SELECT VARIANTS FROM EXCLUDE VARIANTS FROM
INDIVIDUALS:

SNP LIST:
GROUPS:

SAVED GENE LIST:

GENE LIST:
INDIVIDUALS:

EXCLUDE SNP LIST:
EXCLUDE GROUPS:

EXCLUDE SAVED GENE LIST:

EXCLUDE GENE LIST:
SELECT YOUR DISEASES:
OMIM:
CLINICAL GENOMICS DATABASE:
HGMD:
MUTATION TYPE:
CHR:

POS:
VARIANT EFFECT FUNCTIONAL CLASS IMPACT
DBSNP BUILD:


EXCLUDE VARIANTS AT VARISNP
READ DEPTH:

QUAL:
VARIANTS PER GENE:
SHOW ONLY VARIANTS PRESENT IN COMMON GENES BETWEEN ALL THE INDIVIDUALS SELECTED
SHOW ONLY VARIANTS AT EXACTLY SAME POSITION BETWEEN ALL THE INDIVIDUALS SELECTED
EXCLUDE ALL VARIANTS PRESENT IN LATEST DBSNP BUILD
SHOW ONLY VARIANTS PRESENT AT HGMD

FREQUENCIES

1000 GENOMES FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN 1000GENOMES
DBSNP FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN DBSNP
ESP6500 FREQUENCY

EXCLUDE ALL VARIANTS PRESENT IN EXOME SEQUENCING PROJECT

SCORES

SIFT SCORE

EXCLUDE VARIANTS WITHOUT SIFT SCORE
POLYPHEN2 SCORE

EXCLUDE VARIANTS WITHOUT POLYPHEN SCORE
CADD

EXCLUDE VARIANTS WITHOUT CADD SCORE
MCAP

EXCLUDE VARIANTS WITHOUT M-CAP SCORE
OPEN RESULT IN A NEW WINDOW
RESET FILTER | Save Config | Save Analysis

Genes:

Genes at Omim

Genes at Clinical Genomics Database

Genes at HGMD

Summary

Number of Variants: 19
Number of Genes: 0

Export to: CSV
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Omim - GeneCards - NCBI
Options Individual Chr
RsId
Pos
Qual
Ref
Alt
Filter Gen
Read Depth Effect Impact Func Class 1kgenomes dbSNP ESP6500 Sift PP2 CADD M-CAP CLINVAR HI Score
View dxc01 snp 11 rs4078520
dbSNP Clinvar
723429 413.77 C T PASS 0/1 27 MOTIF[MA0139.1:CTCF] MODIFIER None 0.34165 0.34170 None None None None None None EPS8L2|0.009899843|80.93%
View dxc01 snp 15 rs2253603
dbSNP Clinvar
40565055 1830.77 G A PASS 1/1 71 MOTIF[MA0139.1:CTCF] MODIFIER None 0.45447 0.45450 0.42673 None None None None None None PAK6|0.183662894|38.57%
View dxc01 snp 19 rs2301669
dbSNP Clinvar
19453560 238.77 C A PASS 1/1 10 MOTIF[MA0139.1:CTCF] MODIFIER None 0.52436 0.52440 0.42822 None None None None None None MAU2|0.230960956|33.29%
View dxc01 snp 22 rs12484228
dbSNP Clinvar
41939739 751.77 A G PASS 0/1 52 MOTIF[MA0139.1:CTCF] MODIFIER None 0.21086 0.21090 None None None None None None POLR3H|0.335521518|25.1%
View dxc01 snp 2 rs2243805
dbSNP Clinvar
128407499 77.77 G A PASS 0/1 10 MOTIF[MA0139.1:CTCF] MODIFIER None 0.54293 0.54290 None None None None None None LIMS2|0.178462666|39.21%,GPR17|0.126816892|46.37%
View dxc01 snp 7 rs190386753
dbSNP Clinvar
158930800 339.77 C T PASS 0/1 22 MOTIF[MA0139.1:CTCF] MODIFIER None 0.00280 0.00280 None None None None None None VIPR2|0.020693978|73.84%
View dxc01 snp 9 rs17250680
dbSNP Clinvar
139820363 418.77 A G PASS 0/1 35 MOTIF[MA0139.1:CTCF] MODIFIER None 0.03055 0.03055 0.04290 None None None None None None TRAF2|0.106243401|49.93%
View dxc01 snp 10 rs41277992
dbSNP Clinvar
72294100 334.77 C T PASS 0/1 25 MOTIF[MA0139.1:CTCF] MODIFIER None 0.10004 0.10000 None None None None None None PALD1|0.038632473|66.24%
View dxc01 snp 11 rs575375
dbSNP Clinvar
64535357 908.77 T C PASS 1/1 35 MOTIF[MA0139.1:CTCF] MODIFIER None 0.96865 0.96870 0.03041 None None None None None None SF1|0.639225523|10.49%
View dxc01 snp 11 rs11227495
dbSNP Clinvar
66263243 724.77 C T PASS 1/1 27 MOTIF[MA0139.1:CTCF] MODIFIER None 0.21246 0.21250 0.19181 None None None None None None DPP3|0.287233243|28.56%
View dxc01 snp 13 rs9535292
dbSNP Clinvar
50244041 567.77 T C PASS 0/1 59 MOTIF[MA0139.1:CTCF] MODIFIER None 0.61062 0.61060 0.37188 None None None None None None EBPL|0.026484478|71.13%
View dxc01 snp 14 rs11847538
dbSNP Clinvar
106877519 113.77 A G PASS 0/1 21 MOTIF[MA0139.1:CTCF] MODIFIER None 0.27875 0.27880 None None None None None None None
View dxc01 snp 14 rs73367258
dbSNP Clinvar
106877535 120.77 C G PASS 0/1 18 MOTIF[MA0139.1:CTCF] MODIFIER None 0.05351 0.05351 None None None None None None None
View dxc01 snp 17 rs2189336
dbSNP Clinvar
5326162 1790.77 G A PASS 1/1 41 MOTIF[MA0139.1:CTCF] MODIFIER None 0.77875 0.77880 0.39428 None None None None None None RPAIN|0.023237381|72.57%
View dxc01 snp 17 rs820387
dbSNP Clinvar
73746146 1306.77 T C PASS 1/1 46 MOTIF[MA0139.1:CTCF] MODIFIER None 0.74062 0.74060 0.21313 None None None None None None ITGB4|0.346553835|24.38%
View dxc01 snp 19 rs10432306
dbSNP Clinvar
5892743 234.77 C T PASS 0/1 18 MOTIF[MA0139.1:CTCF] MODIFIER None 0.41274 0.41270 None None None None None None FUT5|0.001156471|94.68%,NDUFA11|0.003107133|88.49%
View dxc01 snp 19 rs1631032
dbSNP Clinvar
5892770 222.77 C T PASS 0/1 23 MOTIF[MA0139.1:CTCF] MODIFIER None 0.58586 0.58590 None None None None None None FUT5|0.001156471|94.68%,NDUFA11|0.003107133|88.49%
View dxc01 snp 21 rs56145149
dbSNP Clinvar
43696999 451.77 C T PASS 0/1 44 MOTIF[MA0139.1:CTCF] MODIFIER None 0.07648 0.07648 0.03352 None None None None None None ABCG1|0.367260015|22.94%
View dxc01 snp 22 rs2071734
dbSNP Clinvar
36682706 254.77 C T PASS 0/1 30 MOTIF[MA0139.1:CTCF] MODIFIER None 0.04014 0.04014 None None None None None None MYH9|0.668562251|9.42%
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