT ./. chr2 203949185 . G . . LowGQX END=203949293 GT ./. chr2 203964344 . C . . LowGQX END=203964444 GT ./. chr2 203972142 . G . . LowGQX END=203972242 GT ./. chr2 203972330 . G . . LowGQX END=203972912 GT ./. chr2 203974872 . G . . LowGQX END=203975006 GT ./. chr2 203976651 . C . . LowGQX END=203976822 GT ./. chr2 203977737 . G . . LowGQX END=203978042 GT ./. chr2 203980701 . T . . LowGQX END=203980801 GT ./. chr2 203986972 . C . . LowGQX END=203987126 GT ./. chr2 203990074 . G . . LowGQX END=203990244 GT ./. chr2 203990682 . G . . LowGQX END=203990862 GT ./. chr2 203991279 . G . . LowGQX END=203991440 GT ./. chr2 203991546 . G . . LowGQX END=203991650 GT ./. chr2 203992503 . G . . LowGQX END=203992693 GT ./. chr2 203995010 . T . . LowGQX END=203995200 GT ./. chr2 203996695 . G . . LowGQX END=203996856 GT ./. chr2 203997720 . A . . LowGQX END=203997875 GT ./. chr2 204000399 . G . . LowGQX END=204000978 GT ./. chr2 204001320 . A . . LowGQX END=204001500 GT ./. chr2 204002883 . A . . LowGQX END=204003041 GT ./. chr2 204003341 . A . . LowGQX END=204003474 GT ./. chr2 204009321 . A . . LowGQX END=204009631 GT ./. chr2 204009732 . A . . LowGQX END=204009886 GT ./. chr2 204013712 . A . . LowGQX END=204013874 GT ./. chr2 204016186 . A . . LowGQX END=204016315 GT ./. chr2 204022420 . A . . LowGQX END=204022551 GT ./. chr2 204030870 . A . . LowGQX END=204031060 GT ./. chr2 204031948 . A . . LowGQX END=204032086 GT ./. chr2 204034468 . A . . LowGQX END=204034628 GT ./. chr2 204036649 . A . . LowGQX END=204036749 GT ./. chr2 204037450 . A . . LowGQX END=204037579 GT ./. chr2 204039868 . A . . LowGQX END=204040048 GT ./. chr2 204045063 . A . . LowGQX END=204045238 GT ./. chr2 204048000 . A . . LowGQX END=204048114 GT ./. chr2 204053193 . A . . LowGQX END=204053315 GT ./. chr2 204055013 . A . . LowGQX END=204055115 GT ./. chr2 204058516 . A . . LowGQX END=204058637 GT ./. chr2 204062020 . T . . LowGQX END=204062120 GT ./. chr2 204064059 . A . . LowGQX END=204064173 GT ./. chr2 204066264 . A . . LowGQX END=204066441 GT ./. chr2 204067348 . C . . LowGQX END=204067508 GT ./. chr2 204073308 . A . . LowGQX END=204073479 GT ./. chr2 204073882 . A . . LowGQX END=204074048 GT ./. chr2 204075679 . A . . LowGQX END=204075832 GT ./. chr2 204078239 . A . . LowGQX END=204078419 GT ./. chr2 204081974 . A . . LowGQX END=204082080 GT ./. chr2 204090810 . T . . LowGQX END=204090910 GT ./. chr2 204103772 . T . . LowGQX END=204103872 GT ./. chr2 204110544 . T . . LowGQX END=204110644 GT ./. chr2 204111476 . A . . LowGQX END=204111647 GT ./. chr2 204116688 . A . . LowGQX END=204116835 GT ./. chr2 204131235 . A . . LowGQX END=204131407 GT ./. chr2 204137368 . G . . LowGQX END=204137474 GT ./. chr2 204143294 . A . . LowGQX END=204143414 GT ./. chr2 204144760 . T . . LowGQX END=204144860 GT ./. chr2 204150333 . A . . LowGQX END=204150458 GT ./. chr2 204154486 . A . . LowGQX END=204154602 GT ./. chr2 204156968 . A . . LowGQX END=204157068 GT ./. chr2 204161192 . T . . LowGQX END=204161292 GT ./. chr2 204161479 . A . . LowGQX END=204161634 GT ./. chr2 204193186 . C . . LowGQX END=204193357 GT ./. chr2 204206887 . A . . LowGQX END=204206987 GT ./. chr2 204216222 . C . . LowGQX END=204216386 GT ./. chr2 204219857 . G . . LowGQX END=204219957 GT ./. chr2 204231598 . A . . LowGQX END=204231770 GT ./. chr2 204239510 . T . . LowGQX END=204239610 GT ./. chr2 204240739 . A . . LowGQX END=204240856 GT ./. chr2 204244929 . A . . LowGQX END=204245110 GT ./. chr2 204246871 . T . . LowGQX END=204246971 GT ./. chr2 204255708 . T . . LowGQX END=204255869 GT ./. chr2 204259421 . A . . LowGQX END=204259572 GT ./. chr2 204259758 . A . . LowGQX END=204259858 GT ./. chr2 204260377 . A . . LowGQX END=204260506 GT ./. chr2 204261507 . G . . LowGQX END=204261691 GT ./. chr2 204267297 . A . . LowGQX END=204267460 GT ./. chr2 204275942 . T . . LowGQX END=204276102 GT ./. chr2 204281629 . A . . LowGQX END=204281807 GT ./. chr2 204291898 . A . . LowGQX END=204292078 GT ./. chr2 204302841 . T . . LowGQX END=204302941 GT ./. chr2 204304158 . G . . LowGQX END=204306139 GT ./. chr2 204306753 . C . . LowGQX END=204306853 GT ./. chr2 204309572 . A . . LowGQX END=204309736 GT ./. chr2 204312680 . A . . LowGQX END=204312805 GT ./. chr2 204313459 . G . . LowGQX END=204313562 GT ./. chr2 204319151 . A . . LowGQX END=204319266 GT ./. chr2 204320158 . A . . LowGQX END=204320306 GT ./. chr2 204322181 . G . . LowGQX END=204322336 GT ./. chr2 204324578 . A . . LowGQX END=204324754 GT ./. chr2 204325970 . A . . LowGQX END=204326134 GT ./. chr2 204326560 . C . . LowGQX END=204326660 GT ./. chr2 204334950 . A . . LowGQX END=204335050 GT ./. chr2 204341790 . A . . LowGQX END=204341890 GT ./. chr2 204354305 . A . . LowGQX END=204354815 GT ./. chr2 204355935 . A . . LowGQX END=204356045 GT ./. chr2 204359955 . A . . LowGQX END=204360079 GT ./. chr2 204571244 . A . . LowGQX END=204571344 GT ./. chr2 204571396 . C . . LowGQX END=204571496 GT ./. chr2 204591354 . A . . LowGQX END=204591715 GT ./. chr2 204594369 . A . . LowGQX END=204594498 GT ./. chr2 204599465 . C . . LowGQX END=204599638 GT ./. chr2 204732664 . C . . LowGQX END=204732777 GT ./. chr2 204735307 . A . . LowGQX END=204735659 GT ./. chr2 204736099 . A . . LowGQX END=204736213 GT ./. chr2 204737429 . A . . LowGQX END=204737538 GT ./. chr2 204801487 . C . . LowGQX END=204801637 GT ./. chr2 204820308 . G . . LowGQX END=204820746 GT ./. chr2 204821331 . A . . LowGQX END=204821540 GT ./. chr2 204822471 . A . . LowGQX END=204822659 GT ./. chr2 204824226 . A . . LowGQX END=204824374 GT ./. chr2 205410701 . G . . LowGQX END=205410895 GT ./. chr2 205550902 . A . . LowGQX END=205551008 GT ./. chr2 205829873 . A . . LowGQX END=205830073 GT ./. chr2 205912302 . A . . LowGQX END=205912416 GT ./. chr2 205969145 . T . . LowGQX END=205969245 GT ./. chr2 205978209 . C . . LowGQX END=205978309 GT ./. chr2 205983643 . A . . LowGQX END=205983773 GT ./. chr2 205986313 . A . . LowGQX END=205986676 GT ./. chr2 205989049 . A . . LowGQX END=205989193 GT ./. chr2 205990331 . A . . LowGQX END=205990464 GT ./. chr2 206023444 . A . . LowGQX END=206023644 GT ./. chr2 206036933 . A . . LowGQX END=206037108 GT ./. chr2 206041167 . A . . LowGQX END=206041304 GT ./. chr2 206050486 . A . . LowGQX END=206050590 GT ./. chr2 206057927 . A . . LowGQX END=206058047 GT ./. chr2 206110475 . C . . LowGQX END=206110575 GT ./. chr2 206165252 . A . . LowGQX END=206165463 GT ./. chr2 206166186 . A . . LowGQX END=206166475 GT ./. chr2 206166503 . A . . LowGQX END=206166632 GT ./. chr2 206265735 . A . . LowGQX END=206265850 GT ./. chr2 206305092 . A . . LowGQX END=206305399 GT ./. chr2 206364618 . A . . LowGQX END=206364758 GT ./. chr2 206418038 . C . . LowGQX END=206418138 GT ./. chr2 206480178 . A . . LowGQX END=206480540 GT ./. chr2 206547964 . T . . LowGQX END=206548139 GT ./. chr2 206562217 . A . . LowGQX END=206562497 GT ./. chr2 206565405 . T . . LowGQX END=206565505 GT ./. chr2 206580866 . C . . LowGQX END=206581150 GT ./. chr2 206587151 . C . . LowGQX END=206587484 GT ./. chr2 206588458 . C . . LowGQX END=206588716 GT ./. chr2 206590586 . G . . LowGQX END=206590858 GT ./. chr2 206592564 . C . . LowGQX END=206592822 GT ./. chr2 206605192 . T . . LowGQX END=206605439 GT ./. chr2 206607876 . G . . LowGQX END=206608304 GT ./. chr2 206610419 . A . . LowGQX END=206610666 GT ./. chr2 206614398 . T . . LowGQX END=206614617 GT ./. chr2 206617508 . T . . LowGQX END=206617751 GT ./. chr2 206628347 . G . . LowGQX END=206628712 GT ./. chr2 206630147 . T . . LowGQX END=206630346 GT ./. chr2 206630369 . A . . LowGQX END=206630469 GT ./. chr2 206631445 . C . . LowGQX END=206631594 GT ./. chr2 206632099 . C . . LowGQX END=206632199 GT ./. chr2 206640826 . T . . LowGQX END=206641302 GT ./. chr2 206656906 . G . . LowGQX END=206657051 GT ./. chr2 206659423 . C . . LowGQX END=206659834 GT ./. chr2 206869091 . C . . LowGQX END=206870258 GT ./. chr2 206871977 . C . . LowGQX END=206872166 GT ./. chr2 206874300 . C . . LowGQX END=206874519 GT ./. chr2 206882403 . C . . LowGQX END=206882538 GT ./. chr2 206884459 . C . . LowGQX END=206884570 GT ./. chr2 206892834 . C . . LowGQX END=206893060 GT ./. chr2 206911227 . C . . LowGQX END=206911337 GT ./. chr2 206920921 . C . . LowGQX END=206921668 GT ./. chr2 206927452 . A . . LowGQX END=206927802 GT ./. chr2 206988858 . T . . LowGQX END=206989052 GT ./. chr2 206991212 . G . . LowGQX END=206991620 GT ./. chr2 206992470 . T . . LowGQX END=206992748 GT ./. chr2 206994761 . A . . LowGQX END=206995018 GT ./. chr2 206997618 . A . . LowGQX END=206997881 GT ./. chr2 207003158 . A . . LowGQX END=207003390 GT ./. chr2 207006614 . C . . LowGQX END=207006845 GT ./. chr2 207007359 . T . . LowGQX END=207007607 GT ./. chr2 207008691 . G . . LowGQX END=207008908 GT ./. chr2 207009565 . A . . LowGQX END=207009802 GT ./. chr2 207011576 . A . . LowGQX END=207011864 GT ./. chr2 207012204 . A . . LowGQX END=207012610 GT ./. chr2 207013693 . T . . LowGQX END=207013872 GT ./. chr2 207014486 . A . . LowGQX END=207014701 GT ./. chr2 207017092 . T . . LowGQX END=207017286 GT ./. chr2 207018291 . T . . LowGQX END=207018480 GT ./. chr2 207023809 . T . . LowGQX END=207023909 GT ./. chr2 207024694 . A . . LowGQX END=207024794 GT ./. chr2 207025281 . G . . LowGQX END=207025437 GT ./. chr2 207025562 . A . . LowGQX END=207025662 GT ./. chr2 207026068 . A . . LowGQX END=207026199 GT ./. chr2 207026590 . T . . LowGQX END=207026690 GT ./. chr2 207026746 . T . . LowGQX END=207026846 GT ./. chr2 207026952 . T . . LowGQX END=207027084 GT ./. chr2 207027211 . A . . LowGQX END=207027341 GT ./. chr2 207027451 . A . . LowGQX END=207027610 GT ./. chr2 207040902 . A . . LowGQX END=207041974 GT ./. chr2 207146503 . C . . LowGQX END=207146654 GT ./. chr2 207161969 . G . . LowGQX END=207162098 GT ./. chr2 207169440 . G . . LowGQX END=207176318 GT ./. chr2 207308518 . C . . LowGQX END=207308868 GT ./. chr2 207310029 . A . . LowGQX END=207310251 GT ./. chr2 207345945 . T . . LowGQX END=207346045 GT ./. chr2 207395591 . A . . LowGQX END=207395691 GT ./. chr2 207406768 . C . . LowGQX END=207406868 GT ./. chr2 207407959 . T . . LowGQX END=207408059 GT ./. chr2 207412140 . T . . LowGQX END=207412240 GT ./. chr2 207412992 . T . . LowGQX END=207413092 GT ./. chr2 207414802 . A . . LowGQX END=207414902 GT ./. chr2 207422137 . T . . LowGQX END=207422237 GT ./. chr2 207424677 . A . . LowGQX END=207424845 GT ./. chr2 207425845 . T . . LowGQX END=207425945 GT ./. chr2 207426923 . A . . LowGQX END=207427023 GT ./. chr2 207429719 . T . . LowGQX END=207429819 GT ./. chr2 207431945 . A . . LowGQX END=207432049 GT ./. chr2 207435450 . C . . LowGQX END=207435550 GT ./. chr2 207436446 . T . . LowGQX END=207436546 GT ./. chr2 207437830 . G . . LowGQX END=207437930 GT ./. chr2 207451967 . A . . LowGQX END=207452125 GT ./. chr2 207452797 . G . . LowGQX END=207452897 GT ./. chr2 207454131 . A . . LowGQX END=207454241 GT ./. chr2 207457339 . A . . LowGQX END=207457463 GT ./. chr2 207459459 . A . . LowGQX END=207459632 GT ./. chr2 207460723 . T . . LowGQX END=207460889 GT ./. chr2 207470452 . A . . LowGQX END=207470609 GT ./. chr2 207472655 . T . . LowGQX END=207472755 GT ./. chr2 207474572 . T . . LowGQX END=207474730 GT ./. chr2 207482301 . A . . LowGQX END=207482443 GT ./. chr2 207508960 . C . . LowGQX END=207509373 GT ./. chr2 207513344 . T . . LowGQX END=207513519 GT ./. chr2 207516541 . T . . LowGQX END=207516646 GT ./. chr2 207527626 . C . . LowGQX END=207528120 GT ./. chr2 207530593 . C . . LowGQX END=207530754 GT ./. chr2 207557898 . C . . LowGQX END=207558048 GT ./. chr2 207559489 . C . . LowGQX END=207559602 GT ./. chr2 207564450 . C . . LowGQX END=207564615 GT ./. chr2 207564855 . T . . LowGQX END=207564955 GT ./. chr2 207569566 . C . . LowGQX END=207569668 GT ./. chr2 207570505 . A . . LowGQX END=207570605 GT ./. chr2 207572025 . C . . LowGQX END=207572228 GT ./. chr2 207575177 . T . . LowGQX END=207575335 GT ./. chr2 207582944 . T . . LowGQX END=207583044 GT ./. chr2 207603115 . A . . LowGQX END=207603272 GT ./. chr2 207604302 . T . . LowGQX END=207604402 GT ./. chr2 207605754 . T . . LowGQX END=207605854 GT ./. chr2 207606015 . A . . LowGQX END=207606115 GT ./. chr2 207610039 . G . . LowGQX END=207610139 GT ./. chr2 207610322 . A . . LowGQX END=207610422 GT ./. chr2 207611009 . A . . LowGQX END=207611153 GT ./. chr2 207613742 . A . . LowGQX END=207613910 GT ./. chr2 207615656 . A . . LowGQX END=207615802 GT ./. chr2 207619731 . A . . LowGQX END=207620232 GT ./. chr2 207621620 . A . . LowGQX END=207621767 GT ./. chr2 207621959 . A . . LowGQX END=207622098 GT ./. chr2 207625623 . A . . LowGQX END=207625740 GT ./. chr2 207629882 . T . . LowGQX END=207630035 GT ./. chr2 207631367 . G . . LowGQX END=207632246 GT ./. chr2 207634764 . G . . LowGQX END=207634970 GT ./. chr2 207635855 . C . . LowGQX END=207636066 GT ./. chr2 207636567 . A . . LowGQX END=207636793 GT ./. chr2 207636854 . A . . LowGQX END=207637096 GT ./. chr2 207638898 . T . . LowGQX END=207639173 GT ./. chr2 207651406 . G . . LowGQX END=207651675 GT ./. chr2 207652610 . A . . LowGQX END=207652931 GT ./. chr2 207653492 . A . . LowGQX END=207653702 GT ./. chr2 207655245 . C . . LowGQX END=207655462 GT ./. chr2 207656356 . T . . LowGQX END=207656578 GT ./. chr2 207804308 . C . . LowGQX END=207804408 GT ./. chr2 207814339 . A . . LowGQX END=207814440 GT ./. chr2 207820185 . A . . LowGQX END=207820291 GT ./. chr2 207823023 . A . . LowGQX END=207823132 GT ./. chr2 207824353 . A . . LowGQX END=207824468 GT ./. chr2 207825572 . A . . LowGQX END=207825672 GT ./. chr2 207827134 . A . . LowGQX END=207827341 GT ./. chr2 207832925 . T . . LowGQX END=207833080 GT ./. chr2 207833896 . A . . LowGQX END=207834163 GT ./. chr2 207945913 . T . . LowGQX END=207946013 GT ./. chr2 207953180 . A . . LowGQX END=207953308 GT ./. chr2 207988496 . A . . LowGQX END=207989131 GT ./. chr2 207998750 . C . . LowGQX END=207998850 GT ./. chr2 208013850 . C . . LowGQX END=208013950 GT ./. chr2 208030189 . A . . LowGQX END=208030295 GT ./. chr2 208031815 . A . . LowGQX END=208031915 GT ./. chr2 208133928 . C . . LowGQX END=208134179 GT ./. chr2 208420358 . A . . LowGQX END=208420476 GT ./. chr2 208424948 . A . . LowGQX END=208425099 GT ./. chr2 208425761 . A . . LowGQX END=208425914 GT ./. chr2 208432185 . A . . LowGQX END=208432290 GT ./. chr2 208434901 . A . . LowGQX END=208435048 GT ./. chr2 208436425 . T . . LowGQX END=208436525 GT ./. chr2 208439994 . A . . LowGQX END=208440181 GT ./. chr2 208441313 . G . . LowGQX END=208441413 GT ./. chr2 208442227 . A . . LowGQX END=208442480 GT ./. chr2 208446545 . T . . LowGQX END=208446671 GT ./. chr2 208446828 . A . . LowGQX END=208446928 GT ./. chr2 208447494 . G . . LowGQX END=208447654 GT ./. chr2 208461596 . G . . LowGQX END=208461785 GT ./. chr2 208477768 . A . . LowGQX END=208478170 GT ./. chr2 208485342 . C . . LowGQX END=208485442 GT ./. chr2 208486528 . A . . LowGQX END=208486644 GT ./. chr2 208488951 . A . . LowGQX END=208489102 GT ./. chr2 208576549 . A . . LowGQX END=208576909 GT ./. chr2 208579004 . T . . LowGQX END=208579159 GT ./. chr2 208589452 . A . . LowGQX END=208589612 GT ./. chr2 208591474 . C . . LowGQX END=208591634 GT ./. chr2 208598669 . A . . LowGQX END=208598774 GT ./. chr2 208602043 . A . . LowGQX END=208602203 GT ./. chr2 208605287 . A . . LowGQX END=208605455 GT ./. chr2 208606945 . A . . LowGQX END=208607069 GT ./. chr2 208611769 . A . . LowGQX END=208611940 GT ./. chr2 208615679 . A . . LowGQX END=208615846 GT ./. chr2 208618310 . A . . LowGQX END=208618425 GT ./. chr2 208626332 . A . . LowGQX END=208626432 GT ./. chr2 208631696 . C . . LowGQX END=208633466 GT ./. chr2 208693041 . A . . LowGQX END=208693223 GT ./. chr2 208717487 . G . . LowGQX END=208717587 GT ./. chr2 208725827 . A . . LowGQX END=208725989 GT ./. chr2 208765969 . C . . LowGQX END=208766069 GT ./. chr2 208773166 . C . . LowGQX END=208773320 GT ./. chr2 208794593 . C . . LowGQX END=208794693 GT ./. chr2 208795638 . T . . LowGQX END=208795846 GT ./. chr2 208811089 . A . . LowGQX END=208811239 GT ./. chr2 208841373 . A . . LowGQX END=208842313 GT ./. chr2 208865752 . A . . LowGQX END=208866366 GT ./. chr2 208986346 . G . . LowGQX END=208986721 GT ./. chr2 208988785 . C . . LowGQX END=208989249 GT ./. chr2 208992876 . A . . LowGQX END=208993251 GT ./. chr2 208994114 . T . . LowGQX END=208994568 GT ./. chr2 209007360 . C . . LowGQX END=209007640 GT ./. chr2 209010496 . A . . LowGQX END=209010743 GT ./. chr2 209010791 . C . . LowGQX END=209010891 GT ./. chr2 209025526 . G . . LowGQX END=209025803 GT ./. chr2 209027926 . A . . LowGQX END=209028173 GT ./. chr2 209028227 . C . . LowGQX END=209028327 GT ./. chr2 209030454 . G . . LowGQX END=209030554 GT ./. chr2 209033035 . T . . LowGQX END=209033220 GT ./. chr2 209035667 . A . . LowGQX END=209035790 GT ./. chr2 209036646 . A . . LowGQX END=209036860 GT ./. chr2 209045455 . C . . LowGQX END=209045555 GT ./. chr2 209045936 . C . . LowGQX END=209046036 GT ./. chr2 209047681 . C . . LowGQX END=209047781 GT ./. chr2 209049666 . T . . LowGQX END=209049766 GT ./. chr2 209051641 . A . . LowGQX END=209051741 GT ./. chr2 209054610 . T . . LowGQX END=209054764 GT ./. chr2 209101752 . T . . LowGQX END=209101945 GT ./. chr2 209103744 . G . . LowGQX END=209104009 GT ./. chr2 209104536 . C . . LowGQX END=209104779 GT ./. chr2 209106667 . G . . LowGQX END=209106921 GT ./. chr2 209108100 . A . . LowGQX END=209108380 GT ./. chr2 209109992 . C . . LowGQX END=209110200 GT ./. chr2 209113042 . G . . LowGQX END=209113436 GT ./. chr2 209116103 . C . . LowGQX END=209116327 GT ./. chr2 209136193 . C . . LowGQX END=209136467 GT ./. chr2 209138257 . C . . LowGQX END=209138509 GT ./. chr2 209138710 . A . . LowGQX END=209138810 GT ./. chr2 209141385 . A . . LowGQX END=209141606 GT ./. chr2 209142210 . T . . LowGQX END=209142484 GT ./. chr2 209150399 . G . . LowGQX END=209150709 GT ./. chr2 209153402 . T . . LowGQX END=209153594 GT ./. chr2 209163314 . T . . LowGQX END=209163555 GT ./. chr2 209165610 . G . . LowGQX END=209165870 GT ./. chr2 209166915 . A . . LowGQX END=209167129 GT ./. chr2 209168844 . C . . LowGQX END=209169094 GT ./. chr2 209169519 . T . . LowGQX END=209169800 GT ./. chr2 209176909 . T . . LowGQX END=209177071 GT ./. chr2 209178967 . G . . LowGQX END=209179199 GT ./. chr2 209179866 . G . . LowGQX END=209180149 GT ./. chr2 209182540 . T . . LowGQX END=209182717 GT ./. chr2 209184925 . C . . LowGQX END=209185135 GT ./. chr2 209188815 . T . . LowGQX END=209189058 GT ./. chr2 209189584 . A . . LowGQX END=209189813 GT ./. chr2 209189943 . T . . LowGQX END=209191205 GT ./. chr2 209192853 . G . . LowGQX END=209193056 GT ./. chr2 209194512 . A . . LowGQX END=209194689 GT ./. chr2 209195196 . C . . LowGQX END=209195470 GT ./. chr2 209197988 . A . . LowGQX END=209198269 GT ./. chr2 209199979 . A . . LowGQX END=209200195 GT ./. chr2 209200466 . G . . LowGQX END=209200677 GT ./. chr2 209200719 . G . . LowGQX END=209200976 GT ./. chr2 209201521 . A . . LowGQX END=209201704 GT ./. chr2 209203181 . G . . LowGQX END=209203344 GT ./. chr2 209204091 . C . . LowGQX END=209204331 GT ./. chr2 209204684 . T . . LowGQX END=209204907 GT ./. chr2 209207227 . T . . LowGQX END=209207425 GT ./. chr2 209209784 . T . . LowGQX END=209209970 GT ./. chr2 209210723 . T . . LowGQX END=209210923 GT ./. chr2 209212532 . T . . LowGQX END=209212799 GT ./. chr2 209214697 . A . . LowGQX END=209214859 GT ./. chr2 209215444 . A . . LowGQX END=209215723 GT ./. chr2 209216025 . A . . LowGQX END=209216231 GT ./. chr2 209217327 . T . . LowGQX END=209217558 GT ./. chr2 209218571 . A . . LowGQX END=209218935 GT ./. chr2 209219244 . T . . LowGQX END=209219421 GT ./. chr2 209219863 . C . . LowGQX END=209220081 GT ./. chr2 209224855 . A . . LowGQX END=209224963 GT ./. chr2 209271696 . C . . LowGQX END=209271917 GT ./. chr2 209292924 . A . . LowGQX END=209293031 GT ./. chr2 209302260 . A . . LowGQX END=209302375 GT ./. chr2 209302483 . A . . LowGQX END=209302609 GT ./. chr2 209307087 . A . . LowGQX END=209307189 GT ./. chr2 209308071 . A . . LowGQX END=209308265 GT ./. chr2 209309457 . A . . LowGQX END=209309615 GT ./. chr2 209315455 . A . . LowGQX END=209315555 GT ./. chr2 209324548 . C . . LowGQX END=209324704 GT ./. chr2 209345733 . A . . LowGQX END=209345893 GT ./. chr2 209353735 . A . . LowGQX END=209353878 GT ./. chr2 209355282 . G . . LowGQX END=209355435 GT ./. chr2 209357987 . A . . LowGQX END=209358387 GT ./. chr2 209436715 . T . . LowGQX END=209436815 GT ./. chr2 210517893 . G . . LowGQX END=210518159 GT ./. chr2 210543294 . A . . LowGQX END=210543412 GT ./. chr2 210545463 . T . . LowGQX END=210545563 GT ./. chr2 210555327 . A . . LowGQX END=210555573 GT ./. chr2 210557347 . A . . LowGQX END=210561077 GT ./. chr2 210561264 . A . . LowGQX END=210561475 GT ./. chr2 210561639 . A . . LowGQX END=210561778 GT ./. chr2 210564982 . T . . LowGQX END=210565082 GT ./. chr2 210568685 . A . . LowGQX END=210568785 GT ./. chr2 210569172 . A . . LowGQX END=210569347 GT ./. chr2 210570302 . A . . LowGQX END=210570492 GT ./. chr2 210574636 . A . . LowGQX END=210574981 GT ./. chr2 210588316 . T . . LowGQX END=210588416 GT ./. chr2 210590424 . T . . LowGQX END=210590524 GT ./. chr2 210594572 . A . . LowGQX END=210594689 GT ./. chr2 210594904 . A . . LowGQX END=210595124 GT ./. chr2 210636733 . G . . LowGQX END=210636893 GT ./. chr2 210637793 . A . . LowGQX END=210637893 GT ./. chr2 210640611 . A . . LowGQX END=210640772 GT ./. chr2 210641980 . A . . LowGQX END=210642286 GT ./. chr2 210650788 . A . . LowGQX END=210650916 GT ./. chr2 210654243 . T . . LowGQX END=210654343 GT ./. chr2 210658442 . A . . LowGQX END=210658586 GT ./. chr2 210659422 . T . . LowGQX END=210659582 GT ./. chr2 210678303 . G . . LowGQX END=210678566 GT ./. chr2 210679980 . G . . LowGQX END=210680116 GT ./. chr2 210681632 . G . . LowGQX END=210681850 GT ./. chr2 210682535 . G . . LowGQX END=210682677 GT ./. chr2 210683716 . G . . LowGQX END=210683986 GT ./. chr2 210685034 . G . . LowGQX END=210685404 GT ./. chr2 210690630 . G . . LowGQX END=210690778 GT ./. chr2 210693955 . G . . LowGQX END=210694104 GT ./. chr2 210696166 . G . . LowGQX END=210696316 GT ./. chr2 210698725 . G . . LowGQX END=210698893 GT ./. chr2 210699635 . G . . LowGQX END=210699735 GT ./. chr2 210703945 . G . . LowGQX END=210704161 GT ./. chr2 210705265 . G . . LowGQX END=210705373 GT ./. chr2 210707072 . A . . LowGQX END=210707172 GT ./. chr2 210714174 . G . . LowGQX END=210714348 GT ./. chr2 210737481 . G . . LowGQX END=210737695 GT ./. chr2 210742677 . G . . LowGQX END=210742814 GT ./. chr2 210745684 . G . . LowGQX END=210745819 GT ./. chr2 210752818 . G . . LowGQX END=210752985 GT ./. chr2 210761036 . G . . LowGQX END=210761138 GT ./. chr2 210769488 . G . . LowGQX END=210769690 GT ./. chr2 210777283 . G . . LowGQX END=210777392 GT ./. chr2 210778525 . G . . LowGQX END=210778665 GT ./. chr2 210782500 . G . . LowGQX END=210782683 GT ./. chr2 210783255 . G . . LowGQX END=210783388 GT ./. chr2 210786223 . G . . LowGQX END=210786411 GT ./. chr2 210786975 . G . . LowGQX END=210787108 GT ./. chr2 210791566 . G . . LowGQX END=210791711 GT ./. chr2 210794544 . T . . LowGQX END=210794696 GT ./. chr2 210795685 . C . . LowGQX END=210795785 GT ./. chr2 210798545 . G . . LowGQX END=210798730 GT ./. chr2 210800435 . T . . LowGQX END=210800587 GT ./. chr2 210801563 . T . . LowGQX END=210801663 GT ./. chr2 210802252 . G . . LowGQX END=210802355 GT ./. chr2 210804195 . G . . LowGQX END=210804377 GT ./. chr2 210805944 . G . . LowGQX END=210806214 GT ./. chr2 210808103 . G . . LowGQX END=210808239 GT ./. chr2 210809774 . G . . LowGQX END=210809914 GT ./. chr2 210810569 . A . . LowGQX END=210810669 GT ./. chr2 210818823 . G . . LowGQX END=210818995 GT ./. chr2 210822364 . A . . LowGQX END=210822464 GT ./. chr2 210823811 . A . . LowGQX END=210823911 GT ./. chr2 210824212 . G . . LowGQX END=210824432 GT ./. chr2 210832160 . G . . LowGQX END=210832366 GT ./. chr2 210834491 . G . . LowGQX END=210834616 GT ./. chr2 210835555 . G . . LowGQX END=210835682 GT ./. chr2 210836924 . G . . LowGQX END=210837094 GT ./. chr2 210837787 . G . . LowGQX END=210837995 GT ./. chr2 210840842 . G . . LowGQX END=210841042 GT ./. chr2 210841636 . G . . LowGQX END=210841803 GT ./. chr2 210843252 . G . . LowGQX END=210843433 GT ./. chr2 210846902 . G . . LowGQX END=210847046 GT ./. chr2 210849558 . C . . LowGQX END=210849658 GT ./. chr2 210856881 . G . . LowGQX END=210856981 GT ./. chr2 210858038 . G . . LowGQX END=210858151 GT ./. chr2 210858788 . G . . LowGQX END=210858989 GT ./. chr2 210860052 . G . . LowGQX END=210860320 GT ./. chr2 210867384 . G . . LowGQX END=210867554 GT ./. chr2 210868128 . A . . LowGQX END=210868228 GT ./. chr2 210874371 . T . . LowGQX END=210874471 GT ./. chr2 210880695 . A . . LowGQX END=210880839 GT ./. chr2 210880905 . A . . LowGQX END=210881005 GT ./. chr2 210881229 . A . . LowGQX END=210881368 GT ./. chr2 210882191 . A . . LowGQX END=210882291 GT ./. chr2 210882462 . T . . LowGQX END=210882613 GT ./. chr2 210882860 . A . . LowGQX END=210882960 GT ./. chr2 210884391 . A . . LowGQX END=210884518 GT ./. chr2 210887671 . T . . LowGQX END=210887906 GT ./. chr2 210888755 . A . . LowGQX END=210888928 GT ./. chr2 210889826 . G . . LowGQX END=210889943 GT ./. chr2 210891998 . C . . LowGQX END=210892098 GT ./. chr2 210893567 . A . . LowGQX END=210893737 GT ./. chr2 210894525 . A . . LowGQX END=210894645 GT ./. chr2 210896093 . T . . LowGQX END=210896273 GT ./. chr2 210905044 . G . . LowGQX END=210905254 GT ./. chr2 210908637 . T . . LowGQX END=210908831 GT ./. chr2 210940274 . A . . LowGQX END=210940483 GT ./. chr2 210962808 . A . . LowGQX END=210962988 GT ./. chr2 210968816 . C . . LowGQX END=210969028 GT ./. chr2 210993753 . A . . LowGQX END=210993899 GT ./. chr2 211018215 . T . . LowGQX END=211019309 GT ./. chr2 211053634 . A . . LowGQX END=211053830 GT ./. chr2 211057477 . T . . LowGQX END=211057666 GT ./. chr2 211059884 . T . . LowGQX END=211060114 GT ./. chr2 211068004 . C . . LowGQX END=211068220 GT ./. chr2 211069254 . T . . LowGQX END=211069458 GT ./. chr2 211070305 . A . . LowGQX END=211070572 GT ./. chr2 211074869 . C . . LowGQX END=211075038 GT ./. chr2 211081020 . A . . LowGQX END=211081287 GT ./. chr2 211082637 . T . . LowGQX END=211082878 GT ./. chr2 211085320 . T . . LowGQX END=211085578 GT ./. chr2 211089800 . A . . LowGQX END=211090039 GT ./. chr2 211155735 . A . . LowGQX END=211155835 GT ./. chr2 211158436 . A . . LowGQX END=211158536 GT ./. chr2 211158967 . A . . LowGQX END=211159145 GT ./. chr2 211163142 . A . . LowGQX END=211163290 GT ./. chr2 211167176 . G . . LowGQX END=211167276 GT ./. chr2 211167455 . T . . LowGQX END=211167555 GT ./. chr2 211168218 . T . . LowGQX END=211168318 GT ./. chr2 211179592 . T . . LowGQX END=211179813 GT ./. chr2 211299200 . A . . LowGQX END=211299300 GT ./. chr2 211300098 . G . . LowGQX END=211300198 GT ./. chr2 211300938 . A . . LowGQX END=211301119 GT ./. chr2 211302412 . A . . LowGQX END=211302599 GT ./. chr2 211305320 . A . . LowGQX END=211305471 GT ./. chr2 211306030 . A . . LowGQX END=211306170 GT ./. chr2 211319829 . A . . LowGQX END=211320041 GT ./. chr2 211336297 . T . . LowGQX END=211336397 GT ./. chr2 211336681 . A . . LowGQX END=211336803 GT ./. chr2 211341031 . T . . LowGQX END=211341131 GT ./. chr2 211342449 . C . . LowGQX END=211342549 GT ./. chr2 211420324 . G . . LowGQX END=211420424 GT ./. chr2 211421037 . T . . LowGQX END=211421137 GT ./. chr2 211421442 . G . . LowGQX END=211421635 GT ./. chr2 211437971 . G . . LowGQX END=211438183 GT ./. chr2 211441019 . T . . LowGQX END=211441266 GT ./. chr2 211442094 . T . . LowGQX END=211442286 GT ./. chr2 211444387 . C . . LowGQX END=211444546 GT ./. chr2 211447290 . A . . LowGQX END=211447485 GT ./. chr2 211452731 . G . . LowGQX END=211452923 GT ./. chr2 211454779 . T . . LowGQX END=211455010 GT ./. chr2 211455473 . A . . LowGQX END=211455682 GT ./. chr2 211456504 . T . . LowGQX END=211456745 GT ./. chr2 211457552 . T . . LowGQX END=211457732 GT ./. chr2 211459181 . T . . LowGQX END=211459382 GT ./. chr2 211460160 . A . . LowGQX END=211460358 GT ./. chr2 211464045 . T . . LowGQX END=211464337 GT ./. chr2 211465228 . A . . LowGQX END=211465488 GT ./. chr2 211466875 . C . . LowGQX END=211467106 GT ./. chr2 211469775 . G . . LowGQX END=211470022 GT ./. chr2 211471404 . G . . LowGQX END=211471717 GT ./. chr2 211473034 . T . . LowGQX END=211473335 GT ./. chr2 211476790 . A . . LowGQX END=211477069 GT ./. chr2 211481096 . G . . LowGQX END=211481317 GT ./. chr2 211502375 . T . . LowGQX END=211502619 GT ./. chr2 211503823 . A . . LowGQX END=211503991 GT ./. chr2 211504669 . G . . LowGQX END=211504835 GT ./. chr2 211507157 . T . . LowGQX END=211507441 GT ./. chr2 211512536 . C . . LowGQX END=211512833 GT ./. chr2 211513146 . T . . LowGQX END=211513316 GT ./. chr2 211515036 . G . . LowGQX END=211515214 GT ./. chr2 211518698 . T . . LowGQX END=211518878 GT ./. chr2 211521208 . G . . LowGQX END=211521408 GT ./. chr2 211523272 . A . . LowGQX END=211523464 GT ./. chr2 211525158 . T . . LowGQX END=211525431 GT ./. chr2 211527796 . T . . LowGQX END=211527973 GT ./. chr2 211532859 . T . . LowGQX END=211533060 GT ./. chr2 211539575 . A . . LowGQX END=211539737 GT ./. chr2 211540401 . A . . LowGQX END=211540616 GT ./. chr2 211541680 . C . . LowGQX END=211541912 GT ./. chr2 211542560 . A . . LowGQX END=211542787 GT ./. chr2 212248289 . T . . LowGQX END=212248837 GT ./. chr2 212251527 . T . . LowGQX END=212251927 GT ./. chr2 212252604 . G . . LowGQX END=212252769 GT ./. chr2 212285115 . T . . LowGQX END=212285388 GT ./. chr2 212286681 . A . . LowGQX END=212286881 GT ./. chr2 212288829 . T . . LowGQX END=212289078 GT ./. chr2 212293082 . C . . LowGQX END=212293260 GT ./. chr2 212295619 . A . . LowGQX END=212295877 GT ./. chr2 212426559 . G . . LowGQX END=212426865 GT ./. chr2 212483851 . A . . LowGQX END=212484052 GT ./. chr2 212488596 . T . . LowGQX END=212488821 GT ./. chr2 212495136 . A . . LowGQX END=212495371 GT ./. chr2 212522428 . G . . LowGQX END=212522605 GT ./. chr2 212522647 . G . . LowGQX END=212522747 GT ./. chr2 212529997 . A . . LowGQX END=212530244 GT ./. chr2 212537838 . T . . LowGQX END=212538034 GT ./. chr2 212543726 . A . . LowGQX END=212543961 GT ./. chr2 212566641 . T . . LowGQX END=212566943 GT ./. chr2 212568778 . A . . LowGQX END=212568971 GT ./. chr2 212569992 . T . . LowGQX END=212570168 GT ./. chr2 212576724 . C . . LowGQX END=212576953 GT ./. chr2 212578209 . A . . LowGQX END=212578415 GT ./. chr2 212587067 . G . . LowGQX END=212587311 GT ./. chr2 212589750 . T . . LowGQX END=212589971 GT ./. chr2 212615307 . A . . LowGQX END=212615481 GT ./. chr2 212652699 . G . . LowGQX END=212652936 GT ./. chr2 212812104 . G . . LowGQX END=212812393 GT ./. chr2 212989426 . C . . LowGQX END=212989680 GT ./. chr2 213290916 . T . . LowGQX END=213291137 GT ./. chr2 213403122 . G . . LowGQX END=213403306 GT ./. chr2 213872082 . G . . LowGQX END=213872811 GT ./. chr2 213878513 . A . . LowGQX END=213878705 GT ./. chr2 213886391 . C . . LowGQX END=213886491 GT ./. chr2 213886715 . A . . LowGQX END=213886857 GT ./. chr2 213914435 . A . . LowGQX END=213914607 GT ./. chr2 213921400 . C . . LowGQX END=213921500 GT ./. chr2 213921555 . A . . LowGQX END=213921826 GT ./. chr2 213962627 . G . . LowGQX END=213962727 GT ./. chr2 214012309 . T . . LowGQX END=214012539 GT ./. chr2 214013294 . A . . LowGQX END=214013394 GT ./. chr2 214014856 . A . . LowGQX END=214014956 GT ./. chr2 214142369 . A . . LowGQX END=214142729 GT ./. chr2 214143070 . A . . LowGQX END=214143256 GT ./. chr2 214148730 . A . . LowGQX END=214148830 GT ./. chr2 214149166 . C . . LowGQX END=214149346 GT ./. chr2 214149381 . G . . LowGQX END=214149481 GT ./. chr2 