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 CHR:

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EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES 		DBSNP FREQUENCY

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+ Genes 4

Genes:
EEF1D, OR51V1, PRIM2, TRBV7-6,

+ Genes associated with diseases

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 24
Number of Genes: 4

Export to: CSV
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EEF1D
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View msp09 snp 8 rs4874160
dbSNP Clinvar 		144671244 663.77 C A,G PASS 1/2 20 SYNONYMOUS_CODING LOW None 0.09545 0.64260 0.20869 None None None None None None EEF1D|0.083769043|54.48%

OR51V1
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View msp09 snp 11 rs11512276
dbSNP Clinvar 		5221645 1561.77 C A,G PASS 1/2 47 NON_SYNONYMOUS_CODING MODERATE None 0.27995 0.32090 0.40160 0.10 0.98 None None None None None None OR51V1|0.004653668|86.28%

PRIM2
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View msp09 snp 6 rs77436138
dbSNP Clinvar 		57398226 1321.77 T G,A PASS 1/2 77 NON_SYNONYMOUS_CODING MODERATE None 1.00 0.00 None None None None None None PRIM2|0.188824743|37.96%

TRBV7-6
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View msp09 snp 7 rs73742284
dbSNP Clinvar 		142139348 2176.77 C T,A PASS 1/2 60 NON_SYNONYMOUS_CODING MODERATE None 0.99241 0.99240 0.00788 0.33 0.00 None None None None None None None
Omim - GeneCards - NCBI
Options Individual Chr
 RsId
 Pos
 Qual
 Ref
 Alt
 Filter Gen
 Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View msp09 snp 7 rs2255820
dbSNP Clinvar 		83029639 461.77 A C,T PASS 1/2 15 None None None 0.26458 0.26460 None None None None None None SEMA3E|0.36164343|23.33%
View msp09 snp 18 rs8096115
dbSNP Clinvar 		3112096 388.77 G A,T PASS 1/2 12 None None None 0.34884 0.34880 None None None None None None MYOM1|0.167204206|40.63%
View msp09 snp 3 rs295452
dbSNP Clinvar 		47378467 380.77 A G,T PASS 1/2 12 None None None 0.47624 0.47620 None None None None None None KLHL18|0.213393899|35.18%
View msp09 snp 19 rs10423289
dbSNP Clinvar 		47548327 652.77 A C,T PASS 1/2 20 None None None 0.87580 0.87580 None None None None None None NPAS1|0.050860776|62.41%
View msp09 snp 5 rs383985
dbSNP Clinvar 		180055862 353.77 T C,G PASS 1/2 11 None None None 0.05371 0.05371 0.41372 None None None None None None FLT4|0.206670635|35.92%
View msp09 snp 6 rs5001484
dbSNP Clinvar 		57512711 1100.77 G A,C PASS 1/2 84 None None None None None None None None None PRIM2|0.188824743|37.96%
View msp09 snp 3 rs4974160
dbSNP Clinvar 		56026034 871.77 C G,T PASS 1/2 27 None None None 0.19449 0.19450 0.20279 None None None None None None ERC2|0.996551916|0.71%
View msp09 snp 7 rs13308199
dbSNP Clinvar 		128315588 1521.77 T A,C PASS 1/2 46 None None None 0.21366 0.21370 None None None None None None FAM71F2|0.01865689|74.89%
View msp09 snp 12 rs10783226
dbSNP Clinvar 		48398350 252.77 C A,G PASS 1/2 8 None None None None None None None None None None
View msp09 snp 15 rs2291982
dbSNP Clinvar 		70350457 246.77 C A,G PASS 1/2 8 None None None 0.15196 0.15200 0.33948 None None None None None None TLE3|0.401998175|20.63%
View msp09 snp 16 rs3743842
dbSNP Clinvar 		5058791 250.77 A C,G PASS 1/2 9 None None None 0.18291 0.18290 None None None None None None SEC14L5|0.039278315|66.01%
View msp09 snp 19 rs11084110
dbSNP Clinvar 		52220077 221.77 C G,T PASS 1/2 8 None None None 0.05491 0.05491 None None None None None None HAS1|0.18273667|38.7%
View msp09 snp 2 rs2278786
dbSNP Clinvar 		46203796 873.77 G A,C PASS 1/2 28 None None None 0.18151 0.18150 None None None None None None PRKCE|0.82710928|5.17%
View msp09 snp 7 rs692625
dbSNP Clinvar 		129125750 1592.77 G A,T PASS 1/2 48 None None None 0.11042 0.11040 None None None None None None STRIP2|0.363989761|23.15%
View msp09 snp 10 rs11101751
dbSNP Clinvar 		134884755 620.77 C A,G PASS 1/2 20 None None None 0.11562 0.11560 None None None None None None ADGRA1|0.014136068|77.77%
View msp09 snp 12 rs56110511
dbSNP Clinvar 		1969505 239.77 G A,C PASS 1/2 8 None None None 0.32588 0.32590 None None None None None None CACNA2D4|0.041118037|65.41%
View msp09 snp 16 rs11248947
dbSNP Clinvar 		781787 474.77 C G,T PASS 1/2 15 None None None 0.10184 0.42130 None None None None None None HAGHL|0.005094626|85.69%,NARFL|0.018858569|74.74%
View msp09 snp 17 rs2642157
dbSNP Clinvar 		7630295 489.77 G A,T PASS 1/2 15 None None None 0.14477 0.48000 None None None None None None DNAH2|0.156733349|42.06%
View msp09 snp 1 rs209605
dbSNP Clinvar 		40879808 1963.77 G C,T PASS 1/2 63 None None None 0.10463 0.10460 0.05767 None None None None None None SMAP2|0.44905213|18.19%
View msp09 snp 20 rs2554494
dbSNP Clinvar 		29633916 405.77 G T,A PASS 1/2 15 None None None None None None None None None FRG1B|0.009509512|81.26%
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