SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

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SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
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Genes at Omim

NALCN, ZIC2,
NALCN Congenital contractures of the limbs and face, hypotonia, and developmental delay, 616266 (3)
Hypotonia, infantile, with psychomotor retardation and characteristic facies 1, 615419 (3)
ZIC2 Holoprosencephaly 5, 609637 (3)

Genes at Clinical Genomics Database

NALCN, ZIC2,
NALCN Congenital contractures of the limbs and face, hypotonia, and developmental delay
Hypotonia, infantile, with psychomotor retardation and characteristic facies 1
ZIC2 Holoprosencephaly 5

Genes at HGMD

Summary

Number of Variants: 945
Number of Genes: 6

Export to: CSV

MYCBP2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View dados_brutos_saude 13 . 77642738 345.77 A G PASS 0/1 62 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.00 0.37 None None None None None None MYCBP2|0.667579029|9.45%

N4BP2L2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View dados_brutos_saude 13 . 33016713 4747.77 T C PASS 1/1 153 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.28 0.00 None None None None None None N4BP2L2|0.017667921|75.5%

NALCN

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View dados_brutos_saude 13 . 101714392 883.77 C T PASS 0/1 90 STOP_GAINED HIGH NONSENSE None None None None None None NALCN|0.347978154|24.28%

SPATA13

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View dados_brutos_saude 13 . 24845038 819.77 A G PASS 1/1 28 None None None 0.06 0.97 None None None None None None SPATA13|0.057968423|60.4%

TUBA3C

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View dados_brutos_saude 13 . 19751485 1146.77 C G PASS 1/1 36 NON_SYNONYMOUS_CODING MODERATE MISSENSE 0.01 0.70 None None None None None None TUBA3C|0.005354336|85.36%