214150577 . T . . LowGQX END=214150677 GT ./. chr2 214160715 . G . . LowGQX END=214160865 GT ./. chr2 214161746 . A . . LowGQX END=214161864 GT ./. chr2 214161984 . A . . LowGQX END=214162084 GT ./. chr2 214174781 . A . . LowGQX END=214174904 GT ./. chr2 214181941 . A . . LowGQX END=214182097 GT ./. chr2 214204885 . A . . LowGQX END=214205045 GT ./. chr2 214215250 . A . . LowGQX END=214215372 GT ./. chr2 214228738 . T . . LowGQX END=214228893 GT ./. chr2 214239682 . T . . LowGQX END=214239846 GT ./. chr2 214261314 . G . . LowGQX END=214261417 GT ./. chr2 214286861 . G . . LowGQX END=214287045 GT ./. chr2 214354685 . A . . LowGQX END=214354817 GT ./. chr2 214727207 . A . . LowGQX END=214727355 GT ./. chr2 214794682 . A . . LowGQX END=214794872 GT ./. chr2 214878673 . A . . LowGQX END=214878804 GT ./. chr2 214972903 . C . . LowGQX END=214973003 GT ./. chr2 215013862 . A . . LowGQX END=215013993 GT ./. chr2 215102840 . A . . LowGQX END=215102940 GT ./. chr2 215274842 . C . . LowGQX END=215275042 GT ./. chr2 215278907 . T . . LowGQX END=215279317 GT ./. chr2 215301352 . G . . LowGQX END=215301483 GT ./. chr2 215440395 . G . . LowGQX END=215440545 GT ./. chr2 215593349 . G . . LowGQX END=215593784 GT ./. chr2 215595084 . T . . LowGQX END=215595284 GT ./. chr2 215595590 . A . . LowGQX END=215595690 GT ./. chr2 215609740 . A . . LowGQX END=215609935 GT ./. chr2 215610395 . C . . LowGQX END=215610630 GT ./. chr2 215617120 . A . . LowGQX END=215617331 GT ./. chr2 215632155 . T . . LowGQX END=215632430 GT ./. chr2 215633905 . T . . LowGQX END=215634088 GT ./. chr2 215645233 . G . . LowGQX END=215646285 GT ./. chr2 215656970 . A . . LowGQX END=215657221 GT ./. chr2 215661734 . A . . LowGQX END=215661893 GT ./. chr2 215674085 . A . . LowGQX END=215674345 GT ./. chr2 215797307 . C . . LowGQX END=215797517 GT ./. chr2 215798751 . A . . LowGQX END=215798991 GT ./. chr2 215802183 . A . . LowGQX END=215802391 GT ./. chr2 215807598 . A . . LowGQX END=215807793 GT ./. chr2 215809674 . C . . LowGQX END=215809880 GT ./. chr2 215812095 . G . . LowGQX END=215812332 GT ./. chr2 215813269 . G . . LowGQX END=215813513 GT ./. chr2 215813713 . T . . LowGQX END=215813925 GT ./. chr2 215815552 . A . . LowGQX END=215815859 GT ./. chr2 215818527 . T . . LowGQX END=215818883 GT ./. chr2 215819875 . C . . LowGQX END=215820137 GT ./. chr2 215821336 . G . . LowGQX END=215821554 GT ./. chr2 215822950 . C . . LowGQX END=215823230 GT ./. chr2 215823697 . A . . LowGQX END=215823854 GT ./. chr2 215831521 . A . . LowGQX END=215831729 GT ./. chr2 215833393 . A . . LowGQX END=215833583 GT ./. chr2 215834946 . T . . LowGQX END=215835176 GT ./. chr2 215838622 . A . . LowGQX END=215838818 GT ./. chr2 215839451 . A . . LowGQX END=215839640 GT ./. chr2 215840458 . C . . LowGQX END=215840813 GT ./. chr2 215842989 . C . . LowGQX END=215843242 GT ./. chr2 215843477 . G . . LowGQX END=215843816 GT ./. chr2 215845156 . T . . LowGQX END=215845419 GT ./. chr2 215846860 . A . . LowGQX END=215847159 GT ./. chr2 215848320 . G . . LowGQX END=215848641 GT ./. chr2 215851215 . T . . LowGQX END=215851504 GT ./. chr2 215852320 . T . . LowGQX END=215852569 GT ./. chr2 215854002 . A . . LowGQX END=215854397 GT ./. chr2 215855375 . A . . LowGQX END=215855807 GT ./. chr2 215862368 . A . . LowGQX END=215862585 GT ./. chr2 215865378 . T . . LowGQX END=215865796 GT ./. chr2 215866231 . G . . LowGQX END=215866513 GT ./. chr2 215868882 . T . . LowGQX END=215869075 GT ./. chr2 215872400 . T . . LowGQX END=215872622 GT ./. chr2 215875004 . T . . LowGQX END=215875236 GT ./. chr2 215876112 . T . . LowGQX END=215876425 GT ./. chr2 215876644 . A . . LowGQX END=215876911 GT ./. chr2 215880163 . T . . LowGQX END=215880439 GT ./. chr2 215882681 . C . . LowGQX END=215882908 GT ./. chr2 215884009 . A . . LowGQX END=215884572 GT ./. chr2 215890346 . C . . LowGQX END=215890555 GT ./. chr2 215891493 . A . . LowGQX END=215891714 GT ./. chr2 215896494 . T . . LowGQX END=215896703 GT ./. chr2 215901626 . C . . LowGQX END=215901841 GT ./. chr2 215910510 . A . . LowGQX END=215910791 GT ./. chr2 215914299 . T . . LowGQX END=215914587 GT ./. chr2 215917160 . A . . LowGQX END=215917360 GT ./. chr2 215919246 . T . . LowGQX END=215919440 GT ./. chr2 215928738 . A . . LowGQX END=215928994 GT ./. chr2 215940230 . T . . LowGQX END=215940341 GT ./. chr2 215976269 . T . . LowGQX END=215976465 GT ./. chr2 216002812 . A . . LowGQX END=216002983 GT ./. chr2 216176775 . C . . LowGQX END=216177048 GT ./. chr2 216177163 . C . . LowGQX END=216177399 GT ./. chr2 216182829 . A . . LowGQX END=216183008 GT ./. chr2 216184337 . A . . LowGQX END=216184506 GT ./. chr2 216189913 . A . . LowGQX END=216190104 GT ./. chr2 216190659 . C . . LowGQX END=216190913 GT ./. chr2 216191494 . C . . LowGQX END=216191753 GT ./. chr2 216197054 . C . . LowGQX END=216197282 GT ./. chr2 216198022 . A . . LowGQX END=216198232 GT ./. chr2 216199591 . T . . LowGQX END=216199779 GT ./. chr2 216200702 . T . . LowGQX END=216200899 GT ./. chr2 216203451 . A . . LowGQX END=216203682 GT ./. chr2 216209451 . T . . LowGQX END=216209646 GT ./. chr2 216211431 . G . . LowGQX END=216211716 GT ./. chr2 216212302 . T . . LowGQX END=216212402 GT ./. chr2 216213321 . A . . LowGQX END=216213481 GT ./. chr2 216213766 . A . . LowGQX END=216214036 GT ./. chr2 216214208 . T . . LowGQX END=216214430 GT ./. chr2 216226227 . G . . LowGQX END=216226401 GT ./. chr2 216226641 . A . . LowGQX END=216226854 GT ./. chr2 216229551 . C . . LowGQX END=216229760 GT ./. chr2 216230177 . T . . LowGQX END=216230405 GT ./. chr2 216232535 . T . . LowGQX END=216232802 GT ./. chr2 216234966 . C . . LowGQX END=216235207 GT ./. chr2 216236581 . C . . LowGQX END=216237150 GT ./. chr2 216237994 . G . . LowGQX END=216238186 GT ./. chr2 216239886 . C . . LowGQX END=216240168 GT ./. chr2 216240301 . A . . LowGQX END=216240493 GT ./. chr2 216241170 . A . . LowGQX END=216241449 GT ./. chr2 216242847 . A . . LowGQX END=216243037 GT ./. chr2 216243802 . T . . LowGQX END=216244099 GT ./. chr2 216245483 . G . . LowGQX END=216245855 GT ./. chr2 216246884 . C . . LowGQX END=216247100 GT ./. chr2 216248000 . G . . LowGQX END=216248258 GT ./. chr2 216248692 . C . . LowGQX END=216248959 GT ./. chr2 216249532 . A . . LowGQX END=216249751 GT ./. chr2 216251361 . C . . LowGQX END=216251733 GT ./. chr2 216252884 . A . . LowGQX END=216253076 GT ./. chr2 216256304 . T . . LowGQX END=216256589 GT ./. chr2 216257603 . G . . LowGQX END=216257978 GT ./. chr2 216259200 . C . . LowGQX END=216259494 GT ./. chr2 216261809 . G . . LowGQX END=216261998 GT ./. chr2 216262352 . A . . LowGQX END=216262623 GT ./. chr2 216263929 . C . . LowGQX END=216264126 GT ./. chr2 216269061 . G . . LowGQX END=216269430 GT ./. chr2 216270910 . C . . LowGQX END=216271285 GT ./. chr2 216271799 . A . . LowGQX END=216272096 GT ./. chr2 216272780 . T . . LowGQX END=216273201 GT ./. chr2 216274235 . A . . LowGQX END=216274514 GT ./. chr2 216274606 . T . . LowGQX END=216274879 GT ./. chr2 216279526 . C . . LowGQX END=216279733 GT ./. chr2 216283914 . T . . LowGQX END=216284160 GT ./. chr2 216285345 . T . . LowGQX END=216285576 GT ./. chr2 216286763 . C . . LowGQX END=216287018 GT ./. chr2 216288022 . T . . LowGQX END=216288301 GT ./. chr2 216288818 . G . . LowGQX END=216289100 GT ./. chr2 216289766 . A . . LowGQX END=216290060 GT ./. chr2 216292852 . A . . LowGQX END=216293113 GT ./. chr2 216295387 . T . . LowGQX END=216295627 GT ./. chr2 216296505 . C . . LowGQX END=216296739 GT ./. chr2 216297996 . A . . LowGQX END=216298236 GT ./. chr2 216299368 . T . . LowGQX END=216299599 GT ./. chr2 216300327 . T . . LowGQX END=216300577 GT ./. chr2 216808101 . A . . LowGQX END=216808201 GT ./. chr2 216809585 . T . . LowGQX END=216809721 GT ./. chr2 216810293 . C . . LowGQX END=216810458 GT ./. chr2 216811741 . C . . LowGQX END=216811841 GT ./. chr2 216861028 . C . . LowGQX END=216861189 GT ./. chr2 216877893 . A . . LowGQX END=216878053 GT ./. chr2 216903947 . T . . LowGQX END=216904135 GT ./. chr2 216908576 . T . . LowGQX END=216908790 GT ./. chr2 216913935 . T . . LowGQX END=216914148 GT ./. chr2 216916121 . A . . LowGQX END=216916320 GT ./. chr2 216923567 . C . . LowGQX END=216923751 GT ./. chr2 216929984 . T . . LowGQX END=216930252 GT ./. chr2 216931057 . C . . LowGQX END=216931293 GT ./. chr2 216946290 . T . . LowGQX END=216946516 GT ./. chr2 216960685 . G . . LowGQX END=216960960 GT ./. chr2 216964641 . A . . LowGQX END=216965279 GT ./. chr2 216972158 . A . . LowGQX END=216972294 GT ./. chr2 216972349 . T . . LowGQX END=216972449 GT ./. chr2 216974061 . G . . LowGQX END=216974221 GT ./. chr2 216976040 . T . . LowGQX END=216976200 GT ./. chr2 216977737 . A . . LowGQX END=216977855 GT ./. chr2 216981320 . G . . LowGQX END=216981568 GT ./. chr2 216982444 . A . . LowGQX END=216982544 GT ./. chr2 216983764 . A . . LowGQX END=216983891 GT ./. chr2 216986783 . A . . LowGQX END=216986979 GT ./. chr2 216990638 . A . . LowGQX END=216990757 GT ./. chr2 216992257 . A . . LowGQX END=216992400 GT ./. chr2 216995596 . A . . LowGQX END=216995756 GT ./. chr2 216997030 . T . . LowGQX END=216997130 GT ./. chr2 217001809 . A . . LowGQX END=217001951 GT ./. chr2 217002808 . T . . LowGQX END=217002960 GT ./. chr2 217005907 . A . . LowGQX END=217006045 GT ./. chr2 217012794 . T . . LowGQX END=217013002 GT ./. chr2 217024788 . T . . LowGQX END=217024888 GT ./. chr2 217026687 . G . . LowGQX END=217026787 GT ./. chr2 217054946 . A . . LowGQX END=217055060 GT ./. chr2 217057360 . A . . LowGQX END=217057461 GT ./. chr2 217059626 . C . . LowGQX END=217059726 GT ./. chr2 217069033 . T . . LowGQX END=217069133 GT ./. chr2 217069869 . A . . LowGQX END=217069969 GT ./. chr2 217124033 . T . . LowGQX END=217124405 GT ./. chr2 217142393 . A . . LowGQX END=217142590 GT ./. chr2 217148295 . A . . LowGQX END=217148455 GT ./. chr2 217234466 . A . . LowGQX END=217234986 GT ./. chr2 217279377 . C . . LowGQX END=217280290 GT ./. chr2 217280925 . G . . LowGQX END=217281082 GT ./. chr2 217284971 . C . . LowGQX END=217285307 GT ./. chr2 217288305 . T . . LowGQX END=217288458 GT ./. chr2 217293268 . A . . LowGQX END=217293557 GT ./. chr2 217297390 . G . . LowGQX END=217297643 GT ./. chr2 217300010 . G . . LowGQX END=217300271 GT ./. chr2 217303086 . A . . LowGQX END=217303260 GT ./. chr2 217311364 . T . . LowGQX END=217311464 GT ./. chr2 217311690 . C . . LowGQX END=217311933 GT ./. chr2 217315518 . A . . LowGQX END=217315839 GT ./. chr2 217329269 . C . . LowGQX END=217329442 GT ./. chr2 217332616 . A . . LowGQX END=217332821 GT ./. chr2 217339941 . A . . LowGQX END=217340226 GT ./. chr2 217341781 . A . . LowGQX END=217341984 GT ./. chr2 217342875 . C . . LowGQX END=217343074 GT ./. chr2 217347410 . G . . LowGQX END=217347752 GT ./. chr2 217363550 . G . . LowGQX END=217363650 GT ./. chr2 217363991 . A . . LowGQX END=217364124 GT ./. chr2 217364523 . T . . LowGQX END=217364623 GT ./. chr2 217364665 . T . . LowGQX END=217364765 GT ./. chr2 217366046 . C . . LowGQX END=217366146 GT ./. chr2 217443600 . G . . LowGQX END=217443700 GT ./. chr2 217498234 . G . . LowGQX END=217498694 GT ./. chr2 217524415 . A . . LowGQX END=217524515 GT ./. chr2 217525278 . A . . LowGQX END=217525615 GT ./. chr2 217526495 . C . . LowGQX END=217526724 GT ./. chr2 217528661 . A . . LowGQX END=217528830 GT ./. chr2 217541472 . C . . LowGQX END=217541608 GT ./. chr2 217542833 . A . . LowGQX END=217542957 GT ./. chr2 217543571 . A . . LowGQX END=217543938 GT ./. chr2 217559160 . A . . LowGQX END=217559501 GT ./. chr2 217724339 . G . . LowGQX END=217724474 GT ./. chr2 217724568 . G . . LowGQX END=217724809 GT ./. chr2 217735569 . C . . LowGQX END=217735704 GT ./. chr2 217736178 . G . . LowGQX END=217736339 GT ./. chr2 218568675 . A . . LowGQX END=218568798 GT ./. chr2 218577738 . G . . LowGQX END=218577838 GT ./. chr2 218604204 . C . . LowGQX END=218604304 GT ./. chr2 218620743 . C . . LowGQX END=218620856 GT ./. chr2 218669180 . G . . LowGQX END=218669329 GT ./. chr2 218672765 . G . . LowGQX END=218672865 GT ./. chr2 218673311 . G . . LowGQX END=218673411 GT ./. chr2 218674544 . A . . LowGQX END=218674717 GT ./. chr2 218674957 . A . . LowGQX END=218675057 GT ./. chr2 218677080 . C . . LowGQX END=218677180 GT ./. chr2 218677935 . C . . LowGQX END=218678035 GT ./. chr2 218678406 . A . . LowGQX END=218678542 GT ./. chr2 218679629 . A . . LowGQX END=218679729 GT ./. chr2 218682411 . A . . LowGQX END=218683485 GT ./. chr2 218686421 . C . . LowGQX END=218686731 GT ./. chr2 218694537 . G . . LowGQX END=218694637 GT ./. chr2 218695052 . G . . LowGQX END=218695152 GT ./. chr2 218696115 . C . . LowGQX END=218696326 GT ./. chr2 218699751 . G . . LowGQX END=218699962 GT ./. chr2 218700736 . A . . LowGQX END=218700937 GT ./. chr2 218706775 . C . . LowGQX END=218706884 GT ./. chr2 218712231 . A . . LowGQX END=218713455 GT ./. chr2 218713456 . C . . LowGQX END=218713478;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 218713479 . G A 7.78 LowGQX;LowGQ DP=1;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;MQ=60;MQ0=0;QD=7.78;SB=-0.01;TI=NM_022648;GI=TNS1;FC=Synonymous_H462H;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,1:1:3.01:37,3,0:60:3:1.000 chr2 218713480 . T . . LowGQX END=218713604;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 218713605 . C . . LowGQX END=218713813 GT ./. chr2 218724320 . C . . LowGQX END=218724425 GT ./. chr2 218744094 . A . . LowGQX END=218744254 GT ./. chr2 218745619 . A . . LowGQX END=218745740 GT ./. chr2 218746997 . G . . LowGQX END=218747152 GT ./. chr2 218749756 . A . . LowGQX END=218749890 GT ./. chr2 218750455 . G . . LowGQX END=218750555 GT ./. chr2 218750748 . A . . LowGQX END=218750848 GT ./. chr2 218751255 . A . . LowGQX END=218751372 GT ./. chr2 218755677 . A . . LowGQX END=218755777 GT ./. chr2 218757654 . C . . LowGQX END=218757754 GT ./. chr2 218758160 . A . . LowGQX END=218758287 GT ./. chr2 218759705 . A . . LowGQX END=218759805 GT ./. chr2 218762518 . C . . LowGQX END=218762693 GT ./. chr2 218765101 . G . . LowGQX END=218765315 GT ./. chr2 218768295 . A . . LowGQX END=218768395 GT ./. chr2 218770019 . C . . LowGQX END=218770169 GT ./. chr2 218771034 . C . . LowGQX END=218771134 GT ./. chr2 218771904 . C . . LowGQX END=218772004 GT ./. chr2 218784889 . T . . LowGQX END=218784989 GT ./. chr2 218801651 . A . . LowGQX END=218801751 GT ./. chr2 218843457 . C . . LowGQX END=218843557 GT ./. chr2 218855665 . C . . LowGQX END=218855780 GT ./. chr2 218867530 . G . . LowGQX END=218867630 GT ./. chr2 218925301 . T . . LowGQX END=218925721 GT ./. chr2 218935302 . A . . LowGQX END=218935402 GT ./. chr2 218935475 . G . . LowGQX END=218935583 GT ./. chr2 218937096 . G . . LowGQX END=218937223 GT ./. chr2 218937501 . G . . LowGQX END=218937609 GT ./. chr2 218937965 . G . . LowGQX END=218938110 GT ./. chr2 218938538 . G . . LowGQX END=218938669 GT ./. chr2 218939815 . G . . LowGQX END=218940464 GT ./. chr2 218941098 . G . . LowGQX END=218941309 GT ./. chr2 218947801 . C . . LowGQX END=218947980 GT ./. chr2 218953974 . G . . LowGQX END=218954086 GT ./. chr2 218954379 . G . . LowGQX END=218954561 GT ./. chr2 218954674 . G . . LowGQX END=218954778 GT ./. chr2 218999523 . A . . LowGQX END=219000610 GT ./. chr2 219028831 . G . . LowGQX END=219029986 GT ./. chr2 219082181 . G . . LowGQX END=219082281 GT ./. chr2 219090611 . T . . LowGQX END=219090711 GT ./. chr2 219091672 . T . . LowGQX END=219091772 GT ./. chr2 219093459 . A . . LowGQX END=219093619 GT ./. chr2 219099048 . T . . LowGQX END=219099148 GT ./. chr2 219099525 . A . . LowGQX END=219099625 GT ./. chr2 219103385 . A . . LowGQX END=219103576 GT ./. chr2 219104111 . C . . LowGQX END=219104211 GT ./. chr2 219110141 . A . . LowGQX END=219110272 GT ./. chr2 219114035 . C . . LowGQX END=219114190 GT ./. chr2 219114542 . A . . LowGQX END=219114647 GT ./. chr2 219117602 . C . . LowGQX END=219117762 GT ./. chr2 219118605 . C . . LowGQX END=219118705 GT ./. chr2 219127447 . G . . LowGQX END=219128448 GT ./. chr2 219129244 . G . . LowGQX END=219129344 GT ./. chr2 219129680 . C . . LowGQX END=219129900 GT ./. chr2 219130090 . A . . LowGQX END=219130190 GT ./. chr2 219130300 . A . . LowGQX END=219130408 GT ./. chr2 219130552 . A . . LowGQX END=219130672 GT ./. chr2 219130776 . A . . LowGQX END=219130876 GT ./. chr2 219131164 . A . . LowGQX END=219131313 GT ./. chr2 219131568 . A . . LowGQX END=219131712 GT ./. chr2 219132215 . A . . LowGQX END=219132339 GT ./. chr2 219134103 . A . . LowGQX END=219134322 GT ./. chr2 219134687 . A . . LowGQX END=219134812 GT ./. chr2 219135142 . G . . LowGQX END=219135377 GT ./. chr2 219136053 . C . . LowGQX END=219136324 GT ./. chr2 219137242 . G . . LowGQX END=219137537 GT ./. chr2 219140196 . C . . LowGQX END=219140347 GT ./. chr2 219140726 . C . . LowGQX END=219140826 GT ./. chr2 219141725 . A . . LowGQX END=219141825 GT ./. chr2 219142083 . C . . LowGQX END=219142183 GT ./. chr2 219142325 . C . . LowGQX END=219142425 GT ./. chr2 219142628 . C . . LowGQX END=219142728 GT ./. chr2 219143214 . C . . LowGQX END=219143314 GT ./. chr2 219143738 . A . . LowGQX END=219143838 GT ./. chr2 219143995 . A . . LowGQX END=219144095 GT ./. chr2 219144747 . A . . LowGQX END=219144852 GT ./. chr2 219146591 . G . . LowGQX END=219146893 GT ./. chr2 219187880 . A . . LowGQX END=219188206 GT ./. chr2 219199404 . C . . LowGQX END=219199504 GT ./. chr2 219204455 . A . . LowGQX END=219204673 GT ./. chr2 219204701 . C . . LowGQX END=219204916 GT ./. chr2 219205400 . A . . LowGQX END=219205561 GT ./. chr2 219206206 . T . . LowGQX END=219206401 GT ./. chr2 219206653 . C . . LowGQX END=219206919 GT ./. chr2 219208172 . C . . LowGQX END=219208361 GT ./. chr2 219209127 . G . . LowGQX END=219209345 GT ./. chr2 219209480 . G . . LowGQX END=219209756 GT ./. chr2 219221511 . G . . LowGQX END=219221671 GT ./. chr2 219221815 . T . . LowGQX END=219221915 GT ./. chr2 219222255 . A . . LowGQX END=219222460 GT ./. chr2 219222678 . C . . LowGQX END=219222838 GT ./. chr2 219225290 . C . . LowGQX END=219225390 GT ./. chr2 219227456 . A . . LowGQX END=219227628 GT ./. chr2 219229349 . A . . LowGQX END=219229478 GT ./. chr2 219231674 . T . . LowGQX END=219231836 GT ./. chr2 219232148 . C . . LowGQX END=219232248 GT ./. chr2 219232443 . A . . LowGQX END=219232690 GT ./. chr2 219247046 . C . . LowGQX END=219247146 GT ./. chr2 219247681 . A . . LowGQX END=219247736;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 219247737 . C . . LowGQX END=219247828 GT ./. chr2 219248964 . A . . LowGQX END=219249091 GT ./. chr2 219249827 . G . . LowGQX END=219249992 GT ./. chr2 219250062 . T . . LowGQX END=219250222 GT ./. chr2 219251356 . A . . LowGQX END=219251467 GT ./. chr2 219251809 . T . . LowGQX END=219251969 GT ./. chr2 219252272 . T . . LowGQX END=219252372 GT ./. chr2 219252491 . G . . LowGQX END=219252681 GT ./. chr2 219254591 . A . . LowGQX END=219254754 GT ./. chr2 219255916 . C . . LowGQX END=219256016 GT ./. chr2 219256097 . A . . LowGQX END=219256221 GT ./. chr2 219256787 . T . . LowGQX END=219256955 GT ./. chr2 219257672 . A . . LowGQX END=219257856 GT ./. chr2 219258830 . C . . LowGQX END=219258930 GT ./. chr2 219259353 . A . . LowGQX END=219259511 GT ./. chr2 219259646 . A . . LowGQX END=219259761 GT ./. chr2 219263059 . A . . LowGQX END=219263219 GT ./. chr2 219264738 . C . . LowGQX END=219264898 GT ./. chr2 219265017 . G . . LowGQX END=219265117 GT ./. chr2 219265390 . G . . LowGQX END=219265680 GT ./. chr2 219266264 . C . . LowGQX END=219266438 GT ./. chr2 219266832 . A . . LowGQX END=219266941 GT ./. chr2 219266991 . C . . LowGQX END=219267151 GT ./. chr2 219267298 . C . . LowGQX END=219267458 GT ./. chr2 219267734 . C . . LowGQX END=219267853 GT ./. chr2 219267953 . A . . LowGQX END=219268143 GT ./. chr2 219269018 . A . . LowGQX END=219269151 GT ./. chr2 219288490 . G . . LowGQX END=219288590 GT ./. chr2 219288988 . T . . LowGQX END=219289088 GT ./. chr2 219290326 . C . . LowGQX END=219290537 GT ./. chr2 219292686 . A . . LowGQX END=219292799 GT ./. chr2 219292948 . A . . LowGQX END=219293063 GT ./. chr2 219294006 . A . . LowGQX END=219294213 GT ./. chr2 219294310 . T . . LowGQX END=219294410 GT ./. chr2 219294570 . A . . LowGQX END=219294673 GT ./. chr2 219295446 . A . . LowGQX END=219295766 GT ./. chr2 219296578 . A . . LowGQX END=219296683 GT ./. chr2 219296767 . A . . LowGQX END=219296909 GT ./. chr2 219297152 . C . . LowGQX END=219297312 GT ./. chr2 219297514 . A . . LowGQX END=219297677 GT ./. chr2 219299247 . A . . LowGQX END=219299431 GT ./. chr2 219300010 . A . . LowGQX END=219300160 GT ./. chr2 219301203 . A . . LowGQX END=219301352 GT ./. chr2 219301845 . A . . LowGQX END=219302038 GT ./. chr2 219303366 . T . . LowGQX END=219303466 GT ./. chr2 219305443 . A . . LowGQX END=219305588 GT ./. chr2 219313944 . A . . LowGQX END=219314062 GT ./. chr2 219319647 . T . . LowGQX END=219319801 GT ./. chr2 219320301 . A . . LowGQX END=219320444 GT ./. chr2 219321800 . A . . LowGQX END=219321900 GT ./. chr2 219324511 . A . . LowGQX END=219324631 GT ./. chr2 219328010 . A . . LowGQX END=219328110 GT ./. chr2 219330681 . A . . LowGQX END=219330902 GT ./. chr2 219339351 . A . . LowGQX END=219339611 GT ./. chr2 219341561 . A . . LowGQX END=219341707 GT ./. chr2 219344296 . C . . LowGQX END=219344456 GT ./. chr2 219346791 . A . . LowGQX END=219346960 GT ./. chr2 219350377 . A . . LowGQX END=219350477 GT ./. chr2 219353025 . A . . LowGQX END=219353147 GT ./. chr2 219360481 . A . . LowGQX END=219360676 GT ./. chr2 219362455 . A . . LowGQX END=219362583 GT ./. chr2 219362747 . A . . LowGQX END=219362883 GT ./. chr2 219374700 . A . . LowGQX END=219374890 GT ./. chr2 219393441 . T . . LowGQX END=219393541 GT ./. chr2 219394672 . T . . LowGQX END=219394772 GT ./. chr2 219399330 . A . . LowGQX END=219399432 GT ./. chr2 219410933 . A . . LowGQX END=219411033 GT ./. chr2 219411610 . C . . LowGQX END=219411817 GT ./. chr2 219414530 . A . . LowGQX END=219414635 GT ./. chr2 219418274 . A . . LowGQX END=219418450 GT ./. chr2 219423219 . A . . LowGQX END=219423379 GT ./. chr2 219433640 . G . . LowGQX END=219433740 GT ./. chr2 219438667 . A . . LowGQX END=219438818 GT ./. chr2 219445282 . A . . LowGQX END=219445466 GT ./. chr2 219445679 . T . . LowGQX END=219445779 GT ./. chr2 219447692 . A . . LowGQX END=219447812 GT ./. chr2 219449333 . A . . LowGQX END=219449447 GT ./. chr2 219452026 . A . . LowGQX END=219452126 GT ./. chr2 219452307 . A . . LowGQX END=219452421 GT ./. chr2 219457025 . A . . LowGQX END=219457128 GT ./. chr2 219457275 . A . . LowGQX END=219457435 GT ./. chr2 219458224 . C . . LowGQX END=219458324 GT ./. chr2 219458829 . A . . LowGQX END=219459002 GT ./. chr2 219480424 . C . . LowGQX END=219480524 GT ./. chr2 219480626 . G . . LowGQX END=219480786 GT ./. chr2 219483301 . G . . LowGQX END=219483531 GT ./. chr2 219486191 . G . . LowGQX END=219486323 GT ./. chr2 219487369 . G . . LowGQX END=219487602 GT ./. chr2 219492751 . G . . LowGQX END=219493003 GT ./. chr2 219494241 . G . . LowGQX END=219494387 GT ./. chr2 219495339 . C . . LowGQX END=219495526 GT ./. chr2 219496858 . G . . LowGQX END=219497036 GT ./. chr2 219498107 . A . . LowGQX END=219498207 GT ./. chr2 219498327 . G . . LowGQX END=219498595 GT ./. chr2 219498827 . G . . LowGQX END=219498945 GT ./. chr2 219499180 . G . . LowGQX END=219499354 GT ./. chr2 219500518 . G . . LowGQX END=219500655 GT ./. chr2 219500965 . G . . LowGQX END=219501116 GT ./. chr2 219501193 . G . . LowGQX END=219501301 GT ./. chr2 219501560 . T . . LowGQX END=219501660 GT ./. chr2 219503060 . T . . LowGQX END=219503534 GT ./. chr2 219505385 . A . . LowGQX END=219505495 GT ./. chr2 219506749 . A . . LowGQX END=219509790 GT ./. chr2 219510892 . A . . LowGQX END=219511074 GT ./. chr2 219513356 . A . . LowGQX END=219514185 GT ./. chr2 219515050 . A . . LowGQX END=219515252 GT ./. chr2 219516424 . C . . LowGQX END=219517026 GT ./. chr2 219520871 . A . . LowGQX END=219521155 GT ./. chr2 219525660 . A . . LowGQX END=219526320 GT ./. chr2 219526431 . T . . LowGQX END=219526728 GT ./. chr2 219526869 . G . . LowGQX END=219527035 GT ./. chr2 219527182 . A . . LowGQX END=219527454 GT ./. chr2 219527555 . T . . LowGQX END=219527775 GT ./. chr2 219527806 . G . . LowGQX END=219528161 GT ./. chr2 219528678 . T . . LowGQX END=219529261 GT ./. chr2 219529460 . A . . LowGQX END=219529599 GT ./. chr2 219529815 . C . . LowGQX END=219529975 GT ./. chr2 219530637 . A . . LowGQX END=219530785 GT ./. chr2 219530868 . A . . LowGQX END=219530968 GT ./. chr2 219532620 . T . . LowGQX END=219532720 GT ./. chr2 219532786 . G . . LowGQX END=219532886 GT ./. chr2 219532960 . A . . LowGQX END=219533067 GT ./. chr2 219533316 . T . . LowGQX END=219533416 GT ./. chr2 219536624 . T . . LowGQX END=219536724 GT ./. chr2 219537545 . C . . LowGQX END=219537645 GT ./. chr2 219538346 . A . . LowGQX END=219538491 GT ./. chr2 219538591 . T . . LowGQX END=219538691 GT ./. chr2 219540064 . A . . LowGQX END=219540199 GT ./. chr2 219540750 . A . . LowGQX END=219541004 GT ./. chr2 219543888 . T . . LowGQX END=219543988 GT ./. chr2 219544281 . A . . LowGQX END=219544455 GT ./. chr2 219544614 . A . . LowGQX END=219544806 GT ./. chr2 219545324 . A . . LowGQX END=219545428 GT ./. chr2 219549806 . A . . LowGQX END=219549954 GT ./. chr2 219553025 . T . . LowGQX END=219553185 GT ./. chr2 219553418 . A . . LowGQX END=219553602 GT ./. chr2 219554580 . A . . LowGQX END=219554682 GT ./. chr2 219555171 . A . . LowGQX END=219555281 GT ./. chr2 219556864 . A . . LowGQX END=219557019 GT ./. chr2 219557304 . A . . LowGQX END=219557436 GT ./. chr2 219557961 . A . . LowGQX END=219558070 GT ./. chr2 219558444 . A . . LowGQX END=219558547 GT ./. chr2 219558613 . T . . LowGQX END=219558713 GT ./. chr2 219558969 . T . . LowGQX END=219559069 GT ./. chr2 219559246 . A . . LowGQX END=219559361 GT ./. chr2 219561238 . T . . LowGQX END=219561338 GT ./. chr2 219561525 . A . . LowGQX END=219561625 GT ./. chr2 219561760 . A . . LowGQX END=219561939 GT ./. chr2 219562184 . A . . LowGQX END=219562336 GT ./. chr2 219562575 . A . . LowGQX END=219562727 GT ./. chr2 219563323 . A . . LowGQX END=219564074 GT ./. chr2 219566587 . A . . LowGQX END=219566735 GT ./. chr2 219602398 . T . . LowGQX END=219603889 GT ./. chr2 219604779 . A . . LowGQX END=219604893 GT ./. chr2 219605226 . T . . LowGQX END=219605326 GT ./. chr2 219609830 . A . . LowGQX END=219609959 GT ./. chr2 219610412 . A . . LowGQX END=219610527 GT ./. chr2 219610867 . A . . LowGQX END=219610967 GT ./. chr2 219611724 . A . . LowGQX END=219611920 GT ./. chr2 219612005 . G . . LowGQX END=219612105 GT ./. chr2 219612318 . A . . LowGQX END=219612451 GT ./. chr2 219612826 . A . . LowGQX END=219612953 GT ./. chr2 219613557 . A . . LowGQX END=219613660 GT ./. chr2 219613974 . A . . LowGQX END=219614113 GT ./. chr2 219614730 . A . . LowGQX END=219614872 GT ./. chr2 219616425 . A . . LowGQX END=219616532 GT ./. chr2 219617484 . A . . LowGQX END=219617735 GT ./. chr2 219617824 . T . . LowGQX END=219617924 GT ./. chr2 219618300 . C . . LowGQX END=219618400 GT ./. chr2 219618855 . A . . LowGQX END=219619115 GT ./. chr2 219646855 . G . . LowGQX END=219647212 GT ./. chr2 219674249 . G . . LowGQX END=219674542 GT ./. chr2 219676894 . T . . LowGQX END=219677196 GT ./. chr2 219677224 . T . . LowGQX END=219677524 GT ./. chr2 219677596 . G . . LowGQX END=219677871 GT ./. chr2 219678693 . G . . LowGQX END=219678962 GT ./. chr2 219679052 . T . . LowGQX END=219679532 GT ./. chr2 219679583 . T . . LowGQX END=219679805 GT ./. chr2 219688434 . T . . LowGQX END=219688653 GT ./. chr2 219688894 . A . . LowGQX END=219689143 GT ./. chr2 219689211 . C . . LowGQX END=219689351 GT ./. chr2 219691600 . G . . LowGQX END=219691868 GT ./. chr2 219691919 . C . . LowGQX END=219692148 GT ./. chr2 219692247 . G . . LowGQX END=219692404 GT ./. chr2 219692505 . C . . LowGQX END=219692837 GT ./. chr2 219693191 . A . . LowGQX END=219693375 GT ./. chr2 219694650 . G . . LowGQX END=219695156 GT ./. chr2 219695418 . G . . LowGQX END=219695676 GT ./. chr2 219696008 . C . . LowGQX END=219696150 GT ./. chr2 219696410 . A . . LowGQX END=219696547 GT ./. chr2 219724691 . G . . LowGQX END=219724851 GT ./. chr2 219735747 . A . . LowGQX END=219735972 GT ./. chr2 219736194 . T . . LowGQX END=219736544 GT ./. chr2 219738104 . A . . LowGQX END=219738570 GT ./. chr2 219745667 . T . . LowGQX END=219745882 GT ./. chr2 219746832 . C . . LowGQX END=219747197 GT ./. chr2 219754655 . G . . LowGQX END=219755137 GT ./. chr2 219757445 . G . . LowGQX END=219758045 GT ./. chr2 219824541 . G . . LowGQX END=219825649 GT ./. chr2 219846376 . C . . LowGQX END=219846981 GT ./. chr2 219848941 . C . . LowGQX END=219849041 GT ./. chr2 219849662 . A . . LowGQX END=219849822 GT ./. chr2 219854972 . G . . LowGQX END=219855124 GT ./. chr2 219855572 . A . . LowGQX END=219855719 GT ./. chr2 219856822 . A . . LowGQX END=219856968 GT ./. chr2 219857736 . A . . LowGQX END=219857926 GT ./. chr2 219866289 . T . . LowGQX END=219866449 GT ./. chr2 219867652 . C . . LowGQX END=219867752 GT ./. chr2 219867855 . A . . LowGQX END=219867997 GT ./. chr2 219868672 . A . . LowGQX END=219869180 GT ./. chr2 219870154 . A . . LowGQX END=219870287 GT ./. chr2 219870741 . A . . LowGQX END=219870948 GT ./. chr2 219871160 . A . . LowGQX END=219871260 GT ./. chr2 219873767 . A . . LowGQX END=219873879 GT ./. chr2 219874067 . A . . LowGQX END=219874185 GT ./. chr2 219874662 . A . . LowGQX END=219874810 GT ./. chr2 219875236 . G . . LowGQX END=219875429 GT ./. chr2 219875525 . A . . LowGQX END=219875721 GT ./. chr2 219877979 . A . . LowGQX END=219878094 GT ./. chr2 219878225 . T . . LowGQX END=219878325 GT ./. chr2 219878588 . A . . LowGQX END=219878769 GT ./. chr2 219883718 . T . . LowGQX END=219883904 GT ./. chr2 219884226 . A . . LowGQX END=219884444 GT ./. chr2 219885872 . A . . LowGQX END=219886005 GT ./. chr2 219886500 . A . . LowGQX END=219886655 GT ./. chr2 219886891 . A . . LowGQX END=219887072 GT ./. chr2 219887857 . G . . LowGQX END=219888217 GT ./. chr2 219888735 . A . . LowGQX END=219888985 GT ./. chr2 219890742 . A . . LowGQX END=219890884 GT ./. chr2 219892194 . G . . LowGQX END=219892734 GT ./. chr2 219892921 . A . . LowGQX END=219893126 GT ./. chr2 219894123 . A . . LowGQX END=219894393 GT ./. chr2 219894706 . A . . LowGQX END=219894933 GT ./. chr2 219895409 . A . . LowGQX END=219895559 GT ./. chr2 219895826 . A . . LowGQX END=219896030 GT ./. chr2 219896198 . G . . LowGQX END=219896383 GT ./. chr2 219897190 . A . . LowGQX END=219897297 GT ./. chr2 219900052 . A . . LowGQX END=219900389 GT ./. chr2 219903095 . A . . LowGQX END=219903303 GT ./. chr2 219903616 . A . . LowGQX END=219903773 GT ./. chr2 219905214 . A . . LowGQX END=219905314 GT ./. chr2 219906172 . G . . LowGQX END=219906272 GT ./. chr2 219919878 . A . . LowGQX END=219920639 GT ./. chr2 219922104 . C . . LowGQX END=219922468 GT ./. chr2 219924824 . C . . LowGQX END=219925241 GT ./. chr2 219941022 . T . . LowGQX END=219941229 GT ./. chr2 219941917 . C . . LowGQX END=219942138 GT ./. chr2 219942754 . A . . LowGQX END=219942980 GT ./. chr2 219959987 . A . . LowGQX END=219960087 GT ./. chr2 220011341 . C . . LowGQX END=220011512 GT ./. chr2 220012328 . T . . LowGQX END=220012569 GT ./. chr2 220022143 . C . . LowGQX END=220022458 GT ./. chr2 220022857 . G . . LowGQX END=220023136 GT ./. chr2 220026629 . G . . LowGQX END=220026929 GT ./. chr2 220027019 . A . . LowGQX END=220027119 GT ./. chr2 220028108 . A . . LowGQX END=220028280 GT ./. chr2 220028953 . A . . LowGQX END=220029063 GT ./. chr2 220029880 . G . . LowGQX END=220030150 GT ./. chr2 220032580 . C . . LowGQX END=220032767 GT ./. chr2 220032915 . A . . LowGQX END=220033041 GT ./. chr2 220033359 . T . . LowGQX END=220033558 GT ./. chr2 220033732 . C . . LowGQX END=220033832 GT ./. chr2 220034006 . C . . LowGQX END=220034131 GT ./. chr2 220034241 . A . . LowGQX END=220034403 GT ./. chr2 220034503 . A . . LowGQX END=220034728 GT ./. chr2 220037295 . C . . LowGQX END=220037853 GT ./. chr2 220038070 . A . . LowGQX END=220038192 GT ./. chr2 220038849 . C . . LowGQX END=220038949 GT ./. chr2 220039498 . A . . LowGQX END=220039833 GT ./. chr2 220040304 . C . . LowGQX END=220040404 GT ./. chr2 220040943 . A . . LowGQX END=220041056 GT ./. chr2 220041467 . G . . LowGQX END=220041567 GT ./. chr2 220043062 . C . . LowGQX END=220043362 GT ./. chr2 220043642 . A . . LowGQX END=220043801 GT ./. chr2 220044421 . C . . LowGQX END=220044521 GT ./. chr2 220044830 . A . . LowGQX END=220044970 GT ./. chr2 220045385 . T . . LowGQX END=220045485 GT ./. chr2 220045782 . A . . LowGQX END=220045930 GT ./. chr2 220046089 . A . . LowGQX END=220046189 GT ./. chr2 220046360 . A . . LowGQX END=220046500 GT ./. chr2 220046733 . A . . LowGQX END=220047354 GT ./. chr2 220071628 . G . . LowGQX END=220071788 GT ./. chr2 220071977 . A . . LowGQX END=220072147 GT ./. chr2 220072368 . A . . LowGQX END=220072504 GT ./. chr2 220072607 . A . . LowGQX END=220072765 GT ./. chr2 220072976 . A . . LowGQX END=220073076 GT ./. chr2 220073146 . A . . LowGQX END=220073381 GT ./. chr2 220073686 . T . . LowGQX END=220073786 GT ./. chr2 220073982 . A . . LowGQX END=220074342 GT ./. chr2 220074658 . T . . LowGQX END=220074771 GT ./. chr2 220074937 . C . . LowGQX END=220075037 GT ./. chr2 220075101 . A . . LowGQX END=220075201 GT ./. chr2 220075431 . A . . LowGQX END=220075615 GT ./. chr2 220075654 . A . . LowGQX END=220075833 GT ./. chr2 220077107 . A . . LowGQX END=220077216 GT ./. chr2 220077709 . A . . LowGQX END=220077809 GT ./. chr2 220077956 . G . . LowGQX END=220078056 GT ./. chr2 220078143 . T . . LowGQX END=220078243 GT ./. chr2 220078301 . G . . LowGQX END=220078401 GT ./. chr2 220078546 . A . . LowGQX END=220078676 GT ./. chr2 220078826 . C . . LowGQX END=220078926 GT ./. chr2 220079109 . A . . LowGQX END=220079223 GT ./. chr2 220079681 . A . . LowGQX END=220079807 GT ./. chr2 220080717 . A . . LowGQX END=220080905 GT ./. chr2 220081084 . A . . LowGQX END=220081190 GT ./. chr2 220081372 . A . . LowGQX END=220081557 GT ./. chr2 220082390 . A . . LowGQX END=220082532 GT ./. chr2 220082845 . A . . LowGQX END=220083398 GT ./. chr2 220085122 . C . . LowGQX END=220085222 GT ./. chr2 220085467 . A . . LowGQX END=220085617 GT ./. chr2 220085729 . C . . LowGQX END=220086089 GT ./. chr2 220086770 . A . . LowGQX END=220086892 GT ./. chr2 220086972 . A . . LowGQX END=220087175 GT ./. chr2 220087365 . A . . LowGQX END=220087618 GT ./. chr2 220088305 . A . . LowGQX END=220088489 GT ./. chr2 220088559 . C . . LowGQX END=220088747 GT ./. chr2 220088826 . A . . LowGQX END=220089579 GT ./. chr2 220089791 . A . . LowGQX END=220089937 GT ./. chr2 220090131 . A . . LowGQX END=220090297 GT ./. chr2 220091574 . T . . LowGQX END=220091674 GT ./. chr2 220092464 . A . . LowGQX END=220092564 GT ./. chr2 220092642 . A . . LowGQX END=220092749 GT ./. chr2 220094978 . C . . LowGQX END=220095130 GT ./. chr2 220096538 . A . . LowGQX END=220096566 GT ./. chr2 220096567 . T . . LowGQX END=220096598;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 220096599 . A . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr2 220096600 . C . . LowGQX END=220096646;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 220096647 . T . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr2 220096648 . A . . LowGQX END=220096680;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 220096681 . G . 32.94 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:2.98:60:3 chr2 220096682 . C . . LowGQX END=220096700;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 220096701 . A . . LowGQX END=220096765 GT ./. chr2 220096980 . A . . LowGQX END=220097087 GT ./. chr2 220097210 . A . . LowGQX END=220097408 GT ./. chr2 220097799 . A . . LowGQX END=220097916 GT ./. chr2 220097966 . A . . LowGQX END=220098158 GT ./. chr2 220098435 . A . . LowGQX END=220098668 GT ./. chr2 220098853 . A . . LowGQX END=220099088 GT ./. chr2 220099546 . A . . LowGQX END=220100037 GT ./. chr2 220100194 . A . . LowGQX END=220100310 GT ./. chr2 220100428 . A . . LowGQX END=220100600 GT ./. chr2 220100725 . C . . LowGQX END=220100825 GT ./. chr2 220100992 . A . . LowGQX END=220101170 GT ./. chr2 220101792 . T . . LowGQX END=220102072 GT ./. chr2 220102232 . A . . LowGQX END=220102452 GT ./. chr2 220102546 . A . . LowGQX END=220102682 GT ./. chr2 220102970 . A . . LowGQX END=220103088 GT ./. chr2 220103212 . C . . LowGQX END=220103312 GT ./. chr2 220103415 . G . . LowGQX END=220103515 GT ./. chr2 220103812 . A . . LowGQX END=220103935 GT ./. chr2 220104104 . C . . LowGQX END=220104204 GT ./. chr2 220104281 . A . . LowGQX END=220104407 GT ./. chr2 220104477 . A . . LowGQX END=220104577 GT ./. chr2 220104605 . C . . LowGQX END=220104819 GT ./. chr2 220104911 . A . . LowGQX END=220105011 GT ./. chr2 220107164 . C . . LowGQX END=220107317 GT ./. chr2 220107488 . A . . LowGQX END=220107643 GT ./. chr2 220107868 . A . . LowGQX END=220108039 GT ./. chr2 220108210 . C . . LowGQX END=220108310 GT ./. chr2 220110715 . A . . LowGQX END=220110815 GT ./. chr2 220111243 . G . . LowGQX END=220111601 GT ./. chr2 220111833 . A . . LowGQX END=220111971 GT ./. chr2 220112135 . A . . LowGQX END=220112339 GT ./. chr2 220112382 . A . . LowGQX END=220112666 GT ./. chr2 220112913 . A . . LowGQX END=220113039 GT ./. chr2 220113141 . A . . LowGQX END=220113284 GT ./. chr2 220115072 . C . . LowGQX END=220116048 GT ./. chr2 220116285 . A . . LowGQX END=220116438 GT ./. chr2 220116728 . A . . LowGQX END=220116955 GT ./. chr2 220117456 . T . . LowGQX END=220117556 GT ./. chr2 220117704 . C . . LowGQX END=220117804 GT ./. chr2 220118086 . G . . LowGQX END=220118186 GT ./. chr2 220118470 . G . . LowGQX END=220118630 GT ./. chr2 220131216 . G . . LowGQX END=220131316 GT ./. chr2 220134924 . G . . LowGQX END=220135058 GT ./. chr2 220135888 . G . . LowGQX END=220136422 GT ./. chr2 220144539 . A . . LowGQX END=220144639 GT ./. chr2 220145298 . A . . LowGQX END=220145412 GT ./. chr2 220146417 . A . . LowGQX END=220146517 GT ./. chr2 220146659 . A . . LowGQX END=220146927 GT ./. chr2 220147556 . C . . LowGQX END=220147656 GT ./. chr2 220147853 . A . . LowGQX END=220147960 GT ./. chr2 220148127 . G . . LowGQX END=220148227 GT ./. chr2 220149352 . A . . LowGQX END=220149712 GT ./. chr2 220150664 . C . . LowGQX END=220150764 GT ./. chr2 220154934 . G . . LowGQX END=220155034 GT ./. chr2 220155247 . A . . LowGQX END=220155347 GT ./. chr2 220155531 . G . . LowGQX END=220155631 GT ./. chr2 220156109 . G . . LowGQX END=220156269 GT ./. chr2 220158768 . C . . LowGQX END=220158928 GT ./. chr2 220159695 . A . . LowGQX END=220159885 GT ./. chr2 220160946 . A . . LowGQX END=220161070 GT ./. chr2 220161150 . T . . LowGQX END=220161250 GT ./. chr2 220161458 . C . . LowGQX END=220161558 GT ./. chr2 220161705 . A . . LowGQX END=220161857 GT ./. chr2 220161953 . A . . LowGQX END=220162158 GT ./. chr2 220162605 . A . . LowGQX END=220162828 GT ./. chr2 220163752 . C . . LowGQX END=220163852 GT ./. chr2 220164017 . A . . LowGQX END=220164117 GT ./. chr2 220164416 . C . . LowGQX END=220164516 GT ./. chr2 220164691 . A . . LowGQX END=220164984 GT ./. chr2 220165633 . G . . LowGQX END=220165733 GT ./. chr2 220166308 . A . . LowGQX END=220166444 GT ./. chr2 220166857 . A . . LowGQX END=220167216 GT ./. chr2 220167226 . A . . LowGQX END=220167566 GT ./. chr2 220168384 . C . . LowGQX END=220168556 GT ./. chr2 220172164 . A . . LowGQX END=220172282 GT ./. chr2 220172490 . G . . LowGQX END=220172590 GT ./. chr2 220173630 . T . . LowGQX END=220173730 GT ./. chr2 220173757 . A . . LowGQX END=220173857 GT ./. chr2 220173897 . C . . LowGQX END=220174057 GT ./. chr2 220192210 . G . . LowGQX END=220192310 GT ./. chr2 220193638 . A . . LowGQX END=220193738 GT ./. chr2 220193880 . C . . LowGQX END=220193980 GT ./. chr2 220194056 . T . . LowGQX END=220194156 GT ./. chr2 220194358 . C . . LowGQX END=220194487 GT ./. chr2 220195492 . C . . LowGQX END=220195650 GT ./. chr2 220197245 . C . . LowGQX END=220197461 GT ./. chr2 220197841 . T . . LowGQX END=220197941 GT ./. chr2 220238990 . G . . LowGQX END=220239090 GT ./. chr2 220239575 . A . . LowGQX END=220239747 GT ./. chr2 220246055 . A . . LowGQX END=220246161 GT ./. chr2 220246237 . A . . LowGQX END=220246337 GT ./. chr2 220246699 . A . . LowGQX END=220246864 GT ./. chr2 220247845 . C . . LowGQX END=220247945 GT ./. chr2 220249077 . C . . LowGQX END=220249177 GT ./. chr2 220250086 . C . . LowGQX END=220250256 GT ./. chr2 220250301 . C . . LowGQX END=220250474 GT ./. chr2 220250688 . A . . LowGQX END=220250823 GT ./. chr2 220251006 . A . . LowGQX END=220251136 GT ./. chr2 220251385 . A . . LowGQX END=220251503 GT ./. chr2 220251609 . A . . LowGQX END=220251709 GT ./. chr2 220251789 . T . . LowGQX END=220251889 GT ./. chr2 220252358 . G . . LowGQX END=220252569 GT ./. chr2 220264143 . A . . LowGQX END=220264243 GT ./. chr2 220264568 . A . . LowGQX END=220264668 GT ./. chr2 220283134 . C . . LowGQX END=220283559 GT ./. chr2 220283560 . G . . LowGQX END=220283703;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 220283704 . G A 9.30 LowGQX BaseQRankSum=0.000;DP=4;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;MQ=60;MQ0=0;MQRankSum=1.026;QD=2.32;ReadPosRankSum=-1.026;SB=-30.97;TI=NM_001927;GI=DES;FC=Missense_A174T;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 0/1:2,2:4:38.75:39,0,39:60:9:0.500 chr2 220283705 . C . . LowGQX END=220283716;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 220283717 . T . . LowGQX . GT ./. chr2 220283718 . C . . LowGQX END=220283759;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 220283760 . C . . LowGQX END=220283775 GT ./. chr2 220283776 . A . . LowGQX END=220283803;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 220283804 . G A 14.92 LowGQX;LowGQ DP=2;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;MQ=60;MQ0=0;QD=7.46;SB=-40.01;TI=NM_001927;GI=DES;FC=Silent GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,2:2:3.01:45,3,0:60:3:1.000 chr2 220283805 . C . . LowGQX END=220283809;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 220283810 . G . . LowGQX END=220283814 GT ./. chr2 220284766 . C . . LowGQX END=220285120 GT ./. chr2 220285166 . G . . LowGQX END=220285430 GT ./. chr2 220285499 . T . . LowGQX END=220285727 GT ./. chr2 220286011 . G . . LowGQX END=220286334 GT ./. chr2 220288448 . G . . LowGQX END=220288594 GT ./. chr2 220290334 . T . . LowGQX END=220290519 GT ./. chr2 220290620 . C . . LowGQX END=220290764 GT ./. chr2 220299687 . G . . LowGQX END=220300097 GT ./. chr2 220306189 . G . . LowGQX END=220306349 GT ./. chr2 220306679 . G . . LowGQX END=220306839 GT ./. chr2 220307829 . G . . LowGQX END=220307956 GT ./. chr2 220308715 . T . . LowGQX END=220308815 GT ./. chr2 220309370 . T . . LowGQX END=220309470 GT ./. chr2 220309545 . A . . LowGQX END=220309892 GT ./. chr2 220312694 . A . . LowGQX END=220314002 GT ./. chr2 220315856 . A . . LowGQX END=220316004 GT ./. chr2 220316345 . A . . LowGQX END=220316532 GT ./. chr2 220326582 . A . . LowGQX END=220326782 GT ./. chr2 220327015 . T . . LowGQX END=220327115 GT ./. chr2 220329153 . A . . LowGQX END=220329354 GT ./. chr2 220330733 . T . . LowGQX END=220330833 GT ./. chr2 220331894 . A . . LowGQX END=220332159 GT ./. chr2 220333298 . A . . LowGQX END=220333461 GT ./. chr2 220333579 . A . . LowGQX END=220333773 GT ./. chr2 220333876 . A . . LowGQX END=220334104 GT ./. chr2 220336588 . A . . LowGQX END=220336712 GT ./. chr2 220336947 . A . . LowGQX END=220337056 GT ./. chr2 220337610 . A . . LowGQX END=220337821 GT ./. chr2 220338224 . A . . LowGQX END=220338352 GT ./. chr2 220338448 . A . . LowGQX END=220338628 GT ./. chr2 220341539 . T . . LowGQX END=220341707 GT ./. chr2 220341997 . A . . LowGQX END=220342170 GT ./. chr2 220342409 . A . . LowGQX END=220342510 GT ./. chr2 220342625 . A . . LowGQX END=220342830 GT ./. chr2 220343845 . T . . LowGQX END=220343945 GT ./. chr2 220344494 . T . . LowGQX END=220344594 GT ./. chr2 220344682 . A . . LowGQX END=220344865 GT ./. chr2 220345357 . G . . LowGQX END=220345457 GT ./. chr2 220346024 . A . . LowGQX END=220346181 GT ./. chr2 220346332 . T . . LowGQX END=220346432 GT ./. chr2 220347491 . T . . LowGQX END=220347591 GT ./. chr2 220347818 . A . . LowGQX END=220349805 GT ./. chr2 220350026 . G . . LowGQX END=220350202 GT ./. chr2 220352914 . A . . LowGQX END=220353035 GT ./. chr2 220353218 . A . . LowGQX END=220353390 GT ./. chr2 220353498 . A . . LowGQX END=220353625 GT ./. chr2 220353774 . A . . LowGQX END=220353946 GT ./. chr2 220354056 . A . . LowGQX END=220354664 GT ./. chr2 220355129 . A . . LowGQX END=220355373 GT ./. chr2 220355453 . A . . LowGQX END=220355681 GT ./. chr2 220356444 . C . . LowGQX END=220356604 GT ./. chr2 220356831 . A . . LowGQX END=220356985 GT ./. chr2 220357303 . C . . LowGQX END=220357511 GT ./. chr2 220357627 . C . . LowGQX END=220357787 GT ./. chr2 220358275 . A . . LowGQX END=220358375 GT ./. chr2 220361077 . A . . LowGQX END=220361205 GT ./. chr2 220361531 . G . . LowGQX END=220361839 GT ./. chr2 220362442 . T . . LowGQX END=220362584 GT ./. chr2 220362773 . G . . LowGQX END=220362909 GT ./. chr2 220364668 . G . . LowGQX END=220364768 GT ./. chr2 220364841 . A . . LowGQX END=220364943 GT ./. chr2 220366196 . A . . LowGQX END=220366304 GT ./. chr2 220366536 . A . . LowGQX END=220366762 GT ./. chr2 220367084 . C . . LowGQX END=220367184 GT ./. chr2 220368763 . G . . LowGQX END=220368938 GT ./. chr2 220369948 . A . . LowGQX END=220370087 GT ./. chr2 220370178 . A . . LowGQX END=220370486 GT ./. chr2 220370699 . C . . LowGQX END=220370799 GT ./. chr2 220370974 . A . . LowGQX END=220371147 GT ./. chr2 220371418 . A . . LowGQX END=220371523 GT ./. chr2 220379064 . A . . LowGQX END=220380031 GT ./. chr2 220396478 . A . . LowGQX END=220396627 GT ./. chr2 220396721 . A . . LowGQX END=220396869 GT ./. chr2 220397035 . A . . LowGQX END=220397244 GT ./. chr2 220397603 . A . . LowGQX END=220397793 GT ./. chr2 220399891 . A . . LowGQX END=220400049 GT ./. chr2 220401784 . A . . LowGQX END=220401884 GT ./. chr2 220401962 . A . . LowGQX END=220402191 GT ./. chr2 220402352 . A . . LowGQX END=220402511 GT ./. chr2 220402653 . A . . LowGQX END=220402822 GT ./. chr2 220404103 . G . . LowGQX END=220405367 GT ./. chr2 220405646 . C . . LowGQX END=220405850 GT ./. chr2 220406328 . A . . LowGQX END=220406914 GT ./. chr2 220407945 . A . . LowGQX END=220408263 GT ./. chr2 220408809 . A . . LowGQX END=220409100 GT ./. chr2 220409448 . C . . LowGQX END=220409618 GT ./. chr2 220412226 . A . . LowGQX END=220412806 GT ./. chr2 220413872 . A . . LowGQX END=220414079 GT ./. chr2 220414437 . A . . LowGQX END=220414579 GT ./. chr2 220415531 . C . . LowGQX END=220415631 GT ./. chr2 220416250 . C . . LowGQX END=220416521 GT ./. chr2 220416796 . G . . LowGQX END=220416956 GT ./. chr2 220417257 . C . . LowGQX END=220417420 GT ./. chr2 220417569 . T . . LowGQX END=220417747 GT ./. chr2 220418282 . G . . LowGQX END=220418409 GT ./. chr2 220419195 . C . . LowGQX END=220419463 GT ./. chr2 220420718 . A . . LowGQX END=220421015 GT ./. chr2 220421175 . C . . LowGQX END=220421446 GT ./. chr2 220422064 . C . . LowGQX END=220422341 GT ./. chr2 220422534 . G . . LowGQX END=220422833 GT ./. chr2 220422905 . C . . LowGQX END=220423182 GT ./. chr2 220423946 . C . . LowGQX END=220424220 GT ./. chr2 220426605 . G . . LowGQX END=220426731 GT ./. chr2 220427123 . C . . LowGQX END=220427397 GT ./. chr2 220428076 . C . . LowGQX END=220428350 GT ./. chr2 220429963 . C . . LowGQX END=220430237 GT ./. chr2 220431551 . C . . LowGQX END=220431849 GT ./. chr2 220431994 . C . . LowGQX END=220432298 GT ./. chr2 220432439 . C . . LowGQX END=220432692 GT ./. chr2 220432776 . C . . LowGQX END=220433047 GT ./. chr2 220434942 . C . . LowGQX END=220435964 GT ./. chr2 220437046 . A . . LowGQX END=220437416 GT ./. chr2 220439365 . C . . LowGQX END=220440300 GT ./. chr2 220462592 . C . . LowGQX END=220462692 GT ./. chr2 220462755 . C . . LowGQX END=220462909 GT ./. chr2 220465956 . G . . LowGQX END=220466229 GT ./. chr2 220466350 . T . . LowGQX END=220466450 GT ./. chr2 220466708 . A . . LowGQX END=220466808 GT ./. chr2 220467189 . G . . LowGQX END=220467298 GT ./. chr2 220467413 . C . . LowGQX END=220467513 GT ./. chr2 220470329 . G . . LowGQX END=220470457 GT ./. chr2 220470677 . G . . LowGQX END=220470782 GT ./. chr2 220470916 . G . . LowGQX END=220471136 GT ./. chr2 220471169 . A . . LowGQX END=220471269 GT ./. chr2 220471433 . G . . LowGQX END=220471581 GT ./. chr2 220471767 . A . . LowGQX END=220471867 GT ./. chr2 220472768 . G . . LowGQX END=220473153 GT ./. chr2 220473304 . G . . LowGQX END=220473511 GT ./. chr2 220473808 . T . . LowGQX END=220474011 GT ./. chr2 220474084 . G . . LowGQX END=220474370 GT ./. chr2 220476325 . G . . LowGQX END=220476557 GT ./. chr2 220476676 . G . . LowGQX END=220476781 GT ./. chr2 220477849 . G . . LowGQX END=220477949 GT ./. chr2 220478453 . C . . LowGQX END=220478653 GT ./. chr2 220478874 . T . . LowGQX END=220478974 GT ./. chr2 220479197 . G . . LowGQX END=220479418 GT ./. chr2 220479815 . G . . LowGQX END=220480064 GT ./. chr2 220480420 . T . . LowGQX END=220480520 GT ./. chr2 220480765 . G . . LowGQX END=220480916 GT ./. chr2 220492631 . C . . LowGQX END=220492843 GT ./. chr2 220493125 . A . . LowGQX END=220493315 GT ./. chr2 220493864 . A . . LowGQX END=220494146 GT ./. chr2 220494250 . G . . LowGQX END=220494420 GT ./. chr2 220494792 . A . . LowGQX END=220495077 GT ./. chr2 220495961 . A . . LowGQX END=220496178 GT ./. chr2 220496688 . A . . LowGQX END=220496841 GT ./. chr2 220496962 . T . . LowGQX END=220497167 GT ./. chr2 220497594 . A . . LowGQX END=220497734 GT ./. chr2 220497994 . A . . LowGQX END=220498194 GT ./. chr2 220498527 . C . . LowGQX END=220498704 GT ./. chr2 220499140 . A . . LowGQX END=220499329 GT ./. chr2 220499991 . A . . LowGQX END=220500221 GT ./. chr2 220500323 . C . . LowGQX END=220500683 GT ./. chr2 220501001 . C . . LowGQX END=220501175 GT ./. chr2 220501400 . A . . LowGQX END=220501599 GT ./. chr2 220502301 . A . . LowGQX END=220502536 GT ./. chr2 220502881 . T . . LowGQX END=220502981 GT ./. chr2 220503423 . A . . LowGQX END=220503612 GT ./. chr2 220504202 . A . . LowGQX END=220504460 GT ./. chr2 220505150 . A . . LowGQX END=220505324 GT ./. chr2 220505509 . A . . LowGQX END=220505687 GT ./. chr2 220506362 . T . . LowGQX END=220506462 GT ./. chr2 220521235 . A . . LowGQX END=220521335 GT ./. chr2 220586326 . T . . LowGQX END=220586426 GT ./. chr2 222290746 . G . . LowGQX END=222290865 GT ./. chr2 222291179 . C . . LowGQX END=222291379 GT ./. chr2 222294666 . A . . LowGQX END=222294874 GT ./. chr2 222298860 . A . . LowGQX END=222299014 GT ./. chr2 222301117 . A . . LowGQX END=222301331 GT ./. chr2 222301762 . A . . LowGQX END=222301862 GT ./. chr2 222307547 . A . . LowGQX END=222307737 GT ./. chr2 222308211 . A . . LowGQX END=222308329 GT ./. chr2 222310823 . T . . LowGQX END=222310923 GT ./. chr2 222320265 . A . . LowGQX END=222320381 GT ./. chr2 222321331 . A . . LowGQX END=222321495 GT ./. chr2 222322584 . A . . LowGQX END=222322713 GT ./. chr2 222347070 . A . . LowGQX END=222347413 GT ./. chr2 222365735 . A . . LowGQX END=222365895 GT ./. chr2 222367215 . G . . LowGQX END=222367315 GT ./. chr2 222428449 . A . . LowGQX END=222429117 GT ./. chr2 222433422 . G . . LowGQX END=222433522 GT ./. chr2 222436874 . T . . LowGQX END=222436974 GT ./. chr2 223065876 . A . . LowGQX END=223066011 GT ./. chr2 223066072 . C . . LowGQX END=223066213 GT ./. chr2 223066592 . C . . LowGQX END=223066961 GT ./. chr2 223084808 . T . . LowGQX END=223085125 GT ./. chr2 223085890 . G . . LowGQX END=223086158 GT ./. chr2 223096746 . T . . LowGQX END=223097054 GT ./. chr2 223158391 . G . . LowGQX END=223158529 GT ./. chr2 223158823 . G . . LowGQX END=223159072 GT ./. chr2 223160196 . G . . LowGQX END=223160428 GT ./. chr2 223161646 . A . . LowGQX END=223161984 GT ./. chr2 223163199 . A . . LowGQX END=223163386 GT ./. chr2 223168620 . A . . LowGQX END=223169116 GT ./. chr2 223289320 . C . . LowGQX END=223289562 GT ./. chr2 223339285 . A . . LowGQX END=223339448 GT ./. chr2 223386434 . G . . LowGQX END=223386668 GT ./. chr2 223389658 . C . . LowGQX END=223389758 GT ./. chr2 223423064 . A . . LowGQX END=223423620 GT ./. chr2 223436588 . C . . LowGQX END=223436744 GT ./. chr2 223464645 . A . . LowGQX END=223464835 GT ./. chr2 223478528 . A . . LowGQX END=223478650 GT ./. chr2 223484361 . T . . LowGQX END=223484461 GT ./. chr2 223488300 . T . . LowGQX END=223488460 GT ./. chr2 223488989 . A . . LowGQX END=223489201 GT ./. chr2 223489414 . T . . LowGQX END=223489514 GT ./. chr2 223493532 . T . . LowGQX END=223493632 GT ./. chr2 223494760 . T . . LowGQX END=223494913 GT ./. chr2 223496251 . C . . LowGQX END=223496409 GT ./. chr2 223497865 . C . . LowGQX END=223498076 GT ./. chr2 223499108 . A . . LowGQX END=223499263 GT ./. chr2 223504297 . A . . LowGQX END=223504417 GT ./. chr2 223505509 . T . . LowGQX END=223505666 GT ./. chr2 223507568 . A . . LowGQX END=223507727 GT ./. chr2 223509205 . A . . LowGQX END=223509305 GT ./. chr2 223513437 . T . . LowGQX END=223513537 GT ./. chr2 223520654 . A . . LowGQX END=223520873 GT ./. chr2 223536502 . G . . LowGQX END=223536602 GT ./. chr2 223553062 . G . . LowGQX END=223553242 GT ./. chr2 223553983 . G . . LowGQX END=223554189 GT ./. chr2 223559080 . G . . LowGQX END=223559256 GT ./. chr2 223559807 . G . . LowGQX END=223560008 GT ./. chr2 223574454 . G . . LowGQX END=223574610 GT ./. chr2 223773479 . T . . LowGQX END=223773879 GT ./. chr2 223781035 . A . . LowGQX END=223781217 GT ./. chr2 223782762 . A . . LowGQX END=223782876 GT ./. chr2 223783780 . A . . LowGQX END=223783923 GT ./. chr2 223785672 . A . . LowGQX END=223785787 GT ./. chr2 223785996 . A . . LowGQX END=223786151 GT ./. chr2 223787424 . A . . LowGQX END=223787594 GT ./. chr2 223787782 . T . . LowGQX END=223787882 GT ./. chr2 223789172 . A . . LowGQX END=223789352 GT ./. chr2 223791733 . A . . LowGQX END=223791910 GT ./. chr2 223793508 . T . . LowGQX END=223793668 GT ./. chr2 223795337 . A . . LowGQX END=223795533 GT ./. chr2 223797882 . A . . LowGQX END=223798001 GT ./. chr2 223799246 . A . . LowGQX END=223799436 GT ./. chr2 223806213 . A . . LowGQX END=223806375 GT ./. chr2 223917498 . G . . LowGQX END=223918113 GT ./. chr2 224462145 . G . . LowGQX END=224464003 GT ./. chr2 224617464 . T . . LowGQX END=224617624 GT ./. chr2 224623400 . T . . LowGQX END=224623500 GT ./. chr2 224629893 . A . . LowGQX END=224630070 GT ./. chr2 224634919 . G . . LowGQX END=224635043 GT ./. chr2 224638007 . G . . LowGQX END=224638107 GT ./. chr2 224640616 . A . . LowGQX END=224640729 GT ./. chr2 224640760 . C . . LowGQX END=224640860 GT ./. chr2 224642405 . C . . LowGQX END=224642589 GT ./. chr2 224702057 . G . . LowGQX END=224702217 GT ./. chr2 224743368 . G . . LowGQX END=224743468 GT ./. chr2 224744839 . A . . LowGQX END=224744952 GT ./. chr2 224746657 . A . . LowGQX END=224746792 GT ./. chr2 224749363 . A . . LowGQX END=224749469 GT ./. chr2 224758949 . A . . LowGQX END=224759059 GT ./. chr2 224760219 . A . . LowGQX END=224760350 GT ./. chr2 224763673 . A . . LowGQX END=224763790 GT ./. chr2 224765898 . A . . LowGQX END=224766053 GT ./. chr2 224770642 . A . . LowGQX END=224770742 GT ./. chr2 224776898 . A . . LowGQX END=224777057 GT ./. chr2 224782644 . C . . LowGQX END=224782744 GT ./. chr2 224809823 . C . . LowGQX END=224810043 GT ./. chr2 224822168 . T . . LowGQX END=224822371 GT ./. chr2 224824249 . A . . LowGQX END=224824722 GT ./. chr2 224828471 . A . . LowGQX END=224828681 GT ./. chr2 224831578 . A . . LowGQX END=224831754 GT ./. chr2 224840553 . G . . LowGQX END=224840653 GT ./. chr2 224842253 . T . . LowGQX END=224842353 GT ./. chr2 224845023 . C . . LowGQX END=224845123 GT ./. chr2 224847396 . A . . LowGQX END=224847501 GT ./. chr2 224849467 . A . . LowGQX END=224849670 GT ./. chr2 224856447 . T . . LowGQX END=224856787 GT ./. chr2 224862830 . A . . LowGQX END=224863062 GT ./. chr2 224866357 . A . . LowGQX END=224866640 GT ./. chr2 224903164 . C . . LowGQX END=224903264 GT ./. chr2 225244289 . G . . LowGQX END=225244926 GT ./. chr2 225265129 . A . . LowGQX END=225265229 GT ./. chr2 225265752 . A . . LowGQX END=225266488 GT ./. chr2 225338960 . T . . LowGQX END=225339096 GT ./. chr2 225342915 . A . . LowGQX END=225343065 GT ./. chr2 225346607 . A . . LowGQX END=225346807 GT ./. chr2 225360547 . A . . LowGQX END=225360686 GT ./. chr2 225362468 . A . . LowGQX END=225362569 GT ./. chr2 225365078 . A . . LowGQX END=225365207 GT ./. chr2 225367680 . A . . LowGQX END=225367792 GT ./. chr2 225368367 . A . . LowGQX END=225368542 GT ./. chr2 225370671 . A . . LowGQX END=225370852 GT ./. chr2 225371573 . A . . LowGQX END=225371723 GT ./. chr2 225376069 . A . . LowGQX END=225376302 GT ./. chr2 225378189 . A . . LowGQX END=225378358 GT ./. chr2 225379327 . A . . LowGQX END=225379492 GT ./. chr2 225400243 . A . . LowGQX END=225400412 GT ./. chr2 225422374 . A . . LowGQX END=225422576 GT ./. chr2 225427911 . C . . LowGQX END=225428038 GT ./. chr2 225434398 . A . . LowGQX END=225434498 GT ./. chr2 225449584 . A . . LowGQX END=225449744 GT ./. chr2 225630437 . C . . LowGQX END=225630555 GT ./. chr2 225633577 . A . . LowGQX END=225633677 GT ./. chr2 225634927 . C . . LowGQX END=225635067 GT ./. chr2 225635261 . C . . LowGQX END=225635363 GT ./. chr2 225637873 . C . . LowGQX END=225638065 GT ./. chr2 225639621 . C . . LowGQX END=225639833 GT ./. chr2 225642854 . C . . LowGQX END=225643002 GT ./. chr2 225643077 . A . . LowGQX END=225643177 GT ./. chr2 225649407 . G . . LowGQX END=225649507 GT ./. chr2 225651738 . C . . LowGQX END=225651853 GT ./. chr2 225651991 . C . . LowGQX END=225652115 GT ./. chr2 225653780 . C . . LowGQX END=225653888 GT ./. chr2 225657690 . C . . LowGQX END=225657790 GT ./. chr2 225658096 . T . . LowGQX END=225658196 GT ./. chr2 225659595 . C . . LowGQX END=225659812 GT ./. chr2 225661032 . C . . LowGQX END=225661144 GT ./. chr2 225661680 . C . . LowGQX END=225661864 GT ./. chr2 225662548 . C . . LowGQX END=225662728 GT ./. chr2 225664867 . C . . LowGQX END=225664981 GT ./. chr2 225666632 . C . . LowGQX END=225666758 GT ./. chr2 225668828 . C . . LowGQX END=225668931 GT ./. chr2 225669430 . G . . LowGQX END=225669585 GT ./. chr2 225669758 . T . . LowGQX END=225669858 GT ./. chr2 225669922 . C . . LowGQX END=225670038 GT ./. chr2 225670124 . C . . LowGQX END=225670247 GT ./. chr2 225670842 . C . . LowGQX END=225670955 GT ./. chr2 225672384 . C . . LowGQX END=225672502 GT ./. chr2 225672627 . C . . LowGQX END=225672804 GT ./. chr2 225679009 . G . . LowGQX END=225679109 GT ./. chr2 225681273 . A . . LowGQX END=225681432 GT ./. chr2 225684155 . G . . LowGQX END=225684255 GT ./. chr2 225688217 . C . . LowGQX END=225688397 GT ./. chr2 225695244 . A . . LowGQX END=225695344 GT ./. chr2 225698866 . C . . LowGQX END=225699026 GT ./. chr2 225702464 . A . . LowGQX END=225702564 GT ./. chr2 225704670 . C . . LowGQX END=225704790 GT ./. chr2 225706517 . T . . LowGQX END=225706617 GT ./. chr2 225709463 . T . . LowGQX END=225709563 GT ./. chr2 225709919 . C . . LowGQX END=225710042 GT ./. chr2 225710235 . C . . LowGQX END=225710360 GT ./. chr2 225714220 . T . . LowGQX END=225714320 GT ./. chr2 225717077 . T . . LowGQX END=225717177 GT ./. chr2 225717651 . C . . LowGQX END=225717840 GT ./. chr2 225719670 . A . . LowGQX END=225719770 GT ./. chr2 225721576 . C . . LowGQX END=225721700 GT ./. chr2 225727284 . T . . LowGQX END=225727464 GT ./. chr2 225729269 . C . . LowGQX END=225729393 GT ./. chr2 225729582 . C . . LowGQX END=225729805 GT ./. chr2 225738712 . C . . LowGQX END=225738869 GT ./. chr2 225738975 . T . . LowGQX END=225739075 GT ./. chr2 225739376 . T . . LowGQX END=225739476 GT ./. chr2 225740754 . C . . LowGQX END=225740939 GT ./. chr2 225750387 . C . . LowGQX END=225750523 GT ./. chr2 225750779 . C . . LowGQX END=225750903 GT ./. chr2 225751162 . A . . LowGQX END=225751262 GT ./. chr2 225758315 . T . . LowGQX END=225758415 GT ./. chr2 225761003 . G . . LowGQX END=225761103 GT ./. chr2 225781407 . T . . LowGQX END=225781507 GT ./. chr2 225796265 . C . . LowGQX END=225796386 GT ./. chr2 225811563 . C . . LowGQX END=225811669 GT ./. chr2 225848476 . G . . LowGQX END=225848576 GT ./. chr2 225906927 . C . . LowGQX END=225907092 GT ./. chr2 226273596 . C . . LowGQX END=226273818 GT ./. chr2 226378086 . G . . LowGQX END=226378389 GT ./. chr2 226446656 . G . . LowGQX END=226447752 GT ./. chr2 226491632 . G . . LowGQX END=226491847 GT ./. chr2 226516087 . G . . LowGQX END=226516282 GT ./. chr2 226593899 . A . . LowGQX END=226593999 GT ./. chr2 227659675 . G . . LowGQX END=227663506 GT ./. chr2 227729408 . C . . LowGQX END=227729845 GT ./. chr2 227731900 . A . . LowGQX END=227732037 GT ./. chr2 227771440 . A . . LowGQX END=227771738 GT ./. chr2 227773517 . G . . LowGQX END=227773617 GT ./. chr2 227778922 . A . . LowGQX END=227779070 GT ./. chr2 227807141 . G . . LowGQX END=227807301 GT ./. chr2 227853047 . G . . LowGQX END=227853164 GT ./. chr2 227860085 . T . . LowGQX END=227860243 GT ./. chr2 227871990 . T . . LowGQX END=227872356 GT ./. chr2 227872683 . G . . LowGQX END=227873072 GT ./. chr2 227874978 . C . . LowGQX END=227875269 GT ./. chr2 227876846 . C . . LowGQX END=227877065 GT ./. chr2 227886713 . A . . LowGQX END=227886941 GT ./. chr2 227887134 . T . . LowGQX END=227887234 GT ./. chr2 227890473 . G . . LowGQX END=227890573 GT ./. chr2 227892505 . A . . LowGQX END=227892777 GT ./. chr2 227895108 . G . . LowGQX END=227895366 GT ./. chr2 227896610 . C . . LowGQX END=227897044 GT ./. chr2 227898072 . T . . LowGQX END=227898249 GT ./. chr2 227906813 . G . . LowGQX END=227907023 GT ./. chr2 227907742 . C . . LowGQX END=227907952 GT ./. chr2 227912138 . T . . LowGQX END=227912317 GT ./. chr2 227914726 . G . . LowGQX END=227914899 GT ./. chr2 227915642 . A . . LowGQX END=227915926 GT ./. chr2 227916970 . C . . LowGQX END=227917180 GT ./. chr2 227919259 . T . . LowGQX END=227919505 GT ./. chr2 227920610 . G . . LowGQX END=227920883 GT ./. chr2 227922104 . T . . LowGQX END=227922368 GT ./. chr2 227924070 . T . . LowGQX END=227924391 GT ./. chr2 227924801 . A . . LowGQX END=227925011 GT ./. chr2 227927190 . T . . LowGQX END=227927366 GT ./. chr2 227942569 . C . . LowGQX END=227942845 GT ./. chr2 227945108 . A . . LowGQX END=227945317 GT ./. chr2 227946777 . G . . LowGQX END=227946955 GT ./. chr2 227953318 . C . . LowGQX END=227953584 GT ./. chr2 227954533 . T . . LowGQX END=227954725 GT ./. chr2 227958780 . T . . LowGQX END=227959057 GT ./. chr2 227963359 . G . . LowGQX END=227963566 GT ./. chr2 227964281 . C . . LowGQX END=227964457 GT ./. chr2 227966169 . T . . LowGQX END=227966325 GT ./. chr2 227966530 . T . . LowGQX END=227966677 GT ./. chr2 227967445 . T . . LowGQX END=227967616 GT ./. chr2 227967809 . A . . LowGQX END=227967955 GT ./. chr2 227968637 . A . . LowGQX END=227968899 GT ./. chr2 227973246 . G . . LowGQX END=227973390 GT ./. chr2 227973498 . C . . LowGQX END=227973637 GT ./. chr2 227973801 . A . . LowGQX END=227974054 GT ./. chr2 227974136 . A . . LowGQX END=227974236 GT ./. chr2 227976343 . T . . LowGQX END=227976482 GT ./. chr2 227979244 . C . . LowGQX END=227979464 GT ./. chr2 227983310 . C . . LowGQX END=227983529 GT ./. chr2 227984560 . T . . LowGQX END=227984707 GT ./. chr2 227985495 . A . . LowGQX END=227985595 GT ./. chr2 227985679 . A . . LowGQX END=227985916 GT ./. chr2 228004826 . A . . LowGQX END=228005006 GT ./. chr2 228009181 . T . . LowGQX END=228009326 GT ./. chr2 228011963 . G . . LowGQX END=228012251 GT ./. chr2 228029332 . G . . LowGQX END=228029581 GT ./. chr2 228033845 . G . . LowGQX END=228034005 GT ./. chr2 228102622 . C . . LowGQX END=228102792 GT ./. chr2 228104808 . G . . LowGQX END=228105000 GT ./. chr2 228108978 . T . . LowGQX END=228109132 GT ./. chr2 228109504 . G . . LowGQX END=228109604 GT ./. chr2 228109613 . A . . LowGQX END=228109763 GT ./. chr2 228110619 . A . . LowGQX END=228110784 GT ./. chr2 228111338 . A . . LowGQX END=228111604 GT ./. chr2 228112223 . G . . LowGQX END=228112352 GT ./. chr2 228113002 . T . . LowGQX END=228113102 GT ./. chr2 228113105 . G . . LowGQX END=228113288 GT ./. chr2 228115797 . C . . LowGQX END=228115970 GT ./. chr2 228115980 . A . . LowGQX END=228116139 GT ./. chr2 228117961 . T . . LowGQX END=228118105 GT ./. chr2 228118128 . T . . LowGQX END=228118406 GT ./. chr2 228118769 . T . . LowGQX END=228118942 GT ./. chr2 228119321 . A . . LowGQX END=228119483 GT ./. chr2 228120691 . A . . LowGQX END=228120838 GT ./. chr2 228121008 . G . . LowGQX END=228121164 GT ./. chr2 228121208 . A . . LowGQX END=228121308 GT ./. chr2 228122268 . T . . LowGQX END=228122412 GT ./. chr2 228124449 . T . . LowGQX END=228124651 GT ./. chr2 228124730 . T . . LowGQX END=228124830 GT ./. chr2 228125726 . C . . LowGQX END=228125885 GT ./. chr2 228128443 . T . . LowGQX END=228128712 GT ./. chr2 228131082 . A . . LowGQX END=228131277 GT ./. chr2 228131658 . C . . LowGQX END=228131856 GT ./. chr2 228134575 . C . . LowGQX END=228134748 GT ./. chr2 228135435 . A . . LowGQX END=228135502 GT ./. chr2 228135503 . G . . LowGQX END=228135720;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 228137604 . T . . LowGQX END=228137885 GT ./. chr2 228141050 . A . . LowGQX END=228141245 GT ./. chr2 228142114 . G . . LowGQX END=228142321 GT ./. chr2 228144458 . T . . LowGQX END=228144658 GT ./. chr2 228145105 . A . . LowGQX END=228145358 GT ./. chr2 228145558 . C . . LowGQX END=228145774 GT ./. chr2 228147030 . T . . LowGQX END=228147300 GT ./. chr2 228148432 . T . . LowGQX END=228148624 GT ./. chr2 228148876 . A . . LowGQX END=228149113 GT ./. chr2 228153815 . T . . LowGQX END=228154016 GT ./. chr2 228154664 . A . . LowGQX END=228154856 GT ./. chr2 228155412 . C . . LowGQX END=228155654 GT ./. chr2 228157856 . C . . LowGQX END=228158085 GT ./. chr2 228158419 . G . . LowGQX END=228158519 GT ./. chr2 228159155 . C . . LowGQX END=228159338 GT ./. chr2 228159629 . C . . LowGQX END=228159830 GT ./. chr2 228159929 . A . . LowGQX END=228160084 GT ./. chr2 228162339 . A . . LowGQX END=228162627 GT ./. chr2 228163347 . A . . LowGQX END=228163580 GT ./. chr2 228167700 . A . . LowGQX END=228167878 GT ./. chr2 228168524 . G . . LowGQX END=228168912 GT ./. chr2 228169650 . T . . LowGQX END=228169851 GT ./. chr2 228172375 . G . . LowGQX END=228172687 GT ./. chr2 228173564 . G . . LowGQX END=228173844 GT ./. chr2 228173869 . T . . LowGQX END=228174086 GT ./. chr2 228175441 . T . . LowGQX END=228175716 GT ./. chr2 228176451 . T . . LowGQX END=228176674 GT ./. chr2 228194370 . A . . LowGQX END=228194531 GT ./. chr2 228195340 . A . . LowGQX END=228195565 GT ./. chr2 228197133 . A . . LowGQX END=228197307 GT ./. chr2 228205003 . A . . LowGQX END=228205103 GT ./. chr2 228207449 . T . . LowGQX END=228207549 GT ./. chr2 228211940 . A . . LowGQX END=228212103 GT ./. chr2 228217210 . C . . LowGQX END=228217310 GT ./. chr2 228220386 . T . . LowGQX END=228220486 GT ./. chr2 228221700 . A . . LowGQX END=228221836 GT ./. chr2 228228438 . A . . LowGQX END=228228731 GT ./. chr2 228230807 . A . . LowGQX END=228230963 GT ./. chr2 228235614 . G . . LowGQX END=228235714 GT ./. chr2 228243800 . A . . LowGQX END=228243987 GT ./. chr2 228337136 . C . . LowGQX END=228337325 GT ./. chr2 228356201 . G . . LowGQX END=228356360 GT ./. chr2 228373304 . T . . LowGQX END=228373404 GT ./. chr2 228384612 . C . . LowGQX END=228384832 GT ./. chr2 228388477 . A . . LowGQX END=228388644 GT ./. chr2 228389476 . A . . LowGQX END=228389634 GT ./. chr2 228395805 . A . . LowGQX END=228395929 GT ./. chr2 228396840 . T . . LowGQX END=228396940 GT ./. chr2 228398263 . A . . LowGQX END=228398477 GT ./. chr2 228399559 . A . . LowGQX END=228399744 GT ./. chr2 228401331 . T . . LowGQX END=228401431 GT ./. chr2 228401614 . A . . LowGQX END=228401714 GT ./. chr2 228414689 . C . . LowGQX END=228414849 GT ./. chr2 228416673 . A . . LowGQX END=228416836 GT ./. chr2 228418416 . C . . LowGQX END=228418516 GT ./. chr2 228419132 . T . . LowGQX END=228419232 GT ./. chr2 228476108 . A . . LowGQX END=228476375 GT ./. chr2 228477653 . T . . LowGQX END=228477753 GT ./. chr2 228493081 . T . . LowGQX END=228493241 GT ./. chr2 228497683 . A . . LowGQX END=228497804 GT ./. chr2 228550766 . A . . LowGQX END=228550926 GT ./. chr2 228552062 . C . . LowGQX END=228552341 GT ./. chr2 228552831 . T . . LowGQX END=228553075 GT ./. chr2 228560554 . C . . LowGQX END=228560849 GT ./. chr2 228563401 . G . . LowGQX END=228564332 GT ./. chr2 228565628 . C . . LowGQX END=228565866 GT ./. chr2 228566834 . T . . LowGQX END=228567086 GT ./. chr2 228678616 . G . . LowGQX END=228678716 GT ./. chr2 228680168 . A . . LowGQX END=228680287 GT ./. chr2 228681012 . T . . LowGQX END=228681112 GT ./. chr2 228681739 . T . . LowGQX END=228681839 GT ./. chr2 228736376 . C . . LowGQX END=228736476 GT ./. chr2 228741135 . T . . LowGQX END=228741235 GT ./. chr2 228750054 . T . . LowGQX END=228750154 GT ./. chr2 228754570 . A . . LowGQX END=228754719 GT ./. chr2 228755951 . G . . LowGQX END=228756051 GT ./. chr2 228758509 . A . . LowGQX END=228758636 GT ./. chr2 228762896 . A . . LowGQX END=228763000 GT ./. chr2 228767716 . A . . LowGQX END=228767828 GT ./. chr2 228769643 . A . . LowGQX END=228769754 GT ./. chr2 228770950 . A . . LowGQX END=228771057 GT ./. chr2 228771852 . A . . LowGQX END=228771971 GT ./. chr2 228776969 . G . . LowGQX END=228777158 GT ./. chr2 228783485 . C . . LowGQX END=228783585 GT ./. chr2 228786113 . A . . LowGQX END=228786280 GT ./. chr2 228788618 . A . . LowGQX END=228788718 GT ./. chr2 228846431 . T . . LowGQX END=228846579 GT ./. chr2 228855714 . A . . LowGQX END=228855903 GT ./. chr2 228855967 . A . . LowGQX END=228856067 GT ./. chr2 228858243 . T . . LowGQX END=228858343 GT ./. chr2 228860203 . A . . LowGQX END=228860413 GT ./. chr2 228881120 . A . . LowGQX END=228884875 GT ./. chr2 228886425 . A . . LowGQX END=228886685 GT ./. chr2 228890108 . A . . LowGQX END=228890247 GT ./. chr2 228892180 . G . . LowGQX END=228892280 GT ./. chr2 228973496 . T . . LowGQX END=228973658 GT ./. chr2 228996694 . A . . LowGQX END=228996804 GT ./. chr2 229046249 . C . . LowGQX END=229046349 GT ./. chr2 229890346 . A . . LowGQX END=229890827 GT ./. chr2 230020532 . A . . LowGQX END=230020683 GT ./. chr2 230092684 . C . . LowGQX END=230092784 GT ./. chr2 230096591 . A . . LowGQX END=230096771 GT ./. chr2 230127398 . C . . LowGQX END=230127522 GT ./. chr2 230135695 . T . . LowGQX END=230135795 GT ./. chr2 230223254 . G . . LowGQX END=230223370 GT ./. chr2 230231587 . A . . LowGQX END=230231838 GT ./. chr2 230252979 . A . . LowGQX END=230253115 GT ./. chr2 230271946 . G . . LowGQX END=230272064 GT ./. chr2 230282822 . A . . LowGQX END=230282949 GT ./. chr2 230312030 . A . . LowGQX END=230312259 GT ./. chr2 230341854 . A . . LowGQX END=230341972 GT ./. chr2 230377497 . A . . LowGQX END=230377655 GT ./. chr2 230411661 . A . . LowGQX END=230411811 GT ./. chr2 230450522 . A . . LowGQX END=230450743 GT ./. chr2 230453108 . A . . LowGQX END=230453208 GT ./. chr2 230456294 . A . . LowGQX END=230456607 GT ./. chr2 230578851 . C . . LowGQX END=230579151 GT ./. chr2 230632268 . G . . LowGQX END=230632469 GT ./. chr2 230633280 . C . . LowGQX END=230633438 GT ./. chr2 230633945 . A . . LowGQX END=230634045 GT ./. chr2 230636233 . A . . LowGQX END=230636351 GT ./. chr2 230638811 . A . . LowGQX END=230638980 GT ./. chr2 230642029 . A . . LowGQX END=230642198 GT ./. chr2 230643147 . A . . LowGQX END=230643306 GT ./. chr2 230643590 . A . . LowGQX END=230643709 GT ./. chr2 230650471 . A . . LowGQX END=230650574 GT ./. chr2 230652219 . A . . LowGQX END=230652380 GT ./. chr2 230653512 . A . . LowGQX END=230653659 GT ./. chr2 230654325 . A . . LowGQX END=230654481 GT ./. chr2 230655838 . A . . LowGQX END=230655970 GT ./. chr2 230656580 . G . . LowGQX END=230656784 GT ./. chr2 230656856 . T . . LowGQX END=230656956 GT ./. chr2 230657687 . A . . LowGQX END=230657864 GT ./. chr2 230659893 . A . . LowGQX END=230660049 GT ./. chr2 230661305 . A . . LowGQX END=230661501 GT ./. chr2 230662404 . A . . LowGQX END=230662550 GT ./. chr2 230663589 . A . . LowGQX END=230663768 GT ./. chr2 230663997 . A . . LowGQX END=230664102 GT ./. chr2 230666966 . A . . LowGQX END=230667178 GT ./. chr2 230668285 . A . . LowGQX END=230668408 GT ./. chr2 230668713 . A . . LowGQX END=230668946 GT ./. chr2 230670444 . A . . LowGQX END=230670600 GT ./. chr2 230672325 . T . . LowGQX END=230672583 GT ./. chr2 230672966 . A . . LowGQX END=230673088 GT ./. chr2 230675594 . A . . LowGQX END=230675764 GT ./. chr2 230675837 . A . . LowGQX END=230675937 GT ./. chr2 230678584 . A . . LowGQX END=230678750 GT ./. chr2 230678946 . T . . LowGQX END=230679046 GT ./. chr2 230679813 . A . . LowGQX END=230679913 GT ./. chr2 230679957 . T . . LowGQX END=230680057 GT ./. chr2 230683078 . A . . LowGQX END=230683231 GT ./. chr2 230693907 . A . . LowGQX END=230694007 GT ./. chr2 230695463 . T . . LowGQX END=230695563 GT ./. chr2 230695801 . T . . LowGQX END=230695901 GT ./. chr2 230701502 . C . . LowGQX END=230701703 GT ./. chr2 230705536 . A . . LowGQX END=230705696 GT ./. chr2 230723486 . A . . LowGQX END=230724293 GT ./. chr2 230725121 . C . . LowGQX END=230725248 GT ./. chr2 230744637 . G . . LowGQX END=230744798 GT ./. chr2 230787228 . A . . LowGQX END=230787328 GT ./. chr2 230797551 . C . . LowGQX END=230797651 GT ./. chr2 230840955 . A . . LowGQX END=230841131 GT ./. chr2 230861465 . A . . LowGQX END=230861642 GT ./. chr2 230875410 . A . . LowGQX END=230875603 GT ./. chr2 230889556 . T . . LowGQX END=230889719 GT ./. chr2 230902094 . T . . LowGQX END=230902250 GT ./. chr2 230910373 . T . . LowGQX END=230911441 GT ./. chr2 230914475 . A . . LowGQX END=230914623 GT ./. chr2 230923808 . A . . LowGQX END=230924071 GT ./. chr2 230931315 . A . . LowGQX END=230931482 GT ./. chr2 231025232 . G . . LowGQX END=231025332 GT ./. chr2 231033789 . C . . LowGQX END=231034005 GT ./. chr2 231035286 . A . . LowGQX END=231035529 GT ./. chr2 231036361 . C . . LowGQX END=231036535 GT ./. chr2 231036731 . T . . LowGQX END=231036942 GT ./. chr2 231037509 . C . . LowGQX END=231037727 GT ./. chr2 231041330 . C . . LowGQX END=231041492 GT ./. chr2 231042203 . T . . LowGQX END=231042448 GT ./. chr2 231042822 . A . . LowGQX END=231043023 GT ./. chr2 231048237 . G . . LowGQX END=231048408 GT ./. chr2 231050659 . G . . LowGQX END=231050911 GT ./. chr2 231065550 . A . . LowGQX END=231065733 GT ./. chr2 231067244 . G . . LowGQX END=231067496 GT ./. chr2 231072655 . C . . LowGQX END=231072826 GT ./. chr2 231074595 . G . . LowGQX END=231074775 GT ./. chr2 231076134 . A . . LowGQX END=231076320 GT ./. chr2 231077011 . T . . LowGQX END=231077197 GT ./. chr2 231077425 . A . . LowGQX END=231077794 GT ./. chr2 231079614 . T . . LowGQX END=231079885 GT ./. chr2 231081445 . A . . LowGQX END=231081694 GT ./. chr2 231086368 . G . . LowGQX END=231086468 GT ./. chr2 231090480 . C . . LowGQX END=231090640 GT ./. chr2 231101796 . A . . LowGQX END=231102016 GT ./. chr2 231102926 . A . . LowGQX END=231103116 GT ./. chr2 231103474 . A . . LowGQX END=231103591 GT ./. chr2 231106057 . A . . LowGQX END=231106211 GT ./. chr2 231108437 . T . . LowGQX END=231108537 GT ./. chr2 231109700 . C . . LowGQX END=231109800 GT ./. chr2 231110567 . T . . LowGQX END=231110667 GT ./. chr2 231112629 . A . . LowGQX END=231112783 GT ./. chr2 231113592 . A . . LowGQX END=231113692 GT ./. chr2 231115687 . T . . LowGQX END=231115787 GT ./. chr2 231118029 . A . . LowGQX END=231118135 GT ./. chr2 231120158 . T . . LowGQX END=231120258 GT ./. chr2 231134184 . G . . LowGQX END=231134341 GT ./. chr2 231134550 . A . . LowGQX END=231134671 GT ./. chr2 231135278 . C . . LowGQX END=231135378 GT ./. chr2 231135489 . G . . LowGQX END=231135589 GT ./. chr2 231148989 . T . . LowGQX END=231149144 GT ./. chr2 231150458 . T . . LowGQX END=231150558 GT ./. chr2 231152595 . C . . LowGQX END=231152695 GT ./. chr2 231155123 . G . . LowGQX END=231155282 GT ./. chr2 231157359 . A . . LowGQX END=231157506 GT ./. chr2 231158960 . T . . LowGQX END=231159060 GT ./. chr2 231162107 . A . . LowGQX END=231162207 GT ./. chr2 231174637 . A . . LowGQX END=231174757 GT ./. chr2 231175403 . A . . LowGQX END=231175569 GT ./. chr2 231175858 . T . . LowGQX END=231175958 GT ./. chr2 231176134 . T . . LowGQX END=231176313 GT ./. chr2 231177299 . A . . LowGQX END=231177459 GT ./. chr2 231191951 . G . . LowGQX END=231192051 GT ./. chr2 231193459 . A . . LowGQX END=231193559 GT ./. chr2 231222519 . G . . LowGQX END=231222709 GT ./. chr2 231223678 . G . . LowGQX END=231223868 GT ./. chr2 231226268 . C . . LowGQX END=231226421 GT ./. chr2 231235603 . C . . LowGQX END=231235703 GT ./. chr2 231236242 . T . . LowGQX END=231236397 GT ./. chr2 231248208 . T . . LowGQX END=231248308 GT ./. chr2 231249929 . C . . LowGQX END=231250029 GT ./. chr2 231253261 . T . . LowGQX END=231253361 GT ./. chr2 231254583 . G . . LowGQX END=231254739 GT ./. chr2 231256801 . G . . LowGQX END=231256945 GT ./. chr2 231258048 . A . . LowGQX END=231258203 GT ./. chr2 231261443 . A . . LowGQX END=231261543 GT ./. chr2 231264841 . G . . LowGQX END=231264962 GT ./. chr2 231265614 . A . . LowGQX END=231265779 GT ./. chr2 231266070 . T . . LowGQX END=231266170 GT ./. chr2 231266337 . G . . LowGQX END=231266523 GT ./. chr2 231267452 . A . . LowGQX END=231267612 GT ./. chr2 231280920 . G . . LowGQX END=231281078 GT ./. chr2 231282294 . T . . LowGQX END=231282394 GT ./. chr2 231305222 . T . . LowGQX END=231305322 GT ./. chr2 231307630 . A . . LowGQX END=231307817 GT ./. chr2 231308891 . A . . LowGQX END=231309064 GT ./. chr2 231311526 . C . . LowGQX END=231311626 GT ./. chr2 231313785 . C . . LowGQX END=231313885 GT ./. chr2 231314013 . A . . LowGQX END=231314113 GT ./. chr2 231314274 . A . . LowGQX END=231314428 GT ./. chr2 231314879 . A . . LowGQX END=231314979 GT ./. chr2 231325975 . A . . LowGQX END=231326132 GT ./. chr2 231327148 . A . . LowGQX END=231327278 GT ./. chr2 231328774 . T . . LowGQX END=231328874 GT ./. chr2 231330993 . G . . LowGQX END=231331093 GT ./. chr2 231331833 . A . . LowGQX END=231331933 GT ./. chr2 231333735 . T . . LowGQX END=231333835 GT ./. chr2 231334117 . A . . LowGQX END=231334217 GT ./. chr2 231334481 . A . . LowGQX END=231334581 GT ./. chr2 231334728 . A . . LowGQX END=231334828 GT ./. chr2 231338037 . A . . LowGQX END=231338158 GT ./. chr2 231339027 . T . . LowGQX END=231339186 GT ./. chr2 231359049 . G . . LowGQX END=231359204 GT ./. chr2 231363104 . T . . LowGQX END=231363264 GT ./. chr2 231367754 . A . . LowGQX END=231367854 GT ./. chr2 231368899 . A . . LowGQX END=231369008 GT ./. chr2 231371016 . A . . LowGQX END=231371163 GT ./. chr2 231372684 . T . . LowGQX END=231372784 GT ./. chr2 231375758 . A . . LowGQX END=231375911 GT ./. chr2 231379808 . A . . LowGQX END=231380358 GT ./. chr2 231403980 . A . . LowGQX END=231404100 GT ./. chr2 231405589 . A . . LowGQX END=231405714 GT ./. chr2 231406002 . T . . LowGQX END=231406102 GT ./. chr2 231406605 . A . . LowGQX END=231406805 GT ./. chr2 231407549 . A . . LowGQX END=231407664 GT ./. chr2 231624715 . T . . LowGQX END=231624833 GT ./. chr2 231655585 . A . . LowGQX END=231655754 GT ./. chr2 231657926 . A . . LowGQX END=231658049 GT ./. chr2 231663442 . A . . LowGQX END=231663615 GT ./. chr2 231674906 . G . . LowGQX END=231675058 GT ./. chr2 231678692 . T . . LowGQX END=231678847 GT ./. chr2 231682467 . A . . LowGQX END=231682657 GT ./. chr2 231683229 . A . . LowGQX END=231683422 GT ./. chr2 231729739 . C . . LowGQX END=231729863 GT ./. chr2 231738130 . A . . LowGQX END=231738310 GT ./. chr2 231740333 . A . . LowGQX END=231740526 GT ./. chr2 231741570 . A . . LowGQX END=231741685 GT ./. chr2 231742113 . A . . LowGQX END=231742268 GT ./. chr2 231742660 . C . . LowGQX END=231742819 GT ./. chr2 231774716 . C . . LowGQX END=231775680 GT ./. chr2 231860948 . C . . LowGQX END=231861250 GT ./. chr2 231865080 . G . . LowGQX END=231865253 GT ./. chr2 231867398 . G . . LowGQX END=231867512 GT ./. chr2 231902269 . G . . LowGQX END=231902915 GT ./. chr2 231906010 . G . . LowGQX END=231906125 GT ./. chr2 231911596 . G . . LowGQX END=231911954 GT ./. chr2 231921638 . G . . LowGQX END=231921798 GT ./. chr2 231925953 . T . . LowGQX END=231926053 GT ./. chr2 231926949 . T . . LowGQX END=231927049 GT ./. chr2 231927218 . A . . LowGQX END=231927408 GT ./. chr2 231931618 . A . . LowGQX END=231931828 GT ./. chr2 231934737 . A . . LowGQX END=231934885 GT ./. chr2 231936901 . A . . LowGQX END=231937132 GT ./. chr2 231940206 . T . . LowGQX END=231940306 GT ./. chr2 231941706 . A . . LowGQX END=231941879 GT ./. chr2 231943368 . T . . LowGQX END=231943468 GT ./. chr2 231944240 . T . . LowGQX END=231944340 GT ./. chr2 231944853 . A . . LowGQX END=231945031 GT ./. chr2 231947595 . A . . LowGQX END=231947711 GT ./. chr2 231948278 . C . . LowGQX END=231948480 GT ./. chr2 231949731 . A . . LowGQX END=231949831 GT ./. chr2 231951814 . T . . LowGQX END=231951914 GT ./. chr2 231973180 . C . . LowGQX END=231974175 GT ./. chr2 231978392 . G . . LowGQX END=231978695 GT ./. chr2 231988076 . A . . LowGQX END=231988530 GT ./. chr2 232003448 . A . . LowGQX END=232003664 GT ./. chr2 232010952 . A . . LowGQX END=232011073 GT ./. chr2 232018226 . G . . LowGQX END=232018383 GT ./. chr2 232026052 . A . . LowGQX END=232026226 GT ./. chr2 232028346 . C . . LowGQX END=232028446 GT ./. chr2 232029908 . C . . LowGQX END=232030008 GT ./. chr2 232030583 . A . . LowGQX END=232030734 GT ./. chr2 232035278 . A . . LowGQX END=232035429 GT ./. chr2 232070870 . G . . LowGQX END=232071028 GT ./. chr2 232072838 . A . . LowGQX END=232073018 GT ./. chr2 232079542 . A . . LowGQX END=232079717 GT ./. chr2 232081349 . A . . LowGQX END=232081509 GT ./. chr2 232087438 . T . . LowGQX END=232087538 GT ./. chr2 232091395 . T . . LowGQX END=232091550 GT ./. chr2 232099935 . A . . LowGQX END=232100097 GT ./. chr2 232104634 . T . . LowGQX END=232104833 GT ./. chr2 232121267 . C . . LowGQX END=232121367 GT ./. chr2 232123682 . T . . LowGQX END=232123818 GT ./. chr2 232127016 . C . . LowGQX END=232127116 GT ./. chr2 232135342 . T . . LowGQX END=232135442 GT ./. chr2 232135691 . C . . LowGQX END=232135791 GT ./. chr2 232137666 . A . . LowGQX END=232137794 GT ./. chr2 232141347 . A . . LowGQX END=232141491 GT ./. chr2 232143084 . G . . LowGQX END=232143184 GT ./. chr2 232146760 . C . . LowGQX END=232146860 GT ./. chr2 232153326 . T . . LowGQX END=232153426 GT ./. chr2 232156062 . C . . LowGQX END=232156162 GT ./. chr2 232160889 . T . . LowGQX END=232160989 GT ./. chr2 232196503 . A . . LowGQX END=232196612 GT ./. chr2 232209635 . C . . LowGQX END=232209865 GT ./. chr2 232220509 . G . . LowGQX END=232220647 GT ./. chr2 232225391 . A . . LowGQX END=232225618 GT ./. chr2 232234663 . G . . LowGQX END=232234841 GT ./. chr2 232235710 . A . . LowGQX END=232235810 GT ./. chr2 232245549 . A . . LowGQX END=232245649 GT ./. chr2 232260410 . C . . LowGQX END=232260570 GT ./. chr2 232262441 . G . . LowGQX END=232263637 GT ./. chr2 232317247 . G . . LowGQX END=232317522 GT ./. chr2 232317780 . T . . LowGQX END=232317880 GT ./. chr2 232319891 . A . . LowGQX END=232319991 GT ./. chr2 232320110 . A . . LowGQX END=232320338 GT ./. chr2 232320511 . G . . LowGQX END=232320648 GT ./. chr2 232320719 . A . . LowGQX END=232320850 GT ./. chr2 232321145 . G . . LowGQX END=232321245 GT ./. chr2 232321340 . A . . LowGQX END=232321478 GT ./. chr2 232321710 . A . . LowGQX END=232321838 GT ./. chr2 232321983 . A . . LowGQX END=232322083 GT ./. chr2 232322352 . A . . LowGQX END=232322514 GT ./. chr2 232322975 . A . . LowGQX END=232323103 GT ./. chr2 232323710 . A . . LowGQX END=232323839 GT ./. chr2 232324861 . A . . LowGQX END=232325007 GT ./. chr2 232325067 . A . . LowGQX END=232325167 GT ./. chr2 232325183 . A . . LowGQX END=232325283 GT ./. chr2 232325378 . A . . LowGQX END=232325580 GT ./. chr2 232326249 . A . . LowGQX END=232326823 GT ./. chr2 232327214 . A . . LowGQX END=232327314 GT ./. chr2 232327909 . A . . LowGQX END=232328079 GT ./. chr2 232329006 . A . . LowGQX END=232329106 GT ./. chr2 232373762 . T . . LowGQX END=232374057 GT ./. chr2 232378206 . T . . LowGQX END=232378306 GT ./. chr2 232389752 . A . . LowGQX END=232390139 GT ./. chr2 232392832 . A . . LowGQX END=232393731 GT ./. chr2 232394962 . G . . LowGQX END=232395122 GT ./. chr2 232457661 . A . . LowGQX END=232458853 GT ./. chr2 232572401 . C . . LowGQX END=232572561 GT ./. chr2 232573335 . A . . LowGQX END=232573490 GT ./. chr2 232574838 . A . . LowGQX END=232575012 GT ./. chr2 232575115 . C . . LowGQX END=232575387 GT ./. chr2 232576044 . C . . LowGQX END=232576144 GT ./. chr2 232576536 . G . . LowGQX END=232576755 GT ./. chr2 232577140 . T . . LowGQX END=232577240 GT ./. chr2 232577488 . G . . LowGQX END=232577588 GT ./. chr2 232578017 . A . . LowGQX END=232578117 GT ./. chr2 232597653 . A . . LowGQX END=232597753 GT ./. chr2 232601895 . A . . LowGQX END=232602005 GT ./. chr2 232602721 . A . . LowGQX END=232602851 GT ./. chr2 232603805 . A . . LowGQX END=232603905 GT ./. chr2 232603949 . T . . LowGQX END=232604049 GT ./. chr2 232645690 . G . . LowGQX END=232645850 GT ./. chr2 232646514 . C . . LowGQX END=232646614 GT ./. chr2 232653279 . G . . LowGQX END=232653445 GT ./. chr2 232655632 . T . . LowGQX END=232655732 GT ./. chr2 232656431 . T . . LowGQX END=232656531 GT ./. chr2 232656727 . T . . LowGQX END=232656827 GT ./. chr2 232658968 . A . . LowGQX END=232659068 GT ./. chr2 232660814 . A . . LowGQX END=232661021 GT ./. chr2 232663567 . A . . LowGQX END=232663677 GT ./. chr2 232665834 . T . . LowGQX END=232665934 GT ./. chr2 232672195 . A . . LowGQX END=232672358 GT ./. chr2 232673131 . G . . LowGQX END=232673283 GT ./. chr2 232790133 . C . . LowGQX END=232790428 GT ./. chr2 232790865 . C . . LowGQX END=232791017 GT ./. chr2 232879614 . A . . LowGQX END=232879714 GT ./. chr2 232880222 . A . . LowGQX END=232880384 GT ./. chr2 232888964 . A . . LowGQX END=232889115 GT ./. chr2 232894687 . A . . LowGQX END=232894847 GT ./. chr2 232952195 . A . . LowGQX END=232952434 GT ./. chr2 232975896 . C . . LowGQX END=232975996 GT ./. chr2 232995327 . A . . LowGQX END=232995478 GT ./. chr2 233001180 . A . . LowGQX END=233001434 GT ./. chr2 233028167 . A . . LowGQX END=233028345 GT ./. chr2 233037361 . G . . LowGQX END=233037513 GT ./. chr2 233075026 . T . . LowGQX END=233075126 GT ./. chr2 233103241 . A . . LowGQX END=233103358 GT ./. chr2 233113947 . A . . LowGQX END=233114059 GT ./. chr2 233127915 . A . . LowGQX END=233128153 GT ./. chr2 233164740 . C . . LowGQX END=233164840 GT ./. chr2 233194521 . A . . LowGQX END=233194709 GT ./. chr2 233195394 . T . . LowGQX END=233195494 GT ./. chr2 233198548 . A . . LowGQX END=233198700 GT ./. chr2 233199077 . A . . LowGQX END=233199212 GT ./. chr2 233199339 . A . . LowGQX END=233199448 GT ./. chr2 233200481 . A . . LowGQX END=233200587 GT ./. chr2 233200851 . G . . LowGQX END=233200965 GT ./. chr2 233201020 . G . . LowGQX END=233201436 GT ./. chr2 233204380 . A . . LowGQX END=233204480 GT ./. chr2 233205434 . G . . LowGQX END=233205638 GT ./. chr2 233208054 . G . . LowGQX END=233208286 GT ./. chr2 233243501 . T . . LowGQX END=233243601 GT ./. chr2 233243679 . A . . LowGQX END=233243800 GT ./. chr2 233243908 . A . . LowGQX END=233244028 GT ./. chr2 233244221 . A . . LowGQX END=233244400 GT ./. chr2 233244452 . T . . LowGQX END=233244649 GT ./. chr2 233244894 . A . . LowGQX END=233245033 GT ./. chr2 233245117 . T . . LowGQX END=233245217 GT ./. chr2 233245300 . C . . LowGQX END=233245470 GT ./. chr2 233245537 . G . . LowGQX END=233245744 GT ./. chr2 233245959 . A . . LowGQX END=233246080 GT ./. chr2 233246205 . A . . LowGQX END=233246508 GT ./. chr2 233271589 . C . . LowGQX END=233271689 GT ./. chr2 233271765 . A . . LowGQX END=233271886 GT ./. chr2 233271994 . A . . LowGQX END=233272114 GT ./. chr2 233272302 . A . . LowGQX END=233272481 GT ./. chr2 233272533 . T . . LowGQX END=233272730 GT ./. chr2 233272975 . A . . LowGQX END=233273114 GT ./. chr2 233273138 . G . . LowGQX END=233273298 GT ./. chr2 233273381 . C . . LowGQX END=233273551 GT ./. chr2 233273618 . G . . LowGQX END=233273825 GT ./. chr2 233273999 . A . . LowGQX END=233274161 GT ./. chr2 233274282 . A . . LowGQX END=233274585 GT ./. chr2 233320908 . A . . LowGQX END=233321178 GT ./. chr2 233321288 . A . . LowGQX END=233321408 GT ./. chr2 233321607 . A . . LowGQX END=233321786 GT ./. chr2 233321858 . A . . LowGQX END=233322035 GT ./. chr2 233322273 . A . . LowGQX END=233322412 GT ./. chr2 233322492 . T . . LowGQX END=233322592 GT ./. chr2 233322706 . A . . LowGQX END=233322845 GT ./. chr2 233322925 . A . . LowGQX END=233323121 GT ./. chr2 233323340 . A . . LowGQX END=233323461 GT ./. chr2 233323568 . A . . LowGQX END=233323859 GT ./. chr2 233344861 . G . . LowGQX END=233344965 GT ./. chr2 233345098 . G . . LowGQX END=233345198 GT ./. chr2 233345426 . A . . LowGQX END=233345526 GT ./. chr2 233345784 . A . . LowGQX END=233345884 GT ./. chr2 233346214 . A . . LowGQX END=233346343 GT ./. chr2 233346476 . C . . LowGQX END=233346576 GT ./. chr2 233347044 . C . . LowGQX END=233347340 GT ./. chr2 233347559 . A . . LowGQX END=233347667 GT ./. chr2 233347803 . G . . LowGQX END=233347903 GT ./. chr2 233348124 . A . . LowGQX END=233348227 GT ./. chr2 233348709 . A . . LowGQX END=233348751;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 233348752 . G . 33.01 LowGQX DP=4;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:3:4:3.01:60:3 chr2 233348753 . G . . LowGQX END=233348786;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:3:60 chr2 233348787 . T . 33.01 LowGQX DP=4;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:3:4:3.01:60:3 chr2 233348788 . G . . LowGQX END=233348810;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:3:60 chr2 233348811 . T . 36.01 LowGQX DP=4;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:3:4:6.02:60:6 chr2 233348812 . C . . LowGQX END=233348813;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:3:60 chr2 233348814 . T . 36.01 LowGQX DP=4;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:3:4:6.02:60:6 chr2 233348815 . G . . LowGQX END=233348879;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 233348880 . A . . LowGQX END=233348936 GT ./. chr2 233349180 . A . . LowGQX END=233349309 GT ./. chr2 233349508 . C . . LowGQX END=233349608 GT ./. chr2 233349689 . A . . LowGQX END=233349804 GT ./. chr2 233349894 . C . . LowGQX END=233349994 GT ./. chr2 233350576 . A . . LowGQX END=233351372 GT ./. chr2 233385267 . A . . LowGQX END=233385406 GT ./. chr2 233386030 . G . . LowGQX END=233386145 GT ./. chr2 233386501 . G . . LowGQX END=233386601 GT ./. chr2 233386680 . G . . LowGQX END=233386871 GT ./. chr2 233387224 . G . . LowGQX END=233387325 GT ./. chr2 233387401 . C . . LowGQX END=233387572 GT ./. chr2 233387699 . G . . LowGQX END=233387913 GT ./. chr2 233388125 . G . . LowGQX END=233388294 GT ./. chr2 233388431 . G . . LowGQX END=233388656 GT ./. chr2 233388678 . C . . LowGQX END=233389080 GT ./. chr2 233389447 . G . . LowGQX END=233389571 GT ./. chr2 233389921 . T . . LowGQX END=233390217 GT ./. chr2 233390794 . C . . LowGQX END=233391029 GT ./. chr2 233391188 . T . . LowGQX END=233391436 GT ./. chr2 233392053 . T . . LowGQX END=233392207 GT ./. chr2 233392921 . G . . LowGQX END=233393133 GT ./. chr2 233393160 . G . . LowGQX END=233393418 GT ./. chr2 233393521 . G . . LowGQX END=233393733 GT ./. chr2 233394598 . C . . LowGQX END=233394901 GT ./. chr2 233396011 . G . . LowGQX END=233396418 GT ./. chr2 233398590 . A . . LowGQX END=233398849 GT ./. chr2 233398850 . G . . LowGQX END=233398950;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 233398951 . T A 14.92 LowGQX;LowGQ DP=2;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;MQ=60;MQ0=0;QD=7.46;SB=-37.80;TI=NM_000751;GI=CHRND;FC=Missense_S424T;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,2:2:3.01:45,3,0:60:3:1.000 chr2 233398952 . C . . LowGQX END=233398962;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 233398963 . C . . LowGQX END=233399104 GT ./. chr2 233399789 . C . . LowGQX END=233401376 GT ./. chr2 233404385 . A . . LowGQX END=233404564 GT ./. chr2 233404651 . C . . LowGQX END=233404893 GT ./. chr2 233405040 . G . . LowGQX END=233405187 GT ./. chr2 233405261 . G . . LowGQX END=233405473 GT ./. chr2 233406033 . G . . LowGQX END=233406292 GT ./. chr2 233407082 . C . . LowGQX END=233407282 GT ./. chr2 233407541 . T . . LowGQX END=233407844 GT ./. chr2 233407934 . G . . LowGQX END=233408151 GT ./. chr2 233408244 . G . . LowGQX END=233408461 GT ./. chr2 233409026 . T . . LowGQX END=233409342 GT ./. chr2 233409431 . G . . LowGQX END=233409664 GT ./. chr2 233410202 . G . . LowGQX END=233410478 GT ./. chr2 233412816 . A . . LowGQX END=233414593 GT ./. chr2 233415335 . T . . LowGQX END=233415495 GT ./. chr2 233415877 . C . . LowGQX END=233415977 GT ./. chr2 233421124 . A . . LowGQX END=233421243 GT ./. chr2 233422592 . A . . LowGQX END=233422731 GT ./. chr2 233428955 . A . . LowGQX END=233429064 GT ./. chr2 233431496 . G . . LowGQX END=233431694 GT ./. chr2 233431786 . A . . LowGQX END=233431962 GT ./. chr2 233433642 . G . . LowGQX END=233433742 GT ./. chr2 233438766 . G . . LowGQX END=233438866 GT ./. chr2 233438962 . T . . LowGQX END=233439062 GT ./. chr2 233445613 . G . . LowGQX END=233445835 GT ./. chr2 233470827 . G . . LowGQX END=233470927 GT ./. chr2 233498402 . G . . LowGQX END=233498722 GT ./. chr2 233503068 . G . . LowGQX END=233503168 GT ./. chr2 233527480 . C . . LowGQX END=233527662 GT ./. chr2 233536946 . G . . LowGQX END=233537156 GT ./. chr2 233546293 . A . . LowGQX END=233546432 GT ./. chr2 233599857 . G . . LowGQX END=233600000 GT ./. chr2 233612274 . A . . LowGQX END=233612506 GT ./. chr2 233613646 . T . . LowGQX END=233613844 GT ./. chr2 233620882 . T . . LowGQX END=233621096 GT ./. chr2 233625139 . T . . LowGQX END=233625353 GT ./. chr2 233626055 . A . . LowGQX END=233626198 GT ./. chr2 233630627 . T . . LowGQX END=233630727 GT ./. chr2 233632850 . T . . LowGQX END=233633575 GT ./. chr2 233635572 . G . . LowGQX END=233636124 GT ./. chr2 233641121 . G . . LowGQX END=233641225 GT ./. chr2 233651809 . G . . LowGQX END=233652091 GT ./. chr2 233653222 . C . . LowGQX END=233653322 GT ./. chr2 233655357 . A . . LowGQX END=233656208 GT ./. chr2 233659407 . C . . LowGQX END=233659706 GT ./. chr2 233660721 . G . . LowGQX END=233660983 GT ./. chr2 233671150 . T . . LowGQX END=233671419 GT ./. chr2 233674379 . T . . LowGQX END=233674573 GT ./. chr2 233675903 . G . . LowGQX END=233676113 GT ./. chr2 233677050 . T . . LowGQX END=233677253 GT ./. chr2 233680296 . C . . LowGQX END=233680499 GT ./. chr2 233681530 . T . . LowGQX END=233681794 GT ./. chr2 233684486 . G . . LowGQX END=233684747 GT ./. chr2 233697516 . C . . LowGQX END=233697855 GT ./. chr2 233704508 . T . . LowGQX END=233704733 GT ./. chr2 233708689 . T . . LowGQX END=233709017 GT ./. chr2 233709028 . T . . LowGQX END=233709336 GT ./. chr2 233710391 . A . . LowGQX END=233710648 GT ./. chr2 233712007 . C . . LowGQX END=233712333 GT ./. chr2 233714921 . A . . LowGQX END=233715171 GT ./. chr2 233721452 . G . . LowGQX END=233721622 GT ./. chr2 233723136 . A . . LowGQX END=233723288 GT ./. chr2 233734979 . T . . LowGQX END=233735139 GT ./. chr2 233740138 . C . . LowGQX END=233740266 GT ./. chr2 233740637 . C . . LowGQX END=233740848 GT ./. chr2 233740895 . C . . LowGQX END=233741114 GT ./. chr2 233744197 . G . . LowGQX END=233744392 GT ./. chr2 233745854 . A . . LowGQX END=233745963 GT ./. chr2 233746886 . G . . LowGQX END=233746986 GT ./. chr2 233748019 . A . . LowGQX END=233748179 GT ./. chr2 233748689 . A . . LowGQX END=233748857 GT ./. chr2 233749985 . T . . LowGQX END=233750085 GT ./. chr2 233752670 . C . . LowGQX END=233752831 GT ./. chr2 233755618 . C . . LowGQX END=233755718 GT ./. chr2 233756059 . A . . LowGQX END=233756200 GT ./. chr2 233757606 . A . . LowGQX END=233757763 GT ./. chr2 233759461 . C . . LowGQX END=233759629 GT ./. chr2 233770284 . C . . LowGQX END=233770624 GT ./. chr2 233784992 . A . . LowGQX END=233785298 GT ./. chr2 233791711 . C . . LowGQX END=233791899 GT ./. chr2 233792551 . A . . LowGQX END=233792710 GT ./. chr2 233834922 . A . . LowGQX END=233835092 GT ./. chr2 233839331 . A . . LowGQX END=233839603 GT ./. chr2 233877520 . A . . LowGQX END=233877680 GT ./. chr2 233877849 . G . . LowGQX END=233877958 GT ./. chr2 233880384 . C . . LowGQX END=233880484 GT ./. chr2 233897380 . C . . LowGQX END=233897585 GT ./. chr2 233898824 . A . . LowGQX END=233899770 GT ./. chr2 233925188 . C . . LowGQX END=233925323 GT ./. chr2 233944027 . G . . LowGQX END=233944127 GT ./. chr2 233986816 . G . . LowGQX END=233986968 GT ./. chr2 233990454 . G . . LowGQX END=233990630 GT ./. chr2 233995217 . G . . LowGQX END=233995362 GT ./. chr2 233995474 . A . . LowGQX END=233995574 GT ./. chr2 233998648 . G . . LowGQX END=233998748 GT ./. chr2 233998805 . C . . LowGQX END=233998905 GT ./. chr2 234053873 . T . . LowGQX END=234053973 GT ./. chr2 234054574 . G . . LowGQX END=234054674 GT ./. chr2 234054784 . G . . LowGQX END=234054889 GT ./. chr2 234054999 . G . . LowGQX END=234055099 GT ./. chr2 234056116 . G . . LowGQX END=234056241 GT ./. chr2 234066958 . G . . LowGQX END=234067066 GT ./. chr2 234070365 . C . . LowGQX END=234070473 GT ./. chr2 234072342 . T . . LowGQX END=234072550 GT ./. chr2 234072952 . G . . LowGQX END=234073071 GT ./. chr2 234077949 . A . . LowGQX END=234078049 GT ./. chr2 234078671 . G . . LowGQX END=234078811 GT ./. chr2 234079141 . G . . LowGQX END=234079251 GT ./. chr2 234079704 . T . . LowGQX END=234079804 GT ./. chr2 234085902 . G . . LowGQX END=234086002 GT ./. chr2 234091051 . T . . LowGQX END=234091151 GT ./. chr2 234093053 . G . . LowGQX END=234093168 GT ./. chr2 234094480 . C . . LowGQX END=234094580 GT ./. chr2 234098490 . C . . LowGQX END=234098590 GT ./. chr2 234102417 . A . . LowGQX END=234102608 GT ./. chr2 234104043 . A . . LowGQX END=234104143 GT ./. chr2 234106740 . G . . LowGQX END=234107023 GT ./. chr2 234112771 . G . . LowGQX END=234113321 GT ./. chr2 234113322 . G . . LowGQX END=234113331;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 234113332 . C . . LowGQX . GT ./. chr2 234113333 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 234113334 . C . . LowGQX . GT ./. chr2 234113335 . C . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 234113336 . A . . LowGQX . GT ./. chr2 234113337 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 234113338 . G . . LowGQX . GT ./. chr2 234113339 . G . . LowGQX END=234113342;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 234113343 . C . . LowGQX . GT ./. chr2 234113344 . T . . LowGQX END=234113346;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 234113347 . G . . LowGQX END=234113348 GT ./. chr2 234113349 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 234113350 . G . . LowGQX . GT ./. chr2 234113351 . G . . LowGQX END=234113357;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 234113358 . A . . LowGQX . GT ./. chr2 234113359 . T . . LowGQX END=234113363;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 234113364 . G . . LowGQX . GT ./. chr2 234115326 . A . . LowGQX END=234115426 GT ./. chr2 234160422 . C . . LowGQX END=234160591 GT ./. chr2 234164745 . T . . LowGQX END=234164845 GT ./. chr2 234171774 . A . . LowGQX END=234171884 GT ./. chr2 234172625 . C . . LowGQX END=234172725 GT ./. chr2 234173536 . A . . LowGQX END=234173792 GT ./. chr2 234178631 . T . . LowGQX END=234178731 GT ./. chr2 234181550 . C . . LowGQX END=234181706 GT ./. chr2 234182346 . C . . LowGQX END=234182446 GT ./. chr2 234182612 . G . . LowGQX END=234182712 GT ./. chr2 234183320 . A . . LowGQX END=234183427 GT ./. chr2 234184372 . A . . LowGQX END=234184650 GT ./. chr2 234186212 . A . . LowGQX END=234186322 GT ./. chr2 234189737 . T . . LowGQX END=234189837 GT ./. chr2 234191314 . C . . LowGQX END=234191414 GT ./. chr2 234197322 . G . . LowGQX END=234197588 GT ./. chr2 234198498 . A . . LowGQX END=234198623 GT ./. chr2 234198892 . A . . LowGQX END=234199002 GT ./. chr2 234200772 . A . . LowGQX END=234200926 GT ./. chr2 234201007 . T . . LowGQX END=234201107 GT ./. chr2 234201900 . A . . LowGQX END=234202006 GT ./. chr2 234202901 . A . . LowGQX END=234203079 GT ./. chr2 234217835 . C . . LowGQX END=234217968 GT ./. chr2 234224661 . T . . LowGQX END=234224821 GT ./. chr2 234227359 . T . . LowGQX END=234227651 GT ./. chr2 234229275 . G . . LowGQX END=234229470 GT ./. chr2 234231552 . C . . LowGQX END=234231711 GT ./. chr2 234235765 . A . . LowGQX END=234235865 GT ./. chr2 234237123 . G . . LowGQX END=234237260 GT ./. chr2 234238091 . A . . LowGQX END=234238251 GT ./. chr2 234240215 . G . . LowGQX END=234240382 GT ./. chr2 234243597 . T . . LowGQX END=234243746 GT ./. chr2 234247281 . T . . LowGQX END=234247400 GT ./. chr2 234247433 . T . . LowGQX END=234247533 GT ./. chr2 234249023 . G . . LowGQX END=234249183 GT ./. chr2 234250855 . T . . LowGQX END=234251025 GT ./. chr2 234252230 . T . . LowGQX END=234252330 GT ./. chr2 234254964 . C . . LowGQX END=234255124 GT ./. chr2 234255400 . G . . LowGQX END=234255559 GT ./. chr2 234263142 . G . . LowGQX END=234263323 GT ./. chr2 234294574 . A . . LowGQX END=234294674 GT ./. chr2 234296878 . T . . LowGQX END=234297016 GT ./. chr2 234299040 . T . . LowGQX END=234299140 GT ./. chr2 234343024 . A . . LowGQX END=234343184 GT ./. chr2 234343413 . A . . LowGQX END=234343550 GT ./. chr2 234344412 . A . . LowGQX END=234344573 GT ./. chr2 234344960 . A . . LowGQX END=234345090 GT ./. chr2 234346021 . A . . LowGQX END=234346128 GT ./. chr2 234346861 . A . . LowGQX END=234347028 GT ./. chr2 234350531 . A . . LowGQX END=234350864 GT ./. chr2 234354267 . A . . LowGQX END=234354411 GT ./. chr2 234355351 . T . . LowGQX END=234355451 GT ./. chr2 234356731 . A . . LowGQX END=234356831 GT ./. chr2 234356920 . A . . LowGQX END=234357024 GT ./. chr2 234357747 . A . . LowGQX END=234358025 GT ./. chr2 234358626 . A . . LowGQX END=234358780 GT ./. chr2 234359566 . A . . LowGQX END=234359699 GT ./. chr2 234360608 . A . . LowGQX END=234360709 GT ./. chr2 234363003 . A . . LowGQX END=234363109 GT ./. chr2 234363407 . A . . LowGQX END=234363522 GT ./. chr2 234365543 . A . . LowGQX END=234365644 GT ./. chr2 234365865 . A . . LowGQX END=234366275 GT ./. chr2 234366928 . A . . LowGQX END=234367046 GT ./. chr2 234368401 . A . . LowGQX END=234368540 GT ./. chr2 234368838 . A . . LowGQX END=234368994 GT ./. chr2 234370992 . A . . LowGQX END=234371108 GT ./. chr2 234371286 . T . . LowGQX END=234371437 GT ./. chr2 234372808 . A . . LowGQX END=234372932 GT ./. chr2 234375730 . A . . LowGQX END=234375852 GT ./. chr2 234377067 . A . . LowGQX END=234377202 GT ./. chr2 234378012 . T . . LowGQX END=234378112 GT ./. chr2 234385984 . G . . LowGQX END=234386150 GT ./. chr2 234389846 . T . . LowGQX END=234389946 GT ./. chr2 234394175 . A . . LowGQX END=234394275 GT ./. chr2 234394342 . G . . LowGQX END=234394692 GT ./. chr2 234396595 . A . . LowGQX END=234396695 GT ./. chr2 234396868 . A . . LowGQX END=234396968 GT ./. chr2 234397960 . C . . LowGQX END=234398130 GT ./. chr2 234399648 . C . . LowGQX END=234399748 GT ./. chr2 234399810 . G . . LowGQX END=234399910 GT ./. chr2 234402020 . T . . LowGQX END=234402198 GT ./. chr2 234405391 . A . . LowGQX END=234405491 GT ./. chr2 234407176 . G . . LowGQX END=234407276 GT ./. chr2 234408493 . T . . LowGQX END=234408593 GT ./. chr2 234418624 . G . . LowGQX END=234418788 GT ./. chr2 234420349 . T . . LowGQX END=234420449 GT ./. chr2 234421192 . T . . LowGQX END=234421292 GT ./. chr2 234428171 . A . . LowGQX END=234428325 GT ./. chr2 234429636 . C . . LowGQX END=234429761 GT ./. chr2 234431815 . C . . LowGQX END=234432136 GT ./. chr2 234433123 . A . . LowGQX END=234433223 GT ./. chr2 234434116 . T . . LowGQX END=234434216 GT ./. chr2 234436052 . C . . LowGQX END=234436225 GT ./. chr2 234438068 . T . . LowGQX END=234438168 GT ./. chr2 234442124 . C . . LowGQX END=234442426 GT ./. chr2 234449307 . C . . LowGQX END=234449416 GT ./. chr2 234450912 . A . . LowGQX END=234451012 GT ./. chr2 234457696 . G . . LowGQX END=234457876 GT ./. chr2 234460021 . C . . LowGQX END=234460166 GT ./. chr2 234463025 . C . . LowGQX END=234463173 GT ./. chr2 234465500 . C . . LowGQX END=234465666 GT ./. chr2 234468456 . C . . LowGQX END=234468571 GT ./. chr2 234469615 . T . . LowGQX END=234469715 GT ./. chr2 234469787 . T . . LowGQX END=234469887 GT ./. chr2 234471366 . A . . LowGQX END=234471466 GT ./. chr2 234474001 . C . . LowGQX END=234474237 GT ./. chr2 234526352 . T . . LowGQX END=234527211 GT ./. chr2 234545167 . T . . LowGQX END=234546026 GT ./. chr2 234580579 . T . . LowGQX END=234581438 GT ./. chr2 234590582 . T . . LowGQX END=234591441 GT ./. chr2 234598498 . G . . LowGQX END=234598598 GT ./. chr2 234599136 . T . . LowGQX END=234599236 GT ./. chr2 234601638 . A . . LowGQX END=234602518 GT ./. chr2 234621636 . A . . LowGQX END=234622507 GT ./. chr2 234626435 . G . . LowGQX END=234626535 GT ./. chr2 234627416 . T . . LowGQX END=234628385 GT ./. chr2 234637771 . A . . LowGQX END=234638642 GT ./. chr2 234652124 . T . . LowGQX END=234652563 GT ./. chr2 234663241 . T . . LowGQX END=234663714 GT ./. chr2 234668883 . T . . LowGQX END=234669849 GT ./. chr2 234675629 . C . . LowGQX END=234675863 GT ./. chr2 234676444 . C . . LowGQX END=234676634 GT ./. chr2 234676815 . T . . LowGQX END=234677137 GT ./. chr2 234678142 . T . . LowGQX END=234678242 GT ./. chr2 234680857 . T . . LowGQX END=234681257 GT ./. chr2 234688002 . G . . LowGQX END=234688102 GT ./. chr2 234688316 . G . . LowGQX END=234688499 GT ./. chr2 234698142 . G . . LowGQX END=234698275 GT ./. chr2 234698497 . G . . LowGQX END=234698661 GT ./. chr2 234701441 . G . . LowGQX END=234701541 GT ./. chr2 234702318 . G . . LowGQX END=234702471 GT ./. chr2 234703008 . G . . LowGQX END=234703153 GT ./. chr2 234704295 . G . . LowGQX END=234704395 GT ./. chr2 234704602 . T . . LowGQX END=234704702 GT ./. chr2 234704845 . G . . LowGQX END=234704960 GT ./. chr2 234707408 . T . . LowGQX END=234707508 GT ./. chr2 234708425 . G . . LowGQX END=234708546 GT ./. chr2 234708850 . G . . LowGQX END=234708962 GT ./. chr2 234710813 . G . . LowGQX END=234710962 GT ./. chr2 234712064 . C . . LowGQX END=234712164 GT ./. chr2 234712696 . G . . LowGQX END=234712839 GT ./. chr2 234713117 . G . . LowGQX END=234713217 GT ./. chr2 234713649 . G . . LowGQX END=234713758 GT ./. chr2 234716068 . G . . LowGQX END=234716189 GT ./. chr2 234716378 . G . . LowGQX END=234716502 GT ./. chr2 234717771 . G . . LowGQX END=234717925 GT ./. chr2 234719439 . G . . LowGQX END=234719563 GT ./. chr2 234720516 . T . . LowGQX END=234720616 GT ./. chr2 234722315 . G . . LowGQX END=234722425 GT ./. chr2 234723226 . A . . LowGQX END=234723326 GT ./. chr2 234725426 . G . . LowGQX END=234725532 GT ./. chr2 234726647 . G . . LowGQX END=234726772 GT ./. chr2 234727247 . G . . LowGQX END=234727417 GT ./. chr2 234727962 . G . . LowGQX END=234728116 GT ./. chr2 234728547 . G . . LowGQX END=234728703 GT ./. chr2 234730769 . G . . LowGQX END=234730930 GT ./. chr2 234731008 . G . . LowGQX END=234731203 GT ./. chr2 234731526 . G . . LowGQX END=234731665 GT ./. chr2 234732201 . G . . LowGQX END=234732317 GT ./. chr2 234737275 . G . . LowGQX END=234737426 GT ./. chr2 234737515 . G . . LowGQX END=234737719 GT ./. chr2 234738265 . G . . LowGQX END=234738422 GT ./. chr2 234740054 . G . . LowGQX END=234740187 GT ./. chr2 234740822 . G . . LowGQX END=234740926 GT ./. chr2 234741208 . T . . LowGQX END=234741308 GT ./. chr2 234741783 . G . . LowGQX END=234741906 GT ./. chr2 234746151 . A . . LowGQX END=234746311 GT ./. chr2 234749253 . A . . LowGQX END=234750854 GT ./. chr2 234752841 . T . . LowGQX END=234752941 GT ./. chr2 234754371 . T . . LowGQX END=234754471 GT ./. chr2 234756026 . C . . LowGQX END=234756126 GT ./. chr2 234758407 . A . . LowGQX END=234758508 GT ./. chr2 234761189 . A . . LowGQX END=234761289 GT ./. chr2 234762474 . T . . LowGQX END=234762574 GT ./. chr2 234762978 . C . . LowGQX END=234763149 GT ./. chr2 234774771 . T . . LowGQX END=234775842 GT ./. chr2 234835181 . A . . LowGQX END=234835302 GT ./. chr2 234839300 . T . . LowGQX END=234839400 GT ./. chr2 234845955 . A . . LowGQX END=234846156 GT ./. chr2 234847640 . A . . LowGQX END=234847822 GT ./. chr2 234851218 . A . . LowGQX END=234851423 GT ./. chr2 234854498 . A . . LowGQX END=234854677 GT ./. chr2 234855716 . T . . LowGQX END=234855816 GT ./. chr2 234855937 . C . . LowGQX END=234856037 GT ./. chr2 234856174 . C . . LowGQX END=234856274 GT ./. chr2 234858591 . A . . LowGQX END=234858793 GT ./. chr2 234862559 . A . . LowGQX END=234862666 GT ./. chr2 234863774 . A . . LowGQX END=234863897 GT ./. chr2 234869418 . A . . LowGQX END=234869713 GT ./. chr2 234871924 . A . . LowGQX END=234872024 GT ./. chr2 234873270 . A . . LowGQX END=234873404 GT ./. chr2 234875221 . C . . LowGQX END=234875402 GT ./. chr2 234878337 . A . . LowGQX END=234878454 GT ./. chr2 234878852 . A . . LowGQX END=234879073 GT ./. chr2 234888770 . A . . LowGQX END=234888928 GT ./. chr2 234890416 . A . . LowGQX END=234890562 GT ./. chr2 234891695 . A . . LowGQX END=234891996 GT ./. chr2 234894330 . A . . LowGQX END=234894512 GT ./. chr2 234904968 . A . . LowGQX END=234905163 GT ./. chr2 234915495 . A . . LowGQX END=234915599 GT ./. chr2 234916622 . T . . LowGQX END=234916781 GT ./. chr2 234923182 . G . . LowGQX END=234923334 GT ./. chr2 234925934 . T . . LowGQX END=234926034 GT ./. chr2 234959424 . T . . LowGQX END=234959524 GT ./. chr2 234959613 . A . . LowGQX END=234959742 GT ./. chr2 234967478 . A . . LowGQX END=234967605 GT ./. chr2 234968960 . T . . LowGQX END=234969171 GT ./. chr2 234975085 . C . . LowGQX END=234975255 GT ./. chr2 234975786 . A . . LowGQX END=234975944 GT ./. chr2 234978565 . T . . LowGQX END=234978665 GT ./. chr2 235404415 . G . . LowGQX END=235404515 GT ./. chr2 235404650 . C . . LowGQX END=235405233 GT ./. chr2 235943645 . A . . LowGQX END=235943825 GT ./. chr2 235949530 . A . . LowGQX END=235951894 GT ./. chr2 235961204 . A . . LowGQX END=235961397 GT ./. chr2 235962234 . A . . LowGQX END=235962463 GT ./. chr2 236403299 . G . . LowGQX END=236403519 GT ./. chr2 236433132 . C . . LowGQX END=236433232 GT ./. chr2 236578743 . C . . LowGQX END=236579702 GT ./. chr2 236617803 . T . . LowGQX END=236617903 GT ./. chr2 236626195 . T . . LowGQX END=236626349 GT ./. chr2 236649600 . G . . LowGQX END=236649700 GT ./. chr2 236653340 . A . . LowGQX END=236653486 GT ./. chr2 236658996 . A . . LowGQX END=236659135 GT ./. chr2 236682551 . T . . LowGQX END=236682651 GT ./. chr2 236682946 . C . . LowGQX END=236683067 GT ./. chr2 236685534 . A . . LowGQX END=236685694 GT ./. chr2 236691945 . A . . LowGQX END=236692045 GT ./. chr2 236706401 . A . . LowGQX END=236706533 GT ./. chr2 236708009 . A . . LowGQX END=236708169 GT ./. chr2 236715821 . G . . LowGQX END=236715980 GT ./. chr2 236761329 . G . . LowGQX END=236761498 GT ./. chr2 236791937 . T . . LowGQX END=236792096 GT ./. chr2 236817380 . A . . LowGQX END=236817553 GT ./. chr2 236839407 . A . . LowGQX END=236839570 GT ./. chr2 236877104 . A . . LowGQX END=236877294 GT ./. chr2 236923437 . C . . LowGQX END=236923537 GT ./. chr2 236945203 . A . . LowGQX END=236945362 GT ./. chr2 236949391 . C . . LowGQX END=236949491 GT ./. chr2 236954579 . G . . LowGQX END=236954679 GT ./. chr2 236957701 . A . . LowGQX END=236957928 GT ./. chr2 237028834 . A . . LowGQX END=237029094 GT ./. chr2 237032561 . A . . LowGQX END=237032769 GT ./. chr2 237074555 . C . . LowGQX END=237075083 GT ./. chr2 237075749 . C . . LowGQX END=237075849 GT ./. chr2 237076089 . C . . LowGQX END=237076618 GT ./. chr2 237103514 . T . . LowGQX END=237103701 GT ./. chr2 237104825 . G . . LowGQX END=237105029 GT ./. chr2 237122993 . A . . LowGQX END=237123510 GT ./. chr2 237146320 . C . . LowGQX END=237146600 GT ./. chr2 237149922 . C . . LowGQX END=237150164 GT ./. chr2 237168146 . G . . LowGQX END=237168246 GT ./. chr2 237172783 . C . . LowGQX END=237172989 GT ./. chr2 237185996 . A . . LowGQX END=237186096 GT ./. chr2 237233329 . T . . LowGQX END=237233429 GT ./. chr2 237240001 . C . . LowGQX END=237240241 GT ./. chr2 237246847 . C . . LowGQX END=237247026 GT ./. chr2 237252325 . C . . PASS END=237252353;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:10:24:60 chr2 237252354 . G . . PASS END=237252379;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:8:21:60 chr2 237252380 . A G 213.22 LowGQ DP=8;Dels=0.00;FS=0.000;HRun=1;HaplotypeScore=0.0000;MQ=60;MQ0=0;QD=26.65;SB=-80.53;TI=NM_024726;GI=IQCA1;FC=Silent GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,8:8:18.06:246,18,0:60:18:1.000 chr2 237252381 . G . . PASS END=237252384;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:8:18:60 chr2 237252385 . C . . PASS END=237252386;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:7:12:60 chr2 237252387 . T . . PASS END=237252390;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:6:15:60 chr2 237252391 . C . . PASS END=237252399;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:6:12:60 chr2 237252400 . G . . PASS END=237252423;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:8:18:60 chr2 237252424 . T . . PASS END=237252425;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:7:15:60 chr2 237253193 . T . . PASS END=237253204;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:8:15:60 chr2 237253205 . T . . PASS END=237253218;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:9:21:60 chr2 237253219 . A . . PASS . GT:DP:GQX:MQ 0/0:9:15:60 chr2 237253220 . C . . PASS END=237253246;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:9:21:60 chr2 237253247 . C . . PASS END=237253249;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:11:18:60 chr2 237253250 . C . . PASS END=237253254;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:11:21:60 chr2 237253255 . C . . PASS END=237253256;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:11:18:60 chr2 237253257 . C . . PASS . GT:DP:GQX:MQ 0/0:11:24:60 chr2 237253258 . A . . PASS . GT:DP:GQX:MQ 0/0:11:18:60 chr2 237253259 . C . . PASS END=237253271;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:13:21:60 chr2 237253272 . G . . PASS END=237253277;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:12:24:60 chr2 237253278 . T . . PASS END=237253293;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:13:21:60 chr2 237272422 . C . . LowGQX END=237272623 GT ./. chr2 237276781 . A . . LowGQX END=237276945 GT ./. chr2 237285737 . T . . LowGQX END=237285837 GT ./. chr2 237289186 . C . . LowGQX END=237289286 GT ./. chr2 237300617 . A . . LowGQX END=237300717 GT ./. chr2 237300886 . C . . LowGQX END=237300994 GT ./. chr2 237308044 . T . . LowGQX END=237308144 GT ./. chr2 237327791 . C . . LowGQX END=237327915 GT ./. chr2 237349675 . A . . LowGQX END=237349775 GT ./. chr2 237374147 . C . . LowGQX END=237374354 GT ./. chr2 237395458 . T . . LowGQX END=237395558 GT ./. chr2 237396642 . C . . LowGQX END=237396835 GT ./. chr2 237402410 . C . . LowGQX END=237402531 GT ./. chr2 237405805 . C . . LowGQX END=237406131 GT ./. chr2 237412257 . G . . LowGQX END=237412357 GT ./. chr2 237415855 . T . . LowGQX END=237415955 GT ./. chr2 237489107 . C . . LowGQX END=237490200 GT ./. chr2 237994597 . C . . LowGQX END=237994697 GT ./. chr2 237995756 . T . . LowGQX END=237995856 GT ./. chr2 237996079 . A . . LowGQX END=237996179 GT ./. chr2 237997223 . T . . LowGQX END=237997323 GT ./. chr2 237998503 . A . . LowGQX END=237998640 GT ./. chr2 238002731 . A . . LowGQX END=238002843 GT ./. chr2 238004447 . T . . LowGQX END=238004547 GT ./. chr2 238005383 . T . . LowGQX END=238005539 GT ./. chr2 238006296 . T . . LowGQX END=238006396 GT ./. chr2 238165748 . C . . LowGQX END=238165848 GT ./. chr2 238166072 . G . . LowGQX END=238166178 GT ./. chr2 238233347 . T . . LowGQX END=238233509 GT ./. chr2 238234152 . A . . LowGQX END=238234419 GT ./. chr2 238242042 . G . . LowGQX END=238242243 GT ./. chr2 238243218 . T . . LowGQX END=238243584 GT ./. chr2 238244727 . G . . LowGQX END=238245227 GT ./. chr2 238247607 . T . . LowGQX END=238247812 GT ./. chr2 238249044 . G . . LowGQX END=238249845 GT ./. chr2 238250657 . A . . LowGQX END=238250856 GT ./. chr2 238252918 . G . . LowGQX END=238253908 GT ./. chr2 238255095 . T . . LowGQX END=238255260 GT ./. chr2 238256399 . G . . LowGQX END=238256564 GT ./. chr2 238256941 . C . . LowGQX END=238257079 GT ./. chr2 238257205 . T . . LowGQX END=238257358 GT ./. chr2 238258739 . T . . LowGQX END=238258904 GT ./. chr2 238259722 . T . . LowGQX END=238259887 GT ./. chr2 238261106 . T . . LowGQX END=238261279 GT ./. chr2 238261925 . A . . LowGQX END=238262098 GT ./. chr2 238263491 . G . . LowGQX END=238263655 GT ./. chr2 238265928 . C . . LowGQX END=238266086 GT ./. chr2 238266409 . C . . LowGQX END=238266577 GT ./. chr2 238267113 . A . . LowGQX END=238267278 GT ./. chr2 238267615 . C . . LowGQX END=238267783 GT ./. chr2 238267798 . C . . LowGQX END=238268083 GT ./. chr2 238268680 . C . . LowGQX END=238268854 GT ./. chr2 238269641 . A . . LowGQX END=238269869 GT ./. chr2 238270331 . C . . LowGQX END=238270526 GT ./. chr2 238271845 . A . . LowGQX END=238272093 GT ./. chr2 238272942 . C . . LowGQX END=238273123 GT ./. chr2 238274290 . A . . LowGQX END=238274730 GT ./. chr2 238275279 . G . . LowGQX END=238275981 GT ./. chr2 238277155 . A . . LowGQX END=238277872 GT ./. chr2 238280327 . T . . LowGQX END=238281032 GT ./. chr2 238283004 . G . . LowGQX END=238283715 GT ./. chr2 238285364 . T . . LowGQX END=238286039 GT ./. chr2 238287228 . G . . LowGQX END=238287930 GT ./. chr2 238289507 . G . . LowGQX END=238290194 GT ./. chr2 238296174 . A . . LowGQX END=238296879 GT ./. chr2 238303179 . C . . LowGQX END=238303899 GT ./. chr2 238305319 . T . . LowGQX END=238305512 GT ./. chr2 238330182 . C . . LowGQX END=238330484 GT ./. chr2 238330668 . C . . LowGQX END=238330828 GT ./. chr2 238402019 . A . . LowGQX END=238402231 GT ./. chr2 238419148 . G . . LowGQX END=238419490 GT ./. chr2 238419581 . G . . LowGQX END=238419796 GT ./. chr2 238427084 . G . . LowGQX END=238427343 GT ./. chr2 238428502 . T . . LowGQX END=238428724 GT ./. chr2 238434193 . G . . LowGQX END=238434500 GT ./. chr2 238435946 . T . . LowGQX END=238436211 GT ./. chr2 238443156 . G . . LowGQX END=238443342 GT ./. chr2 238448940 . C . . LowGQX END=238449228 GT ./. chr2 238449394 . A . . LowGQX END=238449652 GT ./. chr2 238451159 . G . . LowGQX END=238451354 GT ./. chr2 238454099 . G . . LowGQX END=238454217 GT ./. chr2 238455198 . C . . LowGQX END=238455378 GT ./. chr2 238457813 . T . . LowGQX END=238457973 GT ./. chr2 238460929 . G . . LowGQX END=238461132 GT ./. chr2 238461702 . G . . LowGQX END=238461802 GT ./. chr2 238462158 . A . . LowGQX END=238462388 GT ./. chr2 238475215 . G . . LowGQX END=238475319 GT ./. chr2 238475623 . C . . LowGQX END=238475821 GT ./. chr2 238483076 . T . . LowGQX END=238483230 GT ./. chr2 238483660 . A . . LowGQX END=238483774 GT ./. chr2 238484027 . C . . LowGQX END=238484127 GT ./. chr2 238485227 . G . . LowGQX END=238485334 GT ./. chr2 238485898 . A . . LowGQX END=238486028 GT ./. chr2 238486645 . A . . LowGQX END=238486801 GT ./. chr2 238494639 . A . . LowGQX END=238494800 GT ./. chr2 238499811 . G . . LowGQX END=238499911 GT ./. chr2 238500514 . G . . LowGQX END=238500675 GT ./. chr2 238503536 . A . . LowGQX END=238503636 GT ./. chr2 238536226 . G . . LowGQX END=238536386 GT ./. chr2 238601082 . G . . LowGQX END=238601099 GT ./. chr2 238601100 . T . . LowGQX END=238601118;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:40 chr2 238601119 . T . . LowGQX END=238601182 GT ./. chr2 238617181 . T . . LowGQX END=238617281 GT ./. chr2 238617367 . T . . LowGQX END=238617467 GT ./. chr2 238622861 . T . . LowGQX END=238622961 GT ./. chr2 238626378 . C . . LowGQX END=238626478 GT ./. chr2 238628084 . G . . LowGQX END=238628239 GT ./. chr2 238629391 . T . . LowGQX END=238629491 GT ./. chr2 238632160 . T . . LowGQX END=238632260 GT ./. chr2 238636499 . T . . LowGQX END=238636599 GT ./. chr2 238642389 . A . . LowGQX END=238642489 GT ./. chr2 238643894 . G . . LowGQX END=238643994 GT ./. chr2 238647864 . T . . LowGQX END=238647964 GT ./. chr2 238656915 . G . . LowGQX END=238657075 GT ./. chr2 238657840 . A . . LowGQX END=238658020 GT ./. chr2 238659829 . G . . LowGQX END=238659929 GT ./. chr2 238661930 . A . . LowGQX END=238662125 GT ./. chr2 238664735 . C . . LowGQX END=238664835 GT ./. chr2 238666095 . T . . LowGQX END=238666248 GT ./. chr2 238667368 . T . . LowGQX END=238667468 GT ./. chr2 238668705 . A . . LowGQX END=238668851 GT ./. chr2 238671244 . A . . LowGQX END=238672786 GT ./. chr2 238678561 . A . . LowGQX END=238678661 GT ./. chr2 238680723 . G . . LowGQX END=238680842 GT ./. chr2 238681499 . C . . LowGQX END=238681599 GT ./. chr2 238683000 . G . . LowGQX END=238683106 GT ./. chr2 238688064 . G . . LowGQX END=238688176 GT ./. chr2 238722238 . A . . LowGQX END=238722338 GT ./. chr2 238725635 . G . . LowGQX END=238727240 GT ./. chr2 238727523 . A . . LowGQX END=238727623 GT ./. chr2 238728817 . G . . LowGQX END=238728995 GT ./. chr2 238729713 . G . . LowGQX END=238730050 GT ./. chr2 238730378 . C . . LowGQX END=238730478 GT ./. chr2 238732082 . G . . LowGQX END=238732242 GT ./. chr2 238732933 . G . . LowGQX END=238733063 GT ./. chr2 238735883 . C . . LowGQX END=238735983 GT ./. chr2 238736061 . T . . LowGQX END=238736161 GT ./. chr2 238737859 . G . . LowGQX END=238738146 GT ./. chr2 238742639 . G . . LowGQX END=238742786 GT ./. chr2 238742920 . G . . LowGQX END=238743090 GT ./. chr2 238768235 . G . . LowGQX END=238768395 GT ./. chr2 238785824 . C . . LowGQX END=238786007 GT ./. chr2 238820168 . A . . LowGQX END=238820428 GT ./. chr2 238875642 . G . . LowGQX END=238875802 GT ./. chr2 238881748 . T . . LowGQX END=238881870 GT ./. chr2 238882253 . T . . LowGQX END=238882353 GT ./. chr2 238894767 . A . . LowGQX END=238894867 GT ./. chr2 238896513 . T . . LowGQX END=238896670 GT ./. chr2 238898977 . C . . LowGQX END=238899137 GT ./. chr2 238903369 . T . . LowGQX END=238903469 GT ./. chr2 238911982 . T . . LowGQX END=238912082 GT ./. chr2 238925175 . G . . LowGQX END=238925278 GT ./. chr2 238933969 . T . . LowGQX END=238934069 GT ./. chr2 238939176 . C . . LowGQX END=238939276 GT ./. chr2 238940830 . A . . LowGQX END=238940930 GT ./. chr2 238944501 . A . . LowGQX END=238944601 GT ./. chr2 238949905 . G . . LowGQX END=238950005 GT ./. chr2 238969660 . G . . LowGQX END=238970000 GT ./. chr2 238972996 . A . . LowGQX END=238973113 GT ./. chr2 238976704 . A . . LowGQX END=238976809 GT ./. chr2 238977916 . T . . LowGQX END=238978124 GT ./. chr2 238982346 . C . . LowGQX END=238982506 GT ./. chr2 238990348 . A . . LowGQX END=238990480 GT ./. chr2 238990684 . A . . LowGQX END=238990853 GT ./. chr2 238991634 . G . . LowGQX END=238991823 GT ./. chr2 238991887 . A . . LowGQX END=238991998 GT ./. chr2 238999843 . C . . LowGQX END=238999943 GT ./. chr2 239002494 . G . . LowGQX END=239002594 GT ./. chr2 239003059 . A . . LowGQX END=239003196 GT ./. chr2 239005379 . G . . LowGQX END=239005530 GT ./. chr2 239006811 . C . . LowGQX END=239006999 GT ./. chr2 239007871 . A . . LowGQX END=239007992 GT ./. chr2 239009048 . C . . LowGQX END=239009358 GT ./. chr2 239010570 . G . . LowGQX END=239010775 GT ./. chr2 239013295 . A . . LowGQX END=239013486 GT ./. chr2 239016430 . A . . LowGQX END=239016617 GT ./. chr2 239025542 . A . . LowGQX END=239025678 GT ./. chr2 239033909 . A . . LowGQX END=239034028 GT ./. chr2 239036261 . A . . LowGQX END=239036378 GT ./. chr2 239037346 . A . . LowGQX END=239037548 GT ./. chr2 239038767 . A . . LowGQX END=239040376 GT ./. chr2 239049395 . C . . LowGQX END=239050170 GT ./. chr2 239051408 . T . . LowGQX END=239051619 GT ./. chr2 239053536 . C . . LowGQX END=239053636 GT ./. chr2 239054296 . T . . LowGQX END=239054474 GT ./. chr2 239056474 . G . . LowGQX END=239056664 GT ./. chr2 239057647 . G . . LowGQX END=239057794 GT ./. chr2 239059454 . G . . LowGQX END=239059707 GT ./. chr2 239067637 . A . . LowGQX END=239067847 GT ./. chr2 239070234 . G . . LowGQX END=239070358 GT ./. chr2 239071318 . G . . LowGQX END=239071480 GT ./. chr2 239072366 . G . . LowGQX END=239072646 GT ./. chr2 239072660 . A . . LowGQX END=239072825 GT ./. chr2 239072906 . C . . LowGQX END=239073059 GT ./. chr2 239074230 . C . . LowGQX END=239074330 GT ./. chr2 239075596 . G . . LowGQX END=239075696 GT ./. chr2 239075729 . A . . LowGQX END=239076187 GT ./. chr2 239077012 . G . . LowGQX END=239077126 GT ./. chr2 239079175 . C . . LowGQX END=239079320 GT ./. chr2 239079464 . C . . LowGQX END=239079668 GT ./. chr2 239082173 . A . . LowGQX END=239082297 GT ./. chr2 239090704 . A . . LowGQX END=239090830 GT ./. chr2 239092232 . G . . LowGQX END=239092388 GT ./. chr2 239092658 . T . . LowGQX END=239092758 GT ./. chr2 239093820 . A . . LowGQX END=239093931 GT ./. chr2 239096770 . A . . LowGQX END=239096901 GT ./. chr2 239098492 . A . . LowGQX END=239098616 GT ./. chr2 239102895 . T . . LowGQX END=239102995 GT ./. chr2 239103429 . G . . LowGQX END=239103529 GT ./. chr2 239112058 . G . . LowGQX END=239112218 GT ./. chr2 239133773 . A . . LowGQX END=239134141 GT ./. chr2 239136324 . C . . LowGQX END=239136484 GT ./. chr2 239139801 . T . . LowGQX END=239139901 GT ./. chr2 239140522 . A . . LowGQX END=239140861 GT ./. chr2 239147456 . G . . LowGQX END=239148213 GT ./. chr2 239148280 . G . . LowGQX END=239148549 GT ./. chr2 239149033 . C . . LowGQX END=239149316 GT ./. chr2 239154965 . A . . LowGQX END=239155217 GT ./. chr2 239157607 . G . . LowGQX END=239157905 GT ./. chr2 239159141 . C . . LowGQX END=239159436 GT ./. chr2 239160189 . C . . LowGQX END=239160454 GT ./. chr2 239161502 . G . . LowGQX END=239162395 GT ./. chr2 239164247 . C . . LowGQX END=239164604 GT ./. chr2 239165512 . T . . LowGQX END=239165779 GT ./. chr2 239166866 . C . . LowGQX END=239167337 GT ./. chr2 239168559 . G . . LowGQX END=239168746 GT ./. chr2 239169418 . G . . LowGQX END=239169646 GT ./. chr2 239170302 . G . . LowGQX END=239170530 GT ./. chr2 239170781 . G . . LowGQX END=239171037 GT ./. chr2 239171542 . A . . LowGQX END=239171751 GT ./. chr2 239174102 . A . . LowGQX END=239174283 GT ./. chr2 239176646 . T . . LowGQX END=239176891 GT ./. chr2 239177513 . T . . LowGQX END=239177667 GT ./. chr2 239179902 . G . . LowGQX END=239180206 GT ./. chr2 239181660 . C . . LowGQX END=239181725 GT ./. chr2 239181726 . G . . LowGQX END=239181768;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 239181769 . G . . LowGQX END=239181884 GT ./. chr2 239184333 . A . . LowGQX END=239184590 GT ./. chr2 239185713 . A . . LowGQX END=239185886 GT ./. chr2 239186297 . C . . LowGQX END=239186629 GT ./. chr2 239229272 . G . . LowGQX END=239229455 GT ./. chr2 239233932 . C . . LowGQX END=239234032 GT ./. chr2 239234448 . A . . LowGQX END=239234614 GT ./. chr2 239237325 . A . . LowGQX END=239237473 GT ./. chr2 239237565 . A . . LowGQX END=239237986 GT ./. chr2 239241451 . T . . LowGQX END=239241551 GT ./. chr2 239242596 . T . . LowGQX END=239242696 GT ./. chr2 239247001 . A . . LowGQX END=239247101 GT ./. chr2 239253136 . A . . LowGQX END=239253249 GT ./. chr2 239253299 . T . . LowGQX END=239253399 GT ./. chr2 239256057 . C . . LowGQX END=239256157 GT ./. chr2 239257396 . T . . LowGQX END=239257496 GT ./. chr2 239257958 . G . . LowGQX END=239258058 GT ./. chr2 239261466 . A . . LowGQX END=239261594 GT ./. chr2 239261783 . T . . LowGQX END=239261883 GT ./. chr2 239264583 . T . . LowGQX END=239264734 GT ./. chr2 239306098 . A . . LowGQX END=239306323 GT ./. chr2 239307393 . A . . LowGQX END=239307563 GT ./. chr2 239335627 . G . . LowGQX END=239335787 GT ./. chr2 239342193 . A . . LowGQX END=239342339 GT ./. chr2 239344350 . A . . LowGQX END=239344657 GT ./. chr2 239352981 . A . . LowGQX END=239353371 GT ./. chr2 239355023 . A . . LowGQX END=239355202 GT ./. chr2 239756856 . C . . LowGQX END=239757340 GT ./. chr2 239974723 . C . . LowGQX END=239974884 GT ./. chr2 239975105 . G . . LowGQX END=239975349 GT ./. chr2 239976394 . G . . LowGQX END=239976581 GT ./. chr2 239988367 . C . . LowGQX END=239988678 GT ./. chr2 239990134 . A . . LowGQX END=239990355 GT ./. chr2 240002740 . C . . LowGQX END=240002940 GT ./. chr2 240003747 . G . . LowGQX END=240003969 GT ./. chr2 240005800 . G . . LowGQX END=240005990 GT ./. chr2 240009204 . G . . LowGQX END=240009362 GT ./. chr2 240011631 . G . . LowGQX END=240011864 GT ./. chr2 240016642 . T . . LowGQX END=240016804 GT ./. chr2 240024421 . C . . LowGQX END=240024644 GT ./. chr2 240029695 . C . . LowGQX END=240029931 GT ./. chr2 240033171 . C . . LowGQX END=240033460 GT ./. chr2 240036698 . G . . LowGQX END=240037058 GT ./. chr2 240048101 . C . . LowGQX END=240048433 GT ./. chr2 240055890 . G . . LowGQX END=240056391 GT ./. chr2 240061329 . T . . LowGQX END=240061544 GT ./. chr2 240062572 . A . . LowGQX END=240062672 GT ./. chr2 240066228 . A . . LowGQX END=240066462 GT ./. chr2 240078297 . A . . LowGQX END=240078400;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 240078401 . T . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr2 240078402 . G . . LowGQX END=240078410;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 240078411 . A . . LowGQX END=240078521 GT ./. chr2 240083449 . C . . LowGQX END=240083549 GT ./. chr2 240083801 . C . . LowGQX END=240084054 GT ./. chr2 240085448 . C . . LowGQX END=240085671 GT ./. chr2 240098038 . C . . LowGQX END=240098311 GT ./. chr2 240111478 . G . . LowGQX END=240111825 GT ./. chr2 240112625 . T . . LowGQX END=240112725 GT ./. chr2 240158238 . C . . LowGQX END=240158412 GT ./. chr2 240219815 . G . . LowGQX END=240219915 GT ./. chr2 240274322 . G . . LowGQX END=240274454 GT ./. chr2 240323442 . G . . LowGQX END=240323690 GT ./. chr2 240323739 . G . . LowGQX END=240323941 GT ./. chr2 240500119 . A . . LowGQX END=240500619 GT ./. chr2 240504709 . T . . LowGQX END=240504809 GT ./. chr2 240684553 . A . . LowGQX END=240684653 GT ./. chr2 240701997 . G . . LowGQX END=240702120 GT ./. chr2 240721489 . C . . LowGQX END=240721589 GT ./. chr2 240834636 . T . . LowGQX END=240834736 GT ./. chr2 240900484 . T . . LowGQX END=240900655 GT ./. chr2 240909087 . A . . LowGQX END=240909187 GT ./. chr2 240912903 . T . . LowGQX END=240913079 GT ./. chr2 240921531 . C . . LowGQX END=240921637 GT ./. chr2 240922933 . C . . LowGQX END=240923135 GT ./. chr2 240929440 . G . . LowGQX END=240929651 GT ./. chr2 240944576 . T . . LowGQX END=240944764 GT ./. chr2 240946682 . C . . LowGQX END=240946839 GT ./. chr2 240950983 . C . . LowGQX END=240951165 GT ./. chr2 240954085 . A . . LowGQX END=240954329 GT ./. chr2 240957227 . G . . LowGQX END=240957327 GT ./. chr2 240957890 . A . . LowGQX END=240958108 GT ./. chr2 240960563 . T . . LowGQX END=240960881 GT ./. chr2 240961538 . C . . LowGQX END=240961809 GT ./. chr2 240964589 . C . . LowGQX END=240964770 GT ./. chr2 240968907 . C . . LowGQX END=240969847 GT ./. chr2 240981228 . A . . LowGQX END=240982402 GT ./. chr2 240984492 . C . . LowGQX END=240985492 GT ./. chr2 241065978 . T . . LowGQX END=241066360 GT ./. chr2 241069326 . A . . LowGQX END=241069448 GT ./. chr2 241070438 . G . . LowGQX END=241070538 GT ./. chr2 241073337 . C . . LowGQX END=241073437 GT ./. chr2 241075586 . G . . LowGQX END=241075797 GT ./. chr2 241078585 . A . . LowGQX END=241078774 GT ./. chr2 241079443 . T . . LowGQX END=241079543 GT ./. chr2 241079665 . C . . LowGQX END=241079765 GT ./. chr2 241375304 . G . . LowGQX END=241375504 GT ./. chr2 241389243 . T . . LowGQX END=241389343 GT ./. chr2 241389915 . C . . LowGQX END=241390749 GT ./. chr2 241392217 . C . . LowGQX END=241392517 GT ./. chr2 241394320 . G . . LowGQX END=241394480 GT ./. chr2 241395357 . A . . LowGQX END=241395513 GT ./. chr2 241395997 . A . . LowGQX END=241396097 GT ./. chr2 241396819 . T . . LowGQX END=241396919 GT ./. chr2 241397382 . C . . LowGQX END=241397509 GT ./. chr2 241397510 . A . . LowGQX END=241397535;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 241398445 . A . . LowGQX END=241398608 GT ./. chr2 241401606 . A . . LowGQX END=241402002 GT ./. chr2 241402762 . A . . LowGQX END=241402932 GT ./. chr2 241404031 . A . . LowGQX END=241404166 GT ./. chr2 241404252 . G . . LowGQX END=241404428 GT ./. chr2 241404461 . T . . LowGQX END=241404630 GT ./. chr2 241404888 . A . . LowGQX END=241405068 GT ./. chr2 241405473 . A . . LowGQX END=241405710 GT ./. chr2 241419000 . C . . LowGQX END=241419100 GT ./. chr2 241420352 . A . . LowGQX END=241420517 GT ./. chr2 241421538 . A . . LowGQX END=241421690 GT ./. chr2 241439373 . A . . LowGQX END=241439543 GT ./. chr2 241439867 . A . . LowGQX END=241439985 GT ./. chr2 241446975 . A . . LowGQX END=241447111 GT ./. chr2 241448763 . A . . LowGQX END=241448875 GT ./. chr2 241451245 . C . . LowGQX END=241451456 GT ./. chr2 241452217 . A . . LowGQX END=241452362 GT ./. chr2 241459474 . C . . LowGQX END=241459574 GT ./. chr2 241459777 . A . . LowGQX END=241459953 GT ./. chr2 241463297 . C . . LowGQX END=241463801 GT ./. chr2 241465100 . A . . LowGQX END=241465269 GT ./. chr2 241465644 . A . . LowGQX END=241465865 GT ./. chr2 241468452 . A . . LowGQX END=241468929 GT ./. chr2 241471473 . G . . LowGQX END=241471573 GT ./. chr2 241492229 . C . . LowGQX END=241492477 GT ./. chr2 241494281 . A . . LowGQX END=241494475 GT ./. chr2 241496605 . A . . LowGQX END=241496770 GT ./. chr2 241500089 . T . . LowGQX END=241500499 GT ./. chr2 241500705 . T . . LowGQX END=241500887 GT ./. chr2 241507992 . G . . LowGQX END=241508532 GT ./. chr2 241511839 . G . . LowGQX END=241511981 GT ./. chr2 241512526 . G . . LowGQX END=241512681 GT ./. chr2 241513190 . A . . LowGQX END=241513311 GT ./. chr2 241513528 . A . . LowGQX END=241513768 GT ./. chr2 241513930 . A . . LowGQX END=241514048 GT ./. chr2 241514445 . A . . LowGQX END=241514562 GT ./. chr2 241514917 . A . . LowGQX END=241515030 GT ./. chr2 241515950 . A . . LowGQX END=241516185 GT ./. chr2 241516263 . A . . LowGQX END=241516410 GT ./. chr2 241517014 . A . . LowGQX END=241517312 GT ./. chr2 241526287 . C . . LowGQX END=241526472 GT ./. chr2 241528718 . C . . LowGQX END=241528894 GT ./. chr2 241530230 . A . . LowGQX END=241530431 GT ./. chr2 241531348 . A . . LowGQX END=241531570 GT ./. chr2 241531855 . G . . LowGQX END=241531955 GT ./. chr2 241533321 . A . . LowGQX END=241533375 GT ./. chr2 241533376 . C . . LowGQX END=241533450;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 241533451 . C . . LowGQX . GT ./. chr2 241533452 . T . . LowGQX END=241533456;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 241533457 . A . . LowGQX END=241533459 GT ./. chr2 241533460 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 241533461 . A . . LowGQX END=241533462 GT ./. chr2 241533463 . G . . LowGQX END=241533465;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 241533466 . T . . LowGQX . GT ./. chr2 241533467 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 241533958 . A . . LowGQX END=241534097;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 241534098 . G . . LowGQX END=241534101 GT ./. chr2 241534102 . G . . LowGQX END=241534106;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 241534107 . C . . LowGQX END=241534129 GT ./. chr2 241534439 . A . . LowGQX END=241534534 GT ./. chr2 241534535 . C . . LowGQX END=241534579;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 241534580 . T . . LowGQX END=241534794 GT ./. chr2 241535329 . T . . LowGQX END=241535429 GT ./. chr2 241535734 . A . . LowGQX END=241535941 GT ./. chr2 241536096 . A . . LowGQX END=241536368 GT ./. chr2 241537303 . A . . LowGQX END=241537507 GT ./. chr2 241537742 . G . . LowGQX END=241537842 GT ./. chr2 241538033 . C . . LowGQX END=241538133 GT ./. chr2 241555803 . A . . LowGQX END=241555931 GT ./. chr2 241556355 . A . . LowGQX END=241556455 GT ./. chr2 241558354 . G . . LowGQX END=241558454 GT ./. chr2 241569365 . G . . LowGQX END=241570302 GT ./. chr2 241615950 . G . . LowGQX END=241616170 GT ./. chr2 241619717 . T . . LowGQX END=241619928 GT ./. chr2 241621647 . C . . LowGQX END=241622255 GT ./. chr2 241627180 . G . . LowGQX END=241627280 GT ./. chr2 241627831 . A . . LowGQX END=241627931 GT ./. chr2 241628018 . G . . LowGQX END=241628139 GT ./. chr2 241631262 . G . . LowGQX END=241631941 GT ./. chr2 241633807 . C . . LowGQX END=241633969 GT ./. chr2 241634525 . G . . LowGQX END=241634835 GT ./. chr2 241637501 . T . . LowGQX END=241637841 GT ./. chr2 241656752 . C . . LowGQX END=241656754;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:6:60 chr2 241656755 . G . . LowGQX END=241656799;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 241656800 . G . 33.01 LowGQX DP=2;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:1:2:3.01:60:3 chr2 241656801 . A . . LowGQX END=241656807;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr2 241656808 . T . . LowGQX END=241656813;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:4:9:60 chr2 241656814 . G . 36.01 LowGQX DP=4;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:3:4:6.02:60:6 chr2 241656815 . A . . LowGQX END=241656852;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:3:6:60 chr2 241657416 . G . . LowGQX END=241657633 GT ./. chr2 241658422 . C . . LowGQX END=241658616 GT ./. chr2 241659190 . C . . LowGQX END=241659349 GT ./. chr2 241660330 . C . . LowGQX END=241660489 GT ./. chr2 241661173 . A . . LowGQX END=241661333 GT ./. chr2 241661842 . T . . LowGQX END=241662074 GT ./. chr2 241662829 . C . . LowGQX END=241662976 GT ./. chr2 241663333 . A . . LowGQX END=241663493 GT ./. chr2 241664647 . C . . LowGQX END=241664822 GT ./. chr2 241666230 . A . . LowGQX END=241666358 GT ./. chr2 241667768 . C . . LowGQX END=241667868 GT ./. chr2 241674100 . T . . LowGQX END=241674200 GT ./. chr2 241676479 . C . . LowGQX END=241676593 GT ./. chr2 241679467 . G . . LowGQX END=241679567 GT ./. chr2 241679714 . C . . LowGQX END=241679818 GT ./. chr2 241680670 . C . . LowGQX END=241680795 GT ./. chr2 241682284 . A . . LowGQX END=241682402 GT ./. chr2 241683358 . C . . LowGQX END=241683478 GT ./. chr2 241684759 . A . . LowGQX END=241684935 GT ./. chr2 241685144 . C . . LowGQX END=241685327 GT ./. chr2 241685455 . C . . LowGQX END=241685615 GT ./. chr2 241686636 . G . . LowGQX END=241686739 GT ./. chr2 241688059 . T . . LowGQX END=241688159 GT ./. chr2 241689845 . C . . LowGQX END=241689965 GT ./. chr2 241696724 . G . . LowGQX END=241697014 GT ./. chr2 241697776 . C . . LowGQX END=241697915 GT ./. chr2 241700071 . T . . LowGQX END=241700311 GT ./. chr2 241700645 . C . . LowGQX END=241700795 GT ./. chr2 241702135 . C . . LowGQX END=241702253 GT ./. chr2 241702382 . G . . LowGQX END=241702764 GT ./. chr2 241705079 . C . . LowGQX END=241705239 GT ./. chr2 241706315 . C . . LowGQX END=241706439 GT ./. chr2 241706673 . C . . LowGQX END=241706773 GT ./. chr2 241708498 . A . . LowGQX END=241708626 GT ./. chr2 241709043 . C . . LowGQX END=241709154 GT ./. chr2 241710377 . G . . LowGQX END=241710676 GT ./. chr2 241711940 . C . . LowGQX END=241712040 GT ./. chr2 241712530 . C . . LowGQX END=241712674 GT ./. chr2 241713599 . C . . LowGQX END=241713709 GT ./. chr2 241715267 . C . . LowGQX END=241715376 GT ./. chr2 241721976 . A . . LowGQX END=241722076 GT ./. chr2 241722402 . G . . LowGQX END=241722564 GT ./. chr2 241723155 . C . . LowGQX END=241723265 GT ./. chr2 241724355 . G . . LowGQX END=241724518 GT ./. chr2 241725741 . C . . LowGQX END=241725931 GT ./. chr2 241726667 . C . . LowGQX END=241726771 GT ./. chr2 241727467 . C . . LowGQX END=241727657 GT ./. chr2 241728641 . G . . LowGQX END=241728741 GT ./. chr2 241737037 . C . . LowGQX END=241737170 GT ./. chr2 241808232 . G . . LowGQX END=241808499 GT ./. chr2 241808536 . C . . LowGQX END=241808831 GT ./. chr2 241810010 . G . . LowGQX END=241810177 GT ./. chr2 241810715 . T . . LowGQX END=241810918 GT ./. chr2 241812345 . G . . LowGQX END=241812525 GT ./. chr2 241813344 . G . . LowGQX END=241813531 GT ./. chr2 241814475 . C . . LowGQX END=241814673 GT ./. chr2 241815301 . T . . LowGQX END=241815473 GT ./. chr2 241816474 . A . . LowGQX END=241817101 GT ./. chr2 241817388 . A . . LowGQX END=241817619 GT ./. chr2 241818080 . C . . LowGQX END=241818290 GT ./. chr2 241826484 . A . . LowGQX END=241826584 GT ./. chr2 241827707 . A . . LowGQX END=241828068 GT ./. chr2 241829420 . A . . LowGQX END=241829578 GT ./. chr2 241830953 . A . . LowGQX END=241831183 GT ./. chr2 241831274 . C . . LowGQX END=241831374 GT ./. chr2 241834899 . A . . LowGQX END=241835417 GT ./. chr2 241858198 . C . . LowGQX END=241858351 GT ./. chr2 241859379 . G . . LowGQX END=241859552 GT ./. chr2 241861905 . C . . LowGQX END=241862063 GT ./. chr2 241865140 . G . . LowGQX END=241865298 GT ./. chr2 241869058 . C . . LowGQX END=241869158 GT ./. chr2 241869525 . C . . LowGQX END=241869687 GT ./. chr2 241870347 . G . . LowGQX END=241870546 GT ./. chr2 241871734 . G . . LowGQX END=241871913 GT ./. chr2 241872047 . T . . LowGQX END=241872387 GT ./. chr2 241872512 . G . . LowGQX END=241872760 GT ./. chr2 241873086 . G . . LowGQX END=241873270 GT ./. chr2 241873747 . G . . LowGQX END=241873893 GT ./. chr2 241874301 . G . . LowGQX END=241874480 GT ./. chr2 241874703 . C . . LowGQX END=241875073 GT ./. chr2 241885476 . G . . LowGQX END=241885671 GT ./. chr2 241888354 . A . . LowGQX END=241888515 GT ./. chr2 241888949 . G . . LowGQX END=241889120 GT ./. chr2 241889750 . G . . LowGQX END=241889928 GT ./. chr2 241895275 . G . . LowGQX END=241895390 GT ./. chr2 241898717 . G . . LowGQX END=241898862 GT ./. chr2 241902972 . G . . LowGQX END=241903191 GT ./. chr2 241903852 . C . . LowGQX END=241904043 GT ./. chr2 241904798 . G . . LowGQX END=241904936 GT ./. chr2 241905032 . A . . LowGQX END=241905220 GT ./. chr2 241906816 . T . . LowGQX END=241906916 GT ./. chr2 241907546 . G . . LowGQX END=241907680 GT ./. chr2 241922297 . G . . LowGQX END=241922447 GT ./. chr2 241922778 . C . . LowGQX END=241923108 GT ./. chr2 241925304 . C . . LowGQX END=241925404 GT ./. chr2 241928156 . A . . LowGQX END=241928288 GT ./. chr2 241929071 . G . . LowGQX END=241929251 GT ./. chr2 241930605 . G . . LowGQX END=241930705 GT ./. chr2 241932440 . C . . LowGQX END=241932540 GT ./. chr2 241938183 . C . . LowGQX END=241938533 GT ./. chr2 241969700 . G . . LowGQX END=241969989 GT ./. chr2 241973151 . G . . LowGQX END=241973293 GT ./. chr2 241973984 . G . . LowGQX END=241974148 GT ./. chr2 241976206 . G . . LowGQX END=241976333 GT ./. chr2 241976637 . C . . LowGQX END=241976771 GT ./. chr2 241979491 . G . . LowGQX END=241979606 GT ./. chr2 241979716 . G . . LowGQX END=241979831 GT ./. chr2 241980199 . C . . LowGQX END=241980359 GT ./. chr2 241987731 . G . . LowGQX END=241987858 GT ./. chr2 241988078 . G . . LowGQX END=241988109;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 241988110 . A . . LowGQX . GT ./. chr2 241988111 . G . . LowGQX END=241988115;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 241988116 . A . . LowGQX . GT ./. chr2 241988117 . T . . LowGQX END=241988122;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 241988123 . G . . LowGQX . GT ./. chr2 241988124 . G . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr2 241988125 . C . . LowGQX END=241988126 GT ./. chr2 241988127 . C . . LowGQX END=241988139;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 241988140 . C . . LowGQX . GT ./. chr2 241988141 . T . . LowGQX END=241988153;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 241988154 . T . . LowGQX . GT ./. chr2 241988155 . G . . LowGQX END=241988164;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 241988165 . G . . LowGQX . GT ./. chr2 241988166 . G . . LowGQX END=241988184;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr2 241988438 . G . . LowGQX END=241988553 GT ./. chr2 241989233 . G . . LowGQX END=241989459 GT ./. chr2 241991160 . G . . LowGQX END=241991278 GT ./. chr2 241991457 . G . . LowGQX END=241991575 GT ./. chr2 241991771 . G . . LowGQX END=241991937 GT ./. chr2 241992549 . A . . LowGQX END=241992744 GT ./. chr2 242002136 . A . . LowGQX END=242002322 GT ./. chr2 242002928 . A . . LowGQX END=242003118 GT ./. chr2 242003376 . C . . LowGQX END=242003543 GT ./. chr2 242004199 . G . . LowGQX END=242004418 GT ./. chr2 242004703 . C . . LowGQX END=242005013 GT ./. chr2 242007178 . G . . LowGQX END=242007363 GT ./. chr2 242008325 . G . . LowGQX END=242008439 GT ./. chr2 242009334 . G . . LowGQX END=242009617 GT ./. chr2 242010921 . A . . LowGQX END=242011136 GT ./. chr2 242011210 . G . . LowGQX END=242011626 GT ./. chr2 242012680 . G . . LowGQX END=242012839 GT ./. chr2 242021091 . G . . LowGQX END=242021209 GT ./. chr2 242021686 . T . . LowGQX END=242021786 GT ./. chr2 242026799 . G . . LowGQX END=242026899 GT ./. chr2 242027748 . T . . LowGQX END=242027848 GT ./. chr2 242028722 . G . . LowGQX END=242028822 GT ./. chr2 242029377 . A . . LowGQX END=242029477 GT ./. chr2 242029693 . A . . LowGQX END=242029865 GT ./. chr2 242033692 . C . . LowGQX END=242033848 GT ./. chr2 242035411 . A . . LowGQX END=242035856 GT ./. chr2 242035981 . C . . LowGQX END=242036136 GT ./. chr2 242036603 . A . . LowGQX END=242036845 GT ./. chr2 242038809 . A . . LowGQX END=242039418 GT ./. chr2 242040498 . T . . LowGQX END=242040658 GT ./. chr2 242041569 . C . . LowGQX END=242041729 GT ./. chr2 242045930 . A . . LowGQX END=242046190 GT ./. chr2 242046717 . C . . LowGQX END=242046966 GT ./. chr2 242047531 . C . . LowGQX END=242047767 GT ./. chr2 242051604 . G . . LowGQX END=242051906 GT ./. chr2 242054358 . C . . LowGQX END=242054644 GT ./. chr2 242054652 . A . . LowGQX END=242054880 GT ./. chr2 242062096 . G . . LowGQX END=242062366 GT ./. chr2 242063313 . G . . LowGQX END=242063600 GT ./. chr2 242065560 . G . . LowGQX END=242066918 GT ./. chr2 242072238 . C . . LowGQX END=242072497 GT ./. chr2 242075235 . G . . LowGQX END=242075506 GT ./. chr2 242076368 . A . . LowGQX END=242076731 GT ./. chr2 242077317 . A . . LowGQX END=242077554 GT ./. chr2 242078018 . A . . LowGQX END=242078261 GT ./. chr2 242078939 . A . . LowGQX END=242079039 GT ./. chr2 242079249 . C . . LowGQX END=242079522 GT ./. chr2 242079885 . C . . LowGQX END=242080220 GT ./. chr2 242082201 . C . . LowGQX END=242082499 GT ./. chr2 242089072 . C . . LowGQX END=242089172 GT ./. chr2 242089887 . C . . LowGQX END=242090039 GT ./. chr2 242090879 . T . . LowGQX END=242090979 GT ./. chr2 242092889 . A . . LowGQX END=242093022 GT ./. chr2 242097200 . T . . LowGQX END=242097300 GT ./. chr2 242097874 . A . . LowGQX END=242097974 GT ./. chr2 242098626 . A . . LowGQX END=242098761 GT ./. chr2 242099745 . A . . LowGQX END=242099912 GT ./. chr2 242102698 . A . . LowGQX END=242102819 GT ./. chr2 242105750 . A . . LowGQX END=242105859 GT ./. chr2 242106422 . T . . LowGQX END=242106522 GT ./. chr2 242109190 . T . . LowGQX END=242109290 GT ./. chr2 242122060 . A . . LowGQX END=242122241 GT ./. chr2 242122785 . G . . LowGQX END=242122885 GT ./. chr2 242128025 . G . . LowGQX END=242128184 GT ./. chr2 242129470 . A . . LowGQX END=242129589 GT ./. chr2 242130588 . T . . LowGQX END=242130688 GT ./. chr2 242135116 . A . . LowGQX END=242135333 GT ./. chr2 242138729 . A . . LowGQX END=242138841 GT ./. chr2 242139462 . C . . LowGQX END=242139643 GT ./. chr2 242140692 . G . . LowGQX END=242140792 GT ./. chr2 242141607 . A . . LowGQX END=242141722 GT ./. chr2 242142746 . A . . LowGQX END=242142916 GT ./. chr2 242144276 . A . . LowGQX END=242144376 GT ./. chr2 242146987 . A . . LowGQX END=242147088 GT ./. chr2 242148698 . A . . LowGQX END=242148846 GT ./. chr2 242148911 . A . . LowGQX END=242149053 GT ./. chr2 242149708 . A . . LowGQX END=242149811 GT ./. chr2 242149881 . A . . LowGQX END=242149988 GT ./. chr2 242151507 . A . . LowGQX END=242151623 GT ./. chr2 242151905 . C . . LowGQX END=242152065 GT ./. chr2 242154218 . A . . LowGQX END=242154320 GT ./. chr2 242155506 . A . . LowGQX END=242155656 GT ./. chr2 242157030 . C . . LowGQX END=242157309 GT ./. chr2 242157621 . G . . LowGQX END=242157799 GT ./. chr2 242162599 . A . . LowGQX END=242162773 GT ./. chr2 242163075 . A . . LowGQX END=242163199 GT ./. chr2 242163296 . C . . LowGQX END=242163396 GT ./. chr2 242163491 . T . . LowGQX END=242163591 GT ./. chr2 242169010 . T . . LowGQX END=242169110 GT ./. chr2 242169175 . A . . LowGQX END=242169379 GT ./. chr2 242169516 . G . . LowGQX END=242169687 GT ./. chr2 242170172 . A . . LowGQX END=242170362 GT ./. chr2 242173233 . A . . LowGQX END=242173381 GT ./. chr2 242174534 . A . . LowGQX END=242174673 GT ./. chr2 242174903 . A . . LowGQX END=242175012 GT ./. chr2 242176028 . A . . LowGQX END=242176187 GT ./. chr2 242178062 . A . . LowGQX END=242178205 GT ./. chr2 242179015 . A . . LowGQX END=242179238 GT ./. chr2 242179314 . A . . LowGQX END=242179580 GT ./. chr2 242181873 . A . . LowGQX END=242182096 GT ./. chr2 242186165 . A . . LowGQX END=242186301 GT ./. chr2 242186465 . T . . LowGQX END=242186565 GT ./. chr2 242187416 . A . . LowGQX END=242187534 GT ./. chr2 242187657 . A . . LowGQX END=242187766 GT ./. chr2 242188743 . G . . LowGQX END=242188843 GT ./. chr2 242189254 . A . . LowGQX END=242189398 GT ./. chr2 242192362 . C . . LowGQX END=242192462 GT ./. chr2 242192772 . T . . LowGQX END=242192915 GT ./. chr2 242194464 . A . . LowGQX END=242194576 GT ./. chr2 242194787 . A . . LowGQX END=242194998 GT ./. chr2 242195597 . A . . LowGQX END=242195817 GT ./. chr2 242196013 . A . . LowGQX END=242196224 GT ./. chr2 242202124 . A . . LowGQX END=242202344 GT ./. chr2 242203861 . A . . LowGQX END=242204023 GT ./. chr2 242206207 . A . . LowGQX END=242206322 GT ./. chr2 242206978 . T . . LowGQX END=242207078 GT ./. chr2 242255877 . G . . LowGQX END=242255977 GT ./. chr2 242259632 . T . . LowGQX END=242259732 GT ./. chr2 242263595 . G . . LowGQX END=242263695 GT ./. chr2 242263824 . A . . LowGQX END=242264037 GT ./. chr2 242265406 . A . . LowGQX END=242265531 GT ./. chr2 242274535 . T . . LowGQX END=242274635 GT ./. chr2 242274702 . T . . LowGQX END=242274802 GT ./. chr2 242275258 . A . . LowGQX END=242275573 GT ./. chr2 242276795 . A . . LowGQX END=242276934 GT ./. chr2 242277086 . A . . LowGQX END=242277208 GT ./. chr2 242282405 . A . . LowGQX END=242282511 GT ./. chr2 242283165 . A . . LowGQX END=242283315 GT ./. chr2 242285573 . T . . LowGQX END=242285673 GT ./. chr2 242287528 . C . . LowGQX END=242287628 GT ./. chr2 242289425 . C . . LowGQX END=242289592 GT ./. chr2 242312521 . G . . LowGQX END=242312708 GT ./. chr2 242343241 . A . . LowGQX END=242343350 GT ./. chr2 242344186 . T . . LowGQX END=242344286 GT ./. chr2 242346942 . T . . LowGQX END=242347042 GT ./. chr2 242350446 . A . . LowGQX END=242350548 GT ./. chr2 242352720 . A . . LowGQX END=242352839 GT ./. chr2 242357375 . A . . LowGQX END=242357527 GT ./. chr2 242371032 . T . . LowGQX END=242371192 GT ./. chr2 242373571 . A . . LowGQX END=242373739 GT ./. chr2 242374305 . T . . LowGQX END=242374462 GT ./. chr2 242375875 . A . . LowGQX END=242375975 GT ./. chr2 242380717 . A . . LowGQX END=242381168 GT ./. chr2 242381595 . A . . LowGQX END=242381949 GT ./. chr2 242396140 . C . . LowGQX END=242396340 GT ./. chr2 242401933 . T . . LowGQX END=242402033 GT ./. chr2 242402748 . A . . LowGQX END=242402886 GT ./. chr2 242403305 . T . . LowGQX END=242403405 GT ./. chr2 242404850 . C . . LowGQX END=242404950 GT ./. chr2 242405051 . T . . LowGQX END=242405151 GT ./. chr2 242407553 . A . . LowGQX END=242407795 GT ./. chr2 242415270 . A . . LowGQX END=242415405 GT ./. chr2 242422865 . G . . LowGQX END=242422965 GT ./. chr2 242423652 . C . . LowGQX END=242423752 GT ./. chr2 242429369 . A . . LowGQX END=242429469 GT ./. chr2 242430474 . A . . LowGQX END=242430597 GT ./. chr2 242430899 . T . . LowGQX END=242431097 GT ./. chr2 242432342 . A . . LowGQX END=242432454 GT ./. chr2 242432706 . A . . LowGQX END=242432862 GT ./. chr2 242433380 . G . . LowGQX END=242433591 GT ./. chr2 242435047 . T . . LowGQX END=242435147 GT ./. chr2 242435811 . A . . LowGQX END=242435962 GT ./. chr2 242437017 . A . . LowGQX END=242437117 GT ./. chr2 242437598 . A . . LowGQX END=242437767 GT ./. chr2 242438052 . A . . LowGQX END=242438202 GT ./. chr2 242438221 . C . . LowGQX END=242438592 GT ./. chr2 242438640 . G . . LowGQX END=242438832 GT ./. chr2 242439388 . T . . LowGQX END=242439699 GT ./. chr2 242440083 . G . . LowGQX END=242440234 GT ./. chr2 242440808 . C . . LowGQX END=242441126 GT ./. chr2 242443433 . G . . LowGQX END=242443533 GT ./. chr2 242447326 . C . . LowGQX END=242447486 GT ./. chr2 242447756 . G . . LowGQX END=242447916 GT ./. chr2 242498867 . C . . LowGQX END=242499121 GT ./. chr2 242501761 . A . . LowGQX END=242501894 GT ./. chr2 242509517 . C . . LowGQX END=242509728 GT ./. chr2 242511710 . A . . LowGQX END=242511840 GT ./. chr2 242524019 . G . . LowGQX END=242524143 GT ./. chr2 242541229 . C . . LowGQX END=242541417 GT ./. chr2 242542383 . A . . LowGQX END=242542497 GT ./. chr2 242545727 . A . . LowGQX END=242545891 GT ./. chr2 242556779 . A . . LowGQX END=242556879 GT ./. chr2 242572330 . A . . LowGQX END=242573497 GT ./. chr2 242576285 . C . . LowGQX END=242576445 GT ./. chr2 242576687 . C . . LowGQX END=242576887 GT ./. chr2 242576937 . G . . LowGQX END=242577154 GT ./. chr2 242590422 . C . . LowGQX END=242590527 GT ./. chr2 242590665 . T . . LowGQX END=242590765 GT ./. chr2 242591294 . A . . LowGQX END=242591394 GT ./. chr2 242592697 . G . . LowGQX END=242592797 GT ./. chr2 242592926 . G . . LowGQX END=242593026 GT ./. chr2 242593960 . G . . LowGQX END=242594063 GT ./. chr2 242594672 . T . . LowGQX END=242594772 GT ./. chr2 242598522 . G . . LowGQX END=242598864 GT ./. chr2 242606011 . A . . LowGQX END=242606254 GT ./. chr2 242607547 . C . . LowGQX END=242607647 GT ./. chr2 242607815 . G . . LowGQX END=242608165 GT ./. chr2 242610119 . G . . LowGQX END=242610219 GT ./. chr2 242610726 . G . . LowGQX END=242610961 GT ./. chr2 242611593 . C . . LowGQX END=242611693 GT ./. chr2 242613005 . T . . LowGQX END=242613164 GT ./. chr2 242615540 . G . . LowGQX END=242615700 GT ./. chr2 242617865 . A . . LowGQX END=242618067 GT ./. chr2 242619640 . T . . LowGQX END=242619740 GT ./. chr2 242621588 . C . . LowGQX END=242621749 GT ./. chr2 242622163 . C . . LowGQX END=242622331 GT ./. chr2 242624098 . A . . LowGQX END=242624198 GT ./. chr2 242625182 . A . . LowGQX END=242625295 GT ./. chr2 242626036 . G . . LowGQX END=242626201 GT ./. chr2 242641389 . C . . LowGQX END=242641549 GT ./. chr2 242644054 . T . . LowGQX END=242644154 GT ./. chr2 242648629 . A . . LowGQX END=242648800 GT ./. chr2 242650790 . A . . LowGQX END=242650942 GT ./. chr2 242651390 . C . . LowGQX END=242651490 GT ./. chr2 242658898 . T . . LowGQX END=242659037 GT ./. chr2 242662352 . A . . LowGQX END=242662492 GT ./. chr2 242662606 . T . . LowGQX END=242662706 GT ./. chr2 242663156 . A . . LowGQX END=242663256 GT ./. chr2 242664376 . G . . LowGQX END=242664476 GT ./. chr2 242674589 . G . . LowGQX END=242674983 GT ./. chr2 242680397 . T . . LowGQX END=242680557 GT ./. chr2 242681799 . T . . LowGQX END=242682041 GT ./. chr2 242682986 . C . . LowGQX END=242683282 GT ./. chr2 242684073 . G . . LowGQX END=242684344 GT ./. chr2 242688242 . G . . LowGQX END=242688405 GT ./. chr2 242688678 . A . . LowGQX END=242688778 GT ./. chr2 242689515 . T . . LowGQX END=242689761 GT ./. chr2 242690610 . G . . LowGQX END=242690855 GT ./. chr2 242694430 . G . . LowGQX END=242695481 GT ./. chr2 242707074 . G . . LowGQX END=242707436 GT ./. chr2 242716336 . C . . LowGQX END=242716436 GT ./. chr2 242738475 . C . . LowGQX END=242738575 GT ./. chr2 242741194 . A . . LowGQX END=242741454 GT ./. chr2 242742758 . A . . LowGQX END=242743584 GT ./. chr2 242750226 . T . . LowGQX END=242750386 GT ./. chr2 242752491 . G . . LowGQX END=242752591 GT ./. chr2 242754694 . A . . LowGQX END=242754808 GT ./. chr2 242755286 . A . . LowGQX END=242755406 GT ./. chr2 242755675 . G . . LowGQX END=242755885 GT ./. chr2 242756087 . A . . LowGQX END=242756347 GT ./. chr2 242756826 . C . . LowGQX END=242756926 GT ./. chr2 242757375 . A . . LowGQX END=242758377 GT ./. chr2 242793208 . G . . LowGQX END=242793452 GT ./. chr2 242794009 . C . . LowGQX END=242794169 GT ./. chr2 242794318 . C . . LowGQX END=242794508 GT ./. chr2 242794771 . A . . LowGQX END=242795135 GT ./. chr2 242800843 . T . . LowGQX END=242801003 GT ./. chr2 242811877 . C . . LowGQX END=242812097 GT ./. chr2 242813097 . A . . LowGQX END=242813197 GT ./. chr2 242813853 . T . . LowGQX END=242815429 GT ./. chr2 242836363 . C . . LowGQX END=242836491 GT ./. chr2 242839336 . C . . LowGQX END=242839486 GT ./. chr2 242841228 . G . . LowGQX END=242841328 GT ./. chr2 242842465 . T . . LowGQX END=242842565 GT ./. chr2 242946000 . A . . LowGQX END=242946636 GT ./. chr3 239330 . A . . LowGQX END=239609 GT ./. chr3 361388 . A . . LowGQX END=361556 GT ./. chr3 367640 . A . . LowGQX END=367750 GT ./. chr3 369848 . A . . LowGQX END=370040 GT ./. chr3 382475 . A . . LowGQX END=382645 GT ./. chr3 383593 . A . . LowGQX END=383768 GT ./. chr3 384641 . T . . LowGQX END=384741 GT ./. chr3 386270 . A . . LowGQX END=386395 GT ./. chr3 391020 . T . . LowGQX END=391229 GT ./. chr3 396321 . A . . LowGQX END=396457 GT ./. chr3 401965 . A . . LowGQX END=402110 GT ./. chr3 403380 . A . . LowGQX END=403496 GT ./. chr3 404898 . A . . LowGQX END=405069 GT ./. chr3 407631 . A . . LowGQX END=407821 GT ./. chr3 418040 . G . . LowGQX END=418140 GT ./. chr3 419499 . A . . LowGQX END=419628 GT ./. chr3 423860 . A . . LowGQX END=423966 GT ./. chr3 424155 . A . . LowGQX END=424357 GT ./. chr3 425485 . T . . LowGQX END=425585 GT ./. chr3 430933 . A . . LowGQX END=431160 GT ./. chr3 432382 . A . . LowGQX END=432502 GT ./. chr3 432636 . A . . LowGQX END=432845 GT ./. chr3 433306 . T . . LowGQX END=433483 GT ./. chr3 436374 . A . . LowGQX END=436558 GT ./. chr3 439908 . A . . LowGQX END=440071 GT ./. chr3 440698 . A . . LowGQX END=440834 GT ./. chr3 443237 . T . . LowGQX END=443396 GT ./. chr3 447176 . A . . LowGQX END=447397 GT ./. chr3 1134420 . A . . LowGQX END=1134609 GT ./. chr3 1189671 . T . . LowGQX END=1189771 GT ./. chr3 1214888 . A . . LowGQX END=1215003 GT ./. chr3 1262369 . A . . LowGQX END=1262500 GT ./. chr3 1269480 . T . . LowGQX END=1269680 GT ./. chr3 1320095 . A . . LowGQX END=1320195 GT ./. chr3 1337283 . A . . LowGQX END=1337491 GT ./. chr3 1339521 . T . . LowGQX END=1339680 GT ./. chr3 1363332 . A . . LowGQX END=1363521 GT ./. chr3 1367497 . A . . LowGQX END=1367638 GT ./. chr3 1369099 . T . . LowGQX END=1369273 GT ./. chr3 1371467 . A . . LowGQX END=1371622 GT ./. chr3 1394006 . A . . LowGQX END=1394175 GT ./. chr3 1413981 . A . . LowGQX END=1414161 GT ./. chr3 1414520 . A . . LowGQX END=1414642 GT ./. chr3 1415256 . C . . LowGQX END=1415449 GT ./. chr3 1415606 . A . . LowGQX END=1415760 GT ./. chr3 1418675 . T . . LowGQX END=1418775 GT ./. chr3 1424624 . A . . LowGQX END=1424863 GT ./. chr3 1424975 . A . . LowGQX END=1425095 GT ./. chr3 1427293 . A . . LowGQX END=1427484 GT ./. chr3 1443065 . T . . LowGQX END=1443232 GT ./. chr3 1444000 . A . . LowGQX END=1444173 GT ./. chr3 1445000 . A . . LowGQX END=1445105 GT ./. chr3 2613137 . C . . LowGQX END=2613294 GT ./. chr3 2671187 . T . . LowGQX END=2671287 GT ./. chr3 2777611 . C . . LowGQX END=2777711 GT ./. chr3 2777848 . T . . LowGQX END=2778077 GT ./. chr3 2787155 . A . . LowGQX END=2787433 GT ./. chr3 2861119 . T . . LowGQX END=2861317 GT ./. chr3 2908385 . G . . LowGQX END=2908685 GT ./. chr3 2924778 . T . . LowGQX END=2924983 GT ./. chr3 2928673 . A . . LowGQX END=2928960 GT ./. chr3 2942318 . A . . LowGQX END=2942557 GT ./. chr3 2944509 . A . . LowGQX END=2944741 GT ./. chr3 2967262 . T . . LowGQX END=2967515 GT ./. chr3 2968951 . C . . LowGQX END=2969051 GT ./. chr3 3029978 . G . . LowGQX END=3030208 GT ./. chr3 3067745 . A . . LowGQX END=3068013 GT ./. chr3 3072488 . A . . LowGQX END=3072711 GT ./. chr3 3076265 . T . . LowGQX END=3076526 GT ./. chr3 3078812 . T . . LowGQX END=3079067 GT ./. chr3 3080566 . C . . LowGQX END=3080739 GT ./. chr3 3081670 . A . . LowGQX END=3082007 GT ./. chr3 3083943 . C . . LowGQX END=3084158 GT ./. chr3 3084610 . A . . LowGQX END=3084899 GT ./. chr3 3085225 . T . . LowGQX END=3085440 GT ./. chr3 3095440 . T . . LowGQX END=3095711 GT ./. chr3 3097753 . C . . LowGQX END=3097956 GT ./. chr3 3111903 . T . . LowGQX END=3112003 GT ./. chr3 3115432 . T . . LowGQX END=3115532 GT ./. chr3 3116459 . A . . LowGQX END=3116559 GT ./. chr3 3118213 . A . . LowGQX END=3118314 GT ./. chr3 3131824 . T . . LowGQX END=3131984 GT ./. chr3 3133899 . G . . LowGQX END=3134049 GT ./. chr3 3136981 . A . . LowGQX END=3137161 GT ./. chr3 3139552 . A . . LowGQX END=3139744 GT ./. chr3 3139819 . A . . LowGQX END=3139977 GT ./. chr3 3143374 . A . . LowGQX END=3143517 GT ./. chr3 3144357 . A . . LowGQX END=3144507 GT ./. chr3 3146578 . G . . LowGQX END=3146678 GT ./. chr3 3170723 . A . . LowGQX END=3170875 GT ./. chr3 3171506 . T . . LowGQX END=3171666 GT ./. chr3 3178274 . C . . LowGQX END=3178434 GT ./. chr3 3178942 . A . . LowGQX END=3179140 GT ./. chr3 3182192 . A . . LowGQX END=3182335 GT ./. chr3 3186216 . C . . LowGQX END=3186397 GT ./. chr3 3188112 . A . . LowGQX END=3188310 GT ./. chr3 3189132 . A . . LowGQX END=3189390 GT ./. chr3 3189588 . A . . LowGQX END=3189841 GT ./. chr3 3192498 . A . . LowGQX END=3192781 GT ./. chr3 3194099 . T . . LowGQX END=3194323 GT ./. chr3 3195057 . C . . LowGQX END=3195224 GT ./. chr3 3195593 . T . . LowGQX END=3195811 GT ./. chr3 3196380 . T . . LowGQX END=3196567 GT ./. chr3 3197852 . A . . LowGQX END=3198017 GT ./. chr3 3209264 . A . . LowGQX END=3209529 GT ./. chr3 3214409 . T . . LowGQX END=3214661 GT ./. chr3 3215692 . C . . LowGQX END=3215997 GT ./. chr3 3216796 . C . . LowGQX END=3217005 GT ./. chr3 3221254 . C . . LowGQX END=3221423 GT ./. chr3 3869099 . G . . LowGQX END=3869199 GT ./. chr3 3886324 . G . . LowGQX END=3888479 GT ./. chr3 4046827 . A . . LowGQX END=4046927 GT ./. chr3 4110252 . C . . LowGQX END=4110430 GT ./. chr3 4270963 . A . . LowGQX END=4271063 GT ./. chr3 4345014 . C . . LowGQX END=4345242 GT ./. chr3 4345356 . A . . LowGQX END=4345532;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr3 4345533 . G . 