ZIC2

Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View dados_brutos_saude 13 . 100637744 787.77 C A PASS 0/1 63 SYNONYMOUS_CODING LOW SILENT None None None None None None ZIC2|0.780891061|6.3%
View dados_brutos_saude 13 . 100635111 1815.77 T C PASS 0/1 167 SYNONYMOUS_CODING LOW None None None None None None ZIC2|0.780891061|6.3%
View dados_brutos_saude 13 . 100635086 1444.77 C T PASS 0/1 144 SYNONYMOUS_CODING LOW SILENT None None None None None None ZIC2|0.780891061|6.3%
Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View dados_brutos_saude 13 . 114015172 2735.77 A C PASS 1|1 72 None None None None None None None None None GRTP1|0.011459401|79.63%
View dados_brutos_saude 13 . 114015162 737.77 G C PASS 0|1 69 None None None None None None None None None GRTP1|0.011459401|79.63%
View dados_brutos_saude 13 . 114013117 910.77 C T PASS 0/1 68 None None None None None None None None None GRTP1|0.011459401|79.63%
View dados_brutos_saude 13 . 114009476 875.77 C T PASS 0/1 51 None None None None None None None None None GRTP1|0.011459401|79.63%
View dados_brutos_saude 13 . 114009337 979.77 C T PASS 1/1 29 None None None None None None None None None GRTP1|0.011459401|79.63%
View dados_brutos_saude 13 . 114007650 1283.77 C T PASS 0/1 112 None None None None None None None None None GRTP1|0.011459401|79.63%
View dados_brutos_saude 13 . 113996503 1080.77 C T PASS 0/1 85 None None None None None None None None None GRTP1|0.011459401|79.63%
View dados_brutos_saude 13 . 113979298 799.77 G A PASS 0/1 50 None None None None None None None None None GRTP1|0.011459401|79.63%
View dados_brutos_saude 13 . 113839885 532.77 G A PASS 0/1 51 None None None None None None None None None PCID2|0.197759666|36.95%
View dados_brutos_saude 13 . 113828592 1986.77 C G PASS 0/1 161 None None None None None None None None None None
View dados_brutos_saude 13 . 113811945 703.77 T A PASS 1/1 23 None None None None None None None None None None
View dados_brutos_saude 13 . 113804867 2692.77 G A PASS 1|1 63 None None None None None None None None None None
View dados_brutos_saude 13 . 113804863 2513.77 A G PASS 1|1 55 None None None None None None None None None None
View dados_brutos_saude 13 . 113800943 3154.77 A G PASS 1|1 71 None None None None None None None None None F10|0.024231254|72.12%
View dados_brutos_saude 13 . 113800942 3154.77 C T PASS 1|1 72 None None None None None None None None None F10|0.024231254|72.12%
View dados_brutos_saude 13 . 113799443 1989.77 T C PASS 1/1 63 None None None None None None None None None F10|0.024231254|72.12%
View dados_brutos_saude 13 . 113669682 5086.77 T C PASS 1/1 156 None None None None None None None None None MCF2L|0.031326843|68.87%
View dados_brutos_saude 13 . 113667974 3060.77 A G PASS 1/1 96 None None None None None None None None None MCF2L|0.031326843|68.87%
View dados_brutos_saude 13 . 113654911 4112.77 G A PASS 1/1 133 None None None None None None None None None MCF2L|0.031326843|68.87%
View dados_brutos_saude 13 . 113548260 836.77 T C PASS 0/1 47 None None None None None None None None None None
View dados_brutos_saude 13 . 113547427 564.77 T C PASS 0/1 45 None None None None None None None None None None
View dados_brutos_saude 13 . 113520723 818.77 G A PASS 0/1 78 None None None None None None None None None ATP11A|0.13314168|45.42%
View dados_brutos_saude 13 . 113503531 569.77 G A PASS 0/1 124 None None None None None None None None None ATP11A|0.13314168|45.42%
View dados_brutos_saude 13 . 113496041 55.73 GGA G PASS 0/1 20 None None None None None None None None None ATP11A|0.13314168|45.42%
View dados_brutos_saude 13 . 113495792 1639.77 C T PASS 0/1 122 None None None None None None None None None ATP11A|0.13314168|45.42%
View dados_brutos_saude 13 . 113483792 267.77 G A PASS 0/1 17 None None None None None None None None None ATP11A|0.13314168|45.42%
View dados_brutos_saude 13 . 113433759 1420.77 G A PASS 0/1 143 None None None None None None None None None ATP11A|0.13314168|45.42%
View dados_brutos_saude 13 . 113429106 1071.73 A AAG PASS 0/1 71 None None None None None None None None None ATP11A|0.13314168|45.42%
View dados_brutos_saude 13 . 113363723 431.77 C A PASS 0/1 32 None None None None None None None None None ATP11A|0.13314168|45.42%
View dados_brutos_saude 13 . 113310861 3373.77 C A PASS 1/1 107 None None None None None None None None None ATP11AUN|0.000638266|97.63%
View dados_brutos_saude 13 . 113310687 64.73 AT A PASS 0/1 49 None None None None None None None None None ATP11AUN|0.000638266|97.63%
View dados_brutos_saude 13 . 113297407 141.9 C T PASS 1/1 5 None None None None None None None None None None
View dados_brutos_saude 13 . 113263453 1257.77 T C PASS 1/1 37 None None None None None None None None None None
View dados_brutos_saude 13 . 113235160 1359.77 C T PASS 1/1 46 None None None None None None None None None TUBGCP3|0.091754133|52.87%
View dados_brutos_saude 13 . 113233887 2253.77 T C PASS 1/1 71 None None None None None None None None None TUBGCP3|0.091754133|52.87%
View dados_brutos_saude 13 . 113200401 1802.77 C T PASS 1/1 55 None None None None None None None None None TUBGCP3|0.091754133|52.87%
View dados_brutos_saude 13 . 113164586 4173.77 A G PASS 1/1 133 None None None None None None None None None TUBGCP3|0.091754133|52.87%
View dados_brutos_saude 13 . 113164503 1868.77 T TC PASS 1/1 58 None None None None None None None None None TUBGCP3|0.091754133|52.87%
View dados_brutos_saude 13 . 113158648 4759.77 G A PASS 1/1 152 None None None None None None None None None TUBGCP3|0.091754133|52.87%
View dados_brutos_saude 13 . 113147529 1007.77 A G PASS 1/1 30 None None None None None None None None None TUBGCP3|0.091754133|52.87%
View dados_brutos_saude 13 . 113147423 3055.77 C T PASS 1/1 104 None None None None None None None None None TUBGCP3|0.091754133|52.87%
View dados_brutos_saude 13 . 113138579 154.77 C A PASS 0/1 20 None None None None None None None None None None