6.42 LowGQX DP=1;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:0:1:0.01:60:0 chr3 4345534 . T . . LowGQX END=4345553;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr3 4354580 . A . . LowGQX END=4355524 GT ./. chr3 4357894 . A . . LowGQX END=4358933 GT ./. chr3 4403777 . T . . LowGQX END=4403990 GT ./. chr3 4417954 . T . . LowGQX END=4418125 GT ./. chr3 4452498 . A . . LowGQX END=4452714 GT ./. chr3 4458761 . A . . LowGQX END=4458978 GT ./. chr3 4459643 . T . . LowGQX END=4459868 GT ./. chr3 4461697 . A . . LowGQX END=4461882 GT ./. chr3 4490899 . C . . LowGQX END=4491076 GT ./. chr3 4494509 . T . . LowGQX END=4494785 GT ./. chr3 4508609 . C . . LowGQX END=4508981 GT ./. chr3 4558172 . A . . LowGQX END=4558325 GT ./. chr3 4562653 . G . . LowGQX END=4562813 GT ./. chr3 4669415 . T . . LowGQX END=4669563 GT ./. chr3 4681031 . T . . LowGQX END=4681191 GT ./. chr3 4683776 . G . . LowGQX END=4683936 GT ./. chr3 4685779 . A . . LowGQX END=4685919 GT ./. chr3 4687023 . A . . LowGQX END=4687155 GT ./. chr3 4687265 . G . . LowGQX END=4687481 GT ./. chr3 4693765 . G . . LowGQX END=4693925 GT ./. chr3 4695488 . A . . LowGQX END=4695588 GT ./. chr3 4699807 . G . . LowGQX END=4699963 GT ./. chr3 4702671 . G . . LowGQX END=4702792 GT ./. chr3 4703765 . G . . LowGQX END=4703927 GT ./. chr3 4704748 . G . . LowGQX END=4704891 GT ./. chr3 4706811 . T . . LowGQX END=4706981 GT ./. chr3 4709030 . C . . LowGQX END=4709234 GT ./. chr3 4711327 . T . . LowGQX END=4711458 GT ./. chr3 4712402 . T . . LowGQX END=4712611 GT ./. chr3 4714819 . G . . LowGQX END=4715072 GT ./. chr3 4715865 . T . . LowGQX END=4716028 GT ./. chr3 4716751 . G . . LowGQX END=4716933 GT ./. chr3 4718297 . G . . LowGQX END=4718486 GT ./. chr3 4722236 . G . . LowGQX END=4722376 GT ./. chr3 4723035 . T . . LowGQX END=4723155 GT ./. chr3 4725059 . T . . LowGQX END=4725236 GT ./. chr3 4725311 . G . . LowGQX END=4725483 GT ./. chr3 4725938 . C . . LowGQX END=4726038 GT ./. chr3 4726742 . C . . LowGQX END=4726891 GT ./. chr3 4730178 . G . . LowGQX END=4730305 GT ./. chr3 4732827 . G . . LowGQX END=4733029 GT ./. chr3 4735173 . G . . LowGQX END=4735426 GT ./. chr3 4738830 . G . . LowGQX END=4738957 GT ./. chr3 4741496 . G . . LowGQX END=4741626 GT ./. chr3 4744513 . G . . LowGQX END=4744635 GT ./. chr3 4747850 . G . . LowGQX END=4748036 GT ./. chr3 4752008 . G . . LowGQX END=4752158 GT ./. chr3 4753417 . A . . LowGQX END=4753553 GT ./. chr3 4759037 . T . . LowGQX END=4759137 GT ./. chr3 4767139 . G . . LowGQX END=4767298 GT ./. chr3 4768744 . C . . LowGQX END=4768858 GT ./. chr3 4774720 . T . . LowGQX END=4774905 GT ./. chr3 4776847 . G . . LowGQX END=4777039 GT ./. chr3 4808213 . G . . LowGQX END=4808395 GT ./. chr3 4810194 . G . . LowGQX END=4810449 GT ./. chr3 4816915 . C . . LowGQX END=4817127 GT ./. chr3 4818947 . G . . LowGQX END=4819063 GT ./. chr3 4821222 . T . . LowGQX END=4821330 GT ./. chr3 4824292 . T . . LowGQX END=4824426 GT ./. chr3 4825462 . A . . LowGQX END=4825605 GT ./. chr3 4829630 . G . . LowGQX END=4829824 GT ./. chr3 4836748 . G . . LowGQX END=4836872 GT ./. chr3 4842108 . G . . LowGQX END=4842285 GT ./. chr3 4847786 . G . . LowGQX END=4847952 GT ./. chr3 4852948 . G . . LowGQX END=4853145 GT ./. chr3 4854782 . A . . LowGQX END=4854919 GT ./. chr3 4856047 . A . . LowGQX END=4856247 GT ./. chr3 4856736 . G . . LowGQX END=4856903 GT ./. chr3 4859725 . G . . LowGQX END=4859927 GT ./. chr3 4867378 . T . . LowGQX END=4867547 GT ./. chr3 4872617 . A . . LowGQX END=4872717 GT ./. chr3 4878457 . G . . LowGQX END=4878620 GT ./. chr3 4887822 . G . . LowGQX END=4887936 GT ./. chr3 4927379 . G . . LowGQX END=4927479 GT ./. chr3 4940462 . T . . LowGQX END=4940621 GT ./. chr3 4942226 . C . . LowGQX END=4942383 GT ./. chr3 5021402 . C . . LowGQX END=5021530 GT ./. chr3 5021632 . T . . LowGQX END=5021732 GT ./. chr3 5021984 . A . . LowGQX END=5022096 GT ./. chr3 5023075 . A . . LowGQX END=5023203 GT ./. chr3 5024498 . C . . LowGQX END=5025380 GT ./. chr3 5163978 . T . . LowGQX END=5164276 GT ./. chr3 5170101 . T . . LowGQX END=5170201 GT ./. chr3 5212179 . T . . LowGQX END=5212279 GT ./. chr3 5213822 . T . . LowGQX END=5213922 GT ./. chr3 5214329 . A . . LowGQX END=5214429 GT ./. chr3 5215630 . A . . LowGQX END=5215786 GT ./. chr3 5216015 . A . . LowGQX END=5216115 GT ./. chr3 5220347 . A . . LowGQX END=5220469 GT ./. chr3 5229468 . A . . LowGQX END=5230002 GT ./. chr3 5236881 . T . . LowGQX END=5236981 GT ./. chr3 5241275 . A . . LowGQX END=5241383 GT ./. chr3 5243396 . A . . LowGQX END=5243612 GT ./. chr3 5244638 . T . . LowGQX END=5244837 GT ./. chr3 5246750 . A . . LowGQX END=5246929 GT ./. chr3 5248836 . A . . LowGQX END=5248961 GT ./. chr3 5249776 . A . . LowGQX END=5249986 GT ./. chr3 5251847 . G . . LowGQX END=5251947 GT ./. chr3 5252803 . A . . LowGQX END=5252938 GT ./. chr3 5255002 . A . . LowGQX END=5255210 GT ./. chr3 5257452 . G . . LowGQX END=5257609 GT ./. chr3 6811663 . T . . LowGQX END=6811823 GT ./. chr3 6828277 . A . . LowGQX END=6828377 GT ./. chr3 6870290 . A . . LowGQX END=6870390 GT ./. chr3 6903074 . G . . LowGQX END=6903597 GT ./. chr3 6904629 . C . . LowGQX END=6904729 GT ./. chr3 6998231 . C . . LowGQX END=6998331 GT ./. chr3 7188137 . A . . LowGQX END=7188358 GT ./. chr3 7340369 . A . . LowGQX END=7340559 GT ./. chr3 7348153 . A . . LowGQX END=7348342 GT ./. chr3 7444817 . A . . LowGQX END=7444917 GT ./. chr3 7456708 . A . . LowGQX END=7456853 GT ./. chr3 7494292 . A . . LowGQX END=7494499 GT ./. chr3 7503268 . A . . LowGQX END=7503412 GT ./. chr3 7603187 . T . . LowGQX END=7603287 GT ./. chr3 7620107 . A . . LowGQX END=7621049 GT ./. chr3 7633108 . C . . LowGQX END=7633208 GT ./. chr3 7649686 . C . . LowGQX END=7649786 GT ./. chr3 7677899 . C . . LowGQX END=7677999 GT ./. chr3 7721734 . A . . LowGQX END=7721991 GT ./. chr3 7728030 . T . . LowGQX END=7728130 GT ./. chr3 7732710 . T . . LowGQX END=7732810 GT ./. chr3 7732866 . A . . LowGQX END=7732966 GT ./. chr3 7735281 . A . . LowGQX END=7735381 GT ./. chr3 7781962 . T . . LowGQX END=7782119 GT ./. chr3 8543596 . C . . LowGQX END=8543696 GT ./. chr3 8556602 . T . . LowGQX END=8556702 GT ./. chr3 8574418 . T . . LowGQX END=8574518 GT ./. chr3 8578869 . A . . LowGQX END=8579129 GT ./. chr3 8590252 . A . . LowGQX END=8590592 GT ./. chr3 8591520 . G . . LowGQX END=8591620 GT ./. chr3 8607116 . A . . LowGQX END=8607336 GT ./. chr3 8609124 . A . . LowGQX END=8609287 GT ./. chr3 8661552 . T . . LowGQX END=8661703 GT ./. chr3 8665161 . A . . LowGQX END=8665345 GT ./. chr3 8667226 . A . . LowGQX END=8667336 GT ./. chr3 8667912 . T . . LowGQX END=8668012 GT ./. chr3 8669377 . C . . LowGQX END=8669477 GT ./. chr3 8671332 . G . . LowGQX END=8671432 GT ./. chr3 8672489 . A . . LowGQX END=8672618 GT ./. chr3 8673716 . T . . LowGQX END=8673816 GT ./. chr3 8675350 . A . . LowGQX END=8675627 GT ./. chr3 8676084 . T . . LowGQX END=8676332 GT ./. chr3 8676977 . G . . LowGQX END=8677077 GT ./. chr3 8677444 . C . . LowGQX END=8677544 GT ./. chr3 8686381 . C . . LowGQX END=8686481 GT ./. chr3 8701409 . A . . LowGQX END=8701509 GT ./. chr3 8705430 . C . . LowGQX END=8705598 GT ./. chr3 8712647 . C . . LowGQX END=8712747 GT ./. chr3 8757382 . A . . LowGQX END=8757573 GT ./. chr3 8775512 . C . . LowGQX END=8775728 GT ./. chr3 8784127 . T . . LowGQX END=8784227 GT ./. chr3 8787161 . G . . LowGQX END=8787605 GT ./. chr3 8794661 . G . . LowGQX END=8794913 GT ./. chr3 8808950 . A . . LowGQX END=8809883 GT ./. chr3 8817253 . A . . LowGQX END=8817353 GT ./. chr3 8923039 . C . . LowGQX END=8923146 GT ./. chr3 8932055 . A . . LowGQX END=8932155 GT ./. chr3 8940576 . A . . LowGQX END=8940734 GT ./. chr3 8944062 . A . . LowGQX END=8944207 GT ./. chr3 8953924 . T . . LowGQX END=8954077 GT ./. chr3 8955317 . C . . LowGQX END=8955417 GT ./. chr3 8977553 . A . . LowGQX END=8977742 GT ./. chr3 8981236 . A . . LowGQX END=8981340 GT ./. chr3 8983149 . A . . LowGQX END=8983491 GT ./. chr3 8988890 . A . . LowGQX END=8988990 GT ./. chr3 8990174 . A . . LowGQX END=8990274 GT ./. chr3 9000595 . C . . LowGQX END=9000695 GT ./. chr3 9004995 . T . . LowGQX END=9005095 GT ./. chr3 9027152 . T . . LowGQX END=9027668 GT ./. chr3 9032145 . C . . LowGQX END=9032575 GT ./. chr3 9034539 . A . . LowGQX END=9034791 GT ./. chr3 9035976 . A . . LowGQX END=9036259 GT ./. chr3 9051941 . T . . LowGQX END=9052123 GT ./. chr3 9054941 . A . . LowGQX END=9055271 GT ./. chr3 9055370 . C . . LowGQX END=9055578 GT ./. chr3 9057230 . T . . LowGQX END=9057467 GT ./. chr3 9066894 . T . . LowGQX END=9067074 GT ./. chr3 9068568 . T . . LowGQX END=9068731 GT ./. chr3 9069733 . A . . LowGQX END=9069869 GT ./. chr3 9074283 . C . . LowGQX END=9074488 GT ./. chr3 9079695 . C . . LowGQX END=9079831 GT ./. chr3 9089024 . A . . LowGQX END=9089211 GT ./. chr3 9091081 . G . . LowGQX END=9091181 GT ./. chr3 9094660 . C . . LowGQX END=9094960 GT ./. chr3 9097866 . A . . LowGQX END=9098070 GT ./. chr3 9099884 . G . . LowGQX END=9100208 GT ./. chr3 9101817 . T . . LowGQX END=9102095 GT ./. chr3 9106029 . T . . LowGQX END=9106317 GT ./. chr3 9121658 . T . . LowGQX END=9121823 GT ./. chr3 9122892 . T . . LowGQX END=9122992 GT ./. chr3 9146313 . G . . LowGQX END=9146578 GT ./. chr3 9166358 . C . . LowGQX END=9166653 GT ./. chr3 9290518 . G . . LowGQX END=9290687 GT ./. chr3 9406751 . A . . LowGQX END=9407007 GT ./. chr3 9408581 . T . . LowGQX END=9408681 GT ./. chr3 9412742 . A . . LowGQX END=9413223 GT ./. chr3 9416198 . A . . LowGQX END=9416333 GT ./. chr3 9419488 . T . . LowGQX END=9419588 GT ./. chr3 9422185 . A . . LowGQX END=9422305 GT ./. chr3 9424881 . A . . LowGQX END=9424996 GT ./. chr3 9425894 . A . . LowGQX END=9426022 GT ./. chr3 9426206 . A . . LowGQX END=9426375 GT ./. chr3 9470608 . G . . LowGQX END=9470708 GT ./. chr3 9471504 . C . . LowGQX END=9471604 GT ./. chr3 9475054 . G . . LowGQX END=9475178 GT ./. chr3 9475528 . G . . LowGQX END=9475635 GT ./. chr3 9475785 . A . . LowGQX END=9475885 GT ./. chr3 9475960 . G . . LowGQX END=9476170 GT ./. chr3 9476487 . A . . LowGQX END=9476587 GT ./. chr3 9477411 . G . . LowGQX END=9477591 GT ./. chr3 9478503 . T . . LowGQX END=9478603 GT ./. chr3 9482139 . G . . LowGQX END=9482383 GT ./. chr3 9483276 . G . . LowGQX END=9483456 GT ./. chr3 9483811 . G . . LowGQX END=9483930 GT ./. chr3 9484897 . C . . LowGQX END=9485102 GT ./. chr3 9486731 . G . . LowGQX END=9487069 GT ./. chr3 9487304 . A . . LowGQX END=9487425 GT ./. chr3 9488733 . G . . LowGQX END=9488992 GT ./. chr3 9489369 . G . . LowGQX END=9489691 GT ./. chr3 9490071 . G . . LowGQX END=9490315 GT ./. chr3 9495422 . G . . LowGQX END=9495553 GT ./. chr3 9506108 . G . . LowGQX END=9506429 GT ./. chr3 9510182 . A . . LowGQX END=9510282 GT ./. chr3 9512142 . G . . LowGQX END=9512614 GT ./. chr3 9514919 . G . . LowGQX END=9515222 GT ./. chr3 9516132 . G . . LowGQX END=9516267 GT ./. chr3 9516746 . T . . LowGQX END=9516846 GT ./. chr3 9517166 . G . . LowGQX END=9517776 GT ./. chr3 9520240 . A . . LowGQX END=9520340 GT ./. chr3 9543893 . T . . LowGQX END=9543998 GT ./. chr3 9547649 . G . . LowGQX END=9547890 GT ./. chr3 9593956 . A . . LowGQX END=9594366 GT ./. chr3 9691217 . C . . LowGQX END=9691478 GT ./. chr3 9691989 . C . . LowGQX END=9692089 GT ./. chr3 9695254 . C . . LowGQX END=9695505 GT ./. chr3 9701400 . A . . LowGQX END=9701500 GT ./. chr3 9703900 . A . . LowGQX END=9704111 GT ./. chr3 9710352 . G . . LowGQX END=9710530 GT ./. chr3 9711065 . T . . LowGQX END=9711234 GT ./. chr3 9712681 . T . . LowGQX END=9712906 GT ./. chr3 9714318 . T . . LowGQX END=9714494 GT ./. chr3 9717273 . T . . LowGQX END=9717373 GT ./. chr3 9718950 . A . . LowGQX END=9719123 GT ./. chr3 9719617 . A . . LowGQX END=9719794 GT ./. chr3 9724811 . T . . LowGQX END=9724980 GT ./. chr3 9726218 . G . . LowGQX END=9726406 GT ./. chr3 9726521 . C . . LowGQX END=9726700 GT ./. chr3 9726833 . T . . LowGQX END=9726983 GT ./. chr3 9729454 . T . . LowGQX END=9729627 GT ./. chr3 9730319 . C . . LowGQX END=9730490 GT ./. chr3 9730577 . C . . LowGQX END=9730818 GT ./. chr3 9731597 . G . . LowGQX END=9731879 GT ./. chr3 9739344 . C . . LowGQX END=9739602 GT ./. chr3 9743423 . G . . LowGQX END=9743709 GT ./. chr3 9745609 . C . . LowGQX END=9745765 GT ./. chr3 9746242 . C . . LowGQX END=9746342 GT ./. chr3 9746407 . C . . LowGQX END=9746507 GT ./. chr3 9746573 . A . . LowGQX END=9746681 GT ./. chr3 9747117 . C . . LowGQX END=9747217 GT ./. chr3 9747294 . G . . LowGQX END=9747454 GT ./. chr3 9747659 . T . . LowGQX END=9747759 GT ./. chr3 9754207 . G . . LowGQX END=9754307 GT ./. chr3 9754407 . A . . LowGQX END=9754515 GT ./. chr3 9754657 . A . . LowGQX END=9754766 GT ./. chr3 9756569 . C . . LowGQX END=9756669 GT ./. chr3 9756961 . A . . LowGQX END=9757061 GT ./. chr3 9757134 . T . . LowGQX END=9757234 GT ./. chr3 9757639 . T . . LowGQX END=9757739 GT ./. chr3 9758716 . T . . LowGQX END=9758816 GT ./. chr3 9759711 . A . . LowGQX END=9759897 GT ./. chr3 9760157 . A . . LowGQX END=9760289 GT ./. chr3 9767580 . T . . LowGQX END=9767738 GT ./. chr3 9768328 . T . . LowGQX END=9768428 GT ./. chr3 9768784 . G . . LowGQX END=9768884 GT ./. chr3 9768999 . C . . LowGQX END=9769099 GT ./. chr3 9771189 . A . . LowGQX END=9771379 GT ./. chr3 9775823 . G . . LowGQX END=9776426 GT ./. chr3 9780681 . A . . LowGQX END=9781645 GT ./. chr3 9782461 . A . . LowGQX END=9782628 GT ./. chr3 9782990 . A . . LowGQX END=9783126 GT ./. chr3 9783707 . A . . LowGQX END=9783858 GT ./. chr3 9784626 . A . . LowGQX END=9784940 GT ./. chr3 9785260 . A . . LowGQX END=9785588 GT ./. chr3 9785906 . A . . LowGQX END=9786195 GT ./. chr3 9786650 . T . . LowGQX END=9786842 GT ./. chr3 9787255 . A . . LowGQX END=9787396 GT ./. chr3 9787494 . A . . LowGQX END=9787617 GT ./. chr3 9787982 . A . . LowGQX END=9788141 GT ./. chr3 9788848 . A . . LowGQX END=9789036 GT ./. chr3 9791920 . G . . LowGQX END=9792159 GT ./. chr3 9792578 . G . . LowGQX END=9792928 GT ./. chr3 9793403 . C . . LowGQX END=9793685 GT ./. chr3 9796337 . A . . LowGQX END=9796621 GT ./. chr3 9798104 . T . . LowGQX END=9798357 GT ./. chr3 9798399 . T . . LowGQX END=9798587 GT ./. chr3 9798677 . T . . LowGQX END=9799064 GT ./. chr3 9799201 . T . . LowGQX END=9799533 GT ./. chr3 9800820 . G . . LowGQX END=9801022 GT ./. chr3 9801166 . A . . LowGQX END=9801266 GT ./. chr3 9801354 . A . . LowGQX END=9801502 GT ./. chr3 9802338 . A . . LowGQX END=9802455 GT ./. chr3 9803133 . A . . LowGQX END=9803233 GT ./. chr3 9803313 . A . . LowGQX END=9803444 GT ./. chr3 9804596 . A . . LowGQX END=9804739 GT ./. chr3 9804811 . T . . LowGQX END=9804911 GT ./. chr3 9807417 . G . . LowGQX END=9807931 GT ./. chr3 9809343 . G . . LowGQX END=9809443 GT ./. chr3 9822039 . G . . LowGQX END=9822236 GT ./. chr3 9823191 . T . . LowGQX END=9823291 GT ./. chr3 9825706 . G . . LowGQX END=9825900 GT ./. chr3 9826998 . A . . LowGQX END=9827112 GT ./. chr3 9828688 . A . . LowGQX END=9828796 GT ./. chr3 9828871 . T . . LowGQX END=9829076 GT ./. chr3 9829363 . C . . LowGQX END=9829463 GT ./. chr3 9831191 . A . . LowGQX END=9831301 GT ./. chr3 9831395 . A . . LowGQX END=9831650 GT ./. chr3 9832942 . A . . LowGQX END=9833153 GT ./. chr3 9834725 . G . . LowGQX END=9834885 GT ./. chr3 9839341 . A . . LowGQX END=9839464 GT ./. chr3 9841518 . G . . LowGQX END=9841618 GT ./. chr3 9841867 . A . . LowGQX END=9841983 GT ./. chr3 9843343 . A . . LowGQX END=9843443 GT ./. chr3 9845175 . A . . LowGQX END=9845275 GT ./. chr3 9845525 . A . . LowGQX END=9845700 GT ./. chr3 9847847 . G . . LowGQX END=9847947 GT ./. chr3 9851690 . C . . LowGQX END=9852079 GT ./. chr3 9852300 . T . . LowGQX END=9852400 GT ./. chr3 9854625 . A . . LowGQX END=9854798 GT ./. chr3 9854930 . A . . LowGQX END=9855032 GT ./. chr3 9857758 . T . . LowGQX END=9857889 GT ./. chr3 9859327 . A . . LowGQX END=9859452 GT ./. chr3 9860214 . G . . LowGQX END=9860314 GT ./. chr3 9860504 . A . . LowGQX END=9860607 GT ./. chr3 9862228 . A . . LowGQX END=9862428 GT ./. chr3 9867350 . A . . LowGQX END=9867635 GT ./. chr3 9868679 . A . . LowGQX END=9868929 GT ./. chr3 9870594 . A . . LowGQX END=9871082 GT ./. chr3 9874765 . T . . LowGQX END=9874976 GT ./. chr3 9876100 . C . . LowGQX END=9876200 GT ./. chr3 9876363 . A . . LowGQX END=9876610 GT ./. chr3 9876776 . A . . LowGQX END=9877176 GT ./. chr3 9879698 . G . . LowGQX END=9879894 GT ./. chr3 9880669 . C . . LowGQX END=9880858 GT ./. chr3 9881842 . A . . LowGQX END=9882042 GT ./. chr3 9882099 . T . . LowGQX END=9882303 GT ./. chr3 9882380 . A . . LowGQX END=9882492 GT ./. chr3 9883595 . T . . LowGQX END=9883769 GT ./. chr3 9883856 . T . . LowGQX END=9883956 GT ./. chr3 9885147 . A . . LowGQX END=9885288 GT ./. chr3 9885373 . G . . LowGQX END=9885473 GT ./. chr3 9885572 . A . . LowGQX END=9885615;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr3 9885616 . A . 36.01 LowGQX DP=4;MQ=60;MQ0=0 GT:AD:DP:GQ:MQ:GQX 0/0:3:4:6.02:60:6 chr3 9885617 . C . . LowGQX END=9885648;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr3 9885649 . C . . LowGQX END=9885744 GT ./. chr3 9896224 . T . . LowGQX END=9896324 GT ./. chr3 9908752 . C . . LowGQX END=9909032 GT ./. chr3 9911515 . T . . LowGQX END=9912058 GT ./. chr3 9912094 . T . . LowGQX END=9912194 GT ./. chr3 9918699 . C . . LowGQX END=9918955 GT ./. chr3 9920067 . C . . LowGQX END=9920196 GT ./. chr3 9920440 . G . . LowGQX END=9920540 GT ./. chr3 9932402 . G . . LowGQX END=9932502 GT ./. chr3 9934597 . A . . LowGQX END=9935064 GT ./. chr3 9944229 . C . . LowGQX END=9944388 GT ./. chr3 9944573 . G . . LowGQX END=9944751 GT ./. chr3 9945039 . T . . LowGQX END=9945139 GT ./. chr3 9945714 . A . . LowGQX END=9945838 GT ./. chr3 9948046 . A . . LowGQX END=9948148 GT ./. chr3 9948388 . A . . LowGQX END=9948552 GT ./. chr3 9948643 . A . . LowGQX END=9948787 GT ./. chr3 9949908 . C . . LowGQX END=9950008 GT ./. chr3 9950891 . G . . LowGQX END=9950991 GT ./. chr3 9952547 . A . . LowGQX END=9952727 GT ./. chr3 9952785 . T . . LowGQX END=9952885 GT ./. chr3 9952912 . C . . LowGQX END=9953012 GT ./. chr3 9953125 . A . . LowGQX END=9953284 GT ./. chr3 9955625 . T . . LowGQX END=9955725 GT ./. chr3 9956158 . G . . LowGQX END=9956328 GT ./. chr3 9956361 . A . . LowGQX END=9956464 GT ./. chr3 9956922 . T . . LowGQX END=9957502 GT ./. chr3 9958998 . A . . LowGQX END=9959320 GT ./. chr3 9959358 . G . . LowGQX END=9959458 GT ./. chr3 9959548 . G . . LowGQX END=9959777 GT ./. chr3 9960007 . G . . LowGQX END=9960107 GT ./. chr3 9960182 . A . . LowGQX END=9960296 GT ./. chr3 9962173 . A . . LowGQX END=9962289 GT ./. chr3 9962522 . C . . LowGQX END=9962737 GT ./. chr3 9965563 . A . . LowGQX END=9965789 GT ./. chr3 9965896 . T . . LowGQX END=9965996 GT ./. chr3 9969828 . C . . LowGQX END=9969928 GT ./. chr3 9969987 . A . . LowGQX END=9970187 GT ./. chr3 9970240 . C . . LowGQX END=9970340 GT ./. chr3 9971501 . T . . LowGQX END=9971601 GT ./. chr3 9971710 . A . . LowGQX END=9971836 GT ./. chr3 9972064 . C . . LowGQX END=9972164 GT ./. chr3 9972554 . A . . LowGQX END=9972654 GT ./. chr3 9974219 . C . . LowGQX END=9974390 GT ./. chr3 9974495 . C . . LowGQX END=9975280 GT ./. chr3 9976072 . C . . LowGQX END=9976348 GT ./. chr3 9976468 . C . . LowGQX END=9976653 GT ./. chr3 9979195 . T . . LowGQX END=9979408 GT ./. chr3 9979648 . C . . LowGQX END=9979842 GT ./. chr3 9982483 . G . . LowGQX END=9982942 GT ./. chr3 9984437 . T . . LowGQX END=9984632 GT ./. chr3 9984710 . C . . LowGQX END=9984908 GT ./. chr3 9985014 . G . . LowGQX END=9985251 GT ./. chr3 9985535 . T . . LowGQX END=9985831 GT ./. chr3 9985998 . T . . LowGQX END=9986315 GT ./. chr3 9987909 . C . . LowGQX END=9989691 GT ./. chr3 9990336 . A . . LowGQX END=9990606 GT ./. chr3 9990783 . A . . LowGQX END=9991802 GT ./. chr3 10005751 . C . . LowGQX END=10005884 GT ./. chr3 10011271 . C . . LowGQX END=10011488 GT ./. chr3 10012203 . G . . LowGQX END=10012356 GT ./. chr3 10015302 . A . . LowGQX END=10015402 GT ./. chr3 10016066 . A . . LowGQX END=10016175 GT ./. chr3 10018638 . T . . LowGQX END=10018738 GT ./. chr3 10019052 . T . . LowGQX END=10019152 GT ./. chr3 10023317 . C . . LowGQX END=10023476 GT ./. chr3 10028189 . A . . LowGQX END=10028348 GT ./. chr3 10044451 . A . . LowGQX END=10044979 GT ./. chr3 10049027 . A . . LowGQX END=10049308 GT ./. chr3 10050076 . T . . LowGQX END=10050176 GT ./. chr3 10070291 . T . . LowGQX END=10070457 GT ./. chr3 10073958 . T . . LowGQX END=10074058 GT ./. chr3 10074465 . T . . LowGQX END=10074708 GT ./. chr3 10076097 . A . . LowGQX END=10076272 GT ./. chr3 10076328 . A . . LowGQX END=10076534 GT ./. chr3 10076806 . C . . LowGQX END=10076969 GT ./. chr3 10077917 . T . . LowGQX END=10078075 GT ./. chr3 10080912 . T . . LowGQX END=10081093 GT ./. chr3 10081354 . T . . LowGQX END=10081595 GT ./. chr3 10082172 . A . . LowGQX END=10082272 GT ./. chr3 10083256 . C . . LowGQX END=10083446 GT ./. chr3 10084192 . T . . LowGQX END=10084399 GT ./. chr3 10084683 . C . . LowGQX END=10084886 GT ./. chr3 10085117 . T . . LowGQX END=10085328 GT ./. chr3 10085451 . A . . LowGQX END=10085600 GT ./. chr3 10088213 . T . . LowGQX END=10088459 GT ./. chr3 10089550 . A . . LowGQX END=10089787 GT ./. chr3 10091007 . T . . LowGQX END=10091241 GT ./. chr3 10094020 . A . . LowGQX END=10094233 GT ./. chr3 10101927 . T . . LowGQX END=10102139 GT ./. chr3 10103794 . A . . LowGQX END=10103947 GT ./. chr3 10105425 . T . . LowGQX END=10105647 GT ./. chr3 10105951 . T . . LowGQX END=10106165 GT ./. chr3 10106362 . A . . LowGQX END=10106611 GT ./. chr3 10107027 . G . . LowGQX END=10107230 GT ./. chr3 10107497 . G . . LowGQX END=10107715 GT ./. chr3 10108842 . G . . LowGQX END=10109053 GT ./. chr3 10114504 . T . . LowGQX END=10114717 GT ./. chr3 10114886 . C . . LowGQX END=10115098 GT ./. chr3 10116163 . A . . LowGQX END=10116409 GT ./. chr3 10119714 . C . . LowGQX END=10119933 GT ./. chr3 10122733 . C . . LowGQX END=10122964 GT ./. chr3 10122979 . A . . LowGQX END=10123200 GT ./. chr3 10127445 . C . . LowGQX END=10127658 GT ./. chr3 10128767 . G . . LowGQX END=10128990 GT ./. chr3 10130082 . A . . LowGQX END=10130278 GT ./. chr3 10130461 . T . . LowGQX END=10130686 GT ./. chr3 10131925 . T . . LowGQX END=10132121 GT ./. chr3 10133814 . G . . LowGQX END=10133988 GT ./. chr3 10134918 . T . . LowGQX END=10135059 GT ./. chr3 10135922 . C . . LowGQX END=10136099 GT ./. chr3 10136833 . A . . LowGQX END=10137010 GT ./. chr3 10137959 . A . . LowGQX END=10138208 GT ./. chr3 10140353 . C . . LowGQX END=10140686 GT ./. chr3 10142821 . C . . LowGQX END=10142998 GT ./. chr3 10144676 . C . . LowGQX END=10144827 GT ./. chr3 10145923 . C . . LowGQX END=10146461 GT ./. chr3 10157385 . C . . LowGQX END=10157504 GT ./. chr3 10167301 . T . . LowGQX END=10167401 GT ./. chr3 10167952 . G . . LowGQX END=10168074 GT ./. chr3 10183421 . G . . LowGQX END=10183923 GT ./. chr3 10188147 . C . . LowGQX END=10188372 GT ./. chr3 10191420 . T . . LowGQX END=10191701 GT ./. chr3 10206636 . G . . LowGQX END=10206736 GT ./. chr3 10219500 . G . . LowGQX END=10219707 GT ./. chr3 10242051 . A . . LowGQX END=10242202 GT ./. chr3 10251221 . T . . LowGQX END=10251379 GT ./. chr3 10254889 . A . . LowGQX END=10255088 GT ./. chr3 10255151 . G . . LowGQX END=10255251 GT ./. chr3 10258616 . A . . LowGQX END=10258735 GT ./. chr3 10261362 . A . . LowGQX END=10261476 GT ./. chr3 10264318 . A . . LowGQX END=10264518 GT ./. chr3 10268037 . A . . LowGQX END=10268137 GT ./. chr3 10276141 . A . . LowGQX END=10276346 GT ./. chr3 10280430 . A . . LowGQX END=10280726 GT ./. chr3 10283798 . A . . LowGQX END=10283915 GT ./. chr3 10290883 . C . . LowGQX END=10291310 GT ./. chr3 10301819 . A . . LowGQX END=10302357 GT ./. chr3 10311813 . A . . LowGQX END=10312702 GT ./. chr3 10318043 . A . . LowGQX END=10318175 GT ./. chr3 10319961 . A . . LowGQX END=10320149 GT ./. chr3 10320309 . A . . LowGQX END=10320409 GT ./. chr3 10320497 . C . . LowGQX END=10320745 GT ./. chr3 10327504 . A . . LowGQX END=10327604 GT ./. chr3 10328386 . A . . LowGQX END=10328499 GT ./. chr3 10331403 . C . . LowGQX END=10331565 GT ./. chr3 10331755 . A . . LowGQX END=10331867 GT ./. chr3 10334455 . A . . LowGQX END=10334612 GT ./. chr3 10342761 . C . . LowGQX END=10342861 GT ./. chr3 10342943 . T . . LowGQX END=10343061 GT ./. chr3 10345635 . T . . LowGQX END=10345859 GT ./. chr3 10346665 . T . . LowGQX END=10346843 GT ./. chr3 10347241 . A . . LowGQX END=10347379 GT ./. chr3 10353513 . A . . LowGQX END=10353785 GT ./. chr3 10354261 . A . . LowGQX END=10354417 GT ./. chr3 10355070 . T . . LowGQX END=10355170 GT ./. chr3 10357000 . C . . LowGQX END=10357123 GT ./. chr3 10359707 . T . . LowGQX END=10359807 GT ./. chr3 10360822 . C . . LowGQX END=10360964 GT ./. chr3 10362686 . G . . LowGQX END=10362786 GT ./. chr3 10370447 . G . . LowGQX END=10370861 GT ./. chr3 10373670 . T . . LowGQX END=10373770 GT ./. chr3 10377807 . A . . LowGQX END=10377985 GT ./. chr3 10379809 . C . . LowGQX END=10380094 GT ./. chr3 10381875 . G . . LowGQX END=10382085 GT ./. chr3 10382126 . C . . LowGQX END=10382440 GT ./. chr3 10384385 . C . . LowGQX END=10384701 GT ./. chr3 10387017 . G . . LowGQX END=10387311 GT ./. chr3 10387664 . T . . LowGQX END=10387873 GT ./. chr3 10391745 . T . . LowGQX END=10391935 GT ./. chr3 10392031 . G . . LowGQX END=10392313 GT ./. chr3 10400324 . G . . LowGQX END=10400661 GT ./. chr3 10401515 . T . . LowGQX END=10401859 GT ./. chr3 10413442 . C . . LowGQX END=10413787 GT ./. chr3 10417063 . C . . LowGQX END=10417380 GT ./. chr3 10419885 . C . . LowGQX END=10420146 GT ./. chr3 10420876 . G . . LowGQX END=10421020 GT ./. chr3 10426901 . G . . LowGQX END=10427063 GT ./. chr3 10428113 . G . . LowGQX END=10428248 GT ./. chr3 10429891 . G . . LowGQX END=10430138 GT ./. chr3 10436100 . C . . LowGQX END=10436260 GT ./. chr3 10442586 . A . . LowGQX END=10442814 GT ./. chr3 10443724 . C . . LowGQX END=10444084 GT ./. chr3 10452251 . A . . LowGQX END=10452551 GT ./. chr3 10490978 . A . . LowGQX END=10491279 GT ./. chr3 10857927 . G . . LowGQX END=10858209 GT ./. chr3 10861148 . A . . LowGQX END=10861287 GT ./. chr3 10861395 . A . . LowGQX END=10861540 GT ./. chr3 10864984 . T . . LowGQX END=10865084 GT ./. chr3 10885897 . A . . LowGQX END=10886034 GT ./. chr3 10916644 . A . . LowGQX END=10916783 GT ./. chr3 10953773 . A . . LowGQX END=10953881 GT ./. chr3 10960012 . A . . LowGQX END=10960182 GT ./. chr3 10967688 . A . . LowGQX END=10967805 GT ./. chr3 10970886 . A . . LowGQX END=10971028 GT ./. chr3 10974835 . A . . LowGQX END=10974942 GT ./. chr3 10975750 . A . . LowGQX END=10975855 GT ./. chr3 10976713 . A . . LowGQX END=10976888 GT ./. chr3 10979934 . A . . LowGQX END=10980091 GT ./. chr3 11058896 . A . . LowGQX END=11059040 GT ./. chr3 11059041 . G . . LowGQX END=11059124;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr3 11059125 . A . . LowGQX . GT ./. chr3 11059126 . A . . LowGQX . GT:DP:GQX:MQ 0/0:1:3:60 chr3 11059127 . A . . LowGQX . GT ./. chr3 11059128 . T . . LowGQX END=11059137;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr3 11059138 . A . . LowGQX . GT ./. chr3 11059496 . T . . LowGQX END=11059560;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr3 11059561 . A . . LowGQX END=11059663 GT ./. chr3 11060282 . A . . LowGQX END=11060387 GT ./. chr3 11061897 . A . . LowGQX END=11062011 GT ./. chr3 11064020 . A . . LowGQX END=11064157 GT ./. chr3 11067133 . A . . LowGQX END=11067272 GT ./. chr3 11067457 . A . . LowGQX END=11067565 GT ./. chr3 11067919 . A . . LowGQX END=11068048 GT ./. chr3 11070419 . A . . LowGQX END=11070536 GT ./. chr3 11070905 . A . . LowGQX END=11071041 GT ./. chr3 11072861 . A . . LowGQX END=11072968 GT ./. chr3 11075323 . A . . LowGQX END=11075428 GT ./. chr3 11076215 . A . . LowGQX END=11076387 GT ./. chr3 11078546 . A . . LowGQX END=11078655 GT ./. chr3 11300722 . C . . LowGQX END=11302190 GT ./. chr3 11340168 . T . . LowGQX END=11340332 GT ./. chr3 11340814 . A . . LowGQX END=11340914 GT ./. chr3 11348415 . A . . LowGQX END=11348537 GT ./. chr3 11350447 . T . . LowGQX END=11350547 GT ./. chr3 11354776 . A . . LowGQX END=11354897 GT ./. chr3 11356816 . A . . LowGQX END=11356970 GT ./. chr3 11372809 . C . . LowGQX END=11372909 GT ./. chr3 11374444 . A . . LowGQX END=11374570 GT ./. chr3 11382115 . T . . LowGQX END=11382215 GT ./. chr3 11383607 . A . . LowGQX END=11383756 GT ./. chr3 11389349 . A . . LowGQX END=11389512 GT ./. chr3 11399890 . A . . LowGQX END=11400089 GT ./. chr3 11402053 . A . . LowGQX END=11402261 GT ./. chr3 11404285 . A . . LowGQX END=11404405 GT ./. chr3 11406121 . T . . LowGQX END=11406221 GT ./. chr3 11421437 . T . . LowGQX END=11421537 GT ./. chr3 11468276 . A . . LowGQX END=11468403 GT ./. chr3 11487935 . C . . LowGQX END=11488035 GT ./. chr3 11518561 . A . . LowGQX END=11518661 GT ./. chr3 11551659 . G . . LowGQX END=11551794 GT ./. chr3 11596252 . A . . LowGQX END=11596301 GT ./. chr3 11596302 rs2305295 T C 7.08 LowGQX;LowGQ DP=1;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=0.0000;MQ=60;MQ0=0;QD=7.08;SB=-0.01;TI=NM_006395,NM_001144912,NM_001136031;GI=ATG7,ATG7,ATG7;FC=Synonymous_D699D,Synonymous_D619D,Synonymous_D672D;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,1:1:3.01:36,3,0:60:3:1.000 chr3 11596303 . G . . LowGQX END=11596352;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr3 11600028 . C . . LowGQX END=11600304 GT ./. chr3 11600804 . A . . LowGQX END=11600932 GT ./. chr3 11606170 . C . . LowGQX END=11606502 GT ./. chr3 11610030 . G . . LowGQX END=11610130 GT ./. chr3 11623717 . A . . LowGQX END=11623817 GT ./. chr3 11643235 . C . . LowGQX END=11643499 GT ./. chr3 11667807 . A . . LowGQX END=11667907 GT ./. chr3 11684902 . G . . LowGQX END=11685002 GT ./. chr3 11712735 . C . . LowGQX END=11712869 GT ./. chr3 11734514 . T . . LowGQX END=11734674 GT ./. chr3 11744427 . A . . LowGQX END=11744527 GT ./. chr3 11831917 . T . . LowGQX END=11832068 GT ./. chr3 11848884 . C . . LowGQX END=11849370 GT ./. chr3 11850959 . G . . LowGQX END=11851159 GT ./. chr3 11858648 . T . . LowGQX END=11858814 GT ./. chr3 11871186 . A . . LowGQX END=11871341 GT ./. chr3 11874555 . G . . LowGQX END=11874655 GT ./. chr3 11880693 . C . . LowGQX END=11880793 GT ./. chr3 11885501 . A . . LowGQX END=11885688 GT ./. chr3 11886365 . T . . LowGQX END=11886571 GT ./. chr3 11887974 . A . . LowGQX END=11888113 GT ./. chr3 12046014 . C . . LowGQX END=12046434 GT ./. chr3 12182130 . T . . LowGQX END=12182230 GT ./. chr3 12183401 . C . . LowGQX END=12183501 GT ./. chr3 12187178 . G . . LowGQX END=12187336 GT ./. chr3 12192732 . T . . LowGQX END=12192832 GT ./. chr3 12195013 . T . . LowGQX END=12195215 GT ./. chr3 12195825 . A . . LowGQX END=12195954 GT ./. chr3 12198318 . A . . LowGQX END=12198437 GT ./. chr3 12198883 . A . . LowGQX END=12198985 GT ./. chr3 12200169 . C . . LowGQX END=12200343 GT ./. chr3 12203027 . A . . LowGQX END=12203127 GT ./. chr3 12203511 . G . . LowGQX END=12203655 GT ./. chr3 12208721 . G . . LowGQX END=12208821 GT ./. chr3 12209875 . G . . LowGQX END=12209979 GT ./. chr3 12211256 . G . . LowGQX END=12211407 GT ./. chr3 12224811 . G . . LowGQX END=12224981 GT ./. chr3 12228868 . G . . LowGQX END=12229113 GT ./. chr3 12231949 . A . . LowGQX END=12232126 GT ./. chr3 12393041 . T . . LowGQX END=12393225 GT ./. chr3 12413319 . G . . LowGQX END=12413419 GT ./. chr3 12413553 . A . . LowGQX END=12413653 GT ./. chr3 12421152 . T . . LowGQX END=12421482 GT ./. chr3 12422770 . T . . LowGQX END=12423042 GT ./. chr3 12434062 . T . . LowGQX END=12434303 GT ./. chr3 12440809 . T . . LowGQX END=12440909 GT ./. chr3 12447330 . C . . LowGQX END=12447664 GT ./. chr3 12458152 . T . . LowGQX END=12458705 GT ./. chr3 12475346 . A . . LowGQX END=12475696 GT ./. chr3 12531249 . C . . LowGQX END=12531540 GT ./. chr3 12533584 . A . . LowGQX END=12533768 GT ./. chr3 12537955 . T . . LowGQX END=12538105 GT ./. chr3 12544710 . T . . LowGQX END=12545335 GT ./. chr3 12546602 . A . . LowGQX END=12546782 GT ./. chr3 12558055 . T . . LowGQX END=12558212 GT ./. chr3 12560507 . G . . LowGQX END=12560748 GT ./. chr3 12570336 . C . . LowGQX END=12570475 GT ./. chr3 12571210 . A . . LowGQX END=12571412 GT ./. chr3 12573018 . T . . LowGQX END=12573210 GT ./. chr3 12574110 . T . . LowGQX END=12574272 GT ./. chr3 12580589 . T . . LowGQX END=12580939 GT ./. chr3 12581691 . C . . LowGQX END=12581933 GT ./. chr3 12583358 . C . . LowGQX END=12583522 GT ./. chr3 12584654 . T . . LowGQX END=12584754 GT ./. chr3 12586745 . C . . LowGQX END=12586964 GT ./. chr3 12598613 . G . . LowGQX END=12598713 GT ./. chr3 12610372 . A . . LowGQX END=12610505 GT ./. chr3 12611568 . A . . LowGQX END=12611754 GT ./. chr3 12613566 . A . . LowGQX END=12613875 GT ./. chr3 12616289 . A . . LowGQX END=12616508 GT ./. chr3 12618128 . A . . LowGQX END=12618243 GT ./. chr3 12623305 . A . . LowGQX END=12623454 GT ./. chr3 12623613 . A . . LowGQX END=12623755 GT ./. chr3 12625962 . C . . LowGQX END=12626208 GT ./. chr3 12626295 . T . . LowGQX END=12626532 GT ./. chr3 12626570 . A . . LowGQX END=12626804 GT ./. chr3 12627129 . C . . LowGQX END=12627350 GT ./. chr3 12629039 . T . . LowGQX END=12629188 GT ./. chr3 12632246 . G . . LowGQX END=12632525 GT ./. chr3 12633156 . A . . LowGQX END=12633343 GT ./. chr3 12641139 . T . . LowGQX END=12641359 GT ./. chr3 12641600 . G . . LowGQX END=12641830 GT ./. chr3 12641836 . C . . LowGQX END=12641966 GT ./. chr3 12644957 . G . . LowGQX END=12645057 GT ./. chr3 12645584 . A . . LowGQX END=12645840 GT ./. chr3 12647649 . C . . LowGQX END=12647850 GT ./. chr3 12650214 . T . . LowGQX END=12650474 GT ./. chr3 12650681 . T . . LowGQX END=12650886 GT ./. chr3 12653398 . C . . LowGQX END=12653613 GT ./. chr3 12659963 . G . . LowGQX END=12660272 GT ./. chr3 12776233 . C . . LowGQX END=12776333 GT ./. chr3 12776982 . G . . LowGQX END=12777136 GT ./. chr3 12778065 . G . . LowGQX END=12778165 GT ./. chr3 12778249 . G . . LowGQX END=12778349 GT ./. chr3 12779180 . C . . LowGQX END=12779334 GT ./. chr3 12779602 . C . . LowGQX END=12779702 GT ./. chr3 12780020 . C . . LowGQX END=12780120 GT ./. chr3 12783934 . C . . LowGQX END=12784034 GT ./. chr3 12785394 . C . . LowGQX END=12785494 GT ./. chr3 12790152 . A . . LowGQX END=12790294 GT ./. chr3 12791249 . G . . LowGQX END=12791349 GT ./. chr3 12810720 . C . . LowGQX END=12810820 GT ./. chr3 12838204 . G . . LowGQX END=12838304 GT ./. chr3 12844985 . A . . LowGQX END=12845133 GT ./. chr3 12848804 . G . . LowGQX END=12848960 GT ./. chr3 12849708 . G . . LowGQX END=12849833 GT ./. chr3 12851417 . T . . LowGQX END=12851535 GT ./. chr3 12851556 . A . . LowGQX END=12851826 GT ./. chr3 12854487 . A . . LowGQX END=12854597 GT ./. chr3 12854743 . A . . LowGQX END=12854890 GT ./. chr3 12856638 . A . . LowGQX END=12856935 GT ./. chr3 12857364 . A . . LowGQX END=12857510 GT ./. chr3 12857871 . A . . LowGQX END=12859378 GT ./. chr3 12861583 . A . . LowGQX END=12861683 GT ./. chr3 12866968 . G . . LowGQX END=12867141 GT ./. chr3 12868937 . A . . LowGQX END=12869106 GT ./. chr3 12872911 . C . . LowGQX END=12873074 GT ./. chr3 12875252 . A . . LowGQX END=12875484 GT ./. chr3 12877591 . G . . LowGQX END=12877725 GT ./. chr3 12880846 . A . . LowGQX END=12881084 GT ./. chr3 12881639 . A . . LowGQX END=12881739 GT ./. chr3 12881811 . C . . LowGQX END=12881950 GT ./. chr3 12892157 . G . . LowGQX END=12892360 GT ./. chr3 12913196 . A . . LowGQX END=12913296 GT ./. chr3 12940862 . C . . LowGQX END=12940962 GT ./. chr3 12942348 . G . . LowGQX END=12943027 GT ./. chr3 12944248 . C . . LowGQX END=12944348 GT ./. chr3 12949847 . A . . LowGQX END=12950028 GT ./. chr3 12950771 . A . . LowGQX END=12950937 GT ./. chr3 12953127 . A . . LowGQX END=12953286 GT ./. chr3 12954926 . A . . LowGQX END=12955056 GT ./. chr3 12956569 . G . . LowGQX END=12956669 GT ./. chr3 12957092 . A . . LowGQX END=12957236 GT ./. chr3 12961928 . A . . LowGQX END=12962099 GT ./. chr3 12963618 . A . . LowGQX END=12963745 GT ./. chr3 12966079 . A . . LowGQX END=12966245 GT ./. chr3 12976946 . A . . LowGQX END=12977627 GT ./. chr3 12977628 . C . . LowGQX END=12977708;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:49 chr3 12977709 . T . . LowGQX END=12978200 GT ./. chr3 12983069 . A . . LowGQX END=12983368 GT ./. chr3 13008870 . C . . LowGQX END=13008970 GT ./. chr3 13028454 . T . . LowGQX END=13028554 GT ./. chr3 13114453 . G . . LowGQX END=13114553 GT ./. chr3 13359122 . C . . LowGQX END=13359284 GT ./. chr3 13360510 . C . . LowGQX END=13360664 GT ./. chr3 13360728 . A . . LowGQX END=13360828 GT ./. chr3 13361261 . A . . LowGQX END=13361482 GT ./. chr3 13363083 . A . . LowGQX END=13363338 GT ./. chr3 13363691 . A . . LowGQX END=13363772;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr3 13363773 . T . . LowGQX END=13363802 GT ./. chr3 13363803 . G . . LowGQX END=13363842;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2:3:60 chr3 13364807 . A . . LowGQX END=13364935;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1:3:60 chr3 13367293 . A . . LowGQX END=13367434 GT ./. chr3 13368715 . A . . LowGQX END=13368940 GT ./. chr3 13370269 . A . . LowGQX END=13370449 GT ./. chr3 13371958 . A . . LowGQX END=13372137 GT ./. chr3 13373789 . G . . LowGQX END=13373889 GT ./. chr3 13376952 . A . . LowGQX END=13377115 GT ./. chr3 13378285 . A . . LowGQX END=13378421 GT ./. chr3 13379275 . G . . LowGQX END=13379428 GT ./. chr3 13381352 . A . . LowGQX END=13381536 GT ./. chr3 13381718 . T . . LowGQX END=13381818 GT ./. chr3 13383246 . A . . LowGQX END=13383386 GT ./. chr3 13383494 . A . . LowGQX END=13383626 GT ./. chr3 13384673 . A . . LowGQX END=13384806 GT ./. chr3 13393310 . T . . LowGQX END=13393483 GT ./. chr3 13393578 . A . . LowGQX END=13393687 GT ./. chr3 13395052 . A . . LowGQX END=13395163 GT ./. chr3 13395413 . A . . LowGQX END=13395610 GT ./. chr3 13399720 . A . . LowGQX END=13399898 GT ./. chr3 13401768 . A . . LowGQX END=13401994 GT ./. chr3 13407444 . A . . LowGQX END=13407594 GT ./. chr3 13413332 . A . . LowGQX END=13413535 GT ./. chr3 13415216 . A . . LowGQX END=13415376 GT ./. chr3 13417002 . A . . LowGQX END=13417144 GT ./. chr3 13417789 . G . . LowGQX END=13417934 GT ./. chr3 13418954 . A . . LowGQX END=13419065 GT ./. chr3 13420397 . G . . LowGQX END=13420497 GT ./. chr3 13421031 . C . . LowGQX END=13421224 GT ./. chr3 13427773 . A . . LowGQX END=13427910 GT ./. chr3 13429801 . A . . LowGQX END=13429956 GT ./. chr3 13432709 . A . . LowGQX END=13432810 GT ./. chr3 13438815 . A . . LowGQX END=13438991 GT ./. chr3 13441183 . T . . LowGQX END=13441364 GT ./. chr3 13461537 . C . . LowGQX END=13461729 GT ./. chr3 13521739 . G . . LowGQX END=13521899 GT ./. chr3 13522195 . G . . LowGQX END=13522295 GT ./. chr3 13522744 . A . . LowGQX END=13522897 GT ./. chr3 13524962 . A . . LowGQX END=13525067 GT ./. chr3 13538234 . A . . LowGQX END=13538355 GT ./. chr3 13539925 . G . . LowGQX END=13540085 GT ./. chr3 13542142 . G . . LowGQX END=13542302 GT ./. chr3 13543115 . C . . LowGQX END=13543215 GT ./. chr3 13543353 . C . . LowGQX END=13543453 GT ./. chr3 13544382 . A . . LowGQX END=13544483 GT ./. chr3 13545592 . A . . LowGQX END=13545775 GT ./. chr3 13545966 . A . . LowGQX END=13546186 GT ./. chr3 13573879 . T . . LowGQX END=13574039 GT ./. chr3 13611814 . G . . PASS END=13611832;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2842:99:60 chr3 13611833 . A . . PASS END=13611844;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:2592:99:60 chr3 13611845 . T . . PASS END=13611854;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1808:99:60 chr3 13611855 . C . . PASS END=13611865;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:1089:99:60 chr3 13611866 . T . . PASS END=13611872;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:830:99:60 chr3 13611873 . G T 4867.92 PASS DP=189;Dels=0.00;FS=0.000;HRun=0;HaplotypeScore=3.8994;MQ=60;MQ0=0;QD=25.76;SB=-2420.29;TI=NM_001998,NM_001004019,NM_001165035;GI=FBLN2,FBLN2,FBLN2;FC=Missense_E6D,Missense_E6D,Missense_E6D;EXON GT:AD:DP:GQ:PL:MQ:GQX:VF 1/1:0,187:189:99:4868,361,0:60:99:1.000 chr3 13611874 . C . . PASS END=13611875;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:129:99:60 chr3 13611876 . T . . PASS END=13611878;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:70:99:60 chr3 13611879 . A . . PASS END=13611880;BLOCKAVG_min30p3a GT:DP:GQX:MQ 0/0:20:39:60 chr3 13611881 . G . . LowGQX END=13613162 GT ./. chr3 13649561 . G . . LowGQX END=13649674 GT ./. chr3 13651012 . G . . LowGQX END=13651182 GT ./. chr3 13655483 . G . . LowGQX END=13655665 GT ./. chr3 13659575 . G . . LowGQX END=13659786 GT ./. chr3 13660403 . G . . LowGQX END=13660518 GT ./. chr3 13661179 . G . . LowGQX END=13661332 GT ./. chr3 13663274 . G . . LowGQX END=13663416 GT ./. chr3 13667944 . G . . LowGQX END=13668080 GT ./. chr3 13669331 . G . . LowGQX END=13669470 GT ./. chr3 13670404 . G . . LowGQX END=13670584 GT ./. chr3 13670663 . G . . LowGQX END=13670793 GT ./. chr3 13671319 . G . . LowGQX END=13671489 GT ./. chr3 13672198 . G . . LowGQX END=13672316 GT ./. chr3 13672828 . G . . LowGQX END=13672958 GT ./. chr3 13677944 . G . . LowGQX END=13678069 GT ./. chr3 13679061 . G . . LowGQX END=13679420 GT ./. chr3 13679586 . T . . LowGQX END=13679807 GT ./. chr3 13860390 . A . . LowGQX END=13860972 GT ./. chr3 13895978 . T . . LowGQX END=13896352 GT ./. chr3 13916393 . G . . LowGQX END=13916722 GT ./. chr3 13921188 . C . . LowGQX END=13921365 GT ./. chr3 14105538 . A . . LowGQX END=14106436 GT ./. chr3 14154385 . C . . LowGQX END=14154697 GT ./. chr3 14157924 . A . . LowGQX END=14158027 GT ./. chr3 14163338 . T . . LowGQX END=14163599 GT ./. chr3 14166056 . T . . LowGQX END=14166216 GT ./. chr3 14166560 . T . . LowGQX END=14166757 GT ./. chr3 14170355 . C . . LowGQX END=14170541 GT ./. chr3 14170861 . A . . LowGQX END=14171113 GT ./. chr3 14172271 . A . . LowGQX END=14172508 GT ./. chr3 14173029 . T . . LowGQX END=14173226 GT ./. chr3 14173995 . C . . LowGQX END=14174147 GT ./. chr3 14174315 . G . . LowGQX END=14174487 GT ./. chr3 14175188 . G . . LowGQX END=14175361 GT ./. chr3 14176219 . T . . LowGQX END=14176443 GT ./. chr3 14176605 . G . . LowGQX END=14176784 GT ./. chr3 14177256 . C . . LowGQX END=14177507 GT ./. chr3 14180629 . G . . LowGQX END=14180849 GT ./. chr3 14183042 . C . . LowGQX END=14183347 GT ./. chr3 14186647 . T . . LowGQX END=14187660 GT ./. chr3 14188745 . A . . LowGQX END=14188905 GT ./. chr3 14189385 . C . . LowGQX END=14189502 GT ./. chr3 14190061 . C . . LowGQX END=14190232 GT ./. chr3 14190313 . C . . LowGQX END=14190449 GT ./. chr3 14193774 . C . . LowGQX END=14193926 GT ./. chr3 14197834 . C . . LowGQX END=14198054 GT ./. chr3 14199510 . C . . LowGQX END=14200399 GT ./. chr3 14201196 . T . . LowGQX END=14201356 GT ./. chr3 14206262 . T . . LowGQX END=14206434 GT ./. chr3 14206927 . C . . LowGQX END=14207086 GT ./. chr3 14208668 . C . . LowGQX END=14208781 GT ./. chr3 14209756 . C . . LowGQX END=14209936 GT ./. chr3 14211914 . T . . LowGQX END=14212051 GT ./. chr3 14214366 . C . . LowGQX END=14214563 GT ./. chr3 14219965 . C . . LowGQX END=14220173 GT ./. chr3 14220322 . G . . LowGQX END=14220422 GT ./. chr3 14223058 . A . . LowGQX END=14223173 GT ./. chr3 14225435 . A . . LowGQX END=14225535 GT ./. chr3 14239527 . C . . LowGQX END=14239627 GT ./. chr3 14485141 . A . . LowGQX END=14485491 GT ./. chr3 14486246 . G . . LowGQX END=14486353 GT ./. chr3 14487223 . A . . LowGQX END=14487362 GT ./. chr3 14489088 . A . . LowGQX END=14489329 GT ./. chr3 14499456 . A . . LowGQX END=14499593 GT ./. chr3 14508022 . A . . LowGQX END=14508161 GT ./. chr3 14509359 . A . . LowGQX END=14509467 GT ./. chr3 14509544 . T . . LowGQX END=14509723 GT ./. chr3 14513711 . A . . LowGQX END=14513828 GT ./. chr3 14518711 . A . . LowGQX END=14518853 GT ./. chr3 14519972 . A . . LowGQX END=14520079 GT ./. chr3 14520591 . A . . LowGQX END=14520696 GT ./. chr3 14523177 . A . . LowGQX END=14523352 GT ./. chr3 14526373 . A . . LowGQX END=14526518 GT ./. chr3 14535172 . T . . LowGQX END=14535335 GT ./. chr3 14536350 . C . . LowGQX END=14536498 GT ./. chr3 14537924 . C . . LowGQX END=14538069 GT ./. chr3 14545073 . C . . LowGQX END=14545180 GT ./. chr3 14547111 . C . . LowGQX END=14547298 GT ./. chr3 14548308 . C . . LowGQX END=14548489 GT ./. chr3 14549068 . C . . LowGQX END=14549209 GT ./. chr3 14551327 . C . . LowGQX END=14551473 GT ./. chr3 14552672 . C . . LowGQX END=14552819 GT ./. chr3 14552904 . T . . LowGQX END=14553004 GT ./. chr3 14554275 . G . . LowGQX END=14554375 GT ./. chr3 14555172 . C . . LowGQX END=14555319 GT ./. chr3 14555799 . C . . LowGQX END=14555987 GT ./. chr3 14558571 . C . . LowGQX END=14558722 GT ./. chr3 14559238 . G . . LowGQX END=14559406 GT ./. chr3 14561614 . C . . LowGQX END=14561787 GT ./. chr3 14561896 . C . . LowGQX END=14562045 GT ./. chr3 14563148 . C . . LowGQX END=14563295 GT ./. chr3 14564435 . C . . LowGQX END=14564595 GT ./. chr3 14565109 . T . . LowGQX END=14565209 GT ./. chr3 14565899 . C . . LowGQX END=14566046 GT ./. chr3 14566943 . C . . LowGQX END=14567080 GT ./. chr3 14567357 . C . . LowGQX END=14567486 GT ./. chr3 14581775 . C . . LowGQX END=14581898 GT ./. chr3 14583379 . C . . LowGQX END=14583589 GT ./. chr3 14693315 . T . . LowGQX END=14693415 GT ./. chr3 14695871 . T . . LowGQX END=14696040 GT ./. chr3 14697034 . A . . LowGQX END=14697139 GT ./. chr3 14700306 . C . . LowGQX END=14700458 GT ./. chr3 14703035 . A . . LowGQX END=14703217 GT ./. chr3 14706533 . A . . LowGQX END=14706633 GT ./. chr3 14708310 . A . . LowGQX END=14708496 GT ./. chr3 14708929 . A . . LowGQX END=14709029 GT ./. chr3 14709554 . A . . LowGQX END=14709691 GT ./. chr3 14711398 . T . . LowGQX END=14711629 GT ./. chr3 14712401 . A . . LowGQX END=14712704 GT ./. chr3 14724219 . T . . LowGQX END=14724707 GT ./. chr3 14725747 . A . . LowGQX END=14725892 GT ./. chr3 14731502 . A . . LowGQX END=14731626 GT ./. chr3 14744635 . A . . LowGQX END=14744772 GT ./. chr3 14745842 . A . . LowGQX END=14746128 GT ./. chr3 14755512 . A . . LowGQX END=14755702 GT ./. chr3 14756794 . A . . LowGQX END=14756919 GT ./. chr3 14763158 . A . . LowGQX END=14763294 GT ./. chr3 14763991 . T . . LowGQX END=14764091 GT ./. chr3 14768406 . A . . LowGQX END=14768534 GT ./. chr3 14769944 . A . . LowGQX END=14770198 GT ./. chr3 14798876 . A . . LowGQX END=14799184 GT ./. chr3 14801396 . A . . LowGQX END=14801508 GT ./. chr3 14802978 . A . . LowGQX END=14803125 GT ./. chr3 14813572 . A . . LowGQX END=14813713 GT ./. chr3 14814291 . T . . LowGQX END=14814391 GT ./. chr3 14860578 . C . . LowGQX END=14863104 GT ./. chr3 14905634 . G . . LowGQX END=14905768 GT ./. chr3 14922058 . T . . LowGQX END=14922158 GT ./. chr3 14922214 . G . . LowGQX END=14922314 GT ./. chr3 14938985 . C . . LowGQX END=14939177 GT ./. chr3 14939445 . G . . LowGQX END=14939603 GT ./. chr3 14940240 . G . . LowGQX END=14940340 GT ./. chr3 14941885 . C . . LowGQX END=14941985 GT ./. chr3 14942489 . C . . LowGQX END=14942589 GT ./. chr3 14949133 . A . . LowGQX END=14949233 GT ./. chr3 14952352 . G . . LowGQX END=14952452 GT ./. chr3 14958748 . C . . LowGQX END=14958848 GT ./. chr3 14960251 . G . . LowGQX END=14960351 GT ./. chr3 14963424 . G . . LowGQX END=14963525 GT ./. chr3 14963917 . G . . LowGQX END=14964056 GT ./. chr3 14964552 . G . . LowGQX END=14964683 GT ./. chr3 14965514 . G . . LowGQX END=14965646 GT ./. chr3 14967576 . G . . LowGQX END=14967706 GT ./. chr3 14974083 . G . . LowGQX END=14974239 GT ./. chr3 14974606 . A . . LowGQX END=14974706 GT ./. chr3 15045349 . C . . LowGQX END=15045508 GT ./. chr3 15046043 . A . . LowGQX END=15046143 GT ./. chr3 15055094 . A . . LowGQX END=15055299 GT ./. chr3 15057657 . A . . LowGQX END=15057764 GT ./. chr3 15062258 . A . . LowGQX END=15062443 GT ./. chr3 15064705 . A . . LowGQX END=15064857 GT ./. chr3 15065560 . G . . LowGQX END=15065719 GT ./. chr3 15070091 . A . . LowGQX END=15070229 GT ./. chr3 15071740 . C . . LowGQX END=15071962 GT ./. chr3 15073884 . A . . LowGQX END=15074010 GT ./. chr3 15076160 . C . . LowGQX END=15076319 GT ./. chr3 15079505 . A . . LowGQX END=15079647 GT ./. chr3 15080627 . A . . LowGQX END=15080737 GT ./. chr3 15084339 . A . . LowGQX END=15084518 GT ./. chr3 15091278 . G . . LowGQX END=15091493 GT ./. chr3 15093946 . C . . LowGQX END=15094143 GT ./. chr3 15094868 . G . . LowGQX END=15095076 GT ./. chr3 15100874 . A . . LowGQX END=15100985 GT ./. chr3 15106526 . T . . LowGQX END=15106704 GT ./. chr3 15115287 . G . . LowGQX END=15116440 GT ./. chr3 15116862 . G . . LowGQX END=15116962 GT ./. chr3 15117111 . A . . LowGQX END=15117220 GT ./. chr3 15118567 . A . . LowGQX END=15118674 GT ./. chr3 15119576 . C . . LowGQX END=15119676 GT ./. chr3 15122225 . G . . LowGQX END=15122325 GT ./. chr3 15123872 . A . . LowGQX END=15124118 GT ./. chr3 15126240 . A . . LowGQX END=15126406 GT ./. chr3 15126480 . T . . LowGQX END=15126580 GT ./. chr3 15127366 . A . . LowGQX END=15127471 GT ./. chr3 15131904 . A . . LowGQX END=15132049 GT ./. chr3 15132943 . C . . LowGQX END=15133043 GT ./. chr3 15137360 . G . . LowGQX END=15137630 GT ./. chr3 15216377 . T . . LowGQX END=15216859 GT ./. chr3 15219092 . C . . LowGQX END=15219695 GT ./. chr3 15222383 . A . . LowGQX END=15222483 GT ./. chr3 15247944 . G . . LowGQX END=15248107 GT ./. chr3 15252262 . C . . LowGQX END=15252362 GT ./. chr3 15253609 . A . . LowGQX END=15253722 GT ./. chr3 15258930 . A . . LowGQX END=15259092 GT ./. chr3 15259964 . C . . LowGQX END=15260064 GT ./. chr3 15262286 . A . . LowGQX END=15262491 GT ./. chr3 15264916 . G . . LowGQX END=15265076 GT ./. chr3 15269344 . A . . LowGQX END=15269475 GT ./. chr3 15270474 . T . . LowGQX END=15270574 GT ./. chr3 15271946 . A . . LowGQX END=15272046 GT ./. chr3 15273592 . T . . LowGQX END=15273692 GT ./. chr3 15274024 . A . . LowGQX END=15274175 GT ./. chr3 15275322 . T . . LowGQX END=15275483 GT ./. chr3 15276530 . A . . LowGQX END=15276655 GT ./. chr3 15281938 . G . . LowGQX END=15282127 GT ./. chr3 15282259 . A . . LowGQX END=15282363 GT ./. chr3 15282958 . A . . LowGQX END=15283098 GT ./. chr3 15283613 . A . . LowGQX END=15283773 GT ./. chr3 15287031 . A . . LowGQX END=15287181 GT ./. chr3 15288161 . T . . LowGQX END=15288377 GT ./. chr3 15288832 . A . . LowGQX END=15288967 GT ./. chr3 15292435 . T . . LowGQX END=15292535 GT ./. chr3 15292621 . A . . LowGQX END=15292770 GT ./. chr3 15297591 . A . . LowGQX END=15297813 GT ./. chr3 15298358 . A . . LowGQX END=15298623 GT ./. chr3 15300336 . A . . LowGQX END=15300560 GT ./. chr3 15301180 . G . . LowGQX END=15301340 GT ./. chr3 15303664 . A . . LowGQX END=15303799 GT ./. chr3 15311218 . A . . LowGQX END=15311387 GT ./. chr3 15345608 . A . . LowGQX END=15345741 GT ./. chr3 15345754 . A . . LowGQX END=15345854 GT ./. chr3 15371933 . A . . LowGQX END=15372093 GT ./. chr3 15373736 . C . . LowGQX END=15373918 GT ./. chr3 15425568 . A . . LowGQX END=15425728 GT ./. chr3 15452761 . G . . LowGQX END=15452947 GT ./. chr3 15455317 . C . . LowGQX END=15455453 GT ./. chr3 15455526 . A . . LowGQX END=15455672 GT ./. chr3 15456264 . T . . LowGQX END=15456422 GT ./. chr3 15456998 . C . . LowGQX END=15457098 GT ./. chr3 15457277 . A . . LowGQX END=15457452 GT ./. chr3 15466420 . A . . LowGQX END=15466599 GT ./. chr3 15467792 . A . . LowGQX END=15468021 GT ./. chr3 15469229 . C . . LowGQX END=15469392 GT ./. chr3 15471358 . G . . LowGQX END=15471518 GT ./. chr3 15473592 . A . . LowGQX END=15473733 GT ./. chr3 15475853 . A . . LowGQX END=15476048 GT ./. chr3 15477847 . A . . LowGQX END=15478085 GT ./. chr3 15480590 . T . . LowGQX END=15480690 GT ./. chr3 15493043 . T . . LowGQX END=15493272 GT ./. chr3 15495285 . A . . LowGQX END=15495490 GT ./. chr3 15497354 . C . . LowGQX END=15497578 GT ./. chr3 15497916 . C . . LowGQX END=15498138 GT ./. chr3 15499642 . G . . LowGQX END=15499884 GT ./. chr3 15507797 . A . . LowGQX END=15507996 GT ./. chr3 15509274 . C . . LowGQX END=15509473 GT ./. chr3 15511992 . C . . LowGQX END=15512189 GT ./. chr3 15515445 . T . . LowGQX END=15515594 GT ./. chr3 15515642 . C . . LowGQX END=15515831 GT ./. chr3 15516381 . A . . LowGQX END=15516510 GT ./. chr3 15516881 . C . . LowGQX END=15517046 GT ./. chr3 15518582 . C . . LowGQX END=15518756 GT ./. chr3 15520407 . C . . LowGQX END=15520562 GT ./. chr3 15520794 . C . . LowGQX END=15520941 GT ./. chr3 15529662 . T . . LowGQX END=15529866 GT ./. chr3 15530981 . G . . LowGQX END=15531196 GT ./. chr3 15539997 . C . . LowGQX END=15540157 GT ./. chr3 15562976 . C . . LowGQX END=15563184 GT ./. chr3 15602280 . A . . LowGQX END=15602439 GT ./. chr3 15604863 . A . . LowGQX END=15605054 GT ./. chr3 15606006 . G . . LowGQX END=15606168 GT ./. chr3 15609349 . A . . LowGQX END=15609512 GT ./. chr3 15609937 . A . . LowGQX END=15610096 GT ./. chr3 15613123 . A . . LowGQX END=15613279 GT ./. chr3 15614658 . G . . LowGQX END=15614758 GT ./. chr3 15616482 . A . . LowGQX END=15616592 GT ./. chr3 15621407 . T . . LowGQX END=15621587 GT ./. chr3 15624382 . A . . LowGQX END=15624499 GT ./. chr3 15626753 . A . . LowGQX END=15626853 GT ./. chr3 15627970 . A . . LowGQX END=15628121 GT ./. chr3 15631034 . T . . LowGQX END=15631134 GT ./. chr3 15633098 . T . . LowGQX END=15633198 GT ./. chr3 15637862 . T . . LowGQX END=15637962 GT ./. chr3 15642595 . A . . LowGQX END=15642704 GT ./. chr3 15642888 . A . . LowGQX END=15643104 GT ./. chr3 15643203 . T . . LowGQX END=15643453 GT ./. chr3 15672928 . T . . LowGQX END=15673028 GT ./. chr3 15676880 . T . . LowGQX END=15677247 GT ./. chr3 15683364 . G . . LowGQX END=15683616 GT ./. chr3 15685772 . G . . LowGQX END=15687047 GT ./. chr3 15711776 . C . . LowGQX END=15712064 GT ./. chr3 15717404 . C . . LowGQX END=15717520 GT ./. chr3 15718472 . A . . LowGQX END=15718572 GT ./. chr3 15718978 . T . . LowGQX END=15719078 GT ./. chr3 15719715 . C . . LowGQX END=15719862 GT ./. chr3 15720800 . A . . LowGQX END=15720900 GT ./. chr3 15720977 . A . . LowGQX END=15721077 GT ./. chr3 15726732 . C . . LowGQX END=15726953 GT ./. chr3 15727508 . C . . LowGQX END=15727627 GT ./. chr3 15727723 . A . . LowGQX END=15727823 GT ./. chr3 15731525 . C . . LowGQX END=15731728 GT ./. chr3 15736233 . A . . LowGQX END=15736333 GT ./. chr3 15736658 . A . . LowGQX END=15736758 GT ./. chr3 15737590 . A . . LowGQX END=15737753 GT ./. chr3 15749430 . C . . LowGQX END=15749572 GT ./. chr3 15751159 . C . . LowGQX END=15751259 GT ./. chr3 15752700 . A . . LowGQX END=15752800 GT ./. chr3 15753638 . T . . LowGQX END=15753738 GT ./. chr3 15754983 . T . . LowGQX END=15755149 GT ./. chr3 15756014 . T . . LowGQX END=15756174 GT ./. chr3 15762421 . C . . LowGQX END=15762635 GT ./. chr3 15765888 . C . . LowGQX END=15766032 GT ./. chr3 15776911 . A . . LowGQX END=15777011 GT ./. chr3 15778539 . C . . LowGQX END=15778741 GT ./. chr3 15793186 . G . . LowGQX END=15793342 GT ./. chr3 15807730 . G . . LowGQX END=15807830 GT ./. chr3 15836722 . T . . LowGQX END=15836822 GT ./. chr3 15837902 . C . . LowGQX END=15838029 GT ./. chr3 15855760 . C . . LowGQX END=15855860 GT ./. chr3 15900787 . C . . LowGQX END=15900947 GT ./. chr3 15915268 . T . . LowGQX END=15915368 GT ./. chr3 16216657 . A . . LowGQX END=16217200 GT ./. chr3 16237265 . A . . LowGQX END=16237465 GT ./. chr3 16242124 . A . . LowGQX END=16242333 GT ./. chr3 16250008 . A . . LowGQX END=16250180 GT ./. chr3 16252629 . A . . LowGQX END=16252751 GT ./. chr3 16254074 . A . . LowGQX END=16254273 GT ./. chr3 16260908 . A . . LowGQX END=16261044 GT ./. chr3 16261415 . A . . LowGQX END=16261524 GT ./. chr3 16264120 . A . . LowGQX END=16264268 GT ./. chr3 16268859 . A . . LowGQX END=16269090 GT ./. chr3 16273290 . T . . LowGQX END=16273390 GT ./. chr3 16302254 . G . . LowGQX END=16302354 GT ./. chr3 16305650 . T . . LowGQX END=16305750 GT ./. chr3 16306274 . A . . LowGQX END=16306386 GT ./. chr3 16310718 . C . . LowGQX END=16310818 GT ./. chr3 16312435 . G . . LowGQX END=16312581 GT ./. chr3 16313094 . T . . LowGQX END=16313248 GT ./. chr3 16313617 . A . . LowGQX END=16313717 GT ./. chr3 16327847 . A . . LowGQX END=16327958 GT ./. chr3 16336361 . A . . LowGQX END=16336507 GT ./. chr3 16343131 . A . . LowGQX END=16343378 GT ./. chr3 16344145 . A . . LowGQX END=16344305 GT ./. chr3 16344913 . A . . LowGQX END=16345072 GT ./. chr3 16358323 . A . . LowGQX END=16358743 GT ./. chr3 16364874 . G . . LowGQX END=16364974 GT ./. chr3 16368278 . A . . LowGQX END=16368386 GT ./. chr3 16399437 . A . . LowGQX END=16399557 GT ./. chr3 16411581 . A . . LowGQX END=16411789 GT ./. chr3 16419223 . A . . LowGQX END=16419612 GT ./. chr3 16450880 . A . . LowGQX END=16450993 GT ./. chr3 16457660 . A . . LowGQX END=16457760 GT ./. chr3 16475336 . C . . LowGQX END=16475547 GT ./. chr3 16524161 . G . . LowGQX END=16524321 GT ./. chr3 16535230 . A . . LowGQX END=16535379 GT ./. chr3 16630116 . C . . LowGQX END=16630272 GT ./. chr3 16633506 . T . . LowGQX END=16633707 GT ./. chr3 16635111 . A . . LowGQX END=16635327 GT ./. chr3 16635989 . A . . LowGQX END=16636142 GT ./. chr3 16636770 . A . . LowGQX END=16636944 GT ./. chr3 16638206 . G . . LowGQX END=16638610 GT ./. chr3 16638946 . C . . LowGQX END=16639100 GT ./. chr3 16639543 . T . . LowGQX END=16639737 GT ./. chr3 16639908 . C . . LowGQX END=16640157 GT ./. chr3 16645888 . A . . LowGQX END=16646010 GT ./. chr3 16646631 . T . . LowGQX END=16646764 GT ./. chr3 16679392 . C . . LowGQX END=16679509 GT ./. chr3 16926534 . C . . LowGQX END=16926866 GT ./. chr3 17051165 . G . . LowGQX END=17053655 GT ./. chr3 17056198 . A . . LowGQX END=17056406 GT ./. chr3 17077219 . A . . LowGQX END=17077319 GT ./. chr3 17084354 . T . . LowGQX END=17084454 GT ./. chr3 17109446 . A . . LowGQX END=17109560 GT ./. chr3 17122658 . T . . LowGQX END=17122758 GT ./. chr3 17131223 . A . . LowGQX END=17131407 GT ./. chr3 17202453 . G . . LowGQX END=17202751 GT ./. chr3 17208257 . A . . LowGQX END=17208423 GT ./. chr3 17209178 . C . . LowGQX END=17209331 GT ./. chr3 17226592 . T . . LowGQX END=17226703 GT ./. chr3 17255697 . A . . LowGQX END=17255887 GT ./. chr3 17275160 . T . . LowGQX END=17275260 GT ./. chr3 17279653 . A . . LowGQX END=17279914 GT ./. chr3 17299936 . T . . LowGQX END=17300091 GT ./. chr3 17333385 . A . . LowGQX END=17333496 GT ./. chr3 17349432 . T . . LowGQX END=17349629 GT ./. chr3 17413565 . A . . LowGQX END=17413742 GT ./. chr3 17415948 . T . . LowGQX END=17416048 GT ./. chr3 17416097 . A . . LowGQX END=17416197 GT ./. chr3 17418012 . C . . LowGQX END=17418112 GT ./. chr3 17425403 . A . . LowGQX END=17425510 GT ./. chr3 17444601 . G . . LowGQX END=17444757 GT ./. chr3 17446174 . G . . LowGQX END=17446274 GT ./. chr3 17446359 . C . . LowGQX END=17446459 GT ./. chr3 17447908 . A . . LowGQX END=17448042 GT ./. chr3 17469927 . G . . LowGQX END=17470027 GT ./. chr3 17549964 . A . . LowGQX END=17550065 GT ./. chr3 18004132 . C . . LowGQX END=18004232 GT ./. chr3 18055146 . G . . LowGQX END=18055267 GT ./. chr3 18058048 . C . . LowGQX END=18058207 GT ./. chr3 18082937 . T . . LowGQX END=18083037 GT ./. chr3 18308473 . A . . LowGQX END=18308573 GT ./. chr3 18390660 . T . . LowGQX END=18391177 GT ./. chr3 18392743 . C . . LowGQX END=18392903 GT ./. chr3 18393482 . A . . LowGQX END=18393690 GT ./. chr3 18419660 . A . . LowGQX END=18419850 GT ./. chr3 18427889 . A . . LowGQX END=18428106 GT ./. chr3 18435952 . A . . LowGQX END=18436411 GT ./. chr3 18438669 . A . . LowGQX END=18438785 GT ./. chr3 18456601 . A . . LowGQX END=18456729 GT ./. chr3 18457496 . C . . LowGQX END=18457628 GT ./. chr3 18458392 . A . . LowGQX END=18458592 GT ./. chr3 18459123 . T . . LowGQX END=18459223 GT ./. chr3 18462247 . A . . LowGQX END=18462462 GT ./. chr3 19190200 . C . . LowGQX END=19190300 GT ./. chr3 19295144 . A . . LowGQX END=19295382 GT ./. chr3 19322638 . A . . LowGQX END=19322824 GT ./. chr3 19384077 . A . . LowGQX END=19384209 GT ./. chr3 19388102 . C . . LowGQX END=19388202 GT ./. chr3 19389215 . A . . LowGQX END=19389460 GT ./. chr3 19431971 . A . . LowGQX END=19432133 GT ./. chr3 19436523 . A . . LowGQX END=19436853 GT ./. chr3 19479654 . A . . LowGQX END=19479856 GT ./. chr3 19490412 . T . . LowGQX END=19490512 GT ./. chr3 19491596 . A . . LowGQX END=19491852 GT ./. chr3 19492645 . A . . LowGQX END=19492899 GT ./. chr3 19498258 . A . . LowGQX END=19498477 GT ./. chr3 19551825 . A . . LowGQX END=19551925 GT ./. chr3 19554460 . A . . LowGQX E