View dados_brutos_saude 13 . 113138440 869.77 T C PASS 1/1 27 None None None None None None None None None None
View dados_brutos_saude 13 . 113118845 1697.77 G A PASS 0/1 131 None None None None None None None None None None
View dados_brutos_saude 13 . 113118393 1671.77 G A PASS 0/1 122 None None None None None None None None None None
View dados_brutos_saude 13 . 113115754 2538.77 C T PASS 0/1 207 None None None None None None None None None None
View dados_brutos_saude 13 . 113110921 692.77 G A PASS 0/1 54 None None None None None None None None None None
View dados_brutos_saude 13 . 113089825 837.77 G A PASS 0/1 80 None None None None None None None None None None
View dados_brutos_saude 13 . 113088281 880.77 C T PASS 0/1 56 None None None None None None None None None SPACA7|0.000422564|98.83%
View dados_brutos_saude 13 . 113087276 1493.77 G A PASS 0/1 111 None None None None None None None None None SPACA7|0.000422564|98.83%
View dados_brutos_saude 13 . 113086288 832.77 G A PASS 0/1 72 None None None None None None None None None SPACA7|0.000422564|98.83%
View dados_brutos_saude 13 . 113074467 1620.77 G A PASS 0/1 143 None None None None None None None None None SPACA7|0.000422564|98.83%
View dados_brutos_saude 13 . 113070195 262.77 C T PASS 0/1 34 None None None None None None None None None SPACA7|0.000422564|98.83%
View dados_brutos_saude 13 . 113066162 976.77 C T PASS 0/1 103 None None None None None None None None None SPACA7|0.000422564|98.83%
View dados_brutos_saude 13 . 113001902 548.77 C T PASS 0/1 64 None None None None None None None None None None
View dados_brutos_saude 13 . 112859368 930.77 C G PASS 0/1 97 None None None None None None None None None None
View dados_brutos_saude 13 . 112854525 1356.77 G C PASS 0/1 105 None None None None None None None None None None
View dados_brutos_saude 13 . 112836289 645.77 G A PASS 0/1 61 None None None None None None None None None None
View dados_brutos_saude 13 . 112825506 699.77 A G PASS 0|1 111 None None None None None None None None None None
View dados_brutos_saude 13 . 112825499 707.77 G A PASS 0|1 109 None None None None None None None None None None
View dados_brutos_saude 13 . 112824340 1027.77 G C PASS 0/1 94 None None None None None None None None None None
View dados_brutos_saude 13 . 112785272 635.77 G T PASS 0/1 55 None None None None None None None None None None
View dados_brutos_saude 13 . 112399156 1162.77 T A PASS 1/1 36 None None None None None None None None None None
View dados_brutos_saude 13 . 112398074 3755.77 A G PASS 1/1 118 None None None None None None None None None None
View dados_brutos_saude 13 . 112376525 1514.77 G C PASS 0/1 106 None None None None None None None None None None
View dados_brutos_saude 13 . 112376360 1524.77 G A PASS 0/1 124 None None None None None None None None None None
View dados_brutos_saude 13 rs546395837
dbSNP Clinvar
111339967 69.77 A G ABlow 0/1 82 None None None 0.00020 0.00020 None None None None None None CARS2|0.018441874|74.99%
View dados_brutos_saude 13 . 111339941 670.77 C T PASS 0/1 116 None None None None None None None None None CARS2|0.018441874|74.99%
View dados_brutos_saude 13 . 111303118 2753.77 T C PASS 1/1 89 None None None None None None None None None CARS2|0.018441874|74.99%
View dados_brutos_saude 13 . 111301556 706.77 T C PASS 0/1 67 None None None None None None None None None CARS2|0.018441874|74.99%
View dados_brutos_saude 13 . 111241362 1905.77 C T PASS 0/1 180 None None None None None None None None None None
View dados_brutos_saude 13 . 111217690 917.77 T C PASS 0/1 80 None None None None None None None None None None
View dados_brutos_saude 13 . 111153898 670.77 A G PASS 0/1 63 None None None None None None None None None COL4A2|0.044971251|64.22%
View dados_brutos_saude 13 . 110914692 1773.77 G C PASS 1/1 53 None None None None None None None None None COL4A1|0.224151486|33.94%
View dados_brutos_saude 13 . 110715969 1397.77 C T PASS 0/1 118 None None None None None None None None None None
View dados_brutos_saude 13 . 110706141 256.77 G A PASS 0/1 24 None None None None None None None None None None
View dados_brutos_saude 13 . 110705653 845.77 T G PASS 0/1 61 None None None None None None None None None None
View dados_brutos_saude 13 . 110687695 625.77 A C PASS 0/1 87 None None None None None None None None None None
View dados_brutos_saude 13 . 110687678 207.73 CA C PASS 0/1 88 None None None None None None None None None None
View dados_brutos_saude 13 . 110667407 3073.77 T C PASS 1/1 106 None None None None None None None None None None
View dados_brutos_saude 13 . 110646045 1369.77 A G PASS 0/1 132 None None None None None None None None None None
View dados_brutos_saude 13 . 110645957 2471.77 G A PASS 0/1 195 None None None None None None None None None None
View dados_brutos_saude 13 . 110641568 2373.77 T G PASS 0/1 213 None None None None None None None None None None
View dados_brutos_saude 13 . 110641500 1136.77 G A PASS 0/1 103 None None None None None None None None None None
View dados_brutos_saude 13 . 110638533 1230.77 G A PASS 0/1 109 None None None None None None None None None None
View dados_brutos_saude 13 . 110638283 882.77 T C PASS 0/1 85 None None None None None None None None None None
View dados_brutos_saude 13 . 110524046 1727.77 A G PASS 0/1 128 None None None None None None None None None None
View dados_brutos_saude 13 . 110506527 2365.77 A G PASS 0/1 178 None None None None None None None None None None
View dados_brutos_saude 13 . 110504152 4594.77 C T PASS 1/1 151 None None None None None None None None None None
View dados_brutos_saude 13 . 110504064 1540.77 G A PASS 0/1 127 None None None None None None None None None None
View dados_brutos_saude 13 . 110503806 771.77 G A PASS 0/1 51 None None None None None None None None None None
View dados_brutos_saude 13 . 110503432 919.77 G A PASS 0/1 99 None None None None None None None None